-- dump date   	20140618_185434
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
YP_968393.1	binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.
YP_968394.1	KEGG: rfr:Rfer_0002 DNA polymerase III, beta subunit; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III, beta chain
YP_968395.1	KEGG: pol:Bpro_0003 DNA gyrase, B subunit; TIGRFAM: DNA gyrase, B subunit; PFAM: DNA gyrase, subunit B domain protein; ATP-binding region, ATPase domain protein; TOPRIM domain protein; DNA topoisomerase, type IIA, subunit B, region 2 domain protein; SMART: DNA topoisomerase II
YP_968396.1	PFAM: AAA-4 family protein; KEGG: pca:Pcar_2730 putative transcriptional regulator
YP_968397.1	KEGG: ava:Ava_3273 putative type I restriction enzyme, R subunit
YP_968398.1	PFAM: DNA polymerase, beta domain protein region; KEGG: lpp:plpp0094 hypothetical protein
YP_968399.1	PFAM: protein of unknown function UPF0153; KEGG: shm:Shewmr7_3669 protein of unknown function UPF0153
YP_968400.1	PFAM: OsmC family protein; KEGG: rru:Rru_A0580 OsmC-like protein
YP_968401.1	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: rfr:Rfer_4119 4Fe-4S ferredoxin, iron-sulfur binding
YP_968402.1	catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine
YP_968403.1	KEGG: pol:Bpro_0143 hypothetical protein
YP_968404.1	helicase involved in DNA repair and perhaps also replication
YP_968405.1	KEGG: mxa:MXAN_0453 putative general stress protein 26
YP_968406.1	KEGG: rfr:Rfer_0182 hypothetical protein
YP_968407.1	KEGG: pol:Bpro_0009 DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease
YP_968408.1	PFAM: regulatory protein GntR, HTH; aminotransferase, class I and II; KEGG: sma:SAV7000 GntR-family transcriptional regulator
YP_968409.1	KEGG: rso:RS03064 hypothetical protein
YP_968410.1	KEGG: reu:Reut_A1687 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain
YP_968411.1	PFAM: NLP/P60 protein; KEGG: rfr:Rfer_0741 NLP/P60
YP_968412.1	catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, tyrosine sensitive
YP_968413.1	KEGG: tbd:Tbd_1042 putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_968414.1	KEGG: bxe:Bxe_A1159 hypothetical protein
YP_968415.1	KEGG: pol:Bpro_0029 hypothetical protein
YP_968416.1	Required for efficient pilin antigenic variation
YP_968417.1	PFAM: nucleoside recognition domain protein; KEGG: rme:Rmet_3343 nucleoside recognition
YP_968418.1	KEGG: xcv:XCV3258 putative secreted protein
YP_968419.1	KEGG: rfr:Rfer_3825 hypothetical protein
YP_968420.1	KEGG: xcv:XCV1504 putative secreted protein
YP_968421.1	KEGG: stt:t2586 hypothetical protein
YP_968422.1	catalyzes the formation of beta-ketovaleryl-CoA from acetyl-CoA and propionyl-CoA
YP_968423.1	TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: regulatory protein, MerR; KEGG: pol:Bpro_4873 transcriptional regulator, MerR family
YP_968424.1	PFAM: Heavy metal transport/detoxification protein; KEGG: bxe:Bxe_A3162 heavy metal binding protein
YP_968425.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: rfr:Rfer_0024 heavy metal translocating P-type ATPase
YP_968426.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rfr:Rfer_2354 methyl-accepting chemotaxis sensory transducer
YP_968428.1	PFAM: Peptidoglycan-binding LysM; KEGG: ecs:ECs0214 hypothetical protein
YP_968429.1	TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: reu:Reut_B3503 heavy metal efflux pump CzcA
YP_968430.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rme:Rmet_3837 secretion protein HlyD
YP_968431.1	PFAM: outer membrane efflux protein; KEGG: dar:Daro_1877 outer membrane efflux protein
YP_968432.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: csa:Csal_0727 two component transcriptional regulator, winged helix family
YP_968433.1	PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; Two-component sensor kinase N-terminal domain protein; KEGG: bte:BTH_I0641 sensor histidine kinase
YP_968434.1	PFAM: NIPSNAP family containing protein; KEGG: bur:Bcep18194_B0447 protein of unknown function DUF1099
YP_968435.1	PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: bxe:Bxe_C0086 ABC taurine transporter, ATPase subunit
YP_968436.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_A4207 ABC taurine transporter, inner membrane subunit
YP_968437.1	PFAM: glutathione S-transferase, N-terminal domain; glutathione S-transferase, C-terminal domain; KEGG: rfr:Rfer_0047 glutathione S-transferase-like
YP_968438.1	PFAM: protein of unknown function UPF0153; KEGG: mca:MCA0686 hypothetical protein
YP_968439.1	PFAM: NADPH-dependent FMN reductase; KEGG: pol:Bpro_0072 NADPH-dependent FMN reductase
YP_968440.1	GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs
YP_968441.1	glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA
YP_968442.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pol:Bpro_0075 lysine exporter protein (LysE/YggA)
YP_968443.1	PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: pol:Bpro_0076 cobyrinic acid a,c-diamide synthase
YP_968444.1	PFAM: protein of unknown function DUF1234; KEGG: pol:Bpro_0077 protein of unknown function DUF1234
YP_968445.1	TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: pol:Bpro_0078 ParB-like partition protein
YP_968446.1	KEGG: xac:XAC3588 integral membrane protein
YP_968447.1	PFAM: GtrA family protein; KEGG: rso:RSc0167 hypothetical protein
YP_968448.1	PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: dar:Daro_1705 hypothetical protein
YP_968449.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: bxe:Bxe_A3788 putative transmembrane oxidoreductase protein
YP_968450.1	KEGG: dar:Daro_1707 hypothetical protein
YP_968451.1	PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: dar:Daro_1708 short-chain dehydrogenase/reductase SDR
YP_968452.1	PFAM: FAD linked oxidase domain protein; KEGG: dar:Daro_1709 FAD linked oxidase, N-terminal
YP_968453.1	PFAM: UbiA prenyltransferase; KEGG: dar:Daro_1710 UbiA prenyltransferase:PepSY-associated TM helix
YP_968454.1	KEGG: rfr:Rfer_0054 methyltransferase type 12
YP_968455.1	PFAM: Peptidoglycan-binding domain 1 protein; KEGG: mfa:Mfla_1720 hypothetical protein
YP_968456.1	PFAM: Carboxylesterase, type B; KEGG: ddi:DDB0183832 hypothetical protein
YP_968457.1	TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: pol:Bpro_2779 precorrin-4 C11-methyltransferase
YP_968458.1	PFAM: Precorrin-8X methylmutase CbiC/CobH; KEGG: pol:Bpro_2777 precorrin-8X methylmutase CbiC/CobH
YP_968459.1	Catalyzes the methylation of C-1 in cobalt-precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A
YP_968460.1	KEGG: pol:Bpro_2775 precorrin-6y C5,15-methyltransferase, subunit CbiE; TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Methyltransferase type 11; Methyltransferase type 12
YP_968461.1	TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: pol:Bpro_2774 precorrin-2 C20-methyltransferase
YP_968462.1	PFAM: cobalamin (vitamin B12) biosynthesis CbiG protein; KEGG: pol:Bpro_2773 cobalamin (vitamin B12) biosynthesis CbiG protein
YP_968463.1	PFAM: cobalamin (vitamin B12) biosynthesis CbiG protein; KEGG: dar:Daro_1686 cobalamin (vitamin B12) biosynthesis CbiG protein
YP_968464.1	KEGG: bja:blr3274 hypothetical protein
YP_968465.1	TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: pol:Bpro_2767 precorrin-3B C17-methyltransferase
YP_968466.1	KEGG: pol:Bpro_2766 hypothetical protein
YP_968468.1	KEGG: tbd:Tbd_0165 hypothetical protein
YP_968469.1	KEGG: rfr:Rfer_1051 hypothetical protein
YP_968470.1	PFAM: helix-turn-helix- domain containing protein, AraC type; AraC protein, arabinose-binding/dimerisation; KEGG: bte:BTH_I1991 transcriptional regulator, AraC family
YP_968471.1	PFAM: major facilitator superfamily MFS_1; KEGG: rfr:Rfer_1946 major facilitator superfamily MFS_1
YP_968473.1	TIGRFAM: cysteine protease domain, YopT-type; KEGG: bja:blr2140 hypothetical protein
YP_968474.1	KEGG: bmb:BruAb2_0840 HdeA
YP_968475.1	KEGG: eca:ECA2169 hypothetical protein
YP_968476.1	PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: sme:SMc01203 hypothetical protein
YP_968478.1	PFAM: protein of unknown function DUF1294; KEGG: dps:DP2067 hypothetical protein
YP_968479.1	PFAM: transposase, IS4 family protein; KEGG: bxe:Bxe_C0489 putative transposase IS4
YP_968480.1	PFAM: transposase, IS4 family protein; KEGG: cvi:CV0957 TIS1421-transposase protein B
YP_968481.1	PFAM: YCII-related; KEGG: bbr:BB0411 hypothetical protein
YP_968482.1	PFAM: FAD linked oxidase domain protein; KEGG: pol:Bpro_0111 FAD linked oxidase-like
YP_968484.1	PFAM: Calcium-binding EF-hand-containing protein; KEGG: pol:Bpro_0112 acid shock protein-like
YP_968485.1	TIGRFAM: ATP--cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: pol:Bpro_0113 ATP--cobalamin adenosyltransferase
YP_968486.1	TIGRFAM: uncharacterized domain 1; PFAM: thioesterase superfamily protein; KEGG: rfr:Rfer_0061 phenylacetic acid degradation-related protein
YP_968487.1	PFAM: acetyl-CoA hydrolase/transferase; KEGG: rpb:RPB_0503 acetyl-CoA hydrolase
YP_968488.1	KEGG: dar:Daro_1795 hypothetical protein
YP_968489.1	TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: pol:Bpro_0117 uracil-xanthine permease
YP_968490.1	KEGG: pol:Bpro_0115 hypothetical protein
YP_968491.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rfr:Rfer_2225 methyl-accepting chemotaxis sensory transducer
YP_968492.1	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: eba:ebA5328 conserved hypothetical protein, predicted radical-SAM emzyme
YP_968493.1	KEGG: mfa:Mfla_2479 putative carbonic anhydrase, family 3
YP_968494.1	KEGG: mlo:mll2220 hypothetical protein
YP_968495.1	PFAM: regulatory protein, TetR; KEGG: xcb:XC_0243 transcriptional regulator TetR family
YP_968496.1	KEGG: rso:RS05497 hypothetical protein
YP_968497.1	PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: rme:Rmet_3186 ABC transporter-related protein
YP_968498.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rme:Rmet_3185 binding-protein-dependent transport systems inner membrane component
YP_968499.1	TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase, FAD-binding; KEGG: xcc:XCC2647 hypothetical protein
YP_968500.1	KEGG: xom:XOO_2877 hypothetical protein
YP_968501.1	PFAM: aldehyde dehydrogenase; KEGG: pol:Bpro_2298 aldehyde dehydrogenase
YP_968502.1	PFAM: regulatory protein, IclR; SMP-30/Gluconolaconase/LRE domain protein; KEGG: sme:SMa0717 putative calcium binding transcriptional regulatory protein
YP_968503.1	PFAM: peptidase M48, Ste24p; KEGG: bcn:Bcen_2142 peptidase M48, Ste24p
YP_968505.1	AcsA; in Sinorhizobium meliloti this enzyme is required for acetoacetate activation; similar to acetyl-CoA synthase
YP_968506.1	TIGRFAM: arginase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: rfr:Rfer_3884 arginase
YP_968507.1	catalyzes the formation of L-proline from L-ornithine
YP_968508.1	PFAM: regulatory protein, AsnC/Lrp family; Helix-turn-helix, type 11 domain protein; KEGG: pol:Bpro_0400 transcriptional regulator, AsnC family
YP_968509.1	TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: rfr:Rfer_2496 CDP-diacylglycerol--serine O-phosphatidyltransferase
YP_968510.1	TIGRFAM: septum site-determining protein MinC; PFAM: Septum formation inhibitor MinC; KEGG: rfr:Rfer_0036 septum site-determining protein MinC
YP_968511.1	TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: rfr:Rfer_0035 septum site-determining protein MinD
YP_968512.1	works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell
YP_968513.1	PFAM: flavin reductase domain protein, FMN-binding; KEGG: pol:Bpro_0126 flavin reductase-like, FMN-binding
YP_968514.1	PFAM: alpha/beta hydrolase fold; KEGG: bja:blr6083 putative hydrolase
YP_968515.1	SMART: peptidase M14, carboxypeptidase A; KEGG: tcx:Tcr_1751 peptidase M14, carboxypeptidase A
YP_968516.1	PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: dar:Daro_1812 NAD(P)H dehydrogenase (quinone):NADPH-dependent FMN reductase
YP_968517.1	PFAM: FAD dependent oxidoreductase; KEGG: pol:Bpro_0148 D-amino-acid dehydrogenase
YP_968518.1	specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport
YP_968519.1	PFAM: regulatory protein, TetR; KEGG: pol:Bpro_0153 transcriptional regulator, TetR family
YP_968520.1	PFAM: UspA domain protein; KEGG: rfr:Rfer_0401 UspA
YP_968521.1	PFAM: metallophosphoesterase; KEGG: pol:Bpro_0155 metallophosphoesterase
YP_968522.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: pol:Bpro_0158 transcriptional regulator, LysR family
YP_968523.1	KEGG: pol:Bpro_0159 hypothetical protein
YP_968524.1	catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP
YP_968525.1	TIGRFAM: exsB protein; PFAM: ExsB family protein; KEGG: bcn:Bcen_2505 ExsB
YP_968526.1	KEGG: rfr:Rfer_0345 hypothetical protein
YP_968527.1	involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans
YP_968528.1	catalyzes the formation of 2-oxobutanoate from L-threonine
YP_968529.1	KEGG: xom:XOO_2877 hypothetical protein
YP_968530.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: bcn:Bcen_2938 acyl-CoA dehydrogenase-like
YP_968531.1	PFAM: regulatory protein, MarR; regulatory protein, LysR; LysR, substrate-binding; KEGG: reu:Reut_B5865 regulatory protein, LysR:LysR, substrate-binding
YP_968532.1	TIGRFAM: gentisate 1,2-dioxygenase; PFAM: Cupin 2, conserved barrel domain protein; KEGG: reu:Reut_B5864 gentisate 1,2-dioxygenase
YP_968533.1	PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bur:Bcep18194_B1888 fumarylacetoacetate (FAA) hydrolase
YP_968534.1	TIGRFAM: maleylacetoacetate isomerase; PFAM: glutathione S-transferase, N-terminal domain; KEGG: rso:RSc1085 putative gst-related protein
YP_968535.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bcn:Bcen_4217 major facilitator superfamily MFS_1
YP_968536.1	PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: rme:Rmet_4320 transcriptional regulator, AraC family
YP_968537.1	PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: bur:Bcep18194_B2555 ornithine cyclodeaminase
YP_968538.1	PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: bja:bll7236 putative threonine synthase
YP_968539.1	PFAM: YheO domain protein; KEGG: bps:BPSS2061 hypothetical protein
YP_968540.1	PFAM: alpha/beta hydrolase fold; KEGG: aci:ACIAD1426 salicylate esterase
YP_968541.1	PFAM: OmpW family protein; KEGG: mlo:mll6127 outer membrane protein
YP_968542.1	TIGRFAM: DNA binding domain, excisionase family; KEGG: noc:Noc_0665 excisionase/Xis, DNA-binding
YP_968543.1	PFAM: helicase domain protein; SMART: DEAD-like helicases-like; KEGG: cte:CT0906 DNA-dependent ATPase, SNF2 family protein
YP_968544.1	KEGG: cte:CT0907 hypothetical protein
YP_968545.1	PFAM: DNA methylase N-4/N-6 domain protein; KEGG: bpm:BURPS1710b_0259 type III DNA modification methyltransferase
YP_968546.1	KEGG: neu:NE1363 hypothetical protein
YP_968547.1	PFAM: Appr-1-p processing domain protein; KEGG: neu:NE1364 Appr-1-p processing enzyme family
YP_968548.1	PFAM: type III restriction enzyme, res subunit; KEGG: cte:CT0911 type III restriction system endonuclease
YP_968549.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: pol:Bpro_0979 transcriptional regulator, LysR family
YP_968550.1	PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: pol:Bpro_0980 oxidoreductase FAD-binding region
YP_968551.1	PFAM: ring hydroxylating dioxygenase, alpha subunit; Rieske [2Fe-2S] domain protein; KEGG: pol:Bpro_0983 Rieske (2Fe-2S) region
YP_968552.1	PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: pol:Bpro_0984 aromatic-ring-hydroxylating dioxygenase, beta subunit
YP_968553.1	PFAM: Rieske [2Fe-2S] domain protein; KEGG: reu:Reut_B4721 Rieske (2Fe-2S) region
YP_968554.1	PFAM: chemotaxis sensory transducer; KEGG: reu:Reut_B3725 chemotaxis sensory transducer
YP_968555.1	PFAM: major facilitator superfamily MFS_1; KEGG: psb:Psyr_2232 major facilitator superfamily
YP_968557.1	KEGG: xcv:XCV0233 putative secreted protein
YP_968558.1	PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: xac:XAC0226 two-component system regulatory protein
YP_968559.1	PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; KEGG: xom:XOO_3970 two-component system sensor protein
YP_968560.1	PFAM: homocysteine S-methyltransferase; KEGG: pol:Bpro_0172 5-methyltetrahydrofolate--homocysteine S-methyltransferase
YP_968561.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bbr:BB1096 LysR-family transcriptional regulator
YP_968562.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: bbr:BB3131 probable acyl-CoA dehydrogenase
YP_968563.1	PFAM: protein of unknown function DUF861, cupin_3; Cupin 2, conserved barrel domain protein; KEGG: rme:Rmet_4456 cupin 2, conserved barrel
YP_968564.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bbr:BB4256 hypothetical protein
YP_968565.1	PFAM: Integrase, catalytic region; KEGG: bpa:BPP1897 IS1002 transposase
YP_968566.1	PFAM: uncharacterized protein UPF0065; KEGG: reu:Reut_B4520 hypothetical protein
YP_968567.1	KEGG: rfr:Rfer_0459 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like
YP_968568.1	PFAM: beta-lactamase; KEGG: sal:Sala_0174 beta-lactamase
YP_968569.1	PFAM: beta-lactamase; KEGG: gvi:gll0595 probable beta-lactamase
YP_968570.1	KEGG: pol:Bpro_2305 hypothetical protein
YP_968571.1	SMART: DEXDc2; helicase c2; KEGG: pfo:Pfl_2690 DEAD_2
YP_968573.1	KEGG: cjk:jk0177 putative Fe-S oxidoreductase
YP_968574.1	PFAM: Glu/Leu/Phe/Val dehydrogenase, C terminal; Glu/Leu/Phe/Val dehydrogenase, dimerisation region; KEGG: pol:Bpro_3239 Glu/Leu/Phe/Val dehydrogenase, C terminal
YP_968576.1	PFAM: protein of unknown function DUF344; KEGG: pol:Bpro_4050 protein of unknown function DUF344
YP_968577.1	PFAM: Amidase; KEGG: bja:blr7282 putative amidase AmiC
YP_968578.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: mfa:Mfla_2387 TonB-dependent siderophore receptor
YP_968579.1	KEGG: ypn:YPN_1485 hypothetical protein
YP_968581.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: mfa:Mfla_0402 transcriptional regulator, LysR family
YP_968582.1	PFAM: transmembrane pair domain protein; KEGG: bte:BTH_II1937 hypothetical protein
YP_968583.1	KEGG: bxe:Bxe_B0621 hypothetical protein
YP_968584.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rme:Rmet_5606 transcriptional regulator, LysR family
YP_968585.1	TIGRFAM: muconate and chloromuconate cycloisomerases; PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein; Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; KEGG: bur:Bcep18194_C7044 mandelate racemase/muconate lactonizing enzyme
YP_968586.1	PFAM: uncharacterized protein UPF0065; KEGG: rme:Rmet_4876 uncharacterized protein UPF0065
YP_968589.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bcn:Bcen_5605 transcriptional regulator, LysR family
YP_968590.1	PFAM: extracellular solute-binding protein, family 3; KEGG: eba:ebA4561 putative ABC transporter, glutamate receptor
YP_968591.1	PFAM: aminotransferase, class V; KEGG: bcn:Bcen_5603 aminotransferase, class V
YP_968592.1	PFAM: Ureidoglycolate hydrolase; KEGG: bcn:Bcen_0165 ureidoglycolate hydrolase
YP_968593.1	PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: rso:RSc2106 probable amino-acid ATP-binding ABC transporter protein
YP_968594.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc2105 probable amino-acid transmembrane ABC transporter protein
YP_968595.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc2104 probable amino-acid transmembrane ABC transporter protein
YP_968596.1	PFAM: extracellular solute-binding protein, family 3; SMART: ionotropic glutamate receptor; KEGG: rso:RSc2103 probable amino-acid-binding periplasmic (pbp) ABC transporter protein
YP_968597.1	PFAM: regulatory protein GntR, HTH; GntR domain protein; Helix-turn-helix, type 11 domain protein; KEGG: rso:RSc2102 probable transcription regulator protein
YP_968598.1	KEGG: pol:Bpro_4259 putative lipoprotein
YP_968599.1	KEGG: rfr:Rfer_0466 5-methyltetrahydrofolate--homocysteine methyltransferase; TIGRFAM: methionine synthase; PFAM: dihydropteroate synthase, DHPS; Methionine synthase, B12-binding module, cap domain protein; Vitamin B12 dependent methionine synthase, activation region; cobalamin B12-binding domain protein
YP_968600.1	periplasmic; catalyzes the hydrolysis of trehalose to glucose which can then be imported into the cell
YP_968602.1	PFAM: phosphoesterase; protein of unknown function DUF756; KEGG: bcn:Bcen_5326 twin-arginine translocation pathway signal
YP_968603.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bja:bll6496 hypothetical protein
YP_968604.1	PFAM: ribonuclease BN; KEGG: pol:Bpro_1517 ribonuclease BN
YP_968605.1	PFAM: protein of unknown function DUF72; KEGG: xcb:XC_1361 hypothetical protein
YP_968606.1	PFAM: 17 kDa surface antigen; KEGG: pol:Bpro_0175 17 kDa surface antigen
YP_968607.1	PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: rfr:Rfer_0084 ferredoxin--NADP(+) reductase
YP_968608.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rfr:Rfer_0910 transcriptional regulator, LysR family
YP_968609.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: reu:Reut_B3731 histidine kinase, HAMP region:bacterial chemotaxis sensory transducer
YP_968610.1	PFAM: uncharacterized protein UPF0065; KEGG: pol:Bpro_3194 uncharacterized protein UPF0065
YP_968611.1	PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; KEGG: dar:Daro_2150 ATP-binding region, ATPase-like:histidine kinase A, N-terminal
YP_968612.1	PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: dar:Daro_2148 helix-turn-helix, fis-type
YP_968613.1	KEGG: rfr:Rfer_0471 Mg chelatase-related protein; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase, ChlI subunit; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase
YP_968614.1	KEGG: pol:Bpro_0182 hypothetical protein
YP_968615.1	PFAM: nitrogen regulatory protein P-II; KEGG: pol:Bpro_0183 nitrogen regulatory protein P-II (GlnB, GlnK)
YP_968616.1	PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: rfr:Rfer_0479 senescence marker protein-30 (SMP-30)
YP_968618.1	KEGG: mxa:MXAN_4169 hypothetical protein
YP_968620.1	KEGG: mxa:MXAN_5156 hypothetical protein
YP_968621.1	PFAM: PAAR repeat-containing protein; KEGG: sde:Sde_0335 phosphomethylpyrimidine kinase
YP_968622.1	PFAM: Rhs element Vgr protein; Gp5 domain protein; KEGG: pae:PA0095 hypothetical protein
YP_968623.1	PFAM: FAD linked oxidase domain protein; KEGG: rfr:Rfer_0480 FAD linked oxidase-like
YP_968624.1	PFAM: protein of unknown function DUF1275; KEGG: bur:Bcep18194_C7065 protein of unknown function DUF1275
YP_968625.1	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: pol:Bpro_0188 protein of unknown function DUF224, cysteine-rich region
YP_968626.1	KEGG: pol:Bpro_1033 hypothetical protein
YP_968628.1	PFAM: protein of unknown function UPF0074; Helix-turn-helix, type 11 domain protein; KEGG: rso:RSc2673 putative repressor transcription regulator protein
YP_968629.1	KEGG: hhe:HH0294 hypothetical protein
YP_968631.1	PFAM: glutathione peroxidase; KEGG: rfr:Rfer_0484 glutathione peroxidase
YP_968632.1	PFAM: protein of unknown function DUF6, transmembrane; KEGG: rfr:Rfer_0486 protein of unknown function DUF6, transmembrane
YP_968633.1	PFAM: major facilitator superfamily MFS_1; KEGG: pol:Bpro_0192 major facilitator superfamily MFS_1
YP_968634.1	KEGG: pol:Bpro_0193 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein
YP_968635.1	KEGG: xcb:XC_1522 hypothetical protein
YP_968636.1	PFAM: extracellular solute-binding protein, family 5; KEGG: bbr:BB4028 putative binding-protein-dependent transport protein (periplasmic)
YP_968637.1	KEGG: pol:Bpro_2996 fumarylacetoacetase; TIGRFAM: fumarylacetoacetase; PFAM: fumarylacetoacetate (FAA) hydrolase
YP_968638.1	PFAM: uncharacterized protein UPF0065; KEGG: reu:Reut_A2507 hypothetical protein
YP_968639.1	PFAM: protein of unknown function UPF0074; regulatory protein, IclR; KEGG: eba:p2A140 putative IclR-family regulatory protein
YP_968640.1	PFAM: glutathione S-transferase, N-terminal domain; glutathione S-transferase, C-terminal domain; KEGG: sme:SMc00036 putative glutathione S-transferase protein
YP_968641.1	ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis
YP_968642.1	KEGG: dme:Dmel_CG13560 CG13560
YP_968643.1	Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents
YP_968644.1	KEGG: pol:Bpro_0202 hypothetical protein
YP_968645.1	catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids
YP_968646.1	KEGG: rfr:Rfer_0507 hypothetical protein
YP_968647.1	KEGG: mmr:Mmar10_2764 hypothetical protein
YP_968648.1	PFAM: O-antigen polymerase; KEGG: xac:XAC3797 hypothetical protein
YP_968649.1	PFAM: glycosyl transferase, group 1; KEGG: sth:STH1101 glycosyl transferase
YP_968650.1	PFAM: glycosyl transferase, family 2; KEGG: sma:SAV5093 glycosyl transferase
YP_968651.1	KEGG: mmr:Mmar10_2764 hypothetical protein
YP_968652.1	PFAM: 2-nitropropane dioxygenase, NPD; KEGG: cvi:CV4048 probable 2-nitropropane dioxygenase
YP_968653.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_A4554 transcriptional regulator, LysR family
YP_968654.1	PFAM: protein of unknown function DUF1228; KEGG: pol:Bpro_1488 protein of unknown function DUF1228
YP_968655.1	PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; KEGG: rfr:Rfer_0509 periplasmic sensor signal transduction histidine kinase
YP_968656.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rfr:Rfer_0510 two component transcriptional regulator, winged helix family
YP_968657.1	PFAM: major facilitator superfamily MFS_1; KEGG: rfr:Rfer_0516 major facilitator superfamily MFS_1
YP_968658.1	KEGG: xcb:XC_0563 hypothetical protein
YP_968659.1	PFAM: Cupin 2, conserved barrel domain protein; SMART: helix-turn-helix- domain containing protein, AraC type; KEGG: pol:Bpro_0312 transcriptional regulator, AraC family
YP_968660.1	PFAM: protein of unknown function DUF6, transmembrane; KEGG: rsp:RSP_3308 possible transporter, DME family, DMT superfamily
YP_968661.1	PFAM: peptidase M48, Ste24p; 3-oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal domain protein; KEGG: pol:Bpro_0210 peptidase M48, Ste24p
YP_968662.1	TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; Citrate transporter; KEGG: ser:SERP0348 anion transporter family protein
YP_968663.1	PFAM: beta-lactamase domain protein; KEGG: rfr:Rfer_0167 beta-lactamase-like
YP_968664.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bbr:BB4124 putative enzyme-regulator fusion protein
YP_968665.1	PFAM: GAF domain protein; KEGG: tbd:Tbd_1061 putative diguanylate phosphodiesterase (EAL domain) with GAF sensor
YP_968666.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rso:RSc1152 probable transcription regulator protein
YP_968667.1	PFAM: major facilitator superfamily MFS_1; KEGG: rso:RSc1153 putative transmembrane efflux transmembrane protein
YP_968668.1	PFAM: aldo/keto reductase; KEGG: rso:RSc1154 putative reductase oxidoreductase protein
YP_968669.1	KEGG: rfr:Rfer_3929 exodeoxyribonuclease III; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase
YP_968670.1	involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate
YP_968671.1	KEGG: rfr:Rfer_3927 hypothetical protein
YP_968672.1	TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB/Yqey domain protein; GatB N-terminal region; GatB, central domain protein; KEGG: rfr:Rfer_3926 glutamyl-tRNA(Gln) amidotransferase, B subunit
YP_968673.1	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA
YP_968674.1	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain
YP_968675.1	functions in MreBCD complex in some organisms
YP_968676.1	in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall
YP_968677.1	KEGG: pol:Bpro_0224 putative rod shape-determining MreD transmembrane protein
YP_968678.1	PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; KEGG: pol:Bpro_0225 peptidoglycan glycosyltransferase
YP_968679.1	PFAM: protein of unknown function DUF6, transmembrane; KEGG: ttj:TTHA0012 conserved hypothetical protein, integral membrane protein
YP_968680.1	PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_0403 ABC transporter-related protein
YP_968681.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_0402 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine
YP_968682.1	PFAM: extracellular solute-binding protein, family 3; KEGG: pol:Bpro_0401 extracellular solute-binding protein, family 3
YP_968683.1	KEGG: pol:Bpro_4369 L-serine dehydratase 1; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain
YP_968684.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: pol:Bpro_4368 transcriptional regulator, LysR family
YP_968685.1	PFAM: protein of unknown function DUF81; KEGG: rfr:Rfer_3919 protein of unknown function DUF81
YP_968686.1	PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: pol:Bpro_0229 glucose-methanol-choline oxidoreductase
YP_968687.1	PFAM: protein of unknown function DUF140; KEGG: pol:Bpro_0230 protein of unknown function DUF140
YP_968688.1	PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_0231 ABC transporter-related protein
YP_968689.1	PFAM: Mammalian cell entry related domain protein; KEGG: rfr:Rfer_3915 mammalian cell entry related
YP_968690.1	KEGG: pol:Bpro_0233 putative lipoprotein
YP_968691.1	KEGG: xom:XOO_3221 hypothetical protein
YP_968692.1	PFAM: phosphoadenosine phosphosulfate reductase; KEGG: mfa:Mfla_1679 phosphoadenosine phosphosulfate reductase
YP_968693.1	PFAM: CsbD family protein; KEGG: pol:Bpro_1152 CsbD-like
YP_968694.1	KEGG: pol:Bpro_1153 hypothetical protein
YP_968695.1	TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; KEGG: reu:Reut_A0820 hypothetical protein
YP_968697.1	PFAM: Inner membrane CreD family protein; KEGG: pol:Bpro_0235 inner membrane CreD
YP_968698.1	part of a two-component regulatory system with CreB or PhoB; involved in catabolic regulation
YP_968699.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pol:Bpro_0237 two component transcriptional regulator, winged helix family
YP_968700.1	PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: pol:Bpro_0238 multiple antibiotic resistance (MarC)-related protein
YP_968701.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: pol:Bpro_0239 short-chain dehydrogenase/reductase SDR
YP_968702.1	PFAM: dienelactone hydrolase; KEGG: pol:Bpro_0241 carboxymethylenebutenolidase
YP_968703.1	TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: pol:Bpro_3234 drug resistance transporter EmrB/QacA subfamily
YP_968704.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; secretion protein HlyD family protein; KEGG: pol:Bpro_3236 RND efflux system, outer membrane lipoprotein, NodT
YP_968705.1	PFAM: regulatory protein, MarR; KEGG: pol:Bpro_3237 transcriptional regulator, MarR family
YP_968706.1	PFAM: glutamine amidotransferase class-I; KEGG: aeh:Mlg_1607 glutamine amidotransferase class-I
YP_968707.1	PFAM: Mg2+ transporter protein, CorA family protein; KEGG: pol:Bpro_0244 Mg2+ transporter protein, CorA-like
YP_968708.1	catalyzes the formation of porphobilinogen from 5-aminolevulinate
YP_968709.1	PFAM: conserved hypothetical protein 701; KEGG: rfr:Rfer_3804 conserved hypothetical protein 701
YP_968710.1	PFAM: VanZ family protein; KEGG: rfr:Rfer_3803 VanZ like protein
YP_968711.1	KEGG: rfr:Rfer_3802 ferredoxin-like
YP_968712.1	KEGG: pol:Bpro_0249 putative transmembrane protein
YP_968713.1	PFAM: beta-lactamase; peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: pol:Bpro_0250 serine-type D-Ala-D-Ala carboxypeptidase
YP_968714.1	interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance
YP_968715.1	binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit
YP_968716.1	EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene
YP_968717.1	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu
YP_968718.1	NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex
YP_968719.1	binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin
YP_968720.1	L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA
YP_968721.1	binds third domain of 23S rRNA and protein L29; part of exit tunnel
YP_968722.1	one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation
YP_968723.1	protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
YP_968724.1	binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center
YP_968725.1	forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation
YP_968726.1	located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e
YP_968727.1	one of the stabilizing components for the large ribosomal subunit
YP_968728.1	primary binding protein; helps mediate assembly; involved in translation fidelity
YP_968729.1	PFAM: Redoxin domain protein; KEGG: rfr:Rfer_3785 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
YP_968730.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pol:Bpro_0267 GCN5-related N-acetyltransferase
YP_968731.1	PFAM: Redoxin domain protein; KEGG: pol:Bpro_0270 putative transmembrane protein
YP_968732.1	KEGG: pol:Bpro_0295 hypothetical protein
YP_968733.1	PFAM: PTS system fructose subfamily IIA component; KEGG: pol:Bpro_0297 PTS system fructose subfamily IIA component
YP_968734.1	TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: pol:Bpro_0298 HPrNtr
YP_968735.1	TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing enzyme; PEP-utilising enzyme, mobile region; PEP-utilising enzyme domain protein; KEGG: pol:Bpro_0299 phosphoenolpyruvate-protein phosphotransferase
YP_968736.1	catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions
YP_968737.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; K+-transporting ATPase, B subunit; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: dar:Daro_1086 ATPase, E1-E2 type:potassium-translocating P-type ATPase, B subunit
YP_968738.1	KEGG: bbr:BB3919 potassium-transporting ATPase C chain; TIGRFAM: potassium-transporting ATPase, C subunit; PFAM: K+ transporting ATPase, KdpC subunit
YP_968739.1	PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; Osmosensitive K+ channel His kinase sensor; UspA domain protein; KEGG: dar:Daro_1080 ATP-binding region, ATPase-like:histidine kinase A, N-terminal:osmosensitive K+ channel His kinase sensor
YP_968740.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rme:Rmet_0042 two component transcriptional regulator, winged helix family
YP_968743.1	catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group
YP_968744.1	lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein
YP_968745.1	PFAM: protein of unknown function DUF493; KEGG: pol:Bpro_0316 protein of unknown function DUF493
YP_968746.1	KEGG: rfr:Rfer_0113 putative ATP synthase protein I
YP_968747.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0
YP_968748.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0
YP_968749.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.
YP_968750.1	Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex
YP_968751.1	produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit
YP_968752.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit
YP_968753.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit
YP_968754.1	part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane
YP_968755.1	KEGG: ppu:PP_1106 putative mRNA 3-end processing factor
YP_968756.1	catalyzes the ATP-dependent formation of a phosphodiester at the site of a single strand break in duplex DNA
YP_968757.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; DEAD/H associated domain protein; SMART: DEAD-like helicases-like; KEGG: reu:Reut_A1853 helicase, C-terminal:DEAD/DEAH box helicase, N-terminal
YP_968758.1	PFAM: metallophosphoesterase; KEGG: ppu:PP_1102 hypothetical protein
YP_968760.1	PFAM: protein of unknown function DUF477; KEGG: pol:Bpro_0329 protein of unknown function DUF477
YP_968761.1	PFAM: protein of unknown function DUF477; KEGG: pol:Bpro_0330 protein of unknown function DUF477
YP_968762.1	PFAM: LemA family protein; KEGG: rfr:Rfer_0102 LemA
YP_968763.1	KEGG: rfr:Rfer_0101 hypothetical protein
YP_968764.1	KEGG: rpc:RPC_2939 alpha/beta hydrolase fold
YP_968765.1	KEGG: pol:Bpro_0335 hypothetical protein
YP_968766.1	PFAM: cytochrome c, class I; KEGG: pol:Bpro_0336 cytochrome c, class I
YP_968767.1	PFAM: Kelch repeat-containing protein; Kelch repeat protein; KEGG: dre:562661 similar to activin beta B
YP_968768.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: pol:Bpro_2037 RND efflux system, outer membrane lipoprotein, NodT
YP_968769.1	TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: rfr:Rfer_2065 hydrophobe/amphiphile efflux-1 HAE1
YP_968770.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rfr:Rfer_2066 secretion protein HlyD
YP_968771.1	PFAM: regulatory protein, TetR; Tetracycline transcriptional repressor MAATS-type, C-terminal domain protein; KEGG: pol:Bpro_2034 transcriptional regulator, TetR family
YP_968772.1	KEGG: eba:ebA106 hypothetical protein
YP_968773.1	PFAM: plasmid encoded RepA protein; KEGG: xac:XAC2441 replication protein
YP_968774.1	KEGG: nmu:Nmul_A1189 hypothetical protein
YP_968776.1	PFAM: TrbL/VirB6 plasmid conjugal transfer protein; KEGG: bms:BRA0366 trbL protein
YP_968780.1	PFAM: transposase, IS4 family protein; KEGG: bxe:Bxe_C0489 putative transposase IS4
YP_968781.1	KEGG: rba:RB4097 similar to ymc
YP_968782.1	PFAM: phage integrase family protein; KEGG: bpm:BURPS1710b_1722 probable site-specific
YP_968783.1	KEGG: pcr:Pcryo_0811 17 kDa surface antigen
YP_968784.1	PFAM: glutamine amidotransferase, class-II; KEGG: pol:Bpro_4539 glutamine amidotransferase, class-II
YP_968785.1	TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: pol:Bpro_4538 major facilitator superfamily MFS_1
YP_968786.1	4-OT; member of subfamily 5; forms a dimer; the function in the Escherichia coli cell is unknown
YP_968787.1	KEGG: pst:PSPTO_4246 hypothetical protein
YP_968788.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: eca:ECA3642 methyl-accepting chemotaxis protein
YP_968789.1	catalyzes the formation of malate from glyoxylate and acetyl-CoA
YP_968790.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: pol:Bpro_4493 transcriptional regulator, LysR family
YP_968791.1	KEGG: xcb:XC_3717 hypothetical protein
YP_968792.1	PFAM: Pyrrolo-quinoline quinone; KEGG: mes:Meso_3525 pyrrolo-quinoline quinone
YP_968793.1	KEGG: reu:Reut_A0848 probable transmembrane protein
YP_968794.1	PFAM: PsiF repeat protein; KEGG: rfr:Rfer_0772 PsiF
YP_968795.1	catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase
YP_968796.1	PFAM: Sporulation domain protein; KEGG: rfr:Rfer_0774 sporulation related
YP_968797.1	PFAM: DSBA oxidoreductase; KEGG: pol:Bpro_4488 DsbA oxidoreductase
YP_968798.1	PFAM: OstA family protein; KEGG: rfr:Rfer_0776 OstA-like protein
YP_968799.1	PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_4486 ABC transporter-related protein
YP_968800.1	TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor; sigma-54 factor, core-binding region; sigma-54, DNA-binding domain protein; KEGG: rfr:Rfer_0778 sigma-54 (RpoN)
YP_968801.1	PFAM: TspO/MBR family protein; KEGG: csa:Csal_0168 TspO and MBR like protein
YP_968802.1	PFAM: histidine kinase, HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: rso:RSc0606 putative methyl-accepting chemotaxis transmembrane protein
YP_968803.1	PFAM: putative RNA methylase; THUMP domain protein; KEGG: pol:Bpro_4484 putative RNA methylase
YP_968804.1	PFAM: PilT protein domain protein; KEGG: rfr:Rfer_0780 protein of unknown function DUF132
YP_968805.1	PFAM: ABC transporter-related protein; SbmABacA family protein; ABC transporter domain protein; SMART: AAA ATPase; KEGG: dar:Daro_0045 ABC transporter-related protein
YP_968806.1	KEGG: nma:NMA1441 hypothetical protein
YP_968807.1	PFAM: SEC-C motif domain protein; KEGG: reu:Reut_B5710 sec-C motif
YP_968808.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: xcb:XC_0640 sulfate permease
YP_968809.1	PFAM: chemotaxis sensory transducer; CHASE3 domain protein; KEGG: tbd:Tbd_1619 chemotaxis sensory transducer
YP_968810.1	PFAM: CinA domain protein; KEGG: pol:Bpro_4476 CinA-like
YP_968811.1	PFAM: phosphatidylglycerophosphatase A; KEGG: pol:Bpro_4475 phosphatidylglycerophosphatase A
YP_968812.1	KEGG: pcr:Pcryo_2312 hypothetical protein
YP_968813.1	KEGG: pol:Bpro_4471 thiamine-monophosphate kinase; TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein domain protein
YP_968814.1	KEGG: xcb:XC_1210 hypothetical protein
YP_968815.1	ATP-dependent; carboxylate-amine ligase with weak glutamate--cysteine ligase activity
YP_968816.1	PFAM: sodium/hydrogen exchanger; KEGG: pol:Bpro_4469 sodium/hydrogen exchanger
YP_968817.1	KEGG: rfr:Rfer_0530 putative site-specific recombinase transmembrane protein
YP_968818.1	protein associated with Co2+ and Mg2+ efflux
YP_968819.1	PFAM: ribulose-phosphate 3-epimerase; KEGG: rfr:Rfer_0532 ribulose-phosphate 3-epimerase
YP_968820.1	KEGG: bbr:BB3039 hypothetical protein
YP_968821.1	KEGG: pol:Bpro_4462 phosphoglycolate phosphatase; TIGRFAM: phosphoglycolate phosphatase ; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase
YP_968822.1	KEGG: pol:Bpro_4459 putative lipoprotein transmembrane
YP_968823.1	with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine
YP_968824.1	PFAM: Chorismate mutase; KEGG: pol:Bpro_4456 chorismate mutase
YP_968825.1	PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: bma:BMAA1621 regulatory protein HrpB
YP_968826.1	PFAM: transcriptional regulator domain protein; KEGG: xcb:XC_3077 HrpG protein
YP_968827.1	PFAM: Tir chaperone family protein; KEGG: bte:BTH_II0761 hypothetical protein
YP_968829.1	TIGRFAM: type III secretion protein, HrpO family; PFAM: export protein FliQ, family 3; KEGG: rso:RSp0859 hrp conserved hrcS transmembrane protein
YP_968830.1	part of a set of proteins involved in the infection of eukaryotic cells; in plant pathogens involved in the hypersensitivity response
YP_968831.1	TIGRFAM: type III secretion system apparatus protein YscQ/HrcQ; PFAM: surface presentation of antigens (SPOA) protein; KEGG: bpm:BURPS1710b_A0677 type III secretion inner membrane protein SctQ
YP_968832.1	KEGG: bja:blr0521 hypothetical protein
YP_968833.1	TIGRFAM: type III secretion protein, HrcV family; PFAM: type III secretion FHIPEP protein; KEGG: bma:BMAA1630 type III secretion inner membrane protein SctV
YP_968834.1	TIGRFAM: type III secretion protein, YscU/HrpY family; PFAM: type III secretion exporter; KEGG: xcb:XC_3012 HrcU protein
YP_968835.1	KEGG: bpm:BURPS1710b_A0687 type III secretion protein HrpB7
YP_968836.1	TIGRFAM: type III secretion protein SpaR/YscT/HrcT; PFAM: type III secretion system inner membrane R protein; KEGG: xom:XOO_0083 HrcT protein
YP_968837.1	KEGG: mtc:MT3615.3 PE_PGRS family protein
YP_968838.1	KEGG: mtc:MT1689 PE_PGRS family protein
YP_968839.1	SMART: Leucine-rich repeat, ribonuclease inhibitor subtype; KEGG: rso:RSc1801 GalA protein 3
YP_968842.1	KEGG: xoo:XOO0097 hypothetical protein
YP_968844.1	KEGG: xom:XOO_0085 HrcN protein; TIGRFAM: ATPase, FliI/YscN family; type III secretion apparatus H+-transporting two-sector ATPase; PFAM: H+-transporting two-sector ATPase, alpha/beta subunit, central region; H+-transporting two-sector ATPase, alpha/beta subunit domain protein; SMART: AAA ATPase
YP_968845.1	TIGRFAM: type III secretion apparatus protein, HrpE/YscL family; KEGG: bpm:BURPS1710b_A0423 HrpF
YP_968846.1	KEGG: xcb:XC_3008 HrpB4 protein
YP_968847.1	TIGRFAM: type III secretion apparatus lipoprotein, YscJ/HrcJ family; PFAM: secretory protein YscJ/FliF family protein; KEGG: rso:RSp0867 hrp conserved lipoprotein hrcJ transmembrane
YP_968849.1	KEGG: xom:XOO_0090 HrpB1 protein
YP_968854.1	KEGG: bps:BPSS1407 secretion-associated protein
YP_968855.1	TIGRFAM: type III secretion outer membrane pore, YscC/HrcC family; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: bpm:BURPS1710b_A0648 type III secretion outer membrane pore, YscC/HrcC family
YP_968856.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rru:Rru_B0031 hypothetical protein
YP_968857.1	PFAM: Lytic transglycosylase, catalytic; KEGG: rme:Rmet_2520 lytic transglycosylase, catalytic
YP_968860.1	KEGG: xcb:XC_3011 HrpB1 protein
YP_968861.1	KEGG: mag:amb3422 hypothetical protein
YP_968862.1	PFAM: Rhs element Vgr protein; KEGG: bur:Bcep18194_B1581 rhs element Vgr protein
YP_968863.1	KEGG: yps:YPTB3622 hypothetical protein
YP_968864.1	PFAM: PAAR repeat-containing protein; KEGG: bur:Bcep18194_B0648 rhs family protein
YP_968865.1	PFAM: phage integrase family protein; KEGG: psp:PSPPH_0667 prophage PSPPH01, site-specific recombinase, phage integrase family
YP_968866.1	PFAM: Integrase, catalytic region; KEGG: bpa:BPP1897 IS1002 transposase
YP_968867.1	KEGG: eba:ebB79 hypothetical protein
YP_968868.1	PFAM: phosphoadenosine phosphosulfate reductase; KEGG: xac:XAC2285 hypothetical protein
YP_968869.1	KEGG: xac:XAC2284 hypothetical protein
YP_968870.1	PFAM: protein of unknown function DUF1527; KEGG: xac:XAC2283 hypothetical protein
YP_968871.1	PFAM: protein of unknown function DUF1525; KEGG: xac:XAC2282 hypothetical protein
YP_968872.1	PFAM: DNA repair protein RadC; KEGG: xac:XAC2281 RadC family protein
YP_968873.1	KEGG: xac:XAC2280 hypothetical protein
YP_968874.1	PFAM: uncharacterized protein UPF0065; KEGG: xac:XAC2278 hypothetical protein
YP_968875.1	PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: xac:XAC2277 3-hydroxyisobutirate dehydrogenase
YP_968876.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: xac:XAC2276 transcriptional regulator
YP_968877.1	PFAM: Rhs element Vgr protein; KEGG: bps:BPSS2093 hypothetical protein
YP_968878.1	KEGG: yps:YPTB3622 hypothetical protein
YP_968879.1	TIGRFAM: YD repeat protein; PFAM: RHS protein; YD repeat-containing protein; PAAR repeat-containing protein; KEGG: bur:Bcep18194_B0648 rhs family protein
YP_968880.1	KEGG: atc:AGR_L_2371 hypothetical protein
YP_968881.1	KEGG: xac:XAC2275 hypothetical protein
YP_968882.1	KEGG: xac:XAC2274 hypothetical protein
YP_968883.1	KEGG: xcb:XC_2032 hypothetical protein
YP_968884.1	KEGG: xac:XAC2273 hypothetical protein
YP_968885.1	KEGG: xac:XAC2272 hypothetical protein
YP_968886.1	KEGG: bxe:Bxe_A1188 hypothetical protein
YP_968887.1	KEGG: xac:XAC2271 hypothetical protein
YP_968888.1	KEGG: xac:XAC2270 hypothetical protein
YP_968889.1	KEGG: xcv:XCV2374 hypothetical protein
YP_968890.1	KEGG: xac:XAC2269 hypothetical protein
YP_968891.1	KEGG: sco:SCO4670 serine protease precursor
YP_968892.1	PFAM: Resolvase, N-terminal domain; Recombinase; KEGG: nwi:Nwi_1951 resolvase
YP_968893.1	PFAM: transposase IS3/IS911 family protein; KEGG: mxa:MXAN_1716 transposase orfA, IS3 family
YP_968894.1	PFAM: Integrase, catalytic region; KEGG: mxa:MXAN_4473 transposase orfB, IS3 family
YP_968896.1	KEGG: rfr:Rfer_1225 hypothetical protein
YP_968897.1	KEGG: rfr:Rfer_1226 hypothetical protein
YP_968898.1	KEGG: nmu:Nmul_A2599 DNA polymerase III, alpha subunit; PFAM: PHP C-terminal domain protein; DNA polymerase III, alpha subunit; SMART: phosphoesterase PHP domain protein
YP_968899.1	PFAM: Integrase, catalytic region; KEGG: mxa:MXAN_4473 transposase orfB, IS3 family
YP_968900.1	PFAM: transposase IS3/IS911 family protein; KEGG: mxa:MXAN_1716 transposase orfA, IS3 family
YP_968901.1	PFAM: transposase, IS4 family protein; KEGG: cvi:CV0957 TIS1421-transposase protein B
YP_968902.1	KEGG: rso:RSp0990 probable TIS1421-transposase orfA protein
YP_968903.1	KEGG: vfi:VFA0037 hypothetical protein
YP_968904.1	PFAM: SEFIR domain protein; KEGG: shm:Shewmr7_1857 SEFIR domain protein
YP_968905.1	KEGG: xac:XAC2260 hypothetical protein
YP_968906.1	KEGG: eba:ebA2421 hypothetical protein
YP_968907.1	KEGG: xac:XAC2257 hypothetical protein
YP_968908.1	PFAM: Lytic transglycosylase, catalytic; KEGG: xac:XAC2256 hypothetical protein
YP_968909.1	KEGG: xac:XAC2255 hypothetical protein
YP_968910.1	KEGG: eba:ebA2426 hypothetical protein
YP_968911.1	KEGG: xac:XAC2253 PilL protein
YP_968912.1	KEGG: xfa:XF2428 hypothetical protein
YP_968914.1	PFAM: MASE1 domain protein; KEGG: xcv:XCV1810 putative sugar transporter component
YP_968915.1	KEGG: xcv:XCV1811 putative secreted protein
YP_968916.1	KEGG: xac:XAC2249 hypothetical protein
YP_968917.1	KEGG: xac:XAC2247 hypothetical protein
YP_968918.1	PFAM: protein of unknown function DUF1629; KEGG: xac:XAC2246 hypothetical protein
YP_968919.1	SMART: DEAD-like helicases-like; KEGG: xac:XAC2243 plasmid-related protein
YP_968920.1	KEGG: xcv:XCV2388 hypothetical protein
YP_968921.1	KEGG: rme:Rmet_2327 hypothetical protein
YP_968922.1	KEGG: bxe:Bxe_A1204 hypothetical protein
YP_968923.1	KEGG: rme:Rmet_2325 hypothetical protein
YP_968924.1	KEGG: xfa:XF1758 hypothetical protein
YP_968925.1	KEGG: rme:Rmet_2322 hypothetical protein
YP_968926.1	KEGG: rme:Rmet_2320 hypothetical protein
YP_968927.1	KEGG: xac:XAC2221 hypothetical protein
YP_968928.1	PFAM: Integrase, catalytic region; KEGG: bpa:BPP1897 IS1002 transposase
YP_968929.1	KEGG: xac:XAC2219 hypothetical protein
YP_968930.1	KEGG: xac:XAC2221 hypothetical protein
YP_968931.1	KEGG: eba:ebA2454 hypothetical protein
YP_968932.1	KEGG: xac:XAC2218 hypothetical protein
YP_968933.1	KEGG: xac:XAC2217 hypothetical protein
YP_968934.1	KEGG: dar:Daro_2290 ATP-binding region, ATPase-like
YP_968935.1	KEGG: rpc:RPC_0124 hypothetical protein
YP_968936.1	TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; KEGG: xac:XAC2213 cytosine-specific DNA methyltransferase
YP_968937.1	decatenates replicating daughter chromosomes
YP_968938.1	binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA
YP_968939.1	PFAM: DNA methylase N-4/N-6 domain protein; KEGG: psb:Psyr_2825 DNA methylase N-4/N-6
YP_968940.1	KEGG: net:Neut_0118 conserved hypothetical protein
YP_968941.1	KEGG: rme:Rmet_2295 hypothetical protein
YP_968942.1	KEGG: xac:XAC2208 hypothetical protein
YP_968943.1	KEGG: xac:XAC2207 hypothetical protein
YP_968944.1	KEGG: xac:XAC2206 hypothetical protein
YP_968945.1	PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: xac:XAC2205 chromosome partitioning related protein
YP_968946.1	PFAM: Prophage CP4-57 regulatory; KEGG: xac:XAC2204 prophage regulatory protein
YP_968947.1	PFAM: protein of unknown function DUF1528; Relaxase; KEGG: xac:XAC2196 hypothetical protein
YP_968948.1	PFAM: NAD/NADP octopine/nopaline dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: ppr:PBPRB0771 hypothetical NAD/NADP octopine/nopalinedehydrogenas
YP_968949.1	PFAM: protein of unknown function DUF6, transmembrane; KEGG: rsp:RSP_0987 putative transporter, RarD family, DMT superfamily
YP_968950.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: pol:Bpro_4421 transcriptional regulator, LysR family
YP_968951.1	PFAM: MmgE/PrpD family protein; KEGG: mlo:mll9010 hypothetical protein
YP_968952.1	PFAM: FAD dependent oxidoreductase; KEGG: pol:Bpro_4423 FAD dependent oxidoreductase
YP_968953.1	PFAM: Endoribonuclease L-PSP; KEGG: pol:Bpro_4397 endoribonuclease L-PSP
YP_968954.1	PFAM: uncharacterized protein UPF0065; KEGG: pol:Bpro_2068 uncharacterized protein UPF0065
YP_968955.1	KEGG: cps:CPS_1614 hypothetical protein
YP_968956.1	PFAM: helicase domain protein; type III restriction enzyme, res subunit; SMART: DEAD-like helicases-like; KEGG: dvu:DVU2175 adenine specific DNA methyltransferase, putative
YP_968957.1	PFAM: SpoVT/AbrB domain protein; KEGG: xac:XAC2188 cell growth regulatory protein
YP_968958.1	PFAM: PilT protein domain protein; KEGG: xac:XAC2187 hypothetical protein
YP_968959.1	KEGG: net:Neut_0072 conserved hypothetical protein
YP_968960.1	KEGG: xac:XAC2186 hypothetical protein
YP_968961.1	TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity
YP_968962.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pol:Bpro_4453 lysine exporter protein (LysE/YggA)
YP_968963.1	Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate
YP_968964.1	involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water
YP_968965.1	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
YP_968966.1	KEGG: rso:RS05518 hypothetical protein
YP_968967.1	PFAM: gamma-glutamyltranspeptidase; KEGG: pol:Bpro_1819 gamma-glutamyltransferase
YP_968968.1	PFAM: Queuosine biosynthesis protein; KEGG: rfr:Rfer_0628 S-adenosylmethionine
YP_968969.1	PFAM: helix-turn-helix- domain containing protein, AraC type; AraC protein, arabinose-binding/dimerisation; KEGG: pol:Bpro_1731 transcriptional regulator, AraC family
YP_968970.1	KEGG: rfr:Rfer_3329 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region
YP_968971.1	catalyzes branch migration in Holliday junction intermediates
YP_968972.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rfr:Rfer_3681 transcriptional regulator, LysR family
YP_968973.1	PFAM: Ferritin, Dps family protein; KEGG: rso:RSc2687 putative DNA protection during starvation or oxydative stress transcription regulator protein
YP_968974.1	TIGRFAM: 4-hydroxybenzoate polyprenyl transferase; PFAM: UbiA prenyltransferase; KEGG: rfr:Rfer_3680 4-hydroxybenzoate polyprenyl transferase
YP_968975.1	KEGG: bbr:BB4267 hypothetical protein
YP_968976.1	PFAM: GtrA family protein; KEGG: mfa:Mfla_1376 GtrA-like protein
YP_968977.1	PFAM: glycosyl transferase, family 2; KEGG: lpn:lpg2478 glycosyltransferase, group 2 family protein (glycan biosynthesis)
YP_968978.1	KEGG: reu:Reut_B3508 putative 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family
YP_968979.1	KEGG: pol:Bpro_0475 pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein
YP_968980.1	TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase, FGGY; KEGG: pol:Bpro_0476 glycerol kinase
YP_968981.1	PFAM: regulatory protein, DeoR; Helix-turn-helix, type 11 domain protein; KEGG: pol:Bpro_0477 transcriptional regulator, DeoR family
YP_968982.1	PFAM: ABC transporter-related protein; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rfr:Rfer_3676 ABC transporter-related protein
YP_968983.1	PFAM: ABC transporter-related protein; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: pol:Bpro_0479 ABC transporter-related protein
YP_968984.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_0480 binding-protein-dependent transport systems inner membrane component
