-- dump date 20140618_185142 -- class Genbank::CDS -- table cds_note -- id note YP_002753154.1 YkgG family protein AMBIGUITY; this gene contains a premature stop which is not the result of sequencing error; identified by match to protein family HMM PF02589 YP_002753155.1 identified by match to protein family HMM PF00037; match to protein family HMM PF02589; match to protein family HMM TIGR00273 YP_002753156.1 identified by match to protein family HMM PF02754 YP_002753157.1 identified by glimmer; putative YP_002753158.1 identified by glimmer; putative YP_002753159.1 identified by glimmer; putative YP_002753160.1 identified by glimmer; putative YP_002753161.1 identified by glimmer; putative YP_002753162.1 identified by match to protein family HMM PF06824; match to protein family HMM TIGR01409 YP_002753163.1 identified by match to protein family HMM PF07971; match to protein family HMM TIGR01180; match to protein family HMM TIGR01409 YP_002753164.1 identified by similarity to SP:P32715 YP_002753165.1 identified by similarity to SP:P32716; match to protein family HMM PF00529 YP_002753166.1 identified by similarity to GB:CAH22673.1 YP_002753167.1 identified by match to protein family HMM PF02321 YP_002753168.1 identified by similarity to GB:AAC38456.1; match to protein family HMM PF02018 YP_002753170.1 identified by match to protein family HMM PF07287 YP_002753171.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466 YP_002753172.1 identified by similarity to SP:P37967; match to protein family HMM PF00135 YP_002753173.1 identified by match to protein family HMM PF00933; match to protein family HMM PF01915 YP_002753174.1 identified by similarity to SP:P40713; match to protein family HMM PF00294 YP_002753175.1 identified by match to protein family HMM PF00392; match to protein family HMM PF00532 YP_002753176.1 identified by similarity to SP:P38370; match to protein family HMM PF00593 YP_002753177.1 identified by match to protein family HMM PF00251 YP_002753178.1 identified by similarity to SP:P09098; match to protein family HMM PF00083; match to protein family HMM PF07690; match to protein family HMM TIGR00879 YP_002753179.1 identified by match to protein family HMM PF02012 YP_002753180.1 identified by match to protein family HMM PF00657 YP_002753181.1 identified by match to protein family HMM PF01380 YP_002753182.1 identified by match to protein family HMM PF00728; match to protein family HMM PF02838 YP_002753183.1 identified by similarity to GB:AAK69033.1; match to protein family HMM PF00704 YP_002753184.1 identified by match to protein family HMM TIGR01409 YP_002753185.1 identified by match to protein family HMM PF02447; match to protein family HMM PF03600; match to protein family HMM TIGR00791 YP_002753186.1 identified by glimmer; putative YP_002753187.1 identified by similarity to SP:P94212; match to protein family HMM PF01979; match to protein family HMM PF07908; match to protein family HMM PF07969 YP_002753188.1 identified by similarity to GB:CAH34621.1 YP_002753189.1 identified by match to protein family HMM PF00728 YP_002753190.1 identified by similarity to GB:AAB70917.1; match to protein family HMM PF00704 YP_002753191.1 identified by similarity to GB:AAB70917.1; match to protein family HMM PF00041; match to protein family HMM PF00704; match to protein family HMM PF02839 YP_002753192.1 identified by match to protein family HMM PF00455; match to protein family HMM PF01978; match to protein family HMM PF08220 YP_002753193.1 identified by match to protein family HMM PF05738; match to protein family HMM PF07715 YP_002753194.1 identified by match to protein family HMM PF00515; match to protein family HMM PF07719 YP_002753195.1 identified by match to protein family HMM PF01943 YP_002753196.1 identified by match to protein family HMM PF00534 YP_002753197.1 identified by match to protein family HMM PF00535 YP_002753198.1 identified by similarity to SP:P0A235 YP_002753199.1 identified by match to protein family HMM PF01075 YP_002753200.1 identified by glimmer; putative YP_002753201.1 identified by similarity to GB:BAB83765.1; match to protein family HMM PF02065 YP_002753202.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide YP_002753203.1 identified by match to protein family HMM PF05016 YP_002753204.1 identified by match to protein family HMM TIGR02574 YP_002753205.1 identified by glimmer; putative YP_002753206.1 identified by glimmer; putative YP_002753207.1 identified by similarity to SP:P39158; match to protein family HMM PF00313 YP_002753208.1 identified by match to protein family HMM PF00675; match to protein family HMM PF05193 YP_002753209.1 identified by match to protein family HMM PF04055; match to protein family HMM TIGR00048 YP_002753210.1 identified by glimmer; putative YP_002753211.1 identified by match to protein family HMM PF02463 YP_002753212.1 identified by match to protein family HMM PF01933; match to protein family HMM TIGR01826 YP_002753213.1 identified by match to protein family HMM PF00515; match to protein family HMM PF07719 YP_002753215.1 identified by match to protein family HMM PF01850; match to protein family HMM TIGR00305 YP_002753216.1 identified by similarity to SP:P09148; match to protein family HMM PF01087; match to protein family HMM PF02744; match to protein family HMM TIGR00209 YP_002753217.1 identified by match to protein family HMM PF00356; match to protein family HMM PF00532 YP_002753218.1 identified by similarity to GB:AAD23585.1; match to protein family HMM PF02065 YP_002753219.1 identified by match to protein family HMM PF05738; match to protein family HMM PF07715 YP_002753220.1 identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721 YP_002753221.1 identified by glimmer; putative YP_002753222.1 identified by glimmer; putative YP_002753223.1 identified by match to protein family HMM PF01301 YP_002753224.1 identified by match to protein family HMM PF00703; match to protein family HMM PF02836; match to protein family HMM PF02837 YP_002753225.1 identified by similarity to GB:AAL71841.1; match to protein family HMM TIGR03371 YP_002753226.1 identified by similarity to SP:P21877; match to protein family HMM PF00535; match to protein family HMM PF03170; match to protein family HMM PF07238; match to protein family HMM TIGR03030 YP_002753227.1 catalyzes the hydrolysis of 1,4-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans YP_002753228.1 identified by glimmer; putative YP_002753229.1 identified by glimmer; putative YP_002753230.1 identified by match to protein family HMM PF00582; match to protein family HMM PF02702 YP_002753231.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF08448 YP_002753232.1 identified by match to protein family HMM PF00571; match to protein family HMM PF00654 YP_002753233.1 identified by glimmer; putative YP_002753234.1 identified by glimmer; putative YP_002753235.1 identified by match to protein family HMM TIGR00268 YP_002753236.1 identified by match to protein family HMM PF01969; match to protein family HMM TIGR00299 YP_002753237.1 identified by similarity to GB:AAD29318.1 YP_002753238.1 identified by glimmer; putative YP_002753239.1 identified by similarity to SP:P50214; match to protein family HMM PF00180; match to protein family HMM TIGR00183 YP_002753240.1 identified by similarity to SP:P49814; match to protein family HMM PF00056; match to protein family HMM PF02737; match to protein family HMM PF02866; match to protein family HMM TIGR01763 YP_002753241.1 identified by match to protein family HMM PF01850 YP_002753242.1 identified by match to protein family HMM PF04014; match to protein family HMM TIGR01439 YP_002753243.1 identified by glimmer; putative YP_002753244.1 identified by glimmer; putative YP_002753245.1 identified by match to protein family HMM PF00160 YP_002753246.1 identified by match to protein family HMM PF00160 YP_002753247.1 identified by glimmer; putative YP_002753248.1 identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229 YP_002753250.1 identified by match to protein family HMM TIGR01444 YP_002753251.1 identified by similarity to SP:P17596; match to protein family HMM PF00037; match to protein family HMM TIGR00384 YP_002753252.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol YP_002753253.1 identified by similarity to GB:AAO42599.1; match to protein family HMM TIGR02046 YP_002753254.1 identified by match to protein family HMM PF01725; match to protein family HMM TIGR00042 YP_002753255.1 identified by match to protein family HMM PF00633; match to protein family HMM PF00730 YP_002753256.1 identified by match to protein family HMM PF00665 YP_002753257.1 identified by similarity to SP:P28612; match to protein family HMM PF00691 YP_002753258.1 identified by similarity to SP:P28611; match to protein family HMM PF01618 YP_002753259.1 identified by match to protein family HMM PF06289 YP_002753260.1 identified by similarity to SP:Q05203; match to protein family HMM PF00669; match to protein family HMM PF00700 YP_002753261.1 identified by match to protein family HMM PF02465; match to protein family HMM PF07195; match to protein family HMM PF07196 YP_002753262.1 identified by match to protein family HMM TIGR00208 YP_002753263.1 identified by match to protein family HMM PF00005; match to protein family HMM PF00664 YP_002753264.1 identified by match to protein family HMM PF03739 YP_002753265.1 identified by glimmer; putative YP_002753267.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00990; match to protein family HMM TIGR00254 YP_002753268.1 identified by match to protein family HMM PF02581; match to protein family HMM TIGR00693 YP_002753269.1 identified by match to protein family HMM PF00324 YP_002753270.1 identified by match to protein family HMM PF00324 YP_002753272.1 identified by similarity to GB:AAU16403.1 YP_002753273.1 identified by similarity to SP:O08333; match to protein family HMM PF00365; match to protein family HMM TIGR02483 YP_002753274.1 identified by match to protein family HMM PF00376; match to protein family HMM TIGR01764 YP_002753275.1 identified by similarity to SP:P71240 YP_002753276.1 identified by match to protein family HMM PF00557; match to protein family HMM PF01321 YP_002753277.1 identified by similarity to SP:P49786; match to protein family HMM PF00364; match to protein family HMM TIGR00531 YP_002753278.1 identified by similarity to SP:P49787; match to protein family HMM PF00289; match to protein family HMM PF02222; match to protein family HMM PF02785; match to protein family HMM PF02786; match to protein family HMM PF08443; match to protein family HMM TIGR00514 YP_002753279.1 identified by match to protein family HMM PF05163 YP_002753280.1 identified by match to protein family HMM PF00015 YP_002753281.1 identified by match to protein family HMM PF01850 YP_002753282.1 identified by match to protein family HMM PF04014 YP_002753283.1 identified by match to protein family HMM PF02642 YP_002753284.1 identified by match to protein family HMM PF02632 YP_002753285.1 identified by glimmer; putative YP_002753286.1 identified by match to protein family HMM PF03091 YP_002753287.1 identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880 YP_002753288.1 identified by match to protein family HMM PF04977 YP_002753289.1 identified by glimmer; putative YP_002753290.1 identified by similarity to SP:P10478; match to protein family HMM PF00331 YP_002753291.1 identified by glimmer; putative YP_002753292.1 identified by match to protein family HMM PF01738 YP_002753293.1 identified by match to protein family HMM PF05977; match to protein family HMM PF07690 YP_002753294.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence YP_002753295.1 identified by similarity to SP:P50849; match to protein family HMM PF00013; match to protein family HMM PF00575; match to protein family HMM PF01138; match to protein family HMM PF03725 YP_002753297.1 identified by glimmer; putative YP_002753299.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active YP_002753300.1 identified by glimmer; putative YP_002753301.1 catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway YP_002753302.1 identified by match to protein family HMM PF00144 YP_002753303.1 identified by similarity to SP:P72365; match to protein family HMM PF00717; match to protein family HMM TIGR02227 YP_002753304.1 identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254 YP_002753305.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis YP_002753306.1 identified by match to protein family HMM PF01590; match to protein family HMM PF07228 YP_002753307.1 identified by match to protein family HMM PF00156; match to protein family HMM TIGR01203 YP_002753308.1 identified by match to protein family HMM PF01790; match to protein family HMM TIGR00544 YP_002753309.1 identified by match to protein family HMM PF01863 YP_002753310.1 identified by match to protein family HMM PF00563 YP_002753311.1 identified by match to protein family HMM PF00515; match to protein family HMM PF07719 YP_002753312.1 identified by match to protein family HMM PF00005; match to protein family HMM TIGR00630 YP_002753313.1 identified by match to protein family HMM PF00856 YP_002753314.1 identified by glimmer; putative YP_002753315.1 identified by match to protein family HMM PF00067 YP_002753316.1 identified by similarity to SP:P22610; match to protein family HMM PF01478; match to protein family HMM PF06750 YP_002753317.1 identified by match to protein family HMM PF03819; match to protein family HMM TIGR00444 YP_002753318.1 identified by match to protein family HMM PF01188; match to protein family HMM PF02746; match to protein family HMM TIGR01928 YP_002753319.1 identified by match to protein family HMM PF00266 YP_002753320.1 identified by glimmer; putative YP_002753321.1 identified by similarity to SP:Q92947; match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028 YP_002753322.1 identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254 YP_002753323.1 identified by match to protein family HMM PF00005 YP_002753324.1 identified by match to protein family HMM PF02405; match to protein family HMM TIGR00056 YP_002753325.1 identified by similarity to SP:Q06065; match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM PF07728 YP_002753326.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM PF08448; match to protein family HMM TIGR00229 YP_002753327.1 identified by match to protein family HMM PF03275; match to protein family HMM TIGR00031 YP_002753328.1 identified by match to protein family HMM PF00535 YP_002753329.1 identified by similarity to PDB:1MRU_A; match to protein family HMM PF00069; match to protein family HMM PF00515; match to protein family HMM PF07719 YP_002753330.1 identified by glimmer; putative YP_002753331.1 identified by match to protein family HMM PF00271; match to protein family HMM PF04408; match to protein family HMM PF08482; match to protein family HMM TIGR01970 YP_002753332.1 identified by match to protein family HMM PF03551 YP_002753333.1 identified by glimmer; putative YP_002753334.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229 YP_002753335.1 identified by glimmer; putative YP_002753336.1 identified by match to protein family HMM PF00165 YP_002753337.1 identified by match to protein family HMM PF01073; match to protein family HMM PF01370 YP_002753338.1 identified by match to protein family HMM PF07883 YP_002753339.1 identified by match to protein family HMM PF01408; match to protein family HMM PF02894 YP_002753340.1 identified by similarity to SP:Q01578; match to protein family HMM PF08450 YP_002753341.1 identified by match to protein family HMM PF07690 YP_002753342.1 identified by match to protein family HMM PF00920 YP_002753343.1 identified by similarity to GB:BAD63650.1 YP_002753344.1 identified by match to protein family HMM PF00440 YP_002753345.1 identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993 YP_002753346.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370 YP_002753347.1 identified by match to protein family HMM PF00107; match to protein family HMM PF08240 YP_002753348.1 identified by match to protein family HMM PF07883 YP_002753349.1 identified by glimmer; putative YP_002753350.1 identified by similarity to GB:AAF86624.1; match to protein family HMM PF00106; match to protein family HMM PF08659 YP_002753351.1 identified by match to protein family HMM PF02566 YP_002753352.1 identified by glimmer; putative YP_002753353.1 identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254 YP_002753354.1 identified by match to protein family HMM PF00578; match to protein family HMM PF08534 YP_002753355.1 identified by glimmer; putative YP_002753356.1 identified by glimmer; putative YP_002753357.1 identified by match to protein family HMM PF00141; match to protein family HMM TIGR00198 YP_002753358.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466 YP_002753359.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function YP_002753360.1 identified by match to protein family HMM TIGR03421 YP_002753361.1 identified by glimmer; putative YP_002753362.1 identified by glimmer; putative YP_002753363.1 identified by glimmer; putative YP_002753364.1 identified by match to protein family HMM PF04024 YP_002753365.1 identified by match to protein family HMM PF00561 YP_002753366.1 identified by match to protein family HMM PF00278; match to protein family HMM PF02784; match to protein family HMM TIGR01048 YP_002753367.1 identified by similarity to SP:P37967; match to protein family HMM PF00135 YP_002753368.1 identified by match to protein family HMM PF00005 YP_002753369.1 identified by similarity to SP:P37731; match to protein family HMM PF00528; match to protein family HMM TIGR02141 YP_002753370.1 identified by similarity to SP:P37734; match to protein family HMM PF01547; match to protein family HMM TIGR01256 YP_002753371.1 identified by match to protein family HMM PF00376; match to protein family HMM PF03459; match to protein family HMM TIGR00638; match to protein family HMM TIGR01764 YP_002753372.1 identified by match to protein family HMM PF00291; match to protein family HMM TIGR00260 YP_002753373.1 identified by match to protein family HMM PF00288; match to protein family HMM TIGR00191 YP_002753374.1 identified by similarity to SP:P06544; match to protein family HMM PF00085; match to protein family HMM TIGR01068 YP_002753375.1 Represses a number of genes involved in the response to DNA damage YP_002753376.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00486 YP_002753377.1 identified by match to protein family HMM PF00158; match to protein family HMM PF07728 YP_002753379.1 identified by match to protein family HMM PF00460; match to protein family HMM PF06429; match to protein family HMM TIGR01395 YP_002753380.1 identified by match to protein family HMM PF02049; match to protein family HMM TIGR00205 YP_002753381.1 identified by similarity to SP:P25798; match to protein family HMM PF01514; match to protein family HMM PF08345; match to protein family HMM TIGR00206 YP_002753382.1 identified by match to protein family HMM PF01706; match to protein family HMM TIGR00207 YP_002753383.1 identified by glimmer; putative YP_002753384.1 identified by match to protein family HMM PF00006; match to protein family HMM PF02874; match to protein family HMM TIGR01026; match to protein family HMM TIGR02545; match to protein family HMM TIGR03496 YP_002753385.1 identified by glimmer; putative YP_002753386.1 identified by glimmer; putative YP_002753387.1 identified by similarity to SP:P75936 YP_002753388.1 identified by similarity to SP:P75937; match to protein family HMM PF00460; match to protein family HMM PF06429; match to protein family HMM PF07559 YP_002753389.1 identified by match to protein family HMM TIGR02480 YP_002753390.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus YP_002753391.1 identified by similarity to SP:P35535; match to protein family HMM PF01313 YP_002753392.1 identified by match to protein family HMM PF01311; match to protein family HMM TIGR01400 YP_002753393.1 identified by similarity to SP:P40727; match to protein family HMM PF01312 YP_002753394.1 identified by similarity to SP:P35620; match to protein family HMM PF00771; match to protein family HMM TIGR01398 YP_002753395.1 identified by match to protein family HMM PF04539; match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02479; match to protein family HMM TIGR02937 YP_002753396.1 identified by match to protein family HMM PF01052 YP_002753397.1 identified by match to protein family HMM PF05157 YP_002753398.1 identified by similarity to SP:P23446; match to protein family HMM PF00460 YP_002753399.1 identified by similarity to SP:P16439; match to protein family HMM PF00460; match to protein family HMM PF06429 YP_002753400.1 identified by match to protein family HMM PF02107 YP_002753401.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum YP_002753403.1 identified by similarity to SP:P43532; match to protein family HMM PF04316 YP_002753404.1 identified by glimmer; putative YP_002753405.1 identified by similarity to SP:P33235; match to protein family HMM PF00460; match to protein family HMM PF06429; match to protein family HMM TIGR02492 YP_002753406.1 identified by match to protein family HMM PF00669 YP_002753407.1 identified by similarity to SP:Q44472; match to protein family HMM PF05161 YP_002753408.1 identified by similarity to GB:AAW61119.1 YP_002753409.1 identified by similarity to GB:AAC82366.1; match to protein family HMM PF01546; match to protein family HMM PF07687 YP_002753410.1 identified by glimmer; putative YP_002753411.1 identified by similarity to SP:P37512; match to protein family HMM PF03190 YP_002753413.1 identified by glimmer; putative YP_002753414.1 identified by glimmer; putative YP_002753415.1 identified by match to protein family HMM PF00089; match to protein family HMM PF00595; match to protein family HMM TIGR02037 YP_002753416.1 identified by match to protein family HMM PF00892 YP_002753418.1 identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797 YP_002753419.1 identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738 YP_002753420.1 identified by match to protein family HMM PF00149; match to protein family HMM TIGR00282 YP_002753421.1 identified by match to protein family HMM PF00152; match to protein family HMM PF01336; match to protein family HMM TIGR00499 YP_002753422.1 identified by glimmer; putative YP_002753423.1 identified by similarity to GB:AAS95400.1 YP_002753424.1 identified by glimmer; putative YP_002753425.1 identified by match to protein family HMM PF00119; match to protein family HMM TIGR01131 YP_002753426.1 identified by match to protein family HMM PF00137 YP_002753427.1 identified by match to protein family HMM PF00361; match to protein family HMM TIGR01770 YP_002753428.1 identified by match to protein family HMM PF00361; match to protein family HMM TIGR01972 YP_002753429.1 identified by match to protein family HMM PF00361; match to protein family HMM PF00662; match to protein family HMM TIGR01974 YP_002753430.1 identified by match to protein family HMM PF00420 YP_002753431.1 identified by match to protein family HMM PF00499 YP_002753432.1 identified by match to protein family HMM PF00146 YP_002753433.1 identified by match to protein family HMM PF00037; match to protein family HMM PF00111; match to protein family HMM PF00384; match to protein family HMM PF04879 YP_002753434.1 identified by match to protein family HMM PF01512; match to protein family HMM TIGR01959 YP_002753435.1 identified by match to protein family HMM PF01257; match to protein family HMM TIGR01958 YP_002753436.1 identified by glimmer; putative YP_002753437.1 identified by match to protein family HMM PF00346; match to protein family HMM TIGR01962 YP_002753438.1 identified by match to protein family HMM PF00329; match to protein family HMM TIGR01961 YP_002753439.1 identified by match to protein family HMM PF00507 YP_002753440.1 identified by match to protein family HMM PF00903 YP_002753441.1 identified by match to protein family HMM PF00165 YP_002753442.1 identified by glimmer; putative YP_002753443.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis YP_002753445.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate YP_002753446.1 identified by glimmer; putative YP_002753447.1 identified by glimmer; putative YP_002753448.1 identified by similarity to GB:CAD14897.1; match to protein family HMM PF04966 YP_002753449.1 identified by glimmer; putative YP_002753450.1 identified by match to protein family HMM PF02583 YP_002753451.1 identified by match to protein family HMM PF00005; match to protein family HMM PF00664 YP_002753453.1 identified by match to protein family HMM PF01202; match to protein family HMM TIGR01313 YP_002753454.1 identified by match to protein family HMM PF01008; match to protein family HMM TIGR00512; match to protein family HMM TIGR00524 YP_002753455.1 identified by similarity to GB:AAR35012.1; match to protein family HMM PF03692 YP_002753456.1 An oxygenase that acts to open the ring of homogentisate formingmaleylacetoacetate as part of the catabolism of L-tyrosine and L-phenylalanine YP_002753457.1 identified by glimmer; putative YP_002753458.1 identified by match to protein family HMM PF01557; match to protein family HMM PF09298; match to protein family HMM TIGR01266 YP_002753459.1 identified by match to protein family HMM PF00532 YP_002753460.1 identified by match to protein family HMM PF00742; match to protein family HMM PF01842; match to protein family HMM PF03447 YP_002753461.1 identified by glimmer; putative YP_002753462.1 identified by match to protein family HMM PF00248 YP_002753463.1 identified by match to protein family HMM PF00037; match to protein family HMM PF00111; match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; match to protein family HMM TIGR01591 YP_002753465.1 identified by match to protein family HMM PF00532 YP_002753466.1 identified by similarity to SP:O86028; match to protein family HMM PF01642; match to protein family HMM TIGR00641 YP_002753467.1 identified by glimmer; putative YP_002753469.1 identified by glimmer; putative YP_002753470.1 identified by match to protein family HMM PF00701 YP_002753471.1 identified by match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR03710 YP_002753472.1 catalyzes the coenzyme A-dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin YP_002753473.1 identified by similarity to GB:BAD48479.1; match to protein family HMM PF03629 YP_002753474.1 identified by glimmer; putative YP_002753475.1 identified by similarity to SP:P54736; match to protein family HMM PF00069; match to protein family HMM PF00515; match to protein family HMM PF07719 YP_002753476.1 identified by similarity to GB:AAK73301.1 YP_002753477.1 identified by match to protein family HMM PF02597; match to protein family HMM TIGR01683 YP_002753478.1 identified by match to protein family HMM PF00528 YP_002753479.1 identified by match to protein family HMM PF00188 YP_002753480.1 identified by match to protein family HMM PF04244 YP_002753481.1 identified by match to protein family HMM PF01266; match to protein family HMM PF01593 YP_002753482.1 identified by similarity to GB:BAC11899.1 YP_002753483.1 identified by match to protein family HMM PF00665 YP_002753484.1 identified by glimmer; putative YP_002753485.1 identified by glimmer; putative YP_002753486.1 identified by match to protein family HMM PF01565; match to protein family HMM PF02873; match to protein family HMM TIGR00179 YP_002753487.1 identified by match to protein family HMM PF03808 YP_002753488.1 identified by glimmer; putative YP_002753489.1 identified by match to protein family HMM PF00005 YP_002753490.1 identified by match to protein family HMM PF00005 YP_002753491.1 identified by glimmer; putative YP_002753492.1 identified by match to protein family HMM PF01926; match to protein family HMM PF02421; match to protein family HMM PF07664; match to protein family HMM PF07670; match to protein family HMM TIGR00231; match to protein family HMM TIGR00437 YP_002753493.1 identified by match to protein family HMM PF04023 YP_002753495.1 identified by glimmer; putative YP_002753496.1 identified by similarity to GB:AAS03903.1; match to protein family HMM PF08837 YP_002753497.1 identified by glimmer; putative YP_002753498.1 E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC YP_002753501.1 identified by glimmer; putative YP_002753502.1 identified by glimmer; putative YP_002753503.1 identified by glimmer; putative YP_002753504.1 identified by match to protein family HMM PF01960; match to protein family HMM TIGR00120 YP_002753505.1 identified by match to protein family HMM PF00005 YP_002753506.1 identified by glimmer; putative YP_002753507.1 identified by glimmer; putative YP_002753508.1 identified by glimmer; putative YP_002753509.1 identified by glimmer; putative YP_002753510.1 identified by glimmer; putative YP_002753511.1 identified by glimmer; putative YP_002753512.1 identified by glimmer; putative YP_002753513.1 identified by glimmer; putative YP_002753514.1 identified by glimmer; putative YP_002753515.1 identified by glimmer; putative YP_002753516.1 identified by glimmer; putative YP_002753517.1 identified by glimmer; putative YP_002753518.1 identified by glimmer; putative YP_002753519.1 identified by glimmer; putative YP_002753520.1 identified by glimmer; putative YP_002753521.1 identified by glimmer; putative YP_002753522.1 identified by glimmer; putative YP_002753523.1 identified by glimmer; putative YP_002753524.1 identified by glimmer; putative YP_002753525.1 identified by glimmer; putative YP_002753526.1 identified by glimmer; putative YP_002753527.1 identified by match to protein family HMM PF00665 YP_002753528.1 identified by glimmer; putative YP_002753529.1 identified by glimmer; putative YP_002753530.1 identified by match to protein family HMM PF01381 YP_002753531.1 identified by glimmer; putative YP_002753532.1 identified by match to protein family HMM PF01832 YP_002753533.1 identified by glimmer; putative YP_002753534.1 identified by glimmer; putative YP_002753536.1 identified by glimmer; putative YP_002753537.1 identified by glimmer; putative YP_002753538.1 identified by match to protein family HMM PF03237 YP_002753540.1 identified by match to protein family HMM PF04233; match to protein family HMM TIGR01641 YP_002753542.1 identified by glimmer; putative YP_002753544.1 identified by glimmer; putative YP_002753547.1 identified by glimmer; putative YP_002753548.1 identified by glimmer; putative YP_002753549.1 identified by glimmer; putative YP_002753550.1 identified by glimmer; putative YP_002753551.1 identified by glimmer; putative YP_002753552.1 identified by glimmer; putative YP_002753553.1 identified by glimmer; putative YP_002753554.1 identified by glimmer; putative YP_002753555.1 identified by glimmer; putative YP_002753556.1 identified by glimmer; putative YP_002753557.1 identified by match to protein family HMM PF00925; match to protein family HMM PF00926; match to protein family HMM TIGR00506 YP_002753558.1 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509 YP_002753559.1 identified by match to protein family HMM PF00155 YP_002753560.1 identified by match to protein family HMM PF00753 YP_002753561.1 identified by match to protein family HMM PF07690 YP_002753562.1 identified by match to protein family HMM PF00532 YP_002753563.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00486 YP_002753564.1 identified by glimmer; putative YP_002753565.1 identified by glimmer; putative YP_002753566.1 catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions YP_002753567.1 identified by similarity to GB:AAB96336.1; match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01497 YP_002753568.1 identified by similarity to SP:P03961; match to protein family HMM PF02669; match to protein family HMM TIGR00681 YP_002753569.1 identified by match to protein family HMM PF07690 YP_002753570.1 identified by similarity to GB:AAD44542.1; match to protein family HMM PF00037 YP_002753571.1 identified by match to protein family HMM PF02627; match to protein family HMM TIGR00778; match to protein family HMM TIGR01926 YP_002753572.1 identified by similarity to GB:AAM41488.1 YP_002753573.1 identified by glimmer; putative YP_002753574.1 identified by glimmer; putative YP_002753575.1 identified by match to protein family HMM PF02627; match to protein family HMM TIGR01926 YP_002753576.1 identified by match to protein family HMM PF02627; match to protein family HMM TIGR00778; match to protein family HMM TIGR01926 YP_002753577.1 identified by glimmer; putative YP_002753578.