-- dump date 20140618_192201 -- class Genbank::CDS -- table cds_note -- id note YP_008041133.1 COG0593 ATPase involved in DNA replication initiation YP_008041134.1 COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) YP_008041135.1 COG1195 Recombinational DNA repair ATPase (RecF pathway) YP_008041136.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_008041137.1 COG0346 Lactoylglutathione lyase and related lyases YP_008041138.1 COG2378 Predicted transcriptional regulator YP_008041139.1 COG0071 Molecular chaperone (small heat shock protein) YP_008041140.1 COG0071 Molecular chaperone (small heat shock protein) YP_008041141.1 COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase YP_008041143.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_008041144.1 COG0477 Permeases of the major facilitator superfamily YP_008041145.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008041146.1 COG2205 Osmosensitive K+ channel histidine kinase YP_008041147.1 COG2156 K+-transporting ATPase, c chain YP_008041148.1 COG2216 High-affinity K+ transport system, ATPase chain B YP_008041149.1 COG2060 K+-transporting ATPase, A chain YP_008041151.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_008041152.1 COG0642 Signal transduction histidine kinase YP_008041153.1 COG0841 Cation/multidrug efflux pump YP_008041154.1 COG0845 Membrane-fusion protein YP_008041155.1 COG1309 Transcriptional regulator YP_008041157.1 COG0469 Pyruvate kinase YP_008041158.1 COG2271 Sugar phosphate permease YP_008041159.1 COG1840 ABC-type Fe3+ transport system, periplasmic component YP_008041160.1 COG4192 Signal transduction histidine kinase regulating phosphoglycerate transport system YP_008041161.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_008041163.1 COG0561 Predicted hydrolases of the HAD superfamily YP_008041164.1 COG2267 Lysophospholipase YP_008041165.1 COG0110 Acetyltransferase (isoleucine patch superfamily) YP_008041166.1 COG0566 rRNA methylases YP_008041167.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_008041168.1 COG1758 DNA-directed RNA polymerase, subunit K/omega YP_008041169.1 COG0194 Guanylate kinase YP_008041170.1 COG0859 ADP-heptose:LPS heptosyltransferase YP_008041171.1 COG0515 Serine/threonine protein kinase YP_008041172.1 COG2202 FOG: PAS/PAC domain YP_008041173.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_008041176.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_008041177.1 COG0583 Transcriptional regulator YP_008041178.1 COG0180 Tryptophanyl-tRNA synthetase YP_008041179.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins YP_008041180.1 COG3007 Uncharacterized paraquat-inducible protein B YP_008041181.1 COG2199 FOG: GGDEF domain YP_008041182.1 COG1528 Ferritin-like protein YP_008041183.1 COG2081 Predicted flavoproteins YP_008041185.1 COG2801 Transposase and inactivated derivatives YP_008041187.1 COG1396 Predicted transcriptional regulators YP_008041188.1 COG3550 Uncharacterized protein related to capsule biosynthesis enzymes YP_008041190.1 COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases YP_008041191.1 COG0613 Predicted metal-dependent phosphoesterases (PHP family) YP_008041192.1 COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen YP_008041193.1 COG0732 Restriction endonuclease S subunits YP_008041194.1 COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components YP_008041195.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_008041197.1 COG0477 Permeases of the major facilitator superfamily YP_008041198.1 COG1280 Putative threonine efflux protein YP_008041204.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_008041205.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008041206.1 COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] YP_008041207.1 COG3275 Putative regulator of cell autolysis YP_008041208.1 COG3279 Response regulator of the LytR/AlgR family YP_008041209.1 COG0477 Permeases of the major facilitator superfamily YP_008041210.1 COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) YP_008041211.1 COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase YP_008041213.1 COG3329 Predicted permease YP_008041214.1 COG0583 Transcriptional regulator YP_008041215.1 COG4206 Outer membrane cobalamin receptor protein YP_008041216.1 COG0796 Glutamate racemase YP_008041217.1 COG0724 RNA-binding proteins (RRM domain) YP_008041219.1 COG0402 Cytosine deaminase and related metal-dependent hydrolases YP_008041220.1 COG0239 Integral membrane protein possibly involved in chromosome condensation YP_008041221.1 COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis YP_008041222.1 COG3165 Uncharacterized protein conserved in bacteria YP_008041223.1 COG0661 Predicted unusual protein kinase YP_008041224.1 COG1826 Sec-independent protein secretion pathway components YP_008041225.1 COG1826 Sec-independent protein secretion pathway components YP_008041226.1 COG0805 Sec-independent protein secretion pathway component TatC YP_008041227.1 COG0084 Mg-dependent DNase YP_008041228.1 COG0113 Delta-aminolevulinic acid dehydratase YP_008041229.1 COG0339 Zn-dependent oligopeptidases YP_008041230.1 COG2199 FOG: GGDEF domain YP_008041231.1 COG0500 SAM-dependent methyltransferases YP_008041232.1 COG4568 Transcriptional antiterminator YP_008041234.1 COG0248 Exopolyphosphatase YP_008041235.1 COG0513 Superfamily II DNA and RNA helicases YP_008041236.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_008041237.1 COG1158 Transcription termination factor YP_008041239.1 COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases YP_008041240.1 COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases YP_008041241.1 COG2960 Uncharacterized protein conserved in bacteria YP_008041243.1 COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) YP_008041244.1 COG0607 Rhodanese-related sulfurtransferase YP_008041245.1 COG1280 Putative threonine efflux protein YP_008041246.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_008041247.1 COG0410 ABC-type branched-chain amino acid transport systems, ATPase component YP_008041248.1 COG0411 ABC-type branched-chain amino acid transport systems, ATPase component YP_008041249.1 COG4177 ABC-type branched-chain amino acid transport system, permease component YP_008041250.1 COG0559 Branched-chain amino acid ABC-type transport system, permease components YP_008041251.1 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component YP_008041252.1 COG1609 Transcriptional regulators YP_008041253.1 COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases YP_008041254.1 COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific YP_008041255.1 COG2188 Transcriptional regulators YP_008041256.1 COG3604 Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains YP_008041257.1 COG0426 Uncharacterized flavoproteins YP_008041258.1 COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases YP_008041259.1 COG3615 Uncharacterized protein/domain, possibly involved in tellurite resistance YP_008041260.1 COG0348 Polyferredoxin YP_008041261.1 COG0814 Amino acid permeases YP_008041265.1 COG0645 Predicted kinase YP_008041268.1 COG0751 Glycyl-tRNA synthetase, beta subunit YP_008041269.1 COG0752 Glycyl-tRNA synthetase, alpha subunit YP_008041270.1 COG2818 3-methyladenine DNA glycosylase YP_008041271.1 COG1335 Amidases related to nicotinamidase YP_008041272.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_008041273.1 COG0251 Putative translation initiation inhibitor, yjgF family YP_008041274.1 COG0425 Predicted redox protein, regulator of disulfide bond formation YP_008041276.1 COG1653 ABC-type sugar transport system, periplasmic component YP_008041277.1 COG0642 Signal transduction histidine kinase YP_008041278.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008041279.1 COG0183 Acetyl-CoA acetyltransferase YP_008041280.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_008041281.1 COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases YP_008041282.1 COG0006 Xaa-Pro aminopeptidase YP_008041283.1 COG1739 Uncharacterized conserved protein YP_008041284.1 COG0168 Trk-type K+ transport systems, membrane components YP_008041285.1 COG4635 Flavodoxin YP_008041286.1 COG1042 Acyl-CoA synthetase (NDP forming) YP_008041288.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008041289.1 COG0583 Transcriptional regulator YP_008041290.1 COG0059 Ketol-acid reductoisomerase YP_008041291.1 COG0166 Glucose-6-phosphate isomerase YP_008041294.1 COG0668 Small-conductance mechanosensitive channel YP_008041295.1 COG1309 Transcriptional regulator YP_008041296.1 COG0756 dUTPase YP_008041297.1 COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase YP_008041298.1 COG2003 DNA repair proteins YP_008041299.1 COG0227 Ribosomal protein L28 YP_008041300.1 COG0267 Ribosomal protein L33 YP_008041302.1 COG0266 Formamidopyrimidine-DNA glycosylase YP_008041303.1 COG2990 Uncharacterized protein conserved in bacteria YP_008041304.1 COG0669 Phosphopantetheine adenylyltransferase YP_008041305.1 COG0859 ADP-heptose:LPS heptosyltransferase YP_008041306.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_008041307.1 COG0859 ADP-heptose:LPS heptosyltransferase YP_008041308.1 COG1519 3-deoxy-D-manno-octulosonic-acid transferase YP_008041309.1 COG3037 Uncharacterized protein conserved in bacteria YP_008041310.1 COG3414 Phosphotransferase system, galactitol-specific IIB component YP_008041311.1 COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) YP_008041312.1 COG1609 Transcriptional regulators YP_008041313.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_008041317.1 COG1580 Flagellar basal body-associated protein YP_008041318.1 COG3161 4-hydroxybenzoate synthetase (chorismate lyase) YP_008041319.1 COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases YP_008041320.1 COG2937 Glycerol-3-phosphate O-acyltransferase YP_008041321.1 COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) YP_008041324.1 COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems YP_008041325.1 COG0534 Na+-driven multidrug efflux pump YP_008041326.1 COG0219 Predicted rRNA methylase (SpoU class) YP_008041327.1 COG0642 Signal transduction histidine kinase YP_008041328.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008041329.1 COG0053 Predicted Co/Zn/Cd cation transporters YP_008041330.1 COG1045 Serine acetyltransferase YP_008041332.1 COG3074 Uncharacterized protein conserved in bacteria YP_008041333.1 COG3155 Uncharacterized protein involved in an early stage of isoprenoid biosynthesis YP_008041334.1 COG0258 5'-3' exonuclease (including N-terminal domain of PolI) YP_008041335.1 COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily YP_008041336.1 COG1609 Transcriptional regulators YP_008041337.1 COG3250 Beta-galactosidase/beta-glucuronidase YP_008041338.1 COG2731 Beta-galactosidase, beta subunit YP_008041339.1 COG0531 Amino acid transporters YP_008041340.1 COG0073 EMAP domain YP_008041341.1 COG0531 Amino acid transporters YP_008041342.1 COG0385 Predicted Na+-dependent transporter YP_008041343.1 COG1262 Uncharacterized conserved protein YP_008041345.1 COG0627 Predicted esterase YP_008041346.1 COG1062 Zn-dependent alcohol dehydrogenases, class III YP_008041347.1 COG0583 Transcriptional regulator YP_008041348.1 COG1079 Uncharacterized ABC-type transport system, permease component YP_008041349.1 COG4603 ABC-type uncharacterized transport system, permease component YP_008041350.1 COG3845 ABC-type uncharacterized transport systems, ATPase components YP_008041351.1 COG1744 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein YP_008041352.1 COG0210 Superfamily I DNA and RNA helicases YP_008041353.1 COG1943 Transposase and inactivated derivatives YP_008041354.1 COG0583 Transcriptional regulator YP_008041357.1 COG3812 Uncharacterized protein conserved in bacteria YP_008041358.1 COG3832 Uncharacterized conserved protein YP_008041359.1 COG3837 Uncharacterized conserved protein, contains double-stranded beta-helix domain YP_008041362.1 COG0583 Transcriptional regulator YP_008041363.1 COG1280 Putative threonine efflux protein YP_008041364.1 COG2391 Predicted transporter component YP_008041365.1 COG0474 Cation transport ATPase YP_008041366.1 COG1280 Putative threonine efflux protein YP_008041367.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_008041368.1 COG2962 Predicted permeases YP_008041370.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_008041371.1 COG1396 Predicted transcriptional regulators YP_008041372.1 COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_008041373.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_008041374.1 COG0518 GMP synthase - Glutamine amidotransferase domain YP_008041375.1 COG0686 Alanine dehydrogenase YP_008041376.1 COG0524 Sugar kinases, ribokinase family YP_008041377.1 COG1959 Predicted transcriptional regulator YP_008041378.1 COG1145 Ferredoxin YP_008041380.1 COG1322 Uncharacterized protein conserved in bacteria YP_008041381.1 COG0168 Trk-type K+ transport systems, membrane components YP_008041382.1 COG0569 K+ transport systems, NAD-binding component YP_008041383.1 COG0144 tRNA and rRNA cytosine-C5-methylases YP_008041384.1 COG0223 Methionyl-tRNA formyltransferase YP_008041385.1 COG0242 N-formylmethionyl-tRNA deformylase YP_008041386.1 COG1652 Uncharacterized protein containing LysM domain YP_008041387.1 COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake YP_008041388.1 COG2922 Uncharacterized protein conserved in bacteria YP_008041389.1 COG0551 Zn-finger domain associated with topoisomerase type I YP_008041390.1 COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase YP_008041391.1 COG0009 Putative translation factor (SUA5) YP_008041392.1 COG0408 Coproporphyrinogen III oxidase YP_008041393.1 COG0169 Shikimate 5-dehydrogenase YP_008041395.1 COG0218 Predicted GTPase YP_008041396.1 COG2863 Cytochrome c553 YP_008041398.1 COG3078 Uncharacterized protein conserved in bacteria YP_008041400.1 COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases YP_008041401.1 COG1816 Adenosine deaminase YP_008041402.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_008041403.1 COG3852 Signal transduction histidine kinase, nitrogen specific YP_008041405.1 COG0174 Glutamine synthetase YP_008041406.1 COG1217 Predicted membrane GTPase involved in stress response YP_008041407.1 COG1295 Predicted membrane protein YP_008041408.1 COG1490 D-Tyr-tRNAtyr deacylase YP_008041409.1 COG0421 Spermidine synthase YP_008041410.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_008041412.1 COG1200 RecG-like helicase YP_008041413.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_008041414.1 COG2610 H+/gluconate symporter and related permeases YP_008041415.1 COG3265 Gluconate kinase YP_008041416.1 COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase YP_008041417.1 COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase YP_008041418.1 COG1609 Transcriptional regulators YP_008041419.1 COG1357 Uncharacterized low-complexity proteins YP_008041420.1 COG4942 Membrane-bound metallopeptidase YP_008041421.1 COG0696 Phosphoglyceromutase YP_008041422.1 COG0607 Rhodanese-related sulfurtransferase YP_008041423.1 COG1952 Preprotein translocase subunit SecB YP_008041424.1 COG0240 Glycerol-3-phosphate dehydrogenase YP_008041425.1 COG0316 Uncharacterized conserved protein YP_008041426.1 COG1040 Predicted amidophosphoribosyltransferases YP_008041427.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_008041428.1 COG1749 Flagellar hook protein FlgE YP_008041431.1 COG2183 Transcriptional accessory protein YP_008041432.1 COG0782 Transcription elongation factor YP_008041433.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008041434.1 COG0642 Signal transduction histidine kinase YP_008041435.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_008041436.1 COG0051 Ribosomal protein S10 YP_008041437.1 COG0087 Ribosomal protein L3 YP_008041438.1 COG0088 Ribosomal protein L4 YP_008041439.1 COG0089 Ribosomal protein L23 YP_008041440.1 COG0090 Ribosomal protein L2 YP_008041441.1 COG0185 Ribosomal protein S19 YP_008041442.1 COG0091 Ribosomal protein L22 YP_008041443.1 COG0092 Ribosomal protein S3 YP_008041444.1 COG0197 Ribosomal protein L16/L10E YP_008041445.1 COG0255 Ribosomal protein L29 YP_008041446.1 COG0186 Ribosomal protein S17 YP_008041447.1 COG0093 Ribosomal protein L14 YP_008041448.1 COG0198 Ribosomal protein L24 YP_008041449.1 COG0094 Ribosomal protein L5 YP_008041450.1 COG0199 Ribosomal protein S14 YP_008041451.1 COG0096 Ribosomal protein S8 YP_008041452.1 COG0097 Ribosomal protein L6P/L9E YP_008041453.1 COG0256 Ribosomal protein L18 YP_008041454.1 COG0098 Ribosomal protein S5 YP_008041455.1 COG1841 Ribosomal protein L30/L7E YP_008041456.1 COG0200 Ribosomal protein L15 YP_008041457.1 COG0201 Preprotein translocase subunit SecY YP_008041458.1 COG0257 Ribosomal protein L36 YP_008041459.1 COG0099 Ribosomal protein S13 YP_008041460.1 COG0100 Ribosomal protein S11 YP_008041461.1 COG0522 Ribosomal protein S4 and related proteins YP_008041462.1 COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit YP_008041463.1 COG0203 Ribosomal protein L17 YP_008041466.1 COG3094 Uncharacterized protein conserved in bacteria YP_008041467.1 COG0475 Kef-type K+ transport systems, membrane components YP_008041468.1 COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) YP_008041469.1 COG0583 Transcriptional regulator YP_008041470.1 COG4221 Short-chain alcohol dehydrogenase of unknown specificity YP_008041472.1 COG3019 Predicted metal-binding protein YP_008041473.1 COG1770 Protease II YP_008041474.1 COG2358 TRAP-type uncharacterized transport system, periplasmic component YP_008041475.1 COG4666 TRAP-type uncharacterized transport system, fused permease components YP_008041478.1 COG3714 Predicted membrane protein YP_008041479.1 COG0477 Permeases of the major facilitator superfamily YP_008041480.1 COG1566 Multidrug resistance efflux pump YP_008041481.1 COG0583 Transcriptional regulator YP_008041483.1 COG1301 Na+/H+-dicarboxylate symporters YP_008041485.1 COG2095 Multiple antibiotic transporter YP_008041486.1 COG0583 Transcriptional regulator YP_008041487.1 COG1826 Sec-independent protein secretion pathway components YP_008041488.1 COG3691 Uncharacterized protein conserved in bacteria YP_008041489.1 COG4623 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein YP_008041490.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_008041491.1 COG1398 Fatty-acid desaturase YP_008041492.1 COG1309 Transcriptional regulator YP_008041494.1 COG3776 Predicted membrane protein YP_008041495.1 COG0742 N6-adenine-specific methylase YP_008041498.1 COG0552 Signal recognition particle GTPase YP_008041499.1 COG2884 Predicted ATPase involved in cell division YP_008041500.1 COG2177 Cell division protein YP_008041501.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_008041502.1 COG0288 Carbonic anhydrase YP_008041503.1 COG2188 Transcriptional regulators YP_008041504.1 COG1228 Imidazolonepropionase and related amidohydrolases YP_008041505.1 COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family YP_008041506.1 COG2987 Urocanate hydratase YP_008041507.1 COG2986 Histidine ammonia-lyase YP_008041508.1 COG0387 Ca2+/H+ antiporter YP_008041509.1 COG2200 FOG: EAL domain YP_008041510.1 COG2199 FOG: GGDEF domain YP_008041511.1 COG2515 1-aminocyclopropane-1-carboxylate deaminase YP_008041516.1 COG4796 Type II secretory pathway, component HofQ YP_008041517.1 COG3267 Type II secretory pathway, component ExeA (predicted ATPase) YP_008041518.1 COG0457 FOG: TPR repeat YP_008041519.1 COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB YP_008041520.1 COG1459 Type II secretory pathway, component PulF YP_008041526.1 COG2165 Type II secretory pathway, pseudopilin PulG YP_008041529.1 COG1077 Actin-like ATPase involved in cell morphogenesis YP_008041530.1 COG1792 Cell shape-determining protein YP_008041531.1 COG2891 Cell shape-determining protein YP_008041532.1 COG0424 Nucleotide-binding protein implicated in inhibition of septum formation YP_008041533.1 COG1530 Ribonucleases G and E YP_008041534.1 COG3164 Predicted membrane protein YP_008041536.1 COG0388 Predicted amidohydrolase YP_008041537.1 COG0312 Predicted Zn-dependent proteases and their inactivated homologs YP_008041538.1 COG1737 Transcriptional regulators YP_008041540.1 COG3203 Outer membrane protein (porin) YP_008041541.1 COG1264 Phosphotransferase system IIB components YP_008041542.1 COG2103 Predicted sugar phosphate isomerase YP_008041544.1 COG2095 Multiple antibiotic transporter YP_008041545.1 COG0477 Permeases of the major facilitator superfamily YP_008041546.1 COG2102 Predicted ATPases of PP-loop superfamily YP_008041547.1 COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain YP_008041548.1 COG0642 Signal transduction histidine kinase YP_008041549.1 COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase) YP_008041550.1 COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) YP_008041551.1 COG2202 FOG: PAS/PAC domain YP_008041552.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_008041554.1 COG3700 Acid phosphatase (class B) YP_008041555.1 COG2321 Predicted metalloprotease YP_008041557.1 COG1639 Predicted signal transduction protein YP_008041558.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_008041559.1 COG4886 Leucine-rich repeat (LRR) protein YP_008041561.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008041562.1 COG3539 P pilus assembly protein, pilin FimA YP_008041563.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_008041564.1 COG3344 Retron-type reverse transcriptase YP_008041566.1 COG3121 P pilus assembly protein, chaperone PapD YP_008041567.1 COG3188 P pilus assembly protein, porin PapC YP_008041568.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_008041570.1 COG3171 Uncharacterized protein conserved in bacteria YP_008041573.1 COG3311 Predicted transcriptional regulator YP_008041575.1 COG0582 Integrase YP_008041577.1 COG0025 NhaP-type Na+/H+ and K+/H+ antiporters YP_008041578.1 COG0646 Methionine synthase I (cobalamin-dependent), methyltransferase domain YP_008041579.1 COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) YP_008041580.1 COG1114 Branched-chain amino acid permeases YP_008041581.1 COG0642 Signal transduction histidine kinase YP_008041582.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008041586.1 COG0422 Thiamine biosynthesis protein ThiC YP_008041587.1 COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase YP_008041588.1 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 YP_008041589.1 COG2104 Sulfur transfer protein involved in thiamine biosynthesis YP_008041590.1 COG2022 Uncharacterized enzyme of thiazole biosynthesis YP_008041591.1 COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes YP_008041592.1 COG4694 Uncharacterized protein conserved in bacteria YP_008041593.1 COG3417 Collagen-binding surface adhesin SpaP (antigen I/II family) YP_008041594.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_008041596.1 COG2199 FOG: GGDEF domain YP_008041597.1 COG0814 Amino acid permeases YP_008041598.1 COG3932 Uncharacterized ABC-type transport system, permease components YP_008041600.