-- dump date 20140618_184716 -- class Genbank::Contig -- table contig_comment -- id comment NC_013124.1 PROVISIONAL REFSEQ: This record has not yet been subject to finalPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001631.PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001631. URL -- http://www.jgi.doe.govPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001631. URL -- http://www.jgi.doe.gov JGI Project ID: 4083228PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001631. URL -- http://www.jgi.doe.gov JGI Project ID: 4083228 Source DNA and organism available from Hans-Peter Klenk at thePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001631. URL -- http://www.jgi.doe.gov JGI Project ID: 4083228 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ)PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001631. URL -- http://www.jgi.doe.gov JGI Project ID: 4083228 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de)PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001631. URL -- http://www.jgi.doe.gov JGI Project ID: 4083228 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001631. URL -- http://www.jgi.doe.gov JGI Project ID: 4083228 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org)PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001631. URL -- http://www.jgi.doe.gov JGI Project ID: 4083228 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGFPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001631. URL -- http://www.jgi.doe.gov JGI Project ID: 4083228 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGFPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001631. URL -- http://www.jgi.doe.gov JGI Project ID: 4083228 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Annotation by JGI-ORNL and JGI-PGFPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001631. URL -- http://www.jgi.doe.gov JGI Project ID: 4083228 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for thePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001631. URL -- http://www.jgi.doe.gov JGI Project ID: 4083228 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by thePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001631. URL -- http://www.jgi.doe.gov JGI Project ID: 4083228 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001631. URL -- http://www.jgi.doe.gov JGI Project ID: 4083228 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of thisPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001631. URL -- http://www.jgi.doe.gov JGI Project ID: 4083228 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborativePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001631. URL -- http://www.jgi.doe.gov JGI Project ID: 4083228 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001631. URL -- http://www.jgi.doe.gov JGI Project ID: 4083228 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001631. URL -- http://www.jgi.doe.gov JGI Project ID: 4083228 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START##PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001631. URL -- http://www.jgi.doe.gov JGI Project ID: 4083228 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Acidimicrobium ferrooxidans ICP, DSM 10331PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001631. URL -- http://www.jgi.doe.gov JGI Project ID: 4083228 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Acidimicrobium ferrooxidans ICP, DSM 10331 Culture Collection ID :: DSM 10331PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001631. URL -- http://www.jgi.doe.gov JGI Project ID: 4083228 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Acidimicrobium ferrooxidans ICP, DSM 10331 Culture Collection ID :: DSM 10331 GOLD Stamp ID :: Gc01023PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001631. URL -- http://www.jgi.doe.gov JGI Project ID: 4083228 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Acidimicrobium ferrooxidans ICP, DSM 10331 Culture Collection ID :: DSM 10331 GOLD Stamp ID :: Gc01023 Funding Program :: DOE-GEBA 2007PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001631. URL -- http://www.jgi.doe.gov JGI Project ID: 4083228 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Acidimicrobium ferrooxidans ICP, DSM 10331 Culture Collection ID :: DSM 10331 GOLD Stamp ID :: Gc01023 Funding Program :: DOE-GEBA 2007 Assembly Method :: Newbler, ArachnePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001631. URL -- http://www.jgi.doe.gov JGI Project ID: 4083228 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Acidimicrobium ferrooxidans ICP, DSM 10331 Culture Collection ID :: DSM 10331 GOLD Stamp ID :: Gc01023 Funding Program :: DOE-GEBA 2007 Assembly Method :: Newbler, Arachne Sequencing Depth :: 6.8x Sanger; 52.9x pyrosequencePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001631. URL -- http://www.jgi.doe.gov JGI Project ID: 4083228 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Acidimicrobium ferrooxidans ICP, DSM 10331 Culture Collection ID :: DSM 10331 GOLD Stamp ID :: Gc01023 Funding Program :: DOE-GEBA 2007 Assembly Method :: Newbler, Arachne Sequencing Depth :: 6.8x Sanger; 52.9x pyrosequence Gene Calling Method :: ProdigalPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001631. URL -- http://www.jgi.doe.gov JGI Project ID: 4083228 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Acidimicrobium ferrooxidans ICP, DSM 10331 Culture Collection ID :: DSM 10331 GOLD Stamp ID :: Gc01023 Funding Program :: DOE-GEBA 2007 Assembly Method :: Newbler, Arachne Sequencing Depth :: 6.8x Sanger; 52.9x pyrosequence Gene Calling Method :: Prodigal Isolation Site :: Hot spring run-off in IcelandPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001631. URL -- http://www.jgi.doe.gov JGI Project ID: 4083228 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Acidimicrobium ferrooxidans ICP, DSM 10331 Culture Collection ID :: DSM 10331 GOLD Stamp ID :: Gc01023 Funding Program :: DOE-GEBA 2007 Assembly Method :: Newbler, Arachne Sequencing Depth :: 6.8x Sanger; 52.9x pyrosequence Gene Calling Method :: Prodigal Isolation Site :: Hot spring run-off in Iceland Collection Date :: before 1993PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001631. URL -- http://www.jgi.doe.gov JGI Project ID: 4083228 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Acidimicrobium ferrooxidans ICP, DSM 10331 Culture Collection ID :: DSM 10331 GOLD Stamp ID :: Gc01023 Funding Program :: DOE-GEBA 2007 Assembly Method :: Newbler, Arachne Sequencing Depth :: 6.8x Sanger; 52.9x pyrosequence Gene Calling Method :: Prodigal Isolation Site :: Hot spring run-off in Iceland Collection Date :: before 1993 Isolation Country :: IcelandPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001631. URL -- http://www.jgi.doe.gov JGI Project ID: 4083228 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Acidimicrobium ferrooxidans ICP, DSM 10331 Culture Collection ID :: DSM 10331 GOLD Stamp ID :: Gc01023 Funding Program :: DOE-GEBA 2007 Assembly Method :: Newbler, Arachne Sequencing Depth :: 6.8x Sanger; 52.9x pyrosequence Gene Calling Method :: Prodigal Isolation Site :: Hot spring run-off in Iceland Collection Date :: before 1993 Isolation Country :: Iceland Latitude :: 63.93PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001631. URL -- http://www.jgi.doe.gov JGI Project ID: 4083228 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Acidimicrobium ferrooxidans ICP, DSM 10331 Culture Collection ID :: DSM 10331 GOLD Stamp ID :: Gc01023 Funding Program :: DOE-GEBA 2007 Assembly Method :: Newbler, Arachne Sequencing Depth :: 6.8x Sanger; 52.9x pyrosequence Gene Calling Method :: Prodigal Isolation Site :: Hot spring run-off in Iceland Collection Date :: before 1993 Isolation Country :: Iceland Latitude :: 63.93 Longitude :: -22.1PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001631. URL -- http://www.jgi.doe.gov JGI Project ID: 4083228 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Acidimicrobium ferrooxidans ICP, DSM 10331 Culture Collection ID :: DSM 10331 GOLD Stamp ID :: Gc01023 Funding Program :: DOE-GEBA 2007 Assembly Method :: Newbler, Arachne Sequencing Depth :: 6.8x Sanger; 52.9x pyrosequence Gene Calling Method :: Prodigal Isolation Site :: Hot spring run-off in Iceland Collection Date :: before 1993 Isolation Country :: Iceland Latitude :: 63.93 Longitude :: -22.1 Oxygen Requirement :: AerobePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001631. URL -- http://www.jgi.doe.gov JGI Project ID: 4083228 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Acidimicrobium ferrooxidans ICP, DSM 10331 Culture Collection ID :: DSM 10331 GOLD Stamp ID :: Gc01023 Funding Program :: DOE-GEBA 2007 Assembly Method :: Newbler, Arachne Sequencing Depth :: 6.8x Sanger; 52.9x pyrosequence Gene Calling Method :: Prodigal Isolation Site :: Hot spring