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF08659 YP_002753579.1 identified by match to protein family HMM PF00881 YP_002753580.1 identified by match to protein family HMM PF00107; match to protein family HMM PF08240 YP_002753581.1 identified by match to protein family HMM PF00561 YP_002753582.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF08659 YP_002753583.1 identified by match to protein family HMM PF03060 YP_002753584.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229 YP_002753585.1 identified by match to protein family HMM PF00072 YP_002753586.1 identified by similarity to SP:P23221; match to protein family HMM PF00072; match to protein family HMM PF00196; match to protein family HMM PF08281 YP_002753587.1 identified by match to protein family HMM PF00665 YP_002753588.1 identified by match to protein family HMM PF01527 YP_002753589.1 identified by match to protein family HMM PF00702 YP_002753590.1 identified by similarity to SP:P33582; match to protein family HMM PF03840; match to protein family HMM TIGR00810 YP_002753591.1 identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254 YP_002753593.1 with PdxST is involved in the biosynthesis of pyridoxal 5'-phosphate; PdxT catalyzes the hydrolysis of glutamine to glutamate and ammonia; PdxS utilizes the ammonia to synthesize pyridoxal 5'-phosphate YP_002753594.1 with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate YP_002753595.1 identified by match to protein family HMM PF00654; match to protein family HMM PF02080 YP_002753596.1 identified by match to protein family HMM PF03061 YP_002753597.1 identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254 YP_002753598.1 identified by match to protein family HMM PF00919; match to protein family HMM PF01938; match to protein family HMM PF04055; match to protein family HMM TIGR00089; match to protein family HMM TIGR01574 YP_002753599.1 identified by similarity to PIR:A70326; match to protein family HMM PF02577 YP_002753600.1 identified by similarity to PIR:E85829 YP_002753601.1 identified by match to protein family HMM PF00534 YP_002753602.1 identified by match to protein family HMM PF02322; match to protein family HMM TIGR00203 YP_002753603.1 identified by match to protein family HMM PF01654 YP_002753605.1 identified by match to protein family HMM PF00582 YP_002753606.1 identified by match to protein family HMM PF00582 YP_002753607.1 identified by glimmer; putative YP_002753608.1 identified by glimmer; putative YP_002753609.1 identified by match to protein family HMM PF00027; match to protein family HMM PF00325 YP_002753610.1 identified by match to protein family HMM PF00158; match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF02954; match to protein family HMM PF07728; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229 YP_002753612.1 identified by similarity to SP:P46445; match to protein family HMM PF00034 YP_002753613.1 identified by glimmer; putative YP_002753614.1 identified by match to protein family HMM TIGR01905; match to protein family HMM TIGR03508 YP_002753615.1 identified by glimmer; putative YP_002753616.1 identified by similarity to GB:AAA75486.1; match to protein family HMM PF01515 YP_002753617.1 identified by match to protein family HMM PF00675; match to protein family HMM PF05193 YP_002753618.1 identified by glimmer; putative YP_002753619.1 identified by match to protein family HMM PF00578; match to protein family HMM PF08534 YP_002753620.1 identified by match to protein family HMM PF02353; match to protein family HMM PF08241; match to protein family HMM PF08242 YP_002753621.1 identified by match to protein family HMM PF02012 YP_002753622.1 identified by similarity to GB:AAF04082.1; match to protein family HMM TIGR01352 YP_002753623.1 identified by match to protein family HMM PF00133; match to protein family HMM PF06827; match to protein family HMM PF08264; match to protein family HMM PF09334; match to protein family HMM TIGR00392 YP_002753624.1 identified by match to protein family HMM PF01252; match to protein family HMM TIGR00077 YP_002753625.1 identified by match to protein family HMM PF00004; match to protein family HMM TIGR02397 YP_002753626.1 identified by match to protein family HMM PF02575; match to protein family HMM TIGR00103 YP_002753627.1 identified by match to protein family HMM PF00072 YP_002753628.1 identified by match to protein family HMM PF00005 YP_002753629.1 identified by match to protein family HMM PF00528 YP_002753630.1 identified by match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM PF05227 YP_002753631.1 identified by match to protein family HMM PF00072 YP_002753632.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229 YP_002753633.1 identified by match to protein family HMM PF01408; match to protein family HMM PF02894 YP_002753635.1 identified by match to protein family HMM PF00691 YP_002753636.1 identified by similarity to SP:P19935; match to protein family HMM PF07676; match to protein family HMM TIGR02800 YP_002753637.1 identified by match to protein family HMM TIGR01352 YP_002753638.1 identified by match to protein family HMM PF02472 YP_002753639.1 identified by match to protein family HMM PF01618 YP_002753640.1 identified by match to protein family HMM PF02463; match to protein family HMM TIGR00634 YP_002753641.1 identified by match to protein family HMM PF08002 YP_002753642.1 identified by glimmer; putative YP_002753643.1 identified by glimmer; putative YP_002753644.1 identified by glimmer; putative YP_002753645.1 involved in a recombinational process of DNA repair, independent of the recBC complex YP_002753647.1 identified by match to protein family HMM PF01743 YP_002753648.1 identified by glimmer; putative YP_002753649.1 identified by match to protein family HMM PF00132; match to protein family HMM PF04613; match to protein family HMM TIGR01853 YP_002753650.1 identified by match to protein family HMM PF00072 YP_002753651.1 identified by match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF05231; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254 YP_002753652.1 identified by glimmer; putative YP_002753653.1 identified by match to protein family HMM PF07837; match to protein family HMM TIGR02024 YP_002753654.1 identified by glimmer; putative YP_002753655.1 identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033 YP_002753656.1 identified by glimmer; putative YP_002753657.1 identified by match to protein family HMM PF00248 YP_002753658.1 identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730 YP_002753660.1 catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose YP_002753661.1 identified by match to protein family HMM PF00398; match to protein family HMM TIGR00755 YP_002753662.1 identified by glimmer; putative YP_002753663.1 identified by similarity to GB:CAD17103.1 YP_002753664.1 identified by match to protein family HMM PF02075; match to protein family HMM TIGR00228 YP_002753665.1 identified by match to protein family HMM PF00034 YP_002753666.1 identified by match to protein family HMM TIGR01409 YP_002753667.1 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate YP_002753668.1 identified by glimmer; putative YP_002753670.1 identified by glimmer; putative YP_002753671.1 identified by match to protein family HMM PF00588 YP_002753672.1 identified by glimmer; putative YP_002753673.1 identified by glimmer; putative YP_002753674.1 identified by match to protein family HMM PF01425 YP_002753675.1 identified by similarity to GB:AAD10036.1; match to protein family HMM PF00313 YP_002753676.1 identified by similarity to GB:AAK25319.1 YP_002753677.1 identified by match to protein family HMM PF00450 YP_002753678.1 identified by match to protein family HMM PF07971; match to protein family HMM TIGR01180 YP_002753679.1 identified by glimmer; putative YP_002753680.1 identified by match to protein family HMM PF00657 YP_002753681.1 identified by match to protein family HMM PF07470 YP_002753682.1 identified by match to protein family HMM PF01301; match to protein family HMM PF02449 YP_002753684.1 identified by match to protein family HMM PF00295 YP_002753685.1 transports L-rhamnose and L-lyxose into the cell YP_002753686.1 identified by similarity to GB:BAD14073.1 YP_002753687.1 identified by match to protein family HMM PF00532; match to protein family HMM PF09339 YP_002753688.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF08659; match to protein family HMM TIGR02632 YP_002753689.1 identified by similarity to SP:P32171; match to protein family HMM PF00370 YP_002753690.1 identified by similarity to SP:Q00017; match to protein family HMM PF00657 YP_002753691.1 identified by glimmer; putative YP_002753692.1 identified by glimmer; putative YP_002753693.1 identified by glimmer; putative YP_002753694.1 identified by glimmer; putative YP_002753696.1 identified by glimmer; putative YP_002753697.1 identified by glimmer; putative YP_002753698.1 identified by match to protein family HMM PF01435 YP_002753699.1 identified by glimmer; putative YP_002753700.1 identified by match to protein family HMM PF00593; match to protein family HMM PF07715 YP_002753701.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate YP_002753702.1 identified by glimmer; putative YP_002753703.1 identified by match to protein family HMM PF00657 YP_002753704.1 identified by match to protein family HMM PF00704 YP_002753705.1 identified by glimmer; putative YP_002753706.1 identified by similarity to GB:AAL99356.1; match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776 YP_002753707.1 identified by similarity to GB:AAS55712.1; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993 YP_002753708.1 identified by similarity to GB:AAA88700.1; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF07993; match to protein family HMM TIGR02622 YP_002753709.1 identified by match to protein family HMM PF00483; match to protein family HMM TIGR02623 YP_002753710.1 identified by similarity to SP:O22007; match to protein family HMM PF00535 YP_002753711.1 identified by match to protein family HMM PF01041 YP_002753713.1 identified by similarity to GB:AAK24561.1 YP_002753714.1 identified by similarity to GB:AAO57780.1 YP_002753715.1 identified by match to protein family HMM PF00903 YP_002753716.1 identified by match to protein family HMM PF00107; match to protein family HMM PF08240; match to protein family HMM TIGR02822 YP_002753717.1 identified by match to protein family HMM PF01596 YP_002753718.1 identified by similarity to GB:BAD75019.1; match to protein family HMM PF07609 YP_002753719.1 identified by match to protein family HMM PF02092; match to protein family HMM PF05746; match to protein family HMM TIGR00211 YP_002753720.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA YP_002753721.1 identified by match to protein family HMM PF02565; match to protein family HMM TIGR00613 YP_002753722.1 identified by glimmer; putative YP_002753723.1 identified by match to protein family HMM PF00120; match to protein family HMM PF03951 YP_002753725.1 identified by match to protein family HMM PF01850 YP_002753727.1 identified by glimmer; putative YP_002753728.1 identified by similarity to GB:AAV82079.1 YP_002753729.1 identified by match to protein family HMM PF00899; match to protein family HMM PF05237 YP_002753730.1 identified by match to protein family HMM PF01103; match to protein family HMM PF07244 YP_002753731.1 identified by glimmer; putative YP_002753732.1 identified by similarity to GB:CAE80296.1; match to protein family HMM PF04357 YP_002753733.1 identified by match to protein family HMM PF04972 YP_002753734.1 identified by match to protein family HMM PF01040; match to protein family HMM TIGR01475 YP_002753735.1 identified by glimmer; putative YP_002753736.1 identified by match to protein family HMM PF00800; match to protein family HMM PF01842 YP_002753737.1 identified by match to protein family HMM PF00004; match to protein family HMM PF02190; match to protein family HMM PF05362; match to protein family HMM PF07728; match to protein family HMM TIGR00763 YP_002753738.1 identified by glimmer; putative YP_002753739.1 identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851; match to protein family HMM TIGR00595 YP_002753740.1 identified by match to protein family HMM PF03167; match to protein family HMM TIGR00758 YP_002753741.1 identified by match to protein family HMM PF02441; match to protein family HMM PF04127; match to protein family HMM TIGR00521 YP_002753742.1 identified by glimmer; putative YP_002753743.1 identified by match to protein family HMM PF01192; match to protein family HMM TIGR00690 YP_002753744.1 identified by match to protein family HMM PF00625 YP_002753745.1 identified by match to protein family HMM PF03755; match to protein family HMM PF08340; match to protein family HMM TIGR00255 YP_002753746.1 identified by match to protein family HMM PF00005; match to protein family HMM PF00664 YP_002753747.1 identified by match to protein family HMM PF03668 YP_002753748.1 identified by match to protein family HMM TIGR00741 YP_002753749.1 identified by match to protein family HMM PF00309; match to protein family HMM PF04552; match to protein family HMM PF04963; match to protein family HMM TIGR02395 YP_002753750.1 identified by match to protein family HMM PF00005 YP_002753751.1 identified by glimmer; putative YP_002753752.1 identified by glimmer; putative YP_002753753.1 identified by similarity to SP:O32243; similarity to SP:Q45462; match to protein family HMM PF04069 YP_002753754.1 identified by similarity to SP:O34878; similarity to SP:Q45461; match to protein family HMM PF00528 YP_002753755.1 identified by similarity to SP:Q45460; match to protein family HMM PF00005 YP_002753756.1 identified by similarity to SP:P06855 YP_002753757.1 identified by match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01534 YP_002753758.1 identified by match to protein family HMM PF00162 YP_002753760.1 identified by similarity to GB:AAM72057.1; match to protein family HMM PF04365 YP_002753761.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate YP_002753762.1 identified by match to protein family HMM PF00149; match to protein family HMM TIGR00040 YP_002753763.1 identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471 YP_002753765.1 identified by glimmer; putative YP_002753766.1 identified by match to protein family HMM PF02469 YP_002753767.1 identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937 YP_002753768.1 identified by similarity to GB:CAB62762.1 YP_002753769.1 identified by match to protein family HMM PF07605 YP_002753770.1 identified by similarity to SP:P15043; match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF00570; match to protein family HMM TIGR00614 YP_002753771.1 identified by match to protein family HMM PF00589 YP_002753772.1 identified by similarity to GB:AAD06650.1 YP_002753773.1 identified by match to protein family HMM PF08401 YP_002753775.1 identified by match to protein family HMM PF00004 YP_002753776.1 identified by glimmer; putative YP_002753779.1 identified by glimmer; putative YP_002753780.1 identified by glimmer; putative YP_002753781.1 identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254 YP_002753782.1 identified by similarity to GB:AAO57780.1 YP_002753783.1 identified by similarity to GB:AAS46706.1 YP_002753785.1 identified by glimmer; putative YP_002753786.1 identified by match to protein family HMM PF01381 YP_002753787.1 identified by glimmer; putative YP_002753788.1 identified by match to protein family HMM PF01965 YP_002753789.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF08659 YP_002753790.1 identified by match to protein family HMM PF00165; match to protein family HMM PF01965 YP_002753791.1 identified by match to protein family HMM PF01323 YP_002753792.1 identified by match to protein family HMM PF00795; match to protein family HMM PF02540; match to protein family HMM TIGR00552 YP_002753793.1 identified by glimmer; putative YP_002753794.1 identified by match to protein family HMM PF05275 YP_002753795.1 identified by similarity to SP:P12374; match to protein family HMM PF00394; match to protein family HMM PF07731; match to protein family HMM PF07732; match to protein family HMM TIGR01409; match to protein family HMM TIGR01480 YP_002753796.1 identified by glimmer; putative YP_002753797.1 identified by match to protein family HMM PF00581 YP_002753798.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM PF07728 YP_002753799.1 identified by match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM TIGR00229 YP_002753801.1 identified by match to protein family HMM PF01513 YP_002753802.1 identified by match to protein family HMM PF01479; match to protein family HMM PF01728; match to protein family HMM TIGR00478 YP_002753803.1 identified by match to protein family HMM PF00480 YP_002753804.1 identified by match to protein family HMM PF04140 YP_002753805.1 identified by match to protein family HMM PF00289; match to protein family HMM PF01071; match to protein family HMM PF02142; match to protein family HMM PF02786; match to protein family HMM PF02787; match to protein family HMM PF08443; match to protein family HMM TIGR01369 YP_002753806.1 identified by match to protein family HMM PF00117; match to protein family HMM PF00988; match to protein family HMM TIGR01368 YP_002753807.1 identified by match to protein family HMM PF02321 YP_002753808.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability YP_002753809.1 identified by match to protein family HMM PF01546; match to protein family HMM PF04389; match to protein family HMM PF07687 YP_002753810.1 identified by glimmer; putative YP_002753811.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993 YP_002753812.1 identified by match to protein family HMM PF00037 YP_002753813.1 identified by match to protein family HMM PF00535 YP_002753814.1 identified by match to protein family HMM PF02463 YP_002753815.1 identified by match to protein family HMM PF01259; match to protein family HMM TIGR00081 YP_002753816.1 identified by match to protein family HMM PF02674 YP_002753817.1 identified by match to protein family HMM PF02954 YP_002753818.1 identified by match to protein family HMM PF00702 YP_002753819.1 identified by match to protein family HMM PF00263; match to protein family HMM PF07719 YP_002753820.1 identified by similarity to GB:AAO79199.1; match to protein family HMM PF04041 YP_002753821.1 identified by match to protein family HMM PF00563; match to protein family HMM PF02518; match to protein family HMM PF07730 YP_002753822.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00196 YP_002753823.1 identified by match to protein family HMM PF01658; match to protein family HMM PF07994 YP_002753824.1 identified by match to protein family HMM PF09335 YP_002753825.1 identified by match to protein family HMM PF00730; match to protein family HMM TIGR01083 YP_002753827.1 identified by match to protein family HMM PF00128; match to protein family HMM PF02922; match to protein family HMM TIGR02100 YP_002753828.1 identified by match to protein family HMM PF02602 YP_002753829.1 identified by match to protein family HMM PF01379; match to protein family HMM PF03900; match to protein family HMM TIGR00212 YP_002753830.1 identified by match to protein family HMM PF00745; match to protein family HMM PF01488; match to protein family HMM PF05201; match to protein family HMM TIGR01035 YP_002753831.1 identified by match to protein family HMM PF01578 YP_002753832.1 identified by match to protein family HMM PF01925 YP_002753833.1 identified by glimmer; putative YP_002753834.1 This protein performs the mismatch recognition step during the DNA repair process YP_002753835.1 identified by match to protein family HMM PF00933 YP_002753836.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling YP_002753837.1 identified by match to protein family HMM PF00496 YP_002753838.1 identified by match to protein family HMM PF00166 YP_002753839.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth YP_002753840.1 identified by match to protein family HMM PF00355 YP_002753841.1 identified by glimmer; putative YP_002753843.1 identified by match to protein family HMM PF07685; match to protein family HMM TIGR01737 YP_002753844.1 identified by match to protein family HMM PF02811 YP_002753845.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF08659 YP_002753847.1 identified by similarity to GB:AAO28202.1; match to protein family HMM PF07715 YP_002753849.1 identified by glimmer; putative YP_002753850.1 identified by glimmer; putative YP_002753851.1 identified by match to protein family HMM PF01268 YP_002753852.1 identified by match to protein family HMM PF00873 YP_002753853.1 identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730 YP_002753854.1 identified by match to protein family HMM PF02321 YP_002753855.1 identified by similarity to GB:AAC27745.1; match to protein family HMM PF05096 YP_002753856.1 identified by match to protein family HMM PF00990; match to protein family HMM PF08448; match to protein family HMM TIGR00254 YP_002753858.1 identified by match to protein family HMM PF00450 YP_002753859.1 identified by similarity to SP:Q04664; match to protein family HMM PF02397; match to protein family HMM TIGR03025 YP_002753860.1 identified by match to protein family HMM PF00155 YP_002753861.1 identified by similarity to SP:P76658; match to protein family HMM PF00294; match to protein family HMM PF01467; match to protein family HMM TIGR00125; match to protein family HMM TIGR02198; match to protein family HMM TIGR02199 YP_002753862.1 identified by match to protein family HMM PF01380; match to protein family HMM TIGR00441 YP_002753863.1 identified by match to protein family HMM TIGR01656; match to protein family HMM TIGR01662 YP_002753864.1 identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM TIGR02197 YP_002753865.1 identified by similarity to GB:AAR35632.1; match to protein family HMM PF01075 YP_002753866.1 identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993 YP_002753867.1 identified by similarity to SP:O32271; match to protein family HMM PF00070; match to protein family HMM PF00984; match to protein family HMM PF01210; match to protein family HMM PF03720; match to protein family HMM PF03721; match to protein family HMM TIGR03026 YP_002753868.1 identified by match to protein family HMM PF00534 YP_002753871.1 identified by match to protein family HMM PF02563 YP_002753872.1 identified by match to protein family HMM PF02706 YP_002753873.1 identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254 YP_002753874.1 identified by glimmer; putative YP_002753875.1 identified by similarity to GB:AAV89598.1; match to protein family HMM PF04794 YP_002753876.1 identified by match to protein family HMM PF00534 YP_002753877.1 identified by match to protein family HMM PF02518; match to protein family HMM PF06580 YP_002753878.1 identified by match to protein family HMM PF00925; match to protein family HMM TIGR00505 YP_002753879.1 identified by match to protein family HMM PF00037; match to protein family HMM PF02754 YP_002753880.1 identified by match to protein family HMM PF01012 YP_002753881.1 identified by match to protein family HMM PF00766; match to protein family HMM PF01012 YP_002753883.1 identified by match to protein family HMM PF00596 YP_002753884.1 identified by match to protein family HMM PF00582 YP_002753886.1 identified by match to protein family HMM PF00440 YP_002753887.1 identified by similarity to GB:AAN56842.1 YP_002753888.1 identified by glimmer; putative YP_002753889.1 identified by match to protein family HMM PF05592 YP_002753890.1 identified by match to protein family HMM PF05738; match to protein family HMM PF07715 YP_002753891.1 identified by match to protein family HMM PF00754; match to protein family HMM PF02837 YP_002753892.1 identified by match to protein family HMM TIGR01573 YP_002753893.1 identified by match to protein family HMM PF01867; match to protein family HMM TIGR00287; match to protein family HMM TIGR03640 YP_002753894.1 identified by match to protein family HMM TIGR00372 YP_002753895.1 identified by match to protein family HMM PF05107; match to protein family HMM TIGR01595; match to protein family HMM TIGR02589 YP_002753896.1 identified by match to protein family HMM TIGR01863 YP_002753897.1 identified by match to protein family HMM TIGR01876; match to protein family HMM TIGR02593 YP_002753898.1 identified by glimmer; putative YP_002753899.1 identified by match to protein family HMM TIGR01587 YP_002753900.1 identified by glimmer; putative YP_002753901.1 xylose/proton symporter; member of the major facilitator superfamily (MFS) of transporter YP_002753902.1 identified by match to protein family HMM PF00356; match to protein family HMM PF00532 YP_002753903.1 identified by similarity to SP:P54495; match to protein family HMM PF00480 YP_002753904.1 identified by glimmer; putative YP_002753905.1 identified by match to protein family HMM PF00144; match to protein family HMM PF00768 YP_002753906.1 identified by glimmer; putative YP_002753907.1 identified by match to protein family HMM PF03167 YP_002753908.1 identified by match to protein family HMM PF01263 YP_002753910.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria YP_002753911.1 identified by glimmer; putative YP_002753912.1 identified by match to protein family HMM PF01541 YP_002753913.1 identified by match to protein family HMM PF01149; match to protein family HMM PF06827; match to protein family HMM PF06831 YP_002753914.1 identified by match to protein family HMM PF00226; match to protein family HMM PF00684; match to protein family HMM PF01556 YP_002753915.1 identified by match to protein family HMM PF00583 YP_002753916.1 identified by glimmer; putative YP_002753917.1 identified by match to protein family HMM PF00376 YP_002753918.1 identified by match to protein family HMM PF00535; match to protein family HMM TIGR03472 YP_002753919.1 identified by similarity to GB:AAK23085.1 YP_002753920.1 identified by glimmer; putative YP_002753921.1 identified by glimmer; putative YP_002753922.1 identified by match to protein family HMM PF00557 YP_002753925.1 identified by match to protein family HMM PF01266; match to protein family HMM PF01593; match to protein family HMM TIGR03467 YP_002753926.1 identified by match to protein family HMM PF00494 YP_002753927.1 identified by match to protein family HMM PF00494; match to protein family HMM TIGR03464 YP_002753928.1 identified by match to protein family HMM PF00107; match to protein family HMM PF08240 YP_002753929.1 identified by match to protein family HMM PF00107; match to protein family HMM PF08240 YP_002753931.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF05368; match to protein family HMM PF07993; match to protein family HMM PF08659; match to protein family HMM TIGR03466 YP_002753932.1 identified by match to protein family HMM PF06778 YP_002753933.1 identified by match to protein family HMM PF00501 YP_002753934.1 identified by glimmer; putative YP_002753935.1 identified by match to protein family HMM PF01943 YP_002753936.1 identified by match to protein family HMM PF00534 YP_002753937.1 identified by match to protein family HMM PF04932 YP_002753938.1 identified by match to protein family HMM PF02563 YP_002753939.1 identified by match to protein family HMM PF02706 YP_002753940.1 identified by match to protein family HMM PF00288; match to protein family HMM PF08544 YP_002753941.1 identified by match to protein family HMM PF00483 YP_002753942.1 identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993 YP_002753943.1 identified by match to protein family HMM PF00535 YP_002753944.1 identified by match to protein family HMM PF03808; match to protein family HMM TIGR00696 YP_002753945.1 similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity YP_002753946.1 identified by match to protein family HMM TIGR01656; match to protein family HMM TIGR01662 YP_002753947.1 identified by similarity to GB:AAK27851.1 YP_002753948.1 identified by match to protein family HMM PF00535 YP_002753949.1 identified by similarity to GB:AAF81229.1 YP_002753950.1 identified by match to protein family HMM PF00370; match to protein family HMM PF02782; match to protein family HMM TIGR01311 YP_002753951.1 identified by match to protein family HMM PF01266 YP_002753952.1 identified by similarity to SP:P18156; match to protein family HMM PF00230 YP_002753955.1 identified by match to protein family HMM PF00128; match to protein family HMM TIGR02456; match to protein family HMM TIGR02457 YP_002753956.1 identified by match to protein family HMM PF00128 YP_002753958.1 identified by match to protein family HMM PF00535 YP_002753959.1 identified by match to protein family HMM PF01152 YP_002753960.1 identified by similarity to SP:O07051; similarity to SP:P75823; match to protein family HMM PF00155; match to protein family HMM PF00266; match to protein family HMM PF01212 YP_002753961.1 identified by match to protein family HMM PF00190; match to protein family HMM PF07883 YP_002753962.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF05368; match to protein family HMM PF07993 YP_002753963.1 identified by similarity to GB:BAD65802.1 YP_002753964.1 identified by match to protein family HMM PF05738; match to protein family HMM TIGR03304 YP_002753965.1 identified by glimmer; putative YP_002753966.1 identified by match to protein family HMM PF00324 YP_002753967.1 identified by match to protein family HMM PF00801; match to protein family HMM PF02065 YP_002753968.1 identified by match to protein family HMM PF00392; match to protein family HMM PF00455; match to protein family HMM PF08220; match to protein family HMM PF08279 YP_002753969.1 identified by match to protein family HMM PF00294 YP_002753971.1 identified by match to protein family HMM PF08013; match to protein family HMM TIGR02810 YP_002753972.1 identified by similarity to SP:P23908; match to protein family HMM PF01546 YP_002753973.1 identified by similarity to GB:CAE13135.1 YP_002753974.1 identified by match to protein family HMM PF00575 YP_002753975.1 identified by match to protein family HMM PF02449; match to protein family HMM PF08532 YP_002753976.1 identified by glimmer; putative YP_002753977.1 identified by match to protein family HMM PF01120 YP_002753979.1 identified by similarity to PIR:B95301 YP_002753980.1 identified by glimmer; putative YP_002753981.1 identified by glimmer; putative YP_002753982.1 identified by match to protein family HMM PF00652 YP_002753983.1 identified by match to protein family HMM PF02687; match to protein family HMM TIGR03434 YP_002753984.1 identified by match to protein family HMM PF03551; match to protein family HMM TIGR03433 YP_002753985.1 identified by match to protein family HMM PF00849; match to protein family HMM TIGR00005 YP_002753986.1 identified by glimmer; putative YP_002753987.1 identified by similarity to SP:Q9P999; match to protein family HMM PF01055 YP_002753988.1 identified by glimmer; putative YP_002753989.1 identified by glimmer; putative YP_002753990.1 identified by glimmer; putative YP_002753991.1 identified by match to protein family HMM PF00515; match to protein family HMM PF07719 YP_002753992.1 identified by glimmer; putative YP_002753993.1 identified by similarity to SP:P22873; match to protein family HMM PF00348 YP_002753994.1 identified by match to protein family HMM PF02687 YP_002753995.1 identified by match to protein family HMM PF00005 YP_002753997.1 identified by glimmer; putative YP_002753998.1 identified by glimmer; putative YP_002753999.1 identified by match to protein family HMM PF02433 YP_002754000.