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_008041602.1 COG1733 Predicted transcriptional regulators YP_008041603.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_008041604.1 COG4337 Uncharacterized protein conserved in bacteria YP_008041605.1 COG3274 Uncharacterized protein conserved in bacteria YP_008041606.1 COG3295 Uncharacterized protein conserved in bacteria YP_008041607.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008041608.1 COG2984 ABC-type uncharacterized transport system, periplasmic component YP_008041609.1 COG3203 Outer membrane protein (porin) YP_008041610.1 COG1494 Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins YP_008041611.1 COG0727 Predicted Fe-S-cluster oxidoreductase YP_008041612.1 COG3071 Uncharacterized enzyme of heme biosynthesis YP_008041613.1 COG2959 Uncharacterized enzyme of heme biosynthesis YP_008041614.1 COG1587 Uroporphyrinogen-III synthase YP_008041615.1 COG0181 Porphobilinogen deaminase YP_008041616.1 COG3072 Adenylate cyclase YP_008041617.1 COG0400 Predicted esterase YP_008041618.1 COG1965 Protein implicated in iron transport, frataxin homolog YP_008041619.1 COG0019 Diaminopimelate decarboxylase YP_008041620.1 COG0253 Diaminopimelate epimerase YP_008041621.1 COG3159 Uncharacterized protein conserved in bacteria YP_008041622.1 COG4973 Site-specific recombinase XerC YP_008041623.1 COG1011 Predicted hydrolase (HAD superfamily) YP_008041625.1 COG0668 Small-conductance mechanosensitive channel YP_008041627.1 COG2071 Predicted glutamine amidotransferases YP_008041628.1 COG0561 Predicted hydrolases of the HAD superfamily YP_008041629.1 COG1315 Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain YP_008041630.1 COG0845 Membrane-fusion protein YP_008041631.1 COG1131 ABC-type multidrug transport system, ATPase component YP_008041632.1 COG0842 ABC-type multidrug transport system, permease component YP_008041633.1 COG0842 ABC-type multidrug transport system, permease component YP_008041634.1 COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA YP_008041635.1 COG2206 HD-GYP domain YP_008041636.1 COG1897 Homoserine trans-succinylase YP_008041637.1 COG2453 Predicted protein-tyrosine phosphatase YP_008041638.1 COG1522 Transcriptional regulators YP_008041639.1 COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily YP_008041641.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008041642.1 COG0366 Glycosidases YP_008041643.1 COG1285 Uncharacterized membrane protein YP_008041644.1 COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) YP_008041645.1 COG0456 Acetyltransferases YP_008041647.1 COG4221 Short-chain alcohol dehydrogenase of unknown specificity YP_008041648.1 COG4690 Dipeptidase YP_008041651.1 COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family YP_008041652.1 COG0625 Glutathione S-transferase YP_008041653.1 COG2873 O-acetylhomoserine sulfhydrylase YP_008041655.1 COG4533 ABC-type uncharacterized transport system, periplasmic component YP_008041656.1 COG0824 Predicted thioesterase YP_008041659.1 COG1075 Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold YP_008041661.1 COG0605 Superoxide dismutase YP_008041662.1 COG2949 Uncharacterized membrane protein YP_008041667.1 COG3188 P pilus assembly protein, porin PapC YP_008041668.1 COG3121 P pilus assembly protein, chaperone PapD YP_008041670.1 COG3539 P pilus assembly protein, pilin FimA YP_008041671.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008041672.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_008041673.1 COG1441 O-succinylbenzoate synthase YP_008041674.1 COG0447 Dihydroxynaphthoic acid synthase YP_008041675.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_008041676.1 COG1165 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase YP_008041677.1 COG1169 Isochorismate synthase YP_008041678.1 COG1575 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_008041680.1 COG3182 Uncharacterized iron-regulated membrane protein YP_008041682.1 COG0727 Predicted Fe-S-cluster oxidoreductase YP_008041683.1 COG0513 Superfamily II DNA and RNA helicases YP_008041684.1 COG1972 Nucleoside permease YP_008041685.1 COG1988 Predicted membrane-bound metal-dependent hydrolases YP_008041686.1 COG3658 Cytochrome b YP_008041687.1 COG5591 Uncharacterized conserved protein YP_008041688.1 COG1671 Uncharacterized protein conserved in bacteria YP_008041689.1 COG0598 Mg2+ and Co2+ transporters YP_008041690.1 COG0668 Small-conductance mechanosensitive channel YP_008041692.1 COG2214 DnaJ-class molecular chaperone YP_008041693.1 COG0025 NhaP-type Na+/H+ and K+/H+ antiporters YP_008041694.1 COG3722 Transcriptional regulator YP_008041695.1 COG0246 Mannitol-1-phosphate/altronate dehydrogenases YP_008041696.1 COG2213 Phosphotransferase system, mannitol-specific IIBC component YP_008041697.1 COG2311 Predicted membrane protein YP_008041698.1 COG1309 Transcriptional regulator YP_008041699.1 COG4776 Exoribonuclease II YP_008041700.1 COG0583 Transcriptional regulator YP_008041701.1 COG3916 N-acyl-L-homoserine lactone synthetase YP_008041702.1 COG2771 DNA-binding HTH domain-containing proteins YP_008041703.1 COG1279 Lysine efflux permease YP_008041704.1 COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases YP_008041705.1 COG3133 Outer membrane lipoprotein YP_008041706.1 COG0456 Acetyltransferases YP_008041708.1 COG0006 Xaa-Pro aminopeptidase YP_008041709.1 COG1802 Transcriptional regulators YP_008041710.1 COG1866 Phosphoenolpyruvate carboxykinase (ATP) YP_008041711.1 COG1281 Disulfide bond chaperones of the HSP33 family YP_008041712.1 COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) YP_008041713.1 COG3031 Type II secretory pathway, component PulC YP_008041714.1 COG1450 Type II secretory pathway, component PulD YP_008041715.1 COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB YP_008041716.1 COG1459 Type II secretory pathway, component PulF YP_008041717.1 COG2165 Type II secretory pathway, pseudopilin PulG YP_008041719.1 COG2165 Type II secretory pathway, pseudopilin PulG YP_008041720.1 COG2165 Type II secretory pathway, pseudopilin PulG YP_008041721.1 COG4795 Type II secretory pathway, component PulJ YP_008041722.1 COG3156 Type II secretory pathway, component PulK YP_008041723.1 COG3297 Type II secretory pathway, component PulL YP_008041724.1 COG3149 Type II secretory pathway, component PulM YP_008041726.1 COG2771 DNA-binding HTH domain-containing proteins YP_008041727.1 COG0162 Tyrosyl-tRNA synthetase YP_008041728.1 COG1011 Predicted hydrolase (HAD superfamily) YP_008041729.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_008041730.1 COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase YP_008041731.1 COG0814 Amino acid permeases YP_008041732.1 COG0073 EMAP domain YP_008041733.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_008041734.1 COG3060 Transcriptional regulator of met regulon YP_008041735.1 COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases YP_008041736.1 COG0527 Aspartokinases YP_008041738.1 COG2352 Phosphoenolpyruvate carboxylase YP_008041739.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_008041740.1 COG0002 Acetylglutamate semialdehyde dehydrogenase YP_008041741.1 COG0548 Acetylglutamate kinase YP_008041742.1 COG0078 Ornithine carbamoyltransferase YP_008041743.1 COG0137 Argininosuccinate synthase YP_008041744.1 COG0165 Argininosuccinate lyase YP_008041745.1 COG2808 Transcriptional regulator YP_008041748.1 COG3326 Predicted membrane protein YP_008041749.1 COG0110 Acetyltransferase (isoleucine patch superfamily) YP_008041750.1 COG3174 Predicted membrane protein YP_008041751.1 COG1613 ABC-type sulfate transport system, periplasmic component YP_008041752.1 COG3545 Predicted esterase of the alpha/beta hydrolase fold YP_008041753.1 COG0555 ABC-type sulfate transport system, permease component YP_008041754.1 COG4208 ABC-type sulfate transport system, permease component YP_008041755.1 COG1118 ABC-type sulfate/molybdate transport systems, ATPase component YP_008041756.1 COG0583 Transcriptional regulator YP_008041757.1 COG3397 Uncharacterized protein conserved in bacteria YP_008041758.1 COG0840 Methyl-accepting chemotaxis protein YP_008041759.1 COG1164 Oligoendopeptidase F YP_008041760.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008041764.1 COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system YP_008041765.1 COG3034 Uncharacterized protein conserved in bacteria YP_008041766.1 COG1296 Predicted branched-chain amino acid permease (azaleucine resistance) YP_008041767.1 COG4392 Predicted membrane protein YP_008041769.1 COG1180 Pyruvate-formate lyase-activating enzyme YP_008041770.1 COG4517 Uncharacterized protein conserved in bacteria YP_008041771.1 COG0583 Transcriptional regulator YP_008041772.1 COG1448 Aspartate/tyrosine/aromatic aminotransferase YP_008041773.1 COG1937 Uncharacterized protein conserved in bacteria YP_008041774.1 COG1230 Co/Zn/Cd efflux system component YP_008041776.1 COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases YP_008041777.1 COG2217 Cation transport ATPase YP_008041779.1 COG2077 Peroxiredoxin YP_008041781.1 COG0513 Superfamily II DNA and RNA helicases YP_008041782.1 COG3540 Phosphodiesterase/alkaline phosphatase D YP_008041785.1 COG2202 FOG: PAS/PAC domain YP_008041786.1 COG1266 Predicted metal-dependent membrane protease YP_008041788.1 COG3112 Uncharacterized protein conserved in bacteria YP_008041789.1 COG3835 Sugar diacid utilization regulator YP_008041790.1 COG2610 H+/gluconate symporter and related permeases YP_008041791.1 COG1929 Glycerate kinase YP_008041793.1 COG0386 Glutathione peroxidase YP_008041794.1 COG0583 Transcriptional regulator YP_008041795.1 COG1972 Nucleoside permease YP_008041796.1 COG0350 Methylated DNA-protein cysteine methyltransferase YP_008041797.1 COG1186 Protein chain release factor B YP_008041798.1 COG0347 Nitrogen regulatory protein PII YP_008041799.1 COG1840 ABC-type Fe3+ transport system, periplasmic component YP_008041800.1 COG1178 ABC-type Fe3+ transport system, permease component YP_008041801.1 COG3842 ABC-type spermidine/putrescine transport systems, ATPase components YP_008041802.1 COG2837 Predicted iron-dependent peroxidase YP_008041803.1 COG1438 Arginine repressor YP_008041804.1 COG4161 ABC-type arginine transport system, ATPase component YP_008041805.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008041806.1 COG4215 ABC-type arginine transport system, permease component YP_008041807.1 COG4160 ABC-type arginine/histidine transport system, permease component YP_008041808.1 COG0039 Malate/lactate dehydrogenases YP_008041809.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_008041810.1 COG1017 Hemoglobin-like flavoprotein YP_008041811.1 COG1959 Predicted transcriptional regulator YP_008041812.1 COG4536 Putative Mg2+ and Co2+ transporter CorB YP_008041813.1 COG4137 ABC-type uncharacterized transport system, permease component YP_008041814.1 COG0541 Signal recognition particle GTPase YP_008041815.1 COG0228 Ribosomal protein S16 YP_008041816.1 COG0806 RimM protein, required for 16S rRNA processing YP_008041817.1 COG0336 tRNA-(guanine-N1)-methyltransferase YP_008041818.1 COG0335 Ribosomal protein L19 YP_008041820.1 COG3066 DNA mismatch repair protein YP_008041821.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_008041822.1 COG3605 Signal transduction protein containing GAF and PtsI domains YP_008041823.1 COG0682 Prolipoprotein diacylglyceryltransferase YP_008041824.1 COG0207 Thymidylate synthase YP_008041825.1 COG3004 Na+/H+ antiporter YP_008041827.1 COG0583 Transcriptional regulator YP_008041828.1 COG0640 Predicted transcriptional regulators YP_008041829.1 COG0268 Ribosomal protein S20 YP_008041830.1 COG0728 Uncharacterized membrane protein, putative virulence factor YP_008041831.1 COG0196 FAD synthase YP_008041832.1 COG0060 Isoleucyl-tRNA synthetase YP_008041833.1 COG0597 Lipoprotein signal peptidase YP_008041834.1 COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 YP_008041835.1 COG0761 Penicillin tolerance protein YP_008041836.1 COG4970 Tfp pilus assembly protein FimT YP_008041837.1 COG4967 Tfp pilus assembly protein PilV YP_008041838.1 COG4966 Tfp pilus assembly protein PilW YP_008041840.1 COG3419 Tfp pilus assembly protein, tip-associated adhesin PilY1 YP_008041841.1 COG4968 Tfp pilus assembly protein PilE YP_008041842.1 COG4968 Tfp pilus assembly protein PilE YP_008041847.1 COG0388 Predicted amidohydrolase YP_008041848.1 COG0347 Nitrogen regulatory protein PII YP_008041849.1 COG4764 Uncharacterized protein conserved in bacteria YP_008041850.1 COG1854 LuxS protein involved in autoinducer AI2 synthesis YP_008041851.1 COG2199 FOG: GGDEF domain YP_008041852.1 COG0557 Exoribonuclease R YP_008041853.1 COG0566 rRNA methylases YP_008041854.1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases YP_008041855.1 COG2153 Predicted acyltransferase YP_008041856.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_008041857.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_008041858.1 COG2872 Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain YP_008041859.1 COG1914 Mn2+ and Fe2+ transporters of the NRAMP family YP_008041860.1 COG0360 Ribosomal protein S6 YP_008041861.1 COG0238 Ribosomal protein S18 YP_008041862.1 COG0359 Ribosomal protein L9 YP_008041863.1 COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 YP_008041867.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_008041868.1 COG1238 Predicted membrane protein YP_008041869.1 COG0612 Predicted Zn-dependent peptidases YP_008041870.1 COG2918 Gamma-glutamylcysteine synthetase YP_008041872.1 COG1022 Long-chain acyl-CoA synthetases (AMP-forming) YP_008041874.1 COG0456 Acetyltransferases YP_008041876.1 COG0714 MoxR-like ATPases YP_008041877.1 COG2425 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain YP_008041878.1 COG2202 FOG: PAS/PAC domain YP_008041879.1 COG2199 FOG: GGDEF domain YP_008041880.1 COG4108 Peptide chain release factor RF-3 YP_008041881.1 COG4538 Uncharacterized conserved protein YP_008041882.1 COG1846 Transcriptional regulators YP_008041883.1 COG2128 Uncharacterized conserved protein YP_008041884.1 COG1846 Transcriptional regulators YP_008041885.1 COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family YP_008041886.1 COG1309 Transcriptional regulator YP_008041887.1 COG0583 Transcriptional regulator YP_008041888.1 COG2957 Peptidylarginine deiminase and related enzymes YP_008041889.1 COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases YP_008041891.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_008041893.1 COG0513 Superfamily II DNA and RNA helicases YP_008041894.1 COG0583 Transcriptional regulator YP_008041895.1 COG0477 Permeases of the major facilitator superfamily YP_008041897.1 COG1912 Uncharacterized conserved protein YP_008041898.1 COG1858 Cytochrome c peroxidase YP_008041900.1 COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily YP_008041901.1 COG3719 Ribonuclease I YP_008041902.1 COG0468 RecA/RadA recombinase YP_008041903.1 COG2070 Dioxygenases related to 2-nitropropane dioxygenase YP_008041904.1 COG2816 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding YP_008041905.1 COG0642 Signal transduction histidine kinase YP_008041906.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008041907.1 COG0845 Membrane-fusion protein YP_008041908.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_008041909.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008041910.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_008041911.1 COG0765 ABC-type amino acid transport system, permease component YP_008041912.1 COG0765 ABC-type amino acid transport system, permease component YP_008041913.1 COG0498 Threonine synthase YP_008041914.1 COG1505 Serine proteases of the peptidase family S9A YP_008041915.1 COG2982 Uncharacterized protein involved in outer membrane biogenesis YP_008041916.1 COG0456 Acetyltransferases YP_008041917.1 COG4748 Uncharacterized conserved protein YP_008041918.1 COG1391 Glutamine synthetase adenylyltransferase YP_008041919.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_008041920.1 COG0840 Methyl-accepting chemotaxis protein YP_008041921.1 COG1226 Kef-type K+ transport systems, predicted NAD-binding component YP_008041922.1 COG3103 SH3 domain protein YP_008041923.1 COG0506 Proline dehydrogenase YP_008041924.1 COG2816 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding YP_008041925.1 COG0407 Uroporphyrinogen-III decarboxylase YP_008041926.1 COG1940 Transcriptional regulator/sugar kinase YP_008041927.1 COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase YP_008041928.1 COG0126 3-phosphoglycerate kinase YP_008041929.1 COG0191 Fructose/tagatose bisphosphate aldolase YP_008041930.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_008041932.1 COG4232 Thiol:disulfide interchange protein YP_008041933.1 COG1324 Uncharacterized protein involved in tolerance to divalent cations YP_008041935.1 COG4125 Predicted membrane protein YP_008041936.1 COG0583 Transcriptional regulator YP_008041937.1 COG0354 Predicted aminomethyltransferase related to GcvT YP_008041938.1 COG2938 Uncharacterized conserved protein YP_008041940.1 COG0029 Aspartate oxidase YP_008041941.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_008041942.1 COG3073 Negative regulator of sigma E activity YP_008041943.1 COG3026 Negative regulator of sigma E activity YP_008041944.1 COG3086 Positive regulator of sigma E activity YP_008041945.1 COG0481 Membrane GTPase LepA YP_008041946.1 COG0681 Signal peptidase I YP_008041947.1 COG0571 dsRNA-specific ribonuclease YP_008041948.1 COG1159 GTPase YP_008041949.1 COG1381 Recombinational DNA repair protein (RecF pathway) YP_008041950.1 COG0854 Pyridoxal phosphate biosynthesis protein YP_008041951.1 COG3345 Alpha-galactosidase YP_008041952.1 COG0191 Fructose/tagatose bisphosphate aldolase YP_008041953.1 COG1820 N-acetylglucosamine-6-phosphate deacetylase YP_008041954.1 COG2893 Phosphotransferase system, mannose/fructose-specific component IIA YP_008041955.1 COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID YP_008041956.1 COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC YP_008041957.1 COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB YP_008041958.1 COG2222 Predicted phosphosugar isomerases YP_008041959.1 COG4573 Predicted tagatose 6-phosphate kinase YP_008041960.1 COG1349 Transcriptional regulators of sugar metabolism YP_008041961.1 COG3023 Negative regulator of beta-lactamase expression YP_008041962.1 COG4807 Uncharacterized protein conserved in bacteria YP_008041963.1 COG0642 Signal transduction histidine kinase YP_008041964.1 COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase YP_008041965.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_008041966.1 COG1694 Predicted pyrophosphatase YP_008041967.1 COG0504 CTP synthase (UTP-ammonia lyase) YP_008041968.1 COG0148 Enolase YP_008041969.1 COG2919 Septum formation initiator YP_008041970.1 COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase YP_008041971.1 COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_008041972.1 COG0585 Uncharacterized conserved protein YP_008041973.1 COG0496 Predicted acid phosphatase YP_008041974.1 COG2518 Protein-L-isoaspartate carboxylmethyltransferase YP_008041975.1 COG1238 Predicted membrane protein YP_008041976.1 COG0739 Membrane proteins related to metalloendopeptidases YP_008041977.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_008041978.1 COG0533 Metal-dependent proteases with possible chaperone activity YP_008041979.1 COG0828 Ribosomal protein S21 YP_008041980.1 COG1610 Uncharacterized conserved protein YP_008041981.1 COG0358 DNA primase (bacterial type) YP_008041982.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_008041983.1 COG3676 Transposase and inactivated derivatives YP_008041984.1 COG0366 Glycosidases YP_008041985.1 COG3658 Cytochrome b YP_008041986.1 COG3783 Soluble cytochrome b562 YP_008041987.1 COG0151 Phosphoribosylamine-glycine ligase YP_008041988.1 COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) YP_008041989.1 COG0789 Predicted transcriptional regulators YP_008041990.1 COG0262 Dihydrofolate reductase YP_008041991.1 COG3036 Uncharacterized protein conserved in bacteria YP_008041992.1 COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases YP_008041993.1 COG0127 Xanthosine triphosphate pyrophosphatase YP_008041994.1 COG0477 Permeases of the major facilitator superfamily YP_008041995.1 COG0673 Predicted dehydrogenases and related proteins YP_008041997.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_008041998.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_008041999.1 COG3227 Zinc metalloprotease (elastase) YP_008042000.1 COG0583 Transcriptional regulator YP_008042001.1 COG0477 Permeases of the major facilitator superfamily YP_008042002.1 COG3203 Outer membrane protein (porin) YP_008042003.1 COG2704 Anaerobic C4-dicarboxylate transporter YP_008042004.1 COG1027 Aspartate ammonia-lyase YP_008042005.1 COG3030 Protein affecting phage T7 exclusion by the F plasmid YP_008042006.1 COG0534 Na+-driven multidrug efflux pump YP_008042007.1 COG0234 Co-chaperonin GroES (HSP10) YP_008042008.1 COG0459 Chaperonin GroEL (HSP60 family) YP_008042009.1 COG3915 Uncharacterized protein conserved in bacteria YP_008042010.1 COG2199 FOG: GGDEF domain YP_008042011.1 COG3677 Transposase and inactivated derivatives YP_008042012.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_008042013.1 COG0553 Superfamily II DNA/RNA helicases, SNF2 family YP_008042015.1 COG0209 Ribonucleotide reductase, alpha subunit YP_008042016.1 COG0209 Ribonucleotide reductase, alpha subunit YP_008042017.1 COG1875 Predicted ATPase related to phosphate starvation-inducible protein PhoH YP_008042018.1 COG3840 ABC-type thiamine transport system, ATPase component YP_008042019.1 COG1178 ABC-type Fe3+ transport system, permease component YP_008042020.1 COG4143 ABC-type thiamine transport system, periplasmic component YP_008042022.1 COG1305 Transglutaminase-like enzymes, putative cysteine proteases YP_008042023.1 COG0066 3-isopropylmalate dehydratase small subunit YP_008042024.1 COG0065 3-isopropylmalate dehydratase large subunit YP_008042025.1 COG0473 Isocitrate/isopropylmalate dehydrogenase YP_008042026.1 COG0119 Isopropylmalate/homocitrate/citramalate synthases YP_008042027.1 COG1309 Transcriptional regulator YP_008042028.1 COG0671 Membrane-associated phospholipid phosphatase YP_008042029.1 COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase YP_008042031.1 COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] YP_008042032.1 COG0440 Acetolactate synthase, small (regulatory) subunit YP_008042033.1 COG0857 BioD-like N-terminal domain of phosphotransacetylase YP_008042034.1 COG0282 Acetate kinase YP_008042035.1 COG3092 Uncharacterized protein conserved in bacteria YP_008042036.1 COG3013 Uncharacterized conserved protein YP_008042037.1 COG1225 Peroxiredoxin YP_008042038.1 COG2716 Glycine cleavage system regulatory protein YP_008042039.1 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase YP_008042040.1 COG3317 Uncharacterized lipoprotein YP_008042041.1 COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase YP_008042042.