-- dump date 20140618_184048 -- class Genbank::Contig -- table contig_comment -- id comment NC_014378.1 PROVISIONAL REFSEQ: This record has not yet been subject to finalPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105.PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.govPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at thePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ)PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de)PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org)PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGFPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANLPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGFPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for thePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by thePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of thisPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborativePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START##PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaeaPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Acetohalobium arabaticum Z-7288, DSM 5501PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Acetohalobium arabaticum Z-7288, DSM 5501 collection_date :: MissingPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Acetohalobium arabaticum Z-7288, DSM 5501 collection_date :: Missing lat_lon :: MissingPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Acetohalobium arabaticum Z-7288, DSM 5501 collection_date :: Missing lat_lon :: Missing depth :: MissingPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Acetohalobium arabaticum Z-7288, DSM 5501 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: MissingPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Acetohalobium arabaticum Z-7288, DSM 5501 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: RussiaPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Acetohalobium arabaticum Z-7288, DSM 5501 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Fresh waterPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Acetohalobium arabaticum Z-7288, DSM 5501 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Fresh water num_replicons :: 1PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Acetohalobium arabaticum Z-7288, DSM 5501 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Fresh water num_replicons :: 1 ref_biomaterial :: DSM 5501, ATCC 49924PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Acetohalobium arabaticum Z-7288, DSM 5501 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Fresh water num_replicons :: 1 ref_biomaterial :: DSM 5501, ATCC 49924 biotic_relationship :: Free livingPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Acetohalobium arabaticum Z-7288, DSM 5501 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Fresh water num_replicons :: 1 ref_biomaterial :: DSM 5501, ATCC 49924 biotic_relationship :: Free living trophic_level :: Chemolithotroph, Methylotroph, OrganotrophPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Acetohalobium arabaticum Z-7288, DSM 5501 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Fresh water num_replicons :: 1 ref_biomaterial :: DSM 5501, ATCC 49924 biotic_relationship :: Free living trophic_level :: Chemolithotroph, Methylotroph, Organotroph rel_to_oxygen :: AnaerobePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Acetohalobium arabaticum Z-7288, DSM 5501 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Fresh water num_replicons :: 1 ref_biomaterial :: DSM 5501, ATCC 49924 biotic_relationship :: Free living trophic_level :: Chemolithotroph, Methylotroph, Organotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: MissingPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Acetohalobium arabaticum Z-7288, DSM 5501 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Fresh water num_replicons :: 1 ref_biomaterial :: DSM 5501, ATCC 49924 biotic_relationship :: Free living trophic_level :: Chemolithotroph, Methylotroph, Organotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-FLX, 454-Titanium, IlluminaPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Acetohalobium arabaticum Z-7288, DSM 5501 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Fresh water num_replicons :: 1 ref_biomaterial :: DSM 5501, ATCC 49924 biotic_relationship :: Free living trophic_level :: Chemolithotroph, Methylotroph, Organotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-FLX, 454-Titanium, Illumina assembly :: Newbler v. 2.0.00.20PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Acetohalobium arabaticum Z-7288, DSM 5501 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Fresh water num_replicons :: 1 ref_biomaterial :: DSM 5501, ATCC 49924 biotic_relationship :: Free living trophic_level :: Chemolithotroph, Methylotroph, Organotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-FLX, 454-Titanium, Illumina assembly :: Newbler v. 2.0.00.20 finishing_strategy :: FinishedPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Acetohalobium arabaticum Z-7288, DSM 5501 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Fresh water num_replicons :: 1 ref_biomaterial :: DSM 5501, ATCC 49924 biotic_relationship :: Free living trophic_level :: Chemolithotroph, Methylotroph, Organotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-FLX, 454-Titanium, Illumina assembly :: Newbler v. 2.0.00.20 finishing_strategy :: Finished GOLD Stamp ID :: Gi02906PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Acetohalobium arabaticum Z-7288, DSM 5501 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Fresh water num_replicons :: 1 ref_biomaterial :: DSM 5501, ATCC 49924 biotic_relationship :: Free living trophic_level :: Chemolithotroph, Methylotroph, Organotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-FLX, 454-Titanium, Illumina assembly :: Newbler v. 2.0.00.20 finishing_strategy :: Finished GOLD Stamp ID :: Gi02906 Type Strain :: YesPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Acetohalobium arabaticum Z-7288, DSM 5501 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Fresh water num_replicons :: 1 ref_biomaterial :: DSM 5501, ATCC 49924 biotic_relationship :: Free living trophic_level :: Chemolithotroph, Methylotroph, Organotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-FLX, 454-Titanium, Illumina assembly :: Newbler v. 2.0.00.20 finishing_strategy :: Finished GOLD Stamp ID :: Gi02906 Type Strain :: Yes Greengenes ID :: 14306PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Acetohalobium arabaticum Z-7288, DSM 5501 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Fresh water num_replicons :: 1 ref_biomaterial :: DSM 5501, ATCC 49924 biotic_relationship :: Free living trophic_level :: Chemolithotroph, Methylotroph, Organotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-FLX, 454-Titanium, Illumina assembly :: Newbler v. 2.0.00.20 finishing_strategy :: Finished GOLD Stamp ID :: Gi02906 Type Strain :: Yes Greengenes ID :: 14306 Funding Program :: DOE-GEBA 2007PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Acetohalobium arabaticum Z-7288, DSM 5501 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Fresh water num_replicons :: 1 ref_biomaterial :: DSM 5501, ATCC 49924 biotic_relationship :: Free living trophic_level :: Chemolithotroph, Methylotroph, Organotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-FLX, 454-Titanium, Illumina assembly :: Newbler v. 2.0.00.20 finishing_strategy :: Finished GOLD Stamp ID :: Gi02906 Type Strain :: Yes Greengenes ID :: 14306 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMPPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Acetohalobium arabaticum Z-7288, DSM 5501 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Fresh water num_replicons :: 1 ref_biomaterial :: DSM 5501, ATCC 49924 biotic_relationship :: Free living trophic_level :: Chemolithotroph, Methylotroph, Organotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-FLX, 454-Titanium, Illumina assembly :: Newbler v. 2.0.00.20 finishing_strategy :: Finished GOLD Stamp ID :: Gi02906 Type Strain :: Yes Greengenes ID :: 14306 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: "Lagoons from East Crimea, Arabat spit,PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Acetohalobium arabaticum Z-7288, DSM 5501 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Fresh water num_replicons :: 1 ref_biomaterial :: DSM 5501, ATCC 49924 biotic_relationship :: Free living trophic_level :: Chemolithotroph, Methylotroph, Organotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-FLX, 454-Titanium, Illumina assembly :: Newbler v. 2.0.00.20 finishing_strategy :: Finished GOLD Stamp ID :: Gi02906 Type Strain :: Yes Greengenes ID :: 14306 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: "Lagoons from East Crimea, Arabat spit, USSR"PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Acetohalobium arabaticum Z-7288, DSM 5501 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Fresh water num_replicons :: 1 ref_biomaterial :: DSM 5501, ATCC 49924 biotic_relationship :: Free living trophic_level :: Chemolithotroph, Methylotroph, Organotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-FLX, 454-Titanium, Illumina assembly :: Newbler v. 2.0.00.20 finishing_strategy :: Finished GOLD Stamp ID :: Gi02906 Type Strain :: Yes Greengenes ID :: 14306 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: "Lagoons from East Crimea, Arabat spit, USSR" Temperature Range :: MesophilePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Acetohalobium arabaticum Z-7288, DSM 5501 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Fresh water num_replicons :: 1 ref_biomaterial :: DSM 5501, ATCC 49924 biotic_relationship :: Free living trophic_level :: Chemolithotroph, Methylotroph, Organotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-FLX, 454-Titanium, Illumina assembly :: Newbler v. 2.0.00.20 finishing_strategy :: Finished GOLD Stamp ID :: Gi02906 Type Strain :: Yes Greengenes ID :: 14306 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: "Lagoons from East Crimea, Arabat spit, USSR" Temperature Range :: Mesophile Temperature Optimum :: 37CPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Acetohalobium arabaticum Z-7288, DSM 5501 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Fresh water num_replicons :: 1 ref_biomaterial :: DSM 5501, ATCC 49924 biotic_relationship :: Free living trophic_level :: Chemolithotroph, Methylotroph, Organotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-FLX, 454-Titanium, Illumina assembly :: Newbler v. 2.0.00.20 finishing_strategy :: Finished GOLD Stamp ID :: Gi02906 Type Strain :: Yes Greengenes ID :: 14306 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: "Lagoons from East Crimea, Arabat spit, USSR" Temperature Range :: Mesophile Temperature Optimum :: 37C Salinity :: HalophilePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Acetohalobium arabaticum Z-7288, DSM 5501 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Fresh water num_replicons :: 1 ref_biomaterial :: DSM 5501, ATCC 49924 biotic_relationship :: Free living trophic_level :: Chemolithotroph, Methylotroph, Organotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-FLX, 454-Titanium, Illumina assembly :: Newbler v. 2.0.00.20 finishing_strategy :: Finished GOLD Stamp ID :: Gi02906 Type Strain :: Yes Greengenes ID :: 14306 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: "Lagoons from East Crimea, Arabat spit, USSR" Temperature Range :: Mesophile Temperature Optimum :: 37C Salinity :: Halophile Gram Staining :: Gram+PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Acetohalobium arabaticum Z-7288, DSM 5501 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Fresh water num_replicons :: 1 ref_biomaterial :: DSM 5501, ATCC 49924 biotic_relationship :: Free living trophic_level :: Chemolithotroph, Methylotroph, Organotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-FLX, 454-Titanium, Illumina assembly :: Newbler v. 2.0.00.20 finishing_strategy :: Finished GOLD Stamp ID :: Gi02906 Type Strain :: Yes Greengenes ID :: 14306 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: "Lagoons from East Crimea, Arabat spit, USSR" Temperature Range :: Mesophile Temperature Optimum :: 37C Salinity :: Halophile Gram Staining :: Gram+ Diseases :: NonePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Acetohalobium arabaticum Z-7288, DSM 5501 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Fresh water num_replicons :: 1 ref_biomaterial :: DSM 5501, ATCC 49924 biotic_relationship :: Free living trophic_level :: Chemolithotroph, Methylotroph, Organotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-FLX, 454-Titanium, Illumina assembly :: Newbler v. 2.0.00.20 finishing_strategy :: Finished GOLD Stamp ID :: Gi02906 Type Strain :: Yes Greengenes ID :: 14306 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: "Lagoons from East Crimea, Arabat spit, USSR" Temperature Range :: Mesophile Temperature Optimum :: 37C Salinity :: Halophile Gram Staining :: Gram+ Diseases :: None ##MIGS-Data-END##PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Acetohalobium arabaticum Z-7288, DSM 5501 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Fresh water num_replicons :: 1 ref_biomaterial :: DSM 5501, ATCC 49924 biotic_relationship :: Free living trophic_level :: Chemolithotroph, Methylotroph, Organotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-FLX, 454-Titanium, Illumina assembly :: Newbler v. 2.0.00.20 finishing_strategy :: Finished GOLD Stamp ID :: Gi02906 Type Strain :: Yes Greengenes ID :: 14306 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: "Lagoons from East Crimea, Arabat spit, USSR" Temperature Range :: Mesophile Temperature Optimum :: 37C Salinity :: Halophile Gram Staining :: Gram+ Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START##PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Acetohalobium arabaticum Z-7288, DSM 5501 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Fresh water num_replicons :: 1 ref_biomaterial :: DSM 5501, ATCC 49924 biotic_relationship :: Free living trophic_level :: Chemolithotroph, Methylotroph, Organotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-FLX, 454-Titanium, Illumina assembly :: Newbler v. 2.0.00.20 finishing_strategy :: Finished GOLD Stamp ID :: Gi02906 Type Strain :: Yes Greengenes ID :: 14306 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: "Lagoons from East Crimea, Arabat spit, USSR" Temperature Range :: Mesophile Temperature Optimum :: 37C Salinity :: Halophile Gram Staining :: Gram+ Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: FinishedPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Acetohalobium arabaticum Z-7288, DSM 5501 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Fresh water num_replicons :: 1 ref_biomaterial :: DSM 5501, ATCC 49924 biotic_relationship :: Free living trophic_level :: Chemolithotroph, Methylotroph, Organotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-FLX, 454-Titanium, Illumina assembly :: Newbler v. 2.0.00.20 finishing_strategy :: Finished GOLD Stamp ID :: Gi02906 Type Strain :: Yes Greengenes ID :: 14306 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: "Lagoons from East Crimea, Arabat spit, USSR" Temperature Range :: Mesophile Temperature Optimum :: 37C Salinity :: Halophile Gram Staining :: Gram+ Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: FinishedPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Acetohalobium arabaticum Z-7288, DSM 5501 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Fresh water num_replicons :: 1 ref_biomaterial :: DSM 5501, ATCC 49924 biotic_relationship :: Free living trophic_level :: Chemolithotroph, Methylotroph, Organotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-FLX, 454-Titanium, Illumina assembly :: Newbler v. 2.0.00.20 finishing_strategy :: Finished GOLD Stamp ID :: Gi02906 Type Strain :: Yes Greengenes ID :: 14306 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: "Lagoons from East Crimea, Arabat spit, USSR" Temperature Range :: Mesophile Temperature Optimum :: 37C Salinity :: Halophile Gram Staining :: Gram+ Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.0.00.20PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Acetohalobium arabaticum Z-7288, DSM 5501 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Fresh water num_replicons :: 1 ref_biomaterial :: DSM 5501, ATCC 49924 biotic_relationship :: Free living trophic_level :: Chemolithotroph, Methylotroph, Organotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-FLX, 454-Titanium, Illumina assembly :: Newbler v. 2.0.00.20 finishing_strategy :: Finished GOLD Stamp ID :: Gi02906 Type Strain :: Yes Greengenes ID :: 14306 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: "Lagoons from East Crimea, Arabat spit, USSR" Temperature Range :: Mesophile Temperature Optimum :: 37C Salinity :: Halophile Gram Staining :: Gram+ Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.0.00.20 Genome Coverage :: 37x 454-TitaniumPEPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Acetohalobium arabaticum Z-7288, DSM 5501 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Fresh water num_replicons :: 1 ref_biomaterial :: DSM 5501, ATCC 49924 biotic_relationship :: Free living trophic_level :: Chemolithotroph, Methylotroph, Organotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-FLX, 454-Titanium, Illumina assembly :: Newbler v. 2.0.00.20 finishing_strategy :: Finished GOLD Stamp ID :: Gi02906 Type Strain :: Yes Greengenes ID :: 14306 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: "Lagoons from East Crimea, Arabat spit, USSR" Temperature Range :: Mesophile Temperature Optimum :: 37C Salinity :: Halophile Gram Staining :: Gram+ Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.0.00.20 Genome Coverage :: 37x 454-TitaniumPE Sequencing Technology :: 454-FLX, 454-Titanium, IlluminaPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Acetohalobium arabaticum Z-7288, DSM 5501 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Fresh water num_replicons :: 1 ref_biomaterial :: DSM 5501, ATCC 49924 biotic_relationship :: Free living trophic_level :: Chemolithotroph, Methylotroph, Organotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-FLX, 454-Titanium, Illumina assembly :: Newbler v. 2.0.00.20 finishing_strategy :: Finished GOLD Stamp ID :: Gi02906 Type Strain :: Yes Greengenes ID :: 14306 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: "Lagoons from East Crimea, Arabat spit, USSR" Temperature Range :: Mesophile Temperature Optimum :: 37C Salinity :: Halophile Gram Staining :: Gram+ Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.0.00.20 Genome Coverage :: 37x 454-TitaniumPE Sequencing Technology :: 454-FLX, 454-Titanium, Illumina ##Genome-Assembly-Data-END##PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002105. URL -- http://www.jgi.doe.gov JGI Project ID: 4085568 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Acetohalobium arabaticum Z-7288, DSM 5501 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Russia environment :: Fresh water num_replicons :: 1 ref_biomaterial :: DSM 5501, ATCC 49924 biotic_relationship :: Free living trophic_level :: Chemolithotroph, Methylotroph, Organotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: 454-FLX, 454-Titanium, Illumina assembly :: Newbler v. 2.0.00.20 finishing_strategy :: Finished GOLD Stamp ID :: Gi02906 Type Strain :: Yes Greengenes ID :: 14306 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: "Lagoons from East Crimea, Arabat spit, USSR" Temperature Range :: Mesophile Temperature Optimum :: 37C Salinity :: Halophile Gram Staining :: Gram+ Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.0.00.20 Genome Coverage :: 37x 454-TitaniumPE Sequencing Technology :: 454-FLX, 454-Titanium, Illumina ##Genome-Assembly-Data-END## COMPLETENESS: full length.