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM PF08447; match to protein family HMM PF08448 YP_002754001.1 identified by match to protein family HMM PF00072 YP_002754002.1 identified by similarity to GB:AAM00282.1; match to protein family HMM PF00360; match to protein family HMM PF00512; match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM PF08446 YP_002754003.1 identified by match to protein family HMM PF01126 YP_002754004.1 identified by match to protein family HMM PF00990; match to protein family HMM PF07494; match to protein family HMM PF07495; match to protein family HMM TIGR00254 YP_002754005.1 identified by match to protein family HMM PF02687 YP_002754006.1 identified by match to protein family HMM PF00005 YP_002754007.1 identified by similarity to SP:P29679; match to protein family HMM PF00657 YP_002754008.1 identified by match to protein family HMM PF01509; match to protein family HMM TIGR00431 YP_002754009.1 identified by match to protein family HMM PF01227; match to protein family HMM TIGR00063 YP_002754010.1 identified by match to protein family HMM PF00535 YP_002754011.1 identified by match to protein family HMM PF00578; match to protein family HMM PF08534 YP_002754012.1 identified by glimmer; putative YP_002754013.1 identified by match to protein family HMM PF08543; match to protein family HMM TIGR00097 YP_002754014.1 identified by match to protein family HMM PF03330; match to protein family HMM TIGR00413 YP_002754015.1 identified by match to protein family HMM PF00215; match to protein family HMM TIGR01740 YP_002754016.1 identified by match to protein family HMM PF02687 YP_002754017.1 identified by match to protein family HMM PF02687 YP_002754018.1 identified by similarity to SP:P23552; match to protein family HMM PF01229 YP_002754019.1 identified by match to protein family HMM PF02449; match to protein family HMM PF08532 YP_002754020.1 identified by match to protein family HMM PF05738 YP_002754022.1 identified by glimmer; putative YP_002754023.1 identified by match to protein family HMM PF04055; match to protein family HMM TIGR00423; match to protein family HMM TIGR03700 YP_002754024.1 identified by glimmer; putative YP_002754025.1 identified by match to protein family HMM PF00583 YP_002754026.1 identified by match to protein family HMM PF02012; match to protein family HMM PF07494 YP_002754027.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen YP_002754028.1 identified by match to protein family HMM PF00909; match to protein family HMM TIGR00836 YP_002754029.1 identified by match to protein family HMM PF00543 YP_002754030.1 identified by match to protein family HMM PF01842; match to protein family HMM PF08335 YP_002754031.1 identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM PF03707; match to protein family HMM TIGR00254 YP_002754033.1 identified by match to protein family HMM PF02225; match to protein family HMM PF04253; match to protein family HMM PF04389 YP_002754034.1 identified by glimmer; putative YP_002754035.1 identified by match to protein family HMM PF01741; match to protein family HMM TIGR00220 YP_002754036.1 identified by match to protein family HMM PF01144; match to protein family HMM TIGR02429 YP_002754037.1 identified by glimmer; putative YP_002754038.1 identified by similarity to GB:CAA51373.1; match to protein family HMM PF01144; match to protein family HMM TIGR02428 YP_002754040.1 identified by match to protein family HMM PF00580 YP_002754041.1 identified by match to protein family HMM PF01895; match to protein family HMM TIGR02135 YP_002754042.1 identified by match to protein family HMM PF00005; match to protein family HMM TIGR00972 YP_002754043.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF00989; match to protein family HMM PF02518 YP_002754044.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00486 YP_002754045.1 identified by match to protein family HMM PF00072 YP_002754046.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM PF08448; match to protein family HMM TIGR00229 YP_002754047.1 identified by match to protein family HMM PF01894; match to protein family HMM TIGR00149 YP_002754048.1 identified by match to protein family HMM PF00753 YP_002754049.1 identified by glimmer; putative YP_002754051.1 identified by similarity to GB:AAF86624.1; match to protein family HMM PF00106; match to protein family HMM PF07993; match to protein family HMM PF08659 YP_002754052.1 identified by similarity to SP:O31705; match to protein family HMM PF02391; match to protein family HMM PF02597; match to protein family HMM TIGR01682 YP_002754053.1 identified by match to protein family HMM PF00092; match to protein family HMM TIGR03436 YP_002754054.1 identified by glimmer; putative YP_002754055.1 identified by match to protein family HMM PF00459 YP_002754056.1 identified by match to protein family HMM PF00037 YP_002754057.1 identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937 YP_002754058.1 identified by match to protein family HMM PF01202 YP_002754059.1 identified by match to protein family HMM PF01594 YP_002754060.1 identified by glimmer; putative YP_002754061.1 identified by match to protein family HMM PF01040; match to protein family HMM TIGR01473 YP_002754062.1 identified by match to protein family HMM PF00005 YP_002754063.1 identified by match to protein family HMM PF01061 YP_002754064.1 identified by match to protein family HMM PF04238 YP_002754065.1 identified by glimmer; putative YP_002754066.1 identified by similarity to SP:P28046; match to protein family HMM PF00436; match to protein family HMM TIGR00621 YP_002754067.1 identified by glimmer; putative YP_002754068.1 identified by similarity to SP:P07365; match to protein family HMM PF01584 YP_002754069.1 identified by match to protein family HMM PF00015 YP_002754070.1 identified by similarity to SP:P07363; match to protein family HMM PF01584; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM PF02895 YP_002754071.1 identified by match to protein family HMM PF01739; match to protein family HMM PF03705 YP_002754072.1 identified by similarity to SP:P40404; match to protein family HMM PF03975 YP_002754073.1 identified by match to protein family HMM PF00072 YP_002754076.1 identified by match to protein family HMM PF00072; match to protein family HMM PF01339 YP_002754077.1 identified by match to protein family HMM PF02154 YP_002754078.1 identified by similarity to SP:P06143; match to protein family HMM PF00072 YP_002754079.1 identified by similarity to GB:AAR33736.1 YP_002754080.1 identified by glimmer; putative YP_002754081.1 identified by glimmer; putative YP_002754082.1 identified by match to protein family HMM PF01266; match to protein family HMM PF01593 YP_002754083.1 identified by match to protein family HMM PF02629 YP_002754084.1 identified by similarity to SP:P36655 YP_002754085.1 identified by glimmer; putative YP_002754086.1 identified by match to protein family HMM PF00004 YP_002754087.1 identified by match to protein family HMM PF00588; match to protein family HMM PF08032 YP_002754088.1 identified by match to protein family HMM PF01300; match to protein family HMM TIGR00057 YP_002754089.1 identified by match to protein family HMM PF02698 YP_002754090.1 identified by match to protein family HMM PF01940 YP_002754092.1 identified by match to protein family HMM PF00128 YP_002754093.1 catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate YP_002754094.1 identified by match to protein family HMM PF00150 YP_002754095.1 identified by match to protein family HMM PF02834; match to protein family HMM TIGR02258 YP_002754096.1 identified by match to protein family HMM PF05299 YP_002754097.1 catalyzes the formation of 2-oxoglutarate from isocitrate YP_002754098.1 identified by glimmer; putative YP_002754099.1 identified by match to protein family HMM PF03412 YP_002754100.1 identified by glimmer; putative YP_002754101.1 identified by similarity to PIR:S75830 YP_002754102.1 identified by similarity to GB:CAC41728.1; match to protein family HMM PF05974 YP_002754103.1 identified by similarity to SP:P60355; match to protein family HMM PF05067 YP_002754104.1 identified by glimmer; putative YP_002754105.1 identified by similarity to GB:AAQ95743.1 YP_002754106.1 identified by glimmer; putative YP_002754107.1 identified by match to protein family HMM PF01368; match to protein family HMM PF02272; match to protein family HMM TIGR00644 YP_002754108.1 identified by match to protein family HMM PF02585 YP_002754109.1 identified by glimmer; putative YP_002754110.1 catalyzes the formation of 5,10-methylenetetrahydrofolate from 5-methyltetrahydrofolate and S-adenosyl-L-homocysteine and methionine from S-adenosyl-L-methionine and L-homocysteine; expressed in B. subtilis under methionine starvation conditions YP_002754111.1 identified by similarity to SP:P22938; match to protein family HMM PF02609; match to protein family HMM TIGR01280 YP_002754112.1 identified by match to protein family HMM PF01053; match to protein family HMM PF01212 YP_002754113.1 identified by match to protein family HMM PF00291; match to protein family HMM TIGR01136; match to protein family HMM TIGR01139 YP_002754114.1 identified by match to protein family HMM PF00092; match to protein family HMM TIGR03436 YP_002754115.1 identified by similarity to SP:P50864; match to protein family HMM PF01520 YP_002754117.1 identified by glimmer; putative YP_002754118.1 identified by match to protein family HMM PF01177; match to protein family HMM TIGR00067 YP_002754119.1 identified by similarity to SP:P54616; match to protein family HMM PF00106 YP_002754120.1 identified by match to protein family HMM PF00759 YP_002754121.1 identified by similarity to GB:AAU47468.1; match to protein family HMM PF03928 YP_002754122.1 identified by match to protein family HMM PF01118 YP_002754123.1 identified by match to protein family HMM PF01066; match to protein family HMM TIGR00473 YP_002754124.1 identified by match to protein family HMM PF02666; match to protein family HMM TIGR00164 YP_002754125.1 identified by glimmer; putative YP_002754126.1 identified by match to protein family HMM PF00583 YP_002754127.1 identified by match to protein family HMM PF00814 YP_002754128.1 identified by similarity to SP:Q96PE7; match to protein family HMM PF00903; match to protein family HMM TIGR03081 YP_002754129.1 identified by match to protein family HMM PF03308; match to protein family HMM TIGR00750 YP_002754130.1 identified by similarity to GB:AAT32910.1 YP_002754131.1 identified by similarity to SP:P45867; match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028 YP_002754132.1 identified by similarity to GB:AAF81068.1; match to protein family HMM PF00481 YP_002754133.1 identified by match to protein family HMM PF02823; match to protein family HMM TIGR01216 YP_002754134.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit YP_002754135.1 identified by match to protein family HMM PF00231; match to protein family HMM TIGR01146 YP_002754136.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit YP_002754137.1 identified by match to protein family HMM PF00213; match to protein family HMM TIGR01145 YP_002754138.1 identified by match to protein family HMM PF00430 YP_002754139.1 identified by match to protein family HMM PF00430 YP_002754140.1 identified by match to protein family HMM PF01926; match to protein family HMM TIGR03156 YP_002754141.1 identified by match to protein family HMM PF01423; match to protein family HMM TIGR02383 YP_002754143.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family YP_002754144.1 identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880 YP_002754145.1 identified by match to protein family HMM PF00483 YP_002754146.1 identified by match to protein family HMM PF01238 YP_002754147.1 identified by match to protein family HMM TIGR02276 YP_002754148.1 identified by match to protein family HMM PF00535 YP_002754149.1 identified by match to protein family HMM PF04055 YP_002754150.1 identified by match to protein family HMM PF02366 YP_002754151.1 identified by match to protein family HMM PF00310; match to protein family HMM PF00733; match to protein family HMM TIGR01536 YP_002754152.1 identified by glimmer; putative YP_002754153.1 identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737 YP_002754155.1 identified by match to protein family HMM PF00483; match to protein family HMM TIGR01173 YP_002754156.1 identified by match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937 YP_002754157.1 identified by match to protein family HMM PF00072; match to protein family HMM PF01966; match to protein family HMM TIGR00277 YP_002754158.1 identified by match to protein family HMM PF01329 YP_002754159.1 identified by glimmer; putative YP_002754160.1 identified by match to protein family HMM PF00462 YP_002754161.1 identified by match to protein family HMM PF00472; match to protein family HMM PF03462; match to protein family HMM TIGR00020 YP_002754162.1 identified by match to protein family HMM PF03631; match to protein family HMM TIGR00765 YP_002754163.1 identified by match to protein family HMM PF03741 YP_002754164.1 identified by match to protein family HMM PF04972 YP_002754165.1 identified by match to protein family HMM PF00149 YP_002754166.1 identified by match to protein family HMM PF00639 YP_002754167.1 amylomaltase; acts to release glucose from maltodextrins YP_002754168.1 identified by match to protein family HMM PF04456 YP_002754169.1 identified by glimmer; putative YP_002754170.1 identified by match to protein family HMM PF02409; match to protein family HMM TIGR00027 YP_002754171.1 identified by similarity to SP:P32731; match to protein family HMM PF02033; match to protein family HMM TIGR00082 YP_002754172.1 identified by match to protein family HMM PF01368; match to protein family HMM PF02272 YP_002754173.1 identified by match to protein family HMM PF02366 YP_002754174.1 identified by match to protein family HMM PF00583 YP_002754175.1 identified by glimmer; putative YP_002754176.1 identified by glimmer; putative YP_002754177.1 identified by similarity to GB:CAD48309.1; match to protein family HMM PF00933; match to protein family HMM PF01915 YP_002754178.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00196; match to protein family HMM PF08281 YP_002754179.1 identified by match to protein family HMM PF02518; match to protein family HMM PF07730 YP_002754180.1 identified by match to protein family HMM PF01061 YP_002754181.1 identified by match to protein family HMM PF00005 YP_002754182.1 identified by match to protein family HMM PF03551 YP_002754183.1 identified by glimmer; putative YP_002754184.1 identified by match to protein family HMM PF00905 YP_002754185.1 identified by similarity to SP:P17865; match to protein family HMM PF00091; match to protein family HMM PF03953; match to protein family HMM TIGR00065 YP_002754186.1 identified by match to protein family HMM PF02491; match to protein family HMM TIGR01174 YP_002754187.1 identified by glimmer; putative YP_002754188.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis YP_002754189.1 identified by glimmer; putative YP_002754190.1 identified by glimmer; putative YP_002754191.1 identified by match to protein family HMM PF03033; match to protein family HMM PF04101; match to protein family HMM TIGR01133 YP_002754192.1 identified by match to protein family HMM PF01098; match to protein family HMM TIGR02614 YP_002754193.1 identified by match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01087 YP_002754194.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan YP_002754195.1 identified by similarity to SP:P96613; match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01143 YP_002754196.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate YP_002754197.1 identified by match to protein family HMM PF00905; match to protein family HMM PF03717; match to protein family HMM PF03793 YP_002754198.1 identified by glimmer; putative YP_002754199.1 identified by match to protein family HMM PF01795; match to protein family HMM TIGR00006 YP_002754200.1 identified by match to protein family HMM PF02381 YP_002754201.1 identified by similarity to PIR:A82182 YP_002754202.1 identified by similarity to GB:AAR33804.1 YP_002754203.1 identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07720 YP_002754204.1 identified by match to protein family HMM PF01966; match to protein family HMM TIGR01353 YP_002754205.1 identified by match to protein family HMM PF07811 YP_002754206.1 identified by glimmer; putative YP_002754207.1 identified by glimmer; putative YP_002754208.1 identified by glimmer; putative YP_002754209.1 identified by match to protein family HMM PF01478 YP_002754210.1 identified by match to protein family HMM PF08666; match to protein family HMM TIGR03177 YP_002754211.1 identified by similarity to GB:CAE29119.1; match to protein family HMM PF00263; match to protein family HMM PF04972; match to protein family HMM TIGR01409 YP_002754213.1 identified by match to protein family HMM PF00437 YP_002754214.1 identified by match to protein family HMM PF00482 YP_002754215.1 identified by match to protein family HMM PF00482 YP_002754216.1 identified by glimmer; putative YP_002754217.1 identified by match to protein family HMM PF02643 YP_002754219.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway YP_002754220.1 identified by glimmer; putative YP_002754221.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase YP_002754222.1 identified by similarity to SP:P12638; match to protein family HMM PF01261; match to protein family HMM TIGR00587 YP_002754223.1 identified by match to protein family HMM PF01979; match to protein family HMM TIGR00221 YP_002754224.1 identified by similarity to PIR:AG1905 YP_002754225.1 identified by glimmer; putative YP_002754227.1 identified by match to protein family HMM PF01263 YP_002754228.1 identified by match to protein family HMM PF00294 YP_002754229.1 identified by match to protein family HMM PF01081; match to protein family HMM TIGR01182 YP_002754230.1 identified by match to protein family HMM PF01188; match to protein family HMM PF02746 YP_002754231.1 identified by match to protein family HMM PF00480 YP_002754232.1 identified by similarity to SP:P50199; match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF08659 YP_002754233.1 identified by match to protein family HMM TIGR01730 YP_002754234.1 identified by match to protein family HMM PF00873 YP_002754235.1 identified by match to protein family HMM PF02321 YP_002754236.1 identified by glimmer; putative YP_002754237.1 identified by glimmer; putative YP_002754238.1 identified by glimmer; putative YP_002754240.1 identified by glimmer; putative YP_002754242.1 identified by glimmer; putative YP_002754243.1 identified by similarity to GB:AAO54557.1 YP_002754244.1 identified by glimmer; putative YP_002754245.1 identified by match to protein family HMM PF00756 YP_002754246.1 identified by similarity to GB:AAC38456.1; match to protein family HMM PF06964 YP_002754247.1 identified by glimmer; putative YP_002754248.1 identified by similarity to GB:AAM30985.1 YP_002754249.1 identified by match to protein family HMM PF00534 YP_002754250.1 identified by glimmer; putative YP_002754251.1 identified by match to protein family HMM PF00975 YP_002754252.1 identified by glimmer; putative YP_002754253.1 identified by glimmer; putative YP_002754254.1 identified by glimmer; putative YP_002754255.1 identified by glimmer; putative YP_002754256.1 identified by match to protein family HMM PF00291; match to protein family HMM PF02423 YP_002754257.1 identified by match to protein family HMM PF00106; match to protein family HMM PF00296; match to protein family HMM PF00550; match to protein family HMM PF01370; match to protein family HMM PF08659 YP_002754258.1 identified by match to protein family HMM PF00109; match to protein family HMM PF00202; match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF00698; match to protein family HMM PF02801; match to protein family HMM TIGR01733 YP_002754261.1 identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF00975; match to protein family HMM TIGR01733 YP_002754262.1 identified by match to protein family HMM PF01755 YP_002754263.1 identified by match to protein family HMM PF01565 YP_002754264.1 identified by similarity to GB:AAF19809.1; match to protein family HMM PF01648 YP_002754265.1 identified by match to protein family HMM PF01583; match to protein family HMM TIGR00455 YP_002754266.1 identified by glimmer; putative YP_002754267.1 identified by glimmer; putative YP_002754268.1 identified by glimmer; putative YP_002754269.1 identified by match to protein family HMM PF00005; match to protein family HMM PF00664 YP_002754270.1 identified by match to protein family HMM PF00535 YP_002754271.1 identified by match to protein family HMM PF00515; match to protein family HMM PF07719 YP_002754272.1 identified by match to protein family HMM PF01391; match to protein family HMM PF02839 YP_002754273.1 identified by match to protein family HMM PF07484 YP_002754274.1 identified by match to protein family HMM PF00583 YP_002754275.1 identified by glimmer; putative YP_002754276.1 identified by glimmer; putative YP_002754277.1 identified by glimmer; putative YP_002754278.1 identified by glimmer; putative YP_002754279.1 identified by glimmer; putative YP_002754280.1 identified by similarity to GB:CAI30159.1 YP_002754281.1 identified by glimmer; putative YP_002754283.1 identified by match to protein family HMM PF03524 YP_002754284.1 identified by match to protein family HMM PF03743 YP_002754285.1 identified by glimmer; putative YP_002754288.1 identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621 YP_002754289.1 identified by match to protein family HMM PF00437 YP_002754290.1 identified by glimmer; putative YP_002754291.1 identified by glimmer; putative YP_002754292.1 identified by similarity to GB:CAH17350.1 YP_002754293.1 identified by match to protein family HMM PF08751; match to protein family HMM TIGR02686 YP_002754294.1 identified by match to protein family HMM PF01609 YP_002754295.1 identified by match to protein family HMM PF08241; match to protein family HMM PF08242 YP_002754296.1 identified by glimmer; putative YP_002754297.1 identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525 YP_002754298.1 identified by match to protein family HMM PF03773 YP_002754299.1 identified by match to protein family HMM PF02683 YP_002754300.1 identified by similarity to SP:P38054; match to protein family HMM PF00873; match to protein family HMM TIGR00914 YP_002754301.1 identified by similarity to SP:P77239; match to protein family HMM TIGR01730 YP_002754302.1 identified by match to protein family HMM PF02321 YP_002754303.1 identified by glimmer; putative YP_002754304.1 identified by match to protein family HMM PF01022 YP_002754305.1 catalyzes the formation of methyl-coenzyme M and tetrahydromethanopterin from coenzyme M and methyl-tetrahydromethanopterin; involved in methanogenesis from carbon dioxide YP_002754306.1 identified by glimmer; putative YP_002754307.1 identified by match to protein family HMM PF02683 YP_002754309.1 identified by similarity to SP:P37279; match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM PF04945; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525 YP_002754310.1 identified by match to protein family HMM PF04542; match to protein family HMM PF08281; match to protein family HMM TIGR02937 YP_002754312.1 identified by match to protein family HMM PF05275 YP_002754313.1 identified by similarity to SP:P12374; match to protein family HMM PF00394; match to protein family HMM PF07731; match to protein family HMM PF07732; match to protein family HMM TIGR01409; match to protein family HMM TIGR01480 YP_002754314.1 identified by glimmer; putative YP_002754315.1 identified by similarity to GB:AAL23323.1; match to protein family HMM PF03625 YP_002754317.1 identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937 YP_002754318.1 identified by glimmer; putative YP_002754319.1 identified by similarity to GB:AAV44702.1 YP_002754320.1 identified by glimmer; putative YP_002754321.1 identified by match to protein family HMM PF02195; match to protein family HMM TIGR00180 YP_002754322.1 identified by match to protein family HMM PF00376; match to protein family HMM PF09278 YP_002754323.1 identified by glimmer; putative YP_002754324.1 identified by glimmer; putative YP_002754325.1 identified by glimmer; putative YP_002754326.1 identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992 YP_002754327.1 identified by match to protein family HMM PF00403; match to protein family HMM TIGR02052 YP_002754328.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466 YP_002754329.1 identified by match to protein family HMM PF00589 YP_002754330.1 identified by glimmer; putative YP_002754331.1 identified by glimmer; putative YP_002754332.1 identified by similarity to GB:AAM37395.1 YP_002754333.1 identified by match to protein family HMM PF03446; match to protein family HMM PF03807; match to protein family HMM TIGR00112 YP_002754334.1 identified by match to protein family HMM PF02628 YP_002754335.1 identified by glimmer; putative YP_002754336.1 identified by match to protein family HMM PF02449; match to protein family HMM PF08532; match to protein family HMM PF08533 YP_002754337.1 identified by similarity to SP:Q05146; match to protein family HMM PF00691 YP_002754338.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision YP_002754339.1 identified by glimmer; putative YP_002754340.1 identified by similarity to SP:P22900 YP_002754341.1 identified by similarity to GB:AAM28387.1 YP_002754342.1 identified by similarity to GB:AAF81068.1; match to protein family HMM PF00481 YP_002754343.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00486 YP_002754344.1 identified by match to protein family HMM PF00120; match to protein family HMM PF03951 YP_002754345.1 identified by similarity to PDB:1MRU_A; match to protein family HMM PF00069 YP_002754346.1 identified by similarity to SP:Q07429; match to protein family HMM PF00909 YP_002754347.1 identified by similarity to SP:P26235; match to protein family HMM PF00999 YP_002754348.1 identified by glimmer; putative YP_002754349.1 identified by match to protein family HMM PF00909; match to protein family HMM TIGR00836 YP_002754350.1 identified by glimmer; putative YP_002754351.1 identified by similarity to GB:AAS70517.1 YP_002754352.1 identified by glimmer; putative YP_002754353.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00486 YP_002754354.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518 YP_002754355.1 identified by match to protein family HMM PF05738; match to protein family HMM TIGR03304 YP_002754356.1 identified by match to protein family HMM PF00532 YP_002754357.1 identified by match to protein family HMM PF00703; match to protein family HMM PF02837 YP_002754358.1 The CAT family is a member of the Amino Acid-Polyamine-Organocation (APC) Superfamily.; identified by match to protein family HMM PF00324 YP_002754359.1 identified by similarity to SP:P37967; match to protein family HMM PF00135 YP_002754360.1 identified by match to protein family HMM PF00535 YP_002754361.1 identified by glimmer; putative YP_002754362.1 identified by glimmer; putative YP_002754363.1 identified by match to protein family HMM PF07944; match to protein family HMM TIGR01409 YP_002754364.1 identified by match to protein family HMM PF05960 YP_002754365.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive YP_002754367.1 identified by match to protein family HMM PF02424 YP_002754368.1 identified by match to protein family HMM PF04205 YP_002754370.1 identified by match to protein family HMM PF03171 YP_002754371.1 identified by match to protein family HMM PF00593; match to protein family HMM PF07715 YP_002754372.1 identified by similarity to SP:P37967; match to protein family HMM PF00135 YP_002754373.1 identified by match to protein family HMM PF00106; match to protein family HMM PF08659 YP_002754374.1 identified by similarity to GB:CAD92931.1 YP_002754375.1 identified by match to protein family HMM PF00578; match to protein family HMM PF08534 YP_002754376.1 identified by similarity to GB:AAF02539.1; match to protein family HMM PF00724 YP_002754377.1 identified by glimmer; putative YP_002754378.1 identified by match to protein family HMM PF00440 YP_002754379.1 identified by similarity to GB:BAB49834.1 YP_002754380.1 identified by similarity to SP:P38370; match to protein family HMM PF07715 YP_002754381.1 identified by similarity to GB:AAM38208.1 YP_002754382.1 identified by glimmer; putative YP_002754383.1 identified by similarity to SP:P42790; match to protein family HMM PF09286 YP_002754384.1 identified by match to protein family HMM PF02518; match to protein family HMM PF07494; match to protein family HMM PF07495; match to protein family HMM PF07730 YP_002754385.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00196 YP_002754386.1 identified by glimmer; putative YP_002754387.1 identified by match to protein family HMM PF00392 YP_002754388.1 identified by match to protein family HMM PF07858 YP_002754389.1 identified by glimmer; putative YP_002754390.1 identified by match to protein family HMM TIGR00305 YP_002754391.1 identified by glimmer; putative YP_002754392.1 identified by similarity to SP:P42790; match to protein family HMM PF00082; match to protein family HMM PF09286 YP_002754393.1 identified by match to protein family HMM PF05345 YP_002754394.1 identified by similarity to SP:P43015; match to protein family HMM PF00486; match to protein family HMM PF07719 YP_002754395.1 identified by glimmer; putative YP_002754396.1 identified by match to protein family HMM PF01548; match to protein family HMM PF02371 YP_002754397.1 identified by glimmer; putative YP_002754398.1 identified by match to protein family HMM PF02321 YP_002754399.1 The Drug:H+ Antiporter-2 (14 Spanner) (DHA2) Family is a member of the Major Facilitator Superfamily (MFS).; identified by match to protein family HMM PF07690 YP_002754400.1 identified by match to protein family HMM PF00529 YP_002754401.1 identified by similarity to GB:CAD16955.1 YP_002754402.1 identified by similarity to PIR:F95305; match to protein family HMM PF07719 YP_002754403.1 identified by glimmer; putative YP_002754404.1 identified by match to protein family HMM PF04542; match to protein family HMM PF08281; match to protein family HMM TIGR02937 YP_002754405.1 identified by match to protein family HMM PF00070; match to protein family HMM PF07992 YP_002754406.1 identified by similarity to GB:AAO57780.1 YP_002754407.1 identified by similarity to GB:AAS46706.1 YP_002754409.1 identified by glimmer; putative YP_002754410.1 identified by glimmer; putative YP_002754411.1 identified by similarity to SP:P20906; match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776 YP_002754412.1 identified by match to protein family HMM PF00107; match to protein family HMM PF08240 YP_002754413.1 identified by match to protein family HMM PF00171 YP_002754414.1 identified by match to protein family HMM PF02518; match to protein family HMM PF07494; match to protein family HMM PF07495; match to protein family HMM PF07730 YP_002754415.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00196; match to protein family HMM PF08279; match to protein family HMM PF08281 YP_002754416.1 identified by similarity to PIR:B95301 YP_002754417.1 identified by glimmer; putative YP_002754418.1 identified by match to protein family HMM PF02518; match to protein family HMM PF07494; match to protein family HMM PF07495; match to protein family HMM PF07730 YP_002754419.1 identified by match to protein family HMM PF00665 YP_002754420.1 identified by match to protein family HMM PF01527 YP_002754421.1 identified by glimmer; putative YP_002754422.1 identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937 YP_002754423.1 identified by glimmer; putative YP_002754426.1 identified by match to protein family HMM PF01619 YP_002754427.1 identified by match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM TIGR00254 YP_002754428.1 identified by glimmer; putative YP_002754429.1 identified by match to protein family HMM PF00881 YP_002754430.1 identified by glimmer; putative YP_002754431.1 identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730 YP_002754432.1 identified by match to protein family HMM PF00873; match to protein family HMM TIGR00915 YP_002754433.1 identified by similarity to SP:Q51487; match to protein family HMM PF02321; match to protein family HMM TIGR01845 YP_002754434.1 identified by match to protein family HMM PF01869 YP_002754435.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690 YP_002754436.1 identified by similarity to GB:BAA21669.1; match to protein family HMM PF01301; match to protein family HMM PF02449 YP_002754437.1 identified by match to protein family HMM TIGR01409 YP_002754438.1 identified by match to protein family HMM PF00455; match to protein family HMM PF01978; match to protein family HMM PF08220 YP_002754439.1 identified by match to protein family HMM PF03932 YP_002754440.1 identified by similarity to SP:P38370; match to protein family HMM TIGR03304 YP_002754442.1 identified by match to protein family HMM PF03551 YP_002754443.1 identified by glimmer; putative YP_002754444.1 identified by match to protein family HMM PF01839; match to protein family HMM PF07593 YP_002754445.1 identified by match to protein family HMM PF00515; match to protein family HMM PF07719 YP_002754446.1 identified by match to protein family HMM PF02012 YP_002754447.1 identified by match to protein family HMM PF02012 YP_002754448.1 identified by match to protein family HMM PF02012 YP_002754449.1 identified by match to protein family HMM PF04055 YP_002754450.1 identified by match to protein family HMM PF00534 YP_002754451.1 identified by similarity to SP:O48917; match to protein family HMM PF01370 YP_002754452.1 identified by similarity to GB:BAC89664.1 YP_002754453.1 identified by match to protein family HMM TIGR01764 YP_002754454.1 identified by glimmer; putative YP_002754455.1 identified by glimmer; putative YP_002754456.1 identified by glimmer; putative YP_002754457.1 identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730 YP_002754458.1 identified by match to protein family HMM PF00005 YP_002754459.1 identified by match to protein family HMM PF06439 YP_002754460.1 identified by similarity to SP:P12043; match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR00878 YP_002754461.1 identified by glimmer; putative YP_002754462.1 identified by match to protein family HMM PF02661 YP_002754463.1 identified by match to protein family HMM PF00551; match to protein family HMM TIGR00639 YP_002754464.1 identified by match to protein family HMM PF00027; match to protein family HMM PF06210 YP_002754465.1 identified by glimmer; putative YP_002754466.1 identified by glimmer; putative YP_002754467.