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008042043.1 COG0583 Transcriptional regulator YP_008042045.1 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases YP_008042048.1 COG0642 Signal transduction histidine kinase YP_008042049.1 COG0232 dGTP triphosphohydrolase YP_008042051.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008042052.1 COG0784 FOG: CheY-like receiver YP_008042053.1 COG0840 Methyl-accepting chemotaxis protein YP_008042054.1 COG0250 Transcription antiterminator YP_008042055.1 COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen YP_008042056.1 COG2011 ABC-type metal ion transport system, permease component YP_008042057.1 COG1135 ABC-type metal ion transport system, ATPase component YP_008042059.1 COG1940 Transcriptional regulator/sugar kinase YP_008042060.1 COG1600 Uncharacterized Fe-S protein YP_008042061.1 COG0062 Uncharacterized conserved protein YP_008042062.1 COG0802 Predicted ATPase or kinase YP_008042063.1 COG0860 N-acetylmuramoyl-L-alanine amidase YP_008042064.1 COG0323 DNA mismatch repair enzyme (predicted ATPase) YP_008042065.1 COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase YP_008042066.1 COG1923 Uncharacterized host factor I protein YP_008042067.1 COG2262 GTPases YP_008042068.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_008042069.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_008042070.1 COG3242 Uncharacterized protein conserved in bacteria YP_008042071.1 COG0142 Geranylgeranyl pyrophosphate synthase YP_008042072.1 COG0261 Ribosomal protein L21 YP_008042073.1 COG0211 Ribosomal protein L27 YP_008042074.1 COG0536 Predicted GTPase YP_008042075.1 COG3314 Uncharacterized protein conserved in bacteria YP_008042076.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_008042079.1 COG0840 Methyl-accepting chemotaxis protein YP_008042080.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases YP_008042081.1 COG1396 Predicted transcriptional regulators YP_008042082.1 COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases YP_008042083.1 COG2967 Uncharacterized protein affecting Mg2+/Co2+ transport YP_008042084.1 COG0030 Dimethyladenosine transferase (rRNA methylation) YP_008042085.1 COG1995 Pyridoxal phosphate biosynthesis protein YP_008042086.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_008042087.1 COG1452 Organic solvent tolerance protein OstA YP_008042088.1 COG3178 Predicted phosphotransferase related to Ser/Thr protein kinases YP_008042089.1 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) YP_008042090.1 COG1076 DnaJ-domain-containing proteins 1 YP_008042091.1 COG2252 Permeases YP_008042093.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_008042094.1 COG0582 Integrase YP_008042096.1 COG0629 Single-stranded DNA-binding protein YP_008042100.1 COG0752 Glycyl-tRNA synthetase, alpha subunit YP_008042103.1 COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) YP_008042104.1 COG1396 Predicted transcriptional regulators YP_008042106.1 COG3646 Uncharacterized phage-encoded protein YP_008042110.1 COG3646 Uncharacterized phage-encoded protein YP_008042118.1 COG2801 Transposase and inactivated derivatives YP_008042119.1 COG0419 ATPase involved in DNA repair YP_008042120.1 COG0863 DNA modification methylase YP_008042121.1 COG0464 ATPases of the AAA+ class YP_008042122.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_008042124.1 COG2048 Heterodisulfide reductase, subunit B YP_008042126.1 COG3772 Phage-related lysozyme (muraminidase) YP_008042128.1 COG4453 Uncharacterized protein conserved in bacteria YP_008042129.1 COG1403 Restriction endonuclease YP_008042130.1 COG3747 Phage terminase, small subunit YP_008042131.1 COG4626 Phage terminase-like protein, large subunit YP_008042133.1 COG4695 Phage-related protein YP_008042134.1 COG0616 Periplasmic serine proteases (ClpP class) YP_008042139.1 COG0296 1,4-alpha-glucan branching enzyme YP_008042140.1 COG0262 Dihydrofolate reductase YP_008042142.1 COG3941 Mu-like prophage protein YP_008042150.1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases YP_008042152.1 COG0775 Nucleoside phosphorylase YP_008042153.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_008042156.1 COG0583 Transcriptional regulator YP_008042157.1 COG0005 Purine nucleoside phosphorylase YP_008042158.1 COG1972 Nucleoside permease YP_008042159.1 COG0274 Deoxyribose-phosphate aldolase YP_008042160.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_008042161.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_008042162.1 COG1284 Uncharacterized conserved protein YP_008042163.1 COG4559 ABC-type hemin transport system, ATPase component YP_008042164.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component YP_008042165.1 COG4558 ABC-type hemin transport system, periplasmic component YP_008042166.1 COG3721 Putative heme iron utilization protein YP_008042167.1 COG0748 Putative heme iron utilization protein YP_008042169.1 COG1335 Amidases related to nicotinamidase YP_008042170.1 COG3016 Uncharacterized iron-regulated protein YP_008042171.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008042172.1 COG0477 Permeases of the major facilitator superfamily YP_008042173.1 COG3655 Predicted transcriptional regulator YP_008042175.1 COG0591 Na+/proline symporter YP_008042176.1 COG3325 Chitinase YP_008042178.1 COG3979 Uncharacterized protein contain chitin-binding domain type 3 YP_008042179.1 COG0500 SAM-dependent methyltransferases YP_008042180.1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases YP_008042181.1 COG1765 Predicted redox protein, regulator of disulfide bond formation YP_008042182.1 COG3895 Predicted periplasmic protein YP_008042184.1 COG3954 Phosphoribulokinase YP_008042185.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_008042186.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_008042187.1 COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family YP_008042188.1 COG0726 Predicted xylanase/chitin deacetylase YP_008042189.1 COG0223 Methionyl-tRNA formyltransferase YP_008042190.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_008042191.1 COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis YP_008042192.1 COG1004 Predicted UDP-glucose 6-dehydrogenase YP_008042193.1 COG3089 Uncharacterized protein conserved in bacteria YP_008042194.1 COG2199 FOG: GGDEF domain YP_008042195.1 COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold YP_008042196.1 COG0835 Chemotaxis signal transduction protein YP_008042197.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_008042198.1 COG3529 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain YP_008042199.1 COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 YP_008042200.1 COG2900 Uncharacterized protein conserved in bacteria YP_008042201.1 COG2319 FOG: WD40 repeat YP_008042202.1 COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 YP_008042203.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_008042204.1 COG0457 FOG: TPR repeat YP_008042207.1 COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases YP_008042208.1 COG2200 FOG: EAL domain YP_008042209.1 COG4395 Uncharacterized protein conserved in bacteria YP_008042211.1 COG0305 Replicative DNA helicase YP_008042213.1 COG0787 Alanine racemase YP_008042214.1 COG1145 Ferredoxin YP_008042215.1 COG0826 Collagenase and related proteases YP_008042216.1 COG2200 FOG: EAL domain YP_008042219.1 COG0520 Selenocysteine lyase YP_008042220.1 COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain YP_008042221.1 COG1871 Chemotaxis protein; stimulates methylation of MCP proteins YP_008042222.1 COG1352 Methylase of chemotaxis methyl-accepting proteins YP_008042223.1 COG0840 Methyl-accepting chemotaxis protein YP_008042224.1 COG0835 Chemotaxis signal transduction protein YP_008042225.1 COG0840 Methyl-accepting chemotaxis protein YP_008042226.1 COG0643 Chemotaxis protein histidine kinase and related kinases YP_008042227.1 COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) YP_008042228.1 COG0784 FOG: CheY-like receiver YP_008042230.1 COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III YP_008042231.1 COG0583 Transcriptional regulator YP_008042232.1 COG1280 Putative threonine efflux protein YP_008042233.1 COG0826 Collagenase and related proteases YP_008042235.1 COG0350 Methylated DNA-protein cysteine methyltransferase YP_008042236.1 COG2169 Adenosine deaminase YP_008042238.1 COG2317 Zn-dependent carboxypeptidase YP_008042239.1 COG2840 Uncharacterized protein conserved in bacteria YP_008042241.1 COG3735 Uncharacterized protein conserved in bacteria YP_008042243.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008042245.1 COG0840 Methyl-accepting chemotaxis protein YP_008042247.1 COG2133 Glucose/sorbosone dehydrogenases YP_008042248.1 COG0659 Sulfate permease and related transporters (MFS superfamily) YP_008042249.1 COG2326 Uncharacterized conserved protein YP_008042250.1 COG0582 Integrase YP_008042251.1 COG3311 Predicted transcriptional regulator YP_008042253.1 COG3328 Transposase and inactivated derivatives YP_008042254.1 COG0500 SAM-dependent methyltransferases YP_008042255.1 COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain YP_008042256.1 COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components YP_008042257.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component YP_008042258.1 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component YP_008042259.1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases YP_008042260.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008042261.1 COG3604 Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains YP_008042262.1 COG3842 ABC-type spermidine/putrescine transport systems, ATPase components YP_008042263.1 COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component YP_008042264.1 COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components YP_008042265.1 COG0500 SAM-dependent methyltransferases YP_008042266.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008042267.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_008042268.1 COG3315 O-Methyltransferase involved in polyketide biosynthesis YP_008042271.1 COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) YP_008042272.1 COG0553 Superfamily II DNA/RNA helicases, SNF2 family YP_008042273.1 COG0514 Superfamily II DNA helicase YP_008042276.1 COG1472 Beta-glucosidase-related glycosidases YP_008042277.1 COG1201 Lhr-like helicases YP_008042278.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_008042281.1 COG0720 6-pyruvoyl-tetrahydropterin synthase YP_008042282.1 COG1518 Uncharacterized protein predicted to be involved in DNA repair YP_008042283.1 COG0343 Queuine/archaeosine tRNA-ribosyltransferase YP_008042284.1 COG0603 Predicted PP-loop superfamily ATPase YP_008042285.1 COG0602 Organic radical activating enzymes YP_008042286.1 COG5433 Transposase YP_008042287.1 COG2003 DNA repair proteins YP_008042294.1 COG1396 Predicted transcriptional regulators YP_008042296.1 COG5377 Phage-related protein, predicted endonuclease YP_008042299.1 COG3634 Alkyl hydroperoxide reductase, large subunit YP_008042300.1 COG3018 Uncharacterized protein conserved in bacteria YP_008042301.1 COG1605 Chorismate mutase YP_008042302.1 COG1011 Predicted hydrolase (HAD superfamily) YP_008042304.1 COG1606 ATP-utilizing enzymes of the PP-loop superfamily YP_008042306.1 COG0477 Permeases of the major facilitator superfamily YP_008042307.1 COG1683 Uncharacterized conserved protein YP_008042308.1 COG0789 Predicted transcriptional regulators YP_008042309.1 COG0415 Deoxyribodipyrimidine photolyase YP_008042311.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008042312.1 COG2907 Predicted NAD/FAD-binding protein YP_008042313.1 COG3496 Uncharacterized conserved protein YP_008042314.1 COG2230 Cyclopropane fatty acid synthase and related methyltransferases YP_008042319.1 COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) YP_008042320.1 COG1151 6Fe-6S prismane cluster-containing protein YP_008042321.1 COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 YP_008042322.1 COG1087 UDP-glucose 4-epimerase YP_008042323.1 COG1651 Protein-disulfide isomerase YP_008042324.1 COG2771 DNA-binding HTH domain-containing proteins YP_008042325.1 COG3157 Hemolysin-coregulated protein (uncharacterized) YP_008042326.1 COG3501 Uncharacterized protein conserved in bacteria YP_008042330.1 COG0583 Transcriptional regulator YP_008042331.1 COG3527 Alpha-acetolactate decarboxylase YP_008042332.1 COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] YP_008042333.1 COG0693 Putative intracellular protease/amidase YP_008042334.1 COG1893 Ketopantoate reductase YP_008042335.1 COG1666 Uncharacterized protein conserved in bacteria YP_008042336.1 COG3248 Nucleoside-binding outer membrane protein YP_008042337.1 COG0477 Permeases of the major facilitator superfamily YP_008042339.1 COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family YP_008042340.1 COG3056 Uncharacterized lipoprotein YP_008042341.1 COG2813 16S RNA G1207 methylase RsmC YP_008042342.1 COG0271 Stress-induced morphogen (activity unknown) YP_008042343.1 COG1726 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA YP_008042344.1 COG1805 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB YP_008042345.1 COG2869 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC YP_008042346.1 COG1347 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD YP_008042347.1 COG2209 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE YP_008042348.1 COG2871 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF YP_008042349.1 COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis YP_008042350.1 COG2991 Uncharacterized protein conserved in bacteria YP_008042352.1 COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair YP_008042353.1 COG0840 Methyl-accepting chemotaxis protein YP_008042354.1 COG0583 Transcriptional regulator YP_008042355.1 COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold YP_008042356.1 COG2363 Uncharacterized small membrane protein YP_008042357.1 COG2933 Predicted SAM-dependent methyltransferase YP_008042359.1 COG0473 Isocitrate/isopropylmalate dehydrogenase YP_008042360.1 COG0258 5'-3' exonuclease (including N-terminal domain of PolI) YP_008042361.1 COG1611 Predicted Rossmann fold nucleotide-binding protein YP_008042362.1 COG2199 FOG: GGDEF domain YP_008042363.1 COG0457 FOG: TPR repeat YP_008042364.1 COG2904 Uncharacterized protein conserved in bacteria YP_008042366.1 COG5595 Zn-ribbon-containing, possibly nucleic-acid-binding protein YP_008042371.1 COG3098 Uncharacterized protein conserved in bacteria YP_008042372.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_008042373.1 COG0716 Flavodoxins YP_008042374.1 COG4580 Maltoporin (phage lambda and maltose receptor) YP_008042376.1 COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific YP_008042377.1 COG0114 Fumarase YP_008042378.1 COG2171 Tetrahydrodipicolinate N-succinyltransferase YP_008042379.1 COG2844 UTP:GlnB (protein PII) uridylyltransferase YP_008042380.1 COG0024 Methionine aminopeptidase YP_008042381.1 COG0052 Ribosomal protein S2 YP_008042382.1 COG0264 Translation elongation factor Ts YP_008042383.1 COG0528 Uridylate kinase YP_008042384.1 COG0233 Ribosome recycling factor YP_008042385.1 COG0020 Undecaprenyl pyrophosphate synthase YP_008042386.1 COG0575 CDP-diglyceride synthetase YP_008042387.1 COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_008042388.1 COG0750 Predicted membrane-associated Zn-dependent proteases 1 YP_008042389.1 COG4775 Outer membrane protein/protective antigen OMA87 YP_008042390.1 COG2825 Outer membrane protein YP_008042391.1 COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_008042392.1 COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases YP_008042393.1 COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase YP_008042394.1 COG0763 Lipid A disaccharide synthetase YP_008042395.1 COG0164 Ribonuclease HII YP_008042396.1 COG0587 DNA polymerase III, alpha subunit YP_008042397.1 COG0825 Acetyl-CoA carboxylase alpha subunit YP_008042398.1 COG3710 DNA-binding winged-HTH domains YP_008042399.1 COG0531 Amino acid transporters YP_008042400.1 COG1982 Arginine/lysine/ornithine decarboxylases YP_008042401.1 COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase YP_008042402.1 COG0534 Na+-driven multidrug efflux pump YP_008042403.1 COG0583 Transcriptional regulator YP_008042404.1 COG0814 Amino acid permeases YP_008042405.1 COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III YP_008042406.1 COG0583 Transcriptional regulator YP_008042407.1 COG0531 Amino acid transporters YP_008042408.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_008042409.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_008042411.1 COG3590 Predicted metalloendopeptidase YP_008042412.1 COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control YP_008042413.1 COG2199 FOG: GGDEF domain YP_008042414.1 COG0475 Kef-type K+ transport systems, membrane components YP_008042415.1 COG1752 Predicted esterase of the alpha-beta hydrolase superfamily YP_008042416.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_008042417.1 COG1309 Transcriptional regulator YP_008042418.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_008042419.1 COG0625 Glutathione S-transferase YP_008042420.1 COG0366 Glycosidases YP_008042421.1 COG5542 Predicted integral membrane protein YP_008042423.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_008042425.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008042426.1 COG2989 Uncharacterized protein conserved in bacteria YP_008042427.1 COG3108 Uncharacterized protein conserved in bacteria YP_008042429.1 COG2860 Predicted membrane protein YP_008042430.1 COG2981 Uncharacterized protein involved in cysteine biosynthesis YP_008042431.1 COG1196 Chromosome segregation ATPases YP_008042432.1 COG3115 Cell division protein YP_008042433.1 COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) YP_008042435.1 COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase YP_008042436.1 COG0602 Organic radical activating enzymes YP_008042437.1 COG0401 Uncharacterized homolog of Blt101 YP_008042438.1 COG0810 Periplasmic protein TonB, links inner and outer membranes YP_008042439.1 COG3895 Predicted periplasmic protein YP_008042440.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008042442.1 COG1566 Multidrug resistance efflux pump YP_008042443.1 COG1846 Transcriptional regulators YP_008042444.1 COG3493 Na+/citrate symporter YP_008042445.1 COG0281 Malic enzyme YP_008042446.1 COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism YP_008042447.1 COG4565 Response regulator of citrate/malate metabolism YP_008042448.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_008042449.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_008042450.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_008042451.1 COG3284 Transcriptional activator of acetoin/glycerol metabolism YP_008042452.1 COG1960 Acyl-CoA dehydrogenases YP_008042453.1 COG1804 Predicted acyl-CoA transferases/carnitine dehydratase YP_008042454.1 COG0346 Lactoylglutathione lyase and related lyases YP_008042455.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008042456.1 COG0642 Signal transduction histidine kinase YP_008042457.1 COG0226 ABC-type phosphate transport system, periplasmic component YP_008042458.1 COG0501 Zn-dependent protease with chaperone function YP_008042459.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_008042460.1 COG1940 Transcriptional regulator/sugar kinase YP_008042461.1 COG3142 Uncharacterized protein involved in copper resistance YP_008042462.1 COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 YP_008042463.1 COG1131 ABC-type multidrug transport system, ATPase component YP_008042464.1 COG0842 ABC-type multidrug transport system, permease component YP_008042467.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_008042468.1 COG1541 Coenzyme F390 synthetase YP_008042469.1 COG0678 Peroxiredoxin YP_008042470.1 COG0530 Ca2+/Na+ antiporter YP_008042471.1 COG0019 Diaminopimelate decarboxylase YP_008042472.1 COG1115 Na+/alanine symporter YP_008042473.1 COG0095 Lipoate-protein ligase A YP_008042474.1 COG2233 Xanthine/uracil permeases YP_008042475.1 COG2199 FOG: GGDEF domain YP_008042477.1 COG0534 Na+-driven multidrug efflux pump YP_008042478.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_008042479.1 COG0281 Malic enzyme YP_008042480.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_008042481.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_008042482.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_008042485.1 COG2944 Predicted transcriptional regulator YP_008042486.1 COG0733 Na+-dependent transporters of the SNF family YP_008042487.1 COG1752 Predicted esterase of the alpha-beta hydrolase superfamily YP_008042488.1 COG2199 FOG: GGDEF domain YP_008042489.1 COG0845 Membrane-fusion protein YP_008042490.1 COG0841 Cation/multidrug efflux pump YP_008042492.1 COG1032 Fe-S oxidoreductase YP_008042494.1 COG0695 Glutaredoxin and related proteins YP_008042495.1 COG2318 Uncharacterized protein conserved in bacteria YP_008042496.1 COG0673 Predicted dehydrogenases and related proteins YP_008042498.1 COG0817 Holliday junction resolvasome, endonuclease subunit YP_008042499.1 COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) YP_008042500.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_008042501.1 COG0366 Glycosidases YP_008042502.1 COG0739 Membrane proteins related to metalloendopeptidases YP_008042503.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_008042505.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_008042507.1 COG0788 Formyltetrahydrofolate hydrolase YP_008042508.1 COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_008042510.1 COG3118 Thioredoxin domain-containing protein YP_008042511.1 COG2091 Phosphopantetheinyl transferase YP_008042512.1 COG0791 Cell wall-associated hydrolases (invasion-associated proteins) YP_008042513.1 COG3129 Predicted SAM-dependent methyltransferase YP_008042514.1 COG2030 Acyl dehydratase YP_008042516.1 COG1376 Uncharacterized protein conserved in bacteria YP_008042517.1 COG0553 Superfamily II DNA/RNA helicases, SNF2 family YP_008042518.1 COG1743 Adenine-specific DNA methylase containing a Zn-ribbon YP_008042521.1 COG1483 Predicted ATPase (AAA+ superfamily) YP_008042522.1 COG4877 Uncharacterized protein conserved in bacteria YP_008042530.1 COG2003 DNA repair proteins YP_008042536.1 COG1396 Predicted transcriptional regulators YP_008042541.1 COG0535 Predicted Fe-S oxidoreductases YP_008042545.1 COG3311 Predicted transcriptional regulator YP_008042547.1 COG0582 Integrase YP_008042548.1 COG0747 ABC-type dipeptide transport system, periplasmic component YP_008042549.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_008042550.