-- dump date 20140618_185139 -- class Genbank::Gene -- table gene_note -- id note 7698928 Cellulose synthase operon protein C precursor, putative; this gene contains a frame shift which may be the result of a sequencing error; identified by match to protein family HMM PF00515; match to protein family HMM PF05420 7700994 copper-exporting ATPase; this gene contains a frame shift which may be the result of a sequencing error; identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525 7698383 acetyltransferase, GNAT family; this gene contains a premature stop which may be the result of a sequencing error; identified by match to protein family HMM PF00583 7699408 alginate regulatory protein P; (put.); putative; this gene contains a premature stop which may be the result of a sequencing error 7699421 hypothetical protein; this gene contains a premature stop which may be the result of a sequencing error; identified by glimmer; putative 7697862 two component osmosensitive K+channel and sensor histidine kinase, KdpD; this gene contains a frame shift which may be the result of a sequencing error; identified by match to protein family HMM PF00512; match to protein family HMM PF02518 7699802 hypothetical protein; this region contains one or more premature stops and/or frameshifts;identified by glimmer; putative 7701009 BNR/Asp-box repeat protein; this gene contains a frame shift which may be the result of a sequencing error; identified by match to protein family HMM PF02012 7699846 conserved hypothetical protein, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error 7698104 oligopeptide ABC transporter, permease protein - frameshift; this gene contains a frame shift which may be the result of a sequencing error; identified by match to protein family HMM PF00528 7699903 group II intron-encoded maturase, authentic point mutation; this gene contains a premature stop which is not the result of sequencing error; identified by similarity to GB:AAN70021.1 7698821 TraD protein, degenerate; this region contains one or more premature stops and/or frameshifts; identified by similarity to SP:P09130 7698787 group II intron-encoded maturase, degenerate; this region contains one or more premature stops and/or frameshifts 7700544 transcriptional regulator, LysR family, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error; identified by similarity to GB:AAU48672.1; match to protein family HMM PF00126 7698929 putative 6-pyruvoyl tetrahydropterin synthase, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF01242 7698884 mucin, putative; this region contains one or more premature stops and/or frameshifts 7700033 polyketide synthase; this gene contains a frame shift which may be the result of a sequencing error; identified by match to protein family HMM PF00109; match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF02801 7699590 CurI; this gene contains a frame shift which may be the result of a sequencing error; identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF08659 7701047 Surfactin synthetase subunit 2.; this gene contains a frame shift which may be the result of a sequencing error; identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM TIGR01720; match to protein family HMM TIGR01733 7697972 nonribosomal peptide synthetase; this gene contains a frame shift which may be the result of a sequencing error; identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM TIGR01720; match to protein family HMM TIGR01733 7698603 mercury(II) reductase; this gene contains a frame shift which may be the result of a sequencing error; identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992; match to protein family HMM TIGR02053 7701210 sensor histidine kinase with multiple PAS and a response regulator receiver domain, putative; this gene contains a frame shift which may be the result of a sequencing error; identified by match to protein family HMM PF00512; match to protein family HMM PF02518 7698471 transcription regulator, TetR family, putative; this gene contains a frame shift which may be the result of a sequencing error; identified by match to protein family HMM PF00440 7700456 Integrase, catalytic core; this gene contains a frame shift which may be the result of a sequencing error; identified by match to protein family HMM PF00665 7700951 TonB-like protein, putative; this gene contains a premature stop which may be the result of a sequencing error 7699755 IS5 family transposase, degenerate; this region contains one or more premature stops and/or frameshifts 7699383 conserved domain protein; this gene contains a premature stop which may be the result of a sequencing error 7698409 two-component hybrid sensor and regulator; this gene contains a frame shift which may be the result of a sequencing error; identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229 7699364 two-component response regulator; this gene contains a premature stop which may be the result of a sequencing