YP_968985.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_0481 binding-protein-dependent transport systems inner membrane component
YP_968986.1	KEGG: rfr:Rfer_3672 putative integral membrane protein
YP_968987.1	PFAM: extracellular solute-binding protein, family 1; KEGG: pol:Bpro_0483 twin-arginine translocation pathway signal
YP_968988.1	PFAM: FAD dependent oxidoreductase; KEGG: pol:Bpro_0484 FAD dependent oxidoreductase
YP_968989.1	binds to the 23S rRNA between the centers for peptidyl transferase and GTPase
YP_968990.1	assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel
YP_968991.1	part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13
YP_968992.1	located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif
YP_968993.1	binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
YP_968994.1	ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance
YP_968995.1	binds 5S rRNA along with protein L5 and L25
YP_968996.1	located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance
YP_968997.1	L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7
YP_968998.1	late assembly protein
YP_968999.1	forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase
YP_969000.1	smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif
YP_969001.1	located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA
YP_969002.1	located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3
YP_969003.1	primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination
YP_969004.1	catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme
YP_969005.1	PFAM: ribosomal protein L17; KEGG: rfr:Rfer_4216 ribosomal protein L17
YP_969006.1	KEGG: rfr:Rfer_1948 molecular chaperone, HSP70 class
YP_969007.1	PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: rfr:Rfer_3872 protein of unknown function UPF0011
YP_969008.1	PFAM: protein of unknown function UPF0102; KEGG: rfr:Rfer_3873 protein of unknown function UPF0102
YP_969009.1	KEGG: rfr:Rfer_3874 phosphoheptose isomerase
YP_969010.1	PFAM: transport-associated; SMART: Transport-associated and nodulation region, bacteria; KEGG: rfr:Rfer_3875 transport-associated
YP_969011.1	PFAM: NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: rfr:Rfer_3876 6-phosphogluconate dehydrogenase, NAD-binding
YP_969012.1	PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: bcn:Bcen_2208 transposase IS116/IS110/IS902
YP_969013.1	TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: pol:Bpro_0395 twitching motility protein
YP_969014.1	PFAM: cyclic nucleotide-binding; KEGG: psb:Psyr_1573 cyclic nucleotide-binding
YP_969015.1	KEGG: rfr:Rfer_3878 twitching motility protein; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: AAA ATPase
YP_969016.1	PFAM: alanine racemase domain protein; KEGG: pol:Bpro_0397 protein of unknown function UPF0001
YP_969017.1	PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rfr:Rfer_3604 threonine aldolase
YP_969018.1	PFAM: aminotransferase, class V; aminotransferase class-III; KEGG: pol:Bpro_4174 aminotransferase, class V
YP_969019.1	PFAM: protein of unknown function DUF445; KEGG: bxe:Bxe_B1234 hypothetical protein
YP_969020.1	KEGG: csa:Csal_3246 hypothetical protein
YP_969021.1	KEGG: csa:Csal_3246 hypothetical protein
YP_969022.1	KEGG: xac:XAC2280 hypothetical protein
YP_969023.1	PFAM: FAD linked oxidase domain protein; KEGG: pol:Bpro_0433 FAD linked oxidase-like
YP_969024.1	PFAM: UvrD/REP helicase; KEGG: rru:Rru_A1536 UvrD/REP helicase
YP_969025.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: pol:Bpro_0437 transcriptional regulator, LysR family
YP_969026.1	produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine
YP_969027.1	KEGG: rfr:Rfer_3572 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_969029.1	PFAM: MgtC/SapB transporter; KEGG: pfo:Pfl_1861 MgtC/SapB transporter
YP_969030.1	KEGG: pol:Bpro_0441 hypothetical protein
YP_969031.1	PFAM: regulatory protein, LuxR; response regulator receiver; Bacterio-opsin activator, HTH domain protein; KEGG: rfr:Rfer_1869 two component transcriptional regulator, LuxR family
YP_969032.1	PFAM: major facilitator superfamily MFS_1; KEGG: mxa:MXAN_5357 siderophore transporter, RhtX/FptX family
YP_969033.1	PFAM: O-methyltransferase, family 2; Methyltransferase type 11; Methyltransferase type 12; KEGG: eca:ECA1544 putative methyltransferase
YP_969034.1	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: wsu:WS1610 receptor precursor-mostly Fe transport
YP_969035.1	PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: pfl:PFL_2326 transcriptional regulator, AraC family
YP_969036.1	PFAM: major facilitator superfamily MFS_1; KEGG: pol:Bpro_4597 major facilitator superfamily MFS_1
YP_969037.1	TIGRFAM: nitrite transporter; KEGG: gme:Gmet_0334 nitrate transporter
YP_969038.1	TIGRFAM: nitrate reductase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: pol:Bpro_4595 nitrate reductase, alpha subunit
YP_969039.1	KEGG: rfr:Rfer_2793 nitrate reductase, beta subunit; TIGRFAM: nitrate reductase, beta subunit; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein
YP_969040.1	TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; PFAM: Nitrate reductase, delta subunit; KEGG: pol:Bpro_4593 nitrate reductase molybdenum cofactor assembly chaperone
YP_969041.1	TIGRFAM: respiratory nitrate reductase, gamma subunit; PFAM: Nitrate reductase, gamma subunit; KEGG: pol:Bpro_4592 respiratory nitrate reductase, gamma subunit
YP_969042.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: rfr:Rfer_2796 PpiC-type peptidyl-prolyl cis-trans isomerase
YP_969043.1	PFAM: carbonic anhydrase; KEGG: pol:Bpro_4590 carbonate dehydratase
YP_969044.1	KEGG: pol:Bpro_4588 ribonucleoside reductase; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase large subunit, N terminal domain protein; SMART: Hedgehog/intein hint domain protein
YP_969045.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bja:blr0519 hypothetical protein
YP_969046.1	PFAM: Hemerythrin HHE cation binding domain protein; KEGG: pol:Bpro_4585 hypothetical protein
YP_969047.1	PFAM: phage integrase family protein; KEGG: rme:Rmet_3045 phage integrase
YP_969048.1	PFAM: protein of unknown function DUF1016; KEGG: rme:Rmet_3044 protein of unknown function DUF1016
YP_969049.1	PFAM: Integrase, catalytic region; KEGG: bpa:BPP2353 IS1002 transposase
YP_969050.1	PFAM: UvrD/REP helicase; KEGG: bfs:BF1103 putative ATP-dependent DNA helicase
YP_969051.1	KEGG: bfs:BF1102 conserved hypothetical protein with RecF/RecN/SMC N-terminal domain
YP_969052.1	KEGG: rme:Rmet_3038 hypothetical protein
YP_969054.1	PFAM: protein of unknown function DUF932; KEGG: rme:Rmet_1244 protein of unknown function DUF932
YP_969055.1	PFAM: ParB domain protein nuclease; KEGG: rme:Rmet_1245 ParB-like nuclease
YP_969056.1	PFAM: protein of unknown function DUF736; KEGG: rso:RSc2613 hypothetical protein
YP_969057.1	PFAM: helix-turn-helix domain protein; KEGG: rme:Rmet_1249 transcriptional regulator, XRE family
YP_969058.1	KEGG: rso:RSc2609 probable lipoprotein
YP_969059.1	KEGG: rso:RSc2608 hypothetical/unknown protein
YP_969060.1	KEGG: rso:RSc2607 hypothetical protein
YP_969061.1	KEGG: rso:RSc2606 hypothetical replication initiator and transcription repressor protein
YP_969062.1	PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: rme:Rmet_1486 cobyrinic acid a,c-diamide synthase
YP_969063.1	KEGG: rso:RSc2604 hypothetical/unknown protein
YP_969064.1	KEGG: rso:RSc2603 hypothetical/unknown protein
YP_969065.1	KEGG: rso:RSc2602 probable conjugal transfer TRAF transmembrane protein
YP_969066.1	KEGG: rso:RSc2601 hypothetical/unknown protein
YP_969067.1	PFAM: transposase IS3/IS911 family protein; KEGG: mxa:MXAN_1716 transposase orfA, IS3 family
YP_969068.1	PFAM: Integrase, catalytic region; KEGG: mxa:MXAN_4473 transposase orfB, IS3 family
YP_969069.1	PFAM: Integrase, catalytic region; KEGG: eba:ebA5932 transposase
YP_969070.1	KEGG: eba:ebA5933 transposition helper protein
YP_969071.1	PFAM: Cupin 2, conserved barrel domain protein; SMART: helix-turn-helix- domain containing protein, AraC type; KEGG: mxa:MXAN_2216 transcriptional regulator, AraC family
YP_969072.1	PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: par:Psyc_1604 D-cysteine desulfhydrase
YP_969073.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: sal:Sala_0366 transcriptional regulator, LysR family
YP_969074.1	PFAM: NAD(P)H dehydrogenase (quinone); KEGG: sal:Sala_0365 (acyl-carrier protein) phosphodiesterase
YP_969075.1	PFAM: major facilitator superfamily MFS_1; KEGG: pfo:Pfl_5034 major facilitator superfamily MFS_1
YP_969076.1	KEGG: eca:ECA2224 putative transporter
YP_969077.1	PFAM: Integrase, catalytic region; KEGG: mxa:MXAN_4473 transposase orfB, IS3 family
YP_969078.1	PFAM: transposase IS3/IS911 family protein; KEGG: mxa:MXAN_1716 transposase orfA, IS3 family
YP_969079.1	KEGG: sco:SCO4462 integral membrane protein
YP_969080.1	PFAM: transposase IS3/IS911 family protein; KEGG: mxa:MXAN_1716 transposase orfA, IS3 family
YP_969081.1	PFAM: Integrase, catalytic region; KEGG: mxa:MXAN_4473 transposase orfB, IS3 family
YP_969082.1	PFAM: Integrase, catalytic region; KEGG: mxa:MXAN_4473 transposase orfB, IS3 family
YP_969083.1	PFAM: transposase IS3/IS911 family protein; KEGG: mxa:MXAN_1716 transposase orfA, IS3 family
YP_969084.1	PFAM: transposase IS66; KEGG: rfr:Rfer_2711 transposase IS66
YP_969085.1	PFAM: IS66 Orf2 family protein; KEGG: ppu:PP_4438 ISPpu14, transposase Orf2
YP_969086.1	PFAM: transposase IS3/IS911 family protein; KEGG: pst:PSPTO_5581 hypothetical protein
YP_969087.1	PFAM: NAD(P)H dehydrogenase (quinone); KEGG: mes:Meso_3301 NAD(P)H dehydrogenase (quinone)
YP_969088.1	PFAM: GCN5-related N-acetyltransferase; KEGG: wsu:WS0665 hypothetical protein
YP_969089.1	PFAM: aldo/keto reductase; KEGG: sme:SMc01429 putative oxidoreductase protein
YP_969090.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: pen:PSEEN4981 transcriptional regulator, LysR family
YP_969091.1	PFAM: major facilitator superfamily MFS_1; KEGG: cef:CE2495 hypothetical protein
YP_969092.1	PFAM: small multidrug resistance protein; KEGG: pae:PA1541 probable drug efflux transporter
YP_969093.1	KEGG: eba:ebA5933 transposition helper protein
YP_969094.1	PFAM: Integrase, catalytic region; KEGG: eba:ebA5932 transposase
YP_969095.1	PFAM: small multidrug resistance protein; KEGG: pae:PA1540 small multidrug resistance protein, SMR family
YP_969096.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rso:RSc2588 probable transcription regulator protein
YP_969097.1	KEGG: rso:RSc2587 probable lipoprotein
YP_969098.1	type IV secretion VirD4 coupling protein family
YP_969099.1	PFAM: CopG domain protein DNA-binding domain protein; KEGG: rme:Rmet_1549 CopG-like DNA-binding
YP_969100.1	PFAM: type II secretion system protein E; KEGG: rso:RSc2584 probable conjugal transfer protein TrbB
YP_969101.1	PFAM: Conjugal transfer protein TrbC; KEGG: rso:RSc2583 probable conjugal transfer trbC transmembrane protein
YP_969102.1	KEGG: rme:Rmet_1552 putative conjugal transfer TrbD transmembrane protein
YP_969103.1	type IV secretion system VirB4 family
YP_969104.1	KEGG: rso:RSc2580 probable conjugal transfer TrbJ signal peptide protein
YP_969105.1	KEGG: rso:RSc2579 probable lipoprotein
YP_969106.1	type IV secretion VirB6 family
YP_969107.1	PFAM: Conjugal transfer protein; KEGG: rme:Rmet_1348 conjugal transfer protein
YP_969108.1	PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: rso:RSc2576 probable conjugal transfer lipoprotein TrbG
YP_969109.1	PFAM: conjugation TrbI family protein; KEGG: rso:RSc2575 probable conjugal transfer trbi transmembrane protein
YP_969110.1	KEGG: rso:RSc2574 hypothetical/unknown protein
YP_969111.1	PFAM: Cupin 2, conserved barrel domain protein; KEGG: hma:rrnB0187 putative cupin
YP_969112.1	PFAM: major facilitator superfamily MFS_1; KEGG: pfo:Pfl_2726 major facilitator superfamily MFS_1
YP_969113.1	KEGG: pol:Bpro_0443 hypothetical protein
YP_969114.1	KEGG: pol:Bpro_0444 hypothetical protein
YP_969115.1	PFAM: regulatory protein, IclR; KEGG: pol:Bpro_0445 transcriptional regulator, IclR family
YP_969116.1	PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: pol:Bpro_0446 fumarylacetoacetate (FAA) hydrolase
YP_969117.1	PFAM: GumN family protein; KEGG: gox:GOX1248 hypothetical protein
YP_969118.1	PFAM: uncharacterized protein UPF0065; KEGG: reu:Reut_A0112 hypothetical protein
YP_969119.1	PFAM: ThiJ/PfpI domain protein; KEGG: rfr:Rfer_0019 ThiJ/PfpI
YP_969120.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rru:Rru_A0631 putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain
YP_969121.1	PFAM: Hly-III family protein; KEGG: pol:Bpro_4730 channel protein, hemolysin III family
YP_969122.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: pfo:Pfl_2170 putative diguanylate cyclase (GGDEF domain)
YP_969123.1	TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: pol:Bpro_4500 TRAP dicarboxylate transporter-DctM subunit
YP_969124.1	PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: pol:Bpro_4501 tripartite ATP-independent periplasmic transporter, DctQ component
YP_969125.1	KEGG: sco:SCO0361 hypothetical protein
YP_969126.1	catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate
YP_969127.1	TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: gka:GK1971 C4-dicarboxylate transport system (C4-dicarboxylate-binding protein)
YP_969128.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: ppu:PP_2833 transcriptional regulator, LysR family
YP_969129.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: xom:XOO_2783 transcriptional regulator
YP_969130.1	PFAM: pirin domain protein; KEGG: pfo:Pfl_1955 pirin-like
YP_969131.1	PFAM: isochorismatase hydrolase; KEGG: cvi:CV1284 probable hydrolase
YP_969132.1	PFAM: Amidohydrolase 3; KEGG: bpm:BURPS1710b_A1987 RC145
YP_969133.1	PFAM: DoxX family protein; KEGG: rme:Rmet_5314 DoxX
YP_969134.1	PFAM: protein of unknown function DUF894, DitE; major facilitator superfamily MFS_1; KEGG: atc:AGR_L_1740 hypothetical protein
YP_969135.1	KEGG: bbr:BB0777 hypothetical protein
YP_969136.1	KEGG: bbr:BB0776 hypothetical protein
YP_969137.1	KEGG: plu:plu3302 hypothetical protein
YP_969138.1	KEGG: plu:plu3301 hypothetical protein
YP_969139.1	PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: pol:Bpro_4032 molybdopterin oxidoreductase
YP_969140.1	PFAM: Extracellular ligand-binding receptor; KEGG: rme:Rmet_3153 extracellular ligand-binding receptor
YP_969141.1	TIGRFAM: acetylornithine deacetylase (ArgE); PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: pol:Bpro_2527 acetylornithine deacetylase (ArgE)
YP_969142.1	KEGG: pol:Bpro_2111 peptidase M20D, amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein
YP_969143.1	KEGG: pol:Bpro_2110 hypothetical protein
YP_969144.1	PFAM: chemotaxis sensory transducer; KEGG: bxe:Bxe_B2682 methyl-accepting chemotaxis sensory transducer
YP_969145.1	PFAM: acyl-coA-binding protein, ACBP; KEGG: rfr:Rfer_3532 acyl-coA-binding protein, ACBP
YP_969146.1	KEGG: pol:Bpro_4033 putative zinc protease protein
YP_969147.1	PFAM: methyladenine glycosylase; KEGG: pol:Bpro_3540 DNA-3-methyladenine glycosylase I
YP_969148.1	KEGG: rfr:Rfer_0521 hypothetical protein
YP_969149.1	PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: pol:Bpro_3190 cyclopropane-fatty-acyl-phospholipid synthase
YP_969150.1	KEGG: rfr:Rfer_3535 hypothetical protein
YP_969151.1	PFAM: uncharacterized protein UPF0065; KEGG: pol:Bpro_0596 uncharacterized protein UPF0065
YP_969152.1	PFAM: uncharacterized protein UPF0065; KEGG: pol:Bpro_0597 uncharacterized protein UPF0065
YP_969153.1	KEGG: rfr:Rfer_3536 putative phenylacetate-CoA ligase
YP_969154.1	PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: rfr:Rfer_3537 ABC transporter-related protein
YP_969155.1	KEGG: bbr:BB0229 hypothetical protein
YP_969156.1	PFAM: inner-membrane translocator; KEGG: rfr:Rfer_3539 inner-membrane translocator
YP_969157.1	PFAM: inner-membrane translocator; KEGG: pol:Bpro_0602 inner-membrane translocator
YP_969158.1	PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_0603 ABC transporter-related protein
YP_969159.1	PFAM: AMP-dependent synthetase and ligase; KEGG: pol:Bpro_0604 AMP-dependent synthetase and ligase
YP_969160.1	PFAM: Peptidoglycan-binding domain 1 protein; SMART: AAA ATPase; KEGG: pol:Bpro_2822 peptidoglycan-binding domain 1
YP_969161.1	KEGG: pol:Bpro_2821 hypothetical protein
YP_969162.1	PFAM: peptidase M48, Ste24p; KEGG: rme:Rmet_2801 peptidase M48, Ste24p
YP_969163.1	PFAM: protein of unknown function DUF898, transmembrane; KEGG: rme:Rmet_2800 protein of unknown function DUF898, transmembrane
YP_969164.1	PFAM: RNA-binding S4 domain protein; KEGG: pol:Bpro_1128 RNA-binding S4
YP_969165.1	PFAM: NUDIX hydrolase; beta-lactamase domain protein; KEGG: rfr:Rfer_3446 beta-lactamase-like
YP_969166.1	PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; tryptophan halogenase; KEGG: bja:bll2502 hypothetical protein
YP_969167.1	PFAM: regulatory protein, MarR; KEGG: reu:Reut_A0565 regulatory protein, MarR
YP_969168.1	PFAM: uncharacterized protein UPF0065; KEGG: pol:Bpro_3116 twin-arginine translocation pathway signal
YP_969169.1	TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: ppu:PP_2556 chromate transporter
YP_969170.1	PFAM: glutathione S-transferase, N-terminal domain; glutathione S-transferase, C-terminal domain; KEGG: bcn:Bcen_1203 glutathione S-transferase-like
YP_969171.1	involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate
YP_969172.1	PFAM: protein of unknown function DUF484; KEGG: rfr:Rfer_3443 hypothetical protein
YP_969173.1	PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: rfr:Rfer_3442 phage integrase
YP_969174.1	PFAM: protein of unknown function DUF187; KEGG: rso:RS01950 hypothetical protein
YP_969175.1	PFAM: chemotaxis sensory transducer; KEGG: rfr:Rfer_3609 methyl-accepting chemotaxis sensory transducer
YP_969177.1	SMART: PUA domain containing protein; KEGG: rfr:Rfer_3440 PUA
YP_969178.1	KEGG: pfl:PFL_1902 sensory box-containing diguanylate cyclase, putative; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; SMART: PAS domain containing protein
YP_969179.1	PFAM: cobalamin synthesis protein, P47K; cobalamin synthesis CobW domain protein; KEGG: pol:Bpro_1063 cobalamin synthesis protein, P47K
YP_969180.1	TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger, DksA/TraR C4-type; KEGG: pol:Bpro_1064 transcriptional regulators, TraR/DksA family
YP_969181.1	KEGG: pol:Bpro_1065 hypothetical protein
YP_969182.1	heat shock protein involved in degradation of misfolded proteins
YP_969183.1	heat shock protein involved in degradation of misfolded proteins
YP_969184.1	MraZ; UPF0040; crystal structure shows similarity to AbrB
YP_969185.1	TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: rfr:Rfer_3433 methyltransferase
YP_969186.1	PFAM: cell division protein FtsL; KEGG: pol:Bpro_1068 cell division protein, FtsL -like
YP_969187.1	PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; KEGG: pol:Bpro_1069 peptidoglycan glycosyltransferase
YP_969188.1	involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate
YP_969189.1	TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; cytoplasmic peptidoglycan synthetases domain protein; Mur ligase, middle domain protein; KEGG: pol:Bpro_1071 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase
YP_969190.1	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
YP_969191.1	TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase; PFAM: cytoplasmic peptidoglycan synthetases domain protein; Mur ligase, middle domain protein; KEGG: rfr:Rfer_3427 UDP-N-acetylmuramoylalanine--D-glutamate ligase
YP_969192.1	TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: pol:Bpro_1074 cell cycle protein
YP_969193.1	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis
YP_969194.1	Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis
YP_969195.1	D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli
YP_969196.1	PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein, FtsQ-type; KEGG: rfr:Rfer_3422 cell division protein FtsQ
YP_969197.1	PFAM: cell division protein FtsA; KEGG: pol:Bpro_1079 cell division protein FtsA
YP_969198.1	TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ, GTPase; Tubulin/FtsZ domain protein; KEGG: pol:Bpro_1080 cell division protein FtsZ
YP_969199.1	zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis
YP_969200.1	KEGG: rfr:Rfer_3415 hypothetical protein
YP_969201.1	required for the synthesis of the hydromethylpyrimidine moiety of thiamine
YP_969202.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rfr:Rfer_2029 methyl-accepting chemotaxis sensory transducer
YP_969203.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rfr:Rfer_2354 methyl-accepting chemotaxis sensory transducer
YP_969204.1	KEGG: rfr:Rfer_2431 integral membrane protein-like
YP_969205.1	endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity
YP_969206.1	PFAM: phosphatidate cytidylyltransferase; KEGG: pol:Bpro_1084 phosphatidate cytidylyltransferase
YP_969207.1	PFAM: phospholipid/glycerol acyltransferase; KEGG: pol:Bpro_1085 phospholipid/glycerol acyltransferase
YP_969208.1	PFAM: uncharacterized protein UPF0065; KEGG: rme:Rmet_4047 uncharacterized protein UPF0065
YP_969209.1	PFAM: Cupin 2, conserved barrel domain protein; KEGG: pol:Bpro_3856 cupin 2, conserved barrel
YP_969210.1	PFAM: HpcH/HpaI aldolase; KEGG: pol:Bpro_3855 HpcH/HpaI aldolase
YP_969211.1	PFAM: regulatory protein, IclR; KEGG: ecs:ECs0401 transcriptional regulator for mhp operon
YP_969212.1	TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: glycosyl transferase, family 51; KEGG: rfr:Rfer_3419 monofunctional biosynthetic peptidoglycan transglycosylase
YP_969213.1	AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate
YP_969214.1	TIGRFAM: TonB family protein; KEGG: pol:Bpro_1088 TonB-like
YP_969215.1	PFAM: ribonuclease II; KEGG: pol:Bpro_1089 ribonuclease II
YP_969216.1	PFAM: O-antigen polymerase; KEGG: pol:Bpro_4672 O-antigen polymerase
YP_969217.1	PFAM: protein of unknown function UPF0227; KEGG: rfr:Rfer_3375 protein of unknown function UPF0227
YP_969218.1	TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: pol:Bpro_1091 rod shape-determining protein RodA
YP_969219.1	PFAM: transposase, IS4 family protein; KEGG: cvi:CV0957 TIS1421-transposase protein B
YP_969220.1	KEGG: rso:RSp0990 probable TIS1421-transposase orfA protein
YP_969221.1	catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia
YP_969222.1	PFAM: peptidase U62, modulator of DNA gyrase; KEGG: rfr:Rfer_3369 peptidase U62, modulator of DNA gyrase
YP_969224.1	catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive
YP_969225.1	KEGG: rfr:Rfer_3441 hypothetical protein
YP_969226.1	TIGRFAM: UDP-N-acetylmuramate; PFAM: cytoplasmic peptidoglycan synthetase domain protein; cytoplasmic peptidoglycan synthetases domain protein; Mur ligase, middle domain protein; KEGG: rfr:Rfer_3356 UDP-N-acetylmuramate
YP_969227.1	KEGG: pol:Bpro_1097 hypothetical protein
YP_969228.1	PFAM: Redoxin domain protein; KEGG: pol:Bpro_1098 thioredoxin family protein, putative
YP_969229.1	TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: pol:Bpro_1099 acetyl-CoA carboxylase, biotin carboxyl carrier protein
YP_969230.1	TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: rfr:Rfer_3352 acetyl-CoA carboxylase, biotin carboxylase
YP_969231.1	methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype
YP_969232.1	TIGRFAM: MJ0042 family finger-like protein; KEGG: rme:Rmet_3067 zinc finger/thioredoxin putative
YP_969233.1	PFAM: PfkB domain protein; KEGG: pol:Bpro_1103 PfkB
YP_969234.1	KEGG: rfr:Rfer_3349 histone protein
YP_969235.1	Catalyzes the rate-limiting step in dNTP synthesis
YP_969236.1	Catalyzes the rate-limiting step in dNTP synthesis
YP_969237.1	PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; KEGG: pol:Bpro_1109 negative regulator of AmpC, AmpD
YP_969238.1	PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: pol:Bpro_1110 two component, sigma54 specific, transcriptional regulator, fis family
YP_969239.1	PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; KEGG: pol:Bpro_1111 periplasmic sensor signal transduction histidine kinase
YP_969240.1	KEGG: pen:PSEEN4682 hypothetical protein
YP_969241.1	PFAM: cytochrome c assembly protein; KEGG: rfr:Rfer_3343 cytochrome c assembly protein
YP_969242.1	KEGG: pol:Bpro_1114 signal recognition particle protein; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54, G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54, helical bundle; SMART: AAA ATPase
YP_969243.1	necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space
YP_969244.1	PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: pol:Bpro_1117 two component, sigma54 specific, transcriptional regulator, fis family
YP_969245.1	KEGG: rfr:Rfer_2787 hypothetical protein
YP_969246.1	PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; KEGG: pol:Bpro_1119 periplasmic sensor signal transduction histidine kinase
YP_969247.1	catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A)
YP_969248.1	KEGG: rfr:Rfer_3366 hypothetical protein
YP_969249.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mlo:mlr5225 dibenzothiophene desulfurization enzyme
YP_969250.1	PFAM: luciferase family protein; KEGG: bcn:Bcen_5789 luciferase-like
YP_969251.1	PFAM: NADPH-dependent FMN reductase; KEGG: bcn:Bcen_5790 FMN reductase
YP_969253.1	PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: bur:Bcep18194_C7716 sigma54 specific transcriptional regulator with PAS sensor, fis family
YP_969254.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rfr:Rfer_1573 enoyl-CoA hydratase/isomerase
YP_969255.1	PFAM: peptidase M61 domain protein; KEGG: pol:Bpro_1123 peptidase M61
YP_969256.1	KEGG: pol:Bpro_1124 putative thiol:disulphide interchange protein (periplasmic)
YP_969257.1	TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase, FAD-binding; KEGG: rfr:Rfer_1576 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family
YP_969258.1	PFAM: MOSC domain containing protein; MOSC domain protein beta barrel domain protein; KEGG: pol:Bpro_1126 MOSC-like beta barrel
YP_969259.1	TIGRFAM: GTP-binding protein YchF; PFAM: GTP-binding protein, HSR1-related; Protein of unknown function DUF933; KEGG: pol:Bpro_1127 hypothetical protein
YP_969261.1	KEGG: rso:RSc0868 probable YopP/AvrRxv family protein
YP_969262.1	PFAM: CBS domain containing protein; HPP family protein+B94; KEGG: pol:Bpro_0211 CBS domain containing membrane protein
YP_969263.1	TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6, transmembrane; KEGG: rfr:Rfer_4018 RarD protein
YP_969264.1	KEGG: pol:Bpro_1129 hypothetical protein
YP_969265.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: abo:ABO_0716 GGDEF domain protein
YP_969266.1	TIGRFAM: putative TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase, DuS; KEGG: pol:Bpro_1130 dihydrouridine synthase TIM-barrel protein nifR3
YP_969267.1	PFAM: helix-turn-helix, Fis-type; KEGG: pol:Bpro_1131 transcriptional regulator, fis family
YP_969268.1	involved in de novo purine biosynthesis
YP_969269.1	KEGG: rso:RSc2775 probable harpin-related protein
YP_969270.1	Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway
YP_969271.1	PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: pol:Bpro_1134 putative phosphomethylpyrimidine kinase
YP_969272.1	PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: pol:Bpro_1135 rubredoxin-type Fe(Cys)4 protein
YP_969273.1	PFAM: response regulator receiver; KEGG: rfr:Rfer_1371 response regulator receiver domain protein
YP_969274.1	PFAM: response regulator receiver; KEGG: pol:Bpro_1137 response regulator receiver domain protein (CheY-like)
YP_969275.1	PFAM: CheW domain protein; KEGG: pol:Bpro_1138 CheW-like protein
YP_969276.1	PFAM: chemotaxis sensory transducer; KEGG: pol:Bpro_1139 methyl-accepting chemotaxis sensory transducer
YP_969277.1	PFAM: response regulator receiver; CheW domain protein; ATP-binding region, ATPase domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; KEGG: pol:Bpro_1140 CheA signal transduction histidine kinase
YP_969278.1	PFAM: DNA photolyase, FAD-binding; DNA photolyase domain protein; KEGG: bxe:Bxe_B2844 deoxyribodipyrimidine photolyase
YP_969279.1	PFAM: protein of unknown function DUF179; KEGG: pol:Bpro_1142 protein of unknown function DUF179
YP_969280.1	similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function
YP_969281.1	PFAM: phosphoribosyltransferase; KEGG: rfr:Rfer_1379 phosphoribosyltransferase
YP_969282.1	catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis
YP_969283.1	PFAM: amidohydrolase; KEGG: pol:Bpro_1146 allantoinase
YP_969284.1	PFAM: phospholipid/glycerol acyltransferase; KEGG: pol:Bpro_1147 phospholipid/glycerol acyltransferase
YP_969285.1	PFAM: ABC transporter-related protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rfr:Rfer_1595 ABC transporter-related protein
YP_969286.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rfr:Rfer_1594 binding-protein-dependent transport systems inner membrane component
YP_969287.1	TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: sal:Sala_2404 arsenate reductase
YP_969288.1	KEGG: pol:Bpro_1330 type II secretion system protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase
YP_969289.1	TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: pol:Bpro_1329 type II and III secretion system protein
YP_969290.1	PFAM: type II secretion system protein N; KEGG: rfr:Rfer_0541 putative general secretory pathway N transmembrane protein
YP_969291.1	KEGG: pol:Bpro_1327 hypothetical protein
YP_969292.1	KEGG: pol:Bpro_1326 hypothetical protein
YP_969293.1	PFAM: General secretion pathway protein K; KEGG: pol:Bpro_1325 general secretion pathway protein K
YP_969294.1	KEGG: pol:Bpro_1324 methylation
YP_969295.1	TIGRFAM: general secretion pathway protein I; PFAM: type II secretion system protein I/J; KEGG: pol:Bpro_1323 general secretion pathway protein I
YP_969296.1	TIGRFAM: general secretion pathway protein H; KEGG: rfr:Rfer_0535 general secretion pathway protein H
YP_969297.1	TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: rfr:Rfer_0534 general secretion pathway protein G
YP_969298.1	KEGG: pol:Bpro_1320 hypothetical protein
YP_969299.1	PFAM: Phosphoglycerate mutase; KEGG: pol:Bpro_0739 phosphoglycerate mutase
YP_969300.1	TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS; KEGG: pol:Bpro_0740 cobalamin 5'-phosphate synthase
YP_969301.1	threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway
YP_969302.1	PFAM: OsmC family protein; KEGG: rfr:Rfer_0732 OsmC-like protein
YP_969303.1	KEGG: pol:Bpro_0745 putative ubiquinone biosynthesis protein
YP_969304.1	PFAM: porin, Gram-negative type; KEGG: pol:Bpro_3679 porin, gram-negative type
YP_969305.1	PFAM: porin, Gram-negative type; KEGG: rme:Rmet_4834 porin, gram-negative type
YP_969306.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_2112 binding-protein-dependent transport systems inner membrane component
YP_969307.1	KEGG: pol:Bpro_0749 peptidase M20D, amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein
YP_969308.1	PFAM: extracellular solute-binding protein, family 5; KEGG: pol:Bpro_2113 extracellular solute-binding protein, family 5
YP_969309.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_2114 binding-protein-dependent transport systems inner membrane component
YP_969310.1	KEGG: pol:Bpro_2115 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter-related protein; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase
YP_969311.1	KEGG: pol:Bpro_2116 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter-related protein; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase
YP_969312.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: tbd:Tbd_1620 chemotaxis sensory transducer
YP_969313.1	PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: pol:Bpro_0750 transcriptional regulator, RpiR family
YP_969314.1	catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate
YP_969315.1	KEGG: pol:Bpro_0752 transaldolase; TIGRFAM: transaldolase; PFAM: Transaldolase
YP_969316.1	functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family
YP_969317.1	60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth
YP_969318.1	PFAM: chaperonin Cpn10; KEGG: rfr:Rfer_1132 chaperonin Cpn10
YP_969319.1	KEGG: eba:ebA1563 hypothetical protein
YP_969320.1	KEGG: dar:Daro_2389 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase, type II; Nucleotidyl transferase; Cupin 2, conserved barrel domain protein
YP_969321.1	PFAM: UDP-glucose/GDP-mannose dehydrogenase; KEGG: msu:MS1501 WecC protein
YP_969322.1	PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: pae:PA3158 probable oxidoreductase WpbB
YP_969323.1	PFAM: transferase hexapeptide repeat containing protein; KEGG: bbr:BB0154 probable acetyltransferase
YP_969324.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: cvi:CV4124 probable aminotransferase
YP_969325.1	PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: tth:TTC0285 UDP-N-acetylglucosamine 2-epimerase
YP_969326.1	PFAM: ABC-2 type transporter; KEGG: pfl:PFL_5495 ABC-2 type transporte
YP_969327.1	PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: noc:Noc_1228 ABC transporter, ATPase subunit
YP_969328.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: nph:NP5122A homolog 11 to S-adenosylmethionine-dependent methyltransferase 3
YP_969329.1	PFAM: glycosyl transferase, group 1; KEGG: ctc:CTC02266 glycosyl transferase
YP_969330.1	PFAM: glycosyl transferase, group 1; KEGG: ade:Adeh_2772 glycosyl transferase, group 1
YP_969331.1	TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase, class-II; asparagine synthase; KEGG: bbr:BB0136 putative asparagine synthetase
YP_969332.1	PFAM: glycosyl transferase, group 1; KEGG: chu:CHU_2781 A-glycosyltransferase-related protein, glycosyltransferase family 4 protein
YP_969333.1	TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase, class-II; asparagine synthase; KEGG: bbr:BB0142 putative glutamine amidotransferase
YP_969334.1	KEGG: sth:STH1376 hypothetical protein
YP_969335.1	PFAM: glycosyl transferase, group 1; KEGG: eba:ebA1527 mannosyltransferase
YP_969336.1	PFAM: glycosyl transferase, family 2; glycosyl transferase, group 1; KEGG: eba:ebA1565 glycosyl transferase
YP_969337.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: eba:ebA1575 hypothetical protein
YP_969338.1	glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate
YP_969339.1	catalyzes the first step in pyrimidine degradation: the NADPH-dependent reduction of uracil and thymine to the corresponding 5,6-dihydropyrimidines
YP_969340.1	PFAM: permease for cytosine/purines, uracil, thiamine, allantoin; KEGG: ccr:CC2347 cytosine/purines/uracil/thiamine/allantoin permease family protein
YP_969341.1	catalyzes the hydrolytic cleavage of hydantoin with aromatic side chains at the 5'position
YP_969342.1	KEGG: bcn:Bcen_5723 amidase, hydantoinase/carbamoylase; TIGRFAM: amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20; peptidase dimerisation domain protein
YP_969343.1	PFAM: Peptidoglycan-binding domain 1 protein; KEGG: mfa:Mfla_1720 hypothetical protein
YP_969346.1	TIGRFAM: cytidyltransferase-related domain; PFAM: NUDIX hydrolase; cytidylyltransferase; KEGG: xcv:XCV0734 nicotinamide-nucleotide adenylyltransferase
YP_969347.1	KEGG: ade:Adeh_0285 NAD+ synthetase; TIGRFAM: NAD+ synthetase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; NAD+ synthase
YP_969348.1	catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate
YP_969349.1	KEGG: rpb:RPB_2359 hypothetical protein
YP_969350.1	PFAM: protein of unknown function DUF1328; KEGG: pol:Bpro_0066 protein of unknown function DUF1328
YP_969351.1	catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase
YP_969352.1	PFAM: lipid A biosynthesis acyltransferase; KEGG: rfr:Rfer_3881 putative acyltransferase
YP_969353.1	PFAM: lipid A biosynthesis acyltransferase; KEGG: pol:Bpro_0769 lipid A biosynthesis acyltransferase
YP_969354.1	PFAM: alpha/beta hydrolase fold; KEGG: rfr:Rfer_3189 alpha/beta hydrolase
YP_969355.1	HSR1-related protein; binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential
YP_969356.1	PFAM: cytochrome c, class I; KEGG: pol:Bpro_0772 cytochrome c, class I
YP_969357.1	PFAM: ResB family protein; KEGG: pol:Bpro_0773 ResB-like
YP_969358.1	PFAM: cytochrome c assembly protein; KEGG: pol:Bpro_0774 cytochrome c assembly protein
YP_969359.1	in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ
YP_969360.1	PFAM: Ferric reductase domain protein transmembrane component, N-terminal domain; KEGG: pol:Bpro_0776 ferric reductase-like transmembrane component-like
YP_969362.1	KEGG: pst:PSPTO_0478 hypothetical protein
YP_969363.1	PFAM: beta-lactamase domain protein; KEGG: reu:Reut_A0043 beta-lactamase-like
YP_969364.1	TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: pol:Bpro_0777 diaminopimelate decarboxylase
YP_969365.1	KEGG: rso:RSc2978 probable proline-rich transmembrane protein
YP_969366.1	PFAM: Frataxin family protein; KEGG: rfr:Rfer_2917 frataxin-like
YP_969367.1	KEGG: rfr:Rfer_2918 penicillin-binding protein 1A; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase
YP_969368.1	TIGRFAM: type IV pilus assembly protein PilM; KEGG: pol:Bpro_0781 type IV pilus assembly protein PilM
YP_969369.1	PFAM: Fimbrial assembly family protein; KEGG: rfr:Rfer_2920 fimbrial assembly
YP_969370.1	PFAM: Pilus assembly protein, PilO; KEGG: pol:Bpro_0783 pilus assembly protein, PilO
YP_969371.1	PFAM: Pilus assembly protein, PilQ; KEGG: pol:Bpro_0784 pilus assembly protein, PilQ
YP_969372.1	TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB, short N-terminal domain; KEGG: rfr:Rfer_2923 type II and III secretion system protein
YP_969373.1	PFAM: Ig domain protein, group 1 domain protein; KEGG: rfr:Rfer_2924 Ig-like, group 1
YP_969374.1	PFAM: shikimate kinase; KEGG: pol:Bpro_0786 shikimate kinase
YP_969375.1	catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis
YP_969376.1	dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate
YP_969377.1	PFAM: protein of unknown function DUF1415; KEGG: cvi:CV3207 hypothetical protein
YP_969378.1	KEGG: rfr:Rfer_2930 hypothetical protein
YP_969379.1	PFAM: protein of unknown function DUF1568; KEGG: rfr:Rfer_2932 protein of unknown function DUF1568
YP_969380.1	PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: rfr:Rfer_2933 glutamate synthase (ferredoxin)
YP_969381.1	glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate
YP_969382.1	PFAM: extracellular solute-binding protein, family 3; SMART: ionotropic glutamate receptor; KEGG: reu:Reut_A3014 extracellular solute-binding protein, family 3
YP_969383.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbr:BB2796 putative ABC transporter permease protein
YP_969384.1	PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: rfr:Rfer_2971 ABC transporter-related protein
YP_969385.1	PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_0793 ABC transporter-related protein
YP_969386.1	PFAM: protein of unknown function DUF140; KEGG: pol:Bpro_0794 protein of unknown function DUF140
YP_969387.1	PFAM: Mammalian cell entry related domain protein; KEGG: pol:Bpro_0795 mammalian cell entry related
YP_969388.1	PFAM: VacJ family lipoprotein; KEGG: rfr:Rfer_2938 VacJ-like lipoprotein
YP_969389.1	PFAM: toluene tolerance family protein; KEGG: rfr:Rfer_2939 toluene tolerance
YP_969390.1	KEGG: rfr:Rfer_2940 sulfate transporter/antisigma-factor antagonist STAS
YP_969391.1	PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_0799 ABC transporter-related protein
YP_969392.1	PFAM: ABC-2 type transporter; KEGG: pol:Bpro_0800 ABC-2
YP_969393.1	PFAM: BolA family protein; KEGG: pol:Bpro_0801 BolA-like protein
YP_969394.1	adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active
YP_969395.1	short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ
YP_969396.1	catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer
YP_969397.1	KEGG: rpd:RPD_0759 hypothetical protein
YP_969398.1	KEGG: reu:Reut_B3939 regulatory protein GntR, HTH:aminotransferase, class I and II
YP_969401.1	KEGG: mta:Moth_0176 hypothetical protein
YP_969402.1	catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis
YP_969403.1	catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis
YP_969404.1	with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide
YP_969405.1	catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide
YP_969406.1	KEGG: rso:RS01997 hypothetical signal peptide protein
YP_969407.1	KEGG: rxy:Rxyl_2672 hypothetical protein
YP_969408.1	KEGG: rme:Rmet_4161 putative transmembrane protein
YP_969409.1	PFAM: glycosyl transferase, group 1; KEGG: rso:RSc2271 hypothetical protein
YP_969410.1	KEGG: rso:RSc2272 probable transmembrane protein
YP_969411.1	KEGG: rme:Rmet_4158 putative transmembrane protein
YP_969412.1	KEGG: rso:RSc2274 putative lipoprotein
YP_969413.1	PFAM: Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; KEGG: rso:RSc2275 putative signal peptide protein
YP_969414.1	KEGG: rso:RSc2276 putative signal peptide protein
YP_969415.1	TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: reu:Reut_B5595 UDP-glucose 4-epimerase
YP_969416.1	PFAM: sodium:dicarboxylate symporter; KEGG: bcn:Bcen_3614 sodium:dicarboxylate symporter
YP_969417.1	PFAM: Aldose 1-epimerase; KEGG: dar:Daro_2733 aldose 1-epimerase
YP_969418.1	catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase
YP_969419.1	PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers
YP_969420.1	catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis
YP_969421.1	KEGG: rfr:Rfer_2954 putative transmembrane protein
YP_969422.1	PFAM: Patatin; KEGG: rfr:Rfer_0908 patatin
YP_969423.1	PFAM: histidine triad (HIT) protein; KEGG: pol:Bpro_0813 histidine triad (HIT) protein
YP_969424.1	TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes
YP_969425.1	TIGRFAM: twin-arginine translocation protein, TatB subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: pol:Bpro_0815 twin-arginine translocation protein TatB
YP_969426.1	TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: pol:Bpro_0816 sec-independent protein translocase TatC
YP_969427.1	KEGG: xcv:XCV1055 Xanthomonas outer protein O
YP_969428.1	KEGG: ade:Adeh_0323 hypothetical protein
YP_969429.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pfl:PFL_6120 major facilitator family transporter
YP_969430.1	PFAM: protein of unknown function DUF34; KEGG: pol:Bpro_0818 protein of unknown function DUF34
YP_969432.1	PFAM: von Willebrand factor, type A; KEGG: pol:Bpro_3893 von Willebrand factor, type A
YP_969433.1	PFAM: protein of unknown function DUF58; KEGG: pol:Bpro_3892 protein of unknown function DUF58
YP_969434.1	PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; KEGG: pol:Bpro_3891 ATPase associated with various cellular activities, AAA_3
YP_969435.1	PFAM: peptidase S1 and S6, chymotrypsin/Hap; KEGG: pol:Bpro_3890 peptidase S1 and S6, chymotrypsin/Hap
YP_969436.1	PFAM: TatD-related deoxyribonuclease; KEGG: rfr:Rfer_3221 TatD-related deoxyribonuclease
YP_969437.1	KEGG: pol:Bpro_3884 hypothetical protein
YP_969438.1	KEGG: rfr:Rfer_3215 hypothetical protein
YP_969439.1	PFAM: type II secretion system protein E; General secretory system II, protein E domain protein; SMART: AAA ATPase; KEGG: rfr:Rfer_3214 type II secretion system protein E
YP_969440.1	PFAM: protein of unknown function DUF1468; KEGG: pol:Bpro_3881 protein of unknown function DUF1468
YP_969441.1	PFAM: protein of unknown function DUF112, transmembrane; KEGG: pol:Bpro_3880 protein of unknown function DUF112, transmembrane
YP_969443.1	PFAM: Integrase, catalytic region; KEGG: eba:ebA5932 transposase
YP_969444.1	KEGG: eba:ebA5933 transposition helper protein
YP_969445.1	KEGG: mxa:MXAN_5466 peptidase, S1E (streptogrisin A) subfamily
YP_969446.1	KEGG: rfr:Rfer_3214 type II secretion system protein E
YP_969448.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: eba:ebA1986 thioredoxin reductase
YP_969449.1	PFAM: protein of unknown function DUF6, transmembrane; Protein of unknown function DUF250; KEGG: pol:Bpro_3877 protein of unknown function DUF6, transmembrane
YP_969450.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bbr:BB3867 probable short-chain dehydrogenase
YP_969451.1	PFAM: histidine kinase, HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: bxe:Bxe_C1139 methyl-accepting chemotaxis sensory transducer, cache sensor
YP_969452.1	PFAM: Urease accessory protein UreD; KEGG: pol:Bpro_1414 urease accessory protein UreD
YP_969453.1	PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: sru:SRU_2518 putative cytidine and deoxycytidylate deaminase
YP_969454.1	KEGG: cyb:CYB_1943 Tat (twin-arginine translocation) pathway signal sequence domain protein
YP_969455.1	PFAM: 2OG-Fe(II) oxygenase; KEGG: aci:ACIAD0977 putative dioxygenase
YP_969456.1	stimulates the activities of the other two initiation factors, IF-2 and IF-3
YP_969459.1	PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: syf:Synpcc7942_1573 3-oxoacyl-(acyl-carrier protein) reductase
YP_969460.1	KEGG: rso:RS05350 AWR family protein
YP_969461.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rme:Rmet_0394 binding-protein-dependent transport systems inner membrane component
YP_969462.1	PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: rme:Rmet_0393 ABC transporter-related protein
YP_969463.1	KEGG: rme:Rmet_0392 twin-arginine translocation pathway signal
YP_969464.1	PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: mlo:mll2512 hypothetical protein
YP_969465.1	NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate
YP_969466.1	PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: reu:Reut_A3280 regulatory protein GntR, HTH:GntR, C-terminal
YP_969467.1	PFAM: Asp/Glu racemase; KEGG: bxe:Bxe_A1925 putative hydantoin racemase
YP_969468.1	PFAM: permease for cytosine/purines, uracil, thiamine, allantoin; KEGG: bxe:Bxe_A1924 nucleobase/cation symporter, NCS1 family
YP_969469.1	PFAM: regulatory protein GntR, HTH; GntR domain protein; Helix-turn-helix, type 11 domain protein; KEGG: pol:Bpro_1419 transcriptional regulator, GntR family
YP_969470.1	PFAM: histidine kinase, HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: rso:RSc3307 putative methyl-accepting chemotaxis transmembrane protein
YP_969471.1	involved in the transport of C4-dicarboxylates across the membrane
YP_969473.1	PFAM: Integrase, catalytic region; KEGG: eba:ebA5932 transposase
YP_969474.1	KEGG: eba:ebA5933 transposition helper protein
YP_969475.1	KEGG: pol:Bpro_1422 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase
YP_969476.1	KEGG: pst:PSPTO_0478 hypothetical protein
YP_969478.1	TIGRFAM: acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: pol:Bpro_1422 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase
YP_969479.1	putative bifunctional enzyme; OHCU decarboxylase catalyzes 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline to allantoin and allantoate amidohydrolase converts allantoate to (S)-ureidoglycolate and ammonia
YP_969480.1	PFAM: polysaccharide deacetylase; KEGG: pol:Bpro_1424 polysaccharide deacetylase
YP_969481.1	PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: pol:Bpro_1425 transcriptional regulator, GntR family
YP_969482.1	PFAM: MOFRL domain protein; KEGG: pol:Bpro_1434 hydroxypyruvate reductase
YP_969483.1	KEGG: net:Neut_1843 gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase
YP_969484.1	PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: bcn:Bcen_2208 transposase IS116/IS110/IS902
YP_969485.1	PFAM: Transthyretin; KEGG: pol:Bpro_1426 transthyretin
YP_969486.1	KEGG: bpm:BURPS1710b_0601 hypothetical protein
YP_969487.1	PFAM: protein of unknown function DUF182; KEGG: pol:Bpro_1429 protein of unknown function DUF182
YP_969488.1	PFAM: protein of unknown function DUF989; KEGG: pol:Bpro_1430 putative transmembrane protein
YP_969489.1	PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: rfr:Rfer_2030 diguanylate cyclase/phosphodiesterase
YP_969490.1	PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: bpm:BURPS1710b_A1463 DNA-binding response regulator, LuxR family
YP_969491.1	PFAM: ATP-binding region, ATPase domain protein; histidine kinase, dimerisation and phosphoacceptor region; Cache, type 2 domain protein; KEGG: reu:Reut_A3418 ATP-binding region, ATPase-like:histidine kinase, dimerisation and phosphoacceptor region
YP_969492.1	TIGRFAM: putative endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: dge:Dgeo_0230 YjgF-like protein protein
YP_969493.1	PFAM: aminotransferase, class V; KEGG: vpa:VPA1513 ScrA (aminotransferase)
YP_969494.1	PFAM: porin, Gram-negative type; KEGG: rso:RS00714 probable porin precursor transmembrane protein
YP_969495.1	KEGG: noc:Noc_2021 PAS sensor diguanylate cyclase/phophodiesterase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_969497.1	PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: pol:Bpro_1480 xanthine dehydrogenase
YP_969498.1	PFAM: ferredoxin; molybdopterin dehydrogenase, FAD-binding; [2Fe-2S]-binding domain protein; CO dehydrogenase flavoprotein domain protein; KEGG: pol:Bpro_1481 molybdopterin dehydrogenase, FAD-binding
YP_969500.1	PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_1483 ABC transporter-related protein
YP_969501.1	PFAM: inner-membrane translocator; KEGG: pol:Bpro_1484 inner-membrane translocator
YP_969502.1	PFAM: inner-membrane translocator; KEGG: pol:Bpro_1485 inner-membrane translocator
YP_969503.1	PFAM: basic membrane lipoprotein; KEGG: pol:Bpro_1486 basic membrane lipoprotein
YP_969504.1	PFAM: Rieske [2Fe-2S] domain protein; KEGG: fal:FRAAL0416 vanillate O-demethylase oxygenase subunit
YP_969505.1	KEGG: rfr:Rfer_0242 hypothetical protein
YP_969506.1	KEGG: pol:Bpro_1487 adenosine deaminase; TIGRFAM: adenosine deaminase; PFAM: adenosine/AMP deaminase
YP_969507.1	PFAM: peptidase S45, penicillin amidase; KEGG: dra:DRA0255 aculeacin A acylase
YP_969508.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: rme:Rmet_5796 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
YP_969509.1	PFAM: basic membrane lipoprotein; KEGG: rfr:Rfer_3296 basic membrane lipoprotein
YP_969510.1	Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis
YP_969513.1	PFAM: protein of unknown function, zinc metallopeptidase putative; KEGG: pol:Bpro_1515 protein of unknown function, zinc metallopeptidase putative
YP_969514.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: pol:Bpro_1516 DEAD/DEAH box helicase-like
YP_969515.1	hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP
YP_969516.1	PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: rso:RS00711 putative HNS-like transcription regulator protein
YP_969517.1	Catalyzes the conversion of citrate to isocitrate
YP_969518.1	KEGG: rfr:Rfer_2893 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_969519.1	KEGG: rfr:Rfer_2893 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_969520.1	PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; KEGG: pol:Bpro_3591 salicylate 1-monooxygenase
YP_969521.1	PFAM: tryptophan 2,3-dioxygenase; KEGG: pol:Bpro_3590 tryptophan 2,3-dioxygenase
YP_969522.1	TIGRFAM: kynureninase; PFAM: aminotransferase, class V; KEGG: pol:Bpro_3589 kynureninase
YP_969523.1	PFAM: cyclase family protein; KEGG: pol:Bpro_3588 putative cyclase
YP_969524.1	PFAM: regulatory protein, AsnC/Lrp family; KEGG: ppu:PP_1307 transcriptional regulator, AsnC family
YP_969525.1	PFAM: protein of unknown function UPF0153; KEGG: cvi:CV2850 probable ferredoxin
YP_969526.1	PFAM: FeoA family protein; KEGG: rso:RS03714 ferrous iron transport protein A
YP_969527.1	TIGRFAM: ferrous iron transport protein B; PFAM: GTP-binding protein, HSR1-related; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; nucleoside recognition domain protein; KEGG: rso:RSp0251 probable ferrous iron transport B transmembrane protein
YP_969528.1	KEGG: sma:SAV3919 hypothetical protein
YP_969529.1	catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation
YP_969530.1	catalyzes the formation of N-acetyl-l-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine
YP_969531.1	KEGG: pol:Bpro_3571 hypothetical protein
YP_969532.1	malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate
YP_969533.1	binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase
YP_969534.1	TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; KEGG: pol:Bpro_3569 integral membrane protein MviN
YP_969535.1	KEGG: pol:Bpro_3568 hypothetical protein
YP_969536.1	catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis
YP_969537.1	PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase, alpha subunit; KEGG: pol:Bpro_3712 procollagen-proline, 2-oxoglutarate-4-dioxygenase
YP_969538.1	PFAM: protein of unknown function DUF328; KEGG: rfr:Rfer_2372 protein of unknown function DUF328
YP_969539.1	TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: pol:Bpro_3660 ribonuclease, Rne/Rng family
YP_969540.1	KEGG: rfr:Rfer_1721 pseudouridine synthase, RluD; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase
YP_969541.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pol:Bpro_3658 HAD-superfamily hydrolase, subfamily IA, variant 1
YP_969542.1	PFAM: Rieske [2Fe-2S] domain protein; KEGG: pol:Bpro_3657 Rieske (2Fe-2S) region
YP_969543.1	PFAM: peptidase S49; KEGG: rfr:Rfer_1724 peptidase S49
YP_969544.1	KEGG: pol:Bpro_3655 putative transmembrane protein
YP_969545.1	TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: pol:Bpro_3654 maf protein
YP_969546.1	PFAM: protein of unknown function DUF177; KEGG: rfr:Rfer_1727 protein of unknown function DUF177
YP_969547.1	some L32 proteins have zinc finger motifs consisting of CXXC while others do not
YP_969548.1	involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY