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_008042551.1 COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase YP_008042552.1 COG1454 Alcohol dehydrogenase, class IV YP_008042553.1 COG4154 Fucose dissimilation pathway protein FucU YP_008042554.1 COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases YP_008042555.1 COG1070 Sugar (pentulose and hexulose) kinases YP_008042556.1 COG2407 L-fucose isomerase and related proteins YP_008042557.1 COG0738 Fucose permease YP_008042558.1 COG1349 Transcriptional regulators of sugar metabolism YP_008042559.1 COG0376 Catalase (peroxidase I) YP_008042560.1 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase YP_008042561.1 COG1737 Transcriptional regulators YP_008042562.1 COG3010 Putative N-acetylmannosamine-6-phosphate epimerase YP_008042563.1 COG1940 Transcriptional regulator/sugar kinase YP_008042564.1 COG0591 Na+/proline symporter YP_008042565.1 COG2731 Beta-galactosidase, beta subunit YP_008042566.1 COG4409 Neuraminidase (sialidase) YP_008042567.1 COG5519 Superfamily II helicase and inactivated derivatives YP_008042569.1 COG3311 Predicted transcriptional regulator YP_008042570.1 COG0582 Integrase YP_008042571.1 COG2076 Membrane transporters of cations and cationic drugs YP_008042572.1 COG2076 Membrane transporters of cations and cationic drugs YP_008042574.1 COG4869 Propanediol utilization protein YP_008042575.1 COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein YP_008042576.1 COG1180 Pyruvate-formate lyase-activating enzyme YP_008042577.1 COG1882 Pyruvate-formate lyase YP_008042578.1 COG1454 Alcohol dehydrogenase, class IV YP_008042579.1 COG4576 Carbon dioxide concentrating mechanism/carboxysome shell protein YP_008042580.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_008042581.1 COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein YP_008042582.1 COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein YP_008042583.1 COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein YP_008042585.1 COG3710 DNA-binding winged-HTH domains YP_008042586.1 COG1309 Transcriptional regulator YP_008042587.1 COG0583 Transcriptional regulator YP_008042588.1 COG1526 Uncharacterized protein required for formate dehydrogenase activity YP_008042589.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_008042590.1 COG1387 Histidinol phosphatase and related hydrolases of the PHP family YP_008042591.1 COG1309 Transcriptional regulator YP_008042592.1 COG1960 Acyl-CoA dehydrogenases YP_008042593.1 COG0841 Cation/multidrug efflux pump YP_008042594.1 COG0845 Membrane-fusion protein YP_008042595.1 COG0469 Pyruvate kinase YP_008042596.1 COG1737 Transcriptional regulators YP_008042597.1 COG0837 Glucokinase YP_008042598.1 COG0642 Signal transduction histidine kinase YP_008042599.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008042600.1 COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain YP_008042601.1 COG0845 Membrane-fusion protein YP_008042602.1 COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain YP_008042604.1 COG2994 ACP:hemolysin acyltransferase (hemolysin-activating protein) YP_008042605.1 COG2931 RTX toxins and related Ca2+-binding proteins YP_008042606.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_008042607.1 COG0621 2-methylthioadenine synthetase YP_008042608.1 COG2206 HD-GYP domain YP_008042610.1 COG1677 Flagellar hook-basal body protein YP_008042611.1 COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein YP_008042612.1 COG1536 Flagellar motor switch protein YP_008042613.1 COG1317 Flagellar biosynthesis/type III secretory pathway protein YP_008042614.1 COG1157 Flagellar biosynthesis/type III secretory pathway ATPase YP_008042615.1 COG2882 Flagellar biosynthesis chaperone YP_008042616.1 COG3144 Flagellar hook-length control protein YP_008042617.1 COG1580 Flagellar basal body-associated protein YP_008042618.1 COG1868 Flagellar motor switch protein YP_008042619.1 COG1886 Flagellar motor switch/type III secretory pathway protein YP_008042620.1 COG3190 Flagellar biogenesis protein YP_008042621.1 COG1338 Flagellar biosynthesis pathway, component FliP YP_008042622.1 COG1987 Flagellar biosynthesis pathway, component FliQ YP_008042623.1 COG1684 Flagellar biosynthesis pathway, component FliR YP_008042624.1 COG1377 Flagellar biosynthesis pathway, component FlhB YP_008042625.1 COG1298 Flagellar biosynthesis pathway, component FlhA YP_008042626.1 COG1419 Flagellar GTP-binding protein YP_008042627.1 COG0455 ATPases involved in chromosome partitioning YP_008042628.1 COG1191 DNA-directed RNA polymerase specialized sigma subunit YP_008042629.1 COG0784 FOG: CheY-like receiver YP_008042630.1 COG3143 Chemotaxis protein YP_008042631.1 COG0643 Chemotaxis protein histidine kinase and related kinases YP_008042632.1 COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain YP_008042633.1 COG1291 Flagellar motor component YP_008042634.1 COG1360 Flagellar motor protein YP_008042635.1 COG1192 ATPases involved in chromosome partitioning YP_008042636.1 COG0835 Chemotaxis signal transduction protein YP_008042637.1 COG0835 Chemotaxis signal transduction protein YP_008042639.1 COG4133 ABC-type transport system involved in cytochrome c biogenesis, ATPase component YP_008042640.1 COG2386 ABC-type transport system involved in cytochrome c biogenesis, permease component YP_008042641.1 COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component YP_008042642.1 COG3114 Heme exporter protein D YP_008042643.1 COG2332 Cytochrome c-type biogenesis protein CcmE YP_008042644.1 COG1138 Cytochrome c biogenesis factor YP_008042645.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_008042646.1 COG3088 Uncharacterized protein involved in biosynthesis of c-type cytochromes YP_008042647.1 COG4235 Cytochrome c biogenesis factor YP_008042648.1 COG2853 Surface lipoprotein YP_008042649.1 COG0605 Superoxide dismutase YP_008042650.1 COG0278 Glutaredoxin-related protein YP_008042651.1 COG0144 tRNA and rRNA cytosine-C5-methylases YP_008042654.1 COG0259 Pyridoxamine-phosphate oxidase YP_008042655.1 COG0625 Glutathione S-transferase YP_008042656.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_008042657.1 COG3153 Predicted acetyltransferase YP_008042659.1 COG2850 Uncharacterized conserved protein YP_008042660.1 COG0015 Adenylosuccinate lyase YP_008042661.1 COG2915 Uncharacterized protein involved in purine metabolism YP_008042662.1 COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain YP_008042663.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_008042664.1 COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases YP_008042665.1 COG1925 Phosphotransferase system, HPr-related proteins YP_008042666.1 COG1445 Phosphotransferase system fructose-specific component IIB YP_008042667.1 COG2271 Sugar phosphate permease YP_008042668.1 COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) YP_008042669.1 COG0563 Adenylate kinase and related kinases YP_008042670.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_008042671.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_008042672.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_008042674.1 COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) YP_008042675.1 COG1609 Transcriptional regulators YP_008042676.1 COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific YP_008042677.1 COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities YP_008042679.1 COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) YP_008042682.1 COG1482 Phosphomannose isomerase YP_008042683.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_008042684.1 COG0538 Isocitrate dehydrogenases YP_008042686.1 COG3048 D-serine dehydratase YP_008042687.1 COG2610 H+/gluconate symporter and related permeases YP_008042688.1 COG0583 Transcriptional regulator YP_008042692.1 COG4823 Abortive infection bacteriophage resistance protein YP_008042693.1 COG0732 Restriction endonuclease S subunits YP_008042694.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_008042695.1 COG4096 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases YP_008042696.1 COG2932 Predicted transcriptional regulator YP_008042697.1 COG2801 Transposase and inactivated derivatives YP_008042698.1 COG2842 Uncharacterized ATPase, putative transposase YP_008042706.1 COG4382 Mu-like prophage protein gp16 YP_008042707.1 COG5566 Uncharacterized conserved protein YP_008042708.1 COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit YP_008042710.1 COG3926 Putative secretion activating protein YP_008042713.1 COG1734 DnaK suppressor protein YP_008042717.1 COG4373 Mu-like prophage FluMu protein gp28 YP_008042718.1 COG4383 Mu-like prophage protein gp29 YP_008042719.1 COG2369 Uncharacterized protein, homolog of phage Mu protein gp30 YP_008042721.1 COG5005 Mu-like prophage protein gpG YP_008042722.1 COG4388 Mu-like prophage I protein YP_008042723.1 COG4397 Mu-like prophage major head subunit gpT YP_008042724.1 COG1158 Transcription termination factor YP_008042725.1 COG4387 Mu-like prophage protein gp36 YP_008042729.1 COG3941 Mu-like prophage protein YP_008042736.1 COG4096 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases YP_008042737.1 COG0691 tmRNA-binding protein YP_008042738.1 COG2867 Oligoketide cyclase/lipid transport protein YP_008042739.1 COG2914 Uncharacterized protein conserved in bacteria YP_008042740.1 COG0702 Predicted nucleoside-diphosphate-sugar epimerases YP_008042741.1 COG2913 Small protein A (tmRNA-binding) YP_008042746.1 COG3745 Flp pilus assembly protein CpaB YP_008042747.1 COG4964 Flp pilus assembly protein, secretin CpaC YP_008042749.1 COG4963 Flp pilus assembly protein, ATPase CpaE YP_008042750.1 COG4962 Flp pilus assembly protein, ATPase CpaF YP_008042751.1 COG4965 Flp pilus assembly protein TadB YP_008042752.1 COG2064 Flp pilus assembly protein TadC YP_008042753.1 COG0457 FOG: TPR repeat YP_008042757.1 COG1454 Alcohol dehydrogenase, class IV YP_008042758.1 COG2820 Uridine phosphorylase YP_008042759.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_008042760.1 COG1957 Inosine-uridine nucleoside N-ribohydrolase YP_008042762.1 COG4519 Uncharacterized protein conserved in bacteria YP_008042764.1 COG0840 Methyl-accepting chemotaxis protein YP_008042765.1 COG1280 Putative threonine efflux protein YP_008042767.1 COG0025 NhaP-type Na+/H+ and K+/H+ antiporters YP_008042768.1 COG0372 Citrate synthase YP_008042769.1 COG3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain YP_008042771.1 COG1876 D-alanyl-D-alanine carboxypeptidase YP_008042772.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_008042773.1 COG1393 Arsenate reductase and related proteins, glutaredoxin family YP_008042774.1 COG0583 Transcriptional regulator YP_008042776.1 COG3069 C4-dicarboxylate transporter YP_008042777.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_008042778.1 COG2102 Predicted ATPases of PP-loop superfamily YP_008042779.1 COG2704 Anaerobic C4-dicarboxylate transporter YP_008042780.1 COG0017 Aspartyl/asparaginyl-tRNA synthetases YP_008042782.1 COG0840 Methyl-accepting chemotaxis protein YP_008042783.1 COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_008042784.1 COG0502 Biotin synthase and related enzymes YP_008042785.1 COG0156 7-keto-8-aminopelargonate synthetase and related enzymes YP_008042786.1 COG0500 SAM-dependent methyltransferases YP_008042787.1 COG0132 Dethiobiotin synthetase YP_008042788.1 COG0501 Zn-dependent protease with chaperone function YP_008042789.1 COG0840 Methyl-accepting chemotaxis protein YP_008042790.1 COG3217 Uncharacterized Fe-S protein YP_008042791.1 COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases YP_008042792.1 COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit YP_008042793.1 COG2366 Protein related to penicillin acylase YP_008042794.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_008042795.1 COG2841 Uncharacterized protein conserved in bacteria YP_008042797.1 COG0534 Na+-driven multidrug efflux pump YP_008042798.1 COG0659 Sulfate permease and related transporters (MFS superfamily) YP_008042799.1 COG3575 Uncharacterized protein conserved in bacteria YP_008042800.1 COG2388 Predicted acetyltransferase YP_008042801.1 COG0031 Cysteine synthase YP_008042803.1 COG1454 Alcohol dehydrogenase, class IV YP_008042805.1 COG1309 Transcriptional regulator YP_008042806.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_008042808.1 COG0791 Cell wall-associated hydrolases (invasion-associated proteins) YP_008042810.1 COG0583 Transcriptional regulator YP_008042811.1 COG0450 Peroxiredoxin YP_008042812.1 COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes YP_008042814.1 COG4067 Uncharacterized protein conserved in archaea YP_008042815.1 COG0500 SAM-dependent methyltransferases YP_008042816.1 COG0500 SAM-dependent methyltransferases YP_008042817.1 COG1801 Uncharacterized conserved protein YP_008042818.1 COG0173 Aspartyl-tRNA synthetase YP_008042819.1 COG0217 Uncharacterized conserved protein YP_008042820.1 COG2194 Predicted membrane-associated, metal-dependent hydrolase YP_008042821.1 COG2194 Predicted membrane-associated, metal-dependent hydrolase YP_008042822.1 COG1940 Transcriptional regulator/sugar kinase YP_008042823.1 COG1820 N-acetylglucosamine-6-phosphate deacetylase YP_008042824.1 COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase YP_008042825.1 COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific YP_008042826.1 COG3525 N-acetyl-beta-hexosaminidase YP_008042827.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_008042828.1 COG0735 Fe2+/Zn2+ uptake regulation proteins YP_008042830.1 COG0716 Flavodoxins YP_008042833.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_008042834.1 COG3057 Negative regulator of replication initiationR YP_008042835.1 COG0033 Phosphoglucomutase YP_008042836.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_008042837.1 COG1846 Transcriptional regulators YP_008042838.1 COG2951 Membrane-bound lytic murein transglycosylase B YP_008042839.1 COG0558 Phosphatidylglycerophosphate synthase YP_008042840.1 COG4136 ABC-type uncharacterized transport system, ATPase component YP_008042841.1 COG4135 ABC-type uncharacterized transport system, permease component YP_008042842.1 COG4134 ABC-type uncharacterized transport system, periplasmic component YP_008042843.1 COG0398 Uncharacterized conserved protein YP_008042844.1 COG2128 Uncharacterized conserved protein YP_008042845.1 COG4446 Uncharacterized protein conserved in bacteria YP_008042846.1 COG0225 Peptide methionine sulfoxide reductase YP_008042847.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_008042849.1 COG0729 Outer membrane protein YP_008042850.1 COG2911 Uncharacterized protein conserved in bacteria YP_008042852.1 COG1544 Ribosome-associated protein Y (PSrp-1) YP_008042853.1 COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain YP_008042854.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_008042855.1 COG1609 Transcriptional regulators YP_008042856.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_008042857.1 COG1607 Acyl-CoA hydrolase YP_008042859.1 COG3021 Uncharacterized protein conserved in bacteria YP_008042860.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_008042861.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_008042862.1 COG0500 SAM-dependent methyltransferases YP_008042863.1 COG0328 Ribonuclease HI YP_008042864.1 COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases YP_008042866.1 COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain YP_008042867.1 COG1960 Acyl-CoA dehydrogenases YP_008042868.1 COG0279 Phosphoheptose isomerase YP_008042869.1 COG0121 Predicted glutamine amidotransferase YP_008042870.1 COG2198 FOG: HPt domain YP_008042871.1 COG0391 Uncharacterized conserved protein YP_008042872.1 COG3287 Uncharacterized conserved protein YP_008042873.1 COG0642 Signal transduction histidine kinase YP_008042874.1 COG2802 Uncharacterized protein, similar to the N-terminal domain of Lon protease YP_008042875.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_008042876.1 COG3850 Signal transduction histidine kinase, nitrate/nitrite-specific YP_008042877.1 COG2896 Molybdenum cofactor biosynthesis enzyme YP_008042878.1 COG1145 Ferredoxin YP_008042879.1 COG3062 Uncharacterized protein involved in formation of periplasmic nitrate reductase YP_008042880.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_008042881.1 COG1145 Ferredoxin YP_008042882.1 COG0348 Polyferredoxin YP_008042883.1 COG3043 Nitrate reductase cytochrome c-type subunit YP_008042884.1 COG3005 Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit YP_008042885.1 COG0521 Molybdopterin biosynthesis enzymes YP_008042886.1 COG0315 Molybdenum cofactor biosynthesis enzyme YP_008042887.1 COG1977 Molybdopterin converting factor, small subunit YP_008042888.1 COG0314 Molybdopterin converting factor, large subunit YP_008042889.1 COG0725 ABC-type molybdate transport system, periplasmic component YP_008042890.1 COG4149 ABC-type molybdate transport system, permease component YP_008042891.1 COG4148 ABC-type molybdate transport system, ATPase component YP_008042892.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_008042893.1 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 YP_008042894.1 COG0303 Molybdopterin biosynthesis enzyme YP_008042895.1 COG0302 GTP cyclohydrolase I YP_008042896.1 COG0840 Methyl-accepting chemotaxis protein YP_008042897.1 COG2759 Formyltetrahydrofolate synthetase YP_008042899.1 COG0583 Transcriptional regulator YP_008042900.1 COG2353 Uncharacterized conserved protein YP_008042902.1 COG0499 S-adenosylhomocysteine hydrolase YP_008042903.1 COG3526 Uncharacterized protein conserved in bacteria YP_008042904.1 COG3176 Putative hemolysin YP_008042905.1 COG2195 Di- and tripeptidases YP_008042906.1 COG1166 Arginine decarboxylase (spermidine biosynthesis) YP_008042908.1 COG0840 Methyl-accepting chemotaxis protein YP_008042909.1 COG0814 Amino acid permeases YP_008042910.1 COG0251 Putative translation initiation inhibitor, yjgF family YP_008042911.1 COG3681 Uncharacterized conserved protein YP_008042912.1 COG2964 Uncharacterized protein conserved in bacteria YP_008042913.1 COG0406 Fructose-2,6-bisphosphatase YP_008042914.1 COG3886 Predicted HKD family nuclease YP_008042916.1 COG0346 Lactoylglutathione lyase and related lyases YP_008042917.1 COG2267 Lysophospholipase YP_008042918.1 COG0334 Glutamate dehydrogenase/leucine dehydrogenase YP_008042920.1 COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases YP_008042921.1 COG2807 Cyanate permease YP_008042922.1 COG0590 Cytosine/adenosine deaminases YP_008042923.1 COG0583 Transcriptional regulator YP_008042924.1 COG0477 Permeases of the major facilitator superfamily YP_008042925.1 COG3708 Uncharacterized protein conserved in bacteria YP_008042927.1 COG1607 Acyl-CoA hydrolase YP_008042929.1 COG2979 Uncharacterized protein conserved in bacteria YP_008042930.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_008042931.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs YP_008042932.1 COG1271 Cytochrome bd-type quinol oxidase, subunit 1 YP_008042933.1 COG1294 Cytochrome bd-type quinol oxidase, subunit 2 YP_008042934.1 COG4890 Predicted outer membrane lipoprotein YP_008042935.1 COG2814 Arabinose efflux permease YP_008042936.1 COG0656 Aldo/keto reductases, related to diketogulonate reductase YP_008042937.1 COG1359 Uncharacterized conserved protein YP_008042938.1 COG3324 Predicted enzyme related to lactoylglutathione lyase YP_008042940.1 COG0583 Transcriptional regulator YP_008042941.1 COG0554 Glycerol kinase YP_008042942.1 COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) YP_008042943.1 COG2271 Sugar phosphate permease YP_008042944.1 COG1349 Transcriptional regulators of sugar metabolism YP_008042945.1 COG0578 Glycerol-3-phosphate dehydrogenase YP_008042946.1 COG0584 Glycerophosphoryl diester phosphodiesterase YP_008042947.1 COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase YP_008042948.1 COG1605 Chorismate mutase YP_008042949.1 COG0583 Transcriptional regulator YP_008042950.1 COG3085 Uncharacterized protein conserved in bacteria YP_008042951.1 COG4574 Serine protease inhibitor ecotin YP_008042954.1 COG4935 Regulatory P domain of the subtilisin-like proprotein convertases and other proteases YP_008042955.1 COG1770 Protease II YP_008042956.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008042957.1 COG3083 Predicted hydrolase of alkaline phosphatase superfamily YP_008042958.1 COG3082 Uncharacterized protein conserved in bacteria YP_008042959.1 COG3081 Nucleoid-associated protein YP_008042960.1 COG2182 Maltose-binding periplasmic proteins/domains YP_008042961.1 COG1175 ABC-type sugar transport systems, permease components YP_008042962.1 COG3833 ABC-type maltose transport systems, permease component YP_008042963.1 COG3839 ABC-type sugar transport systems, ATPase components YP_008042964.1 COG2326 Uncharacterized conserved protein YP_008042965.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_008042966.1 COG3713 Outer membrane protein V YP_008042967.1 COG0628 Predicted permease YP_008042968.1 COG0425 Predicted redox protein, regulator of disulfide bond formation YP_008042969.1 COG4783 Putative Zn-dependent protease, contains TPR repeats YP_008042970.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_008042971.1 COG1393 Arsenate reductase and related proteins, glutaredoxin family YP_008042972.1 COG3308 Predicted membrane protein YP_008042974.1 COG3049 Penicillin V acylase and related amidases YP_008042975.1 COG3124 Uncharacterized protein conserved in bacteria YP_008042976.1 COG0044 Dihydroorotase and related cyclic amidohydrolases YP_008042977.1 COG2431 Predicted membrane protein YP_008042978.1 COG4598 ABC-type histidine transport system, ATPase component YP_008042979.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008042980.1 COG4215 ABC-type arginine transport system, permease component YP_008042981.1 COG4160 ABC-type arginine/histidine transport system, permease component YP_008042982.1 COG3235 Predicted membrane protein YP_008042983.1 COG1180 Pyruvate-formate lyase-activating enzyme YP_008042984.1 COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain YP_008042985.1 COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases YP_008042986.1 COG1226 Kef-type K+ transport systems, predicted NAD-binding component YP_008042988.1 COG1566 Multidrug resistance efflux pump YP_008042989.1 COG1538 Outer membrane protein YP_008042990.1 COG0628 Predicted permease YP_008042991.1 COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase YP_008042992.1 COG2373 Large extracellular alpha-helical protein YP_008042993.1 COG4953 Membrane carboxypeptidase/penicillin-binding protein PbpC YP_008042995.1 COG0301 Thiamine biosynthesis ATP pyrophosphatase YP_008042997.1 COG2860 Predicted membrane protein YP_008042998.1 COG1344 Flagellin and related hook-associated proteins YP_008042999.1 COG1344 Flagellin and related hook-associated proteins YP_008043000.1 COG2801 Transposase and inactivated derivatives YP_008043001.1 COG2963 Transposase and inactivated derivatives YP_008043002.1 COG1344 Flagellin and related hook-associated proteins YP_008043003.1 COG1334 Uncharacterized flagellar protein FlaG YP_008043004.1 COG1345 Flagellar capping protein YP_008043005.1 COG1516 Flagellin-specific chaperone FliS YP_008043009.1 COG2230 Cyclopropane fatty acid synthase and related methyltransferases YP_008043011.1 COG2089 Sialic acid synthase YP_008043012.1 COG3980 Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase YP_008043013.1 COG0001 Glutamate-1-semialdehyde aminotransferase YP_008043014.1 COG1861 Spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase homolog YP_008043015.