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group YP_002754468.1 identified by match to protein family HMM PF01467; match to protein family HMM TIGR00125; match to protein family HMM TIGR00482 YP_002754469.1 identified by glimmer; putative YP_002754470.1 identified by match to protein family HMM PF02410; match to protein family HMM TIGR00090 YP_002754471.1 identified by match to protein family HMM TIGR01352 YP_002754473.1 identified by match to protein family HMM PF07992 YP_002754474.1 identified by match to protein family HMM PF00665 YP_002754475.1 identified by match to protein family HMM PF00772; match to protein family HMM PF03796; match to protein family HMM TIGR00665 YP_002754476.1 identified by match to protein family HMM PF00156; match to protein family HMM PF00310; match to protein family HMM TIGR01134 YP_002754477.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis YP_002754478.1 converts homocysteine and S-adenosyl-methionine to methionine and S-adenosyl-homocysteine or S-methyl-methionine and homocysteine to two methionines YP_002754479.1 identified by match to protein family HMM PF00691 YP_002754480.1 identified by match to protein family HMM PF05345 YP_002754481.1 identified by glimmer; putative YP_002754482.1 identified by match to protein family HMM PF03551; match to protein family HMM TIGR03433 YP_002754483.1 identified by match to protein family HMM PF02687; match to protein family HMM TIGR03434 YP_002754484.1 identified by match to protein family HMM PF05738; match to protein family HMM TIGR03304 YP_002754485.1 identified by match to protein family HMM PF07971; match to protein family HMM TIGR01180 YP_002754486.1 identified by glimmer; putative YP_002754487.1 identified by match to protein family HMM PF00291; match to protein family HMM PF01842; match to protein family HMM TIGR01127 YP_002754488.1 identified by match to protein family HMM PF00440 YP_002754489.1 identified by match to protein family HMM PF00857 YP_002754490.1 identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711 YP_002754491.1 identified by match to protein family HMM PF00892 YP_002754492.1 identified by match to protein family HMM PF02321 YP_002754493.1 identified by match to protein family HMM PF00873 YP_002754494.1 identified by similarity to SP:P37636; match to protein family HMM PF00529; match to protein family HMM TIGR01730 YP_002754495.1 identified by glimmer; putative YP_002754496.1 identified by match to protein family HMM PF02566 YP_002754497.1 identified by glimmer; putative YP_002754498.1 identified by match to protein family HMM PF01209; match to protein family HMM PF08241; match to protein family HMM PF08242 YP_002754499.1 identified by similarity to GB:AAR33728.1 YP_002754500.1 identified by match to protein family HMM PF00873 YP_002754501.1 identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730 YP_002754502.1 identified by match to protein family HMM PF02321 YP_002754503.1 identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937 YP_002754504.1 identified by similarity to SP:P37967; match to protein family HMM PF00135 YP_002754505.1 identified by glimmer; putative YP_002754506.1 identified by match to protein family HMM PF00561; match to protein family HMM PF02627 YP_002754507.1 identified by match to protein family HMM PF00440 YP_002754508.1 is a component of the macrolide binding site in the peptidyl transferase center YP_002754509.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme YP_002754510.1 identified by match to protein family HMM PF00163; match to protein family HMM PF01479; match to protein family HMM TIGR01017 YP_002754511.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3 YP_002754512.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA YP_002754513.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif YP_002754514.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3 YP_002754515.1 identified by match to protein family HMM PF00557; match to protein family HMM TIGR00500 YP_002754516.1 identified by similarity to SP:P16304; match to protein family HMM PF00406; match to protein family HMM PF05191; match to protein family HMM TIGR01351 YP_002754517.1 identified by similarity to SP:P03844; match to protein family HMM PF00344; match to protein family HMM TIGR00967 YP_002754518.1 late assembly protein YP_002754519.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7 YP_002754520.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance YP_002754521.1 identified by match to protein family HMM PF00861; match to protein family HMM TIGR00060 YP_002754522.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance YP_002754523.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit YP_002754524.1 identified by match to protein family HMM PF00253 YP_002754525.1 identified by match to protein family HMM PF00281; match to protein family HMM PF00673 YP_002754526.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel YP_002754527.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase YP_002754528.1 primary binding protein; helps mediate assembly; involved in translation fidelity YP_002754529.1 identified by match to protein family HMM PF00831; match to protein family HMM TIGR00012 YP_002754530.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e YP_002754531.1 identified by match to protein family HMM PF00189; match to protein family HMM PF00417; match to protein family HMM PF07650; match to protein family HMM TIGR01009 YP_002754532.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center YP_002754533.1 identified by match to protein family HMM PF00203; match to protein family HMM TIGR01050 YP_002754534.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation YP_002754535.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel YP_002754536.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA YP_002754537.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin YP_002754538.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex YP_002754539.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu YP_002754540.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene YP_002754541.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit YP_002754542.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance YP_002754543.1 identified by match to protein family HMM PF00583 YP_002754544.1 identified by match to protein family HMM PF00326; match to protein family HMM PF02129 YP_002754546.1 identified by glimmer; putative YP_002754547.1 identified by match to protein family HMM PF03477; match to protein family HMM TIGR00244 YP_002754548.1 identified by match to protein family HMM PF00180 YP_002754549.1 catalyzes the formation of aspartate semialdehyde from aspartyl phosphate YP_002754550.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; functions in amino acid biosynthesis; lysine sensitive YP_002754551.1 identified by similarity to SP:P04036; match to protein family HMM PF01113; match to protein family HMM PF05173; match to protein family HMM TIGR00036 YP_002754552.1 identified by match to protein family HMM PF00535 YP_002754553.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis YP_002754554.1 catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway YP_002754555.1 identified by match to protein family HMM PF00753; match to protein family HMM PF07521 YP_002754556.1 identified by similarity to SP:P05792; match to protein family HMM PF00291 YP_002754557.1 identified by glimmer; putative YP_002754558.1 identified by match to protein family HMM PF01580 YP_002754560.1 identified by match to protein family HMM PF00072; match to protein family HMM PF01627 YP_002754561.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00196 YP_002754562.1 identified by match to protein family HMM PF00691 YP_002754563.1 identified by match to protein family HMM PF03446 YP_002754564.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF08659 YP_002754565.1 identified by match to protein family HMM PF00107; match to protein family HMM PF08240 YP_002754566.1 identified by glimmer; putative YP_002754567.1 identified by glimmer; putative YP_002754568.1 identified by match to protein family HMM PF00005 YP_002754569.1 identified by match to protein family HMM PF01061 YP_002754571.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF08448; match to protein family HMM TIGR00229 YP_002754572.1 identified by match to protein family HMM PF03486; match to protein family HMM PF07992 YP_002754573.1 catalyzes the formation of fumarate from aspartate YP_002754574.1 identified by glimmer; putative YP_002754575.1 identified by glimmer; putative YP_002754576.1 identified by similarity to SP:Q04973; match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993 YP_002754577.1 identified by match to protein family HMM PF00984; match to protein family HMM PF03446; match to protein family HMM PF03720; match to protein family HMM PF03721; match to protein family HMM TIGR03026 YP_002754578.1 identified by match to protein family HMM PF01648 YP_002754579.1 identified by glimmer; putative YP_002754580.1 identified by similarity to GB:CAD74764.1 YP_002754581.1 identified by glimmer; putative YP_002754582.1 identified by glimmer; putative YP_002754583.1 identified by match to protein family HMM PF00310; match to protein family HMM PF01380; match to protein family HMM TIGR01135 YP_002754584.1 identified by match to protein family HMM PF02700; match to protein family HMM TIGR00302 YP_002754585.1 identified by match to protein family HMM PF00719 YP_002754586.1 identified by match to protein family HMM PF00324 YP_002754587.1 identified by similarity to SP:P94177; match to protein family HMM PF00873; match to protein family HMM TIGR00914 YP_002754588.1 identified by similarity to SP:P13510; match to protein family HMM PF00529; match to protein family HMM TIGR01730 YP_002754589.1 identified by match to protein family HMM PF02321 YP_002754590.1 identified by glimmer; putative YP_002754591.1 identified by glimmer; putative YP_002754592.1 identified by match to protein family HMM PF00515; match to protein family HMM PF07719 YP_002754593.1 identified by match to protein family HMM PF01839; match to protein family HMM PF07593 YP_002754594.1 identified by match to protein family HMM PF00122; match to protein family HMM PF00689; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM TIGR01494 YP_002754595.1 identified by match to protein family HMM PF01594 YP_002754596.1 identified by similarity to SP:P24931; match to protein family HMM PF02915 YP_002754597.1 identified by match to protein family HMM PF02592; match to protein family HMM TIGR00697 YP_002754598.1 identified by similarity to GB:CAI06201.1; match to protein family HMM PF02586 YP_002754599.1 identified by glimmer; putative YP_002754600.1 identified by similarity to GB:AAS06037.1 YP_002754601.1 identified by similarity to SP:O34623; match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594 YP_002754602.1 identified by similarity to GB:CAH39297.1 YP_002754603.1 identified by glimmer; putative YP_002754604.1 identified by match to protein family HMM PF02687; match to protein family HMM TIGR03434 YP_002754605.1 identified by match to protein family HMM PF03551; match to protein family HMM TIGR03433 YP_002754606.1 identified by similarity to PIR:S76628; match to protein family HMM PF05685 YP_002754607.1 identified by match to protein family HMM PF03551; match to protein family HMM TIGR03433 YP_002754608.1 identified by match to protein family HMM PF02687; match to protein family HMM TIGR03434 YP_002754609.1 identified by match to protein family HMM PF02687 YP_002754610.1 identified by match to protein family HMM PF02687; match to protein family HMM TIGR03434 YP_002754611.1 identified by match to protein family HMM PF03551; match to protein family HMM TIGR03433 YP_002754612.1 identified by glimmer; putative YP_002754613.1 conserved hypothetical protein, authentic point mutation; this gene contains a premature stop which is not the result of sequencing error YP_002754614.1 identified by similarity to GB:CAD31502.1 YP_002754615.1 identified by similarity to GB:CAE20477.1 YP_002754616.1 identified by similarity to GB:CAI07521.1 YP_002754617.1 identified by match to protein family HMM PF02384 YP_002754618.1 identified by match to protein family HMM PF01420 YP_002754619.1 identified by match to protein family HMM PF04313; match to protein family HMM PF04851; match to protein family HMM TIGR00348 YP_002754620.1 identified by glimmer; putative YP_002754621.1 identified by similarity to GB:BAC59348.1; match to protein family HMM PF00899 YP_002754622.1 identified by similarity to GB:BAC59347.1 YP_002754623.1 identified by similarity to GB:BAC53569.1 YP_002754624.1 identified by similarity to GB:CAD86450.1; match to protein family HMM PF06114 YP_002754625.1 identified by glimmer; putative YP_002754626.1 identified by match to protein family HMM PF07804; match to protein family HMM PF07805 YP_002754627.1 identified by match to protein family HMM PF01381 YP_002754628.1 identified by match to protein family HMM PF01527 YP_002754629.1 identified by glimmer; putative YP_002754630.1 identified by match to protein family HMM PF03551 YP_002754631.1 identified by match to protein family HMM PF00005 YP_002754633.1 identified by glimmer; putative YP_002754634.1 identified by match to protein family HMM PF00589 YP_002754635.1 identified by glimmer; putative YP_002754636.1 identified by glimmer; putative YP_002754637.1 identified by glimmer; putative YP_002754638.1 identified by similarity to GB:BAC89307.1; match to protein family HMM PF05685 YP_002754639.1 identified by match to protein family HMM PF07693 YP_002754640.1 identified by match to protein family HMM TIGR02293 YP_002754641.1 identified by similarity to SP:P94177; match to protein family HMM PF00873; match to protein family HMM TIGR00914 YP_002754642.1 identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730 YP_002754643.1 identified by match to protein family HMM PF02321 YP_002754644.1 identified by match to protein family HMM PF02518 YP_002754645.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00196 YP_002754646.1 identified by match to protein family HMM PF02687; match to protein family HMM TIGR03434 YP_002754647.1 identified by match to protein family HMM PF03551; match to protein family HMM TIGR03433 YP_002754648.1 identified by match to protein family HMM PF02661 YP_002754649.1 The stop site for this ORF lies outside the terminus of the IS element.; identified by match to protein family HMM PF00665 YP_002754650.1 identified by match to protein family HMM PF01527 YP_002754651.1 identified by similarity to GB:BAC71251.1 YP_002754652.1 identified by glimmer; putative YP_002754653.1 identified by match to protein family HMM PF01833 YP_002754654.1 identified by glimmer; putative YP_002754655.1 identified by match to protein family HMM PF00582 YP_002754656.1 identified by glimmer; putative YP_002754657.1 identified by match to protein family HMM PF01229 YP_002754658.1 identified by match to protein family HMM PF00328 YP_002754659.1 identified by glimmer; putative YP_002754660.1 identified by match to protein family HMM TIGR01409 YP_002754661.1 identified by similarity to GB:CAH37553.1 YP_002754662.1 identified by match to protein family HMM PF02065 YP_002754663.1 identified by glimmer; putative YP_002754664.1 identified by match to protein family HMM PF02578; match to protein family HMM TIGR00726 YP_002754665.1 catalyzes the reduction of ribonucleotides to deoxyribonucleotides; the rate-limiting step in dNTP synthesis YP_002754666.1 identified by glimmer; putative YP_002754667.1 identified by glimmer; putative YP_002754668.1 identified by match to protein family HMM PF01638 YP_002754669.1 identified by glimmer; putative YP_002754670.1 identified by match to protein family HMM PF00106; match to protein family HMM PF08659 YP_002754671.1 identified by glimmer; putative YP_002754672.1 identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721 YP_002754673.1 identified by similarity to GB:BAB49834.1 YP_002754674.1 identified by match to protein family HMM PF05738 YP_002754675.1 identified by glimmer; putative YP_002754676.1 identified by glimmer; putative YP_002754677.1 identified by glimmer; putative YP_002754678.1 identified by similarity to SP:P75830; match to protein family HMM TIGR01730 YP_002754679.1 identified by match to protein family HMM PF02687 YP_002754680.1 identified by match to protein family HMM PF00005 YP_002754681.1 identified by glimmer; putative YP_002754682.1 identified by glimmer; putative YP_002754683.1 identified by similarity to GB:AAR34003.1 YP_002754685.1 identified by match to protein family HMM PF01075; match to protein family HMM TIGR02193 YP_002754686.1 identified by match to protein family HMM PF02606; match to protein family HMM TIGR00682 YP_002754687.1 identified by similarity to GB:CAD12639.1; match to protein family HMM PF04413 YP_002754688.1 identified by glimmer; putative YP_002754689.1 identified by similarity to SP:O54055; match to protein family HMM PF00266; match to protein family HMM PF01212 YP_002754690.1 identified by match to protein family HMM PF00595; match to protein family HMM PF02163; match to protein family HMM TIGR00054 YP_002754691.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate YP_002754692.1 identified by match to protein family HMM PF01148 YP_002754693.1 identified by glimmer; putative YP_002754694.1 identified by match to protein family HMM PF00749; match to protein family HMM TIGR00464 YP_002754695.1 identified by match to protein family HMM PF02542; match to protein family HMM TIGR00151 YP_002754696.1 identified by match to protein family HMM PF01128; match to protein family HMM TIGR00453 YP_002754697.1 identified by glimmer; putative YP_002754698.1 identified by glimmer; putative YP_002754699.1 identified by similarity to GB:BAD41574.1 YP_002754700.1 identified by match to protein family HMM PF03807 YP_002754701.1 identified by match to protein family HMM PF00293 YP_002754702.1 identified by similarity to SP:P51777; match to protein family HMM PF00313 YP_002754703.1 identified by match to protein family HMM PF00633; match to protein family HMM PF02811 YP_002754704.1 identified by match to protein family HMM TIGR01409 YP_002754705.1 identified by similarity to GB:AAQ58586.1 YP_002754706.1 identified by match to protein family HMM PF01255; match to protein family HMM TIGR00055 YP_002754707.1 identified by similarity to SP:P08821; match to protein family HMM PF00216 YP_002754708.1 identified by match to protein family HMM PF00535 YP_002754709.1 identified by glimmer; putative YP_002754710.1 identified by match to protein family HMM PF00005 YP_002754711.1 identified by glimmer; putative YP_002754712.1 identified by similarity to SP:Q06903; match to protein family HMM PF00326; match to protein family HMM PF02897 YP_002754713.1 identified by glimmer; putative YP_002754714.1 identified by glimmer; putative YP_002754715.1 identified by match to protein family HMM PF02321 YP_002754716.1 identified by match to protein family HMM PF00512; match to protein family HMM PF02518 YP_002754717.1 identified by similarity to SP:Q9P999; match to protein family HMM PF01055 YP_002754718.1 identified by similarity to PIR:C81975; match to protein family HMM PF06296 YP_002754719.1 identified by match to protein family HMM PF01381 YP_002754720.1 identified by match to protein family HMM PF04055; match to protein family HMM TIGR00423; match to protein family HMM TIGR03699 YP_002754721.1 identified by glimmer; putative YP_002754722.1 identified by glimmer; putative YP_002754723.1 identified by glimmer; putative YP_002754724.1 identified by match to protein family HMM PF00535 YP_002754725.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs YP_002754726.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains YP_002754727.1 identified by match to protein family HMM PF01402 YP_002754728.1 identified by match to protein family HMM PF01850 YP_002754730.1 identified by match to protein family HMM PF01979; match to protein family HMM PF07969 YP_002754731.1 identified by glimmer; putative YP_002754732.1 identified by similarity to GB:BAC91407.1; match to protein family HMM PF07366 YP_002754733.1 identified by glimmer; putative YP_002754734.1 identified by similarity to GB:BAA82613.1; match to protein family HMM PF00348 YP_002754735.1 identified by match to protein family HMM PF01804 YP_002754736.1 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549 YP_002754737.1 identified by glimmer; putative YP_002754738.1 identified by match to protein family HMM PF00378 YP_002754739.1 identified by match to protein family HMM PF00682 YP_002754740.1 identified by glimmer; putative YP_002754741.1 identified by match to protein family HMM PF01039 YP_002754742.1 identified by match to protein family HMM PF00561 YP_002754743.1 identified by glimmer; putative YP_002754744.1 identified by match to protein family HMM PF01022 YP_002754745.1 identified by similarity to GB:AAS69285.1; match to protein family HMM PF08327 YP_002754746.1 identified by glimmer; putative YP_002754747.1 identified by match to protein family HMM PF01381 YP_002754749.1 identified by glimmer; putative YP_002754750.1 identified by match to protein family HMM TIGR00757 YP_002754751.1 identified by match to protein family HMM PF01098; match to protein family HMM TIGR02210 YP_002754753.1 identified by match to protein family HMM PF00571; match to protein family HMM PF01380; match to protein family HMM TIGR00393 YP_002754754.1 identified by similarity to GB:BAC06880.1 YP_002754755.1 identified by similarity to SP:P35160; match to protein family HMM PF00578; match to protein family HMM PF08534 YP_002754756.1 identified by glimmer; putative YP_002754757.1 identified by similarity to GB:BAB49186.1; match to protein family HMM PF00196 YP_002754758.1 identified by glimmer; putative YP_002754759.1 identified by glimmer; putative YP_002754760.1 identified by glimmer; putative YP_002754761.1 identified by match to protein family HMM PF00905; match to protein family HMM PF03717; match to protein family HMM TIGR03423 YP_002754762.1 identified by match to protein family HMM TIGR03426 YP_002754763.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall YP_002754764.1 functions in MreBCD complex in some organisms YP_002754765.1 identified by match to protein family HMM PF00171 YP_002754766.1 identified by match to protein family HMM PF01757 YP_002754767.1 identified by match to protein family HMM PF01262; match to protein family HMM PF05222; match to protein family HMM TIGR00518 YP_002754768.1 identified by glimmer; putative YP_002754769.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229 YP_002754770.1 identified by similarity to SP:Q06065; match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954 YP_002754771.1 identified by match to protein family HMM PF05063 YP_002754772.1 identified by glimmer; putative YP_002754773.1 identified by match to protein family HMM PF00665 YP_002754774.1 identified by similarity to SP:P42182; match to protein family HMM PF01926; match to protein family HMM PF07650; match to protein family HMM TIGR00231; match to protein family HMM TIGR00436; match to protein family HMM TIGR00650 YP_002754775.1 identified by match to protein family HMM PF00571; match to protein family HMM PF03471 YP_002754776.1 identified by match to protein family HMM PF02130; match to protein family HMM TIGR00043 YP_002754777.1 identified by match to protein family HMM PF02562 YP_002754778.1 identified by match to protein family HMM PF02687; match to protein family HMM TIGR03434 YP_002754779.1 identified by match to protein family HMM PF03551; match to protein family HMM TIGR03433 YP_002754780.1 identified by glimmer; putative YP_002754781.1 identified by match to protein family HMM PF00924 YP_002754782.1 identified by match to protein family HMM PF00199 YP_002754783.1 identified by match to protein family HMM PF07885 YP_002754784.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase YP_002754785.1 identified by glimmer; putative YP_002754786.1 identified by similarity to GB:CAE55461.1 YP_002754787.1 identified by similarity to PIR:AC1888 YP_002754788.1 identified by match to protein family HMM PF03061 YP_002754789.1 identified by similarity to GB:CAD73037.1 YP_002754790.1 identified by match to protein family HMM PF02190 YP_002754792.1 identified by similarity to PIR:H75280 YP_002754793.1 identified by similarity to SP:P50465; match to protein family HMM PF01149; match to protein family HMM PF06831 YP_002754794.1 identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF08494 YP_002754795.1 identified by similarity to SP:P19079; match to protein family HMM PF00383; match to protein family HMM TIGR01354 YP_002754796.1 identified by similarity to SP:P39142; match to protein family HMM PF00591; match to protein family HMM PF02885; match to protein family HMM PF07831; match to protein family HMM TIGR02644 YP_002754797.1 identified by match to protein family HMM PF01773; match to protein family HMM PF07662; match to protein family HMM PF07670 YP_002754798.1 identified by similarity to SP:P46354; match to protein family HMM PF00896; match to protein family HMM TIGR01697; match to protein family HMM TIGR01700 YP_002754799.1 identified by match to protein family HMM PF00485; match to protein family HMM TIGR00235 YP_002754800.1 identified by glimmer; putative YP_002754801.1 identified by glimmer; putative YP_002754802.1 identified by match to protein family HMM PF00535 YP_002754803.1 identified by match to protein family HMM PF07681 YP_002754804.1 identified by match to protein family HMM PF00106; match to protein family HMM PF08659 YP_002754805.1 identified by similarity to GB:AAK23109.1 YP_002754806.1 transforms a conserved lysine residue of initiation factor 5A into deoxyhypusine YP_002754807.1 identified by glimmer; putative YP_002754808.1 identified by match to protein family HMM PF00072 YP_002754809.1 identified by match to protein family HMM PF07885 YP_002754810.1 identified by similarity to PIR:C72337 YP_002754811.1 identified by similarity to SP:P04994; match to protein family HMM PF01336; match to protein family HMM PF02601; match to protein family HMM TIGR00237 YP_002754812.1 identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880; match to protein family HMM TIGR01455 YP_002754813.1 identified by similarity to SP:P00582; match to protein family HMM PF00476; match to protein family HMM PF01367; match to protein family HMM PF01612; match to protein family HMM PF02739; match to protein family HMM TIGR00593 YP_002754814.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step YP_002754815.1 identified by similarity to GB:AAS70951.1; match to protein family HMM PF04028 YP_002754816.1 identified by similarity to GB:AAC62424.1 YP_002754817.1 identified by match to protein family HMM PF00005 YP_002754818.1 catalyzes branch migration in Holliday junction intermediates YP_002754819.1 PvlArgDC; converts arginine to agmatine and carbon dioxide; has a role in polyamine metabolism; in Methanococcus jannaschii this enzyme self-cleaves at serine-serine bond to form alpha (N-terminal) and beta (C-terminal) subunits; the alpha subunit contains a catalytically active pyruvoyl group; the beta subunit contains the substrate-binding residues; forms homotrimers of the alpha/beta complex YP_002754820.1 identified by match to protein family HMM PF00795 YP_002754821.1 identified by match to protein family HMM PF04371 YP_002754822.1 identified by similarity to GB:AAS11056.1 YP_002754823.1 identified by match to protein family HMM PF00383 YP_002754824.1 identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM PF08282; match to protein family HMM TIGR01484 YP_002754825.1 identified by match to protein family HMM PF01464 YP_002754826.1 identified by glimmer; putative YP_002754828.1 identified by glimmer; putative YP_002754829.1 identified by glimmer; putative YP_002754830.1 identified by similarity to GB:CAG37536.1; match to protein family HMM PF02021 YP_002754831.1 identified by glimmer; putative YP_002754832.1 identified by match to protein family HMM PF01839 YP_002754833.1 identified by match to protein family HMM PF00515; match to protein family HMM PF07719 YP_002754834.1 identified by similarity to PIR:G82732 YP_002754835.1 identified by glimmer; putative YP_002754836.1 identified by glimmer; putative YP_002754838.1 identified by match to protein family HMM PF00107; match to protein family HMM PF08240 YP_002754839.1 identified by match to protein family HMM PF01988; match to protein family HMM PF02915 YP_002754840.1 identified by match to protein family HMM PF01210; match to protein family HMM PF02153 YP_002754841.1 identified by match to protein family HMM PF00793; match to protein family HMM TIGR01361 YP_002754842.1 identified by match to protein family HMM PF01817 YP_002754843.1 identified by match to protein family HMM PF00290; match to protein family HMM TIGR00262 YP_002754844.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate YP_002754845.1 identified by match to protein family HMM PF00697 YP_002754846.1 identified by match to protein family HMM PF00218 YP_002754847.1 identified by glimmer; putative YP_002754848.1 identified by glimmer; putative YP_002754849.1 identified by glimmer; putative YP_002754850.1 identified by similarity to SP:P39435; match to protein family HMM PF00109; match to protein family HMM PF02801; match to protein family HMM TIGR03150 YP_002754851.1 carries the fatty acid chain in fatty acid biosynthesis YP_002754852.1 identified by match to protein family HMM PF02646 YP_002754853.1 identified by glimmer; putative YP_002754854.1 identified by match to protein family HMM PF01230 YP_002754855.1 identified by similarity to GB:CAI08735.1 YP_002754856.1 identified by match to protein family HMM PF01522 YP_002754857.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase YP_002754858.1 identified by glimmer; putative YP_002754859.1 identified by match to protein family HMM PF00512; match to protein family HMM PF02518 YP_002754860.1 identified by similarity to SP:P33596; match to protein family HMM PF02631 YP_002754861.1 identified by glimmer; putative YP_002754862.1 identified by similarity to SP:O31616; match to protein family HMM PF01266; match to protein family HMM PF07992 YP_002754863.1 identified by match to protein family HMM PF00285; match to protein family HMM TIGR01800 YP_002754864.1 identified by glimmer; putative YP_002754865.1 identified by glimmer; putative YP_002754866.1 identified by match to protein family HMM PF00106 YP_002754867.1 identified by match to protein family HMM PF00580 YP_002754868.1 identified by glimmer; putative YP_002754869.1 identified by match to protein family HMM PF00324 YP_002754870.1 identified by similarity to GB:AAR33800.1 YP_002754871.1 identified by similarity to PIR:E83395; match to protein family HMM PF04237 YP_002754872.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993 YP_002754874.1 required for 70S ribosome assembly YP_002754875.1 identified by glimmer; putative YP_002754876.1 identified by match to protein family HMM PF01925 YP_002754877.1 identified by similarity to SP:O06737; match to protein family HMM PF01507; match to protein family HMM TIGR00434 YP_002754878.1 identified by match to protein family HMM PF00009; match to protein family HMM PF03144; match to protein family HMM TIGR02034 YP_002754879.