YP_969549.1	FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs
YP_969550.1	TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase domain protein; KEGG: pol:Bpro_3648 malonyl CoA-acyl carrier protein transacylase
YP_969551.1	TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: rfr:Rfer_1732 3-oxoacyl-(acyl-carrier-protein) reductase
YP_969552.1	carries the fatty acid chain in fatty acid biosynthesis
YP_969553.1	PFAM: beta-ketoacyl synthase; KEGG: rfr:Rfer_1734 beta-ketoacyl synthase
YP_969554.1	KEGG: rfr:Rfer_1735 hypothetical protein
YP_969555.1	Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response
YP_969556.1	PFAM: Anti sigma-E protein RseA family protein; KEGG: rfr:Rfer_1737 anti sigma-E protein, RseA, Burkholderiaceae specific
YP_969557.1	KEGG: rfr:Rfer_1738 putative sigma E regulatory protein, MucB/RseB
YP_969558.1	TIGRFAM: protease Do; PFAM: peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: pol:Bpro_3640 peptidase S1C, Do
YP_969559.1	binds to the ribosome on the universally-conserved alpha-sarcin loop
YP_969560.1	KEGG: rfr:Rfer_1741 peptidase S26A, signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24, S26A and S26B
YP_969561.1	KEGG: rfr:Rfer_1742 putative transmembrane protein
YP_969562.1	cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity
YP_969563.1	TIGRFAM: small GTP-binding protein; GTP-binding protein Era; PFAM: GTP-binding protein, HSR1-related; KH, type 2 domain protein; Miro domain protein; KEGG: rfr:Rfer_1744 GTP-binding protein Era
YP_969564.1	TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O, RecO; KEGG: rfr:Rfer_1751 DNA repair protein RecO
YP_969565.1	involved in the de novo synthesis of pyridoxine (Vitamin B6)
YP_969566.1	KEGG: rfr:Rfer_1754 beta-N-acetylhexosaminidase; TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: glycoside hydrolase, family 3 domain protein; 4'-phosphopantetheinyl transferase
YP_969567.1	KEGG: bcn:Bcen_4476 hypothetical protein
YP_969568.1	KEGG: pen:PSEEN0164 hypothetical protein
YP_969569.1	class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1
YP_969571.1	KEGG: bur:Bcep18194_C7394 hypothetical protein
YP_969572.1	PFAM: glycosyl transferase, group 1; KEGG: pfo:Pfl_2019 glycosyl transferase, group 1
YP_969573.1	KEGG: bja:blr2372 hypothetical protein
YP_969574.1	PFAM: sugar transferase; KEGG: rme:Rmet_2718 sugar transferase
YP_969575.1	PFAM: glycosyl transferase, group 1; KEGG: rme:Rmet_2717 glycosyl transferase, group 1
YP_969576.1	PFAM: peptidase S16, lon domain protein; KEGG: pol:Bpro_3619 peptidase S16, lon-like
YP_969577.1	PFAM: protein of unknown function YGGT; KEGG: rfr:Rfer_1785 protein of unknown function YGGT
YP_969578.1	TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; KEGG: pol:Bpro_3618 acetyl-CoA carboxylase, carboxyl transferase, beta subunit
YP_969579.1	catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis
YP_969580.1	catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate
YP_969581.1	PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: rfr:Rfer_1789 phosphoribosylanthranilate isomerase
YP_969582.1	mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability
YP_969583.1	KEGG: pol:Bpro_3613 putative transmembrane protein
YP_969584.1	catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde
YP_969585.1	PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mlo:mlr3115 short chain dehydrogenase
YP_969586.1	catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis
YP_969587.1	catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D
YP_969588.1	dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate
YP_969589.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: pol:Bpro_3607 transcriptional regulator, LysR family
YP_969590.1	chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion
YP_969591.1	heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria
YP_969592.1	with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor
YP_969593.1	binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21
YP_969594.1	KEGG: rfr:Rfer_2194 putative primosomal replication protein
YP_969595.1	binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit
YP_969596.1	in Escherichia coli this protein is wrapped around the base of the L1 stalk
YP_969597.1	KEGG: rfr:Rfer_2580 replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase, N-terminal domain protein; DnaB domain protein helicase, C-terminal domain protein; SMART: AAA ATPase
YP_969598.1	KEGG: nmu:Nmul_A1081 hypothetical protein
YP_969599.1	PFAM: PhoH family protein; SMART: Nucleotide binding protein, PINc; KEGG: pol:Bpro_2186 PhoH-like protein
YP_969600.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: pol:Bpro_2187 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
YP_969601.1	PFAM: protein of unknown function DUF498; KEGG: pol:Bpro_2188 protein of unknown function DUF498
YP_969602.1	broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor
YP_969603.1	catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine
YP_969604.1	catalyzes the formation of L-threonine from O-phospho-L-homoserine
YP_969605.1	TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: pol:Bpro_2192 molybdopterin-guanine dinucleotide biosynthesis protein B
YP_969606.1	TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; MoeA domain protein, domain I and II; MoeA domain protein, domain IV; KEGG: pol:Bpro_2193 MoeA-like, domain I and II
YP_969607.1	TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein; KEGG: rfr:Rfer_1916 molybdopterin converting factor, subunit 1
YP_969608.1	TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; KEGG: pol:Bpro_2195 dihydrodipicolinate synthase
YP_969612.1	KEGG: rfr:Rfer_1755 hypothetical protein
YP_969613.1	PFAM: molybdopterin biosynthesis MoaE; KEGG: rfr:Rfer_1917 molybdopterin biosynthesis MoaE
YP_969614.1	PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: pol:Bpro_2201 ATPase AAA-2
YP_969615.1	KEGG: rfr:Rfer_2034 hypothetical protein
YP_969616.1	PFAM: aldehyde dehydrogenase; KEGG: mlo:mlr4051 probable coniferyl aldehyde dehydrogenase
YP_969617.1	PFAM: GCN5-related N-acetyltransferase; KEGG: rfr:Rfer_2769 GCN5-related N-acetyltransferase
YP_969618.1	PFAM: methyltransferase small; KEGG: eba:ebA5030 hypothetical protein
YP_969619.1	KEGG: xac:XAC0456 hypothetical protein
YP_969620.1	PFAM: dihydrouridine synthase, DuS; KEGG: pol:Bpro_3425 dihydrouridine synthase, DuS
YP_969621.1	PFAM: phospholipase D/Transphosphatidylase; KEGG: pol:Bpro_4230 phospholipase D/transphosphatidylase
YP_969622.1	catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate
YP_969623.1	primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence
YP_969624.1	PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH, type 1, domain protein; SMART: KH domain protein; KEGG: rfr:Rfer_1489 3' exoribonuclease
YP_969625.1	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rfr:Rfer_1490 alcohol dehydrogenase, zinc-binding
YP_969626.1	Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate
YP_969627.1	TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: pol:Bpro_3257 preprotein translocase, SecG subunit
YP_969628.1	PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; KEGG: pol:Bpro_3256 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
YP_969629.1	The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen
YP_969630.1	KEGG: pol:Bpro_3254 NADH (or F420H2) dehydrogenase, subunit C; TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone), 30 kDa subunit
YP_969631.1	Catalyzes the transfer of electrons from NADH to quinone
YP_969632.1	TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone), 24 kDa subunit; KEGG: pol:Bpro_3252 NADH-quinone oxidoreductase, E subunit
YP_969633.1	KEGG: pol:Bpro_3251 NADH-quinone oxidoreductase, F subunit; TIGRFAM: NADH-quinone oxidoreductase, F subunit; PFAM: Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit
YP_969634.1	Catalyzes the transfer of electrons from NADH to ubiquinone
YP_969635.1	PFAM: respiratory-chain NADH dehydrogenase, subunit 1; KEGG: pol:Bpro_3249 respiratory-chain NADH dehydrogenase, subunit 1
YP_969636.1	Catalyzes the transfer of electrons from NADH to quinone
YP_969637.1	PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 6; KEGG: rfr:Rfer_1502 NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
YP_969638.1	PFAM: NADH-ubiquinone oxidoreductase, chain 4L; KEGG: rfr:Rfer_1503 NADH-ubiquinone oxidoreductase, chain 4L
YP_969639.1	KEGG: pol:Bpro_3245 proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I)
YP_969640.1	KEGG: pol:Bpro_3244 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I)
YP_969641.1	Catalyzes the transfer of electrons from NADH to quinone
YP_969642.1	KEGG: pol:Bpro_3242 putative transmembrane protein
YP_969643.1	PFAM: protein of unknown function DUF1178; KEGG: pol:Bpro_3240 protein of unknown function DUF1178
YP_969644.1	PFAM: ABC transporter, transmembrane region; ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_3238 ABC transporter-related protein
YP_969645.1	PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: reu:Reut_A3371 ABC transporter-related protein
YP_969646.1	PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: bte:BTH_I3330 branched-chain amino acid ABC transporter, ATP-binding protein
YP_969647.1	KEGG: reu:Reut_A3369 extracellular ligand-binding receptor
YP_969648.1	KEGG: rso:RSc3342 putative substrate-binding periplasmic (pbp) ABC transporter protein
YP_969649.1	PFAM: inner-membrane translocator; KEGG: reu:Reut_A3368 inner-membrane translocator
YP_969650.1	PFAM: inner-membrane translocator; KEGG: reu:Reut_A3367 inner-membrane translocator
YP_969651.1	KEGG: pol:Bpro_3228 secreted hydrolase-like
YP_969652.1	PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: rfr:Rfer_1520 pyridoxal-5'-phosphate-dependent enzyme, beta subunit
YP_969653.1	PFAM: glycosyl transferase, family 2; KEGG: pcu:pc0452 hypothetical protein
YP_969654.1	PFAM: Collagen triple helix repeat; KEGG: bld:BLi00801 hypothetical protein
YP_969655.1	KEGG: mlo:mll1534 hypothetical protein
YP_969656.1	PFAM: protein of unknown function DUF214; KEGG: pol:Bpro_3224 protein of unknown function DUF214
YP_969657.1	PFAM: heat shock protein Hsp20; KEGG: cvi:CV1177 probable small heat shock protein
YP_969658.1	PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_3214 ABC transporter-related protein
YP_969659.1	KEGG: pol:Bpro_3212 tRNA delta(2)-isopentenylpyrophosphate transferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase
YP_969660.1	PFAM: 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein; KEGG: eca:ECA4449 hypothetical protein
YP_969661.1	PFAM: helix-turn-helix, HxlR type; KEGG: sbo:SBO_4232 hypothetical protein
YP_969662.1	KEGG: pol:Bpro_3210 hypothetical protein
YP_969663.1	PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: dar:Daro_0237 glycerophosphoryl diester phosphodiesterase
YP_969664.1	KEGG: pfl:PFL_3353 hypothetical protein
YP_969665.1	TIGRFAM: DNA mismatch repair protein MutL; PFAM: ATP-binding region, ATPase domain protein; DNA mismatch repair protein, C-terminal domain protein; KEGG: pol:Bpro_3209 DNA mismatch repair protein MutL
YP_969666.1	KEGG: pol:Bpro_3208 DedA protein (DSG-1 protein)
YP_969667.1	PFAM: alpha/beta hydrolase fold; KEGG: xcv:XCV1928 hydrolase of the alpha/beta fold superfamily
YP_969669.1	PFAM: Cupin 2, conserved barrel domain protein; KEGG: rme:Rmet_5777 cupin 2, conserved barrel
YP_969670.1	PFAM: cell wall hydrolase/autolysin; KEGG: pol:Bpro_3199 N-acetylmuramoyl-L-alanine amidase
YP_969671.1	PFAM: protein of unknown function UPF0079; KEGG: rfr:Rfer_3302 protein of unknown function UPF0079
YP_969672.1	TIGRFAM: putative iron-sulfur cluster binding protein; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; domain of unknown function DUF1730; KEGG: rfr:Rfer_3301 4Fe-4S cluster binding
YP_969673.1	PFAM: Auxin Efflux Carrier; KEGG: pol:Bpro_3195 auxin efflux carrier
YP_969674.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: pol:Bpro_3436 transcriptional regulator, LysR family
YP_969675.1	TIGRFAM: aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; KEGG: pho:PH0720 aspartate carbamoyltransferase catalytic chain
YP_969676.1	PFAM: protein of unknown function DUF81; KEGG: pca:Pcar_3013 hypothetical protein
YP_969677.1	PFAM: uncharacterized protein UPF0065; KEGG: pol:Bpro_3194 uncharacterized protein UPF0065
YP_969678.1	TIGRFAM: tyrosine recombinase XerD; PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: pol:Bpro_3191 tyrosine recombinase XerD
YP_969679.1	PFAM: uncharacterized protein UPF0065; KEGG: reu:Reut_A0058 hypothetical protein
YP_969680.1	PFAM: EAL domain protein; HDOD; KEGG: mfa:Mfla_1965 diguanylate phosphodiesterase (EAL domain)
YP_969681.1	PFAM: EAL domain protein; HDOD; KEGG: cvi:CV3451 putative signal transduction protein containing EAL and modified HD-GYP domains
YP_969682.1	PFAM: protein of unknown function DUF455; KEGG: pol:Bpro_3189 protein of unknown function DUF455
YP_969683.1	PFAM: transferase hexapeptide repeat containing protein; KEGG: rfr:Rfer_2653 transferase hexapeptide protein
YP_969684.1	PFAM: Hsp33 protein; KEGG: rfr:Rfer_2652 HSP33 protein
YP_969685.1	KEGG: pol:Bpro_3186 hypothetical protein
YP_969686.1	PFAM: Septum formation initiator; KEGG: rfr:Rfer_2651 septum formation initiator
YP_969687.1	enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis
YP_969690.1	PFAM: protein of unknown function DUF1330; KEGG: pol:Bpro_3183 protein of unknown function DUF1330
YP_969691.1	catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis
YP_969692.1	CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer
YP_969693.1	TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein; KEGG: rfr:Rfer_2647 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase
YP_969694.1	catalyzes the formation of dUMP from dUTP
YP_969695.1	PFAM: 17 kDa surface antigen; KEGG: pol:Bpro_3177 17 kDa surface antigen
YP_969696.1	KEGG: rfr:Rfer_2645 fkbp-type peptidyl-prolyl cis-trans isomerase
YP_969697.1	PFAM: Cupin 4 family protein; SMART: transcription factor jumonji, jmjC domain protein; KEGG: rfr:Rfer_2644 cupin 4
YP_969698.1	KEGG: rfr:Rfer_2643 hypothetical protein
YP_969699.1	KEGG: bma:BMA2255 lipoprotein, putative
YP_969700.1	PFAM: beta-lactamase domain protein; KEGG: pol:Bpro_3172 beta-lactamase-like
YP_969701.1	PFAM: NlpBDapX family lipoprotein; KEGG: rfr:Rfer_2096 NlpBDapX lipoprotein
YP_969702.1	catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis
YP_969703.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: pol:Bpro_3169 methyltransferase type 11
YP_969704.1	PFAM: major facilitator superfamily MFS_1; KEGG: pol:Bpro_3167 major facilitator superfamily MFS_1
YP_969705.1	decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling
YP_969706.1	PFAM: Lytic transglycosylase, catalytic; KEGG: pol:Bpro_3164 lytic transglycosylase, catalytic
YP_969707.1	decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling
YP_969708.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rfr:Rfer_2225 methyl-accepting chemotaxis sensory transducer
YP_969709.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rfr:Rfer_2507 methyl-accepting chemotaxis sensory transducer
YP_969710.1	TIGRFAM: pyridoxal kinase; PFAM: PfkB domain protein; Phosphomethylpyrimidine kinase type-1; KEGG: dge:Dgeo_0144 pyridoxal kinase
YP_969711.1	PFAM: Endoribonuclease L-PSP; KEGG: rfr:Rfer_2506 endoribonuclease L-PSP
YP_969714.1	KEGG: psb:Psyr_1160 similar to uncharacterized protein conserved in bacteria
YP_969715.1	KEGG: pfo:Pfl_3818 hypothetical protein
YP_969716.1	KEGG: hch:HCH_05093 hypothetical protein
YP_969717.1	TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; PFAM: beta-lactamase domain protein; ComEC/Rec2-related protein; KEGG: rfr:Rfer_2476 DNA internalization-related competence protein ComEC/Rec2
YP_969718.1	PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: pol:Bpro_3157 protein of unknown function DUF404
YP_969719.1	PFAM: protein of unknown function DUF403; KEGG: rfr:Rfer_2473 protein of unknown function DUF403
YP_969722.1	PFAM: S-adenosyl-L-homocysteine hydrolase; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: fra:Francci3_4092 S-adenosyl-L-homocysteine hydrolase
YP_969723.1	KEGG: mxa:MXAN_3926 hypothetical protein
YP_969724.1	KEGG: pol:Bpro_3456 hypothetical protein
YP_969725.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: pol:Bpro_3431 transcriptional regulator, LysR family
YP_969726.1	PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: pol:Bpro_3430 alpha/beta hydrolase fold-3
YP_969727.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: pol:Bpro_3429 secretion protein HlyD
YP_969728.1	TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: pol:Bpro_3428 hydrophobe/amphiphile efflux-1 HAE1
YP_969729.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: pol:Bpro_3427 RND efflux system, outer membrane lipoprotein, NodT
YP_969730.1	PFAM: aldehyde dehydrogenase; KEGG: pol:Bpro_0086 aldehyde dehydrogenase
YP_969732.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: bbr:BB1785 putative ferrisiderophore receptor
YP_969733.1	KEGG: bxe:Bxe_C0724 hypothetical protein
YP_969734.1	KEGG: pfl:PFL_0987 hypothetical protein
YP_969735.1	PFAM: PepSY-associated TM helix domain protein; KEGG: bbr:BB3604 putative iron uptake protein
YP_969736.1	KEGG: bbr:BB3605 putative iron uptake protein
YP_969737.1	PFAM: TonB-dependent receptor, plug; KEGG: rso:RSc0800 putative ferrisiderophore receptor signal peptide protein
YP_969738.1	KEGG: psb:Psyr_3813 type III effector HopAF1
YP_969739.1	TIGRFAM: bacterioferritin; PFAM: Ferritin, Dps family protein; KEGG: pol:Bpro_3046 bacterioferritin
YP_969740.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: pae:PA0139 alkyl hydroperoxide reductase subunit C
YP_969741.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutaredoxin; KEGG: ppu:PP_2440 alkyl hydroperoxide reductase, F subunit
YP_969742.1	PFAM: phosphoesterase; protein of unknown function DUF756; KEGG: bpm:BURPS1710b_A1577 phospholipase C
YP_969744.1	PFAM: restriction endonuclease; KEGG: pol:Bpro_3356 restriction endonuclease
YP_969746.1	PFAM: protein of unknown function DUF299; KEGG: pol:Bpro_3043 protein of unknown function DUF299
YP_969747.1	catalyzes the formation of phosphoenolpyruvate from pyruvate
YP_969748.1	KEGG: rso:RSc0548 hypothetical protein
YP_969749.1	PFAM: Na+/solute symporter; KEGG: rfr:Rfer_2192 Na+/solute symporter
YP_969750.1	KEGG: pol:Bpro_4141 hypothetical protein
YP_969751.1	KEGG: mxa:MXAN_2847 hypothetical protein
YP_969752.1	PFAM: peptidylprolyl isomerase, FKBP-type; KEGG: rfr:Rfer_1971 peptidylprolyl isomerase, FKBP-type
YP_969753.1	KEGG: pol:Bpro_3120 putative transcriptional regulator
YP_969754.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: pol:Bpro_2352 L-carnitine dehydratase/bile acid-inducible protein F
YP_969755.1	PFAM: protein of unknown function DUF6, transmembrane; KEGG: rso:RSc2109 probable transmembrane protein
YP_969756.1	PFAM: VirK family protein; KEGG: xac:XAC0435 VirK protein
YP_969757.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rfr:Rfer_0844 transcriptional regulator, LysR family
YP_969758.1	PFAM: dihydrodipicolinate synthetase; KEGG: mta:Moth_0631 dihydrodipicolinate synthetase
YP_969759.1	PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: bcn:Bcen_2208 transposase IS116/IS110/IS902
YP_969760.1	PFAM: uncharacterized protein UPF0065; KEGG: rme:Rmet_4073 uncharacterized protein UPF0065
YP_969761.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: bcn:Bcen_1530 short-chain dehydrogenase/reductase SDR
YP_969762.1	PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; KEGG: rfr:Rfer_0843 mandelate racemase/muconate lactonizing enzyme
YP_969763.1	KEGG: pst:PSPTO_5113 hypothetical protein
YP_969764.1	PFAM: transposase, IS4 family protein; KEGG: bxe:Bxe_C0489 putative transposase IS4
YP_969765.1	TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; NADP oxidoreductase, coenzyme F420-dependent; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE, N-terminal domain protein; Ketopantoate reductase ApbA/PanE, C-terminal domain protein; KEGG: pol:Bpro_2929 2-dehydropantoate 2-reductase
YP_969766.1	KEGG: hch:HCH_04431 hypothetical protein
YP_969770.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rfr:Rfer_2225 methyl-accepting chemotaxis sensory transducer
YP_969771.1	TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor RpoD domain protein; PFAM: sigma-70 1.1 domain protein; sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70, non-essential domain protein; sigma-70 region 1.2; KEGG: pol:Bpro_3097 sigma 70 (RpoD)
YP_969772.1	KEGG: rfr:Rfer_2203 DNA primase; TIGRFAM: DNA primase; PFAM: zinc finger, CHC2-family protein; TOPRIM domain protein; DNA primase catalytic core, N-terminal domain; SMART: Toprim sub domain protein
YP_969773.1	PFAM: EAL domain protein; KEGG: xcb:XC_3163 EAL domain protein
YP_969774.1	PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: csa:Csal_2479 TRAP dicarboxylate transporter, DctP subunit
YP_969775.1	PFAM: gamma-glutamyltranspeptidase; KEGG: pol:Bpro_3094 gamma-glutamyltransferase
YP_969776.1	PFAM: Alkaline phosphatase; KEGG: rfr:Rfer_1326 alkaline phosphatase
YP_969777.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rfr:Rfer_0005 diguanylate cyclase
YP_969778.1	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rfr:Rfer_2783 alcohol dehydrogenase, zinc-binding
YP_969779.1	catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate
YP_969780.1	KEGG: rfr:Rfer_2781 protein-L-isoaspartate O-methyltransferase; TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase
YP_969781.1	PFAM: Peptidoglycan-binding LysM; peptidase M23B; KEGG: pol:Bpro_3059 peptidase M23B
YP_969782.1	TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: pol:Bpro_2615 pseudouridine synthase, RluD
YP_969783.1	TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: pol:Bpro_2614 putative transcriptional regulator
YP_969784.1	PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: rfr:Rfer_2312 pseudouridine synthase, Rsu
YP_969785.1	catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate
YP_969786.1	TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; KEGG: rfr:Rfer_2310 hypothetical protein
YP_969787.1	KEGG: pol:Bpro_2610 tetratricopeptide TPR_2; TIGRFAM: type IV pilus biogenesis/stability protein PilW; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein
YP_969788.1	KEGG: pol:Bpro_2609 hypothetical protein
YP_969789.1	catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis
YP_969790.1	catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG
YP_969791.1	KEGG: pol:Bpro_2606 hypothetical protein
YP_969792.1	SMART: Pyrrolo-quinoline quinone; KEGG: pol:Bpro_2605 pyrrolo-quinoline quinone
YP_969793.1	EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains
YP_969794.1	TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein, core; KEGG: rfr:Rfer_2302 host factor Hfq
YP_969795.1	HSR1-related protein; PFAM: GTP-binding protein, HSR1-related; KEGG: rfr:Rfer_2301 small GTP-binding protein domain
YP_969796.1	TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: rfr:Rfer_2300 HflK protein
YP_969797.1	TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: rfr:Rfer_2299 HflC protein
YP_969798.1	PFAM: tRNA synthetase, class II (G, H, P and S); KEGG: rfr:Rfer_2297 tRNA synthetase, class II (G, H, P and S)
YP_969799.1	catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis
YP_969800.1	PFAM: phosphoribosyltransferase; KEGG: rfr:Rfer_2295 phosphoribosyltransferase
YP_969801.1	PFAM: pseudouridine synthase; KEGG: pol:Bpro_1800 pseudouridine synthase, Rsu
YP_969802.1	KEGG: pol:Bpro_1802 hypothetical protein
YP_969803.1	PFAM: polysaccharide deacetylase; KEGG: pol:Bpro_1803 polysaccharide deacetylase
YP_969804.1	KEGG: pol:Bpro_1804 hypothetical protein
YP_969805.1	KEGG: rfr:Rfer_2977 putative transmembrane protein
YP_969806.1	PFAM: molybdopterin binding domain; KEGG: pol:Bpro_1806 molybdopterin binding domain
YP_969807.1	KEGG: pol:Bpro_1807 glutamine synthetase, type I; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp
YP_969808.1	KEGG: rfr:Rfer_2980 conserved hypothetical signal peptide protein
YP_969809.1	PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; KEGG: pol:Bpro_1809 signal transduction histidine kinase, nitrogen specific, NtrB
YP_969810.1	KEGG: pol:Bpro_1810 nitrogen metabolism transcriptional regulator, NtrC, fis family; TIGRFAM: nitrogen regulation protein NR(I); PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase
YP_969811.1	KEGG: bxe:Bxe_B1169 hypothetical protein
YP_969812.1	TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: pol:Bpro_1820 exodeoxyribonuclease III (xth)
YP_969813.1	PFAM: dihydrofolate reductase region; KEGG: rfr:Rfer_2985 dihydrofolate reductase
YP_969814.1	KEGG: pol:Bpro_1821 putative transmembrane protein
YP_969815.1	ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived
YP_969816.1	KEGG: pst:PSPTO_4366 iron-regulated protein A, putative
YP_969817.1	PFAM: FAD linked oxidase domain protein; KEGG: pol:Bpro_1828 FAD linked oxidase-like
YP_969818.1	KEGG: pol:Bpro_1829 membrane protein-like
YP_969819.1	TIGRFAM: putative ribonuclease BN; PFAM: ribonuclease BN; KEGG: pol:Bpro_1830 ribonuclease BN, putative
YP_969820.1	PFAM: amine oxidase; KEGG: rfr:Rfer_1548 amine oxidase
YP_969821.1	PFAM: Squalene/phytoene synthase; KEGG: pol:Bpro_2017 squalene/phytoene synthase
YP_969822.1	KEGG: rfr:Rfer_1556 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16, lon domain protein; AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase
YP_969823.1	binds and unfolds substrates as part of the ClpXP protease
YP_969824.1	hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates
YP_969825.1	Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer
YP_969826.1	PFAM: acriflavin resistance protein; KEGG: pol:Bpro_2028 acriflavin resistance protein
YP_969827.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: pol:Bpro_2027 secretion protein HlyD
YP_969828.1	PFAM: Squalene/phytoene synthase; KEGG: rfr:Rfer_1550 squalene/phytoene synthase
YP_969830.1	PFAM: protein of unknown function DUF796; KEGG: bpa:BPP0716 hypothetical protein
YP_969831.1	PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: bur:Bcep18194_B1590 serine/threonine protein kinase
YP_969832.1	PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: dar:Daro_0439 hypothetical protein
YP_969833.1	PFAM: Forkhead-associated protein; KEGG: pfl:PFL_6085 FHA domain protein, putative
YP_969834.1	PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: dar:Daro_3311 protein phosphatase 2C-like
YP_969835.1	KEGG: bte:BTH_II0251 lipoprotein, putative
YP_969836.1	PFAM: protein of unknown function DUF876; KEGG: bur:Bcep18194_B1594 protein of unknown function DUF876
YP_969837.1	PFAM: OmpA/MotB domain protein; KEGG: bbr:BB0815 hypothetical protein
YP_969838.1	PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: bbr:BB0816 hypothetical protein
YP_969839.1	KEGG: bbr:BB0817 hypothetical protein
YP_969840.1	PFAM: ImpA domain protein; KEGG: bps:BPSS2101 hypothetical protein
YP_969841.1	PFAM: uncharacterized conserved protein UCP028301; KEGG: bte:BTH_II0121 protein of unknown function (DUF770) superfamily
YP_969842.1	PFAM: protein of unknown function DUF877; KEGG: bbr:BB0801 hypothetical protein
YP_969843.1	PFAM: virulence protein, SciE type; KEGG: xac:XAC4144 hypothetical protein
YP_969844.1	PFAM: protein of unknown function DUF1316; KEGG: bbr:BB0804 hypothetical protein
YP_969845.1	PFAM: protein of unknown function DUF879; KEGG: bpa:BPP0719 hypothetical protein
YP_969846.1	PFAM: protein of unknown function DUF1305; KEGG: bur:Bcep18194_B1583 protein of unknown function DUF1305
YP_969847.1	PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: xac:XAC4140 ClpB
YP_969848.1	KEGG: rfr:Rfer_3359 hypothetical protein
YP_969849.1	PFAM: protein of unknown function DUF45; KEGG: pol:Bpro_3622 protein of unknown function DUF45
YP_969850.1	PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: rpc:RPC_1131 xanthine dehydrogenase
YP_969851.1	PFAM: molybdopterin dehydrogenase, FAD-binding; KEGG: xac:XAC2894 oxidoreductase
YP_969852.1	KEGG: pol:Bpro_2045 glutamate racemase; TIGRFAM: glutamate racemase; PFAM: Asp/Glu racemase
YP_969853.1	TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha subunit; hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyases tartrate/fumarate alpha region; Fe-S type hydro-lyases tartrate/fumarate beta region; KEGG: pol:Bpro_2046 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
YP_969854.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; MHYT domain protein; KEGG: pfo:Pfl_2525 putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains)
YP_969855.1	class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle
YP_969856.1	KEGG: bxe:Bxe_B1162 putative DNA topoisomerase, type I
YP_969857.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sfv:SFV_2140 transcriptional response regulatory protein
YP_969858.1	PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; KEGG: rso:RS05645 probable two-component sensor histidine kinase transcription regulator protein
YP_969859.1	with ProVW, part of the high-affinity transport system for the osmoprotectant glycine betaine
YP_969860.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hch:HCH_01362 ABC-type proline/glycine betaine transport system, permease component
YP_969861.1	KEGG: hch:HCH_01361 ABC-type proline/glycine betaine transport system, ATPase component; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: CBS domain containing protein; ABC transporter-related protein; SMART: AAA ATPase
YP_969862.1	PFAM: uncharacterized protein UPF0114; KEGG: pol:Bpro_2048 uncharacterized protein UPF0114
YP_969863.1	TIGRFAM: acetate--CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: rfr:Rfer_2581 acetate--CoA ligase
YP_969864.1	KEGG: rfr:Rfer_3310 hypothetical protein
YP_969865.1	KEGG: bpm:BURPS1710b_0292 putative lipoprotein
YP_969866.1	KEGG: bps:BPSL0067 hypothetical protein
YP_969867.1	PFAM: cytochrome c, class I; KEGG: pol:Bpro_2050 cytochrome c, class I
YP_969868.1	KEGG: rfr:Rfer_2469 hypothetical protein
YP_969869.1	catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis
YP_969870.1	TIGRFAM: bacterioferritin; PFAM: Ferritin, Dps family protein; KEGG: pae:PA4235 bacterioferritin
YP_969871.1	PFAM: leucine-rich repeat protein; filamentation induced by cAMP protein Fic; KEGG: xcb:XC_1553 leucin rich protein
YP_969872.1	transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein
YP_969873.1	PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: pol:Bpro_2090 transcriptional regulator, GntR family
YP_969874.1	PFAM: Malonyl-CoA decarboxylase; KEGG: pol:Bpro_2091 malonyl-CoA decarboxylase
YP_969875.1	PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: bcn:Bcen_2208 transposase IS116/IS110/IS902
YP_969876.1	PFAM: uncharacterized protein UPF0065; KEGG: pol:Bpro_2092 twin-arginine translocation pathway signal
YP_969877.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rfr:Rfer_1924 enoyl-CoA hydratase/isomerase
YP_969878.1	catalyzes the formation of malonyl-CoA from malonate and CoA
YP_969879.1	PFAM: filamentation induced by cAMP protein Fic
YP_969880.1	PFAM: Integrase, catalytic region; KEGG: eba:ebA5932 transposase
YP_969881.1	KEGG: eba:ebA5933 transposition helper protein
YP_969882.1	PFAM: UspA domain protein; KEGG: rfr:Rfer_1926 UspA
YP_969884.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: rfr:Rfer_1927 heavy metal translocating P-type ATPase
YP_969885.1	TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type; KEGG: rfr:Rfer_1929 cytochrome oxidase maturation protein, cbb3-type
YP_969886.1	CcoN; FixN
YP_969887.1	CcoO; FixO
YP_969888.1	PFAM: Cbb3-type cytochrome oxidase component; KEGG: pol:Bpro_4303 Cbb3-type cytochrome oxidase component
YP_969889.1	TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; PFAM: cytochrome c, class I; KEGG: pol:Bpro_4302 cytochrome c oxidase, cbb3-type, subunit III
YP_969890.1	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: pol:Bpro_4301 4Fe-4S ferredoxin, iron-sulfur binding
YP_969891.1	KEGG: pol:Bpro_4300 hypothetical protein
YP_969892.1	KEGG: rfr:Rfer_1936 hypothetical protein
YP_969893.1	PFAM: cyclic nucleotide-binding; regulatory protein, Crp; KEGG: rfr:Rfer_1937 transcriptional regulator, Crp/Fnr family
YP_969894.1	catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III
YP_969895.1	KEGG: pol:Bpro_1209 hypothetical protein
YP_969896.1	TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; KEGG: rfr:Rfer_2630 metal dependent phosphohydrolase
YP_969897.1	KEGG: rfr:Rfer_2629 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; SMART: PAS domain containing protein
YP_969898.1	PFAM: protein of unknown function DUF710; KEGG: pol:Bpro_2788 protein of unknown function DUF710
YP_969899.1	KEGG: pol:Bpro_2787 hypothetical protein
YP_969900.1	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: cvi:CV0494 probable outer membrane receptor protein
YP_969901.1	PFAM: Cobyrinic acid a,c-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: pol:Bpro_2785 cobyrinic acid a,c-diamide synthase
YP_969902.1	PFAM: cobalbumin biosynthesis enzyme; KEGG: pol:Bpro_2783 cobalbumin biosynthesis enzyme
YP_969903.1	PFAM: periplasmic binding protein; KEGG: pol:Bpro_2782 periplasmic binding protein
YP_969904.1	PFAM: transport system permease protein; KEGG: pol:Bpro_2781 transport system permease protein
YP_969905.1	PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_2780 ABC transporter-related protein
YP_969906.1	KEGG: pol:Bpro_2764 cob(I)alamin adenosyltransferase; TIGRFAM: cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
YP_969907.1	TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase; KEGG: rfr:Rfer_2617 Cob(II)yrinic acid a,c-diamide reductase
YP_969908.1	TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB; KEGG: rfr:Rfer_2616 cobalamin biosynthesis protein CobD
YP_969909.1	PFAM: aminotransferase, class I and II; KEGG: rfr:Rfer_2615 aminotransferase, class I and II
YP_969911.1	KEGG: ecs:ECs3487 hypothetical protein
YP_969912.1	KEGG: gvi:gll2767 hypothetical protein
YP_969913.1	KEGG: ade:Adeh_2155 hypothetical protein
YP_969914.1	PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: pst:PSPTO_1056 oxidoreductase, short chain dehydrogenase/reductase family
YP_969915.1	TIGRFAM: cobyric acid synthase CobQ; PFAM: Cobyrinic acid a,c-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: pol:Bpro_2760 cobyric acid synthase CobQ
YP_969916.1	PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; KEGG: rfr:Rfer_2611 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase
YP_969919.1	PFAM: Asp/Glu racemase; KEGG: pol:Bpro_1006 Asp/Glu racemase
YP_969920.1	PFAM: transposase, IS4 family protein; KEGG: rso:RSc1704 ISRSO18-transposase protein
YP_969922.1	TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: rme:Rmet_5906 metabolite
YP_969923.1	KEGG: eba:ebA7139 hypothetical protein, INTERPRO suggestion: probable sugar transporter superfamily
YP_969924.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bbr:BB2408 putative acetyltransferase
YP_969925.1	KEGG: pol:Bpro_2747 endonuclease III; TIGRFAM: endonuclease III; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; SMART: iron-sulfur cluster loop
YP_969926.1	PFAM: aminotransferase, class I and II; KEGG: pol:Bpro_2746 aminotransferase, class I and II
YP_969927.1	PFAM: SlyX family protein; KEGG: bbr:BB1266 SlyX protein
YP_969928.1	PFAM: aldo/keto reductase; KEGG: rfr:Rfer_3469 aldo/keto reductase
YP_969929.1	KEGG: rfr:Rfer_0522 hypothetical protein
YP_969930.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: rfr:Rfer_3579 DEAD/DEAH box helicase-like
YP_969931.1	involved in start site selection during the initiation of translation
YP_969932.1	KEGG: dar:Daro_1138 hypothetical protein
YP_969933.1	KEGG: bur:Bcep18194_A5150 globin-like protein
YP_969934.1	PFAM: protein of unknown function DUF542, ScdA domain protein; Hemerythrin HHE cation binding domain protein; KEGG: rso:RS02289 hypothetical protein
YP_969935.1	TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: rfr:Rfer_1883 transcriptional regulator, BadM/Rrf2 family
YP_969936.1	specific inhibitor of chromosomal initiation of replication in vitro; inds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport
YP_969937.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: rme:Rmet_3862 lysine exporter protein (LysE/YggA)
YP_969938.1	TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: bbr:BB4519 putative exported protein
YP_969939.1	KEGG: pol:Bpro_2720 phosphoserine phosphatase SerB; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase, subfamily IB hypothetical 1; Haloacid dehalogenase domain protein hydrolase, type 3
YP_969940.1	PFAM: regulatory protein, LuxR; KEGG: bur:Bcep18194_A5229 transcriptional regulator, LuxR family
YP_969941.1	PFAM: Tannase and feruloyl esterase; KEGG: reu:Reut_A1509 tannase and feruloyl esterase
YP_969942.1	KEGG: rme:Rmet_1193 hypothetical protein
YP_969943.1	KEGG: rfr:Rfer_1331 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like
YP_969944.1	TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: pol:Bpro_2716 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
YP_969945.1	KEGG: pol:Bpro_2715 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: MECDP-synthase
YP_969946.1	PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; KEGG: pol:Bpro_2714 periplasmic sensor signal transduction histidine kinase
YP_969947.1	part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of ompF; also functions in regulation of other genes; forms dimers upon phosphorylation
YP_969948.1	PFAM: protein of unknown function DUF541; KEGG: pol:Bpro_2712 protein of unknown function DUF541
YP_969949.1	catalyzes the formation of acetoacetate from 3-hydroxybutyrate
YP_969950.1	PFAM: alpha/beta hydrolase fold; KEGG: rfr:Rfer_2070 alpha/beta hydrolase
YP_969951.1	KEGG: rfr:Rfer_2071 (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; RelA/SpoT domain protein
YP_969953.1	KEGG: ade:Adeh_3063 VCBS
YP_969954.1	PFAM: OsmC family protein; KEGG: rfr:Rfer_3388 OsmC-like protein
YP_969956.1	TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: bxe:Bxe_B1164 peptidase C56, PfpI
YP_969957.1	KEGG: pol:Bpro_1344 hypothetical protein
YP_969958.1	TIGRFAM: polyhydroxyalkanoate synthesis repressor PhaR; PFAM: PHB accumulation regulatory domain protein; PHA accumulation regulator DNA-binding protein; KEGG: pol:Bpro_2702 polyhydroxyalkanoate synthesis repressor PhaR
YP_969959.1	KEGG: pst:PSPTO_4011 hypothetical protein
YP_969961.1	KEGG: cgb:cg1965 similarity to hypothetical protein GP57-phage N15
YP_969962.1	TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: bxe:Bxe_A3097 ParB-like partition protein
YP_969968.1	PFAM: peptidase S24, S26A and S26B; SMART: helix-turn-helix domain protein; KEGG: sfv:SFV_0270 putative prophage repressor CI
YP_969971.1	KEGG: bte:BTH_II1027 GP65
YP_969973.1	PFAM: virulence-associated E family protein; KEGG: ppu:PP_3038 pyocin R2_PP, TraC domain protein
YP_969975.1	KEGG: net:Neut_1474 HNH endonuclease
YP_969976.1	TIGRFAM: phage terminase, small subunit, putative, P27 family; KEGG: nfa:nfa380 hypothetical protein
YP_969977.1	PFAM: phage Terminase; KEGG: ppu:PP_3881 phage terminase, large subunit, putative
YP_969978.1	TIGRFAM: phage portal protein, HK97 family; PFAM: phage portal protein; KEGG: ppu:PP_3879 phage portal protein, HK97 family
YP_969979.1	PFAM: peptidase S49; KEGG: ppu:PP_3878 phage minor capsid protein C, putative
YP_969980.1	TIGRFAM: phage major capsid protein, HK97 family; PFAM: phage major capsid protein, HK97; KEGG: ppu:PP_3877 hypothetical protein
YP_969982.1	KEGG: ppu:PP_3875 hypothetical protein
YP_969983.1	PFAM: phage head-tail adaptor, putative; KEGG: rso:RSc1686 probable phage HK022 GP9-related protein
YP_969984.1	TIGRFAM: phage protein, HK97 gp10 family; KEGG: rso:RSc1687 hypothetical protein
YP_969985.1	KEGG: rso:RSc1688 hypothetical protein
YP_969986.1	KEGG: rso:RSc1689 hypothetical protein
YP_969989.1	PFAM: Prophage tail length tape measure; KEGG: rso:RSc1690 probable phage HK97 tail length TAPE measure-related protein
YP_969990.1	PFAM: Carbohydrate-binding family V/XII; KEGG: rsp:RSP_3763 hypothetical protein
YP_969991.1	KEGG: eci:UTI89_C1519 putative tail fiber protein
YP_969992.1	KEGG: rno:678915 hypothetical protein LOC678915
YP_969993.1	KEGG: nmu:Nmul_A1447 hypothetical protein
YP_969994.1	KEGG: mag:amb0396 hypothetical protein
YP_969995.1	KEGG: psp:PSPPH_0656 hypothetical protein
YP_969998.1	KEGG: pae:PA0631 hypothetical protein
YP_969999.1	PFAM: D12 class N6 adenine-specific DNA methyltransferase; KEGG: bte:BTH_II1068 DNA adenine methylase
YP_970005.1	PFAM: Recombinase; KEGG: ppu:PP_3026 phage recombinase, putative
YP_970006.1	catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit
YP_970007.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bcn:Bcen_6430 metabolite
YP_970008.1	KEGG: xac:XAC3230 hypothetical protein
YP_970009.1	Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA
YP_970010.1	KEGG: pol:Bpro_3073 hypothetical protein
YP_970011.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bxe:Bxe_B0452 transcriptional regulator, LysR family
YP_970012.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bxe:Bxe_A2730 predicted acyl-CoA transferase/carnitine dehydratase, CaiB/BaiF family
YP_970013.1	PFAM: pyruvate carboxyltransferase; KEGG: bxe:Bxe_A2729 putative hydroxymethylglutaryl-CoA lyase
YP_970014.1	PFAM: uncharacterized protein UPF0065; KEGG: pol:Bpro_0585 uncharacterized protein UPF0065
YP_970015.1	PFAM: uncharacterized protein UPF0065; KEGG: bbr:BB0514 hypothetical protein
YP_970016.1	PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: rfr:Rfer_3100 transcriptional regulator, RpiR family
YP_970017.1	PFAM: peptidase T2, asparaginase 2; KEGG: pol:Bpro_0141 peptidase T2, asparaginase 2
YP_970018.1	KEGG: pol:Bpro_0140 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter-related protein; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase
YP_970019.1	PFAM: extracellular solute-binding protein, family 5; KEGG: pol:Bpro_0139 extracellular solute-binding protein, family 5
YP_970020.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_0138 binding-protein-dependent transport systems inner membrane component
YP_970021.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_0137 binding-protein-dependent transport systems inner membrane component
YP_970022.1	PFAM: peptidase S58, DmpA; KEGG: pol:Bpro_0136 peptidase S58, DmpA
YP_970023.1	PFAM: peptidase M55, D-aminopeptidase; KEGG: rfr:Rfer_3107 peptidase M55, D-aminopeptidase
YP_970024.1	TIGRFAM: aspartate racemase; PFAM: Asp/Glu racemase; KEGG: rfr:Rfer_3108 aspartate racemase
YP_970025.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
YP_970026.1	KEGG: pol:Bpro_3070 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase
YP_970027.1	PFAM: histone family protein DNA-binding protein; KEGG: rfr:Rfer_2248 histone-like DNA-binding protein
YP_970028.1	PFAM: phage integrase family protein; KEGG: bja:bll0870 probable site-specific integrase/recombinase
YP_970031.1	KEGG: ecj:JW2358 conserved hypothetical protein
YP_970033.1	PFAM: phage Gp37Gp68 family protein; KEGG: bpm:BURPS1710b_1658 GP38
YP_970041.1	PFAM: C-5 cytosine-specific DNA methylase; KEGG: sit:TM1040_1691 C-5 cytosine-specific DNA methylase
YP_970042.1	KEGG: eba:ebA11 hypothetical protein
YP_970043.1	KEGG: nme:NMB0907 hypothetical protein
YP_970045.1	PFAM: DNA methylase N-4/N-6 domain protein; KEGG: mes:Meso_1199 helicase-like
YP_970047.1	PFAM: peptidase S24, S26A and S26B; SMART: helix-turn-helix domain protein; KEGG: ppu:PP_3896 transcriptional regulator, Cro/CI family
YP_970051.1	KEGG: ypn:YPN_1572 phage regulatory protein
YP_970052.1	KEGG: bbr:BB1683 phage-related hypothetical protein
YP_970053.1	KEGG: psb:Psyr_2809 hypothetical protein
YP_970055.1	KEGG: son:SO2982 hypothetical protein
YP_970058.1	KEGG: ngo:NGO1101 hypothetical protein, putative phage associated protein
YP_970059.1	PFAM: Terminase small subunit; KEGG: sit:TM1040_0800 terminase small subunit
YP_970060.1	KEGG: ret:RHE_CH01093 putative terminase large subunit protein
YP_970061.1	KEGG: ngo:NGO1097 hypothetical protein, putative phage associated protein
YP_970062.1	KEGG: mes:Meso_4410 competence protein-like
YP_970063.1	KEGG: ngo:NGO1091 hypothetical protein, putative phage associated protein
YP_970064.1	KEGG: ngo:NGO1090 hypothetical protein, putative phage associated protein
YP_970065.1	KEGG: ngo:NGO1089 hypothetical protein, putative phage associated protein
YP_970066.1	KEGG: ngo:NGO1088 hypothetical protein, putative phage associated protein
YP_970067.1	KEGG: dps:DP2000 hypothetical protein
YP_970070.1	KEGG: dps:DP1996 hypothetical protein
YP_970073.1	KEGG: dps:DP1998 hypothetical protein
YP_970074.1	KEGG: dps:DP1998 hypothetical protein
YP_970076.1	KEGG: mxa:MXAN_1429 response regulator receiver domain/DnaJ domain protein
YP_970077.1	KEGG: fal:FRAAL6089 putative serine protease (partial match)
YP_970078.1	PFAM: Arc domain protein DNA binding domain protein; KEGG: aci:ACIAD2172 hypothetical protein; putative phage regulatory protein
YP_970079.1	KEGG: eci:UTI89_C2637 antirepressor protein
YP_970080.1	KEGG: pol:Bpro_2980 hypothetical protein
YP_970082.1	KEGG: ngo:NGO1092 hypothetical protein, putative phage associated protein
YP_970086.1	KEGG: nha:Nham_1427 hypothetical protein
YP_970087.1	KEGG: stm:STM4199 putative cytoplasmic protein
YP_970088.1	KEGG: nma:NMA1822 hypothetical protein
YP_970090.1	KEGG: yps:YPTB1805 probable endolysin (lysis protein) (lysozyme)
YP_970092.1	KEGG: pae:PA0631 hypothetical protein
YP_970093.1	KEGG: sty:HCM2.0024c hypothetical protein
YP_970094.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: rfr:Rfer_2249 PpiC-type peptidyl-prolyl cis-trans isomerase
YP_970095.1	PFAM: phage integrase family protein; KEGG: eba:ebA5849 phage-related integrase
YP_970098.1	KEGG: ade:Adeh_2705 response regulator receiver
YP_970099.1	KEGG: psb:Psyr_2830 hypothetical protein
YP_970101.1	PFAM: C-5 cytosine-specific DNA methylase; KEGG: hch:HCH_02855 site-specific DNA methylase
YP_970104.1	KEGG: eba:ebA11 hypothetical protein
YP_970105.1	KEGG: nme:NMB0907 hypothetical protein
YP_970107.1	PFAM: DNA methylase N-4/N-6 domain protein; KEGG: mes:Meso_1199 helicase-like
YP_970111.1	PFAM: helix-turn-helix domain protein; peptidase S24, S26A and S26B; KEGG: psb:Psyr_2812 helix-turn-helix motif:peptidase S24, S26A and S26B
YP_970112.1	KEGG: eba:ebB253 hypothetical protein
YP_970117.1	KEGG: dvu:DVU0230 transcriptional regulator CII, putative
YP_970119.1	KEGG: xft:PD1347 hypothetical protein
YP_970128.1	KEGG: bps:BPSL1144 hypothetical protein
YP_970129.1	PFAM: phage Terminase; KEGG: bps:BPSL1143 putative phage terminase
YP_970131.1	TIGRFAM: phage portal protein, HK97 family; PFAM: phage portal protein; KEGG: eba:ebA5484 putative phage portal protein
YP_970132.1	KEGG: ecs:ECs1975 hypothetical protein
YP_970134.1	PFAM: phage head-tail adaptor, putative; KEGG: rso:RSc1686 probable phage HK022 GP9-related protein
YP_970135.1	KEGG: rso:RSc1687 hypothetical protein
YP_970136.1	KEGG: rso:RSc1688 hypothetical protein
YP_970137.1	KEGG: bbr:BB3494 hypothetical protein
YP_970138.1	KEGG: ppr:PBPRB1280 hypothetical protein
YP_970139.1	KEGG: ppr:PBPRB1279 hypothetical protein
YP_970140.1	KEGG: bpe:BP3367 hypothetical protein
YP_970141.1	PFAM: Prophage tail length tape measure; KEGG: rso:RSc1690 probable phage HK97 tail length TAPE measure-related protein
YP_970142.1	PFAM: Carbohydrate-binding family V/XII; KEGG: rsp:RSP_3763 hypothetical protein
YP_970143.1	KEGG: stm:STM1049 probable tail fiber protein
YP_970144.1	KEGG: rno:678915 hypothetical protein LOC678915
YP_970145.1	KEGG: nmu:Nmul_A1447 hypothetical protein
YP_970146.1	KEGG: ppu:PP_1583 structural protein P5, putative
YP_970147.1	KEGG: psp:PSPPH_0656 hypothetical protein
YP_970150.1	KEGG: pae:PA0631 hypothetical protein
YP_970155.1	PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: pol:Bpro_2149 sodium/hydrogen exchanger
YP_970156.1	PFAM: peptidase M14, carboxypeptidase A; KEGG: pol:Bpro_2152 peptidase M14, carboxypeptidase A
YP_970157.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: rfr:Rfer_2169 DEAD/DEAH box helicase-like
YP_970158.1	PFAM: transposase, IS4 family protein; KEGG: bxe:Bxe_C0489 putative transposase IS4
YP_970159.1	TIGRFAM: ATP synthase F1, epsilon subunit; PFAM: H+-transporting two-sector ATPase, delta/epsilon subunit; KEGG: reu:Reut_A3345 H+-transporting two-sector ATPase, delta/epsilon subunit
YP_970160.1	ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence
YP_970161.1	KEGG: rfr:Rfer_2170 hypothetical protein
YP_970162.1	KEGG: pol:Bpro_3507 TRAP transporter solute receptor, TAXI family
YP_970163.1	PFAM: peptidase S58, DmpA; KEGG: bmb:BruAb2_0832 hypothetical protein
YP_970164.1	KEGG: bce:BC0912 thioredoxin
YP_970165.1	PFAM: beta-lactamase domain protein; KEGG: hch:HCH_01185 Zn-dependent hydrolase, including glyoxylases
YP_970166.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bbr:BB3251 probable LysR-family transcriptional regulator
YP_970168.1	PFAM: protein of unknown function DUF411; KEGG: pol:Bpro_3488 protein of unknown function DUF411
YP_970169.1	PFAM: multicopper oxidase, type 2; multicopper oxidase, type 3; KEGG: pol:Bpro_3485 twin-arginine translocation pathway signal
YP_970171.1	KEGG: pol:Bpro_3482 hypothetical protein
YP_970172.1	PFAM: protein of unknown function DUF161; KEGG: eca:ECA3669 hypothetical protein
YP_970173.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: dar:Daro_2631 ATPase, E1-E2 type:heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase:heavy metal translocating P-type ATPase
YP_970174.1	PFAM: regulatory protein, MerR; KEGG: pol:Bpro_3479 transcriptional regulator, MerR family
YP_970175.1	KEGG: pol:Bpro_2659 ABC-type transport system ipermease component
YP_970176.1	PFAM: Mammalian cell entry related domain protein; KEGG: pol:Bpro_2658 ABC-type transport system periplasmic component
YP_970177.1	KEGG: pol:Bpro_2657 hypothetical protein
YP_970179.1	TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family N-terminal domain protein; KEGG: rfr:Rfer_1984 protein of unknown function UPF0031
YP_970180.1	PFAM: FAD dependent oxidoreductase; KEGG: pol:Bpro_2697 D-amino-acid dehydrogenase
YP_970181.1	one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit
YP_970182.1	EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu
YP_970183.1	Catalyzes the phosphorylation of UMP to UDP
YP_970184.1	Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs
YP_970185.1	KEGG: pol:Bpro_2691 undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase
YP_970186.1	PFAM: phosphatidate cytidylyltransferase; KEGG: pol:Bpro_2690 phosphatidate cytidylyltransferase
YP_970187.1	catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate
YP_970188.1	TIGRFAM: putative membrane-associated zinc metalloprotease; PFAM: peptidase M50; KEGG: pol:Bpro_2688 peptidase M50, putative membrane-associated zinc metallopeptidase
YP_970189.1	PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: pol:Bpro_2687 surface antigen (D15)
YP_970190.1	PFAM: outer membrane chaperone Skp (OmpH); KEGG: pol:Bpro_2686 outer membrane chaperone Skp (OmpH)
YP_970191.1	adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis
YP_970192.1	in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP
YP_970193.1	TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; KEGG: pol:Bpro_2683 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase
YP_970194.1	catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM
YP_970195.1	RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids
YP_970196.1	PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: pol:Bpro_2680 tRNA/rRNA methyltransferase (SpoU)
YP_970197.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rme:Rmet_5895 L-carnitine dehydratase/bile acid-inducible protein F
YP_970198.1	PFAM: uncharacterized protein UPF0065; KEGG: reu:Reut_B5438 hypothetical protein
YP_970199.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rme:Rmet_5893 acyl-CoA dehydrogenase-like protein
YP_970200.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rme:Rmet_5892 transcriptional regulator, LysR family
YP_970201.1	catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate
YP_970202.1	TIGRFAM: aminopeptidase N; PFAM: peptidase M1, membrane alanine aminopeptidase; KEGG: pol:Bpro_1587 peptidase M1, alanyl aminopeptidase
YP_970203.1	KEGG: rba:RB459 hypothetical protein
YP_970204.1	KEGG: bpe:BP3115 hypothetical protein
YP_970205.1	TIGRFAM: peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: tbd:Tbd_0921 peptide chain release factor 2
YP_970206.1	PFAM: Formamidopyrimidine-DNA glycolase; KEGG: xac:XAC0606 endonuclease
YP_970207.1	PFAM: aldo/keto reductase; KEGG: pol:Bpro_1592 aldo/keto reductase
YP_970208.1	TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: pol:Bpro_1593 hypothetical protein
YP_970209.1	PFAM: protein of unknown function DUF205; KEGG: pol:Bpro_1594 protein of unknown function DUF205
YP_970210.1	KEGG: rfr:Rfer_2693 HD-GYP domain-like
YP_970211.1	KEGG: pol:Bpro_1595 hypothetical protein
YP_970212.1	putative nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription
YP_970213.1	KEGG: pol:Bpro_1597 UDP-N-acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: FAD linked oxidase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase domain protein
YP_970214.1	catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis
YP_970215.1	PFAM: protein of unknown function DUF1255; KEGG: pol:Bpro_1600 protein of unknown function DUF1255
YP_970216.1	PFAM: 17 kDa surface antigen; KEGG: pol:Bpro_1601 17 kDa surface antigen