error; identified by match to protein family HMM PF01627 7697857 RNA polymerase sigma-70 factor, ECF family protein; this gene contains a premature stop which may be the result of a sequencing error; identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; sigma-W 7700183 transcriptional regulator, Cro/CI family; this gene contains a frame shift which may be the result of a sequencing error 7698750 TonB family C-terminal domain protein; this gene contains a premature stop which may be the result of a sequencing error; identified by match to protein family HMM TIGR01352 7699920 putative lipoprotein; this region contains one or more premature stops and/or frameshifts 7699460 tRNA(Ile)-lysidine synthetase; this gene contains a frame shift which may be the result of a sequencing error; identified by match to protein family HMM PF01171; match to protein family HMM TIGR02432; match to protein family HMM TIGR02433 7700386 hypothetical protein; this gene contains a premature stop which may be the result of a sequencing error; identified by glimmer; putative 7699152 hypothetical protein; this gene contains a frame shift which may be the result of a sequencing error; identified by glimmer; putative 7699410 toxRS operon; this gene contains a frame shift which may be the result of a sequencing error; identified by match to protein family HMM PF00486 7700978 response regulator; this gene contains a frame shift which may be the result of a sequencing error; identified by match to protein family HMM PF00072 7699582 putative addiction module antidote protein; this gene contains a frame shift which may be the result of a sequencing error; identified by match to protein family HMM TIGR02684 7700716 group II intron-encoded maturase, authentic point mutation; this gene contains a premature stop which is not the result of sequencing error; identified by similarity to GB:AAN70021.1 7701164 ISAca2, transposase istA, authentic point mutation; this gene contains a premature stop which is not the result of sequencing error; identified by match to protein family HMM PF00665 7699089 hypothetical protein; this gene contains a frame shift which may be the result of a sequencing error; identified by glimmer; putative 7700328 sensory transduction protein kinase; this gene contains a frame shift which may be the result of a sequencing error; identified by match to protein family HMM PF02518 7698837 acetyltransferase, GNAT family; this gene contains a premature stop which may be the result of a sequencing error; identified by match to protein family HMM PF00583 7700193 permease , putative; this gene contains a frame shift which may be the result of a sequencing error 7701172 conserved domain protein, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error; identified by similarity to GB:AAT04031.1 7697891 single-strand binding protein family, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error; identified by similarity to SP:P28043; match to protein family HMM PF00436; match to protein family HMM TIGR00621 7698774 conserved hypothetical protein, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error; identified by similarity to GB:BAC47192.1 7699715 ISAca2, transposase istA, authentic point mutation; this gene contains a premature stop which is not the result of sequencing error; identified by match to protein family HMM PF00665 7700611 group II intron-encoded maturase, authentic point mutation; this gene contains a premature stop which is not the result of sequencing error; identified by similarity to GB:AAN70021.1 7698341 ISAca2, transposase istA, authentic point mutation; this gene contains a premature stop which is not the result of sequencing error; identified by match to protein family HMM PF00665 7699996 putative peptide ABC transporter permease protein; this gene contains a premature stop which may be the result of a sequencing error 7701143 transcription regulator, LacI family; this gene contains a frame shift which may be the result of a sequencing error; identified by match to protein family HMM PF00532 7700013 putative acetyltransferase, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error; identified by similarity to GB:CAE50776.1 7699991 putative MarR-family regulatory protein; this gene contains a frame shift which may be the result of a sequencing error; identified by match to protein family HMM PF01047 7700743 RNA polymerase sigma-70 factor, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error 7698145 peptidase, S9A family; this gene contains a premature stop which may be the result of a sequencing error; identified by match to protein family HMM PF00326; match to protein family HMM PF02897 7701048 tetratricopeptide repeat/transglycosylase SLT domain protein; this gene contains a frame shift which may be the result of a sequencing error; identified by match to protein family HMM PF00515; match to protein family HMM PF01464; match to protein family HMM PF07719