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) YP_008043016.1 COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis YP_008043017.1 COG1086 Predicted nucleoside-diphosphate sugar epimerases YP_008043018.1 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component YP_008043019.1 COG1270 Cobalamin biosynthesis protein CobD/CbiB YP_008043020.1 COG0775 Nucleoside phosphorylase YP_008043021.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008043022.1 COG0428 Predicted divalent heavy-metal cations transporter YP_008043023.1 COG0840 Methyl-accepting chemotaxis protein YP_008043024.1 COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family YP_008043026.1 COG0625 Glutathione S-transferase YP_008043027.1 COG0477 Permeases of the major facilitator superfamily YP_008043028.1 COG3027 Uncharacterized protein conserved in bacteria YP_008043029.1 COG3079 Uncharacterized protein conserved in bacteria YP_008043030.1 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases YP_008043031.1 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases YP_008043032.1 COG0404 Glycine cleavage system T protein (aminomethyltransferase) YP_008043033.1 COG0509 Glycine cleavage system H protein (lipoate-binding) YP_008043034.1 COG0403 Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain YP_008043035.1 COG0640 Predicted transcriptional regulators YP_008043036.1 COG0798 Arsenite efflux pump ACR3 and related permeases YP_008043037.1 COG1393 Arsenate reductase and related proteins, glutaredoxin family YP_008043038.1 COG0500 SAM-dependent methyltransferases YP_008043040.1 COG0477 Permeases of the major facilitator superfamily YP_008043041.1 COG3634 Alkyl hydroperoxide reductase, large subunit YP_008043042.1 COG0450 Peroxiredoxin YP_008043043.1 COG0517 FOG: CBS domain YP_008043044.1 COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) YP_008043045.1 COG0343 Queuine/archaeosine tRNA-ribosyltransferase YP_008043046.1 COG1862 Preprotein translocase subunit YajC YP_008043047.1 COG0342 Preprotein translocase subunit SecD YP_008043048.1 COG0341 Preprotein translocase subunit SecF YP_008043049.1 COG0607 Rhodanese-related sulfurtransferase YP_008043050.1 COG4785 Lipoprotein NlpI, contains TPR repeats YP_008043051.1 COG0826 Collagenase and related proteases YP_008043052.1 COG0826 Collagenase and related proteases YP_008043054.1 COG3154 Putative lipid carrier protein YP_008043056.1 COG0565 rRNA methylase YP_008043057.1 COG1959 Predicted transcriptional regulator YP_008043058.1 COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes YP_008043059.1 COG0822 NifU homolog involved in Fe-S cluster formation YP_008043060.1 COG0316 Uncharacterized conserved protein YP_008043061.1 COG1076 DnaJ-domain-containing proteins 1 YP_008043062.1 COG0443 Molecular chaperone YP_008043063.1 COG0633 Ferredoxin YP_008043064.1 COG0260 Leucyl aminopeptidase YP_008043065.1 COG0260 Leucyl aminopeptidase YP_008043066.1 COG0105 Nucleoside diphosphate kinase YP_008043067.1 COG0820 Predicted Fe-S-cluster redox enzyme YP_008043068.1 COG3063 Tfp pilus assembly protein PilF YP_008043069.1 COG1426 Uncharacterized protein conserved in bacteria YP_008043070.1 COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis YP_008043071.1 COG0124 Histidyl-tRNA synthetase YP_008043072.1 COG2976 Uncharacterized protein conserved in bacteria YP_008043073.1 COG1520 FOG: WD40-like repeat YP_008043074.1 COG1160 Predicted GTPases YP_008043076.1 COG4623 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein YP_008043077.1 COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain YP_008043078.1 COG3676 Transposase and inactivated derivatives YP_008043079.1 COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N) YP_008043080.1 COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M) YP_008043081.1 COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit YP_008043082.1 COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) YP_008043083.1 COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J) YP_008043084.1 COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) YP_008043085.1 COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H) YP_008043086.1 COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) YP_008043087.1 COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit YP_008043088.1 COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit YP_008043089.1 COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit YP_008043090.1 COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases YP_008043091.1 COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A) YP_008043092.1 COG1360 Flagellar motor protein YP_008043093.1 COG1291 Flagellar motor component YP_008043094.1 COG3762 Predicted membrane protein YP_008043095.1 COG1512 Beta-propeller domains of methanol dehydrogenase type YP_008043096.1 COG1704 Uncharacterized conserved protein YP_008043097.1 COG3770 Murein endopeptidase YP_008043099.1 COG0724 RNA-binding proteins (RRM domain) YP_008043100.1 COG4989 Predicted oxidoreductase YP_008043101.1 COG2932 Predicted transcriptional regulator YP_008043102.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008043103.1 COG2008 Threonine aldolase YP_008043104.1 COG2202 FOG: PAS/PAC domain YP_008043105.1 COG0784 FOG: CheY-like receiver YP_008043106.1 COG0583 Transcriptional regulator YP_008043109.1 COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain YP_008043110.1 COG0778 Nitroreductase YP_008043112.1 COG3102 Uncharacterized protein conserved in bacteria YP_008043113.1 COG0477 Permeases of the major facilitator superfamily YP_008043114.1 COG0583 Transcriptional regulator YP_008043115.1 COG0583 Transcriptional regulator YP_008043116.1 COG0807 GTP cyclohydrolase II YP_008043117.1 COG0283 Cytidylate kinase YP_008043118.1 COG0539 Ribosomal protein S1 YP_008043119.1 COG0776 Bacterial nucleoid DNA-binding protein YP_008043120.1 COG3771 Predicted membrane protein YP_008043121.1 COG2956 Predicted N-acetylglucosaminyl transferase YP_008043122.1 COG0284 Orotidine-5'-phosphate decarboxylase YP_008043123.1 COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) YP_008043124.1 COG3148 Uncharacterized conserved protein YP_008043125.1 COG0603 Predicted PP-loop superfamily ATPase YP_008043126.1 COG0602 Organic radical activating enzymes YP_008043127.1 COG3530 Uncharacterized protein conserved in bacteria YP_008043128.1 COG2096 Uncharacterized conserved protein YP_008043129.1 COG2916 DNA-binding protein H-NS YP_008043130.1 COG1757 Na+/H+ antiporter YP_008043131.1 COG1435 Thymidine kinase YP_008043132.1 COG3930 Uncharacterized protein conserved in bacteria YP_008043134.1 COG3157 Hemolysin-coregulated protein (uncharacterized) YP_008043135.1 COG3501 Uncharacterized protein conserved in bacteria YP_008043136.1 COG3179 Predicted chitinase YP_008043138.1 COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase YP_008043139.1 COG1278 Cold shock proteins YP_008043140.1 COG2127 Uncharacterized conserved protein YP_008043141.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_008043142.1 COG0361 Translation initiation factor 1 (IF-1) YP_008043143.1 COG2935 Putative arginyl-tRNA:protein arginylyltransferase YP_008043144.1 COG2360 Leu/Phe-tRNA-protein transferase YP_008043146.1 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain YP_008043147.1 COG0492 Thioredoxin reductase YP_008043148.1 COG1522 Transcriptional regulators YP_008043149.1 COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins YP_008043150.1 COG2834 Outer membrane lipoprotein-sorting protein YP_008043151.1 COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase YP_008043152.1 COG0172 Seryl-tRNA synthetase YP_008043153.1 COG1286 Uncharacterized membrane protein, required for colicin V production YP_008043154.1 COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase YP_008043155.1 COG4445 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA YP_008043156.1 COG4167 ABC-type antimicrobial peptide transport system, ATPase component YP_008043157.1 COG4170 ABC-type antimicrobial peptide transport system, ATPase component YP_008043158.1 COG4171 ABC-type antimicrobial peptide transport system, permease component YP_008043159.1 COG4168 ABC-type antimicrobial peptide transport system, permease component YP_008043160.1 COG4166 ABC-type oligopeptide transport system, periplasmic component YP_008043161.1 COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain YP_008043162.1 COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription YP_008043164.1 COG1983 Putative stress-responsive transcriptional regulator YP_008043165.1 COG3106 Predicted ATPase YP_008043166.1 COG3768 Predicted membrane protein YP_008043167.1 COG3186 Phenylalanine-4-hydroxylase YP_008043168.1 COG2154 Pterin-4a-carbinolamine dehydratase YP_008043170.1 COG3283 Transcriptional regulator of aromatic amino acids metabolism YP_008043172.1 COG2199 FOG: GGDEF domain YP_008043173.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_008043174.1 COG0861 Membrane protein TerC, possibly involved in tellurium resistance YP_008043175.1 COG3199 Uncharacterized conserved protein YP_008043177.1 COG1022 Long-chain acyl-CoA synthetases (AMP-forming) YP_008043178.1 COG0295 Cytidine deaminase YP_008043179.1 COG1346 Putative effector of murein hydrolase YP_008043180.1 COG1380 Putative effector of murein hydrolase LrgA YP_008043181.1 COG3345 Alpha-galactosidase YP_008043183.1 COG2925 Exonuclease I YP_008043184.1 COG2160 L-arabinose isomerase YP_008043185.1 COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases YP_008043186.1 COG1069 Ribulose kinase YP_008043187.1 COG1879 ABC-type sugar transport system, periplasmic component YP_008043188.1 COG1129 ABC-type sugar transport system, ATPase component YP_008043189.1 COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components YP_008043190.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_008043191.1 COG0583 Transcriptional regulator YP_008043192.1 COG1741 Pirin-related protein YP_008043193.1 COG0257 Ribosomal protein L36 YP_008043194.1 COG0254 Ribosomal protein L31 YP_008043197.1 COG1451 Predicted metal-dependent hydrolase YP_008043199.1 COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases YP_008043200.1 COG3069 C4-dicarboxylate transporter YP_008043201.1 COG5661 Predicted secreted Zn-dependent protease YP_008043202.1 COG4121 Uncharacterized conserved protein YP_008043203.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_008043204.1 COG0456 Acetyltransferases YP_008043206.1 COG0372 Citrate synthase YP_008043208.1 COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit YP_008043209.1 COG2142 Succinate dehydrogenase, hydrophobic anchor subunit YP_008043210.1 COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit YP_008043211.1 COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit YP_008043212.1 COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes YP_008043213.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_008043214.1 COG0045 Succinyl-CoA synthetase, beta subunit YP_008043215.1 COG0074 Succinyl-CoA synthetase, alpha subunit YP_008043217.1 COG2983 Uncharacterized conserved protein YP_008043218.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_008043219.1 COG1178 ABC-type Fe3+ transport system, permease component YP_008043220.1 COG3842 ABC-type spermidine/putrescine transport systems, ATPase components YP_008043221.1 COG1840 ABC-type Fe3+ transport system, periplasmic component YP_008043222.1 COG2188 Transcriptional regulators YP_008043223.1 COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase YP_008043224.1 COG0160 4-aminobutyrate aminotransferase and related aminotransferases YP_008043225.1 COG0637 Predicted phosphatase/phosphohexomutase YP_008043226.1 COG1882 Pyruvate-formate lyase YP_008043227.1 COG2116 Formate/nitrite family of transporters YP_008043228.1 COG1944 Uncharacterized conserved protein YP_008043229.1 COG2076 Membrane transporters of cations and cationic drugs YP_008043230.1 COG0136 Aspartate-semialdehyde dehydrogenase YP_008043231.1 COG0612 Predicted Zn-dependent peptidases YP_008043232.1 COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases YP_008043233.1 COG3491 Isopenicillin N synthase and related dioxygenases YP_008043234.1 COG2910 Putative NADH-flavin reductase YP_008043235.1 COG0583 Transcriptional regulator YP_008043236.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008043237.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_008043238.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008043240.1 COG0583 Transcriptional regulator YP_008043241.1 COG0620 Methionine synthase II (cobalamin-independent) YP_008043242.1 COG0859 ADP-heptose:LPS heptosyltransferase YP_008043243.1 COG3448 CBS-domain-containing membrane protein YP_008043244.1 COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold YP_008043245.1 COG1309 Transcriptional regulator YP_008043246.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_008043247.1 COG3046 Uncharacterized protein related to deoxyribodipyrimidine photolyase YP_008043248.1 COG4338 Uncharacterized protein conserved in bacteria YP_008043249.1 COG3033 Tryptophanase YP_008043250.1 COG1686 D-alanyl-D-alanine carboxypeptidase YP_008043251.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_008043252.1 COG3088 Uncharacterized protein involved in biosynthesis of c-type cytochromes YP_008043253.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_008043254.1 COG1138 Cytochrome c biogenesis factor YP_008043255.1 COG3301 Formate-dependent nitrite reductase, membrane component YP_008043256.1 COG0437 Fe-S-cluster-containing hydrogenase components 1 YP_008043258.1 COG3303 Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit YP_008043261.1 COG0247 Fe-S oxidoreductase YP_008043262.1 COG3075 Anaerobic glycerol-3-phosphate dehydrogenase YP_008043263.1 COG0578 Glycerol-3-phosphate dehydrogenase YP_008043264.1 COG3012 Uncharacterized protein conserved in bacteria YP_008043265.1 COG0840 Methyl-accepting chemotaxis protein YP_008043266.1 COG1940 Transcriptional regulator/sugar kinase YP_008043267.1 COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism YP_008043268.1 COG4565 Response regulator of citrate/malate metabolism YP_008043269.1 COG3333 Uncharacterized protein conserved in bacteria YP_008043271.1 COG3181 Uncharacterized protein conserved in bacteria YP_008043272.1 COG4623 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein YP_008043273.1 COG2985 Predicted permease YP_008043274.1 COG0556 Helicase subunit of the DNA excision repair complex YP_008043275.1 COG3339 Uncharacterized conserved protein YP_008043276.1 COG0586 Uncharacterized membrane-associated protein YP_008043277.1 COG1495 Disulfide bond formation protein DsbB YP_008043278.1 COG3067 Na+/H+ antiporter YP_008043279.1 COG2186 Transcriptional regulators YP_008043280.1 COG2719 Uncharacterized conserved protein YP_008043281.1 COG2718 Uncharacterized conserved protein YP_008043282.1 COG2766 Putative Ser protein kinase YP_008043283.1 COG0514 Superfamily II DNA helicase YP_008043284.1 COG3633 Na+/serine symporter YP_008043285.1 COG0814 Amino acid permeases YP_008043286.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_008043287.1 COG0147 Anthranilate/para-aminobenzoate synthases component I YP_008043288.1 COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain YP_008043289.1 COG5404 SOS-response cell division inhibitor, blocks FtsZ ring formation YP_008043291.1 COG0058 Glucan phosphorylase YP_008043292.1 COG0471 Di- and tricarboxylate transporters YP_008043293.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_008043294.1 COG0642 Signal transduction histidine kinase YP_008043295.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_008043297.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_008043299.1 COG2501 Uncharacterized conserved protein YP_008043300.1 COG2030 Acyl dehydratase YP_008043301.1 COG3243 Poly(3-hydroxyalkanoate) synthetase YP_008043305.1 COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase YP_008043306.1 COG2329 Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides YP_008043307.1 COG0371 Glycerol dehydrogenase and related enzymes YP_008043308.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_008043309.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_008043310.1 COG1437 Adenylate cyclase, class 2 (thermophilic) YP_008043312.1 COG1742 Uncharacterized conserved protein YP_008043313.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_008043314.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_008043315.1 COG0513 Superfamily II DNA and RNA helicases YP_008043316.1 COG0386 Glutathione peroxidase YP_008043317.1 COG3751 Predicted proline hydroxylase YP_008043318.1 COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes YP_008043319.1 COG3324 Predicted enzyme related to lactoylglutathione lyase YP_008043320.1 COG3148 Uncharacterized conserved protein YP_008043322.1 COG0730 Predicted permeases YP_008043323.1 COG0583 Transcriptional regulator YP_008043324.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_008043325.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_008043326.1 COG3593 Predicted ATP-dependent endonuclease of the OLD family YP_008043328.1 COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases YP_008043329.1 COG0260 Leucyl aminopeptidase YP_008043330.1 COG1011 Predicted hydrolase (HAD superfamily) YP_008043331.1 COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase YP_008043332.1 COG0205 6-phosphofructokinase YP_008043333.1 COG0149 Triosephosphate isomerase YP_008043334.1 COG1434 Uncharacterized conserved protein YP_008043335.1 COG0500 SAM-dependent methyltransferases YP_008043336.1 COG3006 Uncharacterized protein involved in chromosome partitioning YP_008043337.1 COG3095 Uncharacterized protein involved in chromosome partitioning YP_008043338.1 COG3096 Uncharacterized protein involved in chromosome partitioning YP_008043339.1 COG0797 Lipoproteins YP_008043340.1 COG1359 Uncharacterized conserved protein YP_008043341.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_008043342.1 COG0242 N-formylmethionyl-tRNA deformylase YP_008043345.1 COG0384 Predicted epimerase, PhzC/PhzF homolog YP_008043346.1 COG1075 Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold YP_008043349.1 COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism YP_008043350.1 COG0500 SAM-dependent methyltransferases YP_008043351.1 COG3979 Uncharacterized protein contain chitin-binding domain type 3 YP_008043352.1 COG3324 Predicted enzyme related to lactoylglutathione lyase YP_008043353.1 COG3791 Uncharacterized conserved protein YP_008043354.1 COG0406 Fructose-2,6-bisphosphatase YP_008043355.1 COG2202 FOG: PAS/PAC domain YP_008043356.1 COG3832 Uncharacterized conserved protein YP_008043357.1 COG2840 Uncharacterized protein conserved in bacteria YP_008043358.1 COG2890 Methylase of polypeptide chain release factors YP_008043359.1 COG0082 Chorismate synthase YP_008043360.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008043361.1 COG0513 Superfamily II DNA and RNA helicases YP_008043365.1 COG0814 Amino acid permeases YP_008043366.1 COG1609 Transcriptional regulators YP_008043367.1 COG4668 Mannitol/fructose-specific phosphotransferase system, IIA domain YP_008043368.1 COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) YP_008043369.1 COG1445 Phosphotransferase system fructose-specific component IIB YP_008043370.1 COG2140 Thermophilic glucose-6-phosphate isomerase and related metalloenzymes YP_008043371.1 COG1609 Transcriptional regulators YP_008043372.1 COG1482 Phosphomannose isomerase YP_008043373.1 COG2893 Phosphotransferase system, mannose/fructose-specific component IIA YP_008043374.1 COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB YP_008043375.1 COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC YP_008043376.1 COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID YP_008043377.1 COG2942 N-acyl-D-glucosamine 2-epimerase YP_008043378.1 COG3313 Predicted Fe-S protein YP_008043379.1 COG2821 Membrane-bound lytic murein transglycosylase YP_008043380.1 COG0633 Ferredoxin YP_008043381.1 COG0208 Ribonucleotide reductase, beta subunit YP_008043382.1 COG0209 Ribonucleotide reductase, alpha subunit YP_008043383.1 COG0546 Predicted phosphatases YP_008043384.1 COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase YP_008043385.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_008043387.1 COG1533 DNA repair photolyase YP_008043388.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_008043389.1 COG0441 Threonyl-tRNA synthetase YP_008043390.1 COG0290 Translation initiation factor 3 (IF-3) YP_008043391.1 COG0291 Ribosomal protein L35 YP_008043392.1 COG0292 Ribosomal protein L20 YP_008043393.1 COG0016 Phenylalanyl-tRNA synthetase alpha subunit YP_008043394.1 COG0073 EMAP domain YP_008043395.1 COG0776 Bacterial nucleoid DNA-binding protein YP_008043396.1 COG0642 Signal transduction histidine kinase YP_008043397.1 COG1129 ABC-type sugar transport system, ATPase component YP_008043398.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_008043399.1 COG0846 NAD-dependent protein deacetylases, SIR2 family YP_008043400.1 COG3915 Uncharacterized protein conserved in bacteria YP_008043401.1 COG2199 FOG: GGDEF domain YP_008043402.1 COG1609 Transcriptional regulators YP_008043403.1 COG0524 Sugar kinases, ribokinase family YP_008043404.1 COG1879 ABC-type sugar transport system, periplasmic component YP_008043405.1 COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components YP_008043406.1 COG1129 ABC-type sugar transport system, ATPase component YP_008043407.1 COG1869 ABC-type ribose transport system, auxiliary component YP_008043408.1 COG0625 Glutathione S-transferase YP_008043409.1 COG4603 ABC-type uncharacterized transport system, permease component YP_008043411.1 COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control YP_008043412.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins YP_008043413.1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases YP_008043414.1 COG2836 Uncharacterized conserved protein YP_008043415.1 COG3197 Uncharacterized protein, possibly involved in nitrogen fixation YP_008043416.1 COG2217 Cation transport ATPase YP_008043417.1 COG3198 Uncharacterized protein conserved in bacteria YP_008043418.1 COG2010 Cytochrome c, mono- and diheme variants YP_008043419.1 COG4736 Cbb3-type cytochrome oxidase, subunit 3 YP_008043420.1 COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit YP_008043421.1 COG3278 Cbb3-type cytochrome oxidase, subunit 1 YP_008043423.1 COG1956 GAF domain-containing protein YP_008043424.1 COG3109 Activator of osmoprotectant transporter ProP YP_008043425.1 COG0793 Periplasmic protease YP_008043426.1 COG0308 Aminopeptidase N YP_008043428.1 COG2902 NAD-specific glutamate dehydrogenase YP_008043429.1 COG0167 Dihydroorotate dehydrogenase YP_008043431.1 COG0116 Predicted N6-adenine-specific DNA methylase YP_008043432.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_008043433.