YP_970217.1	PFAM: arsenate reductase and related; KEGG: pol:Bpro_1602 hypothetical protein
YP_970218.1	TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetases domain protein; Mur ligase, middle domain protein; KEGG: rfr:Rfer_2686 FolC bifunctional protein
YP_970219.1	PFAM: Sporulation domain protein; KEGG: pol:Bpro_1605 sporulation related
YP_970220.1	PFAM: Colicin V production protein; KEGG: pol:Bpro_1606 colicin V production protein
YP_970221.1	Catalyzes first step of the de novo purine nucleotide biosynthetic pathway
YP_970222.1	KEGG: pol:Bpro_1608 O-succinylhomoserine sulfhydrylase; TIGRFAM: O-succinylhomoserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzyme; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase
YP_970223.1	Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation
YP_970224.1	KEGG: pae:PA4838 hypothetical protein
YP_970225.1	TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: mlo:mll1470 probable membrane transport protein
YP_970226.1	PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A3373 major facilitator superfamily (MFS) multidrug efflux pump
YP_970227.1	PFAM: protein of unknown function DUF72; KEGG: bpm:BURPS1710b_1059 hypothetical protein
YP_970228.1	PFAM: Integrase, catalytic region; KEGG: bpa:BPP2353 IS1002 transposase
YP_970229.1	PFAM: protein of unknown function DUF1304; KEGG: cvi:CV1434 hypothetical protein
YP_970230.1	KEGG: dar:Daro_1297 hypothetical protein
YP_970231.1	PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; KEGG: bps:BPSL2602 putative ATPase protein
YP_970232.1	PFAM: histidine kinase, HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: bcn:Bcen_3992 methyl-accepting chemotaxis sensory transducer
YP_970233.1	PFAM: inner-membrane translocator; KEGG: rfr:Rfer_3172 inner-membrane translocator
YP_970234.1	PFAM: inner-membrane translocator; KEGG: rfr:Rfer_3171 inner-membrane translocator
YP_970235.1	PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_3794 ABC transporter-related protein
YP_970236.1	PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_3793 ABC transporter-related protein
YP_970237.1	PFAM: OmpA domain protein transmembrane region-containing protein; KEGG: pol:Bpro_2709 OmpA-like transmembrane region
YP_970238.1	PFAM: protein of unknown function DUF47; KEGG: rfr:Rfer_1398 protein of unknown function DUF47
YP_970239.1	PFAM: phosphate transporter; KEGG: pol:Bpro_1687 phosphate transporter
YP_970240.1	KEGG: rfr:Rfer_1400 hypothetical protein
YP_970241.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pol:Bpro_1689 GCN5-related N-acetyltransferase
YP_970242.1	binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity
YP_970243.1	Essential for efficient processing of 16S rRNA
YP_970244.1	methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA
YP_970245.1	this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
YP_970246.1	PFAM: NUDIX hydrolase; KEGG: rfr:Rfer_1406 NUDIX hydrolase
YP_970247.1	KEGG: pol:Bpro_1695 hypothetical protein
YP_970248.1	TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC; KEGG: rfr:Rfer_1409 GTPase EngC
YP_970249.1	PFAM: transcriptional coactivator/pterin dehydratase; KEGG: rfr:Rfer_1410 transcriptional coactivator/pterin dehydratase
YP_970250.1	PFAM: peptidase M48, Ste24p; KEGG: rfr:Rfer_1411 STE24 endopeptidase
YP_970251.1	3'-5' exoribonuclease specific for small oligoribonuclotides
YP_970252.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: rfr:Rfer_1413 DEAD/DEAH box helicase-like
YP_970253.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bxe:Bxe_B1745 putative diguanylate cyclase (GGDEF domain)
YP_970254.1	TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: pol:Bpro_0389 drug resistance transporter Bcr/CflA subfamily
YP_970255.1	PFAM: protein of unknown function DUF461; KEGG: eba:ebA6147 hypothetical protein
YP_970256.1	KEGG: rfr:Rfer_0616 hypothetical protein
YP_970257.1	TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor; regulatory protein, LacI; sigma-54 factor, core-binding region; sigma-54, DNA-binding domain protein; KEGG: tbd:Tbd_0732 RNA polymease sigma-54 factor protein
YP_970258.1	PFAM: response regulator receiver; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAC repeat-containing protein; KEGG: ade:Adeh_3183 signal transduction histidine kinase
YP_970259.1	PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: rso:RS02226 probable sigma-54 interacting response regulator transcription regulator protein
YP_970260.1	KEGG: pol:Bpro_1739 hypothetical protein
YP_970261.1	KEGG: ppr:PBPRB0091 hypothetical protein
YP_970263.1	KEGG: rso:RSp0990 probable TIS1421-transposase orfA protein
YP_970264.1	KEGG: eba:ebA5933 transposition helper protein
YP_970265.1	PFAM: Integrase, catalytic region; KEGG: eba:ebA5932 transposase
YP_970266.1	PFAM: transposase, IS4 family protein; KEGG: cvi:CV0957 TIS1421-transposase protein B
YP_970267.1	KEGG: bps:BPSL0752 hypothetical protein
YP_970268.1	KEGG: bps:BPSL0751 hypothetical protein
YP_970269.1	TIGRFAM: guanosine monophosphate reductase; PFAM: IMP dehydrogenase/GMP reductase; KEGG: pol:Bpro_1718 guanosine monophosphate reductase
YP_970270.1	KEGG: rfr:Rfer_3036 hypothetical protein
YP_970271.1	PFAM: uncharacterized protein UPF0065; KEGG: rme:Rmet_5221 twin-arginine translocation pathway signal
YP_970272.1	PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: psb:Psyr_2261 peptidase M20:peptidase M20
YP_970273.1	PFAM: sugar isomerase (SIS); KEGG: atc:AGR_C_3888 hypothetical protein
YP_970274.1	PFAM: UvrD/REP helicase; KEGG: pol:Bpro_1723 UvrD/REP helicase
YP_970275.1	PFAM: phage Tail Collar domain protein; KEGG: mxa:MXAN_0326 phage tail collar domain protein
YP_970276.1	KEGG: pol:Bpro_1622 extracellular ligand-binding receptor
YP_970277.1	KEGG: pfo:Pfl_0164 hypothetical protein
YP_970278.1	PFAM: Aspartyl/Asparaginyl beta-hydroxylase; KEGG: pen:PSEEN0741 hypothetical protein
YP_970279.1	PFAM: Collagen triple helix repeat; KEGG: dsy:DSY0622 hypothetical protein
YP_970280.1	KEGG: dar:Daro_1057 twin-arginine translocation pathway signal
YP_970281.1	KEGG: hch:HCH_00181 predicted periplasmic lipoprotein
YP_970282.1	PFAM: protein of unknown function DUF1111; KEGG: pae:PA4371 hypothetical protein
YP_970283.1	KEGG: pae:PA4370 putative iron-regulated protein
YP_970284.1	KEGG: reu:Reut_B5110 putative exported alkaline phosphatase
YP_970285.1	KEGG: pol:Bpro_1726 hypothetical protein
YP_970286.1	catalyzes the formation of O-phospho-L-homoserine from L-homoserine
YP_970287.1	KEGG: pol:Bpro_1728 hypothetical protein
YP_970288.1	KEGG: pol:Bpro_1729 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; 3'-5' exonuclease; SMART: Helix-hairpin-helix domain protein, class 2
YP_970289.1	KEGG: bte:BTH_II1774 serine protease, subtilase family
YP_970290.1	KEGG: rru:Rru_B0036 hypothetical protein
YP_970293.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: pol:Bpro_1998 transcriptional regulator, LysR family
YP_970294.1	PFAM: FAD dependent oxidoreductase; KEGG: pol:Bpro_1999 D-amino-acid dehydrogenase
YP_970295.1	PFAM: extracellular solute-binding protein, family 3; KEGG: pol:Bpro_2000 extracellular solute-binding protein, family 3
YP_970296.1	KEGG: bur:Bcep18194_B0200 integral membrane protein-like
YP_970297.1	KEGG: nmu:Nmul_A2144 NAD-dependent epimerase/dehydratase
YP_970298.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; KEGG: bur:Bcep18194_B0199 NAD-dependent epimerase/dehydratase
YP_970299.1	PFAM: putative thiol-disulphide oxidoreductase DCC; KEGG: syw:SYNW1791 hypothetical protein
YP_970300.1	KEGG: cvi:CV2106 probable transcriptional regulator
YP_970301.1	PFAM: dienelactone hydrolase; KEGG: pol:Bpro_1733 carboxymethylenebutenolidase
YP_970302.1	PFAM: zinc/iron permease; KEGG: pol:Bpro_1734 zinc/iron permease
YP_970303.1	PFAM: fumarate lyase; KEGG: reu:Reut_A1775 argininosuccinate lyase
YP_970304.1	PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: bcn:Bcen_2208 transposase IS116/IS110/IS902
YP_970305.1	PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: pol:Bpro_3670 transcriptional regulator, LytR/AlgR family
YP_970306.1	PFAM: ATP-binding region, ATPase domain protein; histidine kinase internal region; KEGG: rfr:Rfer_1711 histidine kinase internal protein
YP_970307.1	catalyzes the formation of arginine from (N-L-arginino)succinate
YP_970308.1	PFAM: uncharacterized protein UPF0065; KEGG: rfr:Rfer_3194 uncharacterized protein UPF0065
YP_970309.1	PFAM: lipolytic enzyme, G-D-S-L family; KEGG: xcv:XCV0889 putative secreted protein
YP_970310.1	KEGG: mxa:MXAN_3446 acyltransferase family protein
YP_970311.1	PFAM: alpha-2-macroglobulin domain protein; KEGG: reu:Reut_A3385 alpha-2-macroglobulin, N-terminal
YP_970312.1	KEGG: rso:RSc0762 hypothetical protein
YP_970313.1	PFAM: protein of unknown function DUF1486; KEGG: xcb:XC_0369 hypothetical protein
YP_970314.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; CHASE3 domain protein; KEGG: rfr:Rfer_2225 methyl-accepting chemotaxis sensory transducer
YP_970315.1	TIGRFAM: penicillin-binding protein 1C; PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; Penicillin-binding domain protein; KEGG: rme:Rmet_3529 penicillin-binding protein 1C
YP_970316.1	PFAM: protein of unknown function DUF6, transmembrane; KEGG: bxe:Bxe_B1987 hypothetical protein
YP_970317.1	PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: bpe:BP0484 L-lactate dehydrogenase
YP_970318.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rfr:Rfer_0925 methyl-accepting chemotaxis sensory transducer
YP_970319.1	KEGG: pfo:Pfl_3745 hypothetical protein
YP_970320.1	KEGG: hne:HNE_2582 hypothetical protein
YP_970321.1	PFAM: globin; KEGG: hch:HCH_01422 truncated hemoglobin
YP_970322.1	PFAM: UMUC domain protein DNA-repair protein; KEGG: pol:Bpro_3696 DNA-directed DNA polymerase
YP_970324.1	SMART: helix-turn-helix- domain containing protein, AraC type; KEGG: rfr:Rfer_2523 transcriptional regulator, AraC family
YP_970325.1	PFAM: ThiJ/PfpI domain protein; KEGG: rfr:Rfer_2521 ThiJ/PfpI
YP_970326.1	PFAM: isochorismatase hydrolase; KEGG: rfr:Rfer_2520 isochorismatase hydrolase
YP_970327.1	KEGG: rme:Rmet_5901 hypothetical protein
YP_970328.1	catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis
YP_970329.1	PFAM: Chromosomal replication initiator, DnaA; KEGG: pol:Bpro_3564 chromosomal replication initiator, DnaA
YP_970330.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; KEGG: rfr:Rfer_2510 HAD-superfamily subfamily IB, PSPase-like
YP_970331.1	TIGRFAM: poly(A) polymerase; PFAM: Polynucleotide adenylyltransferase region; KEGG: rfr:Rfer_2509 poly(A) polymerase
YP_970332.1	TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; KEGG: rfr:Rfer_2508 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
YP_970333.1	PFAM: uncharacterized protein UPF0065; KEGG: rfr:Rfer_3300 uncharacterized protein UPF0065
YP_970334.1	KEGG: tbd:Tbd_2742 hypothetical protein
YP_970335.1	catalyzes the formation of 3,6-dideoxy-D-glycero-D-glycero-4-hexulose
YP_970336.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: pol:Bpro_3789 NAD-dependent epimerase/dehydratase
YP_970337.1	KEGG: aor:AO090026000829 synaptic vesicle protein EHS-1 and related EH domain protein Pfam: DUF1720 efhand PspA_IM30 E3_binding Striatin TolA E-MAP-115 Vicilin_N Extensin_2 WH2 PROSITE: GLN_RICH GLU_RICH PRO_RICH EH WH2
YP_970338.1	KEGG: dre:327336 zgc:56208
YP_970339.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rfr:Rfer_4069 L-carnitine dehydratase/bile acid-inducible protein F
YP_970340.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rfr:Rfer_4070 acyl-CoA dehydrogenase-like
YP_970341.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rfr:Rfer_4071 transcriptional regulator, LysR family
YP_970344.1	KEGG: eba:ebA7089 hypothetical protein
YP_970345.1	catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide
YP_970346.1	PFAM: NUDIX hydrolase; KEGG: pol:Bpro_3725 NUDIX hydrolase
YP_970347.1	PFAM: SirA family protein; KEGG: pol:Bpro_3724 SirA-like
YP_970348.1	PFAM: Integrase, catalytic region; KEGG: bpa:BPP2353 IS1002 transposase
YP_970349.1	TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: pol:Bpro_3723 UTP-glucose-1-phosphate uridylyltransferase
YP_970350.1	TIGRFAM: valyl-tRNA synthetase; KEGG: rfr:Rfer_2376 valyl-tRNA synthetase
YP_970351.1	PFAM: peptidase M48, Ste24p; KEGG: mxa:MXAN_5412 hypothetical protein
YP_970352.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pol:Bpro_3717 glyoxalase/bleomycin resistance protein/dioxygenase
YP_970353.1	PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pfl:PFL_3416 ABC transporter ATP-binding protein
YP_970354.1	PFAM: HemY domain protein; KEGG: pol:Bpro_3661 putative porphyrin biosynthesis related protein
YP_970355.1	PFAM: protein of unknown function DUF513, hemX; KEGG: rfr:Rfer_1717 protein of unknown function DUF513, HemX
YP_970356.1	KEGG: rfr:Rfer_1716 uroporphyrinogen III synthase
YP_970357.1	transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis
YP_970358.1	catalyzes the formation of oxaloacetate from phosphoenolpyruvate
YP_970359.1	TIGRFAM: hypothetical membrane protein; integral membrane protein, YccS/YhfK family; PFAM: protein of unknown function DUF893, YccS/YhfK; KEGG: pfo:Pfl_5250 intergral membrane protein
YP_970360.1	PFAM: protein of unknown function UPF0118; KEGG: pol:Bpro_3669 protein of unknown function UPF0118
YP_970361.1	KEGG: dde:Dde_2399 hypothetical protein
YP_970362.1	KEGG: mfa:Mfla_2213 hypothetical protein
YP_970363.1	With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems
YP_970364.1	PFAM: flagellar transcriptional activator; KEGG: rfr:Rfer_3700 flagellar transcriptional activator FlhD
YP_970365.1	KEGG: ppu:PP_0222 monooxygenase, DszA family
YP_970366.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: bxe:Bxe_B1544 hypothetical protein
YP_970367.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: bxe:Bxe_B1545 hypothetical protein
YP_970368.1	PFAM: Rhodanese domain protein; KEGG: pol:Bpro_1742 3-mercaptopyruvate sulfurtransferase
YP_970369.1	KEGG: pol:Bpro_1743 putative transmembrane protein
YP_970370.1	PFAM: Rieske [2Fe-2S] domain protein; KEGG: rfr:Rfer_2878 Rieske (2Fe-2S) protein
YP_970371.1	TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII, small subunit; KEGG: pol:Bpro_1745 exonuclease VII, small subunit
YP_970372.1	PFAM: Polyprenyl synthetase; KEGG: pol:Bpro_1746 polyprenyl synthetase
YP_970373.1	catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate
YP_970374.1	PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: pol:Bpro_1749 twin-arginine translocation pathway signal
YP_970375.1	KEGG: pol:Bpro_1751 hypothetical protein
YP_970376.1	TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: pol:Bpro_1752 TRAP dicarboxylate transporter-DctM subunit
YP_970377.1	PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: pol:Bpro_1753 tripartite ATP-independent periplasmic transporter, DctQ component
YP_970378.1	PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: bcn:Bcen_2208 transposase IS116/IS110/IS902
YP_970379.1	PFAM: Conserved TM helix repeat-containing protein; KEGG: rfr:Rfer_2159 conserved TM helix
YP_970380.1	KEGG: rfr:Rfer_2160 trehalose synthase-like; TIGRFAM: trehalose synthase; trehalose synthase-fused possible maltokinase; PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain
YP_970381.1	PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: rfr:Rfer_2161 alpha amylase
YP_970382.1	catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain
YP_970383.1	TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; KEGG: cvi:CV4302 high-affinity choline transport protein
YP_970384.1	KEGG: eba:ebA2719 molybdenum import ATP-binding protein; TIGRFAM: molybdate ABC transporter, ATPase subunit; PFAM: ABC transporter-related protein; TOBE domain protein; SMART: AAA ATPase
YP_970385.1	TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tbd:Tbd_1284 molybdate ABC transporter, permease protein
YP_970386.1	TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: pae:PA1863 molybdate transport system substrate-binding protein
YP_970387.1	KEGG: reu:Reut_C6375 hypothetical protein
YP_970388.1	PFAM: regulatory protein, LysR; TOBE domain protein; KEGG: rfr:Rfer_2857 putative transcriptional regulator, ModE family
YP_970390.1	KEGG: rfr:Rfer_3383 ABC transporter-related protein
YP_970391.1	KEGG: rfr:Rfer_3937 methyl-accepting chemotaxis sensory transducer
YP_970392.1	PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: rso:RSc1352 probable two-component response regulator transcription regulator protein
YP_970393.1	PFAM: ATP-binding region, ATPase domain protein; histidine kinase internal region; KEGG: reu:Reut_A1966 ATP-binding region, ATPase-like:histidine kinase internal region
YP_970395.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: pol:Bpro_2826 secretion protein HlyD
YP_970396.1	PFAM: acriflavin resistance protein; KEGG: pol:Bpro_2827 acriflavin resistance protein
YP_970397.1	PFAM: acriflavin resistance protein; KEGG: pol:Bpro_2828 acriflavin resistance protein
YP_970398.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: pol:Bpro_2829 RND efflux system, outer membrane lipoprotein, NodT
YP_970399.1	BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell
YP_970400.1	KEGG: cvi:CV1620 hypothetical protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_970401.1	PFAM: FAD linked oxidase domain protein; Berberine/berberine domain protein; KEGG: sil:SPOA0208 oxidoreductase, FAD-binding
YP_970402.1	PFAM: alpha/beta hydrolase fold; KEGG: rfr:Rfer_1830 alpha/beta hydrolase
YP_970403.1	PFAM: 20S proteasome, A and B subunits; KEGG: rfr:Rfer_1831 hypothetical protein
YP_970404.1	PFAM: Rhs element Vgr protein; KEGG: bps:BPSS2093 hypothetical protein
YP_970405.1	PFAM: Gp5 domain protein; KEGG: pae:PA2685 hypothetical protein
YP_970406.1	TIGRFAM: YD repeat protein; PFAM: RHS protein; YD repeat-containing protein; KEGG: ecs:ECs2061 RhsE
YP_970408.1	Catalyzes a key regulatory step in fatty acid biosynthesis
YP_970409.1	This protein performs the mismatch recognition step during the DNA repair process
YP_970410.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: bur:Bcep18194_A4489 TonB-dependent siderophore receptor
YP_970411.1	KEGG: mes:Meso_2911 hypothetical protein
YP_970412.1	KEGG: mes:Meso_2912 hypothetical protein
YP_970413.1	KEGG: mpa:MAP3620c hypothetical protein
YP_970415.1	KEGG: mes:Meso_2898 hypothetical protein
YP_970416.1	KEGG: pen:PSEEN3112 hypothetical protein
YP_970417.1	PFAM: cytochrome B561; KEGG: bcn:Bcen_6481 cytochrome b561
YP_970418.1	PFAM: MscS Mechanosensitive ion channel; KEGG: reu:Reut_B4345 MscS mechanosensitive ion channel
YP_970419.1	KEGG: mag:amb1841 hypothetical protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_970420.1	PFAM: response regulator receiver; metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: syn:slr2100 two-component response regulator
YP_970421.1	PFAM: glycosyl transferase, group 1; KEGG: aeh:Mlg_2350 glycosyl transferase, group 1
YP_970422.1	PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: aeh:Mlg_2321 ABC transporter-related protein
YP_970423.1	PFAM: glycosyltransferase sugar-binding region containing DXD motif; KEGG: cme:CMS086C hypothetical protein, conserved Pfam: Gly_transf_sug
YP_970424.1	KEGG: aeh:Mlg_2351 hypothetical protein
YP_970425.1	PFAM: glycosyl transferase, family 2; KEGG: dge:Dgeo_0345 glycosyl transferase, family 2
YP_970426.1	PFAM: inositol monophosphatase; KEGG: rfr:Rfer_2892 inositol-1(or 4)-monophosphatase
YP_970427.1	PFAM: protein of unknown function DUF990; KEGG: reu:Reut_A1067 protein of unknown function DUF990
YP_970428.1	KEGG: reu:Reut_A1068 putative ABC transporter permease protein
YP_970429.1	PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: reu:Reut_A1069 ABC transporter-related protein
YP_970430.1	PFAM: glycosyl transferase, family 20; KEGG: rso:RS01697 probable trehalose-6-phosphate synthase (alpha,alpha-trehalose-phosphate synthase UDP-forming) protein
YP_970431.1	PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: pol:Bpro_3292 RNA methyltransferase TrmH, group 1
YP_970432.1	TIGRFAM: serine O-acetyltransferase; KEGG: pol:Bpro_3291 serine O-acetyltransferase
YP_970433.1	TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; KEGG: pol:Bpro_3289 molybdopterin binding domain
YP_970434.1	PFAM: protein of unknown function DUF615; KEGG: rfr:Rfer_2888 protein of unknown function DUF615
YP_970435.1	PFAM: peptidase U62, modulator of DNA gyrase; KEGG: rfr:Rfer_2887 peptidase U62, modulator of DNA gyrase
YP_970436.1	KEGG: reu:Reut_B4276 HpcH/HpaI aldolase; TIGRFAM: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; PFAM: HpcH/HpaI aldolase
YP_970437.1	TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: bpe:BP0757 succinate-semialdehyde dehydrogenase [NADP+]
YP_970438.1	PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain; KEGG: pol:Bpro_3576 altronate dehydratase
YP_970439.1	PFAM: uncharacterized protein UPF0065; KEGG: pol:Bpro_3575 uncharacterized protein UPF0065
YP_970440.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: pol:Bpro_3574 transcriptional regulator, LysR family
YP_970441.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: rme:Rmet_4810 major facilitator superfamily MFS_1
YP_970442.1	PFAM: Patatin; KEGG: xom:XOO_4256 hypothetical protein
YP_970443.1	KEGG: rso:RSp1612 probable tartrate dehydrogenase oxidoreductase protein; TIGRFAM: tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase
YP_970444.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bbr:BB4538 LysR family regulatory protein
YP_970445.1	PFAM: Helix-turn-helix, type 11 domain protein; KEGG: xcv:XCV1347 putative transcriptional regulator
YP_970446.1	PFAM: glutathione S-transferase, N-terminal domain; KEGG: xcv:XCV1348 glutathione transferase
YP_970447.1	PFAM: GatB/Yqey domain protein; KEGG: pol:Bpro_3285 GatB/YqeY
YP_970448.1	a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA
YP_970449.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: cvi:CV0462 hypothetical protein
YP_970450.1	PFAM: NIPSNAP family containing protein; KEGG: bxe:Bxe_B1182 hypothetical protein
YP_970451.1	PFAM: regulatory protein, ArsR; KEGG: sma:SAV6598 ArsR-family transcriptional regulator
YP_970452.1	PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rfr:Rfer_2884 HI0933-like protein
YP_970453.1	PFAM: Sterol desaturase; KEGG: rso:RS01698 probable transmembrane protein
YP_970454.1	PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: mca:MCA1443 sulfate transporter family protein
YP_970455.1	PFAM: carbonic anhydrase; KEGG: rso:RS03010 putative carbonic anhydrase protein
YP_970456.1	PFAM: thioesterase superfamily protein; KEGG: dar:Daro_3519 thioesterase superfamily
YP_970457.1	PFAM: glycoside hydrolase, family 5; cellulose-binding, family II; KEGG: xcb:XC_0639 cellulase
YP_970458.1	TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: rfr:Rfer_2883 uroporphyrin-III C-methyltransferase
YP_970459.1	PFAM: glycosyl transferase, family 3; KEGG: pol:Bpro_3280 glycosyl transferase, family 3
YP_970460.1	PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: pol:Bpro_3279 molybdopterin oxidoreductase
YP_970461.1	TIGRFAM: nitrite reductase [NAD(P)H], small subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: pol:Bpro_3278 nitrite reductase (NAD(P)H) large subunit, NirD
YP_970462.1	TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: rfr:Rfer_2557 nitrite reductase (NAD(P)H) large subunit, NirB
YP_970463.1	PFAM: chemotaxis sensory transducer; KEGG: rfr:Rfer_3937 methyl-accepting chemotaxis sensory transducer
YP_970464.1	KEGG: rso:RS05358 hypothetical protein
YP_970465.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: eba:ebA1973 outer membrane protein OprM precursor
YP_970466.1	TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: psp:PSPPH_2379 multidrug efflux transporter
YP_970467.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: dvu:DVU2817 multidrug resistance protein
YP_970468.1	KEGG: tbd:Tbd_2406 chemotaxis sensory transducer; TIGRFAM: PAS sensor protein; PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAC repeat-containing protein
YP_970469.1	PFAM: CBS domain containing protein; KEGG: bxe:Bxe_B1676 signal-transduction protein containing CBS domains
YP_970470.1	PFAM: luciferase family protein; KEGG: rso:RS03171 putative luciferase (monooxygenase) oxidoreductase protein
YP_970471.1	PFAM: carboxyl transferase; KEGG: psb:Psyr_1538 propionyl-CoA carboxylase
YP_970472.1	PFAM: glycoside hydrolase, family 37; KEGG: spt:SPA3459 cytoplasmic trehalase
YP_970473.1	PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; Hpt domain protein; KEGG: bcn:Bcen_4298 putative CheA signal transduction histidine kinase
YP_970474.1	KEGG: bur:Bcep18194_B1978 methyl-accepting chemotaxis sensory transducer
YP_970475.1	KEGG: bur:Bcep18194_B1977 hypothetical protein
YP_970476.1	PFAM: response regulator receiver; KEGG: bxe:Bxe_B3007 response regulator receiver domain protein(CheY)
YP_970477.1	TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: rme:Rmet_4910 exodeoxyribonuclease III (xth)
YP_970478.1	TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter-related protein; KEGG: bxe:Bxe_A0918 excinuclease ABC, A subunit
YP_970479.1	PFAM: major facilitator superfamily MFS_1; KEGG: ppu:PP_2366 antibiotic MFS transporter, putative
YP_970481.1	PFAM: Rhs element Vgr protein; KEGG: pae:PA0095 hypothetical protein
YP_970482.1	KEGG: bxe:Bxe_A4428 hypothetical protein
YP_970483.1	KEGG: bxe:Bxe_A4427 hypothetical protein
YP_970484.1	KEGG: bxe:Bxe_A4426 rhs family protein
YP_970488.1	PFAM: Integrase, catalytic region; KEGG: eba:ebA5932 transposase
YP_970489.1	KEGG: eba:ebA5933 transposition helper protein
YP_970490.1	PFAM: Integrase, catalytic region; KEGG: bpa:BPP2353 IS1002 transposase
YP_970491.1	PFAM: protein of unknown function DUF6, transmembrane; KEGG: rru:Rru_A3577 protein of unknown function DUF6, transmembrane
YP_970492.1	PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzyme; KEGG: bte:BTH_I2263 cystathionine beta-lyase
YP_970493.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cvi:CV1741 hypothetical protein
YP_970494.1	PFAM: RNP-1 like RNA-binding protein; KEGG: pol:Bpro_4894 RNA-binding region RNP-1 (RNA recognition motif)
YP_970495.1	KEGG: mfa:Mfla_0538 hypothetical protein
YP_970496.1	KEGG: pol:Bpro_0287 hypothetical protein
YP_970497.1	PFAM: bifunctional deaminase-reductase domain protein; KEGG: pol:Bpro_0286 bifunctional deaminase-reductase-like
YP_970498.1	KEGG: pol:Bpro_3269 nitrate transport ATP-binding subunits C and D; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter-related protein; SMART: AAA ATPase
YP_970499.1	TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_3268 nitrate transport permease
YP_970500.1	KEGG: pol:Bpro_3267 twin-arginine translocation pathway signal
YP_970502.1	PFAM: ANTAR domain protein; KEGG: pol:Bpro_3266 response regulator receiver (CheY-like) and ANTAR domain protein
YP_970503.1	in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity
YP_970504.1	PFAM: CS; KEGG: pol:Bpro_3264 heat shock protein HSP20
YP_970505.1	KEGG: bte:BTH_I2816 hypothetical protein
YP_970506.1	KEGG: rfr:Rfer_1487 putative transporter signal peptide protein
YP_970508.1	TIGRFAM: polymorphic outer membrane protein; PFAM: Polymorphic membrane protein, Chlamydia; KEGG: xom:XOO_0911 hypothetical protein
YP_970509.1	PFAM: regulatory protein, TetR; KEGG: bbr:BB3388 putative transcriptional regulator
YP_970510.1	PFAM: major facilitator superfamily MFS_1; KEGG: spt:SPA1294 methyl viologen resistance protein SmvA
YP_970511.1	PFAM: NnrS family protein; KEGG: pol:Bpro_4727 NnrS
YP_970512.1	TIGRFAM: lytic murein transglycosylase B; KEGG: rfr:Rfer_2545 lytic murein transglycosylase B
YP_970513.1	PFAM: transglutaminase domain protein; KEGG: rfr:Rfer_2531 transglutaminase-like
YP_970514.1	PFAM: protein of unknown function DUF58; KEGG: pol:Bpro_3147 protein of unknown function DUF58
YP_970515.1	PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: rfr:Rfer_2529 AAA_3 ATPase
YP_970516.1	PFAM: histone deacetylase superfamily; KEGG: pol:Bpro_3145 histone deacetylase superfamily
YP_970517.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: reu:Reut_A2554 enoyl-CoA hydratase/isomerase
YP_970518.1	PFAM: peptidase C55; KEGG: xcv:XCV0471 avirulence protein AvrRxv
YP_970519.1	PFAM: MscS Mechanosensitive ion channel; KEGG: pol:Bpro_3144 MscS mechanosensitive ion channel
YP_970520.1	PFAM: electron transfer flavoprotein beta-subunit; KEGG: bbr:BB0620 electron transfer flavoprotein beta-subunit
YP_970521.1	PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein, alpha subunit; KEGG: bbr:BB0621 electron transfer flavoprotein alpha-subunit
YP_970522.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: pol:Bpro_3141 acyl-CoA dehydrogenase-like
YP_970523.1	PFAM: 2-nitropropane dioxygenase, NPD; KEGG: rfr:Rfer_1960 2-nitropropane dioxygenase, NPD
YP_970524.1	PFAM: acyltransferase 3; KEGG: pol:Bpro_3139 acyltransferase 3
YP_970525.1	KEGG: xcv:XCVd0104 avirulence protein AvrBs1
YP_970526.1	KEGG: ecs:ECs1127 hypothetical protein
YP_970527.1	KEGG: dar:Daro_0127 hypothetical protein
YP_970528.1	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: pol:Bpro_3135 radical SAM
YP_970529.1	KEGG: lma:LmjF35.0540 proteophosphoglycan 5
YP_970530.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pol:Bpro_0045 HAD-superfamily hydrolase, subfamily IA, variant 2
YP_970531.1	KEGG: pol:Bpro_0044 peptidase M20D, amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein
YP_970532.1	PFAM: regulatory protein, AsnC/Lrp family; KEGG: pol:Bpro_0051 transcriptional regulator, AsnC family
YP_970533.1	PFAM: aminotransferase class-III; KEGG: pol:Bpro_0052 aminotransferase class-III
YP_970534.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: bcn:Bcen_6449 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
YP_970535.1	PFAM: protein of unknown function DUF861, cupin_3; KEGG: nar:Saro_2687 protein of unknown function DUF861, cupin_3
YP_970536.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pol:Bpro_0054 GCN5-related N-acetyltransferase
YP_970537.1	TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pol:Bpro_0056 haloacid dehalogenase, type II
YP_970538.1	PFAM: FAD dependent oxidoreductase; KEGG: pol:Bpro_0057 FAD dependent oxidoreductase
YP_970539.1	PFAM: extracellular solute-binding protein, family 5; KEGG: pol:Bpro_0058 extracellular solute-binding protein, family 5
YP_970540.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_0059 binding-protein-dependent transport systems inner membrane component
YP_970541.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_0060 binding-protein-dependent transport systems inner membrane component
YP_970542.1	PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_0061 ABC transporter-related protein
YP_970543.1	KEGG: rso:RSp1612 probable tartrate dehydrogenase oxidoreductase protein; TIGRFAM: tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase
YP_970544.1	KEGG: bpe:BP0757 succinate-semialdehyde dehydrogenase [NADP+]; TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase
YP_970545.1	PFAM: sulfatase; protein of unknown function DUF1705; KEGG: pol:Bpro_3130 sulfatase
YP_970546.1	PFAM: putative esterase; KEGG: rfr:Rfer_0122 carboxylesterase
YP_970547.1	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pol:Bpro_3129 alcohol dehydrogenase, zinc-binding
YP_970548.1	PFAM: helix-turn-helix- domain containing protein, AraC type; ThiJ/PfpI domain protein; KEGG: bpm:BURPS1710b_1023 AraC family transcriptional regulator
YP_970549.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bha:BH0699 ribosomal-protein-alanine N-acetyltransferase
YP_970550.1	KEGG: bur:Bcep18194_B2977 hypothetical protein
YP_970551.1	type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH
YP_970552.1	PFAM: protein of unknown function DUF339; KEGG: pol:Bpro_3604 protein of unknown function DUF339
YP_970553.1	KEGG: pol:Bpro_3603 succinate dehydrogenase and fumarate reductase iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: ferredoxin
YP_970554.1	KEGG: pol:Bpro_3602 succinate dehydrogenase, flavoprotein subunit; TIGRFAM: succinate dehydrogenase, flavoprotein subunit; succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_970555.1	TIGRFAM: TonB box domain protein; KEGG: pol:Bpro_3601 succinate dehydrogenase, cytochrome b subunit
YP_970556.1	PFAM: succinate dehydrogenase, cytochrome b subunit; KEGG: pol:Bpro_3600 succinate dehydrogenase, cytochrome b subunit
YP_970557.1	PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated domain protein; KEGG: pol:Bpro_3599 transcriptional regulator, GntR family
YP_970558.1	catalyzes the oxidation of malate to oxaloacetate
YP_970559.1	catalyzes the formation of (E)-3-(methoxycarbonyl)pent-2-enedioate and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and trans-aconitate
YP_970560.1	PFAM: HpcH/HpaI aldolase; KEGG: pol:Bpro_3597 HpcH/HpaI aldolase
YP_970561.1	KEGG: pol:Bpro_3596 hypothetical protein
YP_970562.1	catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate
YP_970563.1	in Escherichia coli SbmA is involved in uptake of microcin J25; functions along with FhuA, TonB, and ExbB/D in this capacity; in Sinorhizobium meliloti, BacA is essential and required for symbiosis; defects appear to affect the cell envelope
YP_970564.1	PFAM: helix-turn-helix domain protein; KEGG: pol:Bpro_3594 transcriptional regulator, XRE family
YP_970565.1	KEGG: pol:Bpro_3593 hypothetical protein
YP_970566.1	PFAM: peptidase U32; KEGG: cvi:CV1955 probable protease
YP_970567.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bpa:BPP1036 LysR-family transcriptional regulator
YP_970568.1	PFAM: protein of unknown function DUF81; KEGG: bbr:BB1250 putative membrane protein
YP_970569.1	PFAM: response regulator receiver; helix-turn-helix, Fis-type; KEGG: abo:ABO_2031 response regulator
YP_970570.1	PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; KEGG: abo:ABO_2032 two-component, sensor histidine protein kinase, putative
YP_970571.1	PFAM: Surfeit locus 1 family protein; KEGG: rpb:RPB_0238 surfeit protein
YP_970572.1	PFAM: cytochrome C oxidase subunit IV; KEGG: bja:blr0152 cytochrome O ubiquinol oxidase subunit IV
YP_970573.1	PFAM: cytochrome c oxidase, subunit III; KEGG: atc:AGR_C_225 bo-type ubiquinol oxidase chain III
YP_970574.1	PFAM: cytochrome c oxidase, subunit I; KEGG: bpe:BP2730 cytochrome ubiquinol oxidase subunit I
YP_970575.1	TIGRFAM: ubiquinol oxidase, subunit II; PFAM: cytochrome c oxidase, subunit II; COX aromatic rich domain protein; KEGG: rme:Rmet_5608 ubiquinol oxidase, subunit II
YP_970576.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bpe:BP2732 putative membrane transport protein
YP_970577.1	TIGRFAM: TonB family protein; PFAM: TolA family protein; KEGG: rfr:Rfer_1159 TonB-like
YP_970578.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: rfr:Rfer_2673 biopolymer transport protein ExbD/TolR
YP_970579.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: pol:Bpro_2890 MotA/TolQ/ExbB proton channel
YP_970580.1	TIGRFAM: 4-hydroxybenzoyl-CoA thioesterase; PFAM: thioesterase superfamily protein; KEGG: pol:Bpro_2889 4-hydroxybenzoyl-CoA thioesterase
YP_970581.1	PFAM: aminotransferase, class I and II; KEGG: pol:Bpro_2888 aminotransferase, class I and II
YP_970582.1	TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: pol:Bpro_2887 NusB antitermination factor
YP_970583.1	RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not
YP_970584.1	PFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; KEGG: pol:Bpro_2885 3,4-dihydroxy-2-butanone 4-phosphate synthase
YP_970585.1	KEGG: pol:Bpro_3072 hypothetical protein
YP_970586.1	PFAM: ferredoxin; KEGG: rfr:Rfer_1389 ferredoxin
YP_970587.1	PFAM: protein of unknown function DUF427; KEGG: pol:Bpro_3460 protein of unknown function DUF427
YP_970588.1	KEGG: cvi:CV0473 probable sensor histidine kinase protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_970589.1	SMART: extracellular solute-binding protein, family 3; KEGG: mag:amb2290 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
YP_970590.1	PFAM: response regulator receiver; KEGG: mfa:Mfla_1281 response regulator receiver domain protein (CheY-like)
YP_970591.1	TIGRFAM: DNA binding domain, excisionase family; PFAM: regulatory protein, MerR; response regulator receiver; KEGG: reu:Reut_B5042 excisionase/Xis, DNA-binding
YP_970592.1	PFAM: response regulator receiver; KEGG: xcv:XCV0528 two-component system sensor protein
YP_970593.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: bxe:Bxe_B2682 methyl-accepting chemotaxis sensory transducer
YP_970594.1	KEGG: xcb:XC_3476 hypothetical protein
YP_970595.1	PFAM: protein of unknown function DUF893, YccS/YhfK; KEGG: rme:Rmet_3187 protein of unknown function DUF893, YccS/YhfK
YP_970596.1	PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein; Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; KEGG: psp:PSPPH_1958 galactonate dehydratase
YP_970597.1	PFAM: KDPG and KHG aldolase; KEGG: rfr:Rfer_0950 KDPG and KHG aldolase
YP_970598.1	PFAM: 2-keto-3-deoxy-galactonokinase; KEGG: psb:Psyr_1987 2-keto-3-deoxy-galactonokinase
YP_970599.1	PFAM: dihydrodipicolinate synthetase; KEGG: bte:BTH_II1630 dihydrodipicolinate synthase, putative
YP_970600.1	catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate
YP_970601.1	membrane component of a putative sugar ABC transporter system
YP_970602.1	PFAM: inner-membrane translocator; KEGG: bcn:Bcen_5625 inner-membrane translocator
YP_970603.1	PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: bcn:Bcen_5626 ABC transporter-related protein
YP_970604.1	PFAM: inner-membrane translocator; KEGG: mes:Meso_0840 inner-membrane translocator
YP_970605.1	PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: mlo:mll5657 sugar ABC transporter (ATP-binding protein)
YP_970606.1	KEGG: bms:BRA0937 sugar ABC transporter, periplasmic sugar-binding protein
YP_970607.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bte:BTH_I2342 periplasmic ribose-binding protein
YP_970608.1	PFAM: aldehyde dehydrogenase; KEGG: bpe:BP0207 putative aldehyde dehydrogenase
YP_970609.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bur:Bcep18194_B0040 transcriptional regulator, LysR family
YP_970610.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mlo:mll7191 putative oxidoreductase
YP_970611.1	PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: mxa:MXAN_3250 senescence marker protein-30 family protein
YP_970612.1	PFAM: Aldose 1-epimerase; KEGG: bur:Bcep18194_A3707 aldose 1-epimerase
YP_970613.1	KEGG: xac:XAC2009 hypothetical protein
YP_970614.1	TIGRFAM: glutamate--cysteine ligase; KEGG: pol:Bpro_3399 glutamate--cysteine ligase, monofunctional
YP_970615.1	catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; also known as acetolactate synthase large subunit
YP_970616.1	KEGG: gvi:glr1927 unknown protein
YP_970617.1	KEGG: mhu:Mhun_1889 hypothetical protein
YP_970618.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: mag:amb2263 putative threonine efflux protein
YP_970619.1	PFAM: GAF domain protein; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; KEGG: gvi:gll1816 two-component sensor histidine kinase
YP_970620.1	KEGG: pol:Bpro_3398 hypothetical protein
YP_970621.1	KEGG: pol:Bpro_3397 hypothetical protein
YP_970622.1	HSR1-related protein; PFAM: GTP-binding protein, HSR1-related; KEGG: rfr:Rfer_1388 GTP-binding
YP_970623.1	PFAM: porin, Gram-negative type; KEGG: rso:RSc2136 probable porin signal peptide protein
YP_970624.1	PFAM: regulatory protein, IclR; KEGG: bxe:Bxe_B2965 transcriptional regulator, IclR family
YP_970625.1	KEGG: pol:Bpro_3354 hypothetical protein
YP_970626.1	PFAM: major facilitator superfamily MFS_1; KEGG: ecs:ECs3543 putative transport protein
YP_970627.1	PFAM: Endoribonuclease L-PSP; KEGG: rme:Rmet_4539 endoribonuclease L-PSP
YP_970628.1	TIGRFAM: redox-sensitive transcriptional activator SoxR; PFAM: regulatory protein, MerR; KEGG: rme:Rmet_4538 transcriptional regulator, MerR family
YP_970629.1	PFAM: MgtC/SapB transporter; KEGG: bbr:BB4258 putative Mg(2+) transporter
YP_970630.1	PFAM: pseudouridine synthase; KEGG: cvi:CV2346 probable pseudouridylate synthases
YP_970632.1	PFAM: phosphoesterase, DHHA1; KEGG: rfr:Rfer_1390 phosphoesterase, DHHA1
YP_970633.1	PFAM: protein of unknown function DUF1501; KEGG: rpa:RPA3596 hypothetical protein
YP_970634.1	KEGG: rpa:RPA3597 hypothetical protein
YP_970635.1	PFAM: extracellular solute-binding protein, family 1; KEGG: bmb:BruAb2_0537 sugar ABC transporter, periplasmic sugar-binding protein
YP_970636.1	PFAM: chemotaxis sensory transducer; KEGG: bpm:BURPS1710b_2139 methyl-accepting chemotaxis protein
YP_970637.1	PFAM: protein of unknown function DUF894, DitE; major facilitator superfamily MFS_1; KEGG: psb:Psyr_4288 protein of unknown function DUF894:bacterial protein of unknown function DUF894
YP_970638.1	KEGG: mes:Meso_0025 peptidoglycan-binding domain 1
YP_970639.1	PFAM: pseudouridine synthase; KEGG: sil:SPO2124 RNA pseudouridylate synthase
YP_970640.1	PFAM: peptidase M23B; KEGG: bbr:BB1398 putative peptidase
YP_970642.1	PFAM: phospholipase D/Transphosphatidylase; KEGG: bxe:Bxe_B0786 putative cardiolipin synthetase
YP_970643.1	PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: tbd:Tbd_0651 hypothetical protein
YP_970644.1	KEGG: psb:Psyr_4383 esterase/lipase/thioesterase family protein
YP_970647.1	KEGG: eba:ebB41 hypothetical protein
YP_970649.1	PFAM: regulatory protein, TetR; KEGG: bja:blr4006 transcriptional regulatory protein
YP_970650.1	KEGG: atc:AGR_C_479 hypothetical protein
YP_970651.1	catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_970652.1	KEGG: pol:Bpro_3349 hypothetical protein
YP_970653.1	catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis
YP_970654.1	PFAM: alpha/beta hydrolase fold; KEGG: pol:Bpro_1863 alpha/beta hydrolase fold
YP_970655.1	PFAM: Class I peptide chain release factor; KEGG: pol:Bpro_1858 class I peptide chain release factor
YP_970656.1	PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; KEGG: pol:Bpro_1860 extradiol ring-cleavage dioxygenase, class III enzyme, subunit B
YP_970657.1	PFAM: dienelactone hydrolase; phospholipase/Carboxylesterase; KEGG: pol:Bpro_1861 phospholipase/carboxylesterase
YP_970658.1	KEGG: rfr:Rfer_4003 hypothetical protein
YP_970659.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: dar:Daro_1473 antibiotic biosynthesis monooxygenase
YP_970660.1	PFAM: regulatory protein, AsnC/Lrp family; KEGG: pol:Bpro_3830 transcriptional regulator, AsnC family
YP_970661.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: pae:PA2469 probable transcriptional regulator
YP_970662.1	PFAM: uncharacterized protein UPF0065; KEGG: rme:Rmet_5055 uncharacterized protein UPF0065
YP_970663.1	KEGG: rpd:RPD_2474 gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase
YP_970664.1	PFAM: protein of unknown function DUF980; KEGG: pol:Bpro_2870 protein of unknown function DUF980
YP_970665.1	TIGRFAM: UDP-2,3-diacylglucosamine hydrolase; PFAM: metallophosphoesterase; KEGG: pol:Bpro_2869 metallophosphoesterase
YP_970666.1	PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; KEGG: rfr:Rfer_1345 peptidylprolyl isomerase
YP_970667.1	PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; KEGG: bcn:Bcen_5997 peptidylprolyl isomerase
YP_970668.1	KEGG: rfr:Rfer_1347 ErfK/YbiS/YcfS/YnhG
YP_970669.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rfr:Rfer_1348 tetratricopeptide TPR_2
YP_970670.1	catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA
YP_970671.1	PFAM: HhH-GPD family protein; KEGG: rfr:Rfer_1350 HhH-GPD
YP_970672.1	KEGG: pol:Bpro_2863 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: acetyl-CoA carboxylase, alpha subunit
YP_970673.1	TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; KEGG: rfr:Rfer_1352 tRNA(Ile)-lysidine synthetase-like
YP_970674.1	catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.
YP_970675.1	PFAM: phage integrase family protein; KEGG: lpp:lpp0194 hypothetical protein
YP_970680.1	PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: pfl:PFL_1502 RNA methyltransferase, putative
YP_970685.1	PFAM: helix-turn-helix domain protein; peptidase S24, S26A and S26B; KEGG: net:Neut_1484 putative phage repressor
YP_970686.1	KEGG: eba:ebB253 hypothetical protein
YP_970689.1	KEGG: pfl:PFL_3776 hypothetical protein
YP_970690.1	KEGG: psb:Psyr_2809 hypothetical protein
YP_970701.1	KEGG: sec:SC2611 hypothetical protein
YP_970702.1	KEGG: ret:RHE_CH01093 putative terminase large subunit protein
YP_970704.1	KEGG: nmu:Nmul_A1462 putative phage portal protein
YP_970706.1	KEGG: mag:amb0396 hypothetical protein
YP_970707.1	KEGG: psb:Psyr_2803 hypothetical protein
YP_970709.1	KEGG: par:Psyc_0439 hypothetical protein
YP_970712.1	KEGG: pol:Bpro_1435 hypothetical protein
YP_970714.1	KEGG: bhe:BH14010 expressed protein
YP_970717.1	KEGG: nmu:Nmul_A1450 hypothetical protein
YP_970718.1	KEGG: yps:YPTB1818 hypothetical protein
YP_970720.1	KEGG: mxa:MXAN_1429 response regulator receiver domain/DnaJ domain protein
YP_970721.1	KEGG: bba:Bd2582 cell wall surface anchor family protein
YP_970723.1	KEGG: vvy:VVA0838 hypothetical protein
YP_970724.1	KEGG: psb:Psyr_2772 fibronectin, type III
YP_970725.1	KEGG: rfr:Rfer_4390 hypothetical protein
YP_970726.1	KEGG: noc:Noc_0397 ATPase domain protein
YP_970727.1	KEGG: bpm:BURPS1710b_A0414 GP68
YP_970728.1	KEGG: nmu:Nmul_A1436 hypothetical protein
YP_970729.1	PFAM: phosphoadenosine phosphosulfate reductase; Methyltransferase type 11; Methyltransferase type 12; KEGG: gbe:GbCGDNIH1_0152 SAM-dependent methyltransferase
YP_970730.1	KEGG: ade:Adeh_2705 response regulator receiver
YP_970732.1	KEGG: ecs:ECs1242 hypothetical protein
YP_970739.1	PFAM: replication initiation factor; KEGG: nme:NMB1543 phage replication initiation protein
YP_970742.1	KEGG: bcn:Bcen_1918 hypothetical protein
YP_970744.1	PFAM: Zonular occludens toxin
YP_970745.1	PFAM: Resolvase, N-terminal domain; KEGG: mmr:Mmar10_1503 resolvase
YP_970746.1	PFAM: transposase IS3/IS911 family protein; KEGG: mxa:MXAN_1716 transposase orfA, IS3 family
YP_970747.1	PFAM: Integrase, catalytic region; KEGG: mxa:MXAN_4473 transposase orfB, IS3 family
YP_970748.1	PFAM: Resolvase, N-terminal domain; KEGG: mmr:Mmar10_1503 resolvase
YP_970749.1	PFAM: Integrase, catalytic region; KEGG: mxa:MXAN_4473 transposase orfB, IS3 family
YP_970750.1	PFAM: transposase IS3/IS911 family protein; KEGG: mxa:MXAN_1716 transposase orfA, IS3 family
YP_970751.1	PFAM: Zonular occludens toxin; KEGG: ype:YPO2279 putative phage-related membrane protein
YP_970753.1	KEGG: cal:orf19.1725 hypothetical protein, serine/threonine rich
YP_970756.1	PFAM: replication initiation factor; KEGG: nma:NMA1792 phage replication initiation protein
YP_970758.1	PFAM: HMG-I and HMG-Y, DNA-binding domain protein
YP_970760.1	KEGG: pol:Bpro_1435 hypothetical protein
YP_970761.1	PFAM: CsbD family protein; KEGG: nmu:Nmul_A1602 CsbD-like
YP_970763.1	KEGG: pol:Bpro_1739 hypothetical protein
YP_970764.1	KEGG: eba:ebA6994 hypothetical protein, INTERPRO-suggestion: probable ferritin-like
YP_970765.1	KEGG: eba:ebA6997 hypothetical protein
YP_970766.1	KEGG: reu:Reut_B4915 protein-glutamate methylesterase, two-component system, chemotaxis family, response regulator CheB / chemotaxis protein methyltransferase CheR; TIGRFAM: PAS sensor protein; PFAM: CheB methylesterase; MCP methyltransferase, CheR-type; response regulator receiver; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_970768.1	PFAM: RNA-binding S4 domain protein; KEGG: pol:Bpro_2006 RNA-binding S4
YP_970769.1	KEGG: reu:Reut_B3494 L-sorbosone dehydrogenase
YP_970770.1	KEGG: lpp:lpp1859 hypothetical protein
YP_970771.1	KEGG: stt:t2586 hypothetical protein
YP_970772.1	PFAM: transposase, IS4 family protein; KEGG: bxe:Bxe_C0489 putative transposase IS4
YP_970773.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bte:BTH_II0244 transcriptional regulator, LysR family
YP_970775.1	KEGG: eba:ebA5933 transposition helper protein
YP_970776.1	PFAM: Integrase, catalytic region; KEGG: eba:ebA5932 transposase
YP_970777.1	catalyzes the formation of pyruvate from serine
YP_970778.1	PFAM: uncharacterized protein UPF0065; KEGG: reu:Reut_A1657 hypothetical protein
YP_970779.1	PFAM: Amidase; KEGG: pol:Bpro_3826 amidase
YP_970780.1	PFAM: FAD dependent oxidoreductase; KEGG: pfl:PFL_0805 FAD dependent oxidoreductase
YP_970781.1	KEGG: csa:Csal_2518 hypothetical protein
YP_970782.1	Catalyzes the oxidation of dihydrolipoamide to lipoamide
YP_970783.1	PFAM: protein of unknown function UPF0029; KEGG: dar:Daro_1379 hypothetical protein
YP_970784.1	TIGRFAM: Azurin; PFAM: blue (type 1) copper domain protein; KEGG: bbr:BB3856 azurin
YP_970785.1	PFAM: chemotaxis sensory transducer; KEGG: bte:BTH_I2374 methyl-accepting chemotaxis protein
YP_970786.1	PFAM: Radical SAM domain protein; Radical SAM N-terminal domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: rfr:Rfer_2734 radical SAM
YP_970787.1	KEGG: pol:Bpro_2151 hypothetical protein
YP_970788.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rfr:Rfer_1333 L-carnitine dehydratase/bile acid-inducible protein F
YP_970789.1	catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate
YP_970790.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion
YP_970791.1	TIGRFAM: putative transcriptional regulator, Rrf2 family; iron-sulfur cluster assembly transcription factor IscR; PFAM: protein of unknown function UPF0074; KEGG: pol:Bpro_2177 transcriptional regulator, BadM/Rrf2 family
YP_970792.1	TIGRFAM: cysteine desulfurase IscS; PFAM: aminotransferase, class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: pol:Bpro_2178 cysteine desulfurase IscS
YP_970793.1	TIGRFAM: FeS cluster assembly scaffold IscU; PFAM: nitrogen-fixing NifU domain protein; KEGG: rfr:Rfer_2178 FeS cluster assembly scaffold IscU
YP_970794.1	TIGRFAM: iron-sulfur cluster assembly accessory protein; iron-sulfur cluster assembly protein IscA; PFAM: HesB/YadR/YfhF-family protein; KEGG: rfr:Rfer_2179 iron-sulfur cluster assembly protein IscA
YP_970795.1	TIGRFAM: co-chaperone Hsc20; PFAM: heat shock protein DnaJ domain protein; HSCB oligomerisation domain protein; KEGG: rfr:Rfer_2180 co-chaperone Hsc20
YP_970796.1	involved in the maturation of iron-sulfur cluster-containing proteins
YP_970797.1	TIGRFAM: ferredoxin, 2Fe-2S type, ISC system; PFAM: ferredoxin; KEGG: pol:Bpro_2183 ferredoxin, 2Fe-2S type
YP_970798.1	KEGG: pol:Bpro_2184 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease
YP_970799.1	PFAM: histone deacetylase superfamily; KEGG: pol:Bpro_2707 histone deacetylase superfamily
YP_970800.1	PFAM: FAD dependent oxidoreductase; KEGG: pol:Bpro_2706 FAD dependent oxidoreductase
YP_970801.1	PFAM: protein of unknown function DUF883, ElaB; KEGG: cvi:CV3467 transmembrane protein
YP_970804.1	catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors
YP_970805.1	Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway
YP_970806.1	PFAM: glutaredoxin; KEGG: pol:Bpro_2856 glutaredoxin
YP_970807.1	PFAM: peptidase M3A and M3B, thimet/oligopeptidase F; KEGG: rfr:Rfer_2208 oligopeptidase A
YP_970808.1	catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate
YP_970809.1	PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: pol:Bpro_2674 two component transcriptional regulator, LuxR family
YP_970810.1	KEGG: pol:Bpro_2673 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_970811.1	E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC
YP_970812.1	TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: pol:Bpro_2671 dihydrolipoamide acetyltransferase
YP_970813.1	TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: biotin/lipoyl attachment domain-containing protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: rfr:Rfer_2214 dihydrolipoamide dehydrogenase
YP_970814.1	KEGG: bcn:Bcen_0721 phosphatase-like
YP_970815.1	PFAM: uncharacterized protein UPF0065; KEGG: bbr:BB4952 hypothetical protein
YP_970816.1	KEGG: pfl:PFL_1898 hypothetical protein
YP_970817.1	PFAM: conserved hypothetical protein 95; KEGG: she:Shewmr4_1486 conserved hypothetical protein 95
YP_970818.1	PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; KEGG: rme:Rmet_4835 glycosyl transferase, family 51
YP_970819.1	PFAM: extracellular solute-binding protein, family 3; KEGG: pae:PA3475 cyclohexadienyl dehydratase precursor (prephenate dehydratase / arogenate dehydratase)
YP_970820.1	PFAM: protein kinase; leucine-rich repeat protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; leucine-rich repeat-containing protein, typical subtype; KEGG: pae:PA2502 hypothetical protein
YP_970821.1	PFAM: NUDIX hydrolase; KEGG: pol:Bpro_2117 NUDIX hydrolase
YP_970822.1	PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: rfr:Rfer_2567 fumarylacetoacetate (FAA) hydrolase
YP_970823.1	TIGRFAM: maleylacetoacetate isomerase; PFAM: glutathione S-transferase, N-terminal domain; KEGG: pol:Bpro_2136 maleylacetoacetate isomerase
YP_970824.1	PFAM: protein of unknown function DUF152; KEGG: rfr:Rfer_2564 protein of unknown function DUF152
YP_970825.1	KEGG: pol:Bpro_2138 hypothetical protein
YP_970826.1	TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class I; PFAM: alpha/beta hydrolase fold; Poly-beta-hydroxybutyrate polymerase domain protein; KEGG: rfr:Rfer_2562 poly(R)-hydroxyalkanoic acid synthase, class I
YP_970827.1	KEGG: pol:Bpro_2140 acetyl-CoA C-acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase
YP_970828.1	catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
YP_970829.1	PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_1992 ABC transporter-related protein
YP_970830.1	involved in methylation of ribosomal protein L3
YP_970831.1	dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.