run-off in Iceland Collection Date :: before 1993 Isolation Country :: Iceland Latitude :: 63.93 Longitude :: -22.1 Oxygen Requirement :: Aerobe Cell Shape :: Rod-shapedPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001631. URL -- http://www.jgi.doe.gov JGI Project ID: 4083228 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Acidimicrobium ferrooxidans ICP, DSM 10331 Culture Collection ID :: DSM 10331 GOLD Stamp ID :: Gc01023 Funding Program :: DOE-GEBA 2007 Assembly Method :: Newbler, Arachne Sequencing Depth :: 6.8x Sanger; 52.9x pyrosequence Gene Calling Method :: Prodigal Isolation Site :: Hot spring run-off in Iceland Collection Date :: before 1993 Isolation Country :: Iceland Latitude :: 63.93 Longitude :: -22.1 Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: MotilePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001631. URL -- http://www.jgi.doe.gov JGI Project ID: 4083228 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Acidimicrobium ferrooxidans ICP, DSM 10331 Culture Collection ID :: DSM 10331 GOLD Stamp ID :: Gc01023 Funding Program :: DOE-GEBA 2007 Assembly Method :: Newbler, Arachne Sequencing Depth :: 6.8x Sanger; 52.9x pyrosequence Gene Calling Method :: Prodigal Isolation Site :: Hot spring run-off in Iceland Collection Date :: before 1993 Isolation Country :: Iceland Latitude :: 63.93 Longitude :: -22.1 Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: NonsporulatingPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001631. URL -- http://www.jgi.doe.gov JGI Project ID: 4083228 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Acidimicrobium ferrooxidans ICP, DSM 10331 Culture Collection ID :: DSM 10331 GOLD Stamp ID :: Gc01023 Funding Program :: DOE-GEBA 2007 Assembly Method :: Newbler, Arachne Sequencing Depth :: 6.8x Sanger; 52.9x pyrosequence Gene Calling Method :: Prodigal Isolation Site :: Hot spring run-off in Iceland Collection Date :: before 1993 Isolation Country :: Iceland Latitude :: 63.93 Longitude :: -22.1 Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: ThermophilePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001631. URL -- http://www.jgi.doe.gov JGI Project ID: 4083228 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Acidimicrobium ferrooxidans ICP, DSM 10331 Culture Collection ID :: DSM 10331 GOLD Stamp ID :: Gc01023 Funding Program :: DOE-GEBA 2007 Assembly Method :: Newbler, Arachne Sequencing Depth :: 6.8x Sanger; 52.9x pyrosequence Gene Calling Method :: Prodigal Isolation Site :: Hot spring run-off in Iceland Collection Date :: before 1993 Isolation Country :: Iceland Latitude :: 63.93 Longitude :: -22.1 Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Thermophile Temperature Optimum :: 48CPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001631. URL -- http://www.jgi.doe.gov JGI Project ID: 4083228 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Acidimicrobium ferrooxidans ICP, DSM 10331 Culture Collection ID :: DSM 10331 GOLD Stamp ID :: Gc01023 Funding Program :: DOE-GEBA 2007 Assembly Method :: Newbler, Arachne Sequencing Depth :: 6.8x Sanger; 52.9x pyrosequence Gene Calling Method :: Prodigal Isolation Site :: Hot spring run-off in Iceland Collection Date :: before 1993 Isolation Country :: Iceland Latitude :: 63.93 Longitude :: -22.1 Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Thermophile Temperature Optimum :: 48C Gram Staining :: gram+PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001631. URL -- http://www.jgi.doe.gov JGI Project ID: 4083228 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Acidimicrobium ferrooxidans ICP, DSM 10331 Culture Collection ID :: DSM 10331 GOLD Stamp ID :: Gc01023 Funding Program :: DOE-GEBA 2007 Assembly Method :: Newbler, Arachne Sequencing Depth :: 6.8x Sanger; 52.9x pyrosequence Gene Calling Method :: Prodigal Isolation Site :: Hot spring run-off in Iceland Collection Date :: before 1993 Isolation Country :: Iceland Latitude :: 63.93 Longitude :: -22.1 Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Thermophile Temperature Optimum :: 48C Gram Staining :: gram+ Biotic Relationship :: Free livingPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001631. URL -- http://www.jgi.doe.gov JGI Project ID: 4083228 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Acidimicrobium ferrooxidans ICP, DSM 10331 Culture Collection ID :: DSM 10331 GOLD Stamp ID :: Gc01023 Funding Program :: DOE-GEBA 2007 