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_008043435.1 COG3130 Ribosome modulation factor YP_008043436.1 COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases YP_008043437.1 COG1067 Predicted ATP-dependent protease YP_008043438.1 COG0582 Integrase YP_008043439.1 COG3141 Uncharacterized protein conserved in bacteria YP_008043440.1 COG1075 Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold YP_008043441.1 COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes YP_008043442.1 COG3937 Uncharacterized conserved protein YP_008043443.1 COG1752 Predicted esterase of the alpha-beta hydrolase superfamily YP_008043444.1 COG1309 Transcriptional regulator YP_008043445.1 COG0457 FOG: TPR repeat YP_008043446.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_008043449.1 COG2079 Uncharacterized protein involved in propionate catabolism YP_008043450.1 COG0372 Citrate synthase YP_008043451.1 COG2513 PEP phosphonomutase and related enzymes YP_008043452.1 COG2995 Uncharacterized paraquat-inducible protein A YP_008043453.1 COG2995 Uncharacterized paraquat-inducible protein A YP_008043454.1 COG3008 Paraquat-inducible protein B YP_008043455.1 COG0144 tRNA and rRNA cytosine-C5-methylases YP_008043457.1 COG0582 Integrase YP_008043458.1 COG0084 Mg-dependent DNase YP_008043459.1 COG0470 ATPase involved in DNA replication YP_008043460.1 COG0125 Thymidylate kinase YP_008043461.1 COG1559 Predicted periplasmic solute-binding protein YP_008043462.1 COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase YP_008043463.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_008043464.1 COG0236 Acyl carrier protein YP_008043465.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008043466.1 COG0331 (acyl-carrier-protein) S-malonyltransferase YP_008043467.1 COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III YP_008043468.1 COG0416 Fatty acid/phospholipid biosynthesis enzyme YP_008043469.1 COG0333 Ribosomal protein L32 YP_008043470.1 COG1399 Predicted metal-binding, possibly nucleic acid-binding protein YP_008043472.1 COG0583 Transcriptional regulator YP_008043473.1 COG0477 Permeases of the major facilitator superfamily YP_008043474.1 COG0424 Nucleotide-binding protein implicated in inhibition of septum formation YP_008043475.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_008043476.1 COG1530 Ribonucleases G and E YP_008043477.1 COG0306 Phosphate/sulphate permeases YP_008043478.1 COG0717 Deoxycytidine deaminase YP_008043479.1 COG0572 Uridine kinase YP_008043480.1 COG0489 ATPases involved in chromosome partitioning YP_008043481.1 COG0143 Methionyl-tRNA synthetase YP_008043482.1 COG0625 Glutathione S-transferase YP_008043483.1 COG1254 Acylphosphatases YP_008043484.1 COG0840 Methyl-accepting chemotaxis protein YP_008043485.1 COG1092 Predicted SAM-dependent methyltransferases YP_008043486.1 COG0625 Glutathione S-transferase YP_008043487.1 COG1835 Predicted acyltransferases YP_008043489.1 COG0709 Selenophosphate synthase YP_008043490.1 COG2603 Predicted ATPase YP_008043491.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_008043492.1 COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain YP_008043493.1 COG0642 Signal transduction histidine kinase YP_008043494.1 COG1825 Ribosomal protein L25 (general stress protein Ctc) YP_008043496.1 COG1643 HrpA-like helicases YP_008043497.1 COG0517 FOG: CBS domain YP_008043498.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_008043499.1 COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family YP_008043500.1 COG0718 Uncharacterized protein conserved in bacteria YP_008043501.1 COG2812 DNA polymerase III, gamma/tau subunits YP_008043502.1 COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins YP_008043503.1 COG2832 Uncharacterized protein conserved in bacteria YP_008043504.1 COG0042 tRNA-dihydrouridine synthase YP_008043505.1 COG1734 DnaK suppressor protein YP_008043506.1 COG1961 Site-specific recombinases, DNA invertase Pin homologs YP_008043508.1 COG1961 Site-specific recombinases, DNA invertase Pin homologs YP_008043517.1 COG0561 Predicted hydrolases of the HAD superfamily YP_008043527.1 COG1192 ATPases involved in chromosome partitioning YP_008043528.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008043529.1 COG0349 Ribonuclease D YP_008043530.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_008043531.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_008043532.1 COG3065 Starvation-inducible outer membrane lipoprotein YP_008043533.1 COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone YP_008043534.1 COG1199 Rad3-related DNA helicases YP_008043536.1 COG0040 ATP phosphoribosyltransferase YP_008043537.1 COG0141 Histidinol dehydrogenase YP_008043538.1 COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase YP_008043539.1 COG0241 Histidinol phosphatase and related phosphatases YP_008043540.1 COG0118 Glutamine amidotransferase YP_008043541.1 COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase YP_008043542.1 COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain YP_008043543.1 COG2202 FOG: PAS/PAC domain YP_008043544.1 COG2202 FOG: PAS/PAC domain YP_008043545.1 COG0107 Imidazoleglycerol-phosphate synthase YP_008043546.1 COG0139 Phosphoribosyl-AMP cyclohydrolase YP_008043547.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_008043548.1 COG1288 Predicted membrane protein YP_008043550.1 COG3134 Predicted outer membrane lipoprotein YP_008043551.1 COG2374 Predicted extracellular nuclease YP_008043552.1 COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs YP_008043553.1 COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs YP_008043554.1 COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs YP_008043555.1 COG2252 Permeases YP_008043556.1 COG0402 Cytosine deaminase and related metal-dependent hydrolases YP_008043557.1 COG2233 Xanthine/uracil permeases YP_008043558.1 COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs YP_008043559.1 COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs YP_008043560.1 COG0402 Cytosine deaminase and related metal-dependent hydrolases YP_008043561.1 COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases YP_008043562.1 COG2068 Uncharacterized MobA-related protein YP_008043564.1 COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family YP_008043565.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_008043566.1 COG0549 Carbamate kinase YP_008043567.1 COG0044 Dihydroorotase and related cyclic amidohydrolases YP_008043568.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_008043569.1 COG1171 Threonine dehydratase YP_008043570.1 COG0078 Ornithine carbamoyltransferase YP_008043571.1 COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains YP_008043572.1 COG4388 Mu-like prophage I protein YP_008043573.1 COG5005 Mu-like prophage protein gpG YP_008043575.1 COG4383 Mu-like prophage protein gp29 YP_008043576.1 COG0679 Predicted permeases YP_008043577.1 COG4681 Uncharacterized protein conserved in bacteria YP_008043579.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_008043580.1 COG0183 Acetyl-CoA acetyltransferase YP_008043581.1 COG0714 MoxR-like ATPases YP_008043582.1 COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) YP_008043584.1 COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain YP_008043587.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_008043589.1 COG2067 Long-chain fatty acid transport protein YP_008043590.1 COG3434 Predicted signal transduction protein containing EAL and modified HD-GYP domains YP_008043591.1 COG0183 Acetyl-CoA acetyltransferase YP_008043592.1 COG0789 Predicted transcriptional regulators YP_008043593.1 COG1301 Na+/H+-dicarboxylate symporters YP_008043594.1 COG3123 Uncharacterized protein conserved in bacteria YP_008043595.1 COG1760 L-serine deaminase YP_008043596.1 COG1760 L-serine deaminase YP_008043597.1 COG2951 Membrane-bound lytic murein transglycosylase B YP_008043598.1 COG3100 Uncharacterized protein conserved in bacteria YP_008043599.1 COG0850 Septum formation inhibitor YP_008043600.1 COG2894 Septum formation inhibitor-activating ATPase YP_008043601.1 COG0851 Septum formation topological specificity factor YP_008043602.1 COG3099 Uncharacterized protein conserved in bacteria YP_008043603.1 COG0744 Membrane carboxypeptidase (penicillin-binding protein) YP_008043604.1 COG3099 Uncharacterized protein conserved in bacteria YP_008043605.1 COG3313 Predicted Fe-S protein YP_008043606.1 COG2996 Uncharacterized protein conserved in bacteria YP_008043608.1 COG1846 Transcriptional regulators YP_008043611.1 COG1182 Acyl carrier protein phosphodiesterase YP_008043612.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_008043613.1 COG0027 Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) YP_008043614.1 COG0637 Predicted phosphatase/phosphohexomutase YP_008043615.1 COG0119 Isopropylmalate/homocitrate/citramalate synthases YP_008043616.1 COG0307 Riboflavin synthase alpha chain YP_008043618.1 COG0534 Na+-driven multidrug efflux pump YP_008043619.1 COG0417 DNA polymerase elongation subunit (family B) YP_008043621.1 COG2199 FOG: GGDEF domain YP_008043622.1 COG3981 Predicted acetyltransferase YP_008043623.1 COG1718 Serine/threonine protein kinase involved in cell cycle control YP_008043624.1 COG1560 Lauroyl/myristoyl acyltransferase YP_008043625.1 COG1560 Lauroyl/myristoyl acyltransferase YP_008043626.1 COG1275 Tellurite resistance protein and related permeases YP_008043627.1 COG0583 Transcriptional regulator YP_008043628.1 COG0673 Predicted dehydrogenases and related proteins YP_008043629.1 COG0648 Endonuclease IV YP_008043630.1 COG0583 Transcriptional regulator YP_008043631.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008043632.1 COG2206 HD-GYP domain YP_008043633.1 COG3915 Uncharacterized protein conserved in bacteria YP_008043634.1 COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain YP_008043635.1 COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase YP_008043636.1 COG0583 Transcriptional regulator YP_008043637.1 COG2199 FOG: GGDEF domain YP_008043638.1 COG0656 Aldo/keto reductases, related to diketogulonate reductase YP_008043640.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) YP_008043641.1 COG0583 Transcriptional regulator YP_008043642.1 COG0702 Predicted nucleoside-diphosphate-sugar epimerases YP_008043643.1 COG1073 Hydrolases of the alpha/beta superfamily YP_008043644.1 COG1073 Hydrolases of the alpha/beta superfamily YP_008043645.1 COG0583 Transcriptional regulator YP_008043647.1 COG1961 Site-specific recombinases, DNA invertase Pin homologs YP_008043649.1 COG2003 DNA repair proteins YP_008043650.1 COG1451 Predicted metal-dependent hydrolase YP_008043651.1 COG0642 Signal transduction histidine kinase YP_008043652.1 COG0784 FOG: CheY-like receiver YP_008043653.1 COG0358 DNA primase (bacterial type) YP_008043654.1 COG0582 Integrase YP_008043655.1 COG0730 Predicted permeases YP_008043656.1 COG0531 Amino acid transporters YP_008043657.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008043658.1 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases YP_008043659.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_008043660.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_008043661.1 COG1960 Acyl-CoA dehydrogenases YP_008043662.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_008043663.1 COG1960 Acyl-CoA dehydrogenases YP_008043664.1 COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) YP_008043665.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_008043666.1 COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit YP_008043667.1 COG0119 Isopropylmalate/homocitrate/citramalate synthases YP_008043668.1 COG0789 Predicted transcriptional regulators YP_008043669.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008043670.1 COG1584 Predicted membrane protein YP_008043671.1 COG3228 Uncharacterized protein conserved in bacteria YP_008043672.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_008043673.1 COG1115 Na+/alanine symporter YP_008043674.1 COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase YP_008043677.1 COG0210 Superfamily I DNA and RNA helicases YP_008043679.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_008043680.1 COG2905 Predicted signal-transduction protein containing cAMP-binding and CBS domains YP_008043681.1 COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases YP_008043682.1 COG3162 Predicted membrane protein YP_008043683.1 COG4147 Predicted symporter YP_008043684.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_008043685.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_008043686.1 COG0776 Bacterial nucleoid DNA-binding protein YP_008043687.1 COG0466 ATP-dependent Lon protease, bacterial type YP_008043688.1 COG1219 ATP-dependent protease Clp, ATPase subunit YP_008043689.1 COG0740 Protease subunit of ATP-dependent Clp proteases YP_008043690.1 COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) YP_008043691.1 COG3304 Predicted membrane protein YP_008043692.1 COG1896 Predicted hydrolases of HD superfamily YP_008043693.1 COG4591 ABC-type transport system, involved in lipoprotein release, permease component YP_008043694.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_008043695.1 COG4591 ABC-type transport system, involved in lipoprotein release, permease component YP_008043697.1 COG1197 Transcription-repair coupling factor (superfamily II helicase) YP_008043698.1 COG0158 Fructose-1,6-bisphosphatase YP_008043699.1 COG4166 ABC-type oligopeptide transport system, periplasmic component YP_008043700.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_008043702.1 COG2062 Phosphohistidine phosphatase SixA YP_008043703.1 COG1025 Secreted/periplasmic Zn-dependent peptidases, insulinase-like YP_008043704.1 COG0500 SAM-dependent methyltransferases YP_008043705.1 COG4886 Leucine-rich repeat (LRR) protein YP_008043706.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008043707.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_008043708.1 COG3593 Predicted ATP-dependent endonuclease of the OLD family YP_008043711.1 COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III YP_008043713.1 COG0606 Predicted ATPase with chaperone activity YP_008043714.1 COG3598 RecA-family ATPase YP_008043715.1 COG3311 Predicted transcriptional regulator YP_008043717.1 COG0582 Integrase YP_008043718.1 COG0518 GMP synthase - Glutamine amidotransferase domain YP_008043719.1 COG0516 IMP dehydrogenase/GMP reductase YP_008043720.1 COG3158 K+ transporter YP_008043721.1 COG0810 Periplasmic protein TonB, links inner and outer membranes YP_008043722.1 COG0811 Biopolymer transport proteins YP_008043723.1 COG0848 Biopolymer transport protein YP_008043724.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_008043725.1 COG1570 Exonuclease VII, large subunit YP_008043726.1 COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases YP_008043727.1 COG0840 Methyl-accepting chemotaxis protein YP_008043728.1 COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase YP_008043729.1 COG0128 5-enolpyruvylshikimate-3-phosphate synthase YP_008043730.1 COG1932 Phosphoserine aminotransferase YP_008043731.1 COG2025 Electron transfer flavoprotein, alpha subunit YP_008043732.1 COG2086 Electron transfer flavoprotein, beta subunit YP_008043733.1 COG0644 Dehydrogenases (flavoproteins) YP_008043734.1 COG0598 Mg2+ and Co2+ transporters YP_008043737.1 COG2814 Arabinose efflux permease YP_008043738.1 COG4771 Outer membrane receptor for ferrienterochelin and colicins YP_008043739.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component YP_008043740.1 COG4779 ABC-type enterobactin transport system, permease component YP_008043741.1 COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components YP_008043742.1 COG2977 Phosphopantetheinyl transferase component of siderophore synthetase YP_008043743.1 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component YP_008043744.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_008043745.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_008043746.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008043747.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_008043748.1 COG1535 Isochorismate hydrolase YP_008043749.1 COG1021 Peptide arylation enzymes YP_008043750.1 COG1169 Isochorismate synthase YP_008043753.1 COG0448 ADP-glucose pyrophosphorylase YP_008043756.1 COG0524 Sugar kinases, ribokinase family YP_008043757.1 COG3788 Uncharacterized relative of glutathione S-transferase, MAPEG superfamily YP_008043758.1 COG0276 Protoheme ferro-lyase (ferrochelatase) YP_008043759.1 COG0563 Adenylate kinase and related kinases YP_008043760.1 COG0326 Molecular chaperone, HSP90 family YP_008043761.1 COG0353 Recombinational DNA repair protein (RecF pathway) YP_008043762.1 COG1526 Uncharacterized protein required for formate dehydrogenase activity YP_008043763.1 COG3604 Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains YP_008043765.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_008043766.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_008043767.1 COG1142 Fe-S-cluster-containing hydrogenase components 2 YP_008043769.1 COG3158 K+ transporter YP_008043770.1 COG1142 Fe-S-cluster-containing hydrogenase components 2 YP_008043771.1 COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit YP_008043772.1 COG0650 Formate hydrogenlyase subunit 4 YP_008043773.1 COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit YP_008043774.1 COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) YP_008043775.1 COG3260 Ni,Fe-hydrogenase III small subunit YP_008043777.1 COG0680 Ni,Fe-hydrogenase maturation factor YP_008043778.1 COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase] YP_008043779.1 COG3276 Selenocysteine-specific translation elongation factor YP_008043780.1 COG0068 Hydrogenase maturation factor YP_008043781.1 COG0298 Hydrogenase maturation factor YP_008043782.1 COG0409 Hydrogenase maturation factor YP_008043783.1 COG0309 Hydrogenase maturation factor YP_008043784.1 COG0375 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) YP_008043786.1 COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase YP_008043787.1 COG1124 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component YP_008043788.1 COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase YP_008043789.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_008043790.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_008043791.1 COG0747 ABC-type dipeptide transport system, periplasmic component YP_008043793.1 COG0680 Ni,Fe-hydrogenase maturation factor YP_008043794.1 COG0374 Ni,Fe-hydrogenase I large subunit YP_008043795.1 COG5557 Polysulphide reductase YP_008043796.1 COG0437 Fe-S-cluster-containing hydrogenase components 1 YP_008043797.1 COG1740 Ni,Fe-hydrogenase I small subunit YP_008043798.1 COG0784 FOG: CheY-like receiver YP_008043800.1 COG0643 Chemotaxis protein histidine kinase and related kinases YP_008043801.1 COG0840 Methyl-accepting chemotaxis protein YP_008043802.1 COG0835 Chemotaxis signal transduction protein YP_008043803.1 COG1352 Methylase of chemotaxis methyl-accepting proteins YP_008043804.1 COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain YP_008043805.1 COG0784 FOG: CheY-like receiver YP_008043806.1 COG0840 Methyl-accepting chemotaxis protein YP_008043807.1 COG0787 Alanine racemase YP_008043808.1 COG3382 Uncharacterized conserved protein YP_008043809.1 COG1396 Predicted transcriptional regulators YP_008043810.1 COG2801 Transposase and inactivated derivatives YP_008043811.1 COG2963 Transposase and inactivated derivatives YP_008043812.1 COG2963 Transposase and inactivated derivatives YP_008043814.1 COG2801 Transposase and inactivated derivatives YP_008043815.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008043816.1 COG3598 RecA-family ATPase YP_008043818.1 COG0582 Integrase YP_008043819.1 COG0582 Integrase YP_008043820.1 COG0582 Integrase YP_008043821.1 COG0659 Sulfate permease and related transporters (MFS superfamily) YP_008043822.1 COG2862 Predicted membrane protein YP_008043824.1 COG3391 Uncharacterized conserved protein YP_008043825.1 COG0672 High-affinity Fe2+/Pb2+ permease YP_008043826.1 COG1232 Protoporphyrinogen oxidase YP_008043829.1 COG0477 Permeases of the major facilitator superfamily YP_008043831.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_008043832.1 COG0577 ABC-type antimicrobial peptide transport system, permease component YP_008043833.1 COG5621 Predicted secreted hydrolase YP_008043834.1 COG0277 FAD/FMN-containing dehydrogenases YP_008043835.1 COG1556 Uncharacterized conserved protein YP_008043836.1 COG1139 Uncharacterized conserved protein containing a ferredoxin-like domain YP_008043837.1 COG0247 Fe-S oxidoreductase YP_008043838.1 COG1620 L-lactate permease YP_008043839.1 COG0583 Transcriptional regulator YP_008043840.1 COG4321 Uncharacterized protein related to arylsulfate sulfotransferase involved in siderophore biosynthesis YP_008043841.1 COG0346 Lactoylglutathione lyase and related lyases YP_008043842.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_008043843.1 COG2315 Uncharacterized protein conserved in bacteria YP_008043844.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_008043847.1 COG0225 Peptide methionine sulfoxide reductase YP_008043848.1 COG0548 Acetylglutamate kinase YP_008043849.1 COG0527 Aspartokinases YP_008043850.1 COG0661 Predicted unusual protein kinase YP_008043851.1 COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily YP_008043852.1 COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF YP_008043853.1 COG4667 Predicted esterase of the alpha-beta hydrolase superfamily YP_008043854.1 COG1145 Ferredoxin YP_008043855.1 COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases YP_008043856.1 COG2221 Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits YP_008043857.1 COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) YP_008043859.1 COG0393 Uncharacterized conserved protein YP_008043863.1 COG1252 NADH dehydrogenase, FAD-containing subunit YP_008043864.1 COG3150 Predicted esterase YP_008043865.1 COG2233 Xanthine/uracil permeases YP_008043866.1 COG1164 Oligoendopeptidase F YP_008043867.1 COG1164 Oligoendopeptidase F YP_008043868.1 COG2354 Uncharacterized protein conserved in bacteria YP_008043869.1 COG3803 Uncharacterized protein conserved in bacteria YP_008043870.1 COG0341 Preprotein translocase subunit SecF YP_008043871.1 COG0342 Preprotein translocase subunit SecD YP_008043874.1 COG0510 Predicted choline kinase involved in LPS biosynthesis YP_008043875.1 COG3417 Collagen-binding surface adhesin SpaP (antigen I/II family) YP_008043876.1 COG5633 Predicted periplasmic lipoprotein YP_008043877.1 COG3014 Uncharacterized protein conserved in bacteria YP_008043878.1 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases YP_008043879.1 COG0840 Methyl-accepting chemotaxis protein YP_008043880.1 COG0720 6-pyruvoyl-tetrahydropterin synthase YP_008043881.1 COG0044 Dihydroorotase and related cyclic amidohydrolases YP_008043883.1 COG1301 Na+/H+-dicarboxylate symporters YP_008043884.1 COG2020 Putative protein-S-isoprenylcysteine methyltransferase YP_008043885.1 COG0787 Alanine racemase YP_008043886.1 COG0861 Membrane protein TerC, possibly involved in tellurium resistance YP_008043887.1 COG4608 ABC-type oligopeptide transport system, ATPase component YP_008043889.1 COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component YP_008043890.