YP_970832.1	TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: pol:Bpro_1995 twitching motility protein
YP_970833.1	catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway
YP_970834.1	catalyzes the formation of succinyldiaminopimelate from N-succinyl-2-amino-6-ketopimelate
YP_970835.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rfr:Rfer_2342 methyl-accepting chemotaxis sensory transducer
YP_970836.1	TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Fe-S cluster domain protein; KEGG: pol:Bpro_2170 electron transport complex, RnfABCDGE type, B subunit
YP_970837.1	TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; KEGG: rfr:Rfer_2340 polyhydroxyalkanoate depolymerase, intracellular
YP_970838.1	PFAM: RelA/SpoT domain protein; KEGG: sth:STH1636 putative GTP pyrophosphokinase
YP_970839.1	TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; CHASE domain protein; PAS fold-4 domain protein; KEGG: bxe:Bxe_A3034 putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) with PAS/PAC and CHASE sensors
YP_970840.1	TIGRFAM: TIM-barrel protein, yjbN family; PFAM: dihydrouridine synthase, DuS; KEGG: pol:Bpro_2153 TIM-barrel protein, YjbN family
YP_970841.1	KEGG: pol:Bpro_5203 transposase IS3/IS911
YP_970842.1	PFAM: transposase, IS4 family protein; KEGG: rso:RSc1704 ISRSO18-transposase protein
YP_970843.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; CHASE3 domain protein; KEGG: rfr:Rfer_0990 methyl-accepting chemotaxis sensory transducer
YP_970844.1	PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: rme:Rmet_2880 two component transcriptional regulator, LuxR family
YP_970846.1	KEGG: xac:XAC2611 hypothetical protein
YP_970848.1	KEGG: xac:XAC4135 hypothetical protein
YP_970849.1	PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: bcn:Bcen_2208 transposase IS116/IS110/IS902
YP_970850.1	KEGG: bte:BTH_I0281 hypothetical protein
YP_970851.1	PFAM: PPE protein; outer membrane efflux protein; KEGG: mfa:Mfla_2553 outer membrane efflux protein
YP_970852.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: reu:Reut_B3969 secretion protein HlyD
YP_970853.1	TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: rme:Rmet_5980 heavy metal efflux pump CzcA
YP_970854.1	KEGG: tcx:Tcr_1931 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_970855.1	KEGG: sdn:Sden_3722 ATP-binding region, ATPase-like protein; TIGRFAM: PAS sensor protein; PFAM: MHYT domain protein; SMART: PAS domain containing protein
YP_970856.1	PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: pol:Bpro_2160 transcriptional regulator, GntR family
YP_970857.1	MDM; functions in conversion of succinate to propionate
YP_970858.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pol:Bpro_2162 GCN5-related N-acetyltransferase
YP_970859.1	functions in transport of arginine/ornithine; inner membrane ATPase that cleaves ATP and phosphorylates two periplasmic proteins that function as two distinct transport systems, the AO (arginine and ornithine) and LAO (lysine, arginine, and ornithine) periplasmic binding proteins
YP_970860.1	PFAM: carboxyl transferase; KEGG: rfr:Rfer_2803 propionyl-CoA carboxylase
YP_970861.1	PFAM: protein of unknown function DUF88; KEGG: ttj:TTHA0189 hypothetical protein
YP_970862.1	TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: pol:Bpro_2167 carbamoyl-phosphate synthase L chain, ATP-binding
YP_970863.1	KEGG: eba:ebA3749 lactoylglutathione lyase
YP_970864.1	KEGG: rfr:Rfer_1038 Asp/Glu racemase
YP_970865.1	KEGG: pol:Bpro_0897 biotin synthase; TIGRFAM: biotin synthase; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB
YP_970866.1	catalyzes the ATP dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA
YP_970867.1	PFAM: Ku domain protein; KEGG: pol:Bpro_3002 hypothetical protein
YP_970869.1	PFAM: Peptidoglycan-binding LysM; KEGG: sdn:Sden_1923 peptidoglycan-binding LysM
YP_970870.1	PFAM: LysR, substrate-binding; KEGG: mlo:mll2784 transcriptional regulator
YP_970871.1	KEGG: xla:398566 similar to PC2 (positive cofactor 2, multiprotein complex) glutamine/Q-rich-associated protein Pfam: Plasmodium_HRP ERM Extensin_2 PROSITE: ALA_RICH GLN_RICH PRO_RICH
YP_970872.1	PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; KEGG: rru:Rru_A2930 periplasmic sensor signal transduction histidine kinase
YP_970873.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rso:RS05454 probable two component response regulator transcription regulator protein
YP_970874.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rso:RSp0313 probable multidrug efflux system protein
YP_970875.1	TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: rso:RSp0312 probable multidrug efflux system transmembrane protein
YP_970876.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bcn:Bcen_4472 RND efflux system, outer membrane lipoprotein, NodT
YP_970877.1	PFAM: transposase, IS4 family protein; KEGG: bxe:Bxe_C0489 putative transposase IS4
YP_970878.1	KEGG: xcb:XC_2995 hypothetical protein
YP_970879.1	PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: bpm:BURPS1710b_2735 low molecular weight protein-tyrosine-phosphatase
YP_970880.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bcn:Bcen_5393 transcriptional regulator, LysR family
YP_970881.1	PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B0185 major facilitator superfamily (MFS_1) transporter
YP_970882.1	KEGG: psp:PSPPH_1371 sensory box histidine kinase/response regulator; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_970883.1	part of the metNIQ transport system for methionine
YP_970884.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_2368 binding-protein-dependent transport systems inner membrane component
YP_970885.1	PFAM: chemotaxis sensory transducer; KEGG: bte:BTH_I2374 methyl-accepting chemotaxis protein
YP_970886.1	TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: rfr:Rfer_1770 lipoprotein YaeC
YP_970887.1	PFAM: NADPH-dependent FMN reductase; KEGG: rfr:Rfer_2368 NADPH-dependent FMN reductase
YP_970888.1	PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: pol:Bpro_2372 (acyl-carrier protein) phosphodiesterase
YP_970889.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: pol:Bpro_2373 transcriptional regulator, LysR family
YP_970890.1	KEGG: bms:BR1459 hypothetical protein
YP_970891.1	PFAM: protein of unknown function DUF1234; KEGG: pol:Bpro_2375 protein of unknown function DUF1234
YP_970892.1	TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: pol:Bpro_2376 thiosulphate-binding protein
YP_970893.1	TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysT; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_2377 sulfate ABC transporter, permease protein CysT
YP_970894.1	TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_2378 sulfate ABC transporter, permease protein CysW
YP_970895.1	KEGG: pol:Bpro_2379 sulphate transport system permease protein 1; TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter-related protein; SMART: AAA ATPase
YP_970896.1	PFAM: Disulphide bond formation protein DsbB; KEGG: pol:Bpro_2385 disulphide bond formation protein DsbB
YP_970897.1	PFAM: Rhodanese domain protein; glutaredoxin; glutathione S-transferase, N-terminal domain; KEGG: pol:Bpro_2937 rhodanese-like
YP_970898.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: sal:Sala_1903 transcriptional regulator, LysR family
YP_970899.1	PFAM: beta-lactamase; KEGG: rpa:RPA0362 putative class A beta-lactamase precursor (penicillinase)
YP_970900.1	catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis
YP_970901.1	PFAM: FAD dependent oxidoreductase; KEGG: bja:bll6812 putative dehydrogenase
YP_970903.1	KEGG: pol:Bpro_2399 ATP-dependent helicase HrpA; TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase domain protein; helicase-associated domain protein; protein of unknown function DUF1605; SMART: AAA ATPase; DEAD-like helicases-like
YP_970905.1	Represses a number of genes involved in the response to DNA damage
YP_970906.1	PFAM: Asparaginase/glutaminase; KEGG: pol:Bpro_2953 asparaginase
YP_970907.1	PFAM: Integrase, catalytic region; KEGG: bpa:BPP2353 IS1002 transposase
YP_970908.1	essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP
YP_970909.1	KEGG: pol:Bpro_2951 3-deoxy-D-manno-octulosonate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase
YP_970910.1	PFAM: protein of unknown function DUF343; KEGG: pol:Bpro_2950 protein of unknown function DUF343
YP_970911.1	transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate
YP_970912.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: pol:Bpro_2948 biopolymer transport protein ExbD/TolR
YP_970913.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: rfr:Rfer_3153 MotA/TolQ/ExbB proton channel
YP_970914.1	KEGG: pol:Bpro_2946 exodeoxyribonuclease VII, large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII, large subunit; nucleic acid binding, OB-fold, tRNA/helicase-type
YP_970915.1	PFAM: manganese and iron superoxide dismutase; KEGG: pol:Bpro_2945 superoxide dismutase
YP_970916.1	PFAM: protein of unknown function DUF192; KEGG: rfr:Rfer_2763 protein of unknown function DUF192
YP_970917.1	KEGG: rme:Rmet_2897 hypothetical protein
YP_970918.1	Converts isocitrate to alpha ketoglutarate
YP_970919.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: pol:Bpro_3413 transcriptional regulator, LysR family
YP_970920.1	PFAM: glutathione S-transferase, N-terminal domain; glutathione S-transferase, C-terminal domain; KEGG: rfr:Rfer_0047 glutathione S-transferase-like
YP_970921.1	TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; PFAM: 4-oxalocrotonate tautomerase; KEGG: gsu:GSU1550 4-oxalocrotonate tautomerase family protein
YP_970922.1	KEGG: sil:SPO1192 hypothetical protein
YP_970923.1	KEGG: jan:Jann_3318 glyoxalase/bleomycin resistance protein/dioxygenase
YP_970924.1	PFAM: major facilitator superfamily MFS_1; KEGG: rru:Rru_A0381 major facilitator superfamily transporter MFS_1
YP_970925.1	PFAM: regulatory protein, MerR; KEGG: mxa:MXAN_6983 transcriptional regulator, MerR family
YP_970926.1	PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: bcn:Bcen_2858 histone-like nucleoid-structuring protein H-NS
YP_970927.1	KEGG: pol:Bpro_1655 hypothetical protein
YP_970928.1	KEGG: ppu:PP_2684 hypothetical protein
YP_970929.1	PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: xoo:XOO3004 serine protease
YP_970930.1	KEGG: xcv:XCV1717 hypothetical protein
YP_970931.1	PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: xcc:XCC1665 RNA polymerase sigma-E factor
YP_970932.1	KEGG: xcv:XCV1719 hypothetical protein
YP_970933.1	catalyzes the formation of 2,5-dioxopentanoate from 5-dehydro-4-deoxy-D-glucarate
YP_970934.1	PFAM: uncharacterized protein UPF0065; KEGG: pol:Bpro_3101 uncharacterized protein UPF0065
YP_970935.1	PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: psp:PSPPH_4253 transcriptional regulator, GntR family
YP_970936.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility C-terminal domain; KEGG: pfo:Pfl_3452 NAD-dependent epimerase/dehydratase
YP_970937.1	PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: pst:PSPTO_1052 senescence marker protein-30 family protein
YP_970938.1	TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: pol:Bpro_3107 TRAP dicarboxylate transporter, DctP subunit
YP_970939.1	PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: pol:Bpro_3106 tripartite ATP-independent periplasmic transporter, DctQ component
YP_970940.1	TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: bja:bll6056 dicarboxylate transporter membrane protein
YP_970941.1	PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain; KEGG: pol:Bpro_3104 galactarate dehydratase
YP_970942.1	PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: rso:RS05371 putative gluconolactonase precursor (D-glucono-delta-lactone lactonohydrolase) protein
YP_970943.1	PFAM: uncharacterized protein UPF0065; KEGG: rme:Rmet_1635 uncharacterized protein UPF0065
YP_970944.1	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: reu:Reut_B4866 TonB-dependent receptor
YP_970945.1	PFAM: superoxide dismutase, copper/zinc binding; KEGG: dra:DR1546 superoxide dismutase (sodC), Cu-Zn family
YP_970946.1	KEGG: pol:Bpro_2471 3-hydroxyisobutyrate dehydrogenase; TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding
YP_970947.1	KEGG: mlo:mlr7906 hypothetical protein
YP_970948.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: bbr:BB2630 probable acyl-CoA dehydrogenase
YP_970950.1	TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: xcb:XC_2981 methylmalonate-semialdehyde dehydrogenase
YP_970951.1	PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: bcn:Bcen_2208 transposase IS116/IS110/IS902
YP_970952.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: aci:ACIAD1602 putative transcriptional regulator (LysR family)
YP_970953.1	KEGG: rha:RHA1_ro04441 hypothetical protein
YP_970954.1	involved in the transport across the cytoplasmic membrane of D-alanine, D-serine and glycine
YP_970956.1	TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; Carbamoyl-phosphate synthase, small chain; KEGG: pol:Bpro_2679 carbamoyl-phosphate synthase, small subunit
YP_970957.1	TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain, oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; MGS domain protein; KEGG: pol:Bpro_2678 carbamoyl-phosphate synthase, large subunit
YP_970958.1	TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: pol:Bpro_2677 GreA/GreB family elongation factor
YP_970959.1	KEGG: rfr:Rfer_2008 hypothetical protein
YP_970960.1	KEGG: par:Psyc_1205 hypothetical protein
YP_970961.1	PFAM: protein of unknown function UPF0044; KEGG: rfr:Rfer_2009 protein of unknown function UPF0044
YP_970962.1	PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: pol:Bpro_2853 ribosomal RNA methyltransferase RrmJ/FtsJ
YP_970963.1	KEGG: pol:Bpro_2852 ATP-dependent metalloprotease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase, central domain protein; peptidase M41, FtsH extracellular; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase
YP_970964.1	KEGG: rfr:Rfer_2012 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase, DHPS
YP_970965.1	catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
YP_970966.1	KEGG: rfr:Rfer_3192 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_970967.1	KEGG: rfr:Rfer_2028 hypothetical protein
YP_970968.1	catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate
YP_970969.1	PFAM: Phosphoglycerate mutase; KEGG: rfr:Rfer_2018 phosphohistidine phosphatase, SixA
YP_970970.1	KEGG: pol:Bpro_2248 hypothetical protein
YP_970971.1	PFAM: Ppx/GppA phosphatase; KEGG: pol:Bpro_2249 Ppx/GppA phosphatase
YP_970972.1	TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: pol:Bpro_2252 periplasmic phosphate binding protein
YP_970973.1	TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_2253 phosphate ABC transporter, permease protein PstC
YP_970974.1	Part of the ABC transporter complex PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions
YP_970975.1	KEGG: pol:Bpro_2255 phosphate transport system permease protein 1; TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter-related protein; SMART: AAA ATPase
YP_970976.1	TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: pol:Bpro_2256 phosphate uptake regulator, PhoU
YP_970977.1	TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pol:Bpro_2257 two component transcriptional regulator, winged helix family
YP_970978.1	PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: rfr:Rfer_0577 multi-sensor signal transduction histidine kinase
YP_970979.1	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: pol:Bpro_2259 MATE efflux family protein
YP_970980.1	KEGG: rfr:Rfer_2901 putative inner membrane transmembrane protein
YP_970981.1	PFAM: ribosomal protein L31; KEGG: pol:Bpro_2261 ribosomal protein L31
YP_970982.1	with SbcC cleaves DNA hairpin structure, also has 5' single-strand endonuclease activity
YP_970983.1	PFAM: SMC domain protein; KEGG: dar:Daro_1919 SMC protein, N-terminal
YP_970984.1	An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes
YP_970985.1	TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: rfr:Rfer_2898 thioredoxin
YP_970986.1	KEGG: rfr:Rfer_2897 hypothetical protein
YP_970987.1	PFAM: UvrD/REP helicase; KEGG: pol:Bpro_2265 UvrD/REP helicase
YP_970988.1	PFAM: HI0933 family protein; FAD dependent oxidoreductase; KEGG: pol:Bpro_2266 HI0933-like protein
YP_970989.1	PFAM: chemotaxis sensory transducer; Cache, type 2 domain protein; KEGG: gme:Gmet_1078 methyl-accepting chemotaxis sensory transducer
YP_970990.1	KEGG: rfr:Rfer_1457 DNA polymerase III, subunits gamma and tau; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase
YP_970991.1	PFAM: conserved hypothetical protein 103; KEGG: rfr:Rfer_1458 conserved hypothetical protein 103
YP_970992.1	involved in a recombinational process of DNA repair, independent of the recBC complex
YP_970993.1	KEGG: pol:Bpro_2271 membrane protein-like
YP_970994.1	KEGG: pol:Bpro_2272 putative signal peptide protein
YP_970995.1	KEGG: bxe:Bxe_A3305 hypothetical protein
YP_970996.1	PFAM: Lytic transglycosylase, catalytic; MLTD_N domain protein; KEGG: pol:Bpro_2278 lytic transglycosylase, catalytic
YP_970997.1	PFAM: beta-lactamase domain protein; KEGG: rfr:Rfer_1462 hydroxyacylglutathione hydrolase
YP_970998.1	PFAM: Methyltransferase type 11; KEGG: pol:Bpro_2280 hypothetical protein
YP_970999.1	An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids
YP_971000.1	PFAM: Integrase, catalytic region; KEGG: bpa:BPP2353 IS1002 transposase
YP_971001.1	PFAM: Thioredoxin domain; KEGG: reu:Reut_B4067 probable thioredoxin
YP_971002.1	TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; MoeA domain protein, domain I and II; MoeA domain protein, domain IV; KEGG: rfr:Rfer_1466 MoeA-like, domain I and II
YP_971003.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pol:Bpro_4699 GCN5-related N-acetyltransferase
YP_971004.1	TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: rfr:Rfer_1467 molybdopterin-guanine dinucleotide biosynthesis protein A
YP_971005.1	together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z
YP_971006.1	Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
YP_971008.1	PFAM: manganese and iron superoxide dismutase; KEGG: pae:PA4468 superoxide dismutase
YP_971009.1	PFAM: zinc/iron permease; KEGG: bpe:BP0194 probable metal transporter
YP_971010.1	PFAM: aldehyde dehydrogenase; KEGG: pol:Bpro_2290 aldehyde dehydrogenase (NAD+)
YP_971011.1	PFAM: cyclic nucleotide-binding; SMART: regulatory protein, Crp; KEGG: pae:PA0275 probable transcriptional regulator
YP_971012.1	PFAM: protein of unknown function DUF962; KEGG: pfl:PFL_0196 hypothetical protein
YP_971013.1	PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: rme:Rmet_3696 peptidase M20
YP_971014.1	pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient
YP_971015.1	PFAM: Inorganic pyrophosphatase; KEGG: rfr:Rfer_1473 inorganic diphosphatase
YP_971016.1	KEGG: rfr:Rfer_1225 hypothetical protein
YP_971017.1	KEGG: rfr:Rfer_1226 hypothetical protein
YP_971018.1	KEGG: pol:Bpro_2388 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP C-terminal domain protein; nucleic acid binding, OB-fold, tRNA/helicase-type; SMART: phosphoesterase PHP domain protein
YP_971019.1	PFAM: AsmA family protein; KEGG: bbr:BB4152 exported protein, conserved
YP_971020.1	PFAM: pseudouridine synthase; KEGG: pol:Bpro_2906 pseudouridine synthase
YP_971021.1	PFAM: coagulation factor 5/8 type domain protein; Fibronectin, type III domain protein; KEGG: rso:RS01652 putative transmembrane protein
YP_971022.1	PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: eba:ebA381 probable chromosome partitioning related protein
YP_971023.1	KEGG: eba:ebA377 hypothetical protein
YP_971024.1	KEGG: eba:ebA374 hypothetical protein
YP_971028.1	KEGG: eba:ebA371 hypothetical protein
YP_971029.1	KEGG: eba:ebA370 hypothetical protein
YP_971030.1	binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA
YP_971031.1	KEGG: mbo:Mb1797 PE-PGRS family protein
YP_971032.1	PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicases-like; KEGG: xcv:XCVd0141 DNA helicase
YP_971035.1	KEGG: pfo:Pfl_3003 hypothetical protein
YP_971037.1	KEGG: eba:ebA2436 hypothetical protein
YP_971039.1	KEGG: stt:t4236 hypothetical protein
YP_971041.1	KEGG: bxe:Bxe_A2408 hypothetical protein
YP_971044.1	KEGG: bxe:Bxe_A1204 hypothetical protein
YP_971045.1	PFAM: helicase domain protein; SMART: DEAD-like helicases-like; KEGG: pfl:PFL_4690 hypothetical protein
YP_971046.1	PFAM: Resolvase, N-terminal domain; KEGG: xac:XACb0071 Tn5045 resolvase
YP_971047.1	KEGG: xac:XACb0070 hypothetical protein
YP_971048.1	PFAM: PilT protein domain protein; SMART: Nucleotide binding protein, PINc; KEGG: xac:XACb0069 hypothetical protein
YP_971049.1	PFAM: transposase Tn3 family protein; KEGG: xcv:XCVb0015 Tn5045 transposase
YP_971050.1	TIGRFAM: yecA family protein; PFAM: SEC-C motif domain protein; KEGG: xcv:XCVc0036 hypothetical protein
YP_971051.1	PFAM: transposase, IS4 family protein; KEGG: bxe:Bxe_C0489 putative transposase IS4
YP_971052.1	PFAM: peptidase C55; KEGG: xcv:XCV2156 Xanthomonas outer protein J
YP_971053.1	PFAM: Integrase, catalytic region; KEGG: psp:PSPPH_A0089 ISPsy21, transposase orfB
YP_971055.1	KEGG: reu:Reut_D6443 hypothetical protein
YP_971056.1	KEGG: pol:Bpro_5076 hypothetical protein
YP_971057.1	KEGG: bcn:Bcen_4341 hypothetical protein
YP_971058.1	PFAM: type II secretion system protein E; KEGG: ttj:TTHA1774 pili retraction protein PilT
YP_971061.1	PFAM: type II secretion system protein E; KEGG: pol:Bpro_5246 type II secretion system protein E
YP_971063.1	PFAM: type II secretion system protein; KEGG: vch:VC0836 toxin co-regulated pilus biosynthesis protein E
YP_971064.1	PFAM: type II secretion system protein E; KEGG: bte:BTH_II0772 type II/IV secretion system protein
YP_971067.1	KEGG: bpm:BURPS1710b_A0657 hypothetical protein
YP_971068.1	KEGG: gox:GOX2624 PilL
YP_971069.1	PFAM: Lytic transglycosylase, catalytic; KEGG: mta:Moth_1608 lytic transglycosylase, catalytic
YP_971070.1	KEGG: mlo:mlr9242 hypothetical protein
YP_971072.1	KEGG: eba:ebA426 disulfide bond isomerase
YP_971073.1	PFAM: phage integrase family protein; KEGG: pol:Bpro_3191 tyrosine recombinase XerD
YP_971074.1	KEGG: rfr:Rfer_1227 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP C-terminal domain protein; nucleic acid binding, OB-fold, tRNA/helicase-type; SMART: phosphoesterase PHP domain protein
YP_971075.1	KEGG: rfr:Rfer_1226 hypothetical protein
YP_971076.1	KEGG: rfr:Rfer_1225 hypothetical protein
YP_971077.1	PFAM: Rhs element Vgr protein; KEGG: bps:BPSS2093 hypothetical protein
YP_971080.1	KEGG: gsu:GSU3186 hypothetical protein
YP_971081.1	KEGG: mxa:MXAN_1306 hypothetical protein
YP_971082.1	TIGRFAM: YD repeat protein; PFAM: YD repeat-containing protein; KEGG: bxe:Bxe_A4426 rhs family protein
YP_971084.1	KEGG: atc:AGR_L_2371 hypothetical protein
YP_971085.1	KEGG: pol:Bpro_4984 hypothetical protein
YP_971088.1	KEGG: yps:YPTB1690 hypothetical protein
YP_971089.1	KEGG: sde:Sde_1969 zinc metalloproteinase Mpr protein
YP_971090.1	PFAM: GCN5-related N-acetyltransferase; KEGG: eba:p1B136 putative histone acetyltransferase-related protein
YP_971091.1	KEGG: eba:p1B137 conserved hypothetical protein, with unknown function
YP_971092.1	KEGG: eba:ebA421 hypothetical protein
YP_971094.1	KEGG: eba:ebA419 hypothetical protein
YP_971095.1	PFAM: protein of unknown function DUF1527; KEGG: eba:ebA430 hypothetical protein
YP_971096.1	KEGG: noc:Noc_0650 protein of unknown function DUF1525
YP_971097.1	KEGG: eba:ebA416 hypothetical protein
YP_971098.1	KEGG: eba:ebA415 hypothetical protein
YP_971099.1	KEGG: eba:ebA412 hypothetical protein
YP_971100.1	KEGG: eba:ebA410 hypothetical protein
YP_971101.1	KEGG: eba:ebA409 hypothetical protein
YP_971102.1	KEGG: noc:Noc_0643 hypothetical protein
YP_971103.1	KEGG: stt:t4264 hypothetical protein
YP_971104.1	KEGG: noc:Noc_0640 hypothetical protein
YP_971105.1	KEGG: eba:ebA405 hypothetical protein
YP_971106.1	KEGG: eba:ebA403 hypothetical protein
YP_971107.1	KEGG: noc:Noc_0631 hypothetical protein
YP_971108.1	KEGG: eba:ebA398 hypothetical protein
YP_971109.1	KEGG: lma:LmjF35.0290 hypothetical protein, conserved
YP_971110.1	KEGG: stt:t4239 putative type IV pilus protein
YP_971112.1	KEGG: xfa:XF2112 hypothetical protein
YP_971114.1	PFAM: Relaxase; SMART: metal-dependent phosphohydrolase, HD region; KEGG: eba:ebA387 hypothetical protein
YP_971115.1	PFAM: Integrase, catalytic region; KEGG: eba:ebA5932 transposase
YP_971116.1	KEGG: eba:ebA5933 transposition helper protein
YP_971117.1	KEGG: xcv:XCV2269 hypothetical protein
YP_971119.1	KEGG: xac:XAC2238 plasmid-related protein
YP_971120.1	KEGG: rpc:RPC_4333 metal dependent phosphohydrolase
YP_971121.1	catalyzes the formation of tetrahydropteroyl-L-glutamate and methionine from L-homocysteine and 5-methyltetrahydropteroyltri-L-glutamate
YP_971122.1	KEGG: rme:Rmet_5074 hypothetical protein
YP_971123.1	PFAM: NADPH-dependent FMN reductase; KEGG: rme:Rmet_5075 NADPH-dependent FMN reductase
YP_971124.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: xcb:XC_0327 transcriptional regulator MetE/MetH family
YP_971125.1	PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: rpa:RPA0573 putative ABC transporter (ATP-binding protein)
YP_971126.1	KEGG: pae:PA2831 hypothetical protein
YP_971128.1	PFAM: Methyltransferase type 11; Methyltransferase type 12
YP_971129.1	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: bca:BCE_A0166 radical SAM domain protein
YP_971130.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ppu:PP_2507 oxidoreductase, short-chain dehydrogenase/reductase family
YP_971131.1	PFAM: ABC-2 type transporter; KEGG: mfa:Mfla_2239 ABC-2
YP_971132.1	PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: pol:Bpro_3536 short-chain dehydrogenase/reductase SDR
YP_971133.1	KEGG: pol:Bpro_3549 glyoxalase I; TIGRFAM: lactoylglutathione lyase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase
YP_971134.1	KEGG: rfr:Rfer_2061 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase
YP_971135.1	catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate
YP_971136.1	TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: gka:GK1971 C4-dicarboxylate transport system (C4-dicarboxylate-binding protein)
YP_971137.1	TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: gka:GK1972 transporter
YP_971138.1	PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: pmu:PM1254 hypothetical HI1030
YP_971139.1	TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase; KEGG: ppu:PP_3416 gluconokinase
YP_971140.1	PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: rfr:Rfer_0957 transcriptional regulator, LacI family
YP_971141.1	KEGG: pfl:PFL_0497 hypothetical protein
YP_971142.1	PFAM: OmpA/MotB domain protein; KEGG: pol:Bpro_3552 OmpA/MotB
YP_971143.1	PFAM: ChaC family protein; KEGG: pol:Bpro_3553 ChaC-like protein
YP_971144.1	KEGG: pst:PSPTO_0876 type III effector HopD1
YP_971145.1	KEGG: pol:Bpro_3559 pyridoxamine 5'-phosphate oxidase; TIGRFAM: pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding
YP_971146.1	PFAM: Auxin Efflux Carrier; KEGG: pol:Bpro_1684 auxin efflux carrier
YP_971147.1	PFAM: aldehyde dehydrogenase; KEGG: bcn:Bcen_6436 aldehyde dehydrogenase
YP_971148.1	PFAM: FAD dependent oxidoreductase; KEGG: bcn:Bcen_6437 FAD dependent oxidoreductase
YP_971149.1	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: pol:Bpro_1683 TonB-dependent receptor
YP_971151.1	KEGG: pol:Bpro_1681 hypothetical protein
YP_971152.1	KEGG: pol:Bpro_1680 hypothetical protein
YP_971153.1	PFAM: protein of unknown function DUF214; KEGG: pol:Bpro_1679 protein of unknown function DUF214
YP_971154.1	PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_1678 ABC transporter-related protein
YP_971155.1	PFAM: transcriptional regulator PadR family protein; KEGG: rfr:Rfer_2054 putative ferric uptake regulator, FUR family
YP_971156.1	KEGG: pol:Bpro_1674 peptide methionine sulfoxide reductase; TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A
YP_971157.1	PFAM: regulatory protein, TetR; KEGG: pol:Bpro_1669 transcriptional regulator, TetR family
YP_971158.1	PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; O-methyltransferase, family 3; methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; KEGG: pol:Bpro_1666 protein-L-isoaspartate(D-aspartate) O-methyltransferase
YP_971159.1	SMART: Rhodanese domain protein; KEGG: rfr:Rfer_2603 rhodanese-like
YP_971160.1	TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: pol:Bpro_1664 type I secretion outer membrane protein, TolC
YP_971161.1	PFAM: GCN5-related N-acetyltransferase; KEGG: rfr:Rfer_2352 GCN5-related N-acetyltransferase
YP_971162.1	PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain protein; KEGG: rfr:Rfer_2997 three-deoxy-D-manno-octulosonic-acid transferase-like
YP_971163.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: rso:RSc0704 hypothetical protein
YP_971164.1	PFAM: phosphoglucomutase/phosphomannomutase C terminal; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: rfr:Rfer_2999 phosphomannomutase
YP_971165.1	PFAM: helix-turn-helix- domain containing protein, AraC type; HhH-GPD family protein; Ada, metal-binding domain protein; AlkA domain protein; KEGG: pol:Bpro_1638 transcriptional regulator, AraC family
YP_971166.1	TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase; KEGG: pol:Bpro_1637 methylated-DNA--protein-cysteine methyltransferase
YP_971167.1	PFAM: protein of unknown function DUF6, transmembrane; KEGG: rfr:Rfer_3002 protein of unknown function DUF6, transmembrane
YP_971168.1	TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: dar:Daro_3990 PAS:GGDEF
YP_971169.1	catalyzes the formation of propionyl-CoA using propionate as a substrate; PrpE from Ralstonia solanacearum can produce acetyl-, propionyl-, butyryl- and acrylyl-coenzyme A, and Salmonella enterica produces propionyl- and butyryl-coenzyme A; not expressed in Escherichia coli when grown on propionate/minimal media; ATP-dependent
YP_971170.1	PFAM: isochorismatase hydrolase; KEGG: rfr:Rfer_2323 isochorismatase hydrolase
YP_971171.1	PFAM: glucose sorbosone dehydrogenase; KEGG: pol:Bpro_2666 glucose sorbosone dehydrogenase
YP_971172.1	PFAM: NLP/P60 protein; KEGG: pol:Bpro_2667 peptidace C40 NLP/P60
YP_971173.1	KEGG: reu:Reut_B5231 transglycosylase-associated protein
YP_971174.1	KEGG: pol:Bpro_1991 hypothetical protein
YP_971175.1	PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicases-like; KEGG: bxe:Bxe_B1664 putative helicase
YP_971176.1	PFAM: protein of unknown function DUF55; KEGG: bps:BPSL0973 hypothetical protein
YP_971177.1	KEGG: bbr:BB3068 hypothetical protein
YP_971178.1	SMART: extracellular solute-binding protein, family 3; KEGG: bur:Bcep18194_C7267 ABC amino acid transporter, periplasmic ligand binding protein
YP_971180.1	TIGRFAM: YD repeat protein; PFAM: YD repeat-containing protein; PAAR repeat-containing protein; KEGG: bur:Bcep18194_B0648 rhs family protein
YP_971181.1	KEGG: bur:Bcep18194_B0647 hypothetical protein
YP_971182.1	PFAM: Rhs element Vgr protein; KEGG: bps:BPSS2093 hypothetical protein
YP_971183.1	KEGG: rfr:Rfer_2201 DNA ligase, NAD-dependent; TIGRFAM: DNA ligase, NAD-dependent; PFAM: helix-hairpin-helix motif; BRCT domain protein; zinc-finger, NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase, OB-fold; NAD-dependent DNA ligase, adenylation; SMART: Helix-hairpin-helix DNA-binding, class 1; NAD-dependent DNA ligase-like
YP_971184.1	SMART: ZipA, C-terminal FtsZ-binding region; KEGG: rfr:Rfer_2200 hypothetical protein
YP_971185.1	TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein; KEGG: rfr:Rfer_2199 chromosome segregation protein SMC
YP_971186.1	PFAM: lipase, class 3; KEGG: xac:XAC2990 hypothetical protein
YP_971187.1	PFAM: protein of unknown function UPF0060; KEGG: bxe:Bxe_B1996 hypothetical protein
YP_971188.1	TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: rfr:Rfer_3250 diguanylate cyclase/phosphodiesterase with PAS/PAC and CHASE sensor(s)
YP_971189.1	PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: rme:Rmet_3991 arsenical pump membrane protein
YP_971190.1	PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: bcn:Bcen_5775 ABC transporter-related protein
YP_971191.1	KEGG: xcv:XCV4246 putative acetyltransferase
YP_971192.1	KEGG: dra:DR0458 hypothetical protein
YP_971193.1	KEGG: pol:Bpro_2400 hypothetical protein
YP_971194.1	PFAM: regulatory protein, MerR; KEGG: mfa:Mfla_1996 transcriptional regulator, MerR family
YP_971195.1	This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control
YP_971196.1	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily
YP_971197.1	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily
YP_971198.1	binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit
YP_971199.1	PFAM: ribosomal protein L35; KEGG: pol:Bpro_2104 ribosomal protein L35
YP_971200.1	TIGRFAM: translation initiation factor IF-3; PFAM: initiation factor 3; KEGG: rfr:Rfer_1337 translation initiation factor IF-3
YP_971201.1	catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr)
YP_971202.1	TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; KEGG: dar:Daro_3098 isocitrate lyase
YP_971203.1	KEGG: pol:Bpro_2100 hypothetical protein
YP_971204.1	PFAM: protein of unknown function DUF6, transmembrane; Protein of unknown function DUF250; KEGG: pol:Bpro_2099 protein of unknown function DUF6, transmembrane
YP_971205.1	PFAM: regulatory protein, AsnC/Lrp family; KEGG: pol:Bpro_2809 transcriptional regulator, AsnC family
YP_971206.1	PFAM: protein of unknown function DUF6, transmembrane; KEGG: pol:Bpro_2810 protein of unknown function DUF6, transmembrane
YP_971207.1	PFAM: SWIB/MDM2 domain protein; KEGG: pol:Bpro_2811 SWIB complex, BAF60b
YP_971208.1	PFAM: extracellular solute-binding protein, family 1; KEGG: bxe:Bxe_C1181 ABC Fe+3 siderophore transporter, periplasmic ligand binding protein
YP_971209.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: rfr:Rfer_2204 short-chain dehydrogenase/reductase SDR
YP_971210.1	probable dehydrogenase
YP_971211.1	KEGG: rfr:Rfer_2490 putative glutathione S-transferase-related protein
YP_971212.1	PFAM: GCN5-related N-acetyltransferase; KEGG: hch:HCH_01582 predicted acyltransferase
YP_971213.1	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; KEGG: rfr:Rfer_2491 alcohol dehydrogenase, zinc-binding
YP_971214.1	TIGRFAM: uncharacterized domain 1; PFAM: thioesterase superfamily protein; KEGG: pol:Bpro_2566 phenylacetic acid degradation-related protein
YP_971215.1	Involved in the nonphosphorylative, ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate
YP_971216.1	KEGG: eba:ebA5933 transposition helper protein
YP_971217.1	PFAM: Integrase, catalytic region; KEGG: eba:ebA5932 transposase
YP_971218.1	KEGG: rso:RSc3290 hypothetical protein
YP_971219.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rfr:Rfer_2384 acyl-CoA dehydrogenase-like
YP_971220.1	TIGRFAM: uncharacterized domain 1; PFAM: thioesterase superfamily protein; KEGG: bte:BTH_II2185 uncharacterized domain 1 protein
YP_971221.1	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation
YP_971222.1	PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: pol:Bpro_2573 3-hydroxyacyl-CoA dehydrogenase, NAD-binding
YP_971225.1	KEGG: mca:MCA2677 hypothetical protein
YP_971226.1	KEGG: mca:MCA2676 hypothetical protein
YP_971228.1	KEGG: mca:MCA2674 hypothetical protein
YP_971229.1	KEGG: eba:ebA7239 hypothetical protein
YP_971230.1	KEGG: mca:MCA2672 hypothetical protein
YP_971231.1	KEGG: rso:RSc0874 probable transmembrane protein
YP_971232.1	TIGRFAM: phage tape measure protein; KEGG: eba:ebA7243 phage-related minor tail protein
YP_971233.1	KEGG: xfa:XF0518 hypothetical protein
YP_971234.1	KEGG: mfa:Mfla_2693 hypothetical protein
YP_971235.1	KEGG: vvu:VV10102 hypothetical protein
YP_971236.1	KEGG: mfa:Mfla_2695 hypothetical protein
YP_971237.1	KEGG: mfa:Mfla_2696 hypothetical protein
YP_971239.1	KEGG: mfa:Mfla_2698 hypothetical protein
YP_971240.1	PFAM: D12 class N6 adenine-specific DNA methyltransferase; KEGG: bte:BTH_II1068 DNA adenine methylase
YP_971241.1	KEGG: mfa:Mfla_2700 hypothetical protein
YP_971242.1	TIGRFAM: phage uncharacterized protein; KEGG: nma:NMA1852 hypothetical protein
YP_971243.1	KEGG: dvu:DVU2704 hypothetical protein
YP_971245.1	KEGG: son:SO2973 prophage LambdaSo, lysozyme, putative
YP_971247.1	KEGG: plu:plu3453 hypothetical protein
YP_971249.1	PFAM: Integrase, catalytic region; KEGG: nma:NMA1284 phage transposase
YP_971250.1	KEGG: dvu:DVU2689 bacteriophage DNA transposition B protein
YP_971252.1	KEGG: mca:MCA2952 hypothetical protein
YP_971254.1	KEGG: pol:Bpro_0996 hypothetical protein
YP_971256.1	KEGG: nma:NMA1871 hypothetical protein
YP_971257.1	KEGG: pol:Bpro_3764 hypothetical protein
YP_971262.1	KEGG: pol:Bpro_3767 hypothetical protein
YP_971263.1	PFAM: protein of unknown function DUF1018; KEGG: sgl:SG0817 hypothetical protein
YP_971264.1	KEGG: bte:BTH_II1012 GP38
YP_971265.1	KEGG: dvu:DVU2696 hypothetical protein
YP_971266.1	PFAM: glycoside hydrolase, family 5; KEGG: xcv:XCV0358 putative cellulase
YP_971267.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: sde:Sde_1361 putative diguanylate phosphodiesterase (EAL domain)
YP_971268.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rme:Rmet_2262 diguanylate cyclase (GGDEF domain)
YP_971269.1	KEGG: rme:Rmet_2261 putative lipoprotein
YP_971270.1	KEGG: rme:Rmet_2260 hypothetical protein
YP_971271.1	PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: rme:Rmet_2259 serine phosphatase
YP_971272.1	PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_2574 ABC transporter-related protein
YP_971273.1	PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_2575 ABC transporter-related protein
YP_971274.1	PFAM: inner-membrane translocator; KEGG: pol:Bpro_2576 inner-membrane translocator
YP_971275.1	PFAM: inner-membrane translocator; KEGG: rfr:Rfer_2390 inner-membrane translocator
YP_971276.1	KEGG: rfr:Rfer_2391 extracellular ligand-binding receptor
YP_971277.1	PFAM: transposase IS3/IS911 family protein; KEGG: psp:PSPPH_A0090 ISPsy21, transposase orfA
YP_971278.1	PFAM: Integrase, catalytic region; KEGG: psp:PSPPH_A0089 ISPsy21, transposase orfB
YP_971279.1	PFAM: peptidase C55; KEGG: xcv:XCV2156 Xanthomonas outer protein J
YP_971280.1	PFAM: transposase, IS4 family protein; KEGG: bxe:Bxe_C0489 putative transposase IS4
YP_971281.1	TIGRFAM: yecA family protein; PFAM: SEC-C motif domain protein; KEGG: xcv:XCVc0036 hypothetical protein
YP_971282.1	PFAM: transposase Tn3 family protein; KEGG: xcv:XCVb0015 Tn5045 transposase
YP_971283.1	PFAM: PilT protein domain protein; SMART: Nucleotide binding protein, PINc; KEGG: xac:XACb0069 hypothetical protein
YP_971284.1	KEGG: xac:XACb0070 hypothetical protein
YP_971285.1	PFAM: Resolvase, N-terminal domain; KEGG: xac:XACb0071 Tn5045 resolvase
YP_971286.1	KEGG: rfr:Rfer_2391 extracellular ligand-binding receptor
YP_971287.1	activates fatty acids by binding to coenzyme A
YP_971288.1	PFAM: protein of unknown function UPF0061; KEGG: pol:Bpro_2581 protein of unknown function UPF0061
YP_971289.1	KEGG: pol:Bpro_2582 protein-methionine-S-oxide reductase; TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B
YP_971290.1	Involved in cell division; probably involved in intracellular septation
YP_971291.1	PFAM: BolA family protein; KEGG: pol:Bpro_2584 BolA-like protein
YP_971292.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: rfr:Rfer_2399 PpiC-type peptidyl-prolyl cis-trans isomerase
YP_971293.1	PFAM: protein of unknown function DUF1624; KEGG: rfr:Rfer_2413 protein of unknown function DUF1624
YP_971295.1	stimulates the activities of the other two initiation factors, IF-2 and IF-3
YP_971296.1	catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine
YP_971298.1	TIGRFAM: autotransporter-associated beta strand repeat protein; PFAM: phosphoesterase, PA-phosphatase related; KEGG: bcn:Bcen_6465 autotransporter-associated beta strand repeat
YP_971299.1	PFAM: protein of unknown function DUF6, transmembrane; KEGG: reu:Reut_B4855 protein of unknown function DUF6, transmembrane
YP_971300.1	PFAM: N-formylglutamate amidohydrolase; KEGG: rme:Rmet_2850 N-formylglutamate amidohydrolase
YP_971301.1	catalyzes the deimination of N-formimino-L-glutamate to ammonia and N-formyl-L-glutamate
YP_971302.1	catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway
YP_971303.1	PFAM: protein of unknown function DUF886; KEGG: pol:Bpro_1036 protein of unknown function DUF886
YP_971304.1	PFAM: Phytanoyl-CoA dioxygenase; KEGG: pol:Bpro_1037 phytanoyl-CoA dioxygenase
YP_971305.1	catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism
YP_971306.1	catalyzes the degradation of histidine to urocanate and ammmonia
YP_971307.1	TIGRFAM: histidine utilization repressor; PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated domain protein; KEGG: pol:Bpro_1044 transcriptional regulator, GntR family
YP_971308.1	PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_1045 ABC transporter-related protein
YP_971309.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_1046 binding-protein-dependent transport systems inner membrane component
YP_971310.1	PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: pol:Bpro_1047 extracellular solute-binding protein, family 3
YP_971311.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: reu:Reut_B4970 sulfate transporter/antisigma-factor antagonist STAS
YP_971312.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: reu:Reut_B4971 sulfate transporter/antisigma-factor antagonist STAS
YP_971313.1	PFAM: ATP-binding region, ATPase domain protein; KEGG: reu:Reut_B4972 ATP-binding region, ATPase-like
YP_971314.1	PFAM: ATP-binding region, ATPase domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: reu:Reut_B4973 ATP-binding region, ATPase-like:stage II sporulation E
YP_971315.1	PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; KEGG: reu:Reut_B4974 ATP-binding region, ATPase-like:histidine kinase A, N-terminal
YP_971316.1	KEGG: reu:Reut_B4975 PAS; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_971317.1	KEGG: rpc:RPC_2885 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein
YP_971318.1	PFAM: Haem oxygenase; KEGG: pae:PA4116 hypothetical protein
YP_971319.1	PFAM: GAF domain protein; PAS fold-2 domain protein; KEGG: pae:PA4117 probable bacteriophytochrome
YP_971320.1	PFAM: Integrase, catalytic region; KEGG: bpa:BPP2353 IS1002 transposase
YP_971321.1	PFAM: ATP-binding region, ATPase domain protein; KEGG: pae:PA4117 probable bacteriophytochrome
YP_971322.1	PFAM: response regulator receiver; KEGG: eba:ebD118 CheY-like response regulator domain
YP_971323.1	catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate
YP_971324.1	KEGG: noc:Noc_1740 glycogen debranching enzyme GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain
YP_971325.1	KEGG: tbd:Tbd_1173 alpha amylase, catalytic subdomain; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain
YP_971326.1	amylomaltase; acts to release glucose from maltodextrins
YP_971327.1	TIGRFAM: glycogen/starch synthases, ADP-glucose type; PFAM: glycosyl transferase, group 1; Starch synthase catalytic domain protein; KEGG: eba:ebA6917 putative glycogen synthase
YP_971328.1	PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rfr:Rfer_1977 short-chain dehydrogenase/reductase SDR
YP_971329.1	KEGG: pol:Bpro_2700 ribonuclease R; TIGRFAM: VacB and RNase II family 3'-5' exoribonucleases; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; Ribonuclease B, OB region N-terminal domain; SMART: Cold shock protein
YP_971330.1	KEGG: rfr:Rfer_2656 hypothetical protein
YP_971331.1	PFAM: protein of unknown function DUF748; KEGG: pol:Bpro_2872 protein of unknown function DUF748
YP_971332.1	PFAM: Lytic transglycosylase, catalytic; KEGG: rfr:Rfer_2657 lytic transglycosylase, catalytic
YP_971333.1	catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate
YP_971334.1	PFAM: ATP-cone domain protein; KEGG: pol:Bpro_2875 protein of unknown function DUF193
YP_971335.1	KEGG: ade:Adeh_2056 hypothetical protein
YP_971336.1	catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis
YP_971337.1	PFAM: CBS domain containing protein; KEGG: pol:Bpro_1837 CBS domain
YP_971338.1	catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol
YP_971339.1	PFAM: alpha/beta hydrolase fold; KEGG: rfr:Rfer_3159 alpha/beta hydrolase
YP_971340.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pol:Bpro_2014 HAD-superfamily hydrolase subfamily IA, variant 3
YP_971341.1	PFAM: ferrochelatase; KEGG: pol:Bpro_2013 ferrochelatase
YP_971342.1	PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; KEGG: rso:RS03102 probable two-component sensor kinase transcription regulator protein
YP_971343.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rso:RS03101 probable two-component response regulator transcription regulator protein
YP_971344.1	PFAM: Calcium/calmodulin dependent protein kinase II, association-domain protein; KEGG: rso:RS03100 hypothetical signal peptide protein
YP_971345.1	KEGG: bxe:Bxe_B0339 hypothetical protein
YP_971346.1	KEGG: rso:RSc1334 probable D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane
YP_971348.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: bbr:BB1846 putative ferric siderophore receptor
YP_971349.1	PFAM: PepSY-associated TM helix domain protein; KEGG: neu:NE2432 hypothetical protein
YP_971350.1	PFAM: protein of unknown function DUF112, transmembrane; KEGG: pol:Bpro_2011 protein of unknown function DUF112, transmembrane
YP_971351.1	KEGG: pol:Bpro_2010 hypothetical protein
YP_971352.1	PFAM: uncharacterized protein UPF0065; KEGG: pol:Bpro_2009 uncharacterized protein UPF0065
YP_971353.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pol:Bpro_2008 two component transcriptional regulator, winged helix family
YP_971354.1	PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; Two-component sensor kinase N-terminal domain protein; KEGG: pol:Bpro_2007 periplasmic sensor signal transduction histidine kinase
YP_971355.1	PFAM: Chromate transporter; KEGG: pol:Bpro_3026 chromate transporter
YP_971356.1	PFAM: Chromate transporter; KEGG: pol:Bpro_3027 chromate transporter
YP_971357.1	PFAM: aldo/keto reductase; KEGG: pae:PA3795 probable oxidoreductase
YP_971358.1	PFAM: Silent information regulator protein Sir2; KEGG: rme:Rmet_2090 silent information regulator protein Sir2
YP_971359.1	TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase, substrate binding; KEGG: pol:Bpro_3029 RNA methyltransferase TrmH, group 3
YP_971360.1	PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: rfr:Rfer_2425 ABC transporter-related protein
YP_971361.1	PFAM: lipolytic enzyme, G-D-S-L family; KEGG: pol:Bpro_3031 arylesterase
YP_971362.1	PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzyme; KEGG: rfr:Rfer_2294 Cys/Met metabolism pyridoxal-phosphate-dependent enzyme
YP_971363.1	PFAM: transport-associated; KEGG: pol:Bpro_0874 transport-associated
YP_971364.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: eba:ebA4484 putative sulfate transporter
YP_971365.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rfr:Rfer_1305 diguanylate cyclase
YP_971366.1	PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: rfr:Rfer_1304 cobyrinic acid a,c-diamide synthase
YP_971367.1	PFAM: Rhodanese domain protein; KEGG: pol:Bpro_2894 rhodanese-like
YP_971368.1	PFAM: pirin domain protein; Pirin domain protein; KEGG: pol:Bpro_2897 pirin-like
YP_971369.1	PFAM: flavodoxin/nitric oxide synthase; KEGG: eca:ECA3603 putative flavodoxin
YP_971370.1	PFAM: pirin domain protein; KEGG: pol:Bpro_2901 pirin-like
YP_971371.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rfr:Rfer_1907 transcriptional regulator, LysR family
YP_971372.1	KEGG: rfr:Rfer_1906 FAD dependent oxidoreductase
YP_971373.1	PFAM: glutamyl-tRNA synthetase, class Ic; KEGG: pol:Bpro_2904 glutamate--tRNA ligase
YP_971374.1	tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine
YP_971375.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rfr:Rfer_1673 diguanylate cyclase
YP_971376.1	KEGG: bpa:BPP2870 alanyl-tRNA synthetase; TIGRFAM: alanyl-tRNA synthetase; PFAM: alanyl-tRNA synthetase, class IIc; phosphoesterase, DHHA1; Threonyl/alanyl tRNA synthetase, SAD
YP_971377.1	KEGG: bja:bll0419 hypothetical protein
YP_971378.1	KEGG: bur:Bcep18194_B0964 hypothetical protein
YP_971379.1	PFAM: cytochrome c, class I; KEGG: bpm:BURPS1710b_0038 cytochrome c family protein
YP_971380.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rme:Rmet_1379 transcriptional regulator, LysR family
YP_971381.1	PFAM: TOBE domain protein; KEGG: rfr:Rfer_1774 molybdenum-pterin binding domain
YP_971382.1	PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: rfr:Rfer_1775 ABC transporter-related protein
YP_971383.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rfr:Rfer_1776 binding-protein-dependent transport systems inner membrane component
YP_971384.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: atc:AGR_C_1212 hypothetical protein
YP_971385.1	catalyzes the release of sulfite from alkanesulfonates
YP_971386.1	KEGG: rfr:Rfer_1779 ABC transporter, substrate-binding protein, aliphatic sulphonates; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein, family 3
YP_971387.1	TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: pol:Bpro_2345 thiosulphate-binding protein
YP_971388.1	PFAM: Fe(II) trafficking protein YggX; KEGG: rfr:Rfer_2102 Fe(II) trafficking protein YggX
YP_971389.1	PFAM: FAD dependent oxidoreductase; protein of unknown function DUF752; KEGG: pol:Bpro_2343 protein of unknown function DUF752
YP_971390.1	PFAM: major facilitator superfamily MFS_1; KEGG: bbr:BB4088 probable transporter
YP_971392.1	PFAM: protein of unknown function DUF81; KEGG: rfr:Rfer_2455 protein of unknown function DUF81
YP_971393.1	PFAM: nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: pol:Bpro_2339 nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like
YP_971394.1	PFAM: uncharacterized conserved protein UCP030820; KEGG: pol:Bpro_2338 hypothetical protein
YP_971395.1	with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP
YP_971396.1	KEGG: rfr:Rfer_2460 sulfate adenylyltransferase, large subunit; TIGRFAM: sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor, GTP-binding
YP_971397.1	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: pol:Bpro_2334 4Fe-4S ferredoxin, iron-sulfur binding
YP_971398.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rfr:Rfer_2462 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_971400.1	PFAM: Forkhead-associated protein; KEGG: bur:Bcep18194_B3161 FHA domain containing protein
YP_971401.1	PFAM: protein of unknown function DUF181; KEGG: bcn:Bcen_5136 protein of unknown function DUF181
YP_971402.1	KEGG: xcv:XCV4428 putative avirulence protein AvrRxo1
YP_971403.1	KEGG: xcv:XCV4429 hypothetical protein
YP_971404.1	KEGG: rpa:RPA1061 possible polyketide synthesis protein
YP_971405.1	KEGG: bps:BPSL0599 hypothetical protein
YP_971406.1	PFAM: protein kinase; Tetratricopeptide TPR_2 repeat protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: bte:BTH_I0514 protein kinase domain protein
YP_971407.1	KEGG: pol:Bpro_2331 phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1
YP_971408.1	PFAM: FAD dependent oxidoreductase; KEGG: rfr:Rfer_2464 FAD dependent oxidoreductase
YP_971409.1	TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: bxe:Bxe_A0384 putative sulfur transfer protein involved in thiamine biosynthesis, ThiS
YP_971410.1	functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate
YP_971411.1	KEGG: rfr:Rfer_2467 thiamine-phosphate diphosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase
YP_971412.1	KEGG: rfr:Rfer_3583 hypothetical protein
YP_971413.1	converts 3-hydroxyadipyl-CoA to beta-ketoadipyl-CoA in phenylacetate degradation
YP_971414.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
YP_971415.1	PFAM: cyclic nucleotide-binding; SMART: regulatory protein, Crp; KEGG: pol:Bpro_2959 transcriptional regulator, Crp/Fnr family
YP_971416.1	PFAM: aminoglycoside phosphotransferase; KEGG: rfr:Rfer_3327 aminoglycoside phosphotransferase
YP_971417.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rfr:Rfer_3328 acyl-CoA dehydrogenase-like
YP_971418.1	PFAM: Forkhead-associated protein; adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: rfr:Rfer_2284 putative adenylate/guanylate cyclase
YP_971419.1	PFAM: peptidase U61, LD-carboxypeptidase A; KEGG: pol:Bpro_2448 muramoyltetrapeptide carboxypeptidase