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP YP_002754880.1 identified by match to protein family HMM PF01641; match to protein family HMM TIGR00357 YP_002754881.1 identified by match to protein family HMM PF01042; match to protein family HMM TIGR00004 YP_002754882.1 identified by glimmer; putative YP_002754883.1 identified by match to protein family HMM PF00533; match to protein family HMM PF00633; match to protein family HMM PF01653; match to protein family HMM PF03119; match to protein family HMM PF03120; match to protein family HMM TIGR00575 YP_002754884.1 identified by match to protein family HMM PF00082; match to protein family HMM PF09286 YP_002754885.1 identified by similarity to PIR:T43828; match to protein family HMM PF01039 YP_002754886.1 identified by glimmer; putative YP_002754887.1 identified by match to protein family HMM PF00817 YP_002754888.1 identified by match to protein family HMM PF05532 YP_002754889.1 identified by similarity to SP:P22250; match to protein family HMM PF00749 YP_002754890.1 identified by similarity to SP:P44031; match to protein family HMM PF05973 YP_002754891.1 identified by similarity to GB:AAO54026.1 YP_002754892.1 identified by match to protein family HMM PF01751; match to protein family HMM PF01807; match to protein family HMM PF08275; match to protein family HMM TIGR01391 YP_002754893.1 identified by similarity to SP:P06567 YP_002754894.1 identified by match to protein family HMM PF00310; match to protein family HMM PF00733; match to protein family HMM TIGR01536 YP_002754895.1 identified by glimmer; putative YP_002754896.1 identified by match to protein family HMM PF05163 YP_002754897.1 identified by match to protein family HMM PF01694 YP_002754898.1 identified by match to protein family HMM PF01546; match to protein family HMM PF04389 YP_002754899.1 identified by glimmer; putative YP_002754900.1 identified by glimmer; putative YP_002754901.1 identified by match to protein family HMM PF00132 YP_002754902.1 identified by match to protein family HMM PF01409; match to protein family HMM TIGR00468 YP_002754903.1 identified by match to protein family HMM PF05635 YP_002754904.1 identified by match to protein family HMM PF03147; match to protein family HMM PF03483; match to protein family HMM PF03484; match to protein family HMM TIGR00472 YP_002754905.1 identified by glimmer; putative YP_002754906.1 identified by similarity to PIR:C82993; match to protein family HMM PF05164 YP_002754907.1 identified by similarity to GB:AAN54647.1 YP_002754908.1 identified by match to protein family HMM PF01790 YP_002754909.1 identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00005 YP_002754910.1 identified by similarity to SP:O68390; match to protein family HMM PF02566 YP_002754911.1 identified by similarity to GB:CAA05166.1; match to protein family HMM PF00487 YP_002754912.1 identified by match to protein family HMM PF02627; match to protein family HMM TIGR00778 YP_002754913.1 identified by match to protein family HMM PF00890; match to protein family HMM PF01266; match to protein family HMM PF03486; match to protein family HMM PF07992; match to protein family HMM TIGR00275 YP_002754914.1 identified by glimmer; putative YP_002754917.1 identified by match to protein family HMM PF01967; match to protein family HMM TIGR00581 YP_002754918.1 identified by match to protein family HMM PF00994; match to protein family HMM PF03453; match to protein family HMM PF03454; match to protein family HMM TIGR00177 YP_002754919.1 identified by glimmer; putative YP_002754920.1 identified by match to protein family HMM PF06508; match to protein family HMM TIGR00364 YP_002754922.1 identified by similarity to GB:BAC48042.1 YP_002754923.1 identified by match to protein family HMM PF00860; match to protein family HMM PF00916; match to protein family HMM PF01740 YP_002754924.1 TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine YP_002754925.1 identified by match to protein family HMM PF02687 YP_002754926.1 identified by glimmer; putative YP_002754927.1 identified by match to protein family HMM PF02663 YP_002754928.1 identified by match to protein family HMM PF04055 YP_002754929.1 identified by glimmer; putative YP_002754930.1 identified by match to protein family HMM PF00593; match to protein family HMM PF07715 YP_002754931.1 identified by glimmer; putative YP_002754932.1 identified by similarity to GB:CAD16874.1 YP_002754933.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA YP_002754934.1 identified by match to protein family HMM PF02686; match to protein family HMM TIGR00135 YP_002754935.1 identified by similarity to GB:CAE40465.1; match to protein family HMM PF02397 YP_002754936.1 identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR01214 YP_002754937.1 identified by match to protein family HMM PF00908; match to protein family HMM TIGR01221 YP_002754938.1 identified by match to protein family HMM PF00483; match to protein family HMM TIGR01207 YP_002754939.1 identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR01181 YP_002754940.1 identified by match to protein family HMM PF02706 YP_002754941.1 identified by similarity to SP:Q03961; match to protein family HMM PF02563 YP_002754942.1 identified by match to protein family HMM PF02012 YP_002754943.1 identified by glimmer; putative YP_002754944.1 identified by similarity to SP:P12769; match to protein family HMM PF03441 YP_002754945.1 identified by match to protein family HMM PF00171 YP_002754946.1 identified by match to protein family HMM PF00730 YP_002754947.1 identified by match to protein family HMM PF03065 YP_002754948.1 identified by match to protein family HMM PF00355 YP_002754950.1 identified by match to protein family HMM PF03631; match to protein family HMM TIGR00765 YP_002754951.1 identified by match to protein family HMM PF00224; match to protein family HMM PF02887; match to protein family HMM TIGR01064 YP_002754952.1 identified by similarity to SP:P49850; match to protein family HMM PF01119; match to protein family HMM PF02518; match to protein family HMM PF08676; match to protein family HMM TIGR00585 YP_002754953.1 identified by glimmer; putative YP_002754954.1 identified by glimmer; putative YP_002754955.1 identified by glimmer; putative YP_002754956.1 identified by similarity to SP:P38493; match to protein family HMM PF02224; match to protein family HMM TIGR00017 YP_002754957.1 identified by glimmer; putative YP_002754958.1 identified by glimmer; putative YP_002754959.1 identified by glimmer; putative YP_002754960.1 identified by glimmer; putative YP_002754961.1 identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937 YP_002754962.1 catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate YP_002754963.1 identified by glimmer; putative YP_002754964.1 identified by glimmer; putative YP_002754965.1 identified by glimmer; putative YP_002754966.1 identified by similarity to SP:O86028; match to protein family HMM PF01642; match to protein family HMM TIGR00641 YP_002754967.1 identified by similarity to SP:P18773; match to protein family HMM PF07859 YP_002754968.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690 YP_002754969.1 identified by similarity to GB:AAU49520.1 YP_002754970.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis YP_002754971.1 identified by match to protein family HMM PF01546; match to protein family HMM PF07687 YP_002754972.1 identified by glimmer; putative YP_002754973.1 identified by similarity to SP:Q02169; match to protein family HMM PF02545; match to protein family HMM TIGR00172 YP_002754974.1 identified by match to protein family HMM PF01112 YP_002754975.1 identified by match to protein family HMM PF00924 YP_002754976.1 identified by match to protein family HMM PF09335 YP_002754977.1 identified by match to protein family HMM PF00994; match to protein family HMM TIGR00177 YP_002754978.1 identified by glimmer; putative YP_002754979.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity YP_002754981.1 identified by glimmer; putative YP_002754982.1 identified by similarity to GB:CAD65060.1 YP_002754983.1 identified by match to protein family HMM PF00155; match to protein family HMM PF00202; match to protein family HMM PF00266; match to protein family HMM TIGR00858; match to protein family HMM TIGR01825 YP_002754984.1 identified by match to protein family HMM PF01431; match to protein family HMM PF05649 YP_002754985.1 identified by glimmer; putative YP_002754986.1 identified by match to protein family HMM PF00593 YP_002754987.1 identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721 YP_002754988.1 identified by similarity to SP:P71019; match to protein family HMM PF00698; match to protein family HMM TIGR00128 YP_002754989.1 identified by match to protein family HMM PF00903 YP_002754990.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY YP_002754991.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not YP_002754992.1 identified by similarity to PIR:E72412; match to protein family HMM PF02620 YP_002754993.1 identified by similarity to GB:BAA19135.1; match to protein family HMM PF01565 YP_002754994.1 identified by glimmer; putative YP_002754995.1 identified by glimmer; putative YP_002754996.1 identified by match to protein family HMM PF05592 YP_002754997.1 identified by match to protein family HMM PF01425 YP_002754998.1 identified by similarity to SP:P24137; match to protein family HMM PF00005 YP_002754999.1 identified by match to protein family HMM PF01925 YP_002755000.1 identified by similarity to GB:CAE21092.1 YP_002755001.1 identified by similarity to GB:AAS69970.1 YP_002755002.1 identified by match to protein family HMM PF03641; match to protein family HMM TIGR00730 YP_002755004.1 identified by match to protein family HMM PF01261; match to protein family HMM PF07582 YP_002755006.1 identified by match to protein family HMM PF01494 YP_002755007.1 identified by match to protein family HMM PF00440 YP_002755008.1 identified by match to protein family HMM PF00581; match to protein family HMM PF00753 YP_002755009.1 identified by match to protein family HMM PF01638 YP_002755010.1 identified by match to protein family HMM PF05163 YP_002755011.1 identified by match to protein family HMM PF06983 YP_002755012.1 identified by match to protein family HMM PF00903; match to protein family HMM PF06983 YP_002755013.1 identified by match to protein family HMM PF02012 YP_002755014.1 identified by glimmer; putative YP_002755016.1 identified by match to protein family HMM PF00175; match to protein family HMM PF00970 YP_002755017.1 identified by similarity to GB:CAI07107.1; match to protein family HMM PF03781; match to protein family HMM TIGR03440 YP_002755018.1 identified by similarity to GB:AAS02620.1; match to protein family HMM PF08242; match to protein family HMM TIGR03438 YP_002755019.1 NAD(P)H-dependent; catalyzes the reduction of 2,3-diketo-L-gulonate to 3-keto-L-gulonate YP_002755020.1 identified by match to protein family HMM PF01408; match to protein family HMM PF02894 YP_002755021.1 identified by match to protein family HMM PF01381 YP_002755022.1 identified by glimmer; putative YP_002755023.1 identified by match to protein family HMM PF04020 YP_002755024.1 identified by glimmer; putative YP_002755025.1 identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254 YP_002755026.1 identified by match to protein family HMM PF01520 YP_002755027.1 identified by match to protein family HMM PF01411; match to protein family HMM PF02272; match to protein family HMM PF07973; match to protein family HMM TIGR00344 YP_002755028.1 identified by glimmer; putative YP_002755029.1 identified by glimmer; putative YP_002755030.1 identified by match to protein family HMM PF01590; match to protein family HMM PF07228 YP_002755031.1 identified by match to protein family HMM PF00903 YP_002755032.1 identified by similarity to GB:AAA62129.1; match to protein family HMM PF03033 YP_002755033.1 identified by similarity to SP:P22333; match to protein family HMM PF00962 YP_002755034.1 identified by match to protein family HMM PF02055 YP_002755035.1 identified by similarity to SP:P27304; match to protein family HMM PF07690; match to protein family HMM TIGR00711 YP_002755036.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM PF08448; match to protein family HMM TIGR00229 YP_002755037.1 identified by similarity to GB:CAH13054.1; match to protein family HMM PF04362 YP_002755038.1 identified by match to protein family HMM PF01522 YP_002755039.1 identified by match to protein family HMM PF00089 YP_002755040.1 identified by match to protein family HMM PF01121; match to protein family HMM TIGR00152 YP_002755041.1 identified by similarity to GB:BAC72761.1; match to protein family HMM PF03966 YP_002755042.1 identified by glimmer; putative YP_002755043.1 identified by match to protein family HMM PF01965; match to protein family HMM TIGR01382 YP_002755044.1 identified by match to protein family HMM PF01078; match to protein family HMM PF07728; match to protein family HMM TIGR00368 YP_002755045.1 identified by glimmer; putative YP_002755046.1 identified by match to protein family HMM PF00593; match to protein family HMM PF07715; match to protein family HMM TIGR01782 YP_002755047.1 identified by glimmer; putative YP_002755048.1 identified by match to protein family HMM TIGR01730 YP_002755049.1 identified by match to protein family HMM PF00873 YP_002755050.1 identified by similarity to SP:P11092 YP_002755051.1 identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937 YP_002755052.1 identified by glimmer; putative YP_002755053.1 identified by glimmer; putative YP_002755054.1 identified by glimmer; putative YP_002755055.1 identified by match to protein family HMM PF00488 YP_002755056.1 identified by glimmer; putative YP_002755057.1 identified by match to protein family HMM PF06144; match to protein family HMM TIGR01128 YP_002755058.1 identified by glimmer; putative YP_002755059.1 identified by glimmer; putative YP_002755060.1 identified by match to protein family HMM PF00892 YP_002755061.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine YP_002755062.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate YP_002755063.1 identified by glimmer; putative YP_002755064.1 identified by similarity to GB:CAH34282.1; match to protein family HMM TIGR03472 YP_002755065.1 identified by match to protein family HMM PF02687 YP_002755066.1 identified by match to protein family HMM PF02687 YP_002755067.1 identified by glimmer; putative YP_002755068.1 identified by glimmer; putative YP_002755069.1 identified by glimmer; putative YP_002755070.1 identified by match to protein family HMM PF00156 YP_002755071.1 identified by match to protein family HMM PF00185; match to protein family HMM PF02729; match to protein family HMM TIGR00670 YP_002755072.1 identified by match to protein family HMM PF01979; match to protein family HMM PF07969; match to protein family HMM TIGR00857 YP_002755073.1 identified by match to protein family HMM PF00575; match to protein family HMM PF00773; match to protein family HMM PF08206; match to protein family HMM TIGR00358; match to protein family HMM TIGR02063 YP_002755074.1 identified by match to protein family HMM PF04519 YP_002755075.1 identified by match to protein family HMM PF00724 YP_002755076.1 identified by match to protein family HMM PF00376 YP_002755077.1 identified by glimmer; putative YP_002755078.1 identified by match to protein family HMM PF00633; match to protein family HMM PF00730 YP_002755079.1 identified by match to protein family HMM PF00962; match to protein family HMM TIGR01430 YP_002755080.1 identified by glimmer; putative YP_002755081.1 identified by similarity to SP:P37032; match to protein family HMM PF00330; match to protein family HMM PF00694; match to protein family HMM TIGR01341 YP_002755082.1 identified by match to protein family HMM PF03070; match to protein family HMM TIGR02111 YP_002755083.1 identified by match to protein family HMM PF01071; match to protein family HMM PF02655; match to protein family HMM PF02843; match to protein family HMM PF02844; match to protein family HMM TIGR00877 YP_002755084.1 identified by match to protein family HMM PF05163 YP_002755086.1 identified by match to protein family HMM TIGR02453 YP_002755087.1 identified by glimmer; putative YP_002755088.1 identified by similarity to SP:P08821; match to protein family HMM PF00216 YP_002755089.1 identified by glimmer; putative YP_002755090.1 identified by glimmer; putative YP_002755092.1 identified by glimmer; putative YP_002755093.1 identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF08494 YP_002755094.1 identified by similarity to SP:P28691; match to protein family HMM PF00004; match to protein family HMM PF01434; match to protein family HMM PF06480; match to protein family HMM PF07728; match to protein family HMM TIGR01241 YP_002755095.1 identified by match to protein family HMM PF00035; match to protein family HMM PF00636; match to protein family HMM TIGR02191 YP_002755096.1 identified by similarity to SP:P00803; match to protein family HMM PF00717; match to protein family HMM TIGR02227 YP_002755097.1 identified by similarity to SP:P00803; match to protein family HMM PF00717; match to protein family HMM TIGR02227 YP_002755098.1 identified by similarity to PIR:H97758; match to protein family HMM PF05170 YP_002755099.1 identified by glimmer; putative YP_002755100.1 identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186 YP_002755101.1 identified by match to protein family HMM PF00593; match to protein family HMM PF07715 YP_002755102.1 identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937 YP_002755103.1 identified by glimmer; putative YP_002755104.1 identified by similarity to GB:AAM32625.1 YP_002755105.1 identified by match to protein family HMM PF00072; match to protein family HMM PF04397 YP_002755106.1 identified by similarity to GB:AAQ66653.1 YP_002755107.1 identified by glimmer; putative YP_002755108.1 identified by glimmer; putative YP_002755109.1 identified by glimmer; putative YP_002755110.1 plays an essential role in ATP-dependent branch migration of the Holliday junction YP_002755111.1 identified by glimmer; putative YP_002755112.1 identified by similarity to GB:AAO90486.1 YP_002755113.1 identified by match to protein family HMM PF01844 YP_002755115.1 identified by similarity to GB:BAB53534.1; match to protein family HMM PF06935 YP_002755116.1 identified by glimmer; putative YP_002755117.1 identified by match to protein family HMM PF03169; match to protein family HMM TIGR00728; match to protein family HMM TIGR00733 YP_002755118.1 identified by similarity to GB:AAB82564.1; match to protein family HMM PF00296 YP_002755119.1 identified by similarity to GB:BAC92199.1 YP_002755120.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk YP_002755121.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit YP_002755122.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21 YP_002755123.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation YP_002755124.1 identified by match to protein family HMM PF01386; match to protein family HMM TIGR00731 YP_002755125.1 identified by match to protein family HMM PF00156; match to protein family HMM TIGR01251 YP_002755126.1 identified by match to protein family HMM PF00288; match to protein family HMM PF08544; match to protein family HMM TIGR00154 YP_002755127.1 identified by similarity to GB:BAC68826.1 YP_002755128.1 identified by match to protein family HMM PF03023 YP_002755129.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway YP_002755130.1 identified by match to protein family HMM PF01230 YP_002755131.1 identified by glimmer; putative YP_002755132.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1 YP_002755133.1 identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF02559; match to protein family HMM PF03461; match to protein family HMM TIGR00580 YP_002755134.1 identified by similarity to SP:Q05852; match to protein family HMM PF00483; match to protein family HMM TIGR01099 YP_002755135.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration YP_002755136.1 identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229 YP_002755138.1 identified by match to protein family HMM PF02661 YP_002755139.1 identified by match to protein family HMM PF00521; match to protein family HMM PF03989; match to protein family HMM TIGR01063 YP_002755140.1 identified by similarity to GB:BAB80641.1; match to protein family HMM PF03928 YP_002755141.1 identified by match to protein family HMM PF01628; match to protein family HMM TIGR00331 YP_002755142.1 identified by similarity to SP:P15874; match to protein family HMM PF01025 YP_002755143.1 identified by similarity to SP:P08622; match to protein family HMM PF00226; match to protein family HMM PF00684; match to protein family HMM PF01556; match to protein family HMM TIGR02349 YP_002755144.1 identified by glimmer; putative YP_002755145.1 identified by match to protein family HMM PF00107; match to protein family HMM PF08240 YP_002755146.1 identified by match to protein family HMM PF00174; match to protein family HMM TIGR01409 YP_002755147.1 identified by similarity to GB:AAN33231.1 YP_002755148.1 identified by match to protein family HMM PF02416; match to protein family HMM TIGR01411 YP_002755149.1 identified by similarity to GB:CAE31348.1 YP_002755150.1 identified by glimmer; putative YP_002755151.1 catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein YP_002755152.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor YP_002755153.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 2 to form the P protein YP_002755154.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein YP_002755155.1 identified by glimmer; putative YP_002755156.1 identified by glimmer; putative YP_002755157.1 identified by glimmer; putative YP_002755158.1 identified by glimmer; putative YP_002755160.1 identified by glimmer; putative YP_002755161.1 identified by similarity to SP:P27034; match to protein family HMM PF00933; match to protein family HMM PF01915 YP_002755163.1 identified by match to protein family HMM PF00268 YP_002755164.1 identified by match to protein family HMM PF00317; match to protein family HMM PF02867; match to protein family HMM PF03477; match to protein family HMM TIGR02506 YP_002755165.1 identified by match to protein family HMM PF02518; match to protein family HMM PF07494; match to protein family HMM PF07495; match to protein family HMM PF07730 YP_002755166.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00196; match to protein family HMM PF08281 YP_002755167.1 identified by glimmer; putative YP_002755168.1 identified by match to protein family HMM PF01987 YP_002755170.1 identified by glimmer; putative YP_002755171.1 identified by similarity to SP:P25714; match to protein family HMM PF02096; match to protein family HMM TIGR03592; match to protein family HMM TIGR03593 YP_002755172.1 identified by similarity to SP:Q9L7M0; match to protein family HMM PF01809 YP_002755173.1 identified by match to protein family HMM PF00825; match to protein family HMM TIGR00188 YP_002755174.1 identified by match to protein family HMM PF00468; match to protein family HMM TIGR01030 YP_002755175.1 identified by glimmer; putative YP_002755176.1 identified by match to protein family HMM PF00308; match to protein family HMM PF08299; match to protein family HMM TIGR00362 YP_002755177.1 identified by match to protein family HMM PF01757 YP_002755178.1 identified by similarity to SP:P75831; match to protein family HMM PF02687; match to protein family HMM TIGR03434 YP_002755179.1 identified by match to protein family HMM PF03551; match to protein family HMM TIGR03433 YP_002755180.1 identified by match to protein family HMM PF06271 YP_002755181.1 identified by glimmer; putative YP_002755182.1 identified by glimmer; putative YP_002755184.1 identified by similarity to SP:P21202; match to protein family HMM PF00639; match to protein family HMM PF09312 YP_002755185.1 identified by match to protein family HMM PF01408; match to protein family HMM PF02894 YP_002755186.1 identified by match to protein family HMM PF00364 YP_002755187.1 identified by match to protein family HMM PF00289; match to protein family HMM PF02222; match to protein family HMM PF02785; match to protein family HMM PF02786; match to protein family HMM TIGR00514 YP_002755188.1 identified by match to protein family HMM PF00515; match to protein family HMM PF07719 YP_002755189.1 identified by match to protein family HMM PF02472 YP_002755190.1 identified by similarity to SP:Q05606; match to protein family HMM PF02472 YP_002755191.1 identified by match to protein family HMM PF01618 YP_002755192.1 identified by match to protein family HMM PF03544; match to protein family HMM TIGR01352 YP_002755193.1 identified by match to protein family HMM PF02355; match to protein family HMM TIGR00916; match to protein family HMM TIGR00966 YP_002755194.1 identified by match to protein family HMM PF02355; match to protein family HMM PF07549; match to protein family HMM TIGR00916; match to protein family HMM TIGR01129 YP_002755195.1 identified by match to protein family HMM PF02699; match to protein family HMM TIGR00739 YP_002755196.1 identified by glimmer; putative YP_002755198.1 identified by match to protein family HMM PF00578; match to protein family HMM PF08534 YP_002755199.1 identified by glimmer; putative YP_002755200.1 identified by similarity to GB:AAV46321.1; match to protein family HMM PF08495 YP_002755201.1 identified by similarity to GB:BAC09164.1; match to protein family HMM PF08447 YP_002755203.1 identified by glimmer; putative YP_002755204.1 identified by match to protein family HMM PF00593; match to protein family HMM PF05738 YP_002755205.1 identified by glimmer; putative YP_002755207.1 identified by match to protein family HMM PF01702; match to protein family HMM TIGR00430; match to protein family HMM TIGR00449 YP_002755208.1 identified by match to protein family HMM PF05738 YP_002755209.1 identified by glimmer; putative YP_002755210.1 identified by glimmer; putative YP_002755211.1 identified by glimmer; putative YP_002755212.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication YP_002755213.1 identified by match to protein family HMM PF00842; match to protein family HMM PF01168; match to protein family HMM TIGR00492 YP_002755214.1 identified by match to protein family HMM PF03073 YP_002755215.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr) YP_002755216.1 identified by match to protein family HMM PF04326 YP_002755217.1 identified by match to protein family HMM PF01656 YP_002755218.1 identified by similarity to GB:AAT03208.1 YP_002755219.1 identified by similarity to PIR:S75756 YP_002755222.1 identified by match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01499 YP_002755223.1 identified by match to protein family HMM PF01553 YP_002755224.1 identified by match to protein family HMM PF00117; match to protein family HMM PF07722 YP_002755225.1 identified by match to protein family HMM PF02527; match to protein family HMM TIGR00138 YP_002755226.1 identified by similarity to SP:O05189; match to protein family HMM PF01656 YP_002755227.1 identified by similarity to SP:O05190; match to protein family HMM PF02195; match to protein family HMM TIGR00180 YP_002755228.1 identified by match to protein family HMM PF00534 YP_002755229.1 identified by similarity to PIR:G95290 YP_002755230.1 identified by similarity to PIR:AG2552 YP_002755231.1 identified by match to protein family HMM PF01904 YP_002755232.1 identified by match to protein family HMM PF00561 YP_002755233.1 identified by glimmer; putative YP_002755234.1 identified by similarity to GB:CAD45188.1 YP_002755235.1 identified by match to protein family HMM PF01926; match to protein family HMM PF08477; match to protein family HMM TIGR00231; match to protein family HMM TIGR00450; match to protein family HMM TIGR00650 YP_002755236.1 identified by match to protein family HMM PF01424 YP_002755237.1 identified by match to protein family HMM PF03693; match to protein family HMM TIGR02606 YP_002755238.1 identified by match to protein family HMM PF05016 YP_002755239.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate YP_002755241.1 identified by match to protein family HMM PF03652; match to protein family HMM TIGR00250 YP_002755242.1 identified by match to protein family HMM PF02618; match to protein family HMM TIGR00247 YP_002755245.1 identified by glimmer; putative YP_002755246.1 identified by glimmer; putative YP_002755247.1 identified by match to protein family HMM PF00712; match to protein family HMM PF02767; match to protein family HMM PF02768; match to protein family HMM TIGR00663 YP_002755248.1 identified by match to protein family HMM PF00072; match to protein family HMM PF02954 YP_002755249.1 identified by match to protein family HMM PF00512; match to protein family HMM PF02518 YP_002755250.1 identified by glimmer; putative YP_002755251.1 identified by similarity to SP:Q51485; match to protein family HMM PF04966 YP_002755252.1 identified by match to protein family HMM PF03601 YP_002755253.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466 YP_002755254.1 identified by match to protein family HMM PF01261 YP_002755255.1 catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_002755256.1 identified by match to protein family HMM PF00491; match to protein family HMM TIGR01229 YP_002755257.1 identified by glimmer; putative YP_002755258.1 identified by match to protein family HMM PF01381; match to protein family HMM TIGR02607 YP_002755259.1 identified by match to protein family HMM PF05015 YP_002755260.1 identified by similarity to SP:P96612; match to protein family HMM PF01820; match to protein family HMM PF02222; match to protein family HMM PF07478; match to protein family HMM TIGR01205 YP_002755261.1 identified by glimmer; putative YP_002755262.1 identified by glimmer; putative YP_002755263.1 identified by glimmer; putative YP_002755264.1 identified by match to protein family HMM PF00440 YP_002755265.1 identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM PF03764; match to protein family HMM TIGR00231 YP_002755266.1 identified by glimmer; putative YP_002755267.1 identified by glimmer; putative YP_002755268.1 identified by match to protein family HMM PF00202 YP_002755269.1 identified by match to protein family HMM PF00999 YP_002755270.1 identified by match to protein family HMM PF00892 YP_002755271.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA YP_002755272.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity YP_002755273.1 identified by match to protein family HMM PF01743; match to protein family HMM PF01966; match to protein family HMM TIGR00277 YP_002755274.1 identified by match to protein family HMM PF01272; match to protein family HMM PF03449 YP_002755275.1 identified by match to protein family HMM PF01066 YP_002755276.1 identified by match to protein family HMM PF00106; match to protein family HMM PF08659 YP_002755277.1 identified by glimmer; putative YP_002755278.1 identified by match to protein family HMM PF01487; match to protein family HMM PF01488; match to protein family HMM PF08501; match to protein family HMM TIGR00507; match to protein family HMM TIGR01093 YP_002755279.1 identified by match to protein family HMM PF01432 YP_002755281.1 identified by match to protein family HMM PF04307 YP_002755282.1 identified by match to protein family HMM PF00583 YP_002755283.1 identified by glimmer; putative YP_002755284.1 identified by match to protein family HMM PF00871; match to protein family HMM TIGR00016 YP_002755285.1 identified by similarity to SP:Q937F6; match to protein family HMM PF03894 YP_002755286.1 identified by match to protein family HMM PF01839; match to protein family HMM PF07593 YP_002755287.1 identified by glimmer; putative YP_002755288.1 identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721 YP_002755289.1 identified by glimmer; putative YP_002755290.1 identified by similarity to GB:AAR90220.1 YP_002755291.1 identified by match to protein family HMM PF01209; match to protein family HMM PF08241; match to protein family HMM PF08242 YP_002755292.1 identified by match to protein family HMM PF01740; match to protein family HMM TIGR00377 YP_002755294.1 identified by match to protein family HMM PF00756 YP_002755295.1 identified by match to protein family HMM PF01632; match to protein family HMM TIGR00001 YP_002755296.