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_008043891.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_008043892.1 COG4166 ABC-type oligopeptide transport system, periplasmic component YP_008043893.1 COG2095 Multiple antibiotic transporter YP_008043894.1 COG4340 Uncharacterized protein conserved in bacteria YP_008043895.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_008043896.1 COG2206 HD-GYP domain YP_008043897.1 COG3275 Putative regulator of cell autolysis YP_008043898.1 COG3279 Response regulator of the LytR/AlgR family YP_008043899.1 COG1966 Carbon starvation protein, predicted membrane protein YP_008043901.1 COG1566 Multidrug resistance efflux pump YP_008043902.1 COG1061 DNA or RNA helicases of superfamily II YP_008043903.1 COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) YP_008043904.1 COG0695 Glutaredoxin and related proteins YP_008043905.1 COG4728 Uncharacterized protein conserved in bacteria YP_008043906.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_008043907.1 COG1288 Predicted membrane protein YP_008043908.1 COG3007 Uncharacterized paraquat-inducible protein B YP_008043909.1 COG2202 FOG: PAS/PAC domain YP_008043911.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_008043912.1 COG4657 Predicted NADH:ubiquinone oxidoreductase, subunit RnfA YP_008043913.1 COG2878 Predicted NADH:ubiquinone oxidoreductase, subunit RnfB YP_008043914.1 COG4656 Predicted NADH:ubiquinone oxidoreductase, subunit RnfC YP_008043915.1 COG4658 Predicted NADH:ubiquinone oxidoreductase, subunit RnfD YP_008043916.1 COG4659 Predicted NADH:ubiquinone oxidoreductase, subunit RnfG YP_008043917.1 COG4660 Predicted NADH:ubiquinone oxidoreductase, subunit RnfE YP_008043918.1 COG0177 Predicted EndoIII-related endonuclease YP_008043919.1 COG0346 Lactoylglutathione lyase and related lyases YP_008043920.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_008043921.1 COG0840 Methyl-accepting chemotaxis protein YP_008043922.1 COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases YP_008043923.1 COG2056 Predicted permease YP_008043924.1 COG0513 Superfamily II DNA and RNA helicases YP_008043925.1 COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism YP_008043927.1 COG0277 FAD/FMN-containing dehydrogenases YP_008043928.1 COG3965 Predicted Co/Zn/Cd cation transporters YP_008043929.1 COG0861 Membrane protein TerC, possibly involved in tellurium resistance YP_008043930.1 COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family YP_008043931.1 COG1816 Adenosine deaminase YP_008043932.1 COG0647 Predicted sugar phosphatases of the HAD superfamily YP_008043933.1 COG4651 Kef-type K+ transport system, predicted NAD-binding component YP_008043934.1 COG3450 Predicted enzyme of the cupin superfamily YP_008043935.1 COG0367 Asparagine synthase (glutamine-hydrolyzing) YP_008043936.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_008043937.1 COG0625 Glutathione S-transferase YP_008043938.1 COG0625 Glutathione S-transferase YP_008043939.1 COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) YP_008043940.1 COG3508 Homogentisate 1,2-dioxygenase YP_008043941.1 COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins YP_008043942.1 COG0560 Phosphoserine phosphatase YP_008043943.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_008043944.1 COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components YP_008043945.1 COG2202 FOG: PAS/PAC domain YP_008043946.1 COG3946 Type IV secretory pathway, VirJ component YP_008043947.1 COG0392 Predicted integral membrane protein YP_008043949.1 COG2194 Predicted membrane-associated, metal-dependent hydrolase YP_008043950.1 COG4705 Uncharacterized membrane-anchored protein conserved in bacteria YP_008043951.1 COG0477 Permeases of the major facilitator superfamily YP_008043952.1 COG0670 Integral membrane protein, interacts with FtsH YP_008043953.1 COG1289 Predicted membrane protein YP_008043954.1 COG2920 Dissimilatory sulfite reductase (desulfoviridin), gamma subunit YP_008043955.1 COG3147 Uncharacterized protein conserved in bacteria YP_008043956.1 COG0285 Folylpolyglutamate synthase YP_008043957.1 COG0777 Acetyl-CoA carboxylase beta subunit YP_008043958.1 COG0101 Pseudouridylate synthase YP_008043959.1 COG3170 Tfp pilus assembly protein FimV YP_008043960.1 COG0136 Aspartate-semialdehyde dehydrogenase YP_008043961.1 COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases YP_008043962.1 COG0671 Membrane-associated phospholipid phosphatase YP_008043963.1 COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen YP_008043964.1 COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold YP_008043965.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_008043966.1 COG3038 Cytochrome B561 YP_008043968.1 COG1335 Amidases related to nicotinamidase YP_008043969.1 COG1404 Subtilisin-like serine proteases YP_008043971.1 COG1472 Beta-glucosidase-related glycosidases YP_008043972.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_008043973.1 COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase YP_008043974.1 COG1806 Uncharacterized protein conserved in bacteria YP_008043976.1 COG1113 Gamma-aminobutyrate permease and related permeases YP_008043977.1 COG2968 Uncharacterized conserved protein YP_008043979.1 COG2931 RTX toxins and related Ca2+-binding proteins YP_008043982.1 COG2199 FOG: GGDEF domain YP_008043983.1 COG3672 Predicted periplasmic protein YP_008043984.1 COG1538 Outer membrane protein YP_008043985.1 COG0845 Membrane-fusion protein YP_008043986.1 COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain YP_008043987.1 COG1242 Predicted Fe-S oxidoreductase YP_008043988.1 COG0067 Glutamate synthase domain 1 YP_008043989.1 COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases YP_008043990.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_008043991.1 COG0765 ABC-type amino acid transport system, permease component YP_008043992.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008043994.1 COG4122 Predicted O-methyltransferase YP_008043995.1 COG0789 Predicted transcriptional regulators YP_008044000.1 COG0513 Superfamily II DNA and RNA helicases YP_008044001.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_008044002.1 COG0586 Uncharacterized membrane-associated protein YP_008044003.1 COG3322 Predicted periplasmic ligand-binding sensor domain YP_008044005.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_008044007.1 COG0119 Isopropylmalate/homocitrate/citramalate synthases YP_008044008.1 COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) YP_008044009.1 COG0505 Carbamoylphosphate synthase small subunit YP_008044010.1 COG0289 Dihydrodipicolinate reductase YP_008044011.1 COG1757 Na+/H+ antiporter YP_008044012.1 COG0212 5-formyltetrahydrofolate cyclo-ligase YP_008044013.1 COG0120 Ribose 5-phosphate isomerase YP_008044014.1 COG0120 Ribose 5-phosphate isomerase YP_008044015.1 COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases YP_008044016.1 COG0818 Diacylglycerol kinase YP_008044017.1 COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase YP_008044018.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_008044019.1 COG4138 ABC-type cobalamin transport system, ATPase component YP_008044020.1 COG4139 ABC-type cobalamin transport system, permease component YP_008044021.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008044022.1 COG3169 Uncharacterized protein conserved in bacteria YP_008044023.1 COG5008 Tfp pilus assembly protein, ATPase PilU YP_008044024.1 COG0448 ADP-glucose pyrophosphorylase YP_008044027.1 COG0370 Fe2+ transport system protein B YP_008044028.1 COG1918 Fe2+ transport system protein A YP_008044029.1 COG0023 Translation initiation factor 1 (eIF-1/SUI1) and related proteins YP_008044030.1 COG2119 Predicted membrane protein YP_008044033.1 COG4929 Uncharacterized membrane-anchored protein YP_008044034.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008044035.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008044036.1 COG2199 FOG: GGDEF domain YP_008044039.1 COG0215 Cysteinyl-tRNA synthetase YP_008044040.1 COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family YP_008044042.1 COG2908 Uncharacterized protein conserved in bacteria YP_008044043.1 COG3301 Formate-dependent nitrite reductase, membrane component YP_008044044.1 COG0437 Fe-S-cluster-containing hydrogenase components 1 YP_008044046.1 COG2863 Cytochrome c553 YP_008044051.1 COG1835 Predicted acyltransferases YP_008044053.1 COG3500 Phage protein D YP_008044054.1 COG3059 Predicted membrane protein YP_008044055.1 COG2128 Uncharacterized conserved protein YP_008044057.1 COG2801 Transposase and inactivated derivatives YP_008044059.1 COG2963 Transposase and inactivated derivatives YP_008044060.1 COG3039 Transposase and inactivated derivatives, IS5 family YP_008044061.1 COG3718 Uncharacterized enzyme involved in inositol metabolism YP_008044062.1 COG1082 Sugar phosphate isomerases/epimerases YP_008044063.1 COG0524 Sugar kinases, ribokinase family YP_008044064.1 COG0673 Predicted dehydrogenases and related proteins YP_008044065.1 COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components YP_008044066.1 COG1129 ABC-type sugar transport system, ATPase component YP_008044067.1 COG1879 ABC-type sugar transport system, periplasmic component YP_008044068.1 COG0673 Predicted dehydrogenases and related proteins YP_008044069.1 COG2963 Transposase and inactivated derivatives YP_008044070.1 COG2801 Transposase and inactivated derivatives YP_008044071.1 COG3962 Acetolactate synthase YP_008044072.1 COG1737 Transcriptional regulators YP_008044073.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_008044074.1 COG0582 Integrase YP_008044075.1 COG3436 Transposase and inactivated derivatives YP_008044076.1 COG5519 Superfamily II helicase and inactivated derivatives YP_008044079.1 COG3311 Predicted transcriptional regulator YP_008044080.1 COG0582 Integrase YP_008044081.1 COG0558 Phosphatidylglycerophosphate synthase YP_008044082.1 COG0322 Nuclease subunit of the excinuclease complex YP_008044083.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_008044084.1 COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase YP_008044085.1 COG2835 Uncharacterized conserved protein YP_008044086.1 COG1663 Tetraacyldisaccharide-1-P 4'-kinase YP_008044087.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_008044088.1 COG0658 Predicted membrane metal-binding protein YP_008044090.1 COG1396 Predicted transcriptional regulators YP_008044091.1 COG0133 Tryptophan synthase beta chain YP_008044093.1 COG3177 Uncharacterized conserved protein YP_008044095.1 COG2916 DNA-binding protein H-NS YP_008044096.1 COG5642 Uncharacterized conserved protein YP_008044097.1 COG2213 Phosphotransferase system, mannitol-specific IIBC component YP_008044098.1 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 YP_008044100.1 COG1271 Cytochrome bd-type quinol oxidase, subunit 1 YP_008044101.1 COG5006 Predicted permease, DMT superfamily YP_008044102.1 COG1522 Transcriptional regulators YP_008044104.1 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase YP_008044105.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs YP_008044106.1 COG3382 Uncharacterized conserved protein YP_008044109.1 COG0515 Serine/threonine protein kinase YP_008044114.1 COG0658 Predicted membrane metal-binding protein YP_008044115.1 COG3216 Uncharacterized protein conserved in bacteria YP_008044116.1 COG3216 Uncharacterized protein conserved in bacteria YP_008044117.1 COG0433 Predicted ATPase YP_008044118.1 COG1448 Aspartate/tyrosine/aromatic aminotransferase YP_008044120.1 COG3203 Outer membrane protein (porin) YP_008044121.1 COG1199 Rad3-related DNA helicases YP_008044122.1 COG3110 Uncharacterized protein conserved in bacteria YP_008044123.1 COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein YP_008044124.1 COG0477 Permeases of the major facilitator superfamily YP_008044125.1 COG1161 Predicted GTPases YP_008044126.1 COG1785 Alkaline phosphatase YP_008044127.1 COG1785 Alkaline phosphatase YP_008044129.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008044131.1 COG0782 Transcription elongation factor YP_008044132.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_008044133.1 COG3851 Signal transduction histidine kinase, glucose-6-phosphate specific YP_008044134.1 COG2271 Sugar phosphate permease YP_008044135.1 COG2199 FOG: GGDEF domain YP_008044136.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008044137.1 COG0765 ABC-type amino acid transport system, permease component YP_008044138.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_008044139.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008044140.1 COG3000 Sterol desaturase YP_008044141.1 COG0531 Amino acid transporters YP_008044142.1 COG2040 Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) YP_008044144.1 COG1253 Hemolysins and related proteins containing CBS domains YP_008044145.1 COG0704 Phosphate uptake regulator YP_008044146.1 COG1117 ABC-type phosphate transport system, ATPase component YP_008044147.1 COG4985 ABC-type phosphate transport system, auxiliary component YP_008044148.1 COG4590 ABC-type uncharacterized transport system, permease component YP_008044149.1 COG0590 Cytosine/adenosine deaminases YP_008044150.1 COG2225 Malate synthase YP_008044151.1 COG2224 Isocitrate lyase YP_008044152.1 COG0593 ATPase involved in DNA replication initiation YP_008044153.1 COG3249 Uncharacterized protein conserved in bacteria YP_008044154.1 COG0035 Uracil phosphoribosyltransferase YP_008044155.1 COG0150 Phosphoribosylaminoimidazole (AIR) synthetase YP_008044156.1 COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN YP_008044157.1 COG0327 Uncharacterized conserved protein YP_008044158.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_008044159.1 COG0642 Signal transduction histidine kinase YP_008044160.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_008044161.1 COG0551 Zn-finger domain associated with topoisomerase type I YP_008044162.1 COG2716 Glycine cleavage system regulatory protein YP_008044163.1 COG0855 Polyphosphate kinase YP_008044164.1 COG0248 Exopolyphosphatase YP_008044165.1 COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) YP_008044166.1 COG1344 Flagellin and related hook-associated proteins YP_008044167.1 COG1256 Flagellar hook-associated protein YP_008044168.1 COG3951 Rod binding protein YP_008044169.1 COG1706 Flagellar basal-body P-ring protein YP_008044170.1 COG2063 Flagellar basal body L-ring protein YP_008044171.1 COG4786 Flagellar basal body rod protein YP_008044172.1 COG4787 Flagellar basal body rod protein YP_008044173.1 COG1749 Flagellar hook protein FlgE YP_008044174.1 COG1843 Flagellar hook capping protein YP_008044175.1 COG1558 Flagellar basal body rod protein YP_008044176.1 COG1815 Flagellar basal body protein YP_008044177.1 COG1352 Methylase of chemotaxis methyl-accepting proteins YP_008044178.1 COG0835 Chemotaxis signal transduction protein YP_008044179.1 COG1261 Flagellar basal body P-ring biosynthesis protein YP_008044180.1 COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor) YP_008044181.1 COG3418 Flagellar biosynthesis/type III secretory pathway chaperone YP_008044182.1 COG0622 Predicted phosphoesterase YP_008044183.1 COG4166 ABC-type oligopeptide transport system, periplasmic component YP_008044184.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_008044185.1 COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases YP_008044186.1 COG2206 HD-GYP domain YP_008044188.1 COG0176 Transaldolase YP_008044189.1 COG1180 Pyruvate-formate lyase-activating enzyme YP_008044190.1 COG1882 Pyruvate-formate lyase YP_008044191.1 COG1349 Transcriptional regulators of sugar metabolism YP_008044192.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_008044193.1 COG0747 ABC-type dipeptide transport system, periplasmic component YP_008044198.1 COG1278 Cold shock proteins YP_008044199.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_008044200.1 COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit YP_008044201.1 COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit YP_008044202.1 COG2988 Succinylglutamate desuccinylase YP_008044205.1 COG0553 Superfamily II DNA/RNA helicases, SNF2 family YP_008044206.1 COG3132 Uncharacterized protein conserved in bacteria YP_008044207.1 COG3307 Lipid A core - O-antigen ligase and related enzymes YP_008044213.1 COG1596 Periplasmic protein involved in polysaccharide export YP_008044214.1 COG3765 Chain length determinant protein YP_008044215.1 COG1898 dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes YP_008044216.1 COG1209 dTDP-glucose pyrophosphorylase YP_008044217.1 COG1091 dTDP-4-dehydrorhamnose reductase YP_008044218.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase YP_008044219.1 COG1109 Phosphomannomutase YP_008044220.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_008044221.1 COG0836 Mannose-1-phosphate guanylyltransferase YP_008044222.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_008044223.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_008044224.1 COG1089 GDP-D-mannose dehydratase YP_008044225.1 COG0438 Glycosyltransferase YP_008044226.1 COG0438 Glycosyltransferase YP_008044227.1 COG0438 Glycosyltransferase YP_008044228.1 COG0110 Acetyltransferase (isoleucine patch superfamily) YP_008044230.1 COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis YP_008044231.1 COG0110 Acetyltransferase (isoleucine patch superfamily) YP_008044232.1 COG1131 ABC-type multidrug transport system, ATPase component YP_008044233.1 COG1209 dTDP-glucose pyrophosphorylase YP_008044234.1 COG1088 dTDP-D-glucose 4,6-dehydratase YP_008044235.1 COG0841 Cation/multidrug efflux pump YP_008044236.1 COG0845 Membrane-fusion protein YP_008044237.1 COG1309 Transcriptional regulator YP_008044238.1 COG0500 SAM-dependent methyltransferases YP_008044239.1 COG1301 Na+/H+-dicarboxylate symporters YP_008044240.1 COG1946 Acyl-CoA thioesterase YP_008044241.1 COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases YP_008044242.1 COG1386 Predicted transcriptional regulator containing the HTH domain YP_008044243.1 COG1354 Uncharacterized conserved protein YP_008044244.1 COG0009 Putative translation factor (SUA5) YP_008044245.1 COG0613 Predicted metal-dependent phosphoesterases (PHP family) YP_008044246.1 COG0147 Anthranilate/para-aminobenzoate synthases component I YP_008044247.1 COG0512 Anthranilate/para-aminobenzoate synthases component II YP_008044248.1 COG0547 Anthranilate phosphoribosyltransferase YP_008044249.1 COG0134 Indole-3-glycerol phosphate synthase YP_008044250.1 COG0133 Tryptophan synthase beta chain YP_008044251.1 COG0159 Tryptophan synthase alpha chain YP_008044258.1 COG1972 Nucleoside permease YP_008044259.1 COG0457 FOG: TPR repeat YP_008044260.1 COG1482 Phosphomannose isomerase YP_008044262.1 COG3311 Predicted transcriptional regulator YP_008044265.1 COG1335 Amidases related to nicotinamidase YP_008044266.1 COG0074 Succinyl-CoA synthetase, alpha subunit YP_008044268.1 COG0549 Carbamate kinase YP_008044270.1 COG1457 Purine-cytosine permease and related proteins YP_008044271.1 COG0583 Transcriptional regulator YP_008044272.1 COG1396 Predicted transcriptional regulators YP_008044274.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008044279.1 COG2003 DNA repair proteins YP_008044286.1 COG3381 Uncharacterized component of anaerobic dehydrogenases YP_008044287.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_008044288.1 COG3005 Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit YP_008044289.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008044290.1 COG3791 Uncharacterized conserved protein YP_008044291.1 COG1879 ABC-type sugar transport system, periplasmic component YP_008044292.1 COG0642 Signal transduction histidine kinase YP_008044293.1 COG0477 Permeases of the major facilitator superfamily YP_008044294.1 COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor) YP_008044295.1 COG3125 Heme/copper-type cytochrome/quinol oxidase, subunit 4 YP_008044296.1 COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3 YP_008044297.1 COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1 YP_008044298.1 COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2 YP_008044299.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_008044300.1 COG2010 Cytochrome c, mono- and diheme variants YP_008044302.1 COG1957 Inosine-uridine nucleoside N-ribohydrolase YP_008044303.1 COG3758 Uncharacterized protein conserved in bacteria YP_008044305.1 COG3241 Azurin YP_008044306.1 COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis YP_008044307.1 COG0477 Permeases of the major facilitator superfamily YP_008044308.1 COG0784 FOG: CheY-like receiver YP_008044309.1 COG1357 Uncharacterized low-complexity proteins YP_008044310.1 COG0708 Exonuclease III YP_008044311.1 COG0845 Membrane-fusion protein YP_008044312.1 COG0841 Cation/multidrug efflux pump YP_008044314.1 COG0845 Membrane-fusion protein YP_008044315.1 COG3696 Putative silver efflux pump YP_008044316.1 COG5569 Uncharacterized conserved protein YP_008044318.1 COG0076 Glutamate decarboxylase and related PLP-dependent proteins YP_008044319.1 COG0095 Lipoate-protein ligase A YP_008044320.1 COG2199 FOG: GGDEF domain YP_008044321.1 COG0841 Cation/multidrug efflux pump YP_008044322.1 COG0845 Membrane-fusion protein YP_008044323.1 COG2391 Predicted transporter component YP_008044324.1 COG2391 Predicted transporter component YP_008044325.1 COG0640 Predicted transcriptional regulators YP_008044326.1 COG0607 Rhodanese-related sulfurtransferase YP_008044328.1 COG1285 Uncharacterized membrane protein YP_008044329.1 COG1609 Transcriptional regulators YP_008044330.1 COG1621 Beta-fructosidases (levanase/invertase) YP_008044331.1 COG1264 Phosphotransferase system IIB components YP_008044332.1 COG0524 Sugar kinases, ribokinase family YP_008044333.1 COG4580 Maltoporin (phage lambda and maltose receptor) YP_008044334.1 COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain YP_008044335.1 COG0443 Molecular chaperone YP_008044336.1 COG0576 Molecular chaperone GrpE (heat shock protein) YP_008044337.1 COG0061 Predicted sugar kinase YP_008044338.1 COG0497 ATPase involved in DNA repair YP_008044340.1 COG1227 Inorganic pyrophosphatase/exopolyphosphatase YP_008044341.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins YP_008044342.1 COG0845 Membrane-fusion protein YP_008044343.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_008044344.1 COG1538 Outer membrane protein YP_008044345.1 COG2375 Siderophore-interacting protein YP_008044346.1 COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase YP_008044347.1 COG2916 DNA-binding protein H-NS YP_008044348.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_008044349.1 COG3832 Uncharacterized conserved protein YP_008044350.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_008044351.1 COG1396 Predicted transcriptional regulators YP_008044352.