YP_971420.1	PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: pol:Bpro_2447 CMP/dCMP deaminase, zinc-binding
YP_971421.1	KEGG: pol:Bpro_2446 hypothetical protein
YP_971422.1	PFAM: Extracellular ligand-binding receptor; KEGG: rfr:Rfer_0371 extracellular ligand-binding receptor
YP_971423.1	KEGG: xom:XOO_3803 hypothetical protein
YP_971424.1	PFAM: peptidase U32; KEGG: rfr:Rfer_2414 peptidase U32
YP_971426.1	PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; WD40 domain protein beta Propeller; KEGG: sth:STH906 acylaminoacyl-peptidase
YP_971427.1	KEGG: reu:Reut_B4968 O-acetylhomoserine/O-acetylserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzyme; DegT/DnrJ/EryC1/StrS aminotransferase
YP_971428.1	PFAM: protein of unknown function DUF323; KEGG: bbr:BB1966 hypothetical protein
YP_971429.1	KEGG: rfr:Rfer_1610 putative uncharacterized conserved protein
YP_971430.1	PFAM: membrane-bound metal-dependent hydrolase; KEGG: csa:Csal_0683 membrane-bound metal-dependent hydrolase
YP_971431.1	PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; KEGG: mag:amb3735 signal transduction histidine kinase
YP_971432.1	PFAM: OmpW family protein; KEGG: pol:Bpro_0280 OmpW
YP_971433.1	PFAM: protein of unknown function DUF808; KEGG: pen:PSEEN1676 hypothetical protein
YP_971434.1	PFAM: EAL domain protein; GAF domain protein; KEGG: pfl:PFL_1425 GAF domain/GGDEF domain/EAL domain protein
YP_971436.1	KEGG: bur:Bcep18194_A3957 N-acetylmuramoyl-L-alanine amidase, family 2
YP_971437.1	catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis
YP_971438.1	TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: pol:Bpro_2587 methionine aminopeptidase, type I
YP_971439.1	catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein
YP_971440.1	KEGG: pol:Bpro_2590 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase
YP_971441.1	PFAM: protein of unknown function DUF454; KEGG: xcb:XC_0660 hypothetical protein
YP_971442.1	leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys
YP_971443.1	Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate
YP_971444.1	PFAM: regulatory protein, IclR; KEGG: pol:Bpro_2324 transcriptional regulator, IclR family
YP_971445.1	PFAM: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; KEGG: pol:Bpro_2323 peptidase S11, D-alanyl-D-alanine carboxypeptidase 1
YP_971446.1	catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis
YP_971447.1	KEGG: pol:Bpro_2320 CDP-diacylglycerol--serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase
YP_971448.1	catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis
YP_971449.1	with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit
YP_971450.1	acetolactate synthase large subunit; catalyzes the formation of 2-acetolactate from pyruvate
YP_971451.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
YP_971452.1	KEGG: rfr:Rfer_3320 putative transmembrane protein
YP_971453.1	KEGG: rfr:Rfer_3319 putative transmembrane protein
YP_971454.1	PFAM: RDD domain containing protein; KEGG: pol:Bpro_2313 hypothetical protein
YP_971455.1	PFAM: diacylglycerol kinase; KEGG: pol:Bpro_2312 diacylglycerol kinase
YP_971456.1	PFAM: conserved hypothetical protein 730; KEGG: pol:Bpro_2311 conserved hypothetical protein 730
YP_971457.1	PFAM: nitrogen regulatory protein P-II; KEGG: rfr:Rfer_1700 nitrogen regulatory protein P-II (GlnB, GlnK)
YP_971458.1	KEGG: rfr:Rfer_1699 NAD+ synthetase; TIGRFAM: NAD+ synthetase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; NAD+ synthase
YP_971459.1	PFAM: protein of unknown function DUF482; KEGG: pol:Bpro_2308 protein of unknown function DUF482
YP_971460.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: pol:Bpro_1720 transcriptional regulator, LysR family
YP_971461.1	PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: pol:Bpro_1721 peptidase dimerisation
YP_971462.1	PFAM: uncharacterized protein UPF0065; KEGG: pol:Bpro_1722 uncharacterized protein UPF0065
YP_971463.1	PFAM: CheW domain protein; KEGG: rfr:Rfer_1476 CheW protein
YP_971464.1	KEGG: pol:Bpro_1906 3-oxoacid CoA-transferase, subunit B; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase
YP_971465.1	KEGG: pol:Bpro_1905 3-oxoacid CoA-transferase, subunit A; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase
YP_971466.1	KEGG: pol:Bpro_1904 transcriptional regulator, LuxR family; TIGRFAM: PAS sensor protein; PFAM: regulatory protein, LuxR; PAS fold domain protein; SMART: PAS domain containing protein
YP_971467.1	KEGG: xcc:XCC2025 serine protease
YP_971468.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bbr:BB0958 putative NADH dehydrogenase
YP_971469.1	KEGG: dra:DR2196 hypothetical protein
YP_971470.1	KEGG: bxe:Bxe_A0772 haem catalase/peroxidase; TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase
YP_971471.1	TIGRFAM: alkylhydroperoxidase like protein, AhpD family; uncharacterized peroxidase-related enzyme; PFAM: Carboxymuconolactone decarboxylase; KEGG: pol:Bpro_1899 uncharacterized peroxidase-related
YP_971472.1	PFAM: regulatory protein, TetR; KEGG: ccr:CC1664 transcriptional regulator, TetR family
YP_971473.1	KEGG: pae:PA0830 hypothetical protein
YP_971474.1	PFAM: Ankyrin; KEGG: xcv:XCV4121 putative secreted protein
YP_971475.1	PFAM: Catalase domain protein; KEGG: xcb:XC_4037 catalase precursor
YP_971476.1	PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rfr:Rfer_3017 short-chain dehydrogenase/reductase SDR
YP_971477.1	PFAM: FAD dependent oxidoreductase; electron transfer flavoprotein-ubiquinone oxidoreductase; KEGG: rfr:Rfer_3018 electron-transferring-flavoprotein dehydrogenase
YP_971478.1	PFAM: Lipocalin family protein; KEGG: sdy:SDY_4393 outer membrane lipoprotein
YP_971479.1	PFAM: protein of unknown function DUF534; KEGG: bbr:BB3356 hypothetical protein
YP_971480.1	PFAM: inner-membrane translocator; KEGG: pae:PA3837 probable permease of ABC transporter
YP_971481.1	PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pae:PA3838 probable ATP-binding component of ABC transporter
YP_971482.1	PFAM: regulatory protein, AsnC/Lrp family; KEGG: pol:Bpro_4248 transcriptional regulator, AsnC family
YP_971483.1	TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein, C-terminal barrel; KEGG: pol:Bpro_1868 glycine cleavage system T protein
YP_971484.1	TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; KEGG: pol:Bpro_1867 glycine cleavage system H protein
YP_971485.1	acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine
YP_971486.1	PFAM: peptidylprolyl isomerase, FKBP-type; KEGG: rso:RSc1565 putative FKBP-type peptidyl-prolyl cis-trans isomerase signal peptide protein
YP_971487.1	KEGG: rfr:Rfer_2766 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_971488.1	PFAM: pseudouridine synthase; KEGG: tbd:Tbd_0658 ribosomal large subunit pseudouridine synthase A
YP_971489.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bbr:BB2294 short chain dehydrogenase
YP_971490.1	PFAM: uncharacterized protein UPF0065; KEGG: rme:Rmet_4232 uncharacterized protein UPF0065
YP_971491.1	PFAM: UspA domain protein; KEGG: rfr:Rfer_2198 UspA
YP_971492.1	KEGG: mxa:MXAN_6813 hypothetical protein
YP_971493.1	PFAM: type IV pilus assembly PilZ; KEGG: ade:Adeh_2982 hypothetical protein
YP_971494.1	activates fatty acids by binding to coenzyme A
YP_971495.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: pol:Bpro_2956 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
YP_971496.1	PFAM: Extracellular ligand-binding receptor; KEGG: pol:Bpro_2411 extracellular ligand-binding receptor
YP_971497.1	KEGG: pol:Bpro_2410 hypothetical protein
YP_971498.1	PFAM: DNA polymerase III chi subunit, HolC; KEGG: rfr:Rfer_2117 DNA polymerase III chi subunit, HolC
YP_971499.1	PFAM: peptidase M17, leucyl aminopeptidase domain protein; KEGG: pol:Bpro_2408 leucyl aminopeptidase
YP_971500.1	PFAM: permease YjgP/YjgQ family protein; KEGG: rfr:Rfer_2115 permease YjgP/YjgQ
YP_971501.1	PFAM: permease YjgP/YjgQ family protein; KEGG: rfr:Rfer_2114 permease YjgP/YjgQ
YP_971502.1	PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: rfr:Rfer_2113 cobalamin (vitamin B12) biosynthesis CbiX protein
YP_971503.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rfr:Rfer_2112 transcriptional regulator, LysR family
YP_971504.1	catalyzes the transfer of an amino moiety
YP_971505.1	KEGG: bpe:BP0300 putative esterase
YP_971506.1	PFAM: Endoribonuclease L-PSP; KEGG: rso:RS02014 hypothetical protein
YP_971507.1	PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_5131 ABC transporter-related protein
YP_971508.1	PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_5130 ABC transporter-related protein
YP_971509.1	PFAM: inner-membrane translocator; KEGG: pol:Bpro_5129 inner-membrane translocator
YP_971510.1	PFAM: inner-membrane translocator; KEGG: pol:Bpro_5128 inner-membrane translocator
YP_971511.1	PFAM: Extracellular ligand-binding receptor; KEGG: dar:Daro_4043 extracellular ligand-binding receptor
YP_971512.1	PFAM: AMP-dependent synthetase and ligase; KEGG: rso:RS02012 probable acetyl-coenzyme A synthetase (acetate--CoA ligase) protein
YP_971513.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rso:RS02011 probable acyl-CoA dehydrogenase oxidoreductase protein
YP_971514.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
YP_971515.1	PFAM: regulatory protein, MarR; KEGG: rso:RS02009 putative transcription regulator protein
YP_971516.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: rso:RS02008 probable oxidoreductase protein
YP_971517.1	catalyzes the conversion of salicylyl-CoA to gentisyl-CoA
YP_971519.1	PFAM: alpha/beta hydrolase fold; KEGG: bxe:Bxe_B1312 putative hydrolase
YP_971520.1	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; KEGG: psp:PSPPH_1479 sensory box histidine kinase
YP_971521.1	PFAM: ribonuclease T2; KEGG: pen:PSEEN2564 ribonuclease
YP_971522.1	KEGG: sat:SYN_02907 ATP-dependent endonuclease family protein
YP_971523.1	PFAM: UvrD/REP helicase; KEGG: sat:SYN_02908 ATP-dependent DNA helicase
YP_971524.1	KEGG: pst:PSPTO_0478 hypothetical protein
YP_971525.1	PFAM: transposase IS3/IS911 family protein; KEGG: mxa:MXAN_1716 transposase orfA, IS3 family
YP_971526.1	PFAM: Integrase, catalytic region; KEGG: mxa:MXAN_4473 transposase orfB, IS3 family
YP_971527.1	KEGG: bur:Bcep18194_B1775 hypothetical protein
YP_971533.1	TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: rfr:Rfer_2082 ribonuclease, Rne/Rng family
YP_971534.1	TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: rme:Rmet_0779 maf protein
YP_971535.1	SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA
YP_971536.1	TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: rfr:Rfer_2079 iojap-related protein
YP_971537.1	catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis
YP_971538.1	catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis
YP_971539.1	PFAM: protein of unknown function DUF28; KEGG: rfr:Rfer_2075 protein of unknown function DUF28
YP_971540.1	PFAM: protein of unknown function DUF853, NPT hydrolase putative; KEGG: pol:Bpro_1966 protein of unknown function DUF853, NPT hydrolase putative
YP_971541.1	PFAM: beta-lactamase domain protein; KEGG: rso:RSc1544 hypothetical protein
YP_971542.1	PFAM: MmgE/PrpD family protein; KEGG: bbr:BB2960 hypothetical protein
YP_971543.1	PFAM: Integrase, catalytic region; KEGG: bpa:BPP1897 IS1002 transposase
YP_971544.1	PFAM: regulatory protein, IclR; KEGG: bps:BPSS2158 IclR family transcriptional regulator
YP_971545.1	PFAM: FAD linked oxidase domain protein; KEGG: eba:ebA4737 FAD dependent oxidoreductase
YP_971546.1	TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; KEGG: eca:ECA4197 probable lyase
YP_971547.1	PFAM: uncharacterized protein UPF0065; KEGG: pol:Bpro_2294 uncharacterized protein UPF0065
YP_971548.1	PFAM: Rhodanese domain protein; KEGG: bcn:Bcen_4490 3-mercaptopyruvate sulfurtransferase
YP_971549.1	PFAM: uncharacterized protein UPF0065; KEGG: rme:Rmet_4286 uncharacterized protein UPF0065
YP_971550.1	PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: bbr:BB1545 putative biotin sulfoxide reductase
YP_971551.1	PFAM: glutathione S-transferase, N-terminal domain; glutathione S-transferase, C-terminal domain; KEGG: bpm:BURPS1710b_3416 putative glutathione S-transferase-like protein
YP_971552.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: fal:FRAAL4772 putative enoyl-CoA hydratase/isomerase family protein
YP_971553.1	PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: pol:Bpro_3215 pyridoxal-5'-phosphate-dependent enzyme, beta subunit
YP_971554.1	Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate
YP_971555.1	PFAM: GCN5-related N-acetyltransferase; KEGG: reu:Reut_A1932 GCN5-related N-acetyltransferase
YP_971557.1	Catalyzes the deamination of cytosine to uracil and ammonia
YP_971558.1	PFAM: transcriptional regulator domain protein; Tetratricopeptide TPR_4; KEGG: bja:bll1217 hypothetical protein
YP_971561.1	KEGG: rfr:Rfer_0638 hypothetical protein
YP_971562.1	KEGG: rfr:Rfer_0639 hypothetical protein
YP_971563.1	KEGG: pol:Bpro_3896 hypothetical protein
YP_971564.1	PFAM: heat shock protein DnaJ domain protein; KEGG: pol:Bpro_3897 heat shock protein DnaJ-like
YP_971565.1	PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: bcn:Bcen_2208 transposase IS116/IS110/IS902
YP_971566.1	PFAM: aldehyde dehydrogenase; KEGG: reu:Reut_B3678 aldehyde dehydrogenase (NAD+)
YP_971567.1	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bmb:BruAb1_0198 alcohol dehydrogenase, zinc-containing
YP_971568.1	PFAM: protein of unknown function DUF779; KEGG: aeh:Mlg_2727 protein of unknown function DUF779
YP_971570.1	PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; GAF domain protein; SMART: AAA ATPase; KEGG: bcn:Bcen_3245 GAF modulated sigma54 specific transcriptional regulator, fis family
YP_971571.1	PFAM: Silent information regulator protein Sir2; KEGG: xcb:XC_0318 NAD-dependent deacetylase
YP_971572.1	Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates
YP_971573.1	TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: rfr:Rfer_0327 lytic murein transglycosylase
YP_971574.1	KEGG: pol:Bpro_2940 ATPase AAA-2; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase
YP_971575.1	involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA
YP_971576.1	KEGG: rfr:Rfer_2040 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP C-terminal domain protein; nucleic acid binding, OB-fold, tRNA/helicase-type; SMART: phosphoesterase PHP domain protein
YP_971577.1	KEGG: rfr:Rfer_2315 putative transmembrane protein
YP_971578.1	SMART: helicase c2; DEAD-like helicases-like; KEGG: rfr:Rfer_2316 helicase C2
YP_971579.1	SMART: protein phosphatase 2C domain protein; KEGG: pol:Bpro_2619 protein serine/threonine phosphatase
YP_971580.1	KEGG: pol:Bpro_2620 hypothetical protein
YP_971581.1	PFAM: AFG1-family ATPase; KEGG: pol:Bpro_2621 AFG1-like ATPase
YP_971582.1	E3 component of 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide
YP_971583.1	TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: pol:Bpro_2623 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase
YP_971584.1	SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide
YP_971585.1	PFAM: protein of unknown function UPF0118; KEGG: pae:PA2651 hypothetical protein
YP_971586.1	KEGG: cvi:CV1620 hypothetical protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_971587.1	PFAM: ABC transporter-related protein; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; KEGG: pol:Bpro_2423 ABC transporter-related protein
YP_971588.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rfr:Rfer_2130 binding-protein-dependent transport systems inner membrane component
YP_971589.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rfr:Rfer_2129 binding-protein-dependent transport systems inner membrane component
YP_971590.1	PFAM: extracellular solute-binding protein, family 5; KEGG: rfr:Rfer_2128 extracellular solute-binding protein, family 5
YP_971591.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pol:Bpro_2419 short-chain dehydrogenase/reductase SDR
YP_971592.1	PFAM: beta-Ig-H3/fasciclin; KEGG: xcv:XCV3824 putative secreted protein
YP_971593.1	PFAM: Orn/Lys/Arg decarboxylase, major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: pol:Bpro_2415 lysine decarboxylase
YP_971594.1	PFAM: protein of unknown function DUF107; KEGG: rfr:Rfer_2125 protein of unknown function DUF107
YP_971595.1	PFAM: band 7 protein; KEGG: pol:Bpro_2413 band 7 protein
YP_971596.1	KEGG: rde:RD1_4058 hypothetical protein
YP_971597.1	KEGG: sfr:Sfri_3617 hypothetical protein
YP_971598.1	PFAM: transposase, IS4 family protein; KEGG: bxe:Bxe_C0489 putative transposase IS4
YP_971599.1	KEGG: hch:HCH_04431 hypothetical protein
YP_971601.1	KEGG: xoo:XOO0986 hypothetical protein
YP_971602.1	PFAM: extracellular solute-binding protein, family 1; KEGG: reu:Reut_B4414 putative molybdate transport system substrate-binding protein
YP_971603.1	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: xcb:XC_2137 TonB-dependent receptor
YP_971605.1	PFAM: uncharacterized protein UPF0065; KEGG: rme:Rmet_3927 twin-arginine translocation pathway signal
YP_971606.1	PFAM: protein of unknown function DUF112, transmembrane; KEGG: rme:Rmet_0825 protein of unknown function DUF112, transmembrane
YP_971607.1	PFAM: protein of unknown function DUF1468; KEGG: mes:Meso_2388 hypothetical protein
YP_971608.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bpa:BPP2632 two-component response regulatory protein
YP_971609.1	PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; KEGG: dar:Daro_0430 ATP-binding region, ATPase-like:histidine kinase, HAMP region:histidine kinase A, N-terminal
YP_971611.1	KEGG: pol:Bpro_1798 phosphoglycolate phosphatase; TIGRFAM: phosphoglycolate phosphatase ; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase
YP_971612.1	Involved in ubiquinone biosynthesis
YP_971613.1	PFAM: OmpA/MotB domain protein; KEGG: pol:Bpro_1796 OmpA/MotB
YP_971614.1	negatively supercoils closed circular double-stranded DNA
YP_971615.1	catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine
YP_971616.1	TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; Chorismate mutase; amino acid-binding ACT domain protein; KEGG: pol:Bpro_1792 chorismate mutase
YP_971617.1	PFAM: Prephenate dehydrogenase; 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: rfr:Rfer_1568 prephenate dehydrogenase
YP_971618.1	catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; catalyzes CMP phosphorylation
YP_971619.1	in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins
YP_971620.1	PFAM: histone family protein DNA-binding protein; KEGG: pol:Bpro_1788 integration host factor, beta subunit
YP_971621.1	KEGG: pol:Bpro_1787 hypothetical protein
YP_971622.1	PFAM: Tetratricopeptide TPR_4; KEGG: rfr:Rfer_1563 putative transmembrane protein
YP_971623.1	subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+
YP_971624.1	subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali
YP_971625.1	subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone
YP_971626.1	subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport
YP_971627.1	PFAM: multiple resistance and pH regulation protein F; KEGG: bbr:BB3041 multicomponent K+:H+ antiporter subunit F
YP_971628.1	PFAM: Na+/H+ antiporter subunit; KEGG: pfl:PFL_2606 potassium efflux system protein PhaG
YP_971629.1	PFAM: Hydantoinase/oxoprolinase; Hydantoinase B/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: pol:Bpro_1781 5-oxoprolinase (ATP-hydrolyzing)
YP_971630.1	KEGG: bbr:BB4978 hypothetical protein
YP_971631.1	PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: pol:Bpro_1774 TRAP dicarboxylate transporter-DctP subunit
YP_971632.1	KEGG: pol:Bpro_1778 hypothetical protein
YP_971633.1	TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: pol:Bpro_1779 TRAP dicarboxylate transporter-DctM subunit
YP_971634.1	may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling
YP_971635.1	PFAM: conserved hypothetical protein 730; KEGG: pol:Bpro_3075 conserved hypothetical protein 730
YP_971636.1	KEGG: dme:Dmel_CG7274 CG7274
YP_971637.1	PFAM: major facilitator superfamily MFS_1; KEGG: pol:Bpro_3076 major facilitator superfamily MFS_1
YP_971638.1	PFAM: protein of unknown function DUF195; KEGG: bbr:BB3410 conserved hypothetical lipoprotein
YP_971639.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: pol:Bpro_3078 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
YP_971640.1	catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate
YP_971641.1	KEGG: bcn:Bcen_5852 gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase
YP_971642.1	PFAM: thioesterase superfamily protein; KEGG: rfr:Rfer_2141 thioesterase superfamily
YP_971643.1	TIGRFAM: phasin family protein; KEGG: pol:Bpro_3088 phasin
YP_971644.1	PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: pol:Bpro_3050 hypothetical protein
YP_971645.1	TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: pol:Bpro_3051 TonB-like
YP_971646.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: pol:Bpro_3052 MotA/TolQ/ExbB proton channel
YP_971647.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: pol:Bpro_3053 biopolymer transport protein ExbD/TolR
YP_971648.1	KEGG: pol:Bpro_3054 hypothetical protein
YP_971649.1	PFAM: protein of unknown function DUF336; KEGG: pol:Bpro_3055 protein of unknown function DUF336
YP_971650.1	PFAM: protein of unknown function UPF0005; KEGG: rfr:Rfer_2776 protein of unknown function UPF0005
YP_971651.1	KEGG: rfr:Rfer_2777 hypothetical protein
YP_971652.1	in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S]
YP_971654.1	PFAM: regulatory protein, AsnC/Lrp family; KEGG: pol:Bpro_0399 transcriptional regulator, AsnC family
YP_971655.1	TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: aldehyde dehydrogenase; Proline dehydrogenase; KEGG: psb:Psyr_0506 delta-1-pyrroline-5-carboxylate dehydrogenase 3
YP_971656.1	KEGG: bbr:BB2665 hypothetical protein
YP_971657.1	PFAM: transport system permease protein; KEGG: mlo:mlr8229 ABC transporter, permease protein
YP_971658.1	PFAM: periplasmic binding protein; KEGG: mlo:mlr8228 iron (III) ABC transporter, periplasmic-binding protein
YP_971659.1	PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: eca:ECA4254 putative iron(III) ABC transporter ATP-binding protein
YP_971660.1	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: xac:XAC4062 TonB-dependent receptor
YP_971661.1	PFAM: glutathione S-transferase, C-terminal domain; KEGG: bpa:BPP0666 glutathione S-transferase
YP_971662.1	PFAM: uncharacterized protein UPF0065; KEGG: bpa:BPP0667 hypothetical protein
YP_971663.1	PFAM: uncharacterized protein UPF0065; KEGG: pol:Bpro_5112 uncharacterized protein UPF0065
YP_971664.1	PFAM: regulatory protein, IclR; KEGG: bja:bll6383 transcriptional regulatory protein
YP_971665.1	PFAM: NUDIX hydrolase; KEGG: bte:BTH_II0273 conserved hypothetical protein TIGR00052
YP_971666.1	PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: bxe:Bxe_B2951 cold-shock DNA-binding domain protein
YP_971667.1	KEGG: dar:Daro_2061 hypothetical protein
YP_971668.1	PFAM: protein of unknown function UPF0074; Helix-turn-helix, type 11 domain protein; KEGG: rpb:RPB_3952 transcriptional regulator, BadM/Rrf2 family
YP_971669.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rpb:RPB_3951 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_971670.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rpb:RPB_3655 SAM binding protein
YP_971671.1	KEGG: pen:PSEEN2321 hypothetical protein
YP_971672.1	KEGG: bld:BLi00935 YxiD
YP_971673.1	PFAM: Integrase, catalytic region; KEGG: eba:ebA5932 transposase
YP_971674.1	KEGG: eba:ebA5933 transposition helper protein
YP_971675.1	PFAM: RHS protein; KEGG: bur:Bcep18194_B0648 rhs family protein
YP_971677.1	TIGRFAM: YD repeat protein; PFAM: YD repeat-containing protein; PAAR repeat-containing protein; KEGG: bur:Bcep18194_B0648 rhs family protein
YP_971678.1	KEGG: yps:YPTB3622 hypothetical protein
YP_971679.1	PFAM: Rhs element Vgr protein; KEGG: bur:Bcep18194_B1581 rhs element Vgr protein
YP_971681.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bcn:Bcen_4368 short-chain dehydrogenase/reductase SDR
YP_971682.1	KEGG: rru:Rru_A0338 hypothetical protein
YP_971683.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: mlo:mll1582 probable transcriptional regulator
YP_971684.1	PFAM: Integrase, catalytic region; KEGG: bpa:BPP2353 IS1002 transposase
YP_971685.1	PFAM: Integrase, catalytic region; KEGG: mxa:MXAN_4473 transposase orfB, IS3 family
YP_971686.1	PFAM: transposase IS3/IS911 family protein; KEGG: mxa:MXAN_1716 transposase orfA, IS3 family
YP_971687.1	PFAM: type III restriction enzyme, res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases-like; KEGG: tbd:Tbd_2685 DEAD/DEAH box helicase
YP_971688.1	KEGG: bxe:Bxe_A3669 hypothetical protein
YP_971689.1	PFAM: SMC domain protein; SMART: AAA ATPase; KEGG: psb:Psyr_3137 ATPas
YP_971690.1	PFAM: restriction modification system DNA specificity domain; KEGG: fra:Francci3_4012 restriction modification system DNA specificity domain
YP_971691.1	PFAM: N-6 DNA methylase; KEGG: tbd:Tbd_2680 type I restriction-modification system methyltransferase subunit
YP_971692.1	PFAM: restriction endonuclease; KEGG: xom:XOO_3263 hypothetical protein
YP_971693.1	PFAM: regulatory protein, MarR; KEGG: pae:PA2736 hypothetical protein
YP_971694.1	PFAM: Prophage CP4-57 regulatory; KEGG: xac:XAC2180 hypothetical protein
YP_971695.1	KEGG: rme:Rmet_1467 prophage CP4-57 regulatory
YP_971696.1	KEGG: xac:XAC2181 hypothetical protein
YP_971697.1	KEGG: xac:XAC2182 hypothetical protein
YP_971698.1	PFAM: phage integrase family protein; KEGG: xac:XAC2183 phage-related integrase
YP_971699.1	contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway
YP_971700.1	KEGG: gvi:gll1679 hypothetical protein
YP_971701.1	TIGRFAM: prevent-host-death family protein; KEGG: eba:ebB209 prevent-host-death family protein
YP_971702.1	KEGG: rfr:Rfer_2288 inosine-5'-monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: CBS domain containing protein; IMP dehydrogenase/GMP reductase; 2-nitropropane dioxygenase, NPD
YP_971703.1	KEGG: pol:Bpro_2439 hypothetical protein
YP_971704.1	PFAM: protein of unknown function UPF0125; KEGG: rfr:Rfer_2290 protein of unknown function UPF0125
YP_971705.1	PFAM: cyclase/dehydrase; KEGG: rfr:Rfer_2291 cyclase/dehydrase
YP_971706.1	binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation
YP_971707.1	PFAM: Secreted repeat of unknown function; KEGG: dar:Daro_0520 secreted repeat of unknown function
YP_971708.1	PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: rfr:Rfer_2548 sigma-24 (FecI-like)
YP_971709.1	KEGG: rfr:Rfer_2549 putative transmembrane transcriptional regulator
YP_971710.1	catalyzes the formation of 3-hydroxy-2-methylpropanoate from 3-hydroxy-2-methylpropanoyl-CoA
YP_971711.1	PFAM: CBS domain containing protein; transporter-associated region; Integral membrane protein TerC; KEGG: rme:Rmet_1762 integral membrane protein TerC
YP_971712.1	TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor, GTP-binding; elongation factor Tu, domain 2 protein; KEGG: pol:Bpro_2429 GTP-binding protein TypA
YP_971713.1	catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs
YP_971714.1	associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock
YP_971715.1	Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
YP_971716.1	KEGG: pol:Bpro_2425 NusA antitermination factor; TIGRFAM: transcription termination factor NusA; PFAM: RNA binding S1 domain protein; KH, type 1, domain protein; NusA N-terminal domain protein; SMART: KH domain protein
YP_971717.1	PFAM: protein of unknown function DUF150; KEGG: rfr:Rfer_2132 protein of unknown function DUF150
YP_971718.1	KEGG: pol:Bpro_1834 hypothetical protein
YP_971719.1	PFAM: cytochrome c, class I; KEGG: pol:Bpro_3449 cytochrome c, class I
YP_971720.1	KEGG: pol:Bpro_3448 putative cytochrome c
YP_971721.1	KEGG: psb:Psyr_3815 hypothetical protein
YP_971722.1	PFAM: uncharacterized protein UPF0065; KEGG: reu:Reut_B5400 hypothetical protein
YP_971723.1	KEGG: bbr:BB3205 hypothetical protein
YP_971724.1	PFAM: protein of unknown function DUF1446; KEGG: bbr:BB3206 hypothetical protein
YP_971725.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bbr:BB3207 probable LysR-family transcriptional regulator
YP_971726.1	PFAM: Integrase, catalytic region; KEGG: bpa:BPP1897 IS1002 transposase
YP_971728.1	PFAM: cellulose-binding, family II; Rare lipoprotein A; KEGG: hch:HCH_03669 endoglucanase C-terminal domain/subunit and related protein
YP_971729.1	KEGG: aci:ACIAD3153 hypothetical protein
YP_971730.1	PFAM: DNA/RNA non-specific endonuclease; KEGG: pol:Bpro_5192 DNA/RNA non-specific endonuclease
YP_971731.1	KEGG: pol:Bpro_2307 hypothetical protein
YP_971732.1	catalyzes the formation of L-proline from L-ornithine
YP_971733.1	PFAM: Extracellular ligand-binding receptor; KEGG: bxe:Bxe_B1023 ABC branched chain amino acid family transporter, periplasmic ligand binding protein
YP_971734.1	PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: rfr:Rfer_2095 UBA/ThiF-type NAD/FAD binding protein
YP_971735.1	PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: rfr:Rfer_2094 tetratricopeptide TPR_2
YP_971736.1	TIGRFAM: OmpA domain protein; PFAM: OmpA/MotB domain protein; KEGG: rfr:Rfer_2093 OmpA/MotB
YP_971737.1	forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA
YP_971738.1	KEGG: pol:Bpro_1979 lipid A export ATP-binding/permease protein MsbA; TIGRFAM: lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; PFAM: ABC transporter, transmembrane region; ABC transporter-related protein; SMART: AAA ATPase
YP_971739.1	PFAM: Ankyrin; KEGG: pol:Bpro_2515 ankyrin
YP_971740.1	TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: rfr:Rfer_2258 TatD-related deoxyribonuclease
YP_971741.1	PFAM: type IV pilus assembly PilZ; KEGG: pol:Bpro_2517 type IV pilus assembly PilZ
YP_971742.1	KEGG: rfr:Rfer_2256 DNA-directed DNA polymerase
YP_971743.1	PFAM: thymidylate kinase; KEGG: pol:Bpro_2519 thymidylate kinase
YP_971744.1	PFAM: aminodeoxychorismate lyase; KEGG: pol:Bpro_2520 aminodeoxychorismate lyase
YP_971745.1	PFAM: glycine cleavage T protein (aminomethyl transferase); KEGG: pol:Bpro_2521 glycine cleavage T protein (aminomethyl transferase)
YP_971746.1	PFAM: GCN5-related N-acetyltransferase; thioesterase superfamily protein; KEGG: pol:Bpro_2524 4-hydroxybenzoyl-CoA thioesterase
YP_971747.1	PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: pol:Bpro_2525 alpha/beta hydrolase fold-3
YP_971748.1	PFAM: Hydratase/decarboxylase; KEGG: dar:Daro_4183 hydratase/decarboxylase
YP_971749.1	PFAM: iron-containing alcohol dehydrogenase; KEGG: pol:Bpro_2526 iron-containing alcohol dehydrogenase
YP_971750.1	KEGG: pen:PSEEN1911 hypothetical protein
YP_971751.1	TIGRFAM: metal dependent phophohydrolase; PFAM: HDOD; KEGG: rfr:Rfer_2482 putative signal transduction protein
YP_971752.1	PFAM: RNA binding S1 domain protein; SMART: Resolvase, RNase H domain protein fold; KEGG: pol:Bpro_2537 RNA binding S1
YP_971755.1	PFAM: Integrase, catalytic region; KEGG: bpa:BPP2353 IS1002 transposase
YP_971756.1	PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: rfr:Rfer_3177 outer membrane lipoprotein carrier protein LolA
YP_971757.1	PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: pol:Bpro_3799 cell divisionFtsK/SpoIIIE
YP_971758.1	TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pol:Bpro_3801 thioredoxin reductase
YP_971759.1	required for 70S ribosome assembly
YP_971760.1	in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif
YP_971761.1	PFAM: regulatory protein GntR, HTH; aminotransferase, class I and II; KEGG: rso:RSc0599 putative transcription regulator protein
YP_971763.1	PFAM: fatty acid desaturase; KEGG: pol:Bpro_3804 fatty acid desaturase
YP_971764.1	PFAM: Fmu (Sun) domain protein; KEGG: rfr:Rfer_3183 Fmu (Sun)
YP_971765.1	PFAM: Pectate lyase/Amb allergen; KEGG: bsu:BG10840 pectate lyase
YP_971766.1	PFAM: protein of unknown function DUF1653; KEGG: pol:Bpro_3807 protein of unknown function DUF1653
YP_971767.1	KEGG: tbd:Tbd_2249 hypothetical protein
YP_971768.1	glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate
YP_971769.1	PFAM: protein of unknown function DUF480; KEGG: rfr:Rfer_1648 protein of unknown function DUF480
YP_971770.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: pol:Bpro_3845 acyl-CoA dehydrogenase-like
YP_971771.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: pol:Bpro_3846 acyl-CoA dehydrogenase-like
YP_971773.1	PFAM: glycoside hydrolase, family 18; SMART: chitinase II; KEGG: cvi:CV4240 probable chitinase
YP_971774.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: xac:XAC4125 hypothetical protein
YP_971775.1	PFAM: chemotaxis sensory transducer; KEGG: rfr:Rfer_2225 methyl-accepting chemotaxis sensory transducer
YP_971776.1	TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: pol:Bpro_4880 TRAP dicarboxylate transporter-DctM subunit
YP_971777.1	PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: pol:Bpro_4881 tripartite ATP-independent periplasmic transporter, DctQ component
YP_971778.1	TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: bbr:BB3421 putative periplasmic substrate-binding transport protein
YP_971779.1	PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: pol:Bpro_3847 HNH endonuclease
YP_971780.1	catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities
YP_971781.1	TIGRFAM: isoleucyl-tRNA synthetase; KEGG: pol:Bpro_3849 isoleucyl-tRNA synthetase
YP_971782.1	lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis
YP_971783.1	KEGG: rso:RSc3369 putative avrPphE avirulence protein-homolog
YP_971784.1	PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: bbr:BB4926 probable LacI-family transcriptional regulator
YP_971785.1	KEGG: rme:Rmet_4840 putative periplasmic solute-binding protein
YP_971786.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rme:Rmet_4841 binding-protein-dependent transport systems inner membrane component
YP_971787.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpm:BURPS1710b_1541 ABC transporter, permease protein
YP_971788.1	PFAM: ABC transporter-related protein; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rme:Rmet_4843 ABC transporter-related protein
YP_971789.1	PFAM: metallophosphoesterase; KEGG: bbr:BB4931 putative cAMP phosphodiesterase
YP_971791.1	PFAM: transposase, IS4 family protein; KEGG: rso:RSc1704 ISRSO18-transposase protein
YP_971792.1	TIGRFAM: Na/Pi-cotransporter II-related protein; PFAM: Na+/Pi-cotransporter; KEGG: pol:Bpro_3851 Na/Pi cotransporter II-related
YP_971793.1	KEGG: rso:RSc0868 probable YopP/AvrRxv family protein
YP_971794.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rme:Rmet_3079 transcriptional regulator, LysR family
YP_971795.1	KEGG: reu:Reut_A2880 4-oxalocrotonate tautomerase
YP_971796.1	PFAM: Bile acid:sodium symporter; KEGG: pae:PA2026 conserved hypothetical protein
YP_971797.1	KEGG: rso:RSc1820 hypothetical protein
YP_971798.1	PFAM: NUDIX hydrolase; KEGG: pol:Bpro_3852 NUDIX hydrolase
YP_971799.1	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rfr:Rfer_1429 alcohol dehydrogenase, zinc-binding
YP_971800.1	PFAM: protein of unknown function DUF6, transmembrane; KEGG: rfr:Rfer_1426 protein of unknown function DUF6, transmembrane
YP_971802.1	KEGG: psp:PSPPH_4981 hypothetical protein
YP_971804.1	KEGG: bur:Bcep18194_B1335 hypothetical protein
YP_971805.1	KEGG: bld:BLi02705 hypothetical protein
YP_971806.1	KEGG: ppu:PP_3108 rhs-related protein
YP_971807.1	KEGG: bfs:BF1754 hypothetical protein
YP_971808.1	TIGRFAM: YD repeat protein; PFAM: YD repeat-containing protein; KEGG: bxe:Bxe_A4426 rhs family protein
YP_971809.1	KEGG: lic:LIC12261 hypothetical protein
YP_971810.1	TIGRFAM: YD repeat protein; KEGG: bxe:Bxe_A4426 rhs family protein
YP_971811.1	KEGG: mxa:MXAN_2097 hypothetical protein
YP_971812.1	KEGG: ade:Adeh_0244 LigA
YP_971813.1	KEGG: rsp:RSP_3467 hypothetical protein
YP_971815.1	PFAM: Rhs element Vgr protein; Gp5 domain protein; KEGG: bps:BPSS2093 hypothetical protein
YP_971816.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: rfr:Rfer_1427 diguanylate cyclase/phosphodiesterase
YP_971817.1	PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: rfr:Rfer_1428 putative transport protein
YP_971818.1	PFAM: metallophosphoesterase; KEGG: rfr:Rfer_2358 metallophosphoesterase
YP_971819.1	PFAM: diacylglycerol kinase, catalytic region; KEGG: rfr:Rfer_2359 diacylglycerol kinase
YP_971820.1	PFAM: phosphoesterase, PA-phosphatase related; KEGG: bbr:BB3846 hypothetical protein
YP_971821.1	PFAM: major facilitator superfamily MFS_1; KEGG: reu:Reut_B4575 putative transport transmembrane protein
YP_971822.1	TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rxy:Rxyl_0508 haloacid dehalogenase, type II
YP_971823.1	PFAM: Cold-shock protein, DNA-binding; protein of unknown function DUF1294; SMART: Cold shock protein; KEGG: dar:Daro_3443 cold-shock protein, DNA-binding:protein of unknown function DUF1294
YP_971824.1	PFAM: type IV pilus assembly PilZ; KEGG: ava:Ava_4698 adenylate/guanylate cyclase
YP_971825.1	PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_1397 ABC transporter-related protein
YP_971826.1	PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_1396 ABC transporter-related protein
YP_971827.1	PFAM: inner-membrane translocator; KEGG: pol:Bpro_1395 inner-membrane translocator
YP_971828.1	PFAM: inner-membrane translocator; KEGG: pol:Bpro_1394 inner-membrane translocator
YP_971829.1	KEGG: rfr:Rfer_3381 twin-arginine translocation pathway signal
YP_971830.1	involved in the transport of C4-dicarboxylates across the membrane
YP_971831.1	KEGG: pst:PSPTO_4722 type III effector HopAO1
YP_971834.1	PFAM: YceI family protein; KEGG: ngo:NGO0558 hypothetical protein
YP_971835.1	PFAM: YceI family protein; KEGG: reu:Reut_A2817 YceI
YP_971836.1	PFAM: cytochrome B561; KEGG: bur:Bcep18194_A3802 cytochrome b561
YP_971838.1	KEGG: xac:XAC1241 hypothetical protein
YP_971839.1	PFAM: biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: reu:Reut_A2451 biotin/lipoyl attachment:carbamoyl-phosphate synthase L chain, ATP-binding:carbamoyl-phosphate synthetase large chain, N-terminal:biotin carboxylase, C-terminal
YP_971840.1	PFAM: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1; KEGG: rfr:Rfer_0869 hypothetical protein
YP_971841.1	PFAM: protein of unknown function DUF1445; KEGG: reu:Reut_A2449 hypothetical protein
YP_971842.1	PFAM: LamB/YcsF family protein; KEGG: rfr:Rfer_0870 LamB/YcsF
YP_971843.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: reu:Reut_A2448 general substrate transporter:major facilitator superfamily MFS_1
YP_971844.1	PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: rfr:Rfer_0874 transcriptional regulator, GntR family
YP_971845.1	KEGG: dar:Daro_3102 hypothetical protein
YP_971846.1	PFAM: monooxygenase, FAD-binding; KEGG: gbe:GbCGDNIH1_1052 monooxygenase
YP_971847.1	PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; KEGG: reu:Reut_B4368 ATP-binding region, ATPase-like:histidine kinase A, N-terminal
YP_971848.1	flavin mononucleotide-dependent dehydrogenase; functions in aerobic respiration and also has a role in anaerobic nitrate respiration
YP_971849.1	KEGG: eba:ebA6860 predicted integral membrane protein
YP_971850.1	KEGG: eba:ebA6866 hypothetical protein
YP_971851.1	KEGG: sma:SAV1685 hypothetical protein
YP_971852.1	KEGG: pen:PSEEN1307 sensory box-containing diguanylate cyclase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; CHASE4 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein
YP_971853.1	PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: rfr:Rfer_3397 two component transcriptional regulator, LuxR family
YP_971854.1	PFAM: permease for cytosine/purines, uracil, thiamine, allantoin; response regulator receiver; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; KEGG: pol:Bpro_1353 periplasmic sensor hybrid histidine kinase
YP_971855.1	KEGG: pol:Bpro_1352 urease, gamma subunit; TIGRFAM: urease, gamma subunit; PFAM: Urease, gamma subunit region
YP_971856.1	PFAM: HupE/UreJ protein; KEGG: reu:Reut_A0993 HupE/UreJ protein
YP_971857.1	KEGG: pol:Bpro_1351 urease, beta subunit; TIGRFAM: urease, beta subunit; PFAM: Urease, beta subunit
YP_971858.1	ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits
YP_971859.1	PFAM: GCN5-related N-acetyltransferase; KEGG: she:Shewmr4_0328 GCN5-related N-acetyltransferase
YP_971860.1	PFAM: UreE urease accessory domain protein; UreE urease accessory domain protein; KEGG: pol:Bpro_1349 UreE urease accessory-like
YP_971861.1	PFAM: Urease accessory protein UreF; KEGG: pol:Bpro_1348 urease accessory protein UreF
YP_971862.1	TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein, P47K; KEGG: pol:Bpro_1347 urease accessory protein UreG
YP_971863.1	KEGG: nwi:Nwi_2088 Y4BN
YP_971864.1	PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; KEGG: nwi:Nwi_2089 AAA ATPase
YP_971865.1	KEGG: bcn:Bcen_4795 hypothetical protein
YP_971866.1	PFAM: regulatory protein, TetR; KEGG: pen:PSEEN2158 transcriptional regulator, TetR family
YP_971867.1	PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: pae:PA1225 probable NAD(P)H dehydrogenase
YP_971868.1	PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; KEGG: nmu:Nmul_A1000 histidine kinase
YP_971871.1	PFAM: EAL domain protein; KEGG: xcb:XC_1411 response regulator
YP_971872.1	PFAM: MCP methyltransferase, CheR-type; KEGG: xcv:XCV3024 methylase of chemotaxis methyl-accepting protein
YP_971873.1	regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins
YP_971874.1	KEGG: rfr:Rfer_2665 methylation
YP_971875.1	KEGG: rfr:Rfer_2664 methylation
YP_971876.1	KEGG: rfr:Rfer_2663 putative type-4 fimbrial biogenesis PilY1-related signal peptide protein
YP_971877.1	KEGG: rfr:Rfer_2662 putative transmembrane protein
YP_971878.1	KEGG: rfr:Rfer_2661 putative transmembrane protein
YP_971879.1	TIGRFAM: type IV pilus modification protein PilV; KEGG: rfr:Rfer_2660 methylation
YP_971880.1	KEGG: pol:Bpro_2883 riboflavin biosynthesis protein RibD; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase, zinc-binding; bifunctional deaminase-reductase domain protein
YP_971881.1	KEGG: bbr:BB4673 hypothetical protein
YP_971882.1	PFAM: cytochrome c oxidase, subunit I; KEGG: pol:Bpro_1246 cytochrome-c oxidase
YP_971883.1	KEGG: bbr:BB1537 hypothetical protein
YP_971884.1	KEGG: mes:Meso_0468 membrane protein-like
YP_971886.1	KEGG: nwi:Nwi_0998 hypothetical protein
YP_971887.1	PFAM: isochorismatase hydrolase; KEGG: xcb:XC_3751 isochorismatase-like protein
YP_971888.1	KEGG: reu:Reut_A3332 hypothetical protein
YP_971889.1	KEGG: xcb:XC_1691 sensor histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_971890.1	PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: bur:Bcep18194_C6585 cyclopropane-fatty-acyl-phospholipid synthase
YP_971891.1	PFAM: protein of unknown function DUF1295; KEGG: aeh:Mlg_0694 protein of unknown function DUF1295
YP_971892.1	KEGG: mag:amb3242 hypothetical protein
YP_971893.1	KEGG: atc:AGR_C_3604 hypothetical protein
YP_971894.1	TIGRFAM: anti-sigma factor, putative, ChrR family; KEGG: mlo:mlr8089 transcriptional regulator
YP_971895.1	Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response
YP_971896.1	PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mlo:mll8087 hypothetical protein
YP_971897.1	PFAM: protein of unknown function DUF1365; KEGG: mlo:mll8086 hypothetical protein
YP_971898.1	PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: atc:AGR_C_3601 cyclopropane-fatty-acyl-phospholipid synthase
YP_971899.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: mes:Meso_3682 short-chain dehydrogenase/reductase SDR
YP_971900.1	PFAM: Sporulation domain protein; KEGG: rfr:Rfer_3167 sporulation related
YP_971901.1	KEGG: ppu:PP_2462 hypothetical protein
YP_971902.1	KEGG: pol:Bpro_1341 putative oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_971903.1	HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine
YP_971904.1	KEGG: pol:Bpro_1339 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease
YP_971905.1	SMART: protein phosphatase 2C domain protein; KEGG: pol:Bpro_1338 protein serine/threonine phosphatase
YP_971906.1	PFAM: protein of unknown function RIO1; protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: pol:Bpro_1337 serine/threonine protein kinase
YP_971907.1	PFAM: YicC N-terminal domain protein; domain of unknown function DUF1732; KEGG: rfr:Rfer_1626 conserved hypothetical protein 255
YP_971908.1	Essential for recycling GMP and indirectly, cGMP
YP_971909.1	Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
YP_971910.1	KEGG: pol:Bpro_1333 (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase, HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase, HD region
YP_971911.1	TIGRFAM: transcription elongation factor GreB; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: pol:Bpro_1332 GreA/GreB family elongation factor
YP_971914.1	PFAM: peptidase S24, S26A and S26B; KEGG: cya:CYA_1992 peptidase, S24 (LexA) family
YP_971915.1	PFAM: glycoside hydrolase, family 10; KEGG: xom:XOO_4171 secreted xylanase
YP_971916.1	PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: rso:RSc2455 response regulator VSRC transcription regulator protein
YP_971918.1	Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
YP_971919.1	PFAM: Resolvase, N-terminal domain; KEGG: xac:XACb0061 invertase recombinase-like protein
YP_971920.1	KEGG: bte:BTH_I3271 hypothetical protein
YP_971921.1	PFAM: Zonular occludens toxin; KEGG: rme:Rmet_4489 zonular occludens toxin
YP_971922.1	KEGG: mmc:Mmcs_2082 translation initiation factor IF-2
YP_971925.1	KEGG: bps:BPSL3352 hypothetical protein
YP_971926.1	catalyzes the phosphorylation of NAD to NADP
YP_971927.1	TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: rfr:Rfer_1652 DNA repair protein RecN
YP_971928.1	PFAM: uncharacterized P-loop ATPase protein UPF0042; KEGG: pol:Bpro_1300 uncharacterized P-loop ATPase protein UPF0042
YP_971929.1	TIGRFAM: A/G-specific adenine glycosylase; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; KEGG: rfr:Rfer_1654 A/G-specific adenine glycosylase
YP_971930.1	KEGG: pol:Bpro_1298 hypothetical protein
YP_971931.1	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases
YP_971932.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: pol:Bpro_1296 tetratricopeptide TPR_4
YP_971933.1	KEGG: pol:Bpro_1295 putative lipoprotein
YP_971934.1	An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis
YP_971935.1	KEGG: pol:Bpro_1293 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase
YP_971936.1	the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response
YP_971937.1	Enables the recycling of peptidyl-tRNAs produced at termination of translation
YP_971938.1	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: pol:Bpro_1283 4Fe-4S ferredoxin, iron-sulfur binding
YP_971939.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:blr3230 ABC transporter permease protein
YP_971940.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:blr3231 ABC transporter permease protein
YP_971941.1	KEGG: bja:blr3232 ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter-related protein; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase
YP_971942.1	PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: bja:blr3233 ABC transporter ATP-binding protein
YP_971944.1	PFAM: extracellular solute-binding protein, family 5; KEGG: bja:blr3234 ABC transporter substrate-binding protein
YP_971945.1	KEGG: rfr:Rfer_3472 hypothetical protein
YP_971946.1	KEGG: xcb:XC_0241 hypothetical protein
YP_971947.1	PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; KEGG: reu:Reut_B3715 glucarate dehydratase
YP_971948.1	PFAM: uncharacterized protein UPF0065; KEGG: rme:Rmet_0835 uncharacterized protein UPF0065
YP_971949.1	PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: pol:Bpro_3418 transcriptional regulator, LacI family
YP_971950.1	PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: rso:RSc0245 hypothetical/unknown protein
YP_971951.1	KEGG: pen:PSEEN3838 hypothetical protein
YP_971952.1	KEGG: rfr:Rfer_1303 hypothetical protein
YP_971953.1	PFAM: protein of unknown function DUF6, transmembrane; KEGG: rru:Rru_A3034 protein of unknown function DUF6, transmembrane
YP_971954.1	PFAM: BLUF domain protein; KEGG: pol:Bpro_0870 sensors of blue-light using FAD
YP_971955.1	PFAM: GTP cyclohydrolase I; KEGG: pol:Bpro_0869 GTP cyclohydrolase I
YP_971956.1	PFAM: phospholipase D/Transphosphatidylase; KEGG: pol:Bpro_0868 phospholipase D/transphosphatidylase
YP_971957.1	PFAM: Endonuclease/exonuclease/phosphatase; KEGG: rfr:Rfer_1299 endonuclease/exonuclease/phosphatase
YP_971958.1	PFAM: response regulator receiver; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; KEGG: rfr:Rfer_1420 response regulator receiver domain protein
YP_971959.1	PFAM: NUDIX hydrolase; KEGG: rfr:Rfer_1298 NUDIX hydrolase
YP_971960.1	KEGG: xcb:XC_0710 hypothetical protein
YP_971961.1	catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes
YP_971962.1	PFAM: protein of unknown function DUF502; KEGG: pol:Bpro_0865 protein of unknown function DUF502
YP_971963.1	TIGRFAM: putative regulatory protein, FmdB family; KEGG: bcn:Bcen_2115 putative regulatory protein, FmdB
YP_971964.1	an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone; functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis; similar to eukaryotic proteins that exhibit kinase functions
YP_971965.1	KEGG: rfr:Rfer_1293 hypothetical protein
YP_971966.1	PFAM: import inner membrane translocase, subunit Tim44; KEGG: pol:Bpro_0861 import inner membrane translocase, subunit Tim44
YP_971967.1	TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rfr:Rfer_1291 ubiquinone/menaquinone biosynthesis methyltransferase
YP_971968.1	PFAM: protein of unknown function DUF971; KEGG: rfr:Rfer_1290 protein of unknown function DUF971
YP_971969.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: psp:PSPPH_2692 GGDEF domain protein
YP_971970.1	PFAM: histidine triad (HIT) protein; KEGG: rfr:Rfer_1289 histidine triad (HIT) protein
YP_971971.1	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein; FAD linked oxidase domain protein; KEGG: pol:Bpro_0858 FAD linked oxidase-like
YP_971972.1	PFAM: amino acid-binding ACT domain protein; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: pfo:Pfl_5387 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
YP_971973.1	PFAM: extracellular solute-binding protein, family 1; KEGG: pol:Bpro_0857 extracellular solute-binding protein, family 1
YP_971974.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_0856 binding-protein-dependent transport systems inner membrane component
YP_971975.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_0855 binding-protein-dependent transport systems inner membrane component
YP_971976.1	PFAM: ABC transporter-related protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rfr:Rfer_1284 ABC transporter-related protein
YP_971977.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ret:RHE_CH03261 putative bleomycin resistance protein
YP_971978.1	PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: pol:Bpro_0853 glycerophosphodiester phosphodiesterase
YP_971979.1	PFAM: MscS Mechanosensitive ion channel; KEGG: bbr:BB1859 hypothetical protein
YP_971980.1	PFAM: uncharacterized protein UPF0065; KEGG: pol:Bpro_3470 uncharacterized protein UPF0065
YP_971981.1	PFAM: Integrase, catalytic region; KEGG: bpa:BPP2353 IS1002 transposase
YP_971982.1	PFAM: Integrase, catalytic region; KEGG: eba:ebA5932 transposase
YP_971983.1	KEGG: eba:ebA5933 transposition helper protein
YP_971984.1	KEGG: rfr:Rfer_1282 hypothetical protein
YP_971985.1	catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins
YP_971986.1	recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2
YP_971987.1	TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; Methyltransferase type 12; KEGG: pol:Bpro_0849 modification methylase, HemK family
YP_971988.1	KEGG: bpm:BURPS1710b_3606 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
YP_971989.1	PFAM: AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: bxe:Bxe_A4335 putative ATP-dependent protease La
YP_971990.1	PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: cvi:CV4242 hypothetical protein
YP_971991.1	PFAM: Lytic transglycosylase, catalytic; KEGG: pol:Bpro_0832 lytic transglycosylase, catalytic
YP_971992.1	catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro)
YP_971993.1	hydrolyzes diadenosine polyphosphate
YP_971994.1	catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis
YP_971995.1	essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication
YP_971996.1	involved in the peptidyltransferase reaction during translation