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit YP_002755297.1 identified by match to protein family HMM PF00809; match to protein family HMM TIGR01496 YP_002755298.1 identified by match to protein family HMM PF02113; match to protein family HMM TIGR00666 YP_002755300.1 identified by match to protein family HMM PF01712 YP_002755301.1 ATA is an alternate start. Shrivas; identified by similarity to SP:P03000; match to protein family HMM PF00707; match to protein family HMM PF05198; match to protein family HMM TIGR00168 YP_002755302.1 identified by match to protein family HMM PF00072 YP_002755303.1 identified by similarity to GB:AAM43466.1 YP_002755304.1 identified by similarity to GB:AAP58598.1 YP_002755305.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA YP_002755306.1 identified by glimmer; putative YP_002755307.1 identified by match to protein family HMM PF03992 YP_002755308.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis YP_002755309.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases YP_002755310.1 identified by match to protein family HMM PF02040; match to protein family HMM PF03600 YP_002755311.1 identified by glimmer; putative YP_002755312.1 identified by match to protein family HMM TIGR00515 YP_002755313.1 identified by glimmer; putative YP_002755314.1 identified by match to protein family HMM PF02572; match to protein family HMM TIGR00708 YP_002755315.1 identified by similarity to SP:Q9RWP7; match to protein family HMM PF02590 YP_002755316.1 identified by similarity to SP:P38370 YP_002755318.1 Function of MutS2 is unknown. It should not be considered a DNA mismatch repair protein. It is likely a DNA mismatch binding protein of unknown cellular function.; identified by match to protein family HMM PF00488; match to protein family HMM PF01713 YP_002755319.1 identified by glimmer; putative YP_002755320.1 identified by similarity to GB:CAA44556.1; match to protein family HMM PF00081; match to protein family HMM PF02777 YP_002755321.1 identified by match to protein family HMM PF00723; match to protein family HMM PF09137 YP_002755322.1 identified by match to protein family HMM PF00456; match to protein family HMM PF02779; match to protein family HMM PF02780; match to protein family HMM TIGR00232 YP_002755323.1 catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity YP_002755324.1 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549 YP_002755325.1 similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate YP_002755326.1 identified by match to protein family HMM PF00479; match to protein family HMM PF02781; match to protein family HMM TIGR00871 YP_002755327.1 identified by match to protein family HMM PF01182; match to protein family HMM TIGR01198 YP_002755328.1 identified by similarity to SP:P46880; match to protein family HMM PF02685; match to protein family HMM TIGR00749 YP_002755329.1 identified by match to protein family HMM PF05249 YP_002755330.1 identified by match to protein family HMM PF01433 YP_002755331.1 identified by match to protein family HMM PF02245; match to protein family HMM TIGR00567 YP_002755332.1 identified by similarity to SP:P23480; match to protein family HMM PF00578; match to protein family HMM PF08534 YP_002755333.1 identified by glimmer; putative YP_002755334.1 identified by match to protein family HMM PF02321; match to protein family HMM TIGR01845 YP_002755335.1 identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730 YP_002755336.1 identified by match to protein family HMM PF00873 YP_002755337.1 identified by similarity to GB:CAA04523.1; match to protein family HMM PF00343; match to protein family HMM TIGR02094 YP_002755338.1 identified by match to protein family HMM PF00288; match to protein family HMM PF08544; match to protein family HMM TIGR00131 YP_002755339.1 identified by match to protein family HMM PF00282 YP_002755340.1 identified by similarity to SP:P39158; match to protein family HMM PF00313 YP_002755341.1 identified by similarity to GB:BAA24495.1; match to protein family HMM PF01431; match to protein family HMM PF05649 YP_002755342.1 identified by match to protein family HMM PF00149 YP_002755343.1 identified by match to protein family HMM PF00535 YP_002755344.1 identified by match to protein family HMM PF01553 YP_002755345.1 identified by match to protein family HMM PF01266; match to protein family HMM PF01593; match to protein family HMM TIGR02734 YP_002755346.1 identified by match to protein family HMM PF00171 YP_002755347.1 identified by match to protein family HMM PF01266; match to protein family HMM PF01593; match to protein family HMM TIGR02734 YP_002755348.1 identified by match to protein family HMM PF00474 YP_002755349.1 identified by similarity to SP:Q8TYM3; match to protein family HMM PF02594 YP_002755350.1 identified by similarity to GB:AAR35917.1; match to protein family HMM PF01168; match to protein family HMM TIGR00044 YP_002755351.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase YP_002755352.1 identified by match to protein family HMM PF02517 YP_002755353.1 identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930 YP_002755354.1 identified by similarity to GB:AAW75492.1; match to protein family HMM PF08241; match to protein family HMM PF08242 YP_002755355.1 identified by match to protein family HMM PF03313; match to protein family HMM PF03315; match to protein family HMM TIGR00720 YP_002755356.1 identified by glimmer; putative YP_002755357.1 identified by match to protein family HMM PF01765; match to protein family HMM TIGR00496 YP_002755358.1 identified by similarity to GB:AAC78722.1; match to protein family HMM PF02146 YP_002755359.1 identified by match to protein family HMM PF01288; match to protein family HMM TIGR01498 YP_002755361.1 identified by match to protein family HMM PF00575; match to protein family HMM TIGR00717 YP_002755362.1 identified by glimmer; putative YP_002755363.1 identified by match to protein family HMM PF00111; match to protein family HMM PF01799; match to protein family HMM TIGR01409 YP_002755364.1 identified by match to protein family HMM PF00941 YP_002755365.1 identified by match to protein family HMM PF01315; match to protein family HMM PF02738 YP_002755366.1 identified by match to protein family HMM PF02625 YP_002755367.1 identified by similarity to GB:AAW60232.1 YP_002755368.1 identified by match to protein family HMM PF06386 YP_002755369.1 identified by similarity to GB:BAC92306.1 YP_002755370.1 identified by glimmer; putative YP_002755371.1 identified by match to protein family HMM PF00579; match to protein family HMM PF01479; match to protein family HMM TIGR00234 YP_002755372.1 identified by match to protein family HMM PF00885; match to protein family HMM TIGR00114 YP_002755373.1 identified by match to protein family HMM PF01029; match to protein family HMM TIGR01951 YP_002755374.1 identified by similarity to SP:P52046; match to protein family HMM PF00378 YP_002755375.1 identified by glimmer; putative YP_002755376.1 identified by match to protein family HMM PF00037; match to protein family HMM PF01565; match to protein family HMM PF02913 YP_002755377.1 identified by match to protein family HMM PF02826 YP_002755378.1 identified by similarity to SP:Q56232; match to protein family HMM PF00155 YP_002755379.1 identified by match to protein family HMM PF00977 YP_002755380.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase YP_002755381.1 identified by match to protein family HMM PF00117; match to protein family HMM TIGR01855 YP_002755382.1 identified by match to protein family HMM PF00475 YP_002755383.1 identified by match to protein family HMM PF00155; match to protein family HMM TIGR01141 YP_002755384.1 identified by match to protein family HMM PF00815; match to protein family HMM TIGR00069 YP_002755385.1 long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors YP_002755386.1 identified by match to protein family HMM PF01502 YP_002755387.1 identified by match to protein family HMM PF00512; match to protein family HMM PF02518 YP_002755388.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis YP_002755389.1 identified by glimmer; putative YP_002755390.1 identified by match to protein family HMM PF00152; match to protein family HMM PF01336; match to protein family HMM TIGR00459 YP_002755391.1 identified by similarity to GB:AAP58485.1; match to protein family HMM PF07605 YP_002755392.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG YP_002755393.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs YP_002755394.1 identified by similarity to SP:P25888; match to protein family HMM PF00270; match to protein family HMM PF00271 YP_002755395.1 identified by glimmer; putative YP_002755396.1 identified by match to protein family HMM PF00999; match to protein family HMM TIGR00831 YP_002755397.1 identified by similarity to GB:AAD17484.2; match to protein family HMM PF00198; match to protein family HMM PF00364; match to protein family HMM PF02817; match to protein family HMM TIGR02927 YP_002755398.1 identified by match to protein family HMM PF02222; match to protein family HMM TIGR01161 YP_002755399.1 identified by match to protein family HMM PF00731; match to protein family HMM TIGR01162 YP_002755400.1 identified by glimmer; putative YP_002755401.1 identified by glimmer; putative YP_002755402.1 identified by glimmer; putative YP_002755403.1 identified by glimmer; putative YP_002755404.1 identified by glimmer; putative YP_002755405.1 identified by glimmer; putative YP_002755406.1 identified by similarity to GB:AAP55497.1 YP_002755408.1 identified by glimmer; putative YP_002755409.1 identified by match to protein family HMM PF04860 YP_002755410.1 identified by glimmer; putative YP_002755411.1 identified by glimmer; putative YP_002755412.1 identified by glimmer; putative YP_002755413.1 identified by similarity to GB:BAC96880.1 YP_002755414.1 identified by glimmer; putative YP_002755415.1 identified by glimmer; putative YP_002755416.1 identified by glimmer; putative YP_002755417.1 identified by glimmer; putative YP_002755418.1 identified by glimmer; putative YP_002755419.1 identified by match to protein family HMM PF01408; match to protein family HMM PF02894 YP_002755420.1 identified by match to protein family HMM PF00480 YP_002755421.1 catalyzes the conversion of NADPH to NADH YP_002755422.1 identified by match to protein family HMM PF02581 YP_002755423.1 identified by glimmer; putative YP_002755424.1 identified by match to protein family HMM PF04055 YP_002755425.1 identified by match to protein family HMM PF00595 YP_002755426.1 identified by glimmer; putative YP_002755427.1 identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937 YP_002755428.1 identified by match to protein family HMM PF00149 YP_002755429.1 identified by match to protein family HMM PF00075 YP_002755430.1 identified by match to protein family HMM PF02637 YP_002755431.1 identified by match to protein family HMM PF00266; match to protein family HMM PF01053 YP_002755432.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate YP_002755433.1 identified by match to protein family HMM TIGR02605 YP_002755434.1 identified by glimmer; putative YP_002755435.1 identified by glimmer; putative YP_002755436.1 identified by match to protein family HMM PF02673 YP_002755437.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028 YP_002755438.1 identified by match to protein family HMM PF00005; match to protein family HMM PF08352 YP_002755439.1 identified by glimmer; putative YP_002755440.1 identified by glimmer; putative YP_002755441.1 identified by glimmer; putative YP_002755442.1 identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937 YP_002755443.1 identified by match to protein family HMM PF00034 YP_002755444.1 identified by glimmer; putative YP_002755445.1 identified by glimmer; putative YP_002755446.1 identified by match to protein family HMM PF00011 YP_002755447.1 identified by similarity to SP:Q9RA63; match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728 YP_002755448.1 identified by glimmer; putative YP_002755449.1 identified by similarity to SP:Q9F234; match to protein family HMM PF01055 YP_002755450.1 identified by match to protein family HMM PF00654 YP_002755451.1 identified by match to protein family HMM PF01047 YP_002755452.1 identified by similarity to GB:CAD48309.1; match to protein family HMM PF00933; match to protein family HMM PF01915; match to protein family HMM PF07691 YP_002755453.1 identified by match to protein family HMM PF00520; match to protein family HMM PF02254; match to protein family HMM PF07885 YP_002755454.1 identified by similarity to GB:CAD48309.1; match to protein family HMM PF00933; match to protein family HMM PF01915; match to protein family HMM PF07691 YP_002755455.1 identified by similarity to SP:P96105 YP_002755456.1 identified by match to protein family HMM PF00106; match to protein family HMM PF08659 YP_002755457.1 identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879 YP_002755458.1 identified by match to protein family HMM PF01103; match to protein family HMM PF07244; match to protein family HMM TIGR03303 YP_002755459.1 identified by match to protein family HMM PF03938 YP_002755460.1 identified by glimmer; putative YP_002755461.1 identified by match to protein family HMM PF02272; match to protein family HMM PF07973 YP_002755462.1 identified by match to protein family HMM PF01625; match to protein family HMM TIGR00401 YP_002755463.1 identified by glimmer; putative YP_002755464.1 identified by glimmer; putative YP_002755466.1 identified by glimmer; putative YP_002755467.1 identified by match to protein family HMM PF00703; match to protein family HMM PF02836; match to protein family HMM PF02837 YP_002755468.1 identified by similarity to SP:P45396; match to protein family HMM TIGR01670 YP_002755469.1 identified by match to protein family HMM PF00326; match to protein family HMM PF07676 YP_002755470.1 identified by match to protein family HMM PF01208; match to protein family HMM TIGR01464 YP_002755471.1 identified by match to protein family HMM PF00762; match to protein family HMM TIGR00109 YP_002755472.1 identified by match to protein family HMM PF01266; match to protein family HMM PF01593; match to protein family HMM TIGR00562 YP_002755473.1 identified by match to protein family HMM PF00034; match to protein family HMM PF00116; match to protein family HMM PF02790; match to protein family HMM TIGR02866 YP_002755474.1 identified by match to protein family HMM PF00115; match to protein family HMM TIGR02891 YP_002755475.1 identified by glimmer; putative YP_002755476.1 identified by similarity to GB:CAC12662.1 YP_002755478.1 identified by match to protein family HMM PF00034 YP_002755479.1 identified by match to protein family HMM PF00355 YP_002755480.1 identified by similarity to SP:P08502; match to protein family HMM PF00033 YP_002755481.1 identified by match to protein family HMM PF05154 YP_002755482.1 identified by match to protein family HMM PF01594 YP_002755483.1 identified by match to protein family HMM PF00140; match to protein family HMM PF03979; match to protein family HMM PF04539; match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02393; match to protein family HMM TIGR02937 YP_002755485.1 identified by match to protein family HMM PF00657 YP_002755486.1 identified by match to protein family HMM PF00657 YP_002755487.1 identified by glimmer; putative YP_002755488.1 identified by glimmer; putative YP_002755489.1 identified by glimmer; putative YP_002755490.1 identified by glimmer; putative YP_002755491.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer YP_002755492.1 identified by match to protein family HMM PF00665 YP_002755493.1 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine YP_002755495.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF08659 YP_002755496.1 identified by similarity to SP:P06134; match to protein family HMM PF00165; match to protein family HMM PF01035; match to protein family HMM PF02805; match to protein family HMM PF02870; match to protein family HMM TIGR00589 YP_002755497.1 identified by glimmer; putative YP_002755498.1 identified by match to protein family HMM PF00206; match to protein family HMM TIGR00928 YP_002755499.1 identified by similarity to SP:P09550; match to protein family HMM PF02441; match to protein family HMM TIGR00421 YP_002755500.1 identified by match to protein family HMM PF02517 YP_002755501.1 identified by similarity to SP:P30867; match to protein family HMM PF03255; match to protein family HMM TIGR00513 YP_002755502.1 identified by similarity to SP:P37769; match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF08659 YP_002755503.1 identified by match to protein family HMM PF00156; match to protein family HMM TIGR00336 YP_002755504.1 identified by match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM TIGR00254 YP_002755505.1 identified by similarity to GB:AAU23474.1; match to protein family HMM PF06912 YP_002755506.1 identified by similarity to GB:AAC46302.1; match to protein family HMM PF00070; match to protein family HMM PF01266; match to protein family HMM PF07992 YP_002755507.1 identified by match to protein family HMM PF01596 YP_002755508.1 identified by glimmer; putative YP_002755509.1 identified by glimmer; putative YP_002755510.1 identified by match to protein family HMM PF01063; match to protein family HMM TIGR01122 YP_002755511.1 identified by match to protein family HMM PF01914; match to protein family HMM TIGR00427 YP_002755512.1 identified by glimmer; putative YP_002755513.1 identified by glimmer; putative YP_002755514.1 identified by glimmer; putative YP_002755515.1 identified by similarity to PIR:A75262; match to protein family HMM PF03060 YP_002755516.1 identified by match to protein family HMM PF03625 YP_002755517.1 identified by glimmer; putative YP_002755518.1 identified by glimmer; putative YP_002755519.1 identified by glimmer; putative YP_002755520.1 identified by glimmer; putative YP_002755521.1 identified by glimmer; putative YP_002755522.1 identified by match to protein family HMM PF00756 YP_002755523.1 identified by match to protein family HMM TIGR00305 YP_002755524.1 identified by similarity to GB:BAC88219.1; match to protein family HMM TIGR01552 YP_002755525.1 identified by glimmer; putative YP_002755526.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes YP_002755527.1 identified by glimmer; putative YP_002755528.1 identified by match to protein family HMM PF00392 YP_002755529.1 identified by match to protein family HMM PF00005 YP_002755531.1 identified by glimmer; putative YP_002755532.1 identified by match to protein family HMM TIGR01730 YP_002755533.1 identified by match to protein family HMM PF00005 YP_002755534.1 identified by match to protein family HMM PF02687; match to protein family HMM TIGR03434 YP_002755535.1 identified by match to protein family HMM PF00005 YP_002755536.1 identified by match to protein family HMM PF02321 YP_002755537.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM PF07728 YP_002755538.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518 YP_002755539.1 identified by match to protein family HMM PF02687; match to protein family HMM TIGR03434 YP_002755540.1 identified by match to protein family HMM PF02687; match to protein family HMM TIGR03434 YP_002755541.1 identified by match to protein family HMM PF02687; match to protein family HMM TIGR03434 YP_002755542.1 identified by match to protein family HMM PF01204 YP_002755543.1 identified by glimmer; putative YP_002755544.1 identified by glimmer; putative YP_002755545.1 identified by match to protein family HMM PF00128 YP_002755546.1 identified by similarity to SP:O68390; match to protein family HMM PF02566 YP_002755548.1 identified by similarity to GB:AAM41488.1 YP_002755549.1 identified by match to protein family HMM PF00128 YP_002755550.1 identified by match to protein family HMM PF00248 YP_002755551.1 identified by match to protein family HMM PF00450 YP_002755552.1 identified by glimmer; putative YP_002755553.1 identified by match to protein family HMM PF00037 YP_002755554.1 identified by glimmer; putative YP_002755555.1 identified by glimmer; putative YP_002755556.1 identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721 YP_002755557.1 identified by similarity to GB:BAA86934.1; match to protein family HMM PF08760 YP_002755558.1 identified by glimmer; putative YP_002755559.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; match to protein family HMM TIGR00879 YP_002755560.1 identified by match to protein family HMM PF02321; match to protein family HMM TIGR01845 YP_002755562.1 identified by match to protein family HMM PF00005 YP_002755563.1 identified by match to protein family HMM PF02687 YP_002755564.1 identified by match to protein family HMM PF00011 YP_002755565.1 identified by match to protein family HMM PF00582 YP_002755566.1 identified by glimmer; putative YP_002755567.1 identified by match to protein family HMM PF04972 YP_002755568.1 identified by match to protein family HMM PF04972 YP_002755569.1 identified by similarity to SP:P46322; match to protein family HMM PF01066 YP_002755570.1 identified by glimmer; putative YP_002755571.1 identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738 YP_002755572.1 identified by similarity to SP:P39171; match to protein family HMM PF00266; match to protein family HMM PF01212 YP_002755573.1 identified by match to protein family HMM PF01592; match to protein family HMM TIGR01999 YP_002755574.1 identified by match to protein family HMM PF01521; match to protein family HMM TIGR00049 YP_002755575.1 identified by similarity to SP:P36540; match to protein family HMM PF00226 YP_002755576.1 identified by match to protein family HMM PF01361 YP_002755577.1 identified by match to protein family HMM PF00012; match to protein family HMM TIGR01991 YP_002755578.1 identified by match to protein family HMM PF00111 YP_002755579.1 identified by similarity to GB:BAC90157.1; match to protein family HMM PF04384; match to protein family HMM TIGR03412 YP_002755580.1 identified by similarity to SP:P06128; match to protein family HMM PF01547; match to protein family HMM TIGR00975 YP_002755581.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR02138 YP_002755582.1 identified by similarity to SP:P07654; match to protein family HMM PF00528; match to protein family HMM TIGR00974 YP_002755583.1 identified by glimmer; putative YP_002755584.1 identified by match to protein family HMM PF00578; match to protein family HMM PF08534 YP_002755585.1 identified by match to protein family HMM PF02567; match to protein family HMM TIGR00654 YP_002755586.1 identified by match to protein family HMM PF00005; match to protein family HMM PF02463 YP_002755587.1 identified by match to protein family HMM PF05973; match to protein family HMM TIGR02683 YP_002755588.1 identified by match to protein family HMM PF00507 YP_002755589.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen YP_002755590.1 identified by match to protein family HMM PF00329 YP_002755591.1 identified by match to protein family HMM PF00346 YP_002755592.1 identified by similarity to SP:P33604; match to protein family HMM PF00037 YP_002755593.1 identified by match to protein family HMM PF00146 YP_002755594.1 identified by match to protein family HMM PF00499 YP_002755595.1 identified by match to protein family HMM PF00420 YP_002755596.1 identified by match to protein family HMM PF00361; match to protein family HMM PF00662; match to protein family HMM TIGR01974 YP_002755597.1 identified by match to protein family HMM PF00361; match to protein family HMM TIGR01972 YP_002755598.1 identified by match to protein family HMM PF00361; match to protein family HMM TIGR01972 YP_002755599.1 identified by match to protein family HMM PF00361; match to protein family HMM TIGR01770 YP_002755600.1 identified by match to protein family HMM PF00753; match to protein family HMM PF03772; match to protein family HMM TIGR00360; match to protein family HMM TIGR00361 YP_002755601.1 identified by similarity to SP:P55135; match to protein family HMM PF01938; match to protein family HMM PF05958; match to protein family HMM TIGR00479 YP_002755602.1 identified by glimmer; putative YP_002755603.1 identified by match to protein family HMM PF03309; match to protein family HMM TIGR00671 YP_002755604.1 identified by match to protein family HMM PF03099; match to protein family HMM TIGR00121 YP_002755605.1 identified by match to protein family HMM PF01729; match to protein family HMM PF02749; match to protein family HMM TIGR00078 YP_002755606.1 identified by match to protein family HMM PF00133; match to protein family HMM PF08264; match to protein family HMM PF09334; match to protein family HMM TIGR00422 YP_002755608.1 identified by match to protein family HMM PF00834; match to protein family HMM TIGR01163 YP_002755609.1 identified by glimmer; putative YP_002755610.1 identified by glimmer; putative YP_002755611.1 identified by match to protein family HMM PF00534 YP_002755612.1 identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093 YP_002755613.1 identified by similarity to SP:P35155; match to protein family HMM PF04079; match to protein family HMM TIGR00281 YP_002755614.1 identified by similarity to SP:P35154; match to protein family HMM PF02616 YP_002755615.1 identified by glimmer; putative YP_002755616.1 identified by match to protein family HMM PF00579; match to protein family HMM TIGR00233 YP_002755617.1 identified by match to protein family HMM PF02163 YP_002755618.1 identified by match to protein family HMM PF07883 YP_002755620.1 identified by match to protein family HMM PF04402 YP_002755621.1 identified by match to protein family HMM PF00591; match to protein family HMM PF02885; match to protein family HMM TIGR01245 YP_002755622.1 identified by match to protein family HMM PF00082; match to protein family HMM PF09286 YP_002755623.1 identified by glimmer; putative YP_002755624.1 identified by match to protein family HMM PF00263; match to protein family HMM PF07719 YP_002755625.1 identified by glimmer; putative YP_002755626.1 identified by match to protein family HMM PF04542; match to protein family HMM PF08281; match to protein family HMM TIGR02937 YP_002755627.1 identified by glimmer; putative YP_002755628.1 identified by match to protein family HMM PF01695 YP_002755630.1 identified by match to protein family HMM PF00665 YP_002755631.1 identified by match to protein family HMM PF01527 YP_002755632.1 identified by glimmer; putative YP_002755633.1 catalyzes the interconversion of succinyl-CoA and succinate YP_002755634.1 identified by match to protein family HMM PF05635 YP_002755635.1 identified by similarity to SP:P80865; match to protein family HMM PF00549; match to protein family HMM PF02629; match to protein family HMM TIGR01019 YP_002755636.1 identified by glimmer; putative YP_002755637.1 identified by match to protein family HMM PF01850 YP_002755638.1 identified by similarity to SP:Q59636; match to protein family HMM PF00334 YP_002755639.1 identified by similarity to GB:AAO58875.1 YP_002755640.1 identified by match to protein family HMM PF00248 YP_002755641.1 identified by match to protein family HMM PF00665 YP_002755642.1 identified by match to protein family HMM PF00440 YP_002755643.1 identified by glimmer; putative YP_002755644.1 identified by glimmer; putative YP_002755645.1 identified by similarity to SP:P0A8G0 YP_002755646.1 identified by match to protein family HMM PF01523 YP_002755647.1 identified by match to protein family HMM PF01523 YP_002755648.1 identified by similarity to PIR:F69804 YP_002755649.1 identified by similarity to GB:BAC90924.1 YP_002755650.1 identified by similarity to GB:BAC90923.1 YP_002755651.1 identified by similarity to SP:P23516; match to protein family HMM PF03824; match to protein family HMM TIGR00802 YP_002755652.1 identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF01926; match to protein family HMM PF03144; match to protein family HMM TIGR00231; match to protein family HMM TIGR01394 YP_002755653.1 identified by match to protein family HMM PF01381; match to protein family HMM PF07883 YP_002755654.1 identified by match to protein family HMM PF01370; match to protein family HMM PF08338; match to protein family HMM TIGR01777 YP_002755655.1 identified by match to protein family HMM PF00041 YP_002755656.1 identified by match to protein family HMM PF01557 YP_002755657.1 maintains the balance of metabolites in the pentose-phosphate pathway YP_002755658.1 identified by match to protein family HMM PF07977; match to protein family HMM TIGR01750 YP_002755659.1 identified by match to protein family HMM PF00132; match to protein family HMM TIGR01852 YP_002755660.1 identified by match to protein family HMM PF06230 YP_002755661.1 identified by match to protein family HMM PF00578; match to protein family HMM PF08534 YP_002755662.1 identified by glimmer; putative YP_002755663.1 identified by match to protein family HMM PF01464; match to protein family HMM PF01476 YP_002755664.1 binds to the ribosome on the universally-conserved alpha-sarcin loop YP_002755665.1 identified by match to protein family HMM PF07859 YP_002755666.1 identified by match to protein family HMM PF01925 YP_002755667.1 identified by match to protein family HMM PF00753 YP_002755668.1 identified by match to protein family HMM PF00326; match to protein family HMM PF00930 YP_002755669.1 identified by similarity to SP:P75831; match to protein family HMM PF02687 YP_002755670.1 identified by similarity to SP:P24828; match to protein family HMM PF02073 YP_002755671.1 identified by match to protein family HMM PF01170; match to protein family HMM PF05175; match to protein family HMM PF06325; match to protein family HMM PF08241; match to protein family HMM TIGR00536; match to protein family HMM TIGR03387 YP_002755672.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2 YP_002755673.1 identified by similarity to SP:Q9HHC4; match to protein family HMM PF01068; match to protein family HMM PF04675; match to protein family HMM PF04679; match to protein family HMM TIGR00574 YP_002755674.1 identified by match to protein family HMM PF01156 YP_002755675.1 identified by similarity to SP:P75757; match to protein family HMM PF01545; match to protein family HMM TIGR01297 YP_002755676.1 identified by glimmer; putative YP_002755677.1 heat shock protein involved in degradation of misfolded proteins YP_002755678.1 heat shock protein involved in degradation of misfolded proteins YP_002755679.1 identified by match to protein family HMM PF00665 YP_002755680.1 identified by similarity to GB:BAB67576.1; match to protein family HMM PF02656 YP_002755681.1 identified by glimmer; putative YP_002755682.1 identified by similarity to GB:AAN56319.1 YP_002755683.1 identified by glimmer; putative YP_002755684.1 identified by glimmer; putative YP_002755685.1 identified by similarity to GB:BAC69278.1 YP_002755686.1 identified by glimmer; putative YP_002755687.1 identified by match to protein family HMM PF01566; match to protein family HMM TIGR01197 YP_002755688.1 identified by match to protein family HMM PF01325; match to protein family HMM PF02742; match to protein family HMM PF04023 YP_002755689.1 identified by glimmer; putative YP_002755690.1 identified by glimmer; putative YP_002755691.1 identified by similarity to GB:BAC12185.1 YP_002755692.1 identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937 YP_002755693.1 identified by match to protein family HMM PF07681 YP_002755694.1 identified by glimmer; putative YP_002755695.1 identified by similarity to GB:CAF24589.1; match to protein family HMM PF05114 YP_002755696.1 identified by glimmer; putative YP_002755697.1 identified by glimmer; putative YP_002755698.1 identified by match to protein family HMM PF00295; match to protein family HMM PF01095 YP_002755699.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07729 YP_002755700.1 identified by match to protein family HMM PF00295 YP_002755701.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF08659 YP_002755702.1 identified by similarity to GB:CAD73602.1 YP_002755703.1 identified by glimmer; putative YP_002755704.1 identified by similarity to GB:CAD78911.1 YP_002755705.1 identified by match to protein family HMM PF07690 YP_002755706.1 catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate; functions in glucuronic and galacturonic metabolism YP_002755707.1 identified by similarity to GB:CAA70873.1; match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176 YP_002755708.1 identified by similarity to SP:P45802; match to protein family HMM PF01479 YP_002755709.1 identified by glimmer; putative YP_002755710.1 identified by similarity to SP:P33973; match to protein family HMM PF00069; match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07720 YP_002755711.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518 YP_002755712.