Assembly Method :: Newbler, Arachne Sequencing Depth :: 6.8x Sanger; 52.9x pyrosequence Gene Calling Method :: Prodigal Isolation Site :: Hot spring run-off in Iceland Collection Date :: before 1993 Isolation Country :: Iceland Latitude :: 63.93 Longitude :: -22.1 Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Thermophile Temperature Optimum :: 48C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: NonePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001631. URL -- http://www.jgi.doe.gov JGI Project ID: 4083228 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Acidimicrobium ferrooxidans ICP, DSM 10331 Culture Collection ID :: DSM 10331 GOLD Stamp ID :: Gc01023 Funding Program :: DOE-GEBA 2007 Assembly Method :: Newbler, Arachne Sequencing Depth :: 6.8x Sanger; 52.9x pyrosequence Gene Calling Method :: Prodigal Isolation Site :: Hot spring run-off in Iceland Collection Date :: before 1993 Isolation Country :: Iceland Latitude :: 63.93 Longitude :: -22.1 Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Thermophile Temperature Optimum :: 48C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Fresh waterPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001631. URL -- http://www.jgi.doe.gov JGI Project ID: 4083228 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Acidimicrobium ferrooxidans ICP, DSM 10331 Culture Collection ID :: DSM 10331 GOLD Stamp ID :: Gc01023 Funding Program :: DOE-GEBA 2007 Assembly Method :: Newbler, Arachne Sequencing Depth :: 6.8x Sanger; 52.9x pyrosequence Gene Calling Method :: Prodigal Isolation Site :: Hot spring run-off in Iceland Collection Date :: before 1993 Isolation Country :: Iceland Latitude :: 63.93 Longitude :: -22.1 Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Thermophile Temperature Optimum :: 48C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Fresh water Phenotypes :: Acidophile, Iron oxidizerPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001631. URL -- http://www.jgi.doe.gov JGI Project ID: 4083228 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Acidimicrobium ferrooxidans ICP, DSM 10331 Culture Collection ID :: DSM 10331 GOLD Stamp ID :: Gc01023 Funding Program :: DOE-GEBA 2007 Assembly Method :: Newbler, Arachne Sequencing Depth :: 6.8x Sanger; 52.9x pyrosequence Gene Calling Method :: Prodigal Isolation Site :: Hot spring run-off in Iceland Collection Date :: before 1993 Isolation Country :: Iceland Latitude :: 63.93 Longitude :: -22.1 Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Thermophile Temperature Optimum :: 48C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Fresh water Phenotypes :: Acidophile, Iron oxidizer Energy Source :: AutotrophPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001631. URL -- http://www.jgi.doe.gov JGI Project ID: 4083228 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Acidimicrobium ferrooxidans ICP, DSM 10331 Culture Collection ID :: DSM 10331 GOLD Stamp ID :: Gc01023 Funding Program :: DOE-GEBA 2007 Assembly Method :: Newbler, Arachne Sequencing Depth :: 6.8x Sanger; 52.9x pyrosequence Gene Calling Method :: Prodigal Isolation Site :: Hot spring run-off in Iceland Collection Date :: before 1993 Isolation Country :: Iceland Latitude :: 63.93 Longitude :: -22.1 Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Thermophile Temperature Optimum :: 48C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Fresh water Phenotypes :: Acidophile, Iron oxidizer Energy Source :: Autotroph ##Metadata-END##PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP001631. URL -- http://www.jgi.doe.gov JGI Project ID: 4083228 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-PGF Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## Organism Display Name :: Acidimicrobium ferrooxidans ICP, DSM 10331 Culture Collection ID :: DSM 10331 GOLD Stamp ID :: Gc01023 Funding Program :: DOE-GEBA 2007 Assembly Method :: Newbler, Arachne Sequencing Depth :: 6.8x Sanger; 52.9x pyrosequence Gene Calling Method :: Prodigal Isolation Site :: Hot spring run-off in Iceland Collection Date :: before 1993 Isolation Country :: Iceland Latitude :: 63.93 Longitude :: -22.1 Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Thermophile Temperature Optimum :: 48C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None Habitat :: Fresh water Phenotypes :: Acidophile, Iron oxidizer Energy Source :: Autotroph ##Metadata-END## COMPLETENESS: full length.