YP_971997.1	PFAM: ribosomal protein L21; KEGG: pol:Bpro_0839 ribosomal protein L21
YP_971998.1	PFAM: Polyprenyl synthetase; KEGG: pol:Bpro_0840 trans-hexaprenyltranstransferase
YP_971999.1	KEGG: rme:Rmet_5222 peptidase M20D, amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein
YP_972000.1	PFAM: uncharacterized protein UPF0065; KEGG: rme:Rmet_5221 twin-arginine translocation pathway signal
YP_972001.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rme:Rmet_5220 transcriptional regulator, LysR family
YP_972002.1	KEGG: rfr:Rfer_2902 type II secretion system protein E; TIGRFAM: type IV-A pilus assembly ATPase PilB; PFAM: type II secretion system protein E; General secretory system II, protein E domain protein; SMART: AAA ATPase
YP_972003.1	PFAM: type II secretion system protein; KEGG: pol:Bpro_0842 type II secretion system protein
YP_972004.1	PFAM: peptidase A24A, prepilin type IV; peptidase A24A domain protein; KEGG: rfr:Rfer_2904 prepilin peptidase
YP_972005.1	KEGG: pol:Bpro_0844 dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase
YP_972006.1	PFAM: protein of unknown function DUF1342; KEGG: pol:Bpro_0845 protein of unknown function DUF1342
YP_972007.1	PFAM: protein of unknown function DUF329; KEGG: pol:Bpro_0846 protein of unknown function DUF329
YP_972008.1	PFAM: NUDIX hydrolase; KEGG: rfr:Rfer_2908 NUDIX hydrolase
YP_972009.1	PFAM: protein of unknown function DUF815; KEGG: pol:Bpro_0830 protein of unknown function DUF815
YP_972010.1	bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate
YP_972011.1	functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins
YP_972012.1	PFAM: peptidase M23B; KEGG: rfr:Rfer_2912 peptidase M23B
YP_972013.1	KEGG: rfr:Rfer_2913 hypothetical protein
YP_972014.1	PFAM: Stringent starvation protein B; KEGG: pol:Bpro_0825 stringent starvation protein B
YP_972015.1	PFAM: glutaredoxin; glutathione S-transferase, N-terminal domain; KEGG: pol:Bpro_0824 glutathione S-transferase-like
YP_972016.1	PFAM: cytochrome c1; KEGG: pol:Bpro_0823 cytochrome c1
YP_972017.1	PFAM: Cytochrome b/b6, N-terminal domain; KEGG: pol:Bpro_0822 cytochrome b/b6-like
YP_972018.1	KEGG: rfr:Rfer_2964 ubiquinol-cytochrome c reductase, iron-sulfur subunit; TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein
YP_972019.1	homopentamer; channel that opens in response to pressure or hypoosmotic shock
YP_972020.1	KEGG: rfr:Rfer_2962 4-hydroxythreonine-4-phosphate dehydrogenase; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA
YP_972021.1	KEGG: pol:Bpro_1015 lipoprotein releasing system, ATP-binding protein; TIGRFAM: lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter-related protein; SMART: AAA ATPase
YP_972022.1	TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: rfr:Rfer_3232 lipoprotein releasing system, transmembrane protein, LolC/E family
YP_972023.1	KEGG: rfr:Rfer_3233 hypothetical protein
YP_972024.1	TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase, RecJ domain protein; phosphoesterase, DHHA1; KEGG: rfr:Rfer_3234 single-stranded-DNA-specific exonuclease RecJ
YP_972026.1	PFAM: Methyltransferase type 12; KEGG: psb:Psyr_0118 hypothetical protein
YP_972027.1	PFAM: aminotransferase, class I and II; KEGG: psb:Psyr_0117 aminotransferase, class I and II
YP_972028.1	PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA2224 putative transporter
YP_972029.1	PFAM: PHP C-terminal domain protein; SMART: phosphoesterase PHP domain protein; KEGG: pol:Bpro_1005 PHP-like
YP_972030.1	TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC, N-terminal domain; KEGG: pol:Bpro_1003 SUA5/YciO/YrdC/YwlC
YP_972031.1	PFAM: peptidase M50; KEGG: rfr:Rfer_3239 peptidase M50
YP_972032.1	catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_972033.1	TIGRFAM: YD repeat protein; PFAM: RHS protein; YD repeat-containing protein; KEGG: ecj:JW3566 rhsA element core protein RshA
YP_972034.1	KEGG: pfl:PFL_2193 hypothetical protein
YP_972035.1	KEGG: nmu:Nmul_A2305 hypothetical protein
YP_972036.1	KEGG: psp:PSPPH_A0106 hypothetical conserved protein, putative
YP_972037.1	KEGG: psp:PSPPH_A0107 SanC, putative
YP_972038.1	PFAM: aminotransferase class-III; KEGG: psp:PSPPH_A0108 adenosylmethionine-8-amino-7-oxononanoate aminotransferase
YP_972039.1	KEGG: psp:PSPPH_A0109 sulfotransferase, putative
YP_972040.1	PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: psp:PSPPH_A0110 hypothetical protein
YP_972041.1	KEGG: nmu:Nmul_A2305 hypothetical protein
YP_972043.1	PFAM: 4'-phosphopantetheinyl transferase; KEGG: nmu:Nmul_A1833 4'-phosphopantetheinyl transferase
YP_972044.1	KEGG: nmu:Nmul_A1825 L-lysine 6-monooxygenase (NADPH)
YP_972045.1	KEGG: pfl:PFL_4091 pyoverdine ABC export system, permease/ATP-binding protein; TIGRFAM: cyclic peptide transporter; PFAM: ABC transporter-related protein; SMART: AAA ATPase
YP_972046.1	KEGG: pst:PSPTO_1674 ferric iron reductase protein FhuF
YP_972047.1	KEGG: bma:BMA1177 hypothetical protein
YP_972048.1	KEGG: nmu:Nmul_A1824 hypothetical protein
YP_972049.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: xac:XAC2185 ferrichrome-iron receptor
YP_972050.1	TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; Thioesterase; condensation domain protein; phosphopantetheine-binding; KEGG: psb:Psyr_1960 non-ribosomal peptide synthase:amino acid adenylation
YP_972051.1	TIGRFAM: non-ribosomal peptide synthase; amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: nmu:Nmul_A1829 amino acid adenylation
YP_972052.1	TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: pen:PSEEN3230 pyoverdine sidechain peptide synthetase
YP_972053.1	PFAM: beta-ketoacyl synthase; acyl transferase domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR; KEGG: nmu:Nmul_A1831 beta-ketoacyl synthase
YP_972054.1	TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: nmu:Nmul_A1832 amino acid adenylation
YP_972055.1	PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: ppu:PP_4222 SyrP protein, putative
YP_972056.1	PFAM: Thioesterase; KEGG: nmu:Nmul_A1834 thioesterase
YP_972057.1	PFAM: MbtH domain protein; KEGG: nmu:Nmul_A1835 MbtH-like protein
YP_972058.1	PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: nmu:Nmul_A1839 sigma-24 (FecI-like)
YP_972059.1	KEGG: bxe:Bxe_A2125 hypothetical protein
YP_972060.1	KEGG: bte:BTH_II1320 putative DnaK-related protein (molecular chaperone)
YP_972061.1	KEGG: reu:Reut_A1753 putative chaperone heat-shock protein
YP_972062.1	KEGG: ppu:PP_5395 hypothetical protein
YP_972064.1	KEGG: pol:Bpro_0956 hypothetical protein
YP_972065.1	KEGG: ppu:PP_5399 hypothetical protein
YP_972066.1	KEGG: mth:MTH27 adenylate kinase
YP_972067.1	PFAM: Cl- channel, voltage-gated family protein; KEGG: rso:RS01992 hypothetical transmembrane protein
YP_972072.1	TIGRFAM: YD repeat protein; PFAM: RHS protein; YD repeat-containing protein; KEGG: ecs:ECs0560 RhsD
YP_972073.1	PFAM: Rhs element Vgr protein; KEGG: bps:BPSS2093 hypothetical protein
YP_972074.1	PFAM: peptidase M16 domain protein; KEGG: fal:FRAAL5752 putative zinc protease
YP_972075.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: fra:Francci3_3522 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine
YP_972076.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbr:BB0689 putative permease component of ABC transporter
YP_972077.1	PFAM: extracellular solute-binding protein, family 3; KEGG: fal:FRAAL5714 putative glutamate binding protein of ABC transporter system
YP_972078.1	TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pol:Bpro_0056 haloacid dehalogenase, type II
YP_972079.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: bxe:Bxe_B1490 D-isomer specific 2-hydroxyacid dehydrogenase
YP_972080.1	PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; KEGG: bja:bll0378 dihydroxy-acid dehydratase
YP_972081.1	KEGG: pat:Patl_2583 hypothetical protein
YP_972082.1	KEGG: pat:Patl_2582 hypothetical protein
YP_972083.1	KEGG: pat:Patl_2581 diguanylate cyclase with PAS/PAC sensor; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_972084.1	PFAM: Integrase, catalytic region; KEGG: eba:ebA5932 transposase
YP_972085.1	KEGG: eba:ebA5933 transposition helper protein
YP_972086.1	PFAM: transposase, IS4 family protein; KEGG: bxe:Bxe_C0489 putative transposase IS4
YP_972087.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pol:Bpro_0448 glyoxalase/bleomycin resistance protein/dioxygenase
YP_972088.1	catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_972089.1	catalyzes the formation of 2-oxobutanoate from L-threonine
YP_972090.1	PFAM: CBS domain containing protein; KEGG: rfr:Rfer_1632 CBS domain containing membrane protein
YP_972091.1	PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: rme:Rmet_4765 protein of unknown function DUF21
YP_972092.1	catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway
YP_972093.1	PFAM: peptidylprolyl isomerase, FKBP-type; KEGG: pol:Bpro_0950 peptidylprolyl isomerase, FKBP-type
YP_972094.1	PFAM: DNA repair protein RadC; KEGG: rfr:Rfer_3252 DNA repair protein RadC
YP_972095.1	KEGG: ssp:SSP1055 hypothetical protein
YP_972096.1	PFAM: Cupin 2, conserved barrel domain protein; KEGG: ppu:PP_2071 hypothetical protein
YP_972097.1	PFAM: Smr protein/MutS2; KEGG: pol:Bpro_0947 Smr protein/MutS2
YP_972098.1	PFAM: ATP-binding region, ATPase domain protein; KEGG: rme:Rmet_5129 periplasmic sensor signal transduction histidine kinase
YP_972099.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mag:amb0189 response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
YP_972100.1	PFAM: Propeptide, PepSY amd peptidase M4; KEGG: nha:Nham_1884 propeptide, PepSY amd peptidase M4
YP_972101.1	KEGG: xcb:XC_0025 hypothetical protein
YP_972102.1	PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: rme:Rmet_0572 5'-nucleotidase-like protein
YP_972103.1	PFAM: Rhs element Vgr protein; Gp5 domain protein; KEGG: bps:BPSS2093 hypothetical protein
YP_972104.1	KEGG: hch:HCH_05703 hypothetical protein
YP_972106.1	KEGG: gsu:GSU3186 hypothetical protein
YP_972107.1	KEGG: pfl:PFL_3001 3-oxoacyl-(acyl carrier protein) synthase
YP_972108.1	TIGRFAM: YD repeat protein; PFAM: YD repeat-containing protein; KEGG: bxe:Bxe_A4426 rhs family protein
YP_972109.1	KEGG: rso:RSp0990 probable TIS1421-transposase orfA protein
YP_972110.1	PFAM: transposase, IS4 family protein; KEGG: cvi:CV0957 TIS1421-transposase protein B
YP_972111.1	PFAM: Integrase, catalytic region; KEGG: eba:ebA5932 transposase
YP_972112.1	KEGG: eba:ebA5933 transposition helper protein
YP_972113.1	KEGG: psp:PSPPH_4833 rhs family protein
YP_972114.1	KEGG: pen:PSEEN1732 hypothetical protein
YP_972115.1	TIGRFAM: YD repeat protein; PFAM: YD repeat-containing protein; KEGG: bur:Bcep18194_B1826 rhs family protein
YP_972116.1	KEGG: eba:ebA5933 transposition helper protein
YP_972117.1	PFAM: Integrase, catalytic region; KEGG: eba:ebA5932 transposase
YP_972119.1	PFAM: phosphopantetheine-binding; KEGG: bxe:Bxe_C0425 hypothetical protein
YP_972120.1	PFAM: 3-oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal domain protein; KEGG: bxe:Bxe_C0424 hypothetical protein
YP_972121.1	PFAM: 3-oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal domain protein; 3-oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: bxe:Bxe_C0423 hypothetical protein
YP_972122.1	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: sru:SRU_2717 putative multidrug resistance protein NorM
YP_972123.1	PFAM: AMP-dependent synthetase and ligase; KEGG: bpm:BURPS1710b_A0616 AMP-binding enzyme domain protein
YP_972124.1	PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: bxe:Bxe_C0421 putative Orn/DAP/Arg decarboxylase
YP_972125.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: bxe:Bxe_C0420 putative acyl-CoA dehydrogenase
YP_972126.1	KEGG: bxe:Bxe_C0419 hypothetical protein
YP_972127.1	KEGG: bur:Bcep18194_C7424 hypothetical protein
YP_972128.1	PFAM: 3-oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal domain protein; KEGG: bxe:Bxe_C0417 hypothetical protein
YP_972129.1	PFAM: regulatory protein, LuxR; Autoinducer-binding domain protein; KEGG: bte:BTH_II0805 transcriptional regulator, LuxR family
YP_972130.1	PFAM: autoinducer synthesis protein; KEGG: mlo:mlr6385 conjugation factor synthase TraI
YP_972131.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: bxe:Bxe_C0426 putative acyl-CoA dehydrogenase
YP_972132.1	PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: bcn:Bcen_5729 GntR-like
YP_972133.1	PFAM: protein of unknown function DUF1185; KEGG: bxe:Bxe_C0437 hypothetical protein
YP_972134.1	PFAM: Amidase; KEGG: bxe:Bxe_C0436 putative amidase
YP_972135.1	KEGG: bxe:Bxe_C0435 ABC branched chain amino acid family transporter, periplasmic ligand binding protein
YP_972136.1	PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: bxe:Bxe_C0434 ABC branched chain amino acid family transporter, ATPase subunit
YP_972137.1	PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: bxe:Bxe_C0433 ABC branched chain amino acid family transporter, ATPase subunit
YP_972138.1	PFAM: inner-membrane translocator; KEGG: bxe:Bxe_C0432 ABC branched chain amino acid family transporter, inner membrane subunit
YP_972139.1	PFAM: inner-membrane translocator; KEGG: bxe:Bxe_C0431 ABC branched chain amino acid family transporter, inner membrane subunit
YP_972140.1	PFAM: Amidase; KEGG: bxe:Bxe_C0428 putative amidase
YP_972141.1	TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: bcn:Bcen_0950 methylmalonate-semialdehyde dehydrogenase
YP_972142.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bcn:Bcen_0951 transcriptional regulator, LysR family
YP_972143.1	PFAM: protein of unknown function DUF214; KEGG: pol:Bpro_0944 protein of unknown function DUF214
YP_972144.1	KEGG: bcn:Bcen_5665 hypothetical protein
YP_972145.1	TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase, subunit FdhD; KEGG: rso:RSp1050 probable formate dehydrogenase associated protein (fdhD protein)
YP_972146.1	TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: rso:RS02385 putative formate dehydrogenase oxidoreductase protein
YP_972147.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: bte:BTH_II1684 methyl-accepting chemotaxis protein I
YP_972148.1	PFAM: major facilitator superfamily MFS_1; KEGG: xcb:XC_1760 integral membrane transporter
YP_972149.1	PFAM: protein of unknown function DUF59; KEGG: pol:Bpro_0931 putative iron sulfur binding protein
YP_972150.1	PFAM: restriction endonuclease; KEGG: rfr:Rfer_1543 hypothetical protein
YP_972151.1	PFAM: Patatin; KEGG: rfr:Rfer_3273 patatin
YP_972152.1	catalyzes the formation of acetate from pyruvate
YP_972153.1	methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content
YP_972155.1	PFAM: protein of unknown function DUF161; KEGG: ret:RHE_CH00545 hypothetical protein
YP_972156.1	KEGG: pol:Bpro_0908 putative lipoprotein
YP_972157.1	KEGG: pol:Bpro_0907 hypothetical protein
YP_972158.1	PFAM: chromosome segregation and condensation protein ScpA; KEGG: rfr:Rfer_3030 chromosome segregation and condensation protein ScpA
YP_972159.1	KEGG: pol:Bpro_0905 L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase
YP_972160.1	TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; KEGG: pol:Bpro_0900 adenosylmethionine-8-amino-7-oxononanoate aminotransferase
YP_972161.1	TIGRFAM: dethiobiotin synthase; KEGG: pol:Bpro_0899 dethiobiotin synthase
YP_972162.1	KEGG: pol:Bpro_0898 8-amino-7-oxononanoate synthase; TIGRFAM: 8-amino-7-oxononanoate synthase; PFAM: aminotransferase, class I and II
YP_972163.1	KEGG: pol:Bpro_1494 hypothetical protein
YP_972164.1	PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: pol:Bpro_1495 6-pyruvoyl tetrahydropterin synthase and hypothetical protein
YP_972165.1	PFAM: 5-carboxymethyl-2-hydroxymuconate isomerase; KEGG: pen:PSEEN4037 5-carboxymethyl-2-hydroxymuconate delta isomerase
YP_972166.1	KEGG: rso:RSc1475 probable transmembrane protein
YP_972167.1	KEGG: rso:RSc1474 hypothetical protein
YP_972168.1	TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Anthranilate synthase component I and chorismate binding protein; KEGG: pol:Bpro_0904 para-aminobenzoate synthase, component I
YP_972169.1	3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate
YP_972170.1	KEGG: pol:Bpro_0902 nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase
YP_972171.1	catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate
YP_972172.1	catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine
YP_972173.1	catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate
YP_972174.1	molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA
YP_972175.1	TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin; KEGG: rfr:Rfer_1311 glutaredoxin, GrxC
YP_972176.1	PFAM: Rhodanese domain protein; KEGG: pol:Bpro_0887 rhodanese-like
YP_972177.1	2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate
YP_972178.1	KEGG: pol:Bpro_0885 carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41
YP_972179.1	PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: rfr:Rfer_1307 UBA/ThiF-type NAD/FAD binding protein
YP_972180.1	PFAM: response regulator receiver; KEGG: pol:Bpro_0882 response regulator receiver domain protein (CheY-like)
YP_972181.1	PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: pol:Bpro_0881 two component transcriptional regulator, LuxR family
YP_972182.1	PFAM: ATP-binding region, ATPase domain protein; CHASE3 domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: pol:Bpro_0880 multi-sensor signal transduction histidine kinase
YP_972183.1	PFAM: protein of unknown function DUF1328; KEGG: pol:Bpro_0879 protein of unknown function DUF1328
YP_972184.1	KEGG: pol:Bpro_0878 hypothetical protein
YP_972185.1	PFAM: Rubrerythrin; Ferritin, Dps family protein; KEGG: reu:Reut_A2901 rubrerythrin:ferritin and Dps
YP_972186.1	PFAM: transport-associated; SMART: Transport-associated and nodulation region, bacteria; KEGG: pol:Bpro_0875 transport-associated
YP_972187.1	KEGG: hch:HCH_03595 hypothetical protein
YP_972188.1	KEGG: rfr:Rfer_1667 coenzyme A biosynthesis protein; TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain; PFAM: cytidylyltransferase
YP_972189.1	TIGRFAM: putative methyltransferase; PFAM: conserved hypothetical protein 95; KEGG: rfr:Rfer_1668 conserved hypothetical protein 95
YP_972190.1	PFAM: peptidase M16 domain protein; KEGG: rfr:Rfer_1670 peptidase M16-like
YP_972191.1	PFAM: peptidase M16 domain protein; KEGG: rfr:Rfer_1671 peptidase M16-like
YP_972193.1	KEGG: pol:Bpro_1278 signal recognition particle-docking protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54, G- domain; GTP-binding signal recognition particle SRP54, helical bundle; SMART: AAA ATPase
YP_972194.1	PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bpm:BURPS1710b_A2377 fumarylacetoacetate (FAA) hydrolase family protein
YP_972195.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_B2957 putative short-chain dehydrogenase/reductase
YP_972196.1	transports degraded pectin products into the bacterial cell
YP_972197.1	PFAM: Hemerythrin HHE cation binding domain protein; KEGG: tbd:Tbd_2248 hypothetical protein
YP_972198.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rfr:Rfer_2225 methyl-accepting chemotaxis sensory transducer
YP_972199.1	PFAM: helix-turn-helix- domain containing protein, AraC type; ThiJ/PfpI domain protein; KEGG: pfl:PFL_4108 transcriptional regulator DarR
YP_972200.1	PFAM: ThiJ/PfpI domain protein; KEGG: rpb:RPB_3031 ThiJ/PfpI
YP_972201.1	PFAM: uncharacterized protein UPF0065; KEGG: pol:Bpro_0579 uncharacterized protein UPF0065
YP_972202.1	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: xcb:XC_3039 hypothetical protein
YP_972203.1	PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: bbr:BB2602 putative multiple antibiotic resistance protein
YP_972204.1	KEGG: shm:Shewmr7_2737 hypothetical protein
YP_972205.1	TIGRFAM: phosphonopyruvate hydrolase; KEGG: bbr:BB1046 phosphoenolpyruvate phosphomutase
YP_972206.1	PFAM: aminotransferase, class I and II; KEGG: bbr:BB1045 aspartate aminotransferase
YP_972207.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbr:BB1044 inner membrane component of ABC transporter
YP_972208.1	PFAM: ABC transporter-related protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bbr:BB1043 ATP-binding component of ABC transporter
YP_972209.1	PFAM: extracellular solute-binding protein, family 1; KEGG: bbr:BB1042 extracellular solute-binding protein
YP_972210.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bbr:BB1041 LysR-family transcriptional regulator
YP_972211.1	TIGRFAM: RNA polymerase sigma factor RpoH; PFAM: sigma-70 region 2 domain protein; KEGG: rfr:Rfer_1692 sigma 32 (RpoH)
YP_972212.1	PFAM: uncharacterized protein UPF0065; KEGG: rfr:Rfer_1691 uncharacterized protein UPF0065
YP_972213.1	KEGG: cvi:CV3077 hypothetical protein
YP_972214.1	PFAM: cyclic nucleotide-binding; KEGG: dvu:DVU2547 transcriptional regulator, putative
YP_972215.1	PFAM: electron transport protein SCO1/SenC; KEGG: rfr:Rfer_1690 electron transport protein SCO1/SenC
YP_972216.1	converts protoheme IX and farnesyl diphosphate to heme O
YP_972217.1	PFAM: cytochrome oxidase assembly; KEGG: rfr:Rfer_1688 cytochrome oxidase assembly
YP_972218.1	KEGG: rfr:Rfer_1687 hypothetical protein
YP_972219.1	KEGG: rfr:Rfer_1686 hypothetical protein
YP_972220.1	PFAM: cytochrome c oxidase, subunit III; KEGG: pol:Bpro_1249 cytochrome c oxidase, subunit III
YP_972221.1	KEGG: rfr:Rfer_1683 putative transmembrane protein
YP_972222.1	involved in the insertion of copper into subunit I of cytochrome C oxidase
YP_972223.1	PFAM: cytochrome c oxidase, subunit I; KEGG: rfr:Rfer_1681 cytochrome-c oxidase
YP_972224.1	PFAM: cytochrome c oxidase, subunit II; cytochrome c, class I; cytochrome C oxidase subunit II, transmembrane region; KEGG: pol:Bpro_1245 cytochrome c oxidase, subunit II
YP_972225.1	KEGG: pol:Bpro_1243 biotin synthesis protein BioC
YP_972226.1	KEGG: rfr:Rfer_1678 ComF family protein
YP_972227.1	PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: pol:Bpro_1241 RNA methyltransferase TrmH, group 2
YP_972228.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: pol:Bpro_4290 transcriptional regulator, LysR family
YP_972230.1	PFAM: MaoC domain protein dehydratase; KEGG: pol:Bpro_1240 MaoC-like dehydratase
YP_972231.1	PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: pol:Bpro_1239 cobyrinic acid a,c-diamide synthase
YP_972232.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pol:Bpro_2660 lysine exporter protein (LysE/YggA)
YP_972233.1	transport system that facilitates potassium-efflux
YP_972234.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: aci:ACIAD2049 putative ferric siderophore receptor protein
YP_972235.1	PFAM: PepSY-associated TM helix domain protein; KEGG: rpb:RPB_3524 PepSY-associated TM helix
YP_972238.1	PFAM: cytochrome B561; KEGG: psb:Psyr_3279 cytochrome b561, bacterial
YP_972239.1	PFAM: regulatory protein, MarR; KEGG: bbr:BB1771 MarR-family transcriptional regulator
YP_972240.1	TIGRFAM: PAS sensor protein; PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; PAS fold-3 domain protein; KEGG: rme:Rmet_3682 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor
YP_972241.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: rme:Rmet_4993 major facilitator superfamily MFS_1
YP_972242.1	PFAM: cytochrome c, class I; KEGG: bbr:BB1776 putative cytochrome
YP_972243.1	PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: ppu:PP_3947 isoquinoline 1-oxidoreductase, putative
YP_972244.1	PFAM: monooxygenase, FAD-binding; KEGG: bpe:BP1954 putative monooxygenase
YP_972245.1	PFAM: Asp/Glu racemase; KEGG: reu:Reut_A2514 Asp/Glu racemase
YP_972246.1	PFAM: alpha/beta hydrolase fold; KEGG: bbr:BB1780 probable alpha/beta hydrolase
YP_972247.1	KEGG: reu:Reut_A2512 hypothetical protein
YP_972248.1	PFAM: isochorismatase hydrolase; KEGG: bpe:BP1958 putative isochorismatase
YP_972249.1	PFAM: aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: bpa:BPP2332 probable aldehyde dehydrogenase
YP_972250.1	PFAM: protein of unknown function DUF182; KEGG: bbr:BB2416 hypothetical protein
YP_972251.1	PFAM: regulatory protein, MarR; KEGG: xcv:XCV0138 putative transcriptional regulator, MarR family
YP_972252.1	PFAM: NAD-dependent epimerase/dehydratase; TrkA-N domain protein; NmrA family protein; KEGG: xcv:XCV0137 hypothetical protein
YP_972253.1	PFAM: glycoside hydrolase 15-related; KEGG: psb:Psyr_2298 glycoside hydrolase, family 15
YP_972254.1	PFAM: uncharacterized protein UPF0065; KEGG: rme:Rmet_3671 uncharacterized protein UPF0065
YP_972255.1	PFAM: Muconolactone delta-isomerase; KEGG: rme:Rmet_4677 muconolactone delta-isomerase
YP_972256.1	PFAM: short chain fatty acid transporter; KEGG: rme:Rmet_4680 short chain fatty acid transporter
YP_972257.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: reu:Reut_C6281 NAD-dependent epimerase/dehydratase:short-chain dehydrogenase/reductase SDR
YP_972258.1	unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity
YP_972259.1	KEGG: reu:Reut_B3888 hypothetical protein
YP_972260.1	TIGRFAM: 3-oxoadipate enol-lactonase; PFAM: alpha/beta hydrolase fold; KEGG: pen:PSEEN1168 3-oxoadipate enol-lactonase II (beta-ketoadipate enol-lactone hydrolase II)
YP_972261.1	KEGG: rfr:Rfer_1034 beta-ketoadipyl CoA thiolase; TIGRFAM: acetyl-CoA acetyltransferase; beta-ketoadipyl CoA thiolase; PFAM: Thiolase
YP_972262.1	KEGG: rfr:Rfer_1035 3-oxoacid CoA-transferase, subunit B; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase
YP_972263.1	KEGG: rfr:Rfer_1036 3-oxoacid CoA-transferase, subunit A; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase
YP_972264.1	TIGRFAM: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family; PFAM: regulatory protein, IclR; KEGG: pol:Bpro_1228 transcriptional regulator, IclR family
YP_972266.1	KEGG: xoo:XOO0097 hypothetical protein
YP_972267.1	KEGG: pol:Bpro_1226 hypothetical protein
YP_972268.1	PFAM: cytochrome c, class I; KEGG: pol:Bpro_1223 cytochrome c, class I
YP_972269.1	PFAM: AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: pol:Bpro_1222 ATPase associated with various cellular activities, AAA_5
YP_972270.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pol:Bpro_1220 hypothetical protein
YP_972271.1	KEGG: rfr:Rfer_1591 hypothetical protein
YP_972272.1	PFAM: surface antigen (D15); KEGG: rfr:Rfer_1592 surface antigen (D15)
YP_972273.1	PFAM: protein of unknown function DUF490; KEGG: rfr:Rfer_1593 protein of unknown function DUF490
YP_972276.1	PFAM: protein of unknown function DUF1504; KEGG: pol:Bpro_2221 protein of unknown function DUF1504
YP_972278.1	KEGG: rso:RS01656 hypothetical protein
YP_972279.1	PFAM: phospholipase D/Transphosphatidylase; KEGG: ade:Adeh_2057 phospholipase D/transphosphatidylase
YP_972280.1	PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; KEGG: rfr:Rfer_3821 periplasmic sensor signal transduction histidine kinase
YP_972281.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rfr:Rfer_3820 two component transcriptional regulator, winged helix family
YP_972282.1	TIGRFAM: protease Do; PFAM: peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: rfr:Rfer_3822 peptidase S1C, Do
YP_972283.1	KEGG: bxe:Bxe_A2876 hypothetical protein
YP_972284.1	KEGG: bxe:Bxe_A2877 hypothetical protein
YP_972285.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bxe:Bxe_A1399 putative lactoylglutathione lyase
YP_972286.1	PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: bxe:Bxe_A2880 transcriptional regulator, AraC family
YP_972287.1	KEGG: hch:HCH_02813 predicted helicase; TIGRFAM: CRISPR-associated helicase Cas3; PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: DEAD-like helicases-like
YP_972288.1	KEGG: psb:Psyr_2359 hypothetical protein
YP_972290.1	PFAM: luciferase family protein; KEGG: dar:Daro_1097 luciferase-like
YP_972291.1	TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; KEGG: rfr:Rfer_0544 general secretion pathway protein F
YP_972292.1	PFAM: 5-nucleotidase; KEGG: pol:Bpro_0738 5-nucleotidase
YP_972293.1	PFAM: Calcium-binding EF-hand-containing protein; KEGG: gbe:GbCGDNIH1_1190 hypothetical secreted protein
YP_972294.1	KEGG: rfr:Rfer_0823 hypothetical protein
YP_972295.1	KEGG: reu:Reut_A2583 hypothetical protein
YP_972296.1	PFAM: ABC transporter, transmembrane region; ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_1417 ABC transporter-related protein
YP_972297.1	catalyze the formation of cyanophycin which may act to store excess nitrogen
YP_972298.1	catalyze the formation of cyanophycin which may act to store excess nitrogen
YP_972299.1	PFAM: CreA family protein; KEGG: nmu:Nmul_A1715 CreA
YP_972300.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rme:Rmet_4033 transcriptional regulator, LysR family
YP_972301.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: reu:Reut_B3707 L-carnitine dehydratase/bile acid-inducible protein F
YP_972302.1	PFAM: uncharacterized protein UPF0065; KEGG: reu:Reut_B3705 hypothetical protein
YP_972303.1	PFAM: DSBA oxidoreductase; KEGG: pol:Bpro_3008 DsbA oxidoreductase
YP_972304.1	PFAM: 2OG-Fe(II) oxygenase; KEGG: rso:RSc2568 probable alkylated DNA repair protein
YP_972305.1	KEGG: ade:Adeh_0244 LigA
YP_972306.1	PFAM: transglutaminase domain protein; KEGG: dar:Daro_0510 transglutaminase-like
YP_972307.1	PFAM: Catalase domain protein; KEGG: xac:XAC1211 catalase
YP_972308.1	PFAM: response regulator receiver; KEGG: bxe:Bxe_A1835 PAS/PAC sensor hybrid histidine kinase
YP_972309.1	PFAM: response regulator receiver; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; KEGG: xac:XAC1279 two-component system regulatory protein
YP_972310.1	PFAM: CheB methylesterase; KEGG: xcv:XCV1330 chemotaxis response regulator protein-glutamate methylesterase
YP_972311.1	PFAM: MCP methyltransferase, CheR-type; KEGG: xcb:XC_3058 chemotaxis protein
YP_972312.1	PFAM: response regulator receiver; GAF domain protein; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; CHASE3 domain protein; KEGG: ppu:PP_3761 sensor histidine kinase/response regulator
YP_972313.1	KEGG: xcb:XC_1758 hypothetical protein
YP_972314.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase, HAMP region domain protein; KEGG: pfo:Pfl_3550 putative diguanylate cyclase (GGDEF domain)
YP_972315.1	KEGG: ppu:PP_0194 alginate regulatory protein AlgP
YP_972316.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: mfa:Mfla_2387 TonB-dependent siderophore receptor
YP_972317.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mfa:Mfla_2389 binding-protein-dependent transport systems inner membrane component
YP_972318.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mfa:Mfla_2390 binding-protein-dependent transport systems inner membrane component
YP_972319.1	PFAM: ABC transporter-related protein; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; KEGG: mfa:Mfla_2391 ABC transporter-related protein
YP_972320.1	KEGG: nmu:Nmul_A2304 ATP-dependent DNA helicase, RecQ family; TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like
YP_972321.1	KEGG: atc:AGR_L_2371 hypothetical protein
YP_972323.1	TIGRFAM: YD repeat protein; PFAM: RHS protein; YD repeat-containing protein; KEGG: ecs:ECs2061 RhsE
YP_972324.1	PFAM: Rhs element Vgr protein; Gp5 domain protein; KEGG: bps:BPSS2093 hypothetical protein
YP_972325.1	KEGG: pfo:Pfl_2095 hypothetical protein
YP_972326.1	PFAM: protein of unknown function DUF182; KEGG: pol:Bpro_0572 protein of unknown function DUF182
YP_972327.1	PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: xcv:XCV1214 xanthine dehydrogenase, molybdenum-binding subunit
YP_972328.1	PFAM: molybdopterin dehydrogenase, FAD-binding; KEGG: xcv:XCV1215 putative xanthine dehydrogenase, FAD-binding subunit
YP_972329.1	PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: xac:XAC1189 ferredoxin
YP_972330.1	KEGG: ppu:PP_2483 hypothetical protein
YP_972331.1	PFAM: alpha/beta hydrolase fold; KEGG: mag:amb2852 glutamate decarboxylase and related PLP-dependent protein
YP_972332.1	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ade:Adeh_1320 zinc-binding alcohol dehydrogenase
YP_972334.1	PFAM: nitroreductase; KEGG: rfr:Rfer_4012 nitroreductase
YP_972335.1	KEGG: reu:Reut_A1851 hypothetical protein
YP_972336.1	PFAM: NUDIX hydrolase; KEGG: ret:RHE_PF00027 probable DNA hydrolase protein, MutT/NUDIX protein family
YP_972337.1	PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: mxa:MXAN_2236 putative 5'-nucleotidase
YP_972338.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: cvi:CV0764 probable transcriptional regulator, LysR family
YP_972339.1	PFAM: conserved hypothetical protein 698; KEGG: pol:Bpro_1159 conserved hypothetical protein 698
YP_972340.1	PFAM: Integrase, catalytic region; KEGG: bpa:BPP1897 IS1002 transposase
YP_972341.1	KEGG: bba:Bd0303 regulator of nucleoside diphosphate kinase
YP_972342.1	TIGRFAM: esterase, PHB depolymerase family; KEGG: rfr:Rfer_2576 esterase, PHB depolymerase
YP_972343.1	KEGG: rfr:Rfer_2577 hypothetical protein
YP_972344.1	PFAM: ribonuclease BN; KEGG: nmu:Nmul_A2153 ribonuclease BN, putative
YP_972345.1	PFAM: CHAD domain containing protein; adenylate cyclase; KEGG: bbr:BB0944 hypothetical protein
YP_972346.1	KEGG: cvi:CV0167 probable lysophospholipase L2
YP_972347.1	KEGG: rso:RS05318 hypothetical protein
YP_972348.1	KEGG: vch:VC1582 hypothetical protein
YP_972349.1	Catalyzes the transfer of electrons from NADH to ubiquinone
YP_972350.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: cvi:CV3222 probable transcriptional regulator, LysR family
YP_972351.1	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
YP_972352.1	PFAM: regulatory protein, AsnC/Lrp family; KEGG: mxa:MXAN_0502 transcriptional regulator, AsnC family
YP_972353.1	PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; KEGG: dge:Dgeo_1270 PAS/PAC sensor signal transduction histidine kinase
YP_972354.1	KEGG: pol:Bpro_0671 UDP-N-acetylglucosamine pyrophosphorylase; TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase
YP_972355.1	PFAM: cyclic nucleotide-binding; SMART: regulatory protein, Crp; KEGG: mfa:Mfla_1734 transcriptional regulator, Crp/Fnr family
YP_972356.1	PFAM: BLUF domain protein; KEGG: pol:Bpro_0667 sensors of blue-light using FAD
YP_972357.1	KEGG: rfr:Rfer_1085 hypothetical protein
YP_972358.1	KEGG: rfr:Rfer_1085 hypothetical protein
YP_972359.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rfr:Rfer_1086 transcriptional regulator, LysR family
YP_972360.1	catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr)
YP_972361.1	PFAM: peptidase M23B; KEGG: rfr:Rfer_0727 peptidase M23B
YP_972362.1	catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling
YP_972363.1	PFAM: major facilitator superfamily MFS_1; KEGG: reu:Reut_B4865 drug resistance transporter EmrB/QacA subfamily
YP_972364.1	essential respiratory protein A; may be involved in the transfer of iron-sulfur clusters; essential for growth using oxygen or alternate electron acceptors
YP_972365.1	PFAM: protein of unknown function DUF583; KEGG: pol:Bpro_4110 protein of unknown function DUF583
YP_972366.1	KEGG: pol:Bpro_4111 hypothetical protein
YP_972367.1	forms a direct contact with the tRNA during translation
YP_972368.1	in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit
YP_972369.1	PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: bte:BTH_II0256 serine/threonine protein kinase
YP_972370.1	PFAM: protein of unknown function DUF519; KEGG: rfr:Rfer_0720 protein of unknown function DUF519
YP_972371.1	TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: pol:Bpro_4129 rare lipoprotein A
YP_972372.1	KEGG: hsa:9053 microtubule-associated protein 7
YP_972373.1	TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; KEGG: rfr:Rfer_0654 5,10-methylenetetrahydrofolate reductase
YP_972374.1	PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: pol:Bpro_4131 ribosomal RNA methyltransferase RrmJ/FtsJ
YP_972375.1	catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine
YP_972376.1	PFAM: acyltransferase 3; KEGG: xom:XOO_0713 putative O-antigen acetylase
YP_972377.1	stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein
YP_972379.1	KEGG: mta:Moth_2476 transporter
YP_972380.1	PFAM: glycosyl transferase, family 2; KEGG: pfl:PFL_5488 glycosyl transferase, group 2 family protein
YP_972382.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; KEGG: pol:Bpro_4133 HAD-superfamily hydrolase subfamily IIB
YP_972383.1	PFAM: uncharacterized protein UPF0065; KEGG: pol:Bpro_4137 uncharacterized protein UPF0065
YP_972384.1	KEGG: rfr:Rfer_2960 hypothetical protein
YP_972385.1	PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_3901 ABC transporter-related protein
YP_972386.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_3902 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine
YP_972387.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_3903 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine
YP_972388.1	PFAM: extracellular solute-binding protein, family 3; KEGG: pol:Bpro_3904 extracellular solute-binding protein, family 3
YP_972389.1	PFAM: extracellular solute-binding protein, family 3; KEGG: rme:Rmet_2540 extracellular solute-binding protein, family 3
YP_972390.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: pol:Bpro_3905 transcriptional regulator, LysR family
YP_972391.1	PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: reu:Reut_A1264 tripartite ATP-independent periplasmic transporter, DctQ component
YP_972392.1	TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: reu:Reut_A1265 TRAP dicarboxylate transporter, DctM subunit
YP_972393.1	TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: rme:Rmet_1150 TRAP dicarboxylate transporter, DctP subunit
YP_972394.1	PFAM: ABC transporter, transmembrane region; ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_3906 ABC transporter-related protein
YP_972395.1	PFAM: thioesterase superfamily protein; KEGG: pol:Bpro_3907 thioesterase superfamily
YP_972396.1	PFAM: protein of unknown function DUF583; KEGG: rfr:Rfer_3896 protein of unknown function DUF583
YP_972397.1	PFAM: uncharacterized protein UPF0065; KEGG: bbr:BB1787 hypothetical protein
YP_972398.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
YP_972399.1	KEGG: rfr:Rfer_3513 hypothetical protein
YP_972400.1	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation
YP_972401.1	KEGG: pol:Bpro_3955 hypothetical protein
YP_972402.1	PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: rfr:Rfer_3517 3-hydroxyacyl-CoA dehydrogenase, NAD-binding
YP_972403.1	KEGG: rfr:Rfer_3518 hypothetical protein
YP_972404.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: pol:Bpro_3957 acyl-CoA dehydrogenase-like
YP_972405.1	PFAM: regulatory protein, TetR; KEGG: pol:Bpro_3958 transcriptional regulator, TetR family
YP_972407.1	KEGG: mca:MCA2677 hypothetical protein
YP_972408.1	KEGG: mca:MCA2676 hypothetical protein
YP_972410.1	KEGG: mca:MCA2674 hypothetical protein
YP_972411.1	KEGG: eba:ebA7239 hypothetical protein
YP_972412.1	KEGG: mca:MCA2672 hypothetical protein
YP_972413.1	KEGG: rso:RSc0874 probable transmembrane protein
YP_972414.1	TIGRFAM: phage tape measure protein; KEGG: eba:ebA7243 phage-related minor tail protein
YP_972415.1	KEGG: xfa:XF0518 hypothetical protein
YP_972416.1	KEGG: mfa:Mfla_2693 hypothetical protein
YP_972417.1	KEGG: vvu:VV10102 hypothetical protein
YP_972418.1	KEGG: mfa:Mfla_2695 hypothetical protein
YP_972419.1	KEGG: mfa:Mfla_2696 hypothetical protein
YP_972421.1	KEGG: noc:Noc_0397 ATPase domain protein
YP_972422.1	KEGG: mfa:Mfla_2698 hypothetical protein
YP_972423.1	PFAM: D12 class N6 adenine-specific DNA methyltransferase; KEGG: bte:BTH_II1068 DNA adenine methylase
YP_972424.1	KEGG: mfa:Mfla_2700 hypothetical protein
YP_972425.1	TIGRFAM: phage uncharacterized protein; KEGG: nma:NMA1852 hypothetical protein
YP_972426.1	KEGG: dvu:DVU2704 hypothetical protein
YP_972427.1	KEGG: ago:ACR285C transcription regulatory protein GAL11
YP_972428.1	KEGG: son:SO2973 prophage LambdaSo, lysozyme, putative
YP_972429.1	KEGG: par:Psyc_1026 hypothetical protein
YP_972430.1	PFAM: helix-turn-helix domain protein; peptidase S24, S26A and S26B; KEGG: pol:Bpro_0998 putative phage repressor
YP_972431.1	KEGG: pol:Bpro_0997 putative transcriptional regulator, Nlp
YP_972432.1	PFAM: transposase IS3/IS911 family protein; KEGG: mxa:MXAN_1716 transposase orfA, IS3 family
YP_972433.1	PFAM: Integrase, catalytic region; KEGG: mxa:MXAN_4473 transposase orfB, IS3 family
YP_972434.1	PFAM: Integrase, catalytic region; KEGG: nma:NMA1882 transposase
YP_972435.1	KEGG: dvu:DVU2689 bacteriophage DNA transposition B protein
YP_972437.1	KEGG: mca:MCA2952 hypothetical protein
YP_972439.1	KEGG: pol:Bpro_0996 hypothetical protein
YP_972441.1	KEGG: mfa:Mfla_2721 hypothetical protein
YP_972442.1	KEGG: pol:Bpro_3764 hypothetical protein
YP_972443.1	KEGG: ngo:NGO0464 hypothetical protein, putative phage associated protein
YP_972446.1	KEGG: pol:Bpro_3767 hypothetical protein
YP_972447.1	PFAM: protein of unknown function DUF1018; KEGG: sgl:SG0817 hypothetical protein
YP_972450.1	KEGG: dvu:DVU2696 hypothetical protein
YP_972451.1	FtsZ binding protein; synthetically lethal with a defect in the Min system; this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly
YP_972452.1	PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; KEGG: rfr:Rfer_3522 periplasmic sensor signal transduction histidine kinase
YP_972453.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pol:Bpro_3981 two component transcriptional regulator, winged helix family
YP_972454.1	catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate
YP_972455.1	PFAM: glycosyl transferase, family 4; KEGG: pol:Bpro_3998 glycosyl transferase, family 4
YP_972456.1	KEGG: net:Neut_0179 glycosyl transferase, family 2
YP_972457.1	PFAM: glycosyl transferase, family 2; Methionine biosynthesis MetW; Methyltransferase type 11; Methyltransferase type 12; KEGG: rru:Rru_B0044 glycosyl transferase, family 2
YP_972458.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: gbe:GbCGDNIH1_1035 hypothetical protein
YP_972459.1	KEGG: noc:Noc_2180 hypothetical protein
YP_972460.1	PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: mca:MCA2549 carbohydrate ABC transporter, ATP-binding protein, putative
YP_972461.1	PFAM: ABC-2 type transporter; KEGG: pae:PA5451 polysaccharide export transport system permease protein
YP_972462.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: noc:Noc_0767 PpiC-type peptidyl-prolyl cis-trans isomerase
YP_972463.1	KEGG: eba:ebA1598 hypothetical protein
YP_972464.1	KEGG: noc:Noc_0763 hypothetical protein
YP_972465.1	TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: eba:ebA1602 general (type II) secretion pathway (GSP) D protein
YP_972466.1	KEGG: eba:ebA1607 hypothetical protein
YP_972467.1	KEGG: eba:ebA1609 general secretion pathway protein M
YP_972468.1	PFAM: Fimbrial assembly family protein; KEGG: eba:ebA1610 hypothetical protein, INTERPRO suggestion: probable fimbrial assembly
YP_972469.1	KEGG: eba:ebA1612 general secretory pathway protein K
YP_972470.1	KEGG: eba:ebA1615 general secretion pathway protein J
YP_972471.1	KEGG: eba:ebB44 general secretion pathway protein I
YP_972472.1	TIGRFAM: general secretion pathway protein H; KEGG: eba:ebA1616 general secretion protein H
YP_972473.1	TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: eba:ebB45 general secretion pathway protein G
YP_972474.1	PFAM: type II secretion system protein; KEGG: eba:ebA1619 general secretion pathway protein F
YP_972475.1	KEGG: eba:ebA1622 general secretion pathway protein E (type II traffic warden ATPase); TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; General secretory system II, protein E domain protein; SMART: AAA ATPase
YP_972478.1	KEGG: eba:ebA2275 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related
YP_972479.1	TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: pol:Bpro_4018 glucose-1-phosphate thymidylyltransferase
YP_972480.1	PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: pol:Bpro_4021 dTDP-4-dehydrorhamnose reductase
YP_972481.1	TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: pol:Bpro_4022 dTDP-glucose 4,6-dehydratase
YP_972482.1	PFAM: regulatory protein, TetR; KEGG: pol:Bpro_4025 transcriptional regulator, TetR family
YP_972483.1	KEGG: rfr:Rfer_3530 hypothetical protein
YP_972484.1	type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP
YP_972485.1	PFAM: Peptidoglycan-binding LysM; transport-associated; KEGG: eba:ebA3069 conserved hypothetical protein, probably involved in cell wall turnover
YP_972486.1	PFAM: Negative transcriptional regulator; KEGG: bbr:BB2357 hypothetical protein
YP_972487.1	SMART: Rhodanese domain protein; KEGG: pol:Bpro_4049 rhodanese-like
YP_972488.1	PFAM: protein of unknown function DUF45; KEGG: pol:Bpro_4199 protein of unknown function DUF45
YP_972489.1	PFAM: phospholipid/glycerol acyltransferase; KEGG: pol:Bpro_4200 phospholipid/glycerol acyltransferase
YP_972490.1	TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: pol:Bpro_4201 histidinol-phosphate phosphatase
YP_972492.1	KEGG: pol:Bpro_4202 glycine--tRNA ligase
YP_972493.1	glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA
YP_972494.1	PFAM: cytochrome c, class I; KEGG: rso:RS03090 putative cytochrome c signal peptide protein
YP_972495.1	PFAM: beta-ketoacyl synthase; KEGG: pfo:Pfl_4213 beta-ketoacyl synthase
YP_972496.1	catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP
YP_972497.1	KEGG: pol:Bpro_4206 L-asparaginases, type II; TIGRFAM: L-asparaginases, type II; PFAM: Asparaginase/glutaminase
YP_972498.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: pol:Bpro_4207 transcriptional regulator, LysR family
YP_972499.1	Transfers the fatty acyl group on membrane lipoproteins
YP_972500.1	PFAM: CBS domain containing protein; transporter-associated region; KEGG: rfr:Rfer_3698 CBS
YP_972501.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pol:Bpro_4211 GCN5-related N-acetyltransferase
YP_972502.1	PFAM: regulatory protein, AsnC/Lrp family; KEGG: pol:Bpro_4212 transcriptional regulator, AsnC family
YP_972503.1	PFAM: alpha/beta hydrolase fold; KEGG: vch:VCA0221 lactonizing lipase
YP_972504.1	KEGG: mxa:MXAN_5523 lipase chaperone
YP_972505.1	KEGG: pol:Bpro_4213 4-hydroxyphenylpyruvate dioxygenase; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase
YP_972506.1	PFAM: uncharacterized protein UPF0065; KEGG: bpe:BP3827 hypothetical protein
YP_972507.1	phenylalanine 4-hydroxylase; phenylalanine 4-hydroxylase; catalyzes the formation of 4a-hydroxytetrahydrobiopterin and tyrosine from phenylalanine and tetrahydrobiopterin
YP_972508.1	KEGG: pol:Bpro_4221 putative lipase transmembrane protein
YP_972509.1	PFAM: AMP-dependent synthetase and ligase; KEGG: pol:Bpro_4225 AMP-dependent synthetase and ligase
YP_972510.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bpm:BURPS1710b_2019 ribose ABC transporter, periplasmic ribose-binding protein
YP_972511.1	PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: bxe:Bxe_B0574 ABC sugar transporter, fused ATPase subunits
YP_972512.1	PFAM: inner-membrane translocator; KEGG: ppu:PP_2456 ribose ABC transporter, permease protein
YP_972513.1	PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: pfl:PFL_2104 ribose operon repressor
YP_972514.1	TIGRFAM: ribokinase; PFAM: PfkB domain protein; KEGG: bcn:Bcen_1130 ribokinase
YP_972515.1	cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose; RbsD is required for efficient ribose utilization in E. coli; rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source
YP_972516.1	PFAM: beta-lactamase domain protein; KEGG: rfr:Rfer_3580 beta-lactamase-like
YP_972517.1	PFAM: Lytic transglycosylase, catalytic; KEGG: pol:Bpro_0652 lytic transglycosylase, catalytic
YP_972518.1	PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: rfr:Rfer_1087 5-formyltetrahydrofolate cyclo-ligase
YP_972519.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; Diverse 7TM receptor, transmembrane region; KEGG: pae:PA4929 hypothetical protein
YP_972520.1	PFAM: glutathione S-transferase, N-terminal domain; KEGG: rfr:Rfer_1089 glutathione S-transferase-like
YP_972522.1	PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase, HD sub domain; KEGG: pol:Bpro_3914 metal dependent phosphohydrolase
YP_972523.1	TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: pol:Bpro_3369 thioredoxin
YP_972524.1	KEGG: pol:Bpro_3915 HAD-superfamily hydrolase subfamily IIB; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: trehalose-phosphatase
YP_972525.1	PFAM: glycoside hydrolase 15-related; KEGG: pol:Bpro_3916 glycoside hydrolase 15-related
YP_972526.1	KEGG: pol:Bpro_3918 alpha,alpha-trehalose-phosphate synthase; TIGRFAM: alpha,alpha-trehalose-phosphate synthase [UDP-forming]; PFAM: glycosyl transferase, family 20
YP_972527.1	PFAM: ROK family protein; KEGG: pol:Bpro_4084 hypothetical protein
YP_972528.1	PFAM: protein of unknown function DUF861, cupin_3; KEGG: psp:PSPPH_3748 hypothetical protein
YP_972529.1	PFAM: 3-oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal domain protein; KEGG: psp:PSPPH_3749 MupB, putative
YP_972530.1	TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; KEGG: psp:PSPPH_3750 non-ribosomal peptide synthetase
YP_972531.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: psp:PSPPH_3751 glyoxalase family protein
YP_972532.1	PFAM: GCN5-related N-acetyltransferase; KEGG: psp:PSPPH_3752 acetyltransferase, GNAT family
YP_972533.1	KEGG: psp:PSPPH_3753 siderophore biosynthesis protein
YP_972534.1	TIGRFAM: 2,4-diaminobutyrate 4-transaminase; PFAM: aminotransferase class-III; KEGG: psp:PSPPH_3754 diaminobutyrate--2-oxoglutarate aminotransferase
YP_972535.1	PFAM: Pyridoxal-dependent decarboxylase; KEGG: ppr:PBPRA2230 putative diaminobutyrate-pyruvate transaminase & L-2,4-diaminobutyrate decarboxylase
YP_972536.1	PFAM: extracellular solute-binding protein, family 3; KEGG: bja:bll0102 glutamate/aspartate periplasmic binding protein precursor
YP_972537.1	KEGG: rfr:Rfer_0811 hypothetical protein
YP_972538.1	PFAM: protein of unknown function DUF185; KEGG: pol:Bpro_4086 protein of unknown function DUF185
YP_972539.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: pol:Bpro_4087 short-chain dehydrogenase/reductase SDR
YP_972540.1	KEGG: rfr:Rfer_0814 dihydroneopterin aldolase
YP_972541.1	PFAM: protein of unknown function DUF466; KEGG: nmu:Nmul_A1262 protein of unknown function DUF466
YP_972542.1	PFAM: carbon starvation protein CstA; KEGG: reu:Reut_A3417 carbon starvation protein CstA
YP_972543.1	PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: bpm:BURPS1710b_A1463 DNA-binding response regulator, LuxR family
YP_972544.1	PFAM: ATP-binding region, ATPase domain protein; histidine kinase, dimerisation and phosphoacceptor region; Cache, type 2 domain protein; KEGG: reu:Reut_A3418 ATP-binding region, ATPase-like:histidine kinase, dimerisation and phosphoacceptor region
YP_972545.1	PFAM: PP-loop domain protein; KEGG: pol:Bpro_4089 PP-loop
YP_972546.1	KEGG: pol:Bpro_4090 hypothetical protein
YP_972547.1	PFAM: Phosphoglycerate mutase; KEGG: rfr:Rfer_0816 phosphoglycerate mutase
YP_972548.1	KEGG: pol:Bpro_4092 putative threonine aldolase
YP_972549.1	PFAM: phage Tail Collar domain protein; KEGG: chu:CHU_2872 conserved hypothetical protein; possible microcystin dependent
YP_972550.1	PFAM: phage Tail Collar domain protein; KEGG: pen:PSEEN0745 phage tail collar
YP_972551.1	promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration
YP_972552.1	KEGG: xac:XAC2992 endoproteinase Arg-C
YP_972553.1	PFAM: peptidase S1 and S6, chymotrypsin/Hap; KEGG: xac:XAC2992 endoproteinase Arg-C
YP_972554.1	plays an essential role in ATP-dependent branch migration of the Holliday junction
YP_972555.1	PFAM: PhoH family protein; KEGG: pol:Bpro_4095 PhoH-like protein
YP_972556.1	PFAM: protein of unknown function UPF0054; KEGG: pol:Bpro_4096 protein of unknown function UPF0054
YP_972557.1	hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine
YP_972558.1	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: pol:Bpro_4099 cation diffusion facilitator family transporter
YP_972559.1	PFAM: helicase domain protein; DbpA, RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: pol:Bpro_0650 DEAD/DEAH box helicase-like
YP_972560.1	Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile
YP_972561.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bxe:Bxe_B2036 putative diguanylate cyclase (GGDEF domain)
YP_972562.1	PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; KEGG: bur:Bcep18194_A3957 N-acetylmuramoyl-L-alanine amidase, family 2