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00486 YP_002755713.1 identified by match to protein family HMM PF01095 YP_002755714.1 identified by match to protein family HMM PF01266; match to protein family HMM PF01593; match to protein family HMM TIGR00562 YP_002755715.1 identified by match to protein family HMM PF04055 YP_002755716.1 identified by similarity to GB:AAC72074.1 YP_002755717.1 identified by match to protein family HMM PF04055 YP_002755718.1 identified by match to protein family HMM PF01242; match to protein family HMM TIGR03367 YP_002755719.1 identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01512; match to protein family HMM TIGR01525 YP_002755720.1 identified by glimmer; putative YP_002755721.1 identified by match to protein family HMM PF00070; match to protein family HMM PF07992; match to protein family HMM TIGR01292 YP_002755722.1 identified by glimmer; putative YP_002755724.1 identified by similarity to GB:AAW76325.1 YP_002755725.1 identified by match to protein family HMM PF00593; match to protein family HMM PF07715 YP_002755726.1 identified by match to protein family HMM PF00501; match to protein family HMM PF01553 YP_002755727.1 identified by match to protein family HMM PF00773 YP_002755728.1 identified by match to protein family HMM PF01226 YP_002755729.1 catalyzes the conversion of 1-proline-5-carboxylate dehydrogenase to L-glutamate YP_002755730.1 identified by match to protein family HMM PF00196 YP_002755731.1 identified by match to protein family HMM PF00070; match to protein family HMM PF00072; match to protein family HMM PF01266; match to protein family HMM PF07992 YP_002755732.1 identified by match to protein family HMM PF00027; match to protein family HMM PF02518 YP_002755733.1 identified by match to protein family HMM PF01618 YP_002755734.1 identified by similarity to SP:P09349; match to protein family HMM PF00691 YP_002755735.1 identified by match to protein family HMM PF01494; match to protein family HMM PF05834 YP_002755736.1 identified by match to protein family HMM PF00498; match to protein family HMM PF01590; match to protein family HMM PF07228 YP_002755737.1 identified by glimmer; putative YP_002755738.1 identified by match to protein family HMM PF04185 YP_002755739.1 identified by match to protein family HMM TIGR02401 YP_002755740.1 identified by match to protein family HMM PF00128; match to protein family HMM PF02922; match to protein family HMM TIGR02402 YP_002755741.1 identified by similarity to GB:CAB93734.1 YP_002755742.1 identified by match to protein family HMM PF03150 YP_002755743.1 identified by match to protein family HMM PF04185 YP_002755744.1 identified by glimmer; putative YP_002755745.1 identified by match to protein family HMM PF04185; match to protein family HMM TIGR01409 YP_002755746.1 Enables the enzymatic reduction of mercuric ions to elemental mercury YP_002755748.1 identified by match to protein family HMM PF00132; match to protein family HMM TIGR01172 YP_002755749.1 identified by match to protein family HMM PF00291; match to protein family HMM TIGR01136; match to protein family HMM TIGR01139 YP_002755750.1 identified by match to protein family HMM PF00005 YP_002755751.1 identified by similarity to GB:AAC34747.1 YP_002755752.1 identified by glimmer; putative YP_002755753.1 identified by similarity to SP:Q56694; match to protein family HMM PF00171 YP_002755754.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07729 YP_002755755.1 identified by similarity to GB:AAM39029.1 YP_002755756.1 malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate YP_002755757.1 identified by match to protein family HMM PF00296 YP_002755758.1 identified by glimmer; putative YP_002755759.1 identified by match to protein family HMM PF02837 YP_002755760.1 identified by glimmer; putative YP_002755762.1 identified by match to protein family HMM PF00204; match to protein family HMM PF00986; match to protein family HMM PF01751; match to protein family HMM PF02518; match to protein family HMM TIGR01059 YP_002755763.1 identified by glimmer; putative YP_002755766.1 involved in the peptidyltransferase reaction during translation YP_002755767.1 identified by match to protein family HMM PF00829; match to protein family HMM TIGR00061 YP_002755768.1 identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937 YP_002755769.1 identified by glimmer; putative YP_002755770.1 identified by match to protein family HMM PF00665 YP_002755771.1 identified by glimmer; putative YP_002755772.1 identified by match to protein family HMM TIGR02276 YP_002755773.1 identified by match to protein family HMM PF00793; match to protein family HMM TIGR01361 YP_002755774.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229 YP_002755775.1 identified by match to protein family HMM PF00665 YP_002755776.1 identified by match to protein family HMM PF01578 YP_002755777.1 identified by similarity to GB:BAC91347.1 YP_002755778.1 identified by glimmer; putative YP_002755779.1 identified by match to protein family HMM PF03379 YP_002755780.1 identified by similarity to SP:P36922; match to protein family HMM PF04073; match to protein family HMM TIGR00011 YP_002755781.1 identified by similarity to SP:P46903; match to protein family HMM PF00005 YP_002755782.1 identified by similarity to GB:AAD19541.1 YP_002755783.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine YP_002755785.1 identified by similarity to SP:P37571; similarity to GB:AAC44446.1; match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728 YP_002755786.1 identified by similarity to SP:P75957; match to protein family HMM PF00005 YP_002755787.1 identified by glimmer; putative YP_002755788.1 identified by match to protein family HMM PF02687 YP_002755789.1 identified by similarity to GB:BAC89906.1; match to protein family HMM PF07494 YP_002755790.1 identified by glimmer; putative YP_002755791.1 identified by glimmer; putative YP_002755792.1 identified by glimmer; putative YP_002755793.1 identified by match to protein family HMM PF00370; match to protein family HMM PF02782; match to protein family HMM TIGR01312 YP_002755794.1 identified by match to protein family HMM PF00293 YP_002755795.1 identified by match to protein family HMM PF02535 YP_002755797.1 identified by similarity to SP:P38370; match to protein family HMM PF07715 YP_002755798.1 identified by match to protein family HMM PF00072 YP_002755799.1 identified by match to protein family HMM PF01578 YP_002755800.1 identified by similarity to SP:P45405 YP_002755801.1 identified by glimmer; putative YP_002755802.1 identified by match to protein family HMM PF00326 YP_002755803.1 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549 YP_002755804.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion YP_002755805.1 catalyzes the phosphorylation of ribulose to ribulose 5-phosphate YP_002755807.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; match to protein family HMM TIGR00879 YP_002755808.1 identified by glimmer; putative YP_002755809.1 catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source YP_002755810.1 identified by similarity to GB:AAO75244.1; match to protein family HMM PF07944; match to protein family HMM TIGR01409 YP_002755811.1 identified by similarity to SP:P82593; match to protein family HMM PF02018; match to protein family HMM PF06964 YP_002755812.1 identified by match to protein family HMM PF00532 YP_002755813.1 identified by match to protein family HMM PF01263 YP_002755814.1 converts threonine and NAD to 1,2-amino-3-oxobutanoate and NADH; functions in threonine catabolism YP_002755815.1 identified by match to protein family HMM PF00593 YP_002755816.1 identified by glimmer; putative YP_002755817.1 identified by similarity to PIR:E95360 YP_002755818.1 identified by similarity to PIR:E95360 YP_002755819.1 identified by match to protein family HMM PF02585 YP_002755820.1 identified by match to protein family HMM PF01351 YP_002755821.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site YP_002755822.1 identified by similarity to GB:AAU49996.1 YP_002755823.1 identified by match to protein family HMM PF01569 YP_002755824.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA YP_002755825.1 identified by match to protein family HMM PF01782; match to protein family HMM PF05239; match to protein family HMM TIGR02273 YP_002755826.1 identified by similarity to GB:CAE79962.1 YP_002755827.1 identified by match to protein family HMM PF00886; match to protein family HMM TIGR00002 YP_002755828.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229 YP_002755829.1 identified by match to protein family HMM PF00501; match to protein family HMM TIGR02188 YP_002755830.1 identified by similarity to SP:P42216; match to protein family HMM PF02348; match to protein family HMM TIGR00466 YP_002755831.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690 YP_002755832.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00196 YP_002755833.1 identified by glimmer; putative YP_002755834.1 identified by glimmer; putative YP_002755835.1 identified by match to protein family HMM PF00248 YP_002755836.1 identified by match to protein family HMM PF02779; match to protein family HMM PF02780; match to protein family HMM TIGR00204 YP_002755837.1 identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930 YP_002755838.1 identified by similarity to SP:Q9H845; match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028 YP_002755839.1 identified by glimmer; putative YP_002755840.1 identified by match to protein family HMM PF00082; match to protein family HMM PF09286 YP_002755841.1 identified by similarity to GB:AAL60195.1; match to protein family HMM PF02129; match to protein family HMM PF08530; match to protein family HMM TIGR00976 YP_002755842.1 catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1,6-bisphosphate; in Streptococcus pyogenes there are two paralogs of tagatose-bisphosphate aldolase, encoded by lacD1 and lacD2; expression of lacD1 is highly regulated by environmental conditions while lacD2 specializes in an efficient utilization of carbohydrate sources YP_002755843.1 identified by similarity to SP:P03842; match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM TIGR01966 YP_002755844.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM PF07728 YP_002755845.1 identified by glimmer; putative YP_002755846.1 identified by match to protein family HMM PF00583 YP_002755847.1 identified by match to protein family HMM PF00905; match to protein family HMM PF00912 YP_002755848.1 identified by match to protein family HMM PF00587; match to protein family HMM PF03129; match to protein family HMM PF04073; match to protein family HMM TIGR00409 YP_002755849.1 identified by glimmer; putative YP_002755850.1 identified by match to protein family HMM PF03061; match to protein family HMM TIGR00051 YP_002755851.1 identified by match to protein family HMM TIGR00028 YP_002755852.1 identified by similarity to GB:CAE55498.1; match to protein family HMM PF01402 YP_002755853.1 identified by match to protein family HMM PF02310; match to protein family HMM TIGR00640 YP_002755854.1 identified by match to protein family HMM PF00486 YP_002755855.1 identified by similarity to SP:P19641; match to protein family HMM PF00348 YP_002755856.1 putative nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription YP_002755857.1 identified by match to protein family HMM PF01026; match to protein family HMM TIGR00010 YP_002755858.1 identified by match to protein family HMM PF00133; match to protein family HMM PF01588; match to protein family HMM PF09334; match to protein family HMM TIGR00398; match to protein family HMM TIGR00399 YP_002755859.1 identified by similarity to SP:P11875; match to protein family HMM PF00750; match to protein family HMM PF03485; match to protein family HMM PF05746 YP_002755861.1 identified by match to protein family HMM PF06539 YP_002755862.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate YP_002755863.1 identified by glimmer; putative YP_002755864.1 identified by glimmer; putative YP_002755865.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA YP_002755866.1 identified by similarity to PIR:E82476 YP_002755867.1 identified by match to protein family HMM PF01435 YP_002755868.1 identified by match to protein family HMM PF03330; match to protein family HMM PF05036; match to protein family HMM TIGR00413 YP_002755869.1 identified by glimmer; putative YP_002755870.1 identified by glimmer; putative YP_002755871.1 identified by match to protein family HMM PF04055 YP_002755872.1 identified by similarity to GB:CAE29093.1 YP_002755873.1 identified by match to protein family HMM PF00070; match to protein family HMM PF00890; match to protein family HMM PF01134; match to protein family HMM PF01266; match to protein family HMM PF02852; match to protein family HMM PF03486; match to protein family HMM PF07992; match to protein family HMM TIGR01350 YP_002755874.1 identified by match to protein family HMM PF05569; match to protein family HMM TIGR01352 YP_002755875.1 identified by match to protein family HMM PF03965 YP_002755876.1 identified by match to protein family HMM PF03099; match to protein family HMM TIGR00214 YP_002755877.1 identified by similarity to GB:CAF23550.1 YP_002755878.1 identified by similarity to SP:Q02540; match to protein family HMM PF00072; match to protein family HMM PF00486 YP_002755879.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518 YP_002755880.1 identified by match to protein family HMM PF02705 YP_002755881.1 identified by glimmer; putative YP_002755882.1 identified by match to protein family HMM PF01258 YP_002755883.1 identified by glimmer; putative YP_002755884.1 PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP YP_002755885.1 identified by glimmer; putative YP_002755886.1 identified by glimmer; putative YP_002755887.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis YP_002755888.1 identified by match to protein family HMM PF00708 YP_002755889.1 identified by glimmer; putative YP_002755890.1 identified by glimmer; putative YP_002755891.1 identified by glimmer; putative YP_002755892.1 identified by match to protein family HMM PF01132; match to protein family HMM PF08207; match to protein family HMM PF09285; match to protein family HMM TIGR00038 YP_002755893.1 identified by glimmer; putative YP_002755894.1 identified by glimmer; putative YP_002755895.1 identified by similarity to PIR:A01122; match to protein family HMM PF00117; match to protein family HMM TIGR00566 YP_002755896.1 identified by match to protein family HMM PF01402 YP_002755897.1 identified by match to protein family HMM PF05016 YP_002755898.1 identified by match to protein family HMM PF00425; match to protein family HMM PF04715; match to protein family HMM TIGR00564 YP_002755899.1 identified by similarity to SP:P96110; match to protein family HMM PF00208; match to protein family HMM PF02812 YP_002755900.1 identified by glimmer; putative YP_002755901.1 identified by glimmer; putative YP_002755902.1 identified by match to protein family HMM PF01850 YP_002755903.1 identified by similarity to SP:P46322; match to protein family HMM PF01066; match to protein family HMM TIGR00560 YP_002755904.1 identified by match to protein family HMM PF01842; match to protein family HMM PF01966; match to protein family HMM PF02824; match to protein family HMM PF04607; match to protein family HMM TIGR00691 YP_002755905.1 identified by match to protein family HMM PF00581; match to protein family HMM PF00899; match to protein family HMM PF05237 YP_002755906.1 identified by match to protein family HMM PF02597 YP_002755907.1 identified by match to protein family HMM PF01398 YP_002755908.1 identified by match to protein family HMM PF00291; match to protein family HMM TIGR01136 YP_002755909.1 identified by glimmer; putative YP_002755910.1 identified by glimmer; putative YP_002755911.1 identified by match to protein family HMM PF02517 YP_002755912.1 identified by match to protein family HMM PF00005; match to protein family HMM TIGR00630 YP_002755913.1 identified by glimmer; putative YP_002755914.1 identified by glimmer; putative YP_002755915.1 identified by glimmer; putative YP_002755916.1 identified by match to protein family HMM PF00881 YP_002755917.1 identified by match to protein family HMM PF00293 YP_002755918.1 identified by glimmer; putative YP_002755919.1 identified by match to protein family HMM PF00590; match to protein family HMM TIGR00096 YP_002755920.1 identified by match to protein family HMM PF00571; match to protein family HMM PF02163 YP_002755921.1 identified by match to protein family HMM PF03602; match to protein family HMM TIGR00095 YP_002755922.1 identified by similarity to GB:CAD16765.1; match to protein family HMM PF04014 YP_002755923.1 identified by match to protein family HMM PF00749; match to protein family HMM TIGR00464 YP_002755924.1 identified by match to protein family HMM PF02769; match to protein family HMM TIGR01379 YP_002755925.1 identified by match to protein family HMM PF01551 YP_002755926.1 identified by glimmer; putative YP_002755927.1 identified by glimmer; putative YP_002755928.1 identified by glimmer; putative YP_002755929.1 identified by glimmer; putative YP_002755930.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu YP_002755931.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group have the CXXC motif YP_002755932.1 identified by similarity to SP:Q06799; match to protein family HMM PF00584; match to protein family HMM TIGR00964 YP_002755933.1 identified by match to protein family HMM PF00467; match to protein family HMM PF02357; match to protein family HMM TIGR00922 YP_002755934.1 binds directly to 23S ribosomal RNA YP_002755935.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA YP_002755936.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit YP_002755937.1 identified by match to protein family HMM PF00542; match to protein family HMM TIGR00855 YP_002755938.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme YP_002755939.1 identified by match to protein family HMM PF00623; match to protein family HMM PF04983; match to protein family HMM PF04997; match to protein family HMM PF04998; match to protein family HMM PF05000; match to protein family HMM TIGR02386 YP_002755940.1 identified by match to protein family HMM PF00924 YP_002755941.1 catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine YP_002755942.1 identified by match to protein family HMM PF00248 YP_002755943.1 identified by match to protein family HMM PF00440 YP_002755944.1 identified by match to protein family HMM PF00593; match to protein family HMM PF07715 YP_002755945.1 identified by glimmer; putative YP_002755946.1 identified by match to protein family HMM PF04055; match to protein family HMM PF06463; match to protein family HMM TIGR02666 YP_002755947.1 identified by similarity to GB:AAM37868.1 YP_002755948.1 identified by similarity to GB:AAW90366.1 YP_002755949.1 identified by glimmer; putative YP_002755950.1 identified by match to protein family HMM PF00023 YP_002755951.1 identified by match to protein family HMM PF00293 YP_002755952.1 identified by match to protein family HMM PF00440 YP_002755953.1 identified by similarity to SP:P27304; match to protein family HMM PF07690; match to protein family HMM TIGR00711 YP_002755954.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit YP_002755955.1 identified by match to protein family HMM PF00380 YP_002755956.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit YP_002755957.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu YP_002755958.1 identified by similarity to GB:AAF72523.1; match to protein family HMM PF00595; match to protein family HMM PF00930; match to protein family HMM PF03572; match to protein family HMM PF07676 YP_002755959.1 Catalyzes the phosphorylation of UMP to UDP YP_002755960.1 identified by match to protein family HMM PF01757 YP_002755962.1 identified by glimmer; putative YP_002755963.1 identified by match to protein family HMM PF01431; match to protein family HMM PF05649 YP_002755964.1 identified by match to protein family HMM PF02470 YP_002755965.1 identified by glimmer; putative YP_002755966.1 identified by glimmer; putative YP_002755967.1 identified by similarity to SP:P27034; match to protein family HMM PF00933; match to protein family HMM PF01915 YP_002755968.1 identified by match to protein family HMM PF01547; match to protein family HMM TIGR00975 YP_002755969.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides YP_002755970.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation YP_002755971.1 identified by match to protein family HMM PF00263; match to protein family HMM PF03958 YP_002755972.1 identified by similarity to GB:AAM62415.1; match to protein family HMM PF07963; match to protein family HMM TIGR02532 YP_002755973.1 identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532 YP_002755974.1 identified by glimmer; putative YP_002755975.1 identified by match to protein family HMM PF01926; match to protein family HMM TIGR00231; match to protein family HMM TIGR00650; match to protein family HMM TIGR03598 YP_002755977.1 identified by similarity to SP:P45856; match to protein family HMM PF00725; match to protein family HMM PF02737 YP_002755978.1 identified by match to protein family HMM PF00753 YP_002755979.1 identified by glimmer; putative YP_002755980.1 identified by similarity to SP:P25996; match to protein family HMM PF01180; match to protein family HMM TIGR01037 YP_002755981.1 identified by match to protein family HMM PF02358; match to protein family HMM TIGR00685; match to protein family HMM TIGR01484 YP_002755982.1 identified by similarity to SP:Q92410; match to protein family HMM PF00982 YP_002755983.1 identified by match to protein family HMM PF01740; match to protein family HMM TIGR00377 YP_002755984.1 identified by match to protein family HMM PF02518 YP_002755985.1 identified by glimmer; putative YP_002755986.1 identified by match to protein family HMM PF00571; match to protein family HMM PF03448 YP_002755987.1 identified by match to protein family HMM PF01566 YP_002755988.1 identified by match to protein family HMM PF00293 YP_002755989.1 identified by match to protein family HMM PF01497 YP_002755990.1 identified by match to protein family HMM PF00702 YP_002755991.1 identified by match to protein family HMM PF00589; match to protein family HMM PF02899 YP_002755992.1 identified by match to protein family HMM PF00589; match to protein family HMM PF02899 YP_002755993.1 identified by similarity to SP:P10408; match to protein family HMM PF01043; match to protein family HMM PF02810; match to protein family HMM PF07516; match to protein family HMM PF07517; match to protein family HMM TIGR00963 YP_002755994.1 identified by match to protein family HMM PF01928 YP_002755995.1 identified by match to protein family HMM PF01300; match to protein family HMM PF03481; match to protein family HMM TIGR00057 YP_002755997.1 identified by similarity to SP:P06710 YP_002755998.1 identified by match to protein family HMM PF00067 YP_002755999.1 identified by match to protein family HMM PF02223; match to protein family HMM TIGR00041 YP_002756000.1 identified by match to protein family HMM PF00206; match to protein family HMM TIGR00838 YP_002756001.1 identified by similarity to SP:Q51742; match to protein family HMM PF00185; match to protein family HMM PF02729; match to protein family HMM TIGR00658 YP_002756002.1 identified by similarity to SP:P54752; match to protein family HMM PF00202; match to protein family HMM TIGR00707 YP_002756003.1 identified by match to protein family HMM PF00696; match to protein family HMM TIGR00761 YP_002756004.1 identified by match to protein family HMM PF01118; match to protein family HMM PF02774; match to protein family HMM TIGR01850 YP_002756005.1 identified by similarity to SP:P17893; match to protein family HMM PF01316; match to protein family HMM PF02863 YP_002756006.1 identified by similarity to SP:Q05755; match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898 YP_002756007.1 identified by glimmer; putative YP_002756008.1 identified by glimmer; putative YP_002756009.1 identified by match to protein family HMM PF00326; match to protein family HMM PF02897 YP_002756010.1 identified by glimmer; putative YP_002756011.1 identified by match to protein family HMM PF07884 YP_002756012.1 identified by match to protein family HMM PF03649; match to protein family HMM TIGR00245 YP_002756013.1 identified by match to protein family HMM PF00005 YP_002756014.1 identified by similarity to GB:AAR34852.1; match to protein family HMM PF04536 YP_002756015.1 identified by match to protein family HMM PF04011 YP_002756016.1 identified by match to protein family HMM PF00665 YP_002756017.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_002756018.1 identified by glimmer; putative YP_002756019.1 identified by glimmer; putative YP_002756021.1 identified by match to protein family HMM PF00535; match to protein family HMM PF01522 YP_002756022.1 identified by glimmer; putative YP_002756023.1 identified by glimmer; putative YP_002756024.1 identified by similarity to SP:P12310; match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF08659 YP_002756025.1 identified by match to protein family HMM PF00723 YP_002756026.1 identified by match to protein family HMM PF01925 YP_002756027.1 identified by similarity to GB:AAM71980.1; match to protein family HMM PF07843 YP_002756028.1 identified by match to protein family HMM TIGR01470 YP_002756029.1 identified by similarity to GB:BAA06530.1; match to protein family HMM PF01077; match to protein family HMM PF03460 YP_002756030.1 identified by glimmer; putative YP_002756031.1 identified by glimmer; putative YP_002756032.1 identified by glimmer; putative YP_002756033.1 identified by glimmer; putative YP_002756034.1 identified by similarity to SP:Q44623; match to protein family HMM PF07690; match to protein family HMM TIGR01272 YP_002756035.1 catalyzes the degradation of histidine to urocanate and ammmonia YP_002756036.1 identified by similarity to GB:CAB71551.1; match to protein family HMM PF00266; match to protein family HMM PF00282; match to protein family HMM PF01212 YP_002756037.1 identified by similarity to GB:AAR34528.1 YP_002756038.1 identified by similarity to GB:AAR34528.1 YP_002756039.1 identified by match to protein family HMM PF04055; match to protein family HMM TIGR03471 YP_002756040.1 identified by match to protein family HMM PF02321 YP_002756041.1 identified by glimmer; putative YP_002756042.1 identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730 YP_002756043.1 identified by glimmer; putative YP_002756044.1 NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis YP_002756045.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690 YP_002756046.1 identified by match to protein family HMM PF00535 YP_002756048.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis YP_002756049.1 identified by match to protein family HMM PF02055; match to protein family HMM TIGR01409 YP_002756050.1 identified by similarity to PIR:S74867; match to protein family HMM PF00578; match to protein family HMM PF08534 YP_002756051.1 identified by match to protein family HMM PF01475 YP_002756052.1 identified by similarity to GB:AAC61301.1; match to protein family HMM PF00578; match to protein family HMM PF08534 YP_002756053.1 identified by match to protein family HMM PF02627; match to protein family HMM TIGR00777; match to protein family HMM TIGR00778 YP_002756054.1 identified by glimmer; putative YP_002756055.1 identified by glimmer; putative YP_002756056.1 identified by glimmer; putative YP_002756057.1 identified by similarity to SP:O34746; match to protein family HMM PF08541; match to protein family HMM PF08545; match to protein family HMM TIGR00747 YP_002756058.1 in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ YP_002756059.1 identified by match to protein family HMM PF01794 YP_002756060.1 identified by glimmer; putative YP_002756061.1 identified by match to protein family HMM PF01058; match to protein family HMM PF08425; match to protein family HMM TIGR00391; match to protein family HMM TIGR01409 YP_002756062.1 identified by match to protein family HMM PF00374 YP_002756063.1 identified by match to protein family HMM PF01292; match to protein family HMM TIGR02125 YP_002756064.1 identified by match to protein family HMM PF01750; match to protein family HMM TIGR00072 YP_002756065.1 identified by similarity to SP:P24189; match to protein family HMM PF01155 YP_002756066.1 identified by similarity to SP:P24190; match to protein family HMM PF02492; match to protein family HMM TIGR00073 YP_002756067.1 identified by similarity to SP:P40595; match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR02124 YP_002756068.1 identified by similarity to SP:P24192; match to protein family HMM PF01924; match to protein family HMM TIGR00075 YP_002756069.1 identified by match to protein family HMM PF01455; match to protein family HMM TIGR00074 YP_002756070.1 identified by similarity to SP:O07451; match to protein family HMM PF00708; match to protein family HMM PF01300; match to protein family HMM PF07503; match to protein family HMM TIGR00143 YP_002756071.1 identified by glimmer; putative YP_002756072.1 identified by match to protein family HMM PF00924 YP_002756073.1 identified by similarity to SP:P43531; match to protein family HMM PF00083; match to protein family HMM PF07690 YP_002756074.1 identified by match to protein family HMM PF05977; match to protein family HMM PF07690 YP_002756075.1 identified by glimmer; putative YP_002756076.1 identified by glimmer; putative YP_002756077.1 identified by match to protein family HMM PF00311 YP_002756078.1 identified by glimmer; putative YP_002756080.1 identified by match to protein family HMM PF00005 YP_002756081.1 identified by glimmer; putative YP_002756082.1 identified by similarity to GB:BAC67912.1 YP_002756083.1 identified by match to protein family HMM PF00440 YP_002756084.1 identified by similarity to GB:CAD73230.1; match to protein family HMM PF07632 YP_002756085.1 identified by similarity to SP:P40713; match to protein family HMM PF00294 YP_002756086.1 identified by match to protein family HMM PF01047 YP_002756087.1 identified by match to protein family HMM PF04264 YP_002756088.1 identified by match to protein family HMM PF02678; match to protein family HMM PF05726 YP_002756089.1 identified by glimmer; putative YP_002756091.1 RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome YP_002756092.1 identified by match to protein family HMM PF01207; match to protein family HMM TIGR00737 YP_002756093.1 identified by glimmer; putative YP_002756094.1 identified by match to protein family HMM PF00702; match to protein family HMM PF01842; match to protein family HMM PF08282; match to protein family HMM TIGR00338; match to protein family HMM TIGR01488 YP_002756095.1 identified by glimmer; putative YP_002756096.1 identified by glimmer; putative YP_002756097.1 identified by match to protein family HMM PF01408; match to protein family HMM PF02894 YP_002756098.1 identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776 YP_002756099.1 identified by glimmer; putative YP_002756100.1 identified by match to protein family HMM PF01188; match to protein family HMM PF02746 YP_002756102.1 identified by similarity to GB:AAS03703.1 YP_002756103.1 identified by match to protein family HMM PF00732 YP_002756104.1 identified by match to protein family HMM PF00912; match to protein family HMM TIGR02070 YP_002756105.1 catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis YP_002756106.1 identified by match to protein family HMM PF00657 YP_002756107.1 identified by match to protein family HMM PF00440 YP_002756108.1 identified by similarity to SP:P41407; match to protein family HMM PF02525 YP_002756109.1 identified by similarity to PIR:E83986 YP_002756110.1 identified by glimmer; putative YP_002756111.1 identified by match to protein family HMM PF00633 YP_002756112.1 identified by match to protein family HMM PF01521; match to protein family HMM TIGR00049 YP_002756113.1 identified by similarity to GB:AAM62417.1 YP_002756114.1 identified by glimmer; putative YP_002756115.1 identified by glimmer; putative YP_002756116.1 identified by match to protein family HMM PF05137 YP_002756118.1 identified by similarity to GB:AAT00614.1; match to protein family HMM PF00437; match to protein family HMM PF05157 YP_002756119.1 identified by similarity to GB:AAT00616.1; match to protein family HMM PF00482 YP_002756120.1 identified by similarity to GB:AAK22487.1 YP_002756121.1 identified by match to protein family HMM PF03548 YP_002756122.1 identified by glimmer; putative YP_002756123.1 identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993 YP_002756124.1 identified by similarity to GB:BAD37614.1 YP_002756125.1 identified by match to protein family HMM PF00037; match to protein family HMM PF08331 YP_002756126.1 identified by similarity to SP:P39158; match to protein family HMM PF00313 YP_002756127.1 identified by match to protein family HMM PF03631; match to protein family HMM TIGR00765 YP_002756128.1 identified by match to protein family HMM PF00672; match to protein family HMM PF07228 YP_002756129.1 identified by match to protein family HMM PF00583 YP_002756130.1 identified by match to protein family HMM PF00665 YP_002756131.1 identified by match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225 YP_002756132.1 identified by similarity to SP:P21202; match to protein family HMM PF00639; match to protein family HMM PF09312 YP_002756133.1 identified by match to protein family HMM PF01336; match to protein family HMM PF01966 YP_002756134.1 identified by similarity to GB:BAD42151.1; match to protein family HMM PF01878 YP_002756135.