YP_972564.1	TIGRFAM: PTS system, fructose-specific, IIB subunnit; PTS system, fructose subfamily, IIC subunit; PFAM: phosphotransferase system, EIIC; phosphotransferase system PTS, fructose-specific IIB subunit; KEGG: bte:BTH_II0908 protein-N p-phosphohistidine-sugar phosphotransferase
YP_972565.1	PFAM: PfkB domain protein; KEGG: rru:Rru_A1971 PfkB
YP_972566.1	TIGRFAM: phosphocarrier, HPr family; phosphoenolpyruvate-protein phosphotransferase; PFAM: phosphocarrier HPr protein; PEP-utilizing enzyme; phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; PEP-utilising enzyme, mobile region; PEP-utilising enzyme domain protein; KEGG: rso:RSc2861 phosphotransferase system, fructose-specific IIA component / phosphocarrier protein HPr / phosphotransferase system, enzyme I, putative
YP_972567.1	PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: bte:BTH_II0905 transcriptional regulator LacI family
YP_972568.1	KEGG: xcv:XCV0408 HpaG LRR protein
YP_972569.1	TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: rfr:Rfer_1159 TonB-like
YP_972570.1	PFAM: Heat shock protein 70; KEGG: rso:RSp0521 probable chaperone transmembrane protein
YP_972571.1	KEGG: sru:SRU_2200 fibronectin type III domain protein
YP_972572.1	non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis
YP_972573.1	PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_0633 ABC transporter-related protein
YP_972574.1	TIGRFAM: ABC-2 type transporter, NodJ family; PFAM: ABC-2 type transporter; KEGG: rfr:Rfer_3557 ABC-2 type transporter, NodJ family
YP_972575.1	converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA
YP_972576.1	PFAM: regulatory protein, IclR; KEGG: reu:Reut_C5934 regulatory protein, IclR
YP_972577.1	PFAM: flavin reductase domain protein, FMN-binding; KEGG: reu:Reut_C5933 hypothetical protein
YP_972578.1	PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: bcn:Bcen_2208 transposase IS116/IS110/IS902
YP_972579.1	PFAM: uncharacterized protein UPF0065; KEGG: reu:Reut_C5932 hypothetical protein
YP_972580.1	PFAM: Endoribonuclease L-PSP; KEGG: reu:Reut_C5931 endoribonuclease L-PSP
YP_972581.1	PFAM: amidohydrolase 2; KEGG: reu:Reut_C5930 amidohydrolase 2
YP_972582.1	PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: reu:Reut_C5929 5-carboxymethyl-2-hydroxymuconate delta-isomerase
YP_972583.1	KEGG: reu:Reut_C5928 hydratase/decarboxylase; TIGRFAM: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; PFAM: Hydratase/decarboxylase
YP_972584.1	PFAM: HpcH/HpaI aldolase; KEGG: reu:Reut_C5927 2-dehydro-3-deoxyglucarate aldolase
YP_972585.1	PFAM: regulatory protein, MarR; KEGG: pol:Bpro_0623 transcriptional regulator, MarR family
YP_972586.1	PFAM: OsmC family protein; KEGG: pfo:Pfl_2206 OsmC-like protein
YP_972587.1	PFAM: metallophosphoesterase; KEGG: ade:Adeh_3700 metallophosphoesterase
YP_972588.1	PFAM: protein kinase; UspA domain protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: ade:Adeh_3699 serine/threonine protein kinase
YP_972589.1	catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro; specific substrate in vivo has not been identified yet; plays a role in long-term cell survival and expression of surface appendages
YP_972590.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mfa:Mfla_0432 two component transcriptional regulator, winged helix family
YP_972591.1	TIGRFAM: conserved repeat domain; PFAM: protein of unknown function DUF11; KEGG: rsp:RSP_3666 hypothetical protein
YP_972592.1	PFAM: extracellular solute-binding protein, family 1; KEGG: jan:Jann_3935 extracellular solute-binding protein, family 1
YP_972593.1	PFAM: response regulator receiver; ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-4 domain protein; KEGG: mag:amb1110 signal transduction histidine kinase
YP_972594.1	PFAM: Carbohydrate-selective porin OprB; KEGG: rme:Rmet_0352 carbohydrate-selective porin OprB
YP_972596.1	KEGG: sru:SRU_0623 hypothetical protein
YP_972597.1	TIGRFAM: YD repeat protein; PFAM: RHS protein; YD repeat-containing protein; KEGG: ecs:ECs2061 RhsE
YP_972603.1	molecular chaperone
YP_972604.1	KEGG: bur:Bcep18194_B2977 hypothetical protein
YP_972605.1	PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: pol:Bpro_0606 pseudouridine synthase, Rsu
YP_972606.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase, HAMP region domain protein; KEGG: vvy:VVA1104 predicted signal transduction protein
YP_972607.1	KEGG: vvy:VVA1103 hypothetical protein
YP_972608.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rfr:Rfer_3119 methyl-accepting chemotaxis sensory transducer
YP_972609.1	PFAM: cyclic nucleotide-binding; SMART: regulatory protein, Crp; KEGG: pol:Bpro_0605 transcriptional regulator, Crp/Fnr family
YP_972610.1	PFAM: Carbohydrate binding family 6; KEGG: xac:XAC0817 hypothetical protein
YP_972611.1	TIGRFAM: cysteine synthases; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: rfr:Rfer_3460 cysteine synthases
YP_972612.1	PFAM: Endonuclease/exonuclease/phosphatase; KEGG: rfr:Rfer_3616 endonuclease/exonuclease/phosphatase
YP_972613.1	PFAM: phospholipase D/Transphosphatidylase; KEGG: pol:Bpro_0025 phospholipase D/transphosphatidylase
YP_972614.1	KEGG: rfr:Rfer_3618 hypothetical protein
YP_972615.1	PFAM: FAD dependent oxidoreductase; KEGG: rfr:Rfer_3461 FAD dependent oxidoreductase
YP_972616.1	KEGG: dar:Daro_0588 hypothetical protein
YP_972617.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: tbd:Tbd_1620 chemotaxis sensory transducer
YP_972618.1	PFAM: uncharacterized protein UPF0065; KEGG: pol:Bpro_2668 uncharacterized protein UPF0065
YP_972619.1	PFAM: class II aldolase/adducin family protein; KEGG: reu:Reut_A0893 hypothetical protein
YP_972620.1	PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein, alpha subunit; KEGG: bbr:BB0621 electron transfer flavoprotein alpha-subunit
YP_972621.1	PFAM: electron transfer flavoprotein beta-subunit; KEGG: bbr:BB0620 electron transfer flavoprotein beta-subunit
YP_972622.1	PFAM: uncharacterized protein UPF0065; KEGG: reu:Reut_B3875 hypothetical protein
YP_972623.1	PFAM: uncharacterized protein UPF0065; KEGG: reu:Reut_A0242 hypothetical protein
YP_972624.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: reu:Reut_B3874 L-carnitine dehydratase/bile acid-inducible protein F
YP_972625.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
YP_972626.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rfr:Rfer_2592 acyl-CoA dehydrogenase-like
YP_972627.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bxe:Bxe_A1390 putative acyl-CoA dehydrogenase
YP_972628.1	PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: reu:Reut_B3873 enoyl-CoA hydratase/isomerase:3-hydroxyacyl-CoA dehydrogenase, 3-hydroxyacyl-CoA dehydrogenase, NAD-binding
YP_972629.1	PFAM: regulatory protein, MarR; regulatory protein, LysR; LysR, substrate-binding; KEGG: bxe:Bxe_A1392 transcriptional regulator, LysR family
YP_972630.1	putative metalloprotease
YP_972631.1	KEGG: pol:Bpro_1031 putative transmembrane protein
YP_972632.1	PFAM: protein of unknown function DUF88; KEGG: pol:Bpro_1025 protein of unknown function DUF88
YP_972633.1	catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis
YP_972634.1	PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; KEGG: dge:Dgeo_1521 periplasmic sensor signal transduction histidine kinase
YP_972635.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bcn:Bcen_5049 two component transcriptional regulator, winged helix family
YP_972636.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bur:Bcep18194_B0723 RND efflux system, outer membrane lipoprotein, NodT family
YP_972637.1	PFAM: protein of unknown function DUF214; KEGG: ccr:CC2090 hypothetical protein
YP_972638.1	PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: ccr:CC2091 ABC transporter, ATP-binding protein
YP_972639.1	PFAM: secretion protein HlyD family protein; KEGG: ccr:CC2092 HlyD family secretion protein
YP_972640.1	TIGRFAM: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; PFAM: HAD-superfamily hydrolase, subfamily IB hypothetical 1; KEGG: pfl:PFL_4883 phosphoserine phosphatase, putative
YP_972641.1	PFAM: alpha/beta hydrolase fold; KEGG: pfl:PFL_4885 carboxylesterase
YP_972642.1	KEGG: pfl:PFL_4879 hypothetical protein
YP_972643.1	KEGG: pfl:PFL_4880 hypothetical protein
YP_972644.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: dvu:DVUA0045 aminotransferase, DegT/DnrJ/EryC1/StrS family
YP_972645.1	KEGG: pfl:PFL_4878 hypothetical protein
YP_972646.1	KEGG: pfl:PFL_4886 hypothetical protein
YP_972647.1	PFAM: aminotransferase class-III; KEGG: pfl:PFL_4884 aminotransferase, class III
YP_972648.1	KEGG: psp:PSPPH_3580 hypothetical protein
YP_972649.1	KEGG: bur:Bcep18194_B1775 hypothetical protein
YP_972653.1	KEGG: xcv:XCV0561 putative secreted protein
YP_972654.1	KEGG: ade:Adeh_0244 LigA
YP_972655.1	KEGG: rfr:Rfer_3814 excinuclease ABC, A subunit; TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter-related protein; SMART: AAA ATPase
YP_972656.1	PFAM: Extracellular ligand-binding receptor; KEGG: pol:Bpro_4140 extracellular ligand-binding receptor
YP_972657.1	PFAM: porin, Gram-negative type; KEGG: rme:Rmet_1907 porin, gram-negative type
YP_972658.1	PFAM: porin, Gram-negative type; KEGG: reu:Reut_B5850 porin, gram-negative type
YP_972659.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pol:Bpro_4142 general substrate transporter
YP_972660.1	PFAM: DSBA oxidoreductase; KEGG: pol:Bpro_4153 DsbA oxidoreductase
YP_972661.1	PFAM: protein of unknown function DUF1289; KEGG: pol:Bpro_4154 YbaK/prolyl-tRNA synthetase associated region
YP_972662.1	PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: pol:Bpro_4154 YbaK/prolyl-tRNA synthetase associated region
YP_972663.1	PFAM: pyruvate carboxyltransferase; KEGG: rfr:Rfer_3824 pyruvate carboxyltransferase
YP_972664.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: pol:Bpro_4156 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
YP_972665.1	PFAM: biotin/lipoyl attachment domain-containing protein; phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: pol:Bpro_4157 carbamoyl-phosphate synthase L chain, ATP-binding
YP_972666.1	KEGG: pol:Bpro_4158 putative transmembrane protein
YP_972667.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
YP_972668.1	PFAM: carboxyl transferase; KEGG: pol:Bpro_4160 propionyl-CoA carboxylase
YP_972669.1	activates fatty acids by binding to coenzyme A
YP_972670.1	PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: rfr:Rfer_3834 transcriptional regulator, AraC family
YP_972671.1	PFAM: Integrase, catalytic region; KEGG: eba:ebA5932 transposase
YP_972672.1	KEGG: eba:ebA5933 transposition helper protein
YP_972673.1	PFAM: peptidase C48, SUMO/Sentrin/Ubl1; KEGG: xcv:XCV0437 Xanthomonas outer protein D
YP_972674.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bxe:Bxe_B1631 HAD-superfamily hydrolase, subfamily IA, variant3
YP_972675.1	PFAM: response regulator receiver; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; KEGG: rme:Rmet_2881 periplasmic sensor hybrid histidine kinase
YP_972676.1	KEGG: pol:Bpro_4182 hypothetical protein
YP_972677.1	KEGG: reu:Reut_A3332 hypothetical protein
YP_972678.1	alpha-aspartyl dipeptidase; catalyzes the hydrolysis of dipeptides with an N-terminal aspartate residue; belongs to peptidase S51 family
YP_972679.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rfr:Rfer_3838 acyl-CoA dehydrogenase-like
YP_972680.1	PFAM: acyltransferase 3; KEGG: mxa:MXAN_1041 acyltransferase family protein
YP_972681.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pol:Bpro_4186 short-chain dehydrogenase/reductase SDR
YP_972682.1	KEGG: pol:Bpro_4187 acetyl-CoA C-acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase
YP_972683.1	catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity; unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol
YP_972684.1	PFAM: carbonic anhydrase; KEGG: rfr:Rfer_3841 carbonate dehydratase
YP_972685.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: pol:Bpro_4190 acyl-CoA dehydrogenase-like
YP_972686.1	PFAM: regulatory protein, MerR; KEGG: rfr:Rfer_3843 transcriptional regulator, MerR family
YP_972687.1	PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: pol:Bpro_4229 ABC transporter-related protein
YP_972688.1	PFAM: CheB methylesterase; response regulator receiver; KEGG: rfr:Rfer_0571 response regulator receiver modulated CheB methylesterase
YP_972689.1	catalyzes the conversion of glutamine residues to glutamate on methyl-accepting chemotaxis receptors
YP_972690.1	PFAM: MCP methyltransferase, CheR-type; Methyltransferase type 11; KEGG: rfr:Rfer_0569 MCP methyltransferase, CheR-type
YP_972691.1	PFAM: CheW domain protein; KEGG: rfr:Rfer_0568 CheW protein
YP_972692.1	PFAM: CheW domain protein; ATP-binding region, ATPase domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; KEGG: rfr:Rfer_0567 CheA signal transduction histidine kinase
YP_972693.1	PFAM: response regulator receiver; KEGG: rfr:Rfer_0566 response regulator receiver domain protein
YP_972694.1	KEGG: rfr:Rfer_0565 hypothetical protein
YP_972695.1	PFAM: response regulator receiver; ATP-binding region, ATPase domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: rfr:Rfer_0564 putative signal transduction histidine kinase
YP_972696.1	PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: rfr:Rfer_0563 two component transcriptional regulator, LuxR family
YP_972697.1	TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; KEGG: rfr:Rfer_0562 flagellar biosynthetic protein FliR
YP_972698.1	TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ, family 3; KEGG: rfr:Rfer_0561 flagellar biosynthetic protein FliQ
YP_972699.1	FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus
YP_972700.1	PFAM: flagellar biosynthesis protein, FliO; KEGG: rfr:Rfer_0559 hypothetical protein
YP_972701.1	TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: rfr:Rfer_0558 flagellar motor switch FliN
YP_972702.1	PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM; KEGG: rfr:Rfer_0557 flagellar motor switch protein FliM
YP_972703.1	PFAM: flagellar basal body-associated protein FliL; KEGG: rfr:Rfer_0556 flagellar basal body-associated protein FliL
YP_972704.1	PFAM: flagellar hook-length control protein; KEGG: rfr:Rfer_0555 flagellar hook-length control protein
YP_972705.1	TIGRFAM: flagellar export protein FliJ; KEGG: rfr:Rfer_0554 flagellar export FliJ
YP_972706.1	KEGG: rfr:Rfer_0553 ATPase FliI/YscN; TIGRFAM: ATPase, FliI/YscN family; flagellar protein export ATPase FliI; PFAM: H+-transporting two-sector ATPase, alpha/beta subunit, central region; H+-transporting two-sector ATPase, alpha/beta subunit domain protein; SMART: AAA ATPase
YP_972707.1	KEGG: rfr:Rfer_0552 flagellar assembly protein FliH
YP_972708.1	PFAM: flagellar motor switch protein FliG; KEGG: rfr:Rfer_0551 flagellar motor switch protein FliG
YP_972709.1	TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring C-terminal domain protein; KEGG: rfr:Rfer_0550 flagellar M-ring protein FliF
YP_972710.1	TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: rfr:Rfer_0549 flagellar hook-basal body complex protein
YP_972711.1	KEGG: rfr:Rfer_0634 flagellar protein FliT
YP_972712.1	PFAM: flagellar protein FliS; KEGG: rfr:Rfer_0633 flagellar protein FliS
YP_972713.1	PFAM: flagellar hook-associated protein 2 domain protein; flagellar hook-associated 2 domain protein; flagellin hook IN repeat protein; KEGG: rfr:Rfer_0632 flagellar hook-associated 2-like
YP_972714.1	PFAM: flagellin domain protein; flagellin hook IN repeat protein; KEGG: noc:Noc_2367 flagellin
YP_972715.1	PFAM: flagellin domain protein; flagellin hook IN repeat protein; KEGG: noc:Noc_2367 flagellin
YP_972716.1	KEGG: neu:NE2176 hypothetical protein
YP_972717.1	KEGG: neu:NE2172 SAM (and some other nucleotide) binding motif
YP_972718.1	KEGG: bur:Bcep18194_A3337 hypothetical protein
YP_972719.1	PFAM: FAD dependent oxidoreductase; KEGG: bur:Bcep18194_A3336 FAD dependent oxidoreductase
YP_972720.1	catalyzes the formation of dTDP-D-fucosamine from dTDP-4-oxo-6-deoxy-D-glucose in enterobacterial common antigen biosynthesis
YP_972721.1	PFAM: glycosyl transferase, family 2; glycosyl transferase, group 1; KEGG: xcb:XC_2258 O-antigen biosynthesis protein
YP_972722.1	KEGG: rfr:Rfer_3702 MotA/TolQ/ExbB proton channel
YP_972723.1	PFAM: OmpA/MotB domain protein; KEGG: rfr:Rfer_3703 OmpA/MotB
YP_972724.1	PFAM: response regulator receiver; KEGG: rfr:Rfer_3704 response regulator receiver domain protein
YP_972725.1	PFAM: Chemotaxis phosphatase, CheZ; KEGG: rfr:Rfer_3705 chemotaxis phosphatase, CheZ
YP_972726.1	PFAM: type III secretion exporter; KEGG: rfr:Rfer_3706 type III secretion exporter
YP_972727.1	TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein; KEGG: rfr:Rfer_3707 flagellar biosynthesis protein FlhA
YP_972728.1	PFAM: GTP-binding signal recognition particle SRP54, G- domain; SMART: AAA ATPase; KEGG: rfr:Rfer_3708 GTP-binding signal recognition particle SRP54, G-domain
YP_972729.1	KEGG: rfr:Rfer_3709 hypothetical protein
YP_972730.1	TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: rfr:Rfer_3710 sigma 28 (flagella/sporulation)
YP_972732.1	PFAM: Anti-sigma-28 factor, FlgM family protein; KEGG: rfr:Rfer_3712 anti-sigma-28 factor, FlgM
YP_972733.1	PFAM: SAF domain; KEGG: rfr:Rfer_3713 flageller protein FlgA
YP_972734.1	TIGRFAM: flagellar basal-body rod protein FlgB; PFAM: flagellar basal body rod protein; KEGG: rfr:Rfer_3714 flagellar basal-body rod protein FlgB
YP_972735.1	TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: rfr:Rfer_3715 flagellar basal-body rod protein FlgC
YP_972736.1	PFAM: flagellar hook capping protein; KEGG: rfr:Rfer_3716 flagellar hook capping protein
YP_972737.1	PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; KEGG: rfr:Rfer_3717 protein of unknown function DUF1078-like
YP_972738.1	TIGRFAM: flagellar basal-body rod protein FlgF; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: rfr:Rfer_3718 flagellar basal-body rod FlgF
YP_972739.1	TIGRFAM: flagellar basal-body rod protein FlgG; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: rfr:Rfer_3719 flagellar basal-body rod FlgG
YP_972740.1	PFAM: flagellar L-ring protein; KEGG: rfr:Rfer_3720 flagellar L-ring protein
YP_972741.1	KEGG: pst:PSPTO_2076 hypothetical protein
YP_972742.1	part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum
YP_972743.1	KEGG: rfr:Rfer_3722 mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; TIGRFAM: flagellar rod assembly protein/muramidase FlgJ; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; SMART: Lysozyme subfamily 2
YP_972744.1	TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: rfr:Rfer_3723 flagellar hook-associated protein
YP_972745.1	TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; KEGG: rfr:Rfer_3724 flagellin-like
YP_972746.1	PFAM: HDOD; KEGG: cvi:CV3451 putative signal transduction protein containing EAL and modified HD-GYP domains
YP_972748.1	PFAM: regulatory protein GntR, HTH; aminotransferase, class I and II; KEGG: pol:Bpro_4233 transcriptional regulator, GntR family
YP_972749.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pol:Bpro_4234 hypothetical protein
YP_972750.1	PFAM: protein of unknown function DUF6, transmembrane; KEGG: pol:Bpro_4235 protein of unknown function DUF6, transmembrane
YP_972751.1	PFAM: aminotransferase, class I and II; KEGG: pol:Bpro_4240 aminotransferase, class I and II
YP_972752.1	PFAM: glutathione S-transferase, N-terminal domain; glutathione S-transferase, C-terminal domain; KEGG: pol:Bpro_4241 glutathione S-transferase-like
YP_972753.1	TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: rfr:Rfer_3731 phenazine biosynthesis PhzC/PhzF protein
YP_972754.1	KEGG: pol:Bpro_4243 hypothetical protein
YP_972755.1	PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: pol:Bpro_4245 pyridoxal-5'-phosphate-dependent enzyme, beta subunit
YP_972757.1	PFAM: Phosphoglycerate mutase; KEGG: rfr:Rfer_3732 phosphoglycerate mutase
YP_972758.1	PFAM: Creatininase; KEGG: rfr:Rfer_3746 creatininase
YP_972759.1	PFAM: Integrase, catalytic region; KEGG: bpa:BPP1897 IS1002 transposase
YP_972760.1	PFAM: chemotaxis sensory transducer; KEGG: eca:ECA4335 methyl-accepting chemotaxis protein
YP_972761.1	PFAM: Propeptide, PepSY amd peptidase M4; PepSY-associated TM helix domain protein; KEGG: xcb:XC_0989 hypothetical protein
YP_972762.1	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: xcb:XC_0988 TonB-dependent receptor
YP_972763.1	KEGG: rfr:Rfer_0616 hypothetical protein
YP_972764.1	PFAM: protein of unknown function DUF1504; KEGG: pol:Bpro_2221 protein of unknown function DUF1504
YP_972765.1	PFAM: protein of unknown function DUF1468; KEGG: bpa:BPP0373 hypothetical protein
YP_972766.1	PFAM: protein of unknown function DUF112, transmembrane; KEGG: bbr:BB0377 hypothetical protein
YP_972767.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: pol:Bpro_5101 transcriptional regulator, LysR family
YP_972768.1	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sme:SMc02380 putative oxidoreductase transmembrane protein
YP_972769.1	PFAM: Threonyl/alanyl tRNA synthetase, SAD; KEGG: bur:Bcep18194_A5605 alanyl-transfer RNA synthetase
YP_972770.1	PFAM: cytochrome c biogenesis protein, transmembrane region; KEGG: pol:Bpro_4257 thiol-disulfide interchange protein DsbD-like
YP_972771.1	PFAM: regulatory protein, TetR; KEGG: ret:RHE_CH00565 probable transcriptional regulator protein, TetR family
YP_972772.1	PFAM: major facilitator superfamily MFS_1; KEGG: pst:PSPTO_3159 mutlidrug resistance protein, putative
YP_972773.1	PFAM: protein of unknown function DUF323; KEGG: rba:RB8026 hypothetical protein
YP_972774.1	KEGG: eba:ebA5821 hypothetical protein
YP_972775.1	PFAM: Integral membrane protein TerC; KEGG: xcb:XC_4321 export protein
YP_972776.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: eba:ebA2202 transcriptional regulator, LysR family
YP_972777.1	KEGG: tbd:Tbd_2277 hypothetical protein
YP_972778.1	TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: tbd:Tbd_2278 prevent-host-death protein
YP_972779.1	PFAM: sulfatase; KEGG: nar:Saro_0474 sulfatase
YP_972780.1	PFAM: uncharacterized protein UPF0065; KEGG: bbr:BB1787 hypothetical protein
YP_972781.1	PFAM: regulatory protein, MarR; transcriptional regulator TrmB; KEGG: bbr:BB1786 putative transcriptional regulator
YP_972782.1	catalyzes the formation of coproporphyrinogen from uroporphyrinogen III
YP_972784.1	KEGG: rfr:Rfer_0822 primosomal protein N'; TIGRFAM: primosomal protein N'; PFAM: helicase domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like
YP_972785.1	KEGG: xcv:XCV2942 Xanthomonas outer protein F2
YP_972786.1	KEGG: xcv:XCV2943 hypothetical protein
YP_972787.1	PFAM: Auxin Efflux Carrier; KEGG: pol:Bpro_4280 auxin efflux carrier
YP_972788.1	PFAM: UvrD/REP helicase; KEGG: pol:Bpro_4281 UvrD/REP helicase
YP_972789.1	PFAM: phospholipase A1; KEGG: rfr:Rfer_0525 phospholipase
YP_972790.1	KEGG: rfr:Rfer_0375 hypothetical protein
YP_972791.1	PFAM: UspA domain protein; KEGG: rfr:Rfer_1666 UspA
YP_972792.1	Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr)
YP_972793.1	PFAM: glutathione S-transferase, N-terminal domain; glutathione S-transferase, C-terminal domain; KEGG: bur:Bcep18194_B2249 glutathione S-transferase-like
YP_972796.1	KEGG: mxa:MXAN_5466 peptidase, S1E (streptogrisin A) subfamily
YP_972797.1	PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: bxe:Bxe_B1317 short-chain dehydrogenase
YP_972798.1	KEGG: pol:Bpro_0461 hypothetical protein
YP_972799.1	KEGG: pol:Bpro_0460 hypothetical protein
YP_972800.1	KEGG: pol:Bpro_0459 hypothetical protein
YP_972801.1	PFAM: YiaAB two helix domain protein; KEGG: pol:Bpro_0458 hypothetical protein
YP_972802.1	KEGG: eba:ebA1598 hypothetical protein
YP_972803.1	PFAM: regulatory protein, AsnC/Lrp family; KEGG: bte:BTH_II1100 leucine-responsive regulatory protein, putative
YP_972804.1	catalyzes conversion of 1-aminocyclopropane-1-carboxylate to ammonia and alpha-ketobutyrate
YP_972805.1	PFAM: uncharacterized protein UPF0065; KEGG: pol:Bpro_3827 uncharacterized protein UPF0065
YP_972806.1	PFAM: chemotaxis sensory transducer; KEGG: eca:ECA4335 methyl-accepting chemotaxis protein
YP_972807.1	KEGG: aba:Acid345_1191 hypothetical protein
YP_972808.1	PFAM: phospholipid/glycerol acyltransferase; major facilitator superfamily MFS_1; KEGG: pol:Bpro_0457 phospholipid/glycerol acyltransferase
YP_972809.1	KEGG: pol:Bpro_0456 hypothetical protein
YP_972810.1	SMART: helix-turn-helix domain protein; KEGG: pol:Bpro_0454 transcriptional regulator, XRE family
YP_972811.1	PFAM: peptidase S24, S26A and S26B; KEGG: son:SO2652 prophage MuSo2, transcriptional regulator, Cro/CI family
YP_972812.1	KEGG: plu:plu3476 hypothetical protein
YP_972813.1	KEGG: rso:RSc2151 probable signal peptide protein
YP_972814.1	PFAM: uncharacterized protein UPF0065; KEGG: reu:Reut_A0548 hypothetical protein
YP_972815.1	PFAM: Integrase, catalytic region; KEGG: bpa:BPP1897 IS1002 transposase
YP_972816.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rso:RSc1881 putative transmembrane oxidoreductase protein
YP_972817.1	TIGRFAM: alkylhydroperoxidase like protein, AhpD family; uncharacterized peroxidase-related enzyme; PFAM: Carboxymuconolactone decarboxylase; KEGG: rso:RSc1888 hypothetical protein
YP_972818.1	PFAM: FAD dependent oxidoreductase; KEGG: dar:Daro_3842 FAD dependent oxidoreductase
YP_972819.1	PFAM: domain of unknown function DUF1745; KEGG: rfr:Rfer_0622 hypothetical protein
YP_972820.1	KEGG: pol:Bpro_0449 hypothetical protein
YP_972821.1	PFAM: histone family protein DNA-binding protein; KEGG: bcn:Bcen_4388 histone-like DNA-binding protein
YP_972822.1	KEGG: bja:bll4165 hypothetical protein
YP_972823.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: mfa:Mfla_1785 short-chain dehydrogenase/reductase SDR
YP_972824.1	KEGG: rpb:RPB_3098 hypothetical protein
YP_972825.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpb:RPB_3099 binding-protein-dependent transport systems inner membrane component
YP_972826.1	PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: mag:amb1858 ABC-type nitrate/sulfonate/bicarbonate transport system
YP_972827.1	KEGG: blo:BL0513 possible acyl-CoA reductase
YP_972828.1	KEGG: blo:BL0514 possible acyl protein synthase/acyl-CoA reductase-like protein
YP_972829.1	PFAM: deoxyribodipyrimidine photolyase-related protein; KEGG: rba:RB8082 putative a deoxyribodipyrimidine photolyase-related protein
YP_972830.1	PFAM: helix-turn-helix domain protein; KEGG: pol:Bpro_0338 transcriptional regulator, XRE family
YP_972831.1	PFAM: HipA domain protein; KEGG: pol:Bpro_0337 HipA-like
YP_972832.1	KEGG: zmo:ZMO1759 hypothetical protein
YP_972833.1	PFAM: glucose sorbosone dehydrogenase; KEGG: dra:DRA0203 oxidoreductase, putative
YP_972834.1	PFAM: superoxide dismutase, copper/zinc binding; KEGG: dra:DRA0202 superoxide dismutase (sodC), Cu-Zn family
YP_972835.1	PFAM: major facilitator superfamily MFS_1; KEGG: rsp:RSP_1373 major facilitator superfamily (MFS) transporter
YP_972836.1	PFAM: response regulator receiver; helix-turn-helix, Fis-type; KEGG: reu:Reut_A3402 helix-turn-helix, fis-type
YP_972837.1	PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; SMART: PAS domain containing protein; KEGG: rfr:Rfer_3588 multi-sensor signal transduction histidine kinase
YP_972838.1	KEGG: rfr:Rfer_3589 putative proline rich signal peptide protein
YP_972839.1	TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; KEGG: pol:Bpro_4436 sun protein
YP_972840.1	KEGG: pol:Bpro_4440 LemA
YP_972841.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter
YP_972842.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme
YP_972843.1	present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors
YP_972844.1	binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit
YP_972845.1	in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA
YP_972846.1	binds directly to 23S ribosomal RNA
YP_972847.1	KEGG: rfr:Rfer_3597 NusG antitermination factor; TIGRFAM: transcription termination/antitermination factor NusG; PFAM: transcription antitermination protein NusG; KOW domain protein; SMART: NGN domain protein; KOW (Kyrpides, Ouzounis, Woese) domain protein
YP_972848.1	forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force
YP_972849.1	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu
YP_972850.1	catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione
YP_972851.1	TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein; KEGG: xac:XAC4292 benzoate transporter
YP_972852.1	PFAM: K+ potassium transporter; KEGG: pol:Bpro_4582 K+ potassium transporter
YP_972853.1	TIGRFAM: glutamate--cysteine ligase; KEGG: pol:Bpro_4583 glutamate--cysteine ligase GshA
YP_972854.1	PFAM: cation transporter; KEGG: bpe:BP0574 Trk system potassium uptake protein
YP_972855.1	involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain
YP_972856.1	Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway
YP_972857.1	required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA
YP_972858.1	PFAM: Rare lipoprotein B; KEGG: rfr:Rfer_0759 rare lipoprotein B
YP_972859.1	leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase
YP_972860.1	PFAM: peptidase S24, S26A and S26B; KEGG: son:SO2652 prophage MuSo2, transcriptional regulator, Cro/CI family
YP_972861.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; KEGG: bxe:Bxe_C0015 putative diguanylate cyclase(GGDEF)/phosphodiesterase(EAL) with PAS/PAC and GAF sensors
YP_972862.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: rfr:Rfer_0757 biopolymer transport protein ExbD/TolR
YP_972863.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: pol:Bpro_4607 MotA/TolQ/ExbB proton channel
YP_972864.1	catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis
YP_972865.1	PFAM: SmpA/OmlA domain protein; KEGG: rfr:Rfer_0754 SmpA/OmlA
YP_972866.1	PFAM: ferric-uptake regulator; KEGG: rfr:Rfer_0753 ferric uptake regulator, FUR family
YP_972867.1	catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system
YP_972868.1	PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; KEGG: pol:Bpro_4612 PTS IIA-like nitrogen-regulatory protein PtsN
YP_972869.1	TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: rfr:Rfer_0750 sigma 54 modulation protein/ribosomal protein S30EA
YP_972870.1	catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase
YP_972871.1	PFAM: protein of unknown function DUF306, Meta and HslJ; KEGG: ppr:PBPRA2462 hypothetical protein
YP_972872.1	TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: pol:Bpro_4628 thioredoxin
YP_972873.1	KEGG: pol:Bpro_4627 phosphoribosylaminoimidazole carboxylase, catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase
YP_972874.1	With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway
YP_972875.1	TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5 domain protein; SUA5/yciO/yrdC, N-terminal domain; KEGG: pol:Bpro_4625 SUA5/YciO/YrdC/YwlC
YP_972876.1	KEGG: xom:XOO_3175 lipase
YP_972877.1	PFAM: OmpW family protein; KEGG: rfr:Rfer_0194 OmpW
YP_972878.1	KEGG: rso:RSc0580 putative lipase / esterase protein
YP_972879.1	TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: peptidase S13, D-Ala-D-Ala carboxypeptidase C; KEGG: rfr:Rfer_0191 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
YP_972880.1	PFAM: peptidase M22, glycoprotease; KEGG: rfr:Rfer_0189 peptidase M22, glycoprotease
YP_972881.1	TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: rfr:Rfer_0188 ribosomal-protein-alanine acetyltransferase
YP_972882.1	KEGG: pol:Bpro_4619 phage SPO1 DNA polymerase-related protein
YP_972883.1	TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2+ transporter protein, CorA family protein; KEGG: pol:Bpro_4615 magnesium and cobalt transport protein CorA
YP_972884.1	enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine
YP_972885.1	PFAM: AMP-dependent synthetase and ligase; KEGG: pol:Bpro_4543 AMP-dependent synthetase and ligase
YP_972887.1	KEGG: rso:RSc0573 probable fructose-bisphosphate aldolase protein; TIGRFAM: ketose-bisphosphate aldolases; fructose-bisphosphate aldolase, class II, Calvin cycle subtype; PFAM: ketose-bisphosphate aldolase, class-II
YP_972888.1	PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; KEGG: pol:Bpro_4631 histidine kinase
YP_972889.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pol:Bpro_4632 two component transcriptional regulator, winged helix family
YP_972890.1	KEGG: pol:Bpro_4633 PAP2 (acid phosphatase) superfamily protein-like
YP_972891.1	PFAM: phosphoesterase, PA-phosphatase related; KEGG: bpm:BURPS1710b_A1526 PAP2 family protein
YP_972892.1	catalyzes the formation of phosphoenolpyruvate from pyruvate
YP_972893.1	PFAM: peptidase M24; peptidase M24B, X-Pro dipeptidase/aminopeptidase domain protein; KEGG: rfr:Rfer_0086 peptidase M24
YP_972894.1	PFAM: Nucleotidyl transferase; KEGG: rfr:Rfer_0085 nucleotidyl transferase
YP_972895.1	PFAM: S-adenosylmethionine decarboxylase related; KEGG: dar:Daro_0026 S-adenosylmethionine decarboxylase related
YP_972896.1	TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase, central region; KEGG: pol:Bpro_4827 transketolase
YP_972897.1	KEGG: bxe:Bxe_A0667 hypothetical protein
YP_972898.1	KEGG: psb:Psyr_2848 hypothetical protein
YP_972899.1	KEGG: pol:Bpro_4826 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase
YP_972900.1	PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A4072 major facilitator superfamily (MFS) transporter
YP_972901.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: ret:RHE_CH03538 putative transcriptional regulator protein, LysR family
YP_972902.1	KEGG: pfl:PFL_1145 hypothetical protein
YP_972903.1	PFAM: OmpA/MotB domain protein; KEGG: tbd:Tbd_0244 probable outer membrane protein
YP_972904.1	PFAM: protein of unknown function DUF924; KEGG: aci:ACIAD3550 hypothetical protein
YP_972905.1	PFAM: Radical SAM domain protein; KEGG: xcb:XC_3736 hypothetical protein
YP_972906.1	KEGG: nar:Saro_2039 uracil-DNA glycosylase superfamily
YP_972907.1	KEGG: rfr:Rfer_2154 ribosomal subunit interface protein, putative
YP_972908.1	PFAM: glutamine amidotransferase class-I; peptidase C26; KEGG: pol:Bpro_4701 peptidase C26
YP_972909.1	PFAM: Integrase, catalytic region; KEGG: bpa:BPP1897 IS1002 transposase
YP_972910.1	PFAM: Spore coat U domain protein; KEGG: bpm:BURPS1710b_1790 hypothetical protein
YP_972911.1	KEGG: bte:BTH_I2679 spore coat protein U domain family
YP_972912.1	KEGG: pen:PSEEN3396 type 1 pili usher pathway chaperone CsuC
YP_972913.1	PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: pfo:Pfl_3669 fimbrial biogenesis outer membrane usher protein
YP_972914.1	PFAM: Spore coat U domain protein; KEGG: bte:BTH_I2676 spore coat protein U domain family
YP_972915.1	KEGG: pol:Bpro_4719 peptidylprolyl isomerase, FKBP-type
YP_972916.1	PFAM: pirin domain protein; Pirin domain protein; KEGG: pol:Bpro_4775 pirin-like
YP_972917.1	KEGG: rso:RS02359 hypothetical protein
YP_972918.1	PFAM: transcription activator, effector binding; KEGG: cef:CE1562 hypothetical protein
YP_972919.1	PFAM: MscS Mechanosensitive ion channel; KEGG: ppu:PP_3360 hypothetical protein
YP_972921.1	PFAM: sulfatase; KEGG: pfo:Pfl_2584 sulfatase
YP_972922.1	PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: ret:RHE_CH02674 probable oxidoreductase protein
YP_972923.1	KEGG: xcb:XC_0268 hypothetical protein
YP_972924.1	PFAM: Exopolysaccharide synthesis, ExoD; KEGG: eli:ELI_11070 hypothetical protein
YP_972925.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; 3-demethylubiquinone-9 3-methyltransferase; KEGG: rfr:Rfer_4110 3-demethylubiquinone-9 3-methyltransferase
YP_972926.1	PFAM: regulatory protein, TetR; KEGG: rme:Rmet_4723 transcriptional regulator, TetR family
YP_972927.1	KEGG: rfr:Rfer_4031 hypothetical protein
YP_972928.1	PFAM: transposase, IS4 family protein; KEGG: bxe:Bxe_C0489 putative transposase IS4
YP_972929.1	KEGG: xac:XAC1506 hypothetical protein
YP_972930.1	KEGG: rfr:Rfer_4005 hypothetical protein
YP_972931.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: ade:Adeh_0453 methyltransferase type 12
YP_972932.1	PFAM: alpha/beta hydrolase fold; KEGG: bpm:BURPS1710b_0554 lactonase
YP_972933.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rfr:Rfer_4015 glyoxalase/bleomycin resistance protein/dioxygenase
YP_972934.1	PFAM: RDD domain containing protein; KEGG: hch:HCH_05731 predicted membrane protein/domain
YP_972935.1	PFAM: filamentation induced by cAMP protein Fic; KEGG: pol:Bpro_0014 filamentation induced by cAMP protein Fic
YP_972936.1	decatenates replicating daughter chromosomes
YP_972937.1	PFAM: nuclear protein SET; SMART: SET-related domain protein; KEGG: rfr:Rfer_3954 nuclear protein SET
YP_972938.1	TIGRFAM: biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; KEGG: pol:Bpro_4716 biotin--acetyl-CoA-carboxylase ligase
YP_972939.1	PFAM: Sporulation domain protein; KEGG: pol:Bpro_4717 putative signal peptide protein
YP_972940.1	PFAM: leucine-rich repeat protein; KEGG: xcb:XC_1553 leucin rich protein
YP_972941.1	KEGG: xcb:XC_1553 leucin rich protein
YP_972942.1	PFAM: N-formylglutamate amidohydrolase; KEGG: pol:Bpro_2708 N-formylglutamate amidohydrolase
YP_972943.1	PFAM: uncharacterized protein UPF0065; KEGG: bbr:BB1948 hypothetical protein
YP_972944.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rme:Rmet_0983 transcriptional regulator, LysR family
YP_972946.1	PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; Two-component sensor kinase N-terminal domain protein; KEGG: rfr:Rfer_3951 periplasmic sensor signal transduction histidine kinase
YP_972947.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pol:Bpro_4687 two component transcriptional regulator, winged helix family
YP_972948.1	PFAM: regulatory protein, MarR; KEGG: pol:Bpro_4686 transcriptional regulator, MarR family
YP_972949.1	KEGG: rfr:Rfer_3948 RecA protein; TIGRFAM: recA protein; PFAM: RecA domain protein; SMART: AAA ATPase
YP_972950.1	KEGG: rfr:Rfer_3947 regulatory protein RecX
YP_972951.1	KEGG: rfr:Rfer_3864 hypothetical protein
YP_972952.1	forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF
YP_972953.1	part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane
YP_972954.1	TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: pol:Bpro_4646 preprotein translocase, YajC subunit
YP_972955.1	Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates
YP_972956.1	PFAM: regulatory protein, AsnC/Lrp family; KEGG: pol:Bpro_4648 transcriptional regulator, AsnC family
YP_972957.1	KEGG: mca:MCA0595 hypothetical protein
YP_972958.1	PFAM: protein of unknown function DUF894, DitE; major facilitator superfamily MFS_1; KEGG: pol:Bpro_0736 protein of unknown function DUF894, DitE
YP_972959.1	KEGG: gbe:GbCGDNIH1_0362 hypothetical protein
YP_972960.1	PFAM: MltA domain protein; 3D domain protein; KEGG: rfr:Rfer_0365 MltA
YP_972961.1	PFAM: OmpA/MotB domain protein; KEGG: rfr:Rfer_0206 OmpA/MotB
YP_972962.1	PFAM: regulatory protein, LuxR; response regulator receiver; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: pol:Bpro_4652 two component transcriptional regulator, LuxR family
YP_972963.1	KEGG: pol:Bpro_4653 signal transduction histidine kinase, nitrogen specific, NtrB; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_972964.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: pol:Bpro_4654 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_972965.1	KEGG: rfr:Rfer_0366 hypothetical protein
YP_972966.1	PFAM: glutamate-ammonia ligase adenylyltransferase; KEGG: rfr:Rfer_0367 glutamate-ammonia-ligase adenylyltransferase
YP_972967.1	TIGRFAM: amino acid adenylation domain; thioester reductase domain; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; phosphopantetheine-binding; Male sterility C-terminal domain; KEGG: bsu:BG11243 probable non-ribosomal peptide synthetase
YP_972968.1	PFAM: UDP-glucuronosyl/UDP-glucosyltransferase; KEGG: bja:bll2692 putative glycosyltransferase
YP_972969.1	PFAM: MbtH domain protein; KEGG: sco:SCO0489 hypothetical protein
YP_972970.1	PFAM: regulatory protein, TetR; KEGG: mca:MCA1598 transcriptional regulator, TetR family
YP_972971.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: rfr:Rfer_4106 RND efflux system, outer membrane lipoprotein, NodT
YP_972972.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rfr:Rfer_4105 secretion protein HlyD
YP_972973.1	PFAM: acriflavin resistance protein; KEGG: dar:Daro_0459 acriflavin resistance protein
YP_972974.1	KEGG: spn:SP1772 cell wall surface anchor family protein
YP_972975.1	KEGG: rfr:Rfer_4051 HD-GYP domain-like
YP_972976.1	PFAM: glutathione peroxidase; KEGG: reu:Reut_A0042 glutathione peroxidase
YP_972977.1	PFAM: glutathione S-transferase, N-terminal domain; glutathione S-transferase, C-terminal domain; KEGG: rfr:Rfer_4050 glutathione S-transferase-like
YP_972978.1	Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide
YP_972979.1	PFAM: YaeQ family protein; KEGG: rfr:Rfer_4048 YaeQ
YP_972980.1	KEGG: pol:Bpro_4663 hypothetical protein
YP_972981.1	PFAM: protein of unknown function DUF1289; KEGG: pol:Bpro_4664 protein of unknown function DUF1289
YP_972982.1	PFAM: Integral membrane protein TerC; KEGG: rfr:Rfer_3943 integral membrane protein TerC
YP_972983.1	KEGG: pol:Bpro_4667 hypothetical protein
YP_972984.1	PFAM: membrane protein of unknown function; KEGG: rfr:Rfer_4042 membrane protein of unknown function
YP_972985.1	PFAM: peptidase M48, Ste24p; KEGG: rfr:Rfer_4041 peptidase M48, Ste24p
YP_972986.1	TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; KEGG: pol:Bpro_4671 molybdenum cofactor biosynthesis protein C
YP_972987.1	KEGG: rfr:Rfer_1264 O-antigen polymerase
YP_972988.1	KEGG: rfr:Rfer_1265 methylation
YP_972989.1	PFAM: Forkhead-associated protein; KEGG: pol:Bpro_4677 FHA domain containing protein
YP_972990.1	PFAM: protein phosphatase 2C domain protein; Stage II sporulation E family protein; KEGG: pol:Bpro_4678 protein serine/threonine phosphatase
YP_972991.1	PFAM: Integral membrane protein TerC; KEGG: reu:Reut_A0532 integral membrane protein TerC
YP_972992.1	Catalyzes the only substrate-level phosphorylation in the TCA cycle
YP_972993.1	catalyzes the interconversion of succinyl-CoA and succinate
YP_972994.1	catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis
YP_972995.1	TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: pol:Bpro_4641 DNA processing protein DprA, putative
YP_972996.1	PFAM: Peptidoglycan-binding LysM; KEGG: rfr:Rfer_3861 peptidoglycan-binding LysM
YP_972997.1	KEGG: rfr:Rfer_3860 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase
YP_972998.1	KEGG: pol:Bpro_0388 putative lipoprotein transmembrane
YP_972999.1	TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: pol:Bpro_4638 methionyl-tRNA formyltransferase
YP_973000.1	PFAM: AzlC family protein; KEGG: pol:Bpro_4637 AzlC-like
YP_973001.1	PFAM: branched-chain amino acid transport; KEGG: pol:Bpro_4636 branched-chain amino acid transport
YP_973002.1	Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway
YP_973003.1	PFAM: PEBP family protein; KEGG: eca:ECA2457 hypothetical protein
YP_973004.1	PFAM: protein of unknown function DUF6, transmembrane; KEGG: pol:Bpro_4618 protein of unknown function DUF6, transmembrane
YP_973005.1	type 2 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase
YP_973006.1	PFAM: acyltransferase 3; KEGG: bur:Bcep18194_B2871 acyltransferase 3
YP_973007.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: bpe:BP2849 putative LysR-family transcriptional regulator
YP_973008.1	PFAM: uncharacterized protein UPF0065; KEGG: bpa:BPP4092 hypothetical protein
YP_973009.1	KEGG: bbr:BB4562 hypothetical protein
YP_973010.1	PFAM: small multidrug resistance protein; KEGG: bmb:BruAb1_0937 QacH, quaternary ammonium compound-resistance protein
YP_973011.1	PFAM: protein of unknown function DUF6, transmembrane; KEGG: bxe:Bxe_A0745 drug/metabolite efflux pump, DME (10TM) family, DMT superfamily
YP_973012.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rfr:Rfer_1480 methyl-accepting chemotaxis sensory transducer
YP_973013.1	KEGG: eli:ELI_01990 hypothetical protein
YP_973014.1	PFAM: protein of unknown function DUF1501; KEGG: eli:ELI_01985 hypothetical protein
YP_973016.1	KEGG: pst:PSPTO_0478 hypothetical protein
YP_973017.1	TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter-related protein; KEGG: pol:Bpro_4568 excinuclease ABC, A subunit
YP_973018.1	PFAM: adenylylsulfate kinase; KEGG: net:Neut_0164 sulfate adenylyltransferase., adenylyl-sulfate kinase
YP_973019.1	PFAM: ubiquitin; KEGG: ptr:454140 LOC454140
YP_973020.1	PFAM: major facilitator superfamily MFS_1; KEGG: pol:Bpro_4567 major facilitator superfamily MFS_1
YP_973021.1	PFAM: Cl- channel, voltage-gated family protein; KEGG: rfr:Rfer_1155 Cl-channel, voltage gated
YP_973022.1	TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: pol:Bpro_4565 single-strand binding protein
YP_973023.1	KEGG: pol:Bpro_4848 protein of unknown function DUF599
YP_973024.1	PFAM: protein of unknown function DUF395, YeeE/YedE; KEGG: pol:Bpro_4847 protein of unknown function DUF395, YeeE/YedE
YP_973025.1	PFAM: protein of unknown function DUF395, YeeE/YedE; KEGG: pol:Bpro_4846 protein of unknown function DUF395, YeeE/YedE
YP_973026.1	PFAM: regulatory protein, ArsR; KEGG: pol:Bpro_4845 transcriptional regulator, ArsR family
YP_973027.1	PFAM: beta-lactamase domain protein; KEGG: pol:Bpro_4844 beta-lactamase-like
YP_973028.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: atc:AGR_C_1815 hypothetical protein
YP_973029.1	TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: dar:Daro_1762 L-lactate permease
YP_973030.1	catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs
YP_973031.1	PFAM: NUDIX hydrolase; KEGG: pol:Bpro_4549 NUDIX hydrolase
YP_973032.1	PFAM: protein of unknown function DUF6, transmembrane; KEGG: rme:Rmet_5748 protein of unknown function DUF6, transmembrane
YP_973033.1	PFAM: LysR, substrate-binding; KEGG: atc:AGR_C_3765 hypothetical protein
YP_973034.1	KEGG: xcv:XCV0572 Xanthomonas outer protein X
YP_973035.1	PFAM: GCN5-related N-acetyltransferase; KEGG: reu:Reut_A3124 GCN5-related N-acetyltransferase
YP_973036.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase, HAMP region domain protein; KEGG: cvi:CV3252 hypothetical protein
YP_973037.2	catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine
YP_973038.1	KEGG: psb:Psyr_3532 PAS; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; SMART: PAC repeat-containing protein
YP_973039.1	KEGG: reu:Reut_B3732 hypothetical protein
YP_973040.1	KEGG: mca:MCA0117 hypothetical protein
YP_973041.1	PFAM: amine oxidase; KEGG: dar:Daro_3715 twin-arginine translocation pathway signal
YP_973042.1	catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine
YP_973043.1	KEGG: nfa:nfa31650 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE, N-terminal domain protein; Ketopantoate reductase ApbA/PanE, C-terminal domain protein
YP_973044.1	PFAM: protein of unknown function DUF350; KEGG: aba:Acid345_0110 protein of unknown function DUF350
YP_973045.1	KEGG: rme:Rmet_3458 putative transmembrane protein
YP_973046.1	KEGG: dar:Daro_3752 putative transmembrane protein
YP_973047.1	KEGG: pol:Bpro_4856 hypothetical protein
YP_973048.1	PFAM: flagellar basal body rod protein; KEGG: xac:XAC2539 hypothetical protein
YP_973049.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: pol:Bpro_4285 transcriptional regulator, LysR family
YP_973050.1	catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate
YP_973051.1	PFAM: ThiJ/PfpI domain protein; KEGG: pol:Bpro_4238 DJ-1/PfpI family protein
YP_973052.1	TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: bur:Bcep18194_B1697 methylmalonate-semialdehyde dehydrogenase
YP_973053.1	KEGG: cel:F47B8.5 Hypothetical protein F47B8.5
YP_973054.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rfr:Rfer_4030 diguanylate cyclase
YP_973055.1	PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: bxe:Bxe_B2567 transcriptional regulator, GntR family
YP_973056.1	KEGG: bxe:Bxe_B2566 ABC branched chain amino acid family transporter, periplasmic ligand binding protein
YP_973057.1	PFAM: inner-membrane translocator; KEGG: bxe:Bxe_B2564 ABC branched chain amino acid family transporter, inner membrane subunit
YP_973058.1	PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: bcn:Bcen_5725 ABC transporter-related protein
YP_973059.1	PFAM: ABC transporter-related protein; SMART: AAA ATPase; KEGG: bxe:Bxe_B2562 ABC branched chain amino acid family transporter, ATPase subunit
YP_973060.1	KEGG: bcn:Bcen_5723 amidase, hydantoinase/carbamoylase; TIGRFAM: amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20
YP_973061.1	PFAM: uncharacterized conserved protein UCP012702; MlrC domain protein; KEGG: bxe:Bxe_B2560 hypothetical protein
YP_973064.1	NAD-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; does not decarboxylate oxaloacetate
YP_973065.1	PFAM: guanine-specific ribonuclease N1 and T1; KEGG: pol:Bpro_4859 guanyl-specific ribonuclease SA
YP_973066.1	KEGG: pol:Bpro_4860 hypothetical protein
YP_973067.1	catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin
YP_973068.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: pol:Bpro_4862 PpiC-type peptidyl-prolyl cis-trans isomerase
YP_973069.1	PFAM: OstA family protein; Organic solvent tolerance protein; KEGG: pol:Bpro_4863 organic solvent tolerance protein
YP_973070.1	PFAM: aminoglycoside phosphotransferase; KEGG: rfr:Rfer_0099 aminoglycoside phosphotransferase
YP_973071.1	in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase
YP_973073.1	KEGG: cvi:CV0860 hypothetical protein
YP_973074.1	PFAM: SMC domain protein; KEGG: bpm:BURPS1710b_2543 hypothetical protein
YP_973075.1	PFAM: major facilitator superfamily MFS_1; KEGG: eba:ebA5710 putative MFS permease family protein
YP_973076.1	PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: pol:Bpro_4868 peptidase M20
YP_973077.1	SMART: helix-turn-helix- domain containing protein, AraC type; KEGG: rfr:Rfer_0584 transcriptional regulator, AraC family
YP_973078.1	TIGRFAM: ethanolamine transproter; PFAM: amino acid permease-associated region; KEGG: rpd:RPD_2980 ethanolamine permease
YP_973079.1	PFAM: Ethanolamine ammonia lyase large subunit; KEGG: rpd:RPD_2981 ethanolamine ammonia lyase large subunit
YP_973080.1	catalyzes the formation of acetaldehyde from ethanolamine
YP_973081.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: nwi:Nwi_2429 diguanylate cyclase
YP_973082.1	TIGRFAM: methionine biosynthesis protein MetW; PFAM: Methionine biosynthesis MetW; Methyltransferase type 11; Methyltransferase type 12; KEGG: rfr:Rfer_0405 methionine biosynthesis MetW
YP_973083.1	Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine
YP_973084.1	PFAM: protein of unknown function UPF0016; KEGG: rfr:Rfer_0520 protein of unknown function UPF0016
YP_973085.1	PFAM: RNP-1 like RNA-binding protein; KEGG: pol:Bpro_4894 RNA-binding region RNP-1 (RNA recognition motif)
YP_973086.1	PFAM: RNP-1 like RNA-binding protein; KEGG: pol:Bpro_4894 RNA-binding region RNP-1 (RNA recognition motif)
YP_973087.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pol:Bpro_4895 short-chain dehydrogenase/reductase SDR
YP_973088.1	PFAM: protein of unknown function DUF1239; KEGG: rfr:Rfer_4235 protein of unknown function DUF1239
YP_973089.1	TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; KEGG: pol:Bpro_4897 phosphatase KdsC
YP_973090.1	KEGG: rfr:Rfer_4237 KpsF/GutQ family protein; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS)
YP_973091.1	TIGRFAM: potassium efflux system protein; PFAM: TrkA-N domain protein; TrkA-C domain protein; sodium/hydrogen exchanger; KEGG: pol:Bpro_4900 potassium efflux system protein
YP_973092.1	catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis
YP_973093.1	PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; PepSY-associated TM helix domain protein; flavodoxin/nitric oxide synthase; KEGG: pen:PSEEN1028 sulfite reductase flavoprotein alpha-component; iron-regulated membrane protein
YP_973094.1	KEGG: rfr:Rfer_4240 hypothetical protein
YP_973095.1	PFAM: cyclic nucleotide-binding; KEGG: pol:Bpro_4903 cyclic nucleotide-binding domain (cNMP-BD) protein
YP_973096.1	in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE
YP_973097.1	PFAM: extracellular solute-binding protein, family 5; KEGG: bpe:BP3237 putative binding-protein-dependent transport protein (periplasmic)
YP_973098.1	PFAM: 60 kDa inner membrane insertion protein; KEGG: pol:Bpro_4905 60 kDa inner membrane insertion protein
YP_973099.1	PFAM: protein of unknown function DUF37; KEGG: rfr:Rfer_4243 protein of unknown function DUF37
YP_973100.1	KEGG: pol:Bpro_4907 hypothetical protein
YP_973101.1	in Escherichia coli transcription of this gene is enhanced by polyamines