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis YP_002756136.1 identified by match to protein family HMM PF01327; match to protein family HMM TIGR00079 YP_002756137.1 identified by match to protein family HMM PF00551; match to protein family HMM PF02911; match to protein family HMM TIGR00460 YP_002756138.1 identified by match to protein family HMM PF01029; match to protein family HMM PF01189; match to protein family HMM PF05175 YP_002756139.1 identified by match to protein family HMM PF03793 YP_002756140.1 identified by similarity to GB:CAE12691.1; match to protein family HMM PF02566 YP_002756141.1 identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297 YP_002756142.1 identified by similarity to SP:O86169; match to protein family HMM PF01209; match to protein family HMM PF08241; match to protein family HMM PF08242; match to protein family HMM TIGR01934 YP_002756143.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis YP_002756144.1 identified by match to protein family HMM PF00890; match to protein family HMM PF01266; match to protein family HMM PF02910; match to protein family HMM PF07992; match to protein family HMM TIGR00551 YP_002756145.1 identified by match to protein family HMM PF00857 YP_002756146.1 identified by match to protein family HMM PF02900 YP_002756147.1 identified by glimmer; putative YP_002756148.1 identified by match to protein family HMM PF00593 YP_002756149.1 identified by glimmer; putative YP_002756150.1 identified by match to protein family HMM PF00902; match to protein family HMM TIGR00945 YP_002756151.1 identified by match to protein family HMM PF02416 YP_002756152.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate YP_002756153.1 identified by similarity to GB:AAC62693.1 YP_002756154.1 identified by match to protein family HMM PF02517 YP_002756155.1 identified by similarity to GB:CAD13655.1 YP_002756156.1 identified by similarity to SP:P23930; match to protein family HMM PF00795; match to protein family HMM TIGR00546 YP_002756157.1 identified by glimmer; putative YP_002756159.1 identified by match to protein family HMM PF00753 YP_002756160.1 identified by match to protein family HMM PF04055 YP_002756161.1 identified by match to protein family HMM PF04519 YP_002756162.1 identified by glimmer; putative YP_002756163.1 identified by match to protein family HMM PF00676; match to protein family HMM PF02779; match to protein family HMM PF02780 YP_002756164.1 pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient YP_002756165.1 identified by match to protein family HMM PF00924 YP_002756166.1 identified by match to protein family HMM PF01256; match to protein family HMM PF03853; match to protein family HMM TIGR00196; match to protein family HMM TIGR00197 YP_002756167.1 identified by similarity to GB:AAN53677.1; match to protein family HMM PF02367; match to protein family HMM TIGR00150 YP_002756168.1 identified by similarity to SP:P37105; match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM PF02978; match to protein family HMM TIGR00959 YP_002756169.1 identified by match to protein family HMM PF00589 YP_002756170.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466 YP_002756171.1 identified by glimmer; putative YP_002756172.1 identified by match to protein family HMM PF05101 YP_002756174.1 identified by glimmer; putative YP_002756175.1 identified by match to protein family HMM PF03743 YP_002756176.1 identified by glimmer; putative YP_002756177.1 identified by glimmer; putative YP_002756179.1 identified by glimmer; putative YP_002756180.1 identified by similarity to PIR:AB1882 YP_002756181.1 identified by similarity to GB:CAC80868.1 YP_002756182.1 identified by match to protein family HMM PF00437 YP_002756183.1 identified by glimmer; putative YP_002756184.1 identified by glimmer; putative YP_002756185.1 identified by glimmer; putative YP_002756186.1 identified by similarity to GB:CAH17350.1 YP_002756187.1 identified by match to protein family HMM PF08751; match to protein family HMM TIGR02686 YP_002756188.1 identified by match to protein family HMM PF08870; match to protein family HMM TIGR03184 YP_002756189.1 identified by similarity to GB:BAC70641.1; match to protein family HMM TIGR03185 YP_002756190.1 identified by match to protein family HMM PF01507; match to protein family HMM TIGR03183 YP_002756191.1 identified by similarity to GB:BAC70643.1; match to protein family HMM TIGR03187; match to protein family HMM TIGR03233 YP_002756192.1 identified by match to protein family HMM PF00266; match to protein family HMM TIGR03235 YP_002756193.1 identified by glimmer; putative YP_002756194.1 identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851 YP_002756195.1 identified by glimmer; putative YP_002756196.1 identified by glimmer; putative YP_002756197.1 identified by glimmer; putative YP_002756198.1 identified by match to protein family HMM PF01548; match to protein family HMM PF02371 YP_002756199.1 identified by similarity to GB:AAV44702.1 YP_002756200.1 identified by glimmer; putative YP_002756201.1 identified by match to protein family HMM PF02195; match to protein family HMM TIGR00180 YP_002756202.1 identified by match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594 YP_002756203.1 identified by glimmer; putative YP_002756204.1 identified by glimmer; putative YP_002756205.1 identified by similarity to PIR:AC2205; match to protein family HMM PF02586 YP_002756206.1 identified by glimmer; putative YP_002756207.1 identified by glimmer; putative YP_002756208.1 identified by match to protein family HMM PF05016 YP_002756209.1 identified by similarity to GB:BAC91445.1 YP_002756210.1 identified by glimmer; putative YP_002756211.1 identified by glimmer; putative YP_002756212.1 identified by match to protein family HMM PF02687; match to protein family HMM TIGR03434 YP_002756213.1 identified by similarity to GB:CAD48015.1 YP_002756214.1 identified by similarity to GB:AAK24668.1 YP_002756215.1 identified by match to protein family HMM PF00027 YP_002756216.1 identified by match to protein family HMM PF00144 YP_002756217.1 identified by match to protein family HMM PF03551; match to protein family HMM TIGR03433 YP_002756218.1 identified by match to protein family HMM PF02687; match to protein family HMM TIGR03434 YP_002756219.1 identified by match to protein family HMM PF00078; match to protein family HMM PF08388 YP_002756220.1 identified by glimmer; putative YP_002756221.1 identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937 YP_002756222.1 identified by glimmer; putative YP_002756223.1 identified by glimmer; putative YP_002756224.1 identified by similarity to GB:AAW76458.1; match to protein family HMM PF07715 YP_002756225.1 identified by glimmer; putative YP_002756226.1 identified by glimmer; putative YP_002756227.1 identified by match to protein family HMM PF00733 YP_002756229.1 identified by glimmer; putative YP_002756230.1 identified by glimmer; putative YP_002756231.1 identified by glimmer; putative YP_002756232.1 identified by similarity to GB:BAC90602.1 YP_002756233.1 identified by match to protein family HMM PF07858 YP_002756234.1 identified by glimmer; putative YP_002756235.1 identified by similarity to GB:AAM40363.1 YP_002756236.1 identified by glimmer; putative YP_002756237.1 contains an internal deletion YP_002756238.1 identified by similarity to SP:P15026; match to protein family HMM PF01695 YP_002756239.1 identified by glimmer; putative YP_002756240.1 identified by similarity to GB:CAH17350.1 YP_002756241.1 identified by match to protein family HMM PF08751; match to protein family HMM TIGR02686 YP_002756242.1 identified by match to protein family HMM PF02171 YP_002756243.1 identified by similarity to GB:CAB71852.1 YP_002756244.1 identified by glimmer; putative YP_002756245.1 identified by glimmer; putative YP_002756246.1 identified by match to protein family HMM PF00580 YP_002756247.1 identified by similarity to GB:BAC49897.1 YP_002756248.1 identified by glimmer; putative YP_002756249.1 identified by glimmer; putative YP_002756250.1 identified by glimmer; putative YP_002756251.1 identified by match to protein family HMM PF01695 YP_002756252.1 identified by glimmer; putative YP_002756253.1 identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621 YP_002756254.1 identified by match to protein family HMM PF00437 YP_002756255.1 identified by glimmer; putative YP_002756257.1 identified by glimmer; putative YP_002756258.1 identified by glimmer; putative YP_002756259.1 identified by glimmer; putative YP_002756260.1 identified by match to protein family HMM PF03743 YP_002756261.1 identified by match to protein family HMM PF03524 YP_002756263.1 identified by match to protein family HMM PF05101 YP_002756264.1 identified by glimmer; putative YP_002756265.1 identified by similarity to PIR:AC2550; match to protein family HMM PF06114 YP_002756266.1 identified by match to protein family HMM PF01381 YP_002756267.1 identified by similarity to GB:AAM41384.1 YP_002756268.1 identified by similarity to GB:AAB91579.2 YP_002756269.1 identified by similarity to GB:AAB91581.2 YP_002756270.1 identified by similarity to GB:AAU91253.1 YP_002756271.1 identified by match to protein family HMM PF00376; match to protein family HMM TIGR01764 YP_002756272.1 identified by match to protein family HMM PF00701 YP_002756273.1 identified by match to protein family HMM PF01134; match to protein family HMM PF03486; match to protein family HMM PF04324; match to protein family HMM PF07992 YP_002756274.1 identified by match to protein family HMM PF01266 YP_002756275.1 identified by similarity to GB:CAB71312.1; match to protein family HMM PF05544 YP_002756276.1 identified by glimmer; putative YP_002756277.1 identified by similarity to GB:BAA11872.1; match to protein family HMM PF00326; match to protein family HMM PF00930 YP_002756278.1 identified by match to protein family HMM PF05738 YP_002756279.1 identified by similarity to SP:P11551; match to protein family HMM PF07690; match to protein family HMM TIGR00885 YP_002756280.1 identified by match to protein family HMM PF00107; match to protein family HMM PF08240 YP_002756281.1 identified by match to protein family HMM PF04909 YP_002756282.1 identified by match to protein family HMM PF01120 YP_002756283.1 identified by match to protein family HMM PF01557 YP_002756284.1 identified by match to protein family HMM PF04295; match to protein family HMM PF08666 YP_002756285.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF08659 YP_002756286.1 identified by match to protein family HMM PF00106; match to protein family HMM PF08659 YP_002756287.1 identified by match to protein family HMM PF01590; match to protein family HMM PF03861 YP_002756288.1 identified by match to protein family HMM PF01841; match to protein family HMM PF08379 YP_002756289.1 identified by match to protein family HMM PF04168 YP_002756290.1 identified by similarity to GB:AAK23581.1; match to protein family HMM PF04169; match to protein family HMM PF04174 YP_002756291.1 identified by glimmer; putative YP_002756292.1 identified by match to protein family HMM PF00227 YP_002756293.1 identified by similarity to SP:O34598; match to protein family HMM PF00383 YP_002756294.1 identified by similarity to GB:AAR34528.1 YP_002756295.1 identified by similarity to GB:AAR34528.1 YP_002756296.1 involved in de novo purine biosynthesis YP_002756297.1 identified by match to protein family HMM PF01694 YP_002756298.1 identified by match to protein family HMM PF01381 YP_002756299.1 identified by match to protein family HMM PF01738 YP_002756300.1 identified by glimmer; putative YP_002756302.1 identified by similarity to SP:P25716; match to protein family HMM PF00106; match to protein family HMM PF08659; match to protein family HMM TIGR01830 YP_002756303.1 identified by match to protein family HMM PF06736 YP_002756304.1 identified by similarity to GB:AAU25324.1 YP_002756305.1 identified by similarity to GB:CAF22879.1 YP_002756306.1 identified by match to protein family HMM PF00154; match to protein family HMM TIGR02012 YP_002756307.1 identified by match to protein family HMM PF01467; match to protein family HMM TIGR00125; match to protein family HMM TIGR01510 YP_002756308.1 identified by similarity to SP:P23034; match to protein family HMM PF00155; match to protein family HMM PF00266; match to protein family HMM PF01041; match to protein family HMM PF01053; match to protein family HMM PF01212; match to protein family HMM PF01276 YP_002756309.1 identified by similarity to SP:P77625; match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549 YP_002756310.1 identified by match to protein family HMM PF00903; match to protein family HMM TIGR01263 YP_002756311.1 identified by match to protein family HMM PF01895; match to protein family HMM TIGR02135 YP_002756312.1 identified by match to protein family HMM PF00763; match to protein family HMM PF02882 YP_002756313.1 identified by glimmer; putative YP_002756314.1 identified by match to protein family HMM PF00478; match to protein family HMM PF00571; match to protein family HMM TIGR01302 YP_002756315.1 identified by match to protein family HMM PF02537; match to protein family HMM TIGR00494 YP_002756316.1 identified by match to protein family HMM PF00195; match to protein family HMM PF02797; match to protein family HMM PF08392; match to protein family HMM PF08541 YP_002756317.1 phenylalanine 4-hydroxylase; phenylalanine 4-hydroxylase; catalyzes the formation of 4a-hydroxytetrahydrobiopterin and tyrosine from phenylalanine and tetrahydrobiopterin YP_002756318.1 identified by match to protein family HMM PF01638 YP_002756319.1 identified by match to protein family HMM PF01073; match to protein family HMM PF05368 YP_002756320.1 identified by similarity to GB:BAD49603.1; match to protein family HMM PF08867 YP_002756321.1 identified by similarity to SP:P37967; match to protein family HMM PF00135 YP_002756322.1 identified by similarity to GB:AAT90058.1 YP_002756323.1 identified by glimmer; putative YP_002756324.1 identified by match to protein family HMM PF02576 YP_002756325.1 identified by match to protein family HMM PF00013; match to protein family HMM PF00575; match to protein family HMM PF00633; match to protein family HMM PF07650; match to protein family HMM PF08529; match to protein family HMM TIGR01953 YP_002756326.1 identified by match to protein family HMM PF00009; match to protein family HMM PF03144; match to protein family HMM PF04760; match to protein family HMM TIGR00231; match to protein family HMM TIGR00487 YP_002756327.1 identified by match to protein family HMM PF02401; match to protein family HMM TIGR00216 YP_002756328.1 identified by similarity to SP:P33247; similarity to GB:BAA25185.1; match to protein family HMM PF00432; match to protein family HMM TIGR01507; match to protein family HMM TIGR01787 YP_002756329.1 identified by match to protein family HMM PF04055; match to protein family HMM TIGR03470 YP_002756330.1 identified by glimmer; putative YP_002756331.1 identified by glimmer; putative YP_002756332.1 identified by glimmer; putative YP_002756333.1 identified by similarity to SP:P08821; match to protein family HMM PF00216 YP_002756334.1 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis YP_002756335.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00196 YP_002756336.1 identified by match to protein family HMM PF00809; match to protein family HMM PF02310; match to protein family HMM PF02574; match to protein family HMM PF02607; match to protein family HMM PF02965; match to protein family HMM TIGR02082 YP_002756337.1 identified by match to protein family HMM PF01832 YP_002756338.1 identified by match to protein family HMM PF00590; match to protein family HMM TIGR01469 YP_002756339.1 identified by similarity to GB:BAC06607.1; match to protein family HMM PF00529; match to protein family HMM TIGR01730 YP_002756340.1 identified by match to protein family HMM PF00873 YP_002756341.1 identified by similarity to GB:BAC06609.1; match to protein family HMM PF00873 YP_002756342.1 identified by match to protein family HMM PF02321; match to protein family HMM TIGR01845 YP_002756343.1 identified by match to protein family HMM PF00595; match to protein family HMM PF03572 YP_002756344.1 identified by match to protein family HMM PF00905; match to protein family HMM PF00912; match to protein family HMM TIGR02074 YP_002756345.1 identified by match to protein family HMM PF01757 YP_002756346.1 identified by glimmer; putative YP_002756347.1 identified by match to protein family HMM PF00583 YP_002756348.1 identified by match to protein family HMM PF00462 YP_002756349.1 identified by match to protein family HMM PF01687; match to protein family HMM PF06574; match to protein family HMM TIGR00083 YP_002756350.1 identified by match to protein family HMM PF00753 YP_002756351.1 identified by glimmer; putative YP_002756352.1 identified by match to protein family HMM PF01571; match to protein family HMM PF08669; match to protein family HMM TIGR03317 YP_002756353.1 identified by glimmer; putative YP_002756354.1 identified by match to protein family HMM PF00896; match to protein family HMM TIGR01694 YP_002756355.1 identified by match to protein family HMM PF00294 YP_002756357.1 identified by match to protein family HMM PF02308 YP_002756358.1 identified by match to protein family HMM PF01678; match to protein family HMM TIGR00652 YP_002756359.1 identified by match to protein family HMM PF02016 YP_002756360.1 identified by match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01081 YP_002756361.1 identified by similarity to SP:O35083; similarity to SP:Q42670; match to protein family HMM PF01553 YP_002756362.1 identified by glimmer; putative YP_002756363.1 identified by match to protein family HMM PF05036 YP_002756364.1 identified by match to protein family HMM PF01145 YP_002756365.1 identified by match to protein family HMM PF01957 YP_002756366.1 identified by similarity to GB:CAH04820.1; match to protein family HMM PF00515; match to protein family HMM PF07719 YP_002756368.1 identified by glimmer; putative YP_002756369.1 identified by similarity to OMNI:NTL06SA4863 YP_002756370.1 identified by glimmer; putative YP_002756371.1 identified by match to protein family HMM PF00535 YP_002756372.1 identified by glimmer; putative YP_002756373.1 identified by match to protein family HMM PF02706 YP_002756374.1 identified by match to protein family HMM PF02563 YP_002756375.1 identified by similarity to GB:AAY38254.1 YP_002756376.1 identified by match to protein family HMM PF00535 YP_002756377.1 identified by match to protein family HMM PF04932 YP_002756378.1 identified by match to protein family HMM PF03808; match to protein family HMM TIGR00696 YP_002756380.1 identified by match to protein family HMM PF00534 YP_002756381.1 identified by match to protein family HMM PF00535 YP_002756382.1 identified by match to protein family HMM PF00132 YP_002756383.1 identified by match to protein family HMM PF03069 YP_002756384.1 identified by match to protein family HMM PF00291; match to protein family HMM TIGR00260 YP_002756385.1 identified by match to protein family HMM PF02597 YP_002756386.1 identified by match to protein family HMM PF00155; match to protein family HMM PF00266; match to protein family HMM PF01053; match to protein family HMM PF01212 YP_002756387.1 identified by match to protein family HMM PF01553 YP_002756388.1 identified by similarity to GB:AAS69075.1 YP_002756389.1 identified by glimmer; putative YP_002756390.1 identified by match to protein family HMM PF00692 YP_002756391.1 identified by match to protein family HMM PF07883 YP_002756392.1 identified by match to protein family HMM PF00106; match to protein family HMM PF08659 YP_002756393.1 identified by similarity to GB:CAE42835.1 YP_002756394.1 identified by glimmer; putative YP_002756396.1 identified by match to protein family HMM PF00324 YP_002756397.1 identified by similarity to GB:CAH38561.1 YP_002756398.1 identified by glimmer; putative YP_002756399.1 identified by similarity to SP:Q93PP9; match to protein family HMM PF00210 YP_002756400.1 identified by match to protein family HMM PF00919; match to protein family HMM PF04055; match to protein family HMM TIGR00089; match to protein family HMM TIGR01125 YP_002756401.1 identified by match to protein family HMM PF03884 YP_002756402.1 identified by match to protein family HMM PF04608 YP_002756403.1 identified by similarity to GB:AAP58572.1 YP_002756404.1 identified by match to protein family HMM PF00994; match to protein family HMM PF02464; match to protein family HMM TIGR00199; match to protein family HMM TIGR00200 YP_002756405.1 identified by match to protein family HMM PF02660; match to protein family HMM TIGR00023 YP_002756406.1 identified by match to protein family HMM PF01210; match to protein family HMM PF02558; match to protein family HMM PF03446; match to protein family HMM PF07479 YP_002756407.1 identified by match to protein family HMM PF01966 YP_002756408.1 identified by similarity to SP:P10121; match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM TIGR00064 YP_002756409.1 identified by match to protein family HMM PF00383; match to protein family HMM PF01872; match to protein family HMM TIGR00227; match to protein family HMM TIGR00326 YP_002756410.1 identified by match to protein family HMM PF00677; match to protein family HMM TIGR00187 YP_002756411.1 identified by match to protein family HMM PF00291 YP_002756412.1 identified by similarity to GB:BAD39804.1 YP_002756413.1 identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732 YP_002756414.1 identified by match to protein family HMM PF01131; match to protein family HMM PF01396; match to protein family HMM PF01751; match to protein family HMM TIGR01051 YP_002756415.1 identified by similarity to SP:Q47150; similarity to GB:CAA26250.1; match to protein family HMM PF04221; match to protein family HMM TIGR02384 YP_002756416.1 identified by match to protein family HMM PF05016; match to protein family HMM TIGR02385 YP_002756417.1 identified by glimmer; putative YP_002756418.1 identified by similarity to PIR:S77173; match to protein family HMM PF04248 YP_002756419.1 identified by match to protein family HMM PF00144 YP_002756420.1 identified by match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM TIGR00254 YP_002756421.1 identified by glimmer; putative YP_002756422.1 identified by match to protein family HMM TIGR00305 YP_002756423.1 identified by match to protein family HMM TIGR01552 YP_002756424.1 identified by glimmer; putative YP_002756425.1 identified by similarity to SP:P36906; match to protein family HMM PF01229 YP_002756426.1 identified by match to protein family HMM PF00004; match to protein family HMM PF02190; match to protein family HMM PF05362; match to protein family HMM PF07728; match to protein family HMM TIGR00763 YP_002756427.1 binds and unfolds substrates as part of the ClpXP protease YP_002756428.1 identified by similarity to SP:P19245; match to protein family HMM PF00574; match to protein family HMM TIGR00493 YP_002756429.1 identified by similarity to SP:P80698; match to protein family HMM PF00254; match to protein family HMM PF05697; match to protein family HMM PF05698; match to protein family HMM TIGR00115 YP_002756430.1 identified by match to protein family HMM PF00999 YP_002756431.1 identified by glimmer; putative YP_002756432.1 identified by similarity to SP:P27304; match to protein family HMM PF07690; match to protein family HMM TIGR00711 YP_002756433.1 identified by similarity to SP:P17582; match to protein family HMM PF00484 YP_002756434.1 identified by glimmer; putative YP_002756435.1 identified by match to protein family HMM PF00144 YP_002756436.1 identified by match to protein family HMM PF01022 YP_002756437.1 identified by similarity to SP:P45947; match to protein family HMM PF01451 YP_002756438.1 identified by match to protein family HMM PF01758; match to protein family HMM TIGR00832 YP_002756439.1 identified by match to protein family HMM PF02366 YP_002756440.1 identified by similarity to GB:BAD56493.1 YP_002756441.1 identified by match to protein family HMM PF02541; match to protein family HMM TIGR03706 YP_002756442.1 identified by match to protein family HMM PF00300; match to protein family HMM TIGR00249 YP_002756443.1 identified by match to protein family HMM PF00578; match to protein family HMM PF08534 YP_002756444.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate YP_002756445.1 identified by glimmer; putative YP_002756446.1 identified by match to protein family HMM PF02321 YP_002756447.1 identified by match to protein family HMM PF00529 YP_002756449.1 identified by glimmer; putative YP_002756450.1 identified by match to protein family HMM PF01977; match to protein family HMM TIGR00148; match to protein family HMM TIGR03701 YP_002756451.1 identified by match to protein family HMM PF00037; match to protein family HMM TIGR01971 YP_002756452.1 identified by similarity to PIR:C82791; match to protein family HMM PF04366 YP_002756453.1 identified by match to protein family HMM PF03279 YP_002756454.1 identified by match to protein family HMM PF00132; match to protein family HMM PF04613; match to protein family HMM TIGR01853 YP_002756455.1 identified by glimmer; putative YP_002756456.1 identified by match to protein family HMM PF02525 YP_002756457.1 identified by match to protein family HMM PF00027; match to protein family HMM PF02518 YP_002756458.1 identified by glimmer; putative YP_002756459.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis YP_002756460.1 identified by match to protein family HMM PF01842; match to protein family HMM TIGR00119 YP_002756461.1 identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; match to protein family HMM TIGR00118 YP_002756462.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis YP_002756463.1 identified by match to protein family HMM PF00694; match to protein family HMM TIGR00171 YP_002756464.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate YP_002756465.1 identified by match to protein family HMM PF00180; match to protein family HMM TIGR00169 YP_002756466.1 identified by similarity to SP:Q8RL85; match to protein family HMM PF00682 YP_002756467.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466 YP_002756468.1 identified by glimmer; putative YP_002756469.1 identified by glimmer; putative YP_002756470.1 identified by glimmer; putative YP_002756471.1 identified by match to protein family HMM TIGR01352 YP_002756472.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR01179 YP_002756473.1 identified by similarity to GB:AAN55916.1 YP_002756474.1 identified by match to protein family HMM PF00488 YP_002756475.1 identified by match to protein family HMM PF00294; match to protein family HMM TIGR02152 YP_002756476.1 identified by match to protein family HMM PF01791; match to protein family HMM TIGR00126 YP_002756477.1 identified by match to protein family HMM PF00171 YP_002756478.1 identified by similarity to SP:P10443; match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594 YP_002756479.1 identified by glimmer; putative YP_002756480.1 identified by match to protein family HMM PF04264 YP_002756481.1 identified by match to protein family HMM PF00515; match to protein family HMM PF01433 YP_002756482.1 identified by match to protein family HMM PF02684; match to protein family HMM TIGR00215 YP_002756483.1 identified by similarity to SP:P45798; match to protein family HMM PF00722 YP_002756484.1 identified by match to protein family HMM PF00005; match to protein family HMM PF00664 YP_002756485.1 identified by match to protein family HMM PF04055; match to protein family HMM PF06969; match to protein family HMM TIGR00539 YP_002756486.1 identified by glimmer; putative YP_002756487.1 identified by similarity to SP:P42327; match to protein family HMM PF00107; match to protein family HMM PF08240 YP_002756488.1 identified by match to protein family HMM PF02321 YP_002756489.1 identified by similarity to SP:P77239; match to protein family HMM PF00529; match to protein family HMM TIGR01730 YP_002756490.1 identified by similarity to SP:P38054; match to protein family HMM PF00873; match to protein family HMM TIGR00914 YP_002756492.1 identified by match to protein family HMM PF05089 YP_002756493.1 identified by match to protein family HMM PF00593 YP_002756494.1 identified by glimmer; putative YP_002756495.1 identified by glimmer; putative YP_002756496.1 identified by glimmer; putative YP_002756497.1 identified by glimmer; putative YP_002756498.1 identified by similarity to GB:BAB49204.1 YP_002756499.1 identified by match to protein family HMM PF02735; match to protein family HMM TIGR02772 YP_002756500.1 identified by match to protein family HMM PF01068; match to protein family HMM PF01896; match to protein family HMM PF04679; match to protein family HMM TIGR02776; match to protein family HMM TIGR02777; match to protein family HMM TIGR02778; match to protein family HMM TIGR02779 YP_002756501.1 identified by glimmer; putative YP_002756502.1 identified by glimmer; putative YP_002756503.1 identified by glimmer; putative YP_002756504.1 identified by glimmer; putative YP_002756505.1 identified by match to protein family HMM PF00144 YP_002756506.1 identified by glimmer; putative YP_002756507.1 identified by match to protein family HMM PF02687; match to protein family HMM TIGR03434 YP_002756508.1 identified by match to protein family HMM PF03551; match to protein family HMM TIGR03433 YP_002756509.1 identified by glimmer; putative YP_002756510.1 identified by similarity to SP:P27028; similarity to SP:Q06903; match to protein family HMM PF00326; match to protein family HMM PF02897 YP_002756511.1 identified by match to protein family HMM PF00155; match to protein family HMM PF00392 YP_002756512.1 identified by match to protein family HMM PF00324 YP_002756513.1 identified by match to protein family HMM PF04299 YP_002756514.1 identified by match to protein family HMM PF00593; match to protein family HMM PF07715; match to protein family HMM TIGR01783 YP_002756515.1 identified by match to protein family HMM PF01979; match to protein family HMM PF07969 YP_002756516.1 identified by match to protein family HMM PF03929 YP_002756517.1 identified by similarity to GB:BAC92278.1 YP_002756518.1 identified by similarity to GB:BAC48278.1 YP_002756519.1 identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937 YP_002756520.1 identified by match to protein family HMM PF00202; match to protein family HMM PF01041; match to protein family HMM PF01053; match to protein family HMM PF01212 YP_002756521.1 identified by glimmer; putative YP_002756522.1 identified by glimmer; putative YP_002756523.1 identified by glimmer; putative YP_002756524.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00196; match to protein family HMM PF08281 YP_002756525.1 identified by match to protein family HMM PF01336; match to protein family HMM PF02518; match to protein family HMM PF07730 YP_002756526.1 identified by match to protein family HMM PF00532 YP_002756527.1 identified by match to protein family HMM PF05738 YP_002756528.1 identified by match to protein family HMM PF00515; match to protein family HMM PF07719 YP_002756529.1 identified by similarity to GB:BAB80505.1 YP_002756530.1 identified by match to protein family HMM PF01546; match to protein family HMM PF07687 YP_002756531.1 identified by match to protein family HMM TIGR02293 YP_002756532.1 identified by similarity to GB:CAI09968.1; match to protein family HMM PF08808 YP_002756534.1 identified by match to protein family HMM PF00005 YP_002756535.1 identified by similarity to GB:CAH22417.1