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_008044353.1 COG0160 4-aminobutyrate aminotransferase and related aminotransferases YP_008044354.1 COG0531 Amino acid transporters YP_008044356.1 COG0531 Amino acid transporters YP_008044358.1 COG1283 Na+/phosphate symporter YP_008044359.1 COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 YP_008044360.1 COG3384 Uncharacterized conserved protein YP_008044361.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008044362.1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases YP_008044363.1 COG0477 Permeases of the major facilitator superfamily YP_008044364.1 COG0813 Purine-nucleoside phosphorylase YP_008044366.1 COG4938 Uncharacterized conserved protein YP_008044367.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_008044370.1 COG4319 Ketosteroid isomerase homolog YP_008044371.1 COG0498 Threonine synthase YP_008044372.1 COG0083 Homoserine kinase YP_008044373.1 COG0527 Aspartokinases YP_008044374.1 COG0565 rRNA methylase YP_008044375.1 COG4579 Isocitrate dehydrogenase kinase/phosphatase YP_008044376.1 COG3187 Heat shock protein YP_008044378.1 COG0684 Demethylmenaquinone methyltransferase YP_008044380.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008044381.1 COG4988 ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components YP_008044382.1 COG4987 ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components YP_008044384.1 COG3189 Uncharacterized conserved protein YP_008044385.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_008044386.1 COG1720 Uncharacterized conserved protein YP_008044387.1 COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III YP_008044388.1 COG3825 Uncharacterized protein conserved in bacteria YP_008044389.1 COG0714 MoxR-like ATPases YP_008044390.1 COG0031 Cysteine synthase YP_008044391.1 COG1925 Phosphotransferase system, HPr-related proteins YP_008044392.1 COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) YP_008044393.1 COG2190 Phosphotransferase system IIA components YP_008044394.1 COG2199 FOG: GGDEF domain YP_008044396.1 COG3038 Cytochrome B561 YP_008044397.1 COG1664 Integral membrane protein CcmA involved in cell shape determination YP_008044398.1 COG0419 ATPase involved in DNA repair YP_008044399.1 COG0419 ATPase involved in DNA repair YP_008044400.1 COG0420 DNA repair exonuclease YP_008044401.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_008044402.1 COG2974 DNA recombination-dependent growth factor C YP_008044403.1 COG0405 Gamma-glutamyltransferase YP_008044404.1 COG4651 Kef-type K+ transport system, predicted NAD-binding component YP_008044405.1 COG2234 Predicted aminopeptidases YP_008044407.1 COG0469 Pyruvate kinase YP_008044408.1 COG3264 Small-conductance mechanosensitive channel YP_008044410.1 COG2706 3-carboxymuconate cyclase YP_008044411.1 COG2233 Xanthine/uracil permeases YP_008044412.1 COG1372 Intein/homing endonuclease YP_008044413.1 COG4520 Surface antigen YP_008044414.1 COG0281 Malic enzyme YP_008044415.1 COG0784 FOG: CheY-like receiver YP_008044416.1 COG2864 Cytochrome b subunit of formate dehydrogenase YP_008044417.1 COG0437 Fe-S-cluster-containing hydrogenase components 1 YP_008044418.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_008044420.1 COG3381 Uncharacterized component of anaerobic dehydrogenases YP_008044421.1 COG1145 Ferredoxin YP_008044425.1 COG1526 Uncharacterized protein required for formate dehydrogenase activity YP_008044426.1 COG1910 Periplasmic molybdate-binding protein/domain YP_008044427.1 COG0840 Methyl-accepting chemotaxis protein YP_008044428.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_008044429.1 COG2998 ABC-type tungstate transport system, permease component YP_008044430.1 COG4662 ABC-type tungstate transport system, periplasmic component YP_008044431.1 COG1122 ABC-type cobalt transport system, ATPase component YP_008044432.1 COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A YP_008044433.1 COG1763 Molybdopterin-guanine dinucleotide biosynthesis protein YP_008044434.1 COG1289 Predicted membrane protein YP_008044435.1 COG2206 HD-GYP domain YP_008044437.1 COG2202 FOG: PAS/PAC domain YP_008044438.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_008044439.1 COG2259 Predicted membrane protein YP_008044441.1 COG3220 Uncharacterized protein conserved in bacteria YP_008044442.1 COG5572 Predicted integral membrane protein YP_008044445.1 COG0642 Signal transduction histidine kinase YP_008044446.1 COG0747 ABC-type dipeptide transport system, periplasmic component YP_008044447.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_008044448.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_008044449.1 COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component YP_008044450.1 COG4608 ABC-type oligopeptide transport system, ATPase component YP_008044452.1 COG2971 Predicted N-acetylglucosamine kinase YP_008044453.1 COG3525 N-acetyl-beta-hexosaminidase YP_008044454.1 COG2202 FOG: PAS/PAC domain YP_008044455.1 COG3695 Predicted methylated DNA-protein cysteine methyltransferase YP_008044457.1 COG0550 Topoisomerase IA YP_008044458.1 COG3724 Succinylarginine dihydrolase YP_008044459.1 COG0616 Periplasmic serine proteases (ClpP class) YP_008044460.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008044461.1 COG0583 Transcriptional regulator YP_008044462.1 COG0477 Permeases of the major facilitator superfamily YP_008044463.1 COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities YP_008044464.1 COG2358 TRAP-type uncharacterized transport system, periplasmic component YP_008044465.1 COG0583 Transcriptional regulator YP_008044466.1 COG0104 Adenylosuccinate synthase YP_008044467.1 COG1881 Phospholipid-binding protein YP_008044468.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_008044469.1 COG3408 Glycogen debranching enzyme YP_008044470.1 COG0162 Tyrosyl-tRNA synthetase YP_008044471.1 COG0739 Membrane proteins related to metalloendopeptidases YP_008044472.1 COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases YP_008044473.1 COG0693 Putative intracellular protease/amidase YP_008044474.1 COG0251 Putative translation initiation inhibitor, yjgF family YP_008044475.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_008044476.1 COG2200 FOG: EAL domain YP_008044477.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008044478.1 COG0021 Transketolase YP_008044479.1 COG0192 S-adenosylmethionine synthetase YP_008044480.1 COG3091 Uncharacterized protein conserved in bacteria YP_008044481.1 COG2356 Endonuclease I YP_008044482.1 COG1385 Uncharacterized protein conserved in bacteria YP_008044483.1 COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) YP_008044484.1 COG0840 Methyl-accepting chemotaxis protein YP_008044485.1 COG1678 Putative transcriptional regulator YP_008044486.1 COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) YP_008044487.1 COG3104 Dipeptide/tripeptide permease YP_008044488.1 COG1680 Beta-lactamase class C and other penicillin binding proteins YP_008044489.1 COG0714 MoxR-like ATPases YP_008044490.1 COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) YP_008044491.1 COG1305 Transglutaminase-like enzymes, putative cysteine proteases YP_008044492.1 COG1115 Na+/alanine symporter YP_008044493.1 COG0176 Transaldolase YP_008044495.1 COG3945 Uncharacterized conserved protein YP_008044496.1 COG0692 Uracil DNA glycosylase YP_008044497.1 COG3445 Acid-induced glycyl radical enzyme YP_008044498.1 COG1301 Na+/H+-dicarboxylate symporters YP_008044499.1 COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase YP_008044500.1 COG2912 Uncharacterized conserved protein YP_008044501.1 COG3094 Uncharacterized protein conserved in bacteria YP_008044502.1 COG2890 Methylase of polypeptide chain release factors YP_008044503.1 COG0216 Protein chain release factor A YP_008044504.1 COG0373 Glutamyl-tRNA reductase YP_008044505.1 COG3017 Outer membrane lipoprotein involved in outer membrane biogenesis YP_008044506.1 COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase YP_008044507.1 COG0462 Phosphoribosylpyrophosphate synthetase YP_008044508.1 COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases YP_008044509.1 COG0193 Peptidyl-tRNA hydrolase YP_008044510.1 COG0012 Predicted GTPase, probable translation factor YP_008044511.1 COG0471 Di- and tricarboxylate transporters YP_008044512.1 COG3201 Nicotinamide mononucleotide transporter YP_008044513.1 COG2820 Uridine phosphorylase YP_008044514.1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases YP_008044515.1 COG3097 Uncharacterized protein conserved in bacteria YP_008044516.1 COG4828 Predicted membrane protein YP_008044517.1 COG0366 Glycosidases YP_008044519.1 COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit YP_008044520.1 COG0477 Permeases of the major facilitator superfamily YP_008044521.1 COG0637 Predicted phosphatase/phosphohexomutase YP_008044523.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_008044524.1 COG3138 Arginine/ornithine N-succinyltransferase beta subunit YP_008044525.1 COG4992 Ornithine/acetylornithine aminotransferase YP_008044526.1 COG0512 Anthranilate/para-aminobenzoate synthases component II YP_008044528.1 COG0180 Tryptophanyl-tRNA synthetase YP_008044529.1 COG0546 Predicted phosphatases YP_008044530.1 COG0036 Pentose-5-phosphate-3-epimerase YP_008044531.1 COG0338 Site-specific DNA methylase YP_008044532.1 COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis YP_008044533.1 COG0337 3-dehydroquinate synthetase YP_008044534.1 COG0703 Shikimate kinase YP_008044535.1 COG4796 Type II secretory pathway, component HofQ YP_008044536.1 COG3168 Tfp pilus assembly protein PilP YP_008044537.1 COG3167 Tfp pilus assembly protein PilO YP_008044538.1 COG3166 Tfp pilus assembly protein PilN YP_008044539.1 COG4972 Tfp pilus assembly protein, ATPase PilM YP_008044540.1 COG5009 Membrane carboxypeptidase/penicillin-binding protein YP_008044541.1 COG0583 Transcriptional regulator YP_008044542.1 COG0840 Methyl-accepting chemotaxis protein YP_008044543.1 COG3531 Predicted protein-disulfide isomerase YP_008044544.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_008044545.1 COG0583 Transcriptional regulator YP_008044548.1 COG0739 Membrane proteins related to metalloendopeptidases YP_008044549.1 COG0534 Na+-driven multidrug efflux pump YP_008044550.1 COG3264 Small-conductance mechanosensitive channel YP_008044551.1 COG0584 Glycerophosphoryl diester phosphodiesterase YP_008044552.1 COG0840 Methyl-accepting chemotaxis protein YP_008044553.1 COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit YP_008044554.1 COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit YP_008044555.1 COG3029 Fumarate reductase subunit C YP_008044556.1 COG3080 Fumarate reductase subunit D YP_008044558.1 COG1309 Transcriptional regulator YP_008044559.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008044560.1 COG3214 Uncharacterized protein conserved in bacteria YP_008044561.1 COG0500 SAM-dependent methyltransferases YP_008044563.1 COG1022 Long-chain acyl-CoA synthetases (AMP-forming) YP_008044565.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008044566.1 COG0457 FOG: TPR repeat YP_008044567.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008044568.1 COG0642 Signal transduction histidine kinase YP_008044569.1 COG4067 Uncharacterized protein conserved in archaea YP_008044570.1 COG0516 IMP dehydrogenase/GMP reductase YP_008044571.1 COG4394 Uncharacterized protein conserved in bacteria YP_008044572.1 COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) YP_008044573.1 COG3647 Predicted membrane protein YP_008044575.1 COG1052 Lactate dehydrogenase and related dehydrogenases YP_008044577.1 COG2199 FOG: GGDEF domain YP_008044578.1 COG3560 Predicted oxidoreductase related to nitroreductase YP_008044579.1 COG0637 Predicted phosphatase/phosphohexomutase YP_008044581.1 COG0583 Transcriptional regulator YP_008044582.1 COG2199 FOG: GGDEF domain YP_008044583.1 COG1278 Cold shock proteins YP_008044584.1 COG1335 Amidases related to nicotinamidase YP_008044585.1 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases YP_008044586.1 COG0621 2-methylthioadenine synthetase YP_008044587.1 COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase YP_008044588.1 COG0319 Predicted metal-dependent hydrolase YP_008044589.1 COG4535 Putative Mg2+ and Co2+ transporter CorC YP_008044590.1 COG0815 Apolipoprotein N-acyltransferase YP_008044592.1 COG0495 Leucyl-tRNA synthetase YP_008044593.1 COG2980 Rare lipoprotein B YP_008044594.1 COG1466 DNA polymerase III, delta subunit YP_008044595.1 COG1057 Nicotinic acid mononucleotide adenylyltransferase YP_008044596.1 COG0799 Uncharacterized homolog of plant Iojap protein YP_008044597.1 COG1576 Uncharacterized conserved protein YP_008044598.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_008044599.1 COG0772 Bacterial cell division membrane protein YP_008044600.1 COG0772 Bacterial cell division membrane protein YP_008044601.1 COG2951 Membrane-bound lytic murein transglycosylase B YP_008044602.1 COG0797 Lipoproteins YP_008044603.1 COG1686 D-alanyl-D-alanine carboxypeptidase YP_008044604.1 COG2921 Uncharacterized conserved protein YP_008044605.1 COG0321 Lipoate-protein ligase B YP_008044606.1 COG0320 Lipoate synthase YP_008044607.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_008044608.1 COG3545 Predicted esterase of the alpha/beta hydrolase fold YP_008044609.1 COG2209 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE YP_008044611.1 COG3153 Predicted acetyltransferase YP_008044612.1 COG3153 Predicted acetyltransferase YP_008044613.1 COG0789 Predicted transcriptional regulators YP_008044614.1 COG0608 Single-stranded DNA-specific exonuclease YP_008044615.1 COG1651 Protein-disulfide isomerase YP_008044616.1 COG1970 Large-conductance mechanosensitive channel YP_008044617.1 COG4974 Site-specific recombinase XerD YP_008044618.1 COG0716 Flavodoxins YP_008044619.1 COG0312 Predicted Zn-dependent proteases and their inactivated homologs YP_008044620.1 COG0312 Predicted Zn-dependent proteases and their inactivated homologs YP_008044621.1 COG3324 Predicted enzyme related to lactoylglutathione lyase YP_008044622.1 COG1376 Uncharacterized protein conserved in bacteria YP_008044623.1 COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase YP_008044624.1 COG2175 Probable taurine catabolism dioxygenase YP_008044625.1 COG3207 Pyoverdine/dityrosine biosynthesis protein YP_008044626.1 COG4667 Predicted esterase of the alpha-beta hydrolase superfamily YP_008044628.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_008044630.1 COG0437 Fe-S-cluster-containing hydrogenase components 1 YP_008044631.1 COG0642 Signal transduction histidine kinase YP_008044632.1 COG4566 Response regulator YP_008044633.1 COG3275 Putative regulator of cell autolysis YP_008044634.1 COG3279 Response regulator of the LytR/AlgR family YP_008044635.1 COG1966 Carbon starvation protein, predicted membrane protein YP_008044636.1 COG3340 Peptidase E YP_008044637.1 COG0114 Fumarase YP_008044639.1 COG1553 Uncharacterized conserved protein involved in intracellular sulfur reduction YP_008044640.1 COG2199 FOG: GGDEF domain YP_008044641.1 COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) YP_008044642.1 COG0184 Ribosomal protein S15P/S13E YP_008044643.1 COG0130 Pseudouridine synthase YP_008044644.1 COG0858 Ribosome-binding factor A YP_008044645.1 COG0532 Translation initiation factor 2 (IF-2; GTPase) YP_008044646.1 COG0195 Transcription elongation factor YP_008044647.1 COG0779 Uncharacterized protein conserved in bacteria YP_008044648.1 COG1314 Preprotein translocase subunit SecG YP_008044649.1 COG0149 Triosephosphate isomerase YP_008044650.1 COG1109 Phosphomannomutase YP_008044651.1 COG0294 Dihydropteroate synthase and related enzymes YP_008044652.1 COG0465 ATP-dependent Zn proteases YP_008044653.1 COG0293 23S rRNA methylase YP_008044654.1 COG1534 Predicted RNA-binding protein containing KH domain, possibly ribosomal protein YP_008044656.1 COG0782 Transcription elongation factor YP_008044657.1 COG1360 Flagellar motor protein YP_008044658.1 COG1291 Flagellar motor component YP_008044659.1 COG1722 Exonuclease VII small subunit YP_008044660.1 COG0142 Geranylgeranyl pyrophosphate synthase YP_008044661.1 COG1154 Deoxyxylulose-5-phosphate synthase YP_008044662.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_008044663.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_008044664.1 COG0747 ABC-type dipeptide transport system, periplasmic component YP_008044665.1 COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase YP_008044666.1 COG1267 Phosphatidylglycerophosphatase A and related proteins YP_008044667.1 COG0611 Thiamine monophosphate kinase YP_008044668.1 COG0781 Transcription termination factor YP_008044669.1 COG0054 Riboflavin synthase beta-chain YP_008044670.1 COG5640 Secreted trypsin-like serine protease YP_008044672.1 COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_008044673.1 COG0307 Riboflavin synthase alpha chain YP_008044674.1 COG0117 Pyrimidine deaminase YP_008044675.1 COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains YP_008044677.1 COG0101 Pseudouridylate synthase YP_008044678.1 COG0112 Glycine/serine hydroxymethyltransferase YP_008044680.1 COG3791 Uncharacterized conserved protein YP_008044681.1 COG3381 Uncharacterized component of anaerobic dehydrogenases YP_008044685.1 COG2199 FOG: GGDEF domain YP_008044687.1 COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases YP_008044688.1 COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases YP_008044689.1 COG0757 3-dehydroquinate dehydratase II YP_008044690.1 COG0511 Biotin carboxyl carrier protein YP_008044691.1 COG0439 Biotin carboxylase YP_008044692.1 COG3924 Predicted membrane protein YP_008044693.1 COG4145 Na+/panthothenate symporter YP_008044694.1 COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific YP_008044695.1 COG0583 Transcriptional regulator YP_008044696.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_008044697.1 COG2264 Ribosomal protein L11 methylase YP_008044698.1 COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases YP_008044699.1 COG0110 Acetyltransferase (isoleucine patch superfamily) YP_008044700.1 COG0778 Nitroreductase YP_008044701.1 COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family YP_008044702.1 COG0616 Periplasmic serine proteases (ClpP class) YP_008044703.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_008044705.1 COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase YP_008044706.1 COG3139 Uncharacterized protein conserved in bacteria YP_008044707.1 COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D YP_008044708.1 COG0786 Na+/glutamate symporter YP_008044709.1 COG0840 Methyl-accepting chemotaxis protein YP_008044710.1 COG1186 Protein chain release factor B YP_008044711.1 COG1190 Lysyl-tRNA synthetase (class II) YP_008044712.1 COG0384 Predicted epimerase, PhzC/PhzF homolog YP_008044713.1 COG0369 Sulfite reductase, alpha subunit (flavoprotein) YP_008044714.1 COG0155 Sulfite reductase, beta subunit (hemoprotein) YP_008044715.1 COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes YP_008044716.1 COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components YP_008044717.1 COG4176 ABC-type proline/glycine betaine transport system, permease component YP_008044718.1 COG4175 ABC-type proline/glycine betaine transport system, ATPase component YP_008044719.1 COG0262 Dihydrofolate reductase YP_008044720.1 COG3610 Uncharacterized conserved protein YP_008044721.1 COG2966 Uncharacterized conserved protein YP_008044723.1 COG0521 Molybdopterin biosynthesis enzymes YP_008044725.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_008044726.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008044727.1 COG4706 Predicted 3-hydroxylacyl-(acyl carrier protein) dehydratase YP_008044728.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_008044730.1 COG4258 Predicted exporter YP_008044732.1 COG0824 Predicted thioesterase YP_008044733.1 COG2986 Histidine ammonia-lyase YP_008044734.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_008044735.1 COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases YP_008044736.1 COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases YP_008044737.1 COG4648 Predicted membrane protein YP_008044738.1 COG0236 Acyl carrier protein YP_008044739.1 COG0236 Acyl carrier protein YP_008044740.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_008044743.1 COG0500 SAM-dependent methyltransferases YP_008044745.1 COG1864 DNA/RNA endonuclease G, NUC1 YP_008044746.1 COG1858 Cytochrome c peroxidase YP_008044747.1 COG3338 Carbonic anhydrase YP_008044748.1 COG2313 Uncharacterized enzyme involved in pigment biosynthesis YP_008044749.1 COG2771 DNA-binding HTH domain-containing proteins YP_008044750.1 COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases YP_008044751.1 COG1251 NAD(P)H-nitrite reductase YP_008044752.1 COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component YP_008044753.1 COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component YP_008044754.1 COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components YP_008044755.1 COG3707 Response regulator with putative antiterminator output domain YP_008044756.1 COG0007 Uroporphyrinogen-III methylase YP_008044757.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_008044758.1 COG0219 Predicted rRNA methylase (SpoU class) YP_008044759.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008044760.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins YP_008044762.1 COG0014 Gamma-glutamyl phosphate reductase YP_008044763.1 COG0263 Glutamate 5-kinase YP_008044764.1 COG1653 ABC-type sugar transport system, periplasmic component YP_008044765.1 COG1073 Hydrolases of the alpha/beta superfamily YP_008044766.1 COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins YP_008044767.1 COG2195 Di- and tripeptidases YP_008044769.1 COG4608 ABC-type oligopeptide transport system, ATPase component YP_008044770.1 COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component YP_008044771.1 COG4166 ABC-type oligopeptide transport system, periplasmic component YP_008044772.1 COG4239 ABC-type uncharacterized transport system, permease component YP_008044773.1 COG4174 ABC-type uncharacterized transport system, permease component YP_008044774.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008044776.1 COG0811 Biopolymer transport proteins YP_008044777.1 COG0811 Biopolymer transport proteins YP_008044778.1 COG0848 Biopolymer transport protein YP_008044779.1 COG0810 Periplasmic protein TonB, links inner and outer membranes YP_008044780.1 COG0457 FOG: TPR repeat YP_008044781.1 COG3979 Uncharacterized protein contain chitin-binding domain type 3 YP_008044782.1 COG2374 Predicted extracellular nuclease YP_008044785.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_008044786.1 COG0840 Methyl-accepting chemotaxis protein YP_008044787.1 COG3061 Cell envelope opacity-associated protein A YP_008044788.1 COG1278 Cold shock proteins YP_008044789.1 COG1949 Oligoribonuclease (3'->5' exoribonuclease) YP_008044790.1 COG1162 Predicted GTPases YP_008044791.1 COG0688 Phosphatidylserine decarboxylase YP_008044792.1 COG4628 Uncharacterized conserved protein YP_008044796.1 COG2202 FOG: PAS/PAC domain YP_008044797.1 COG3076 Uncharacterized protein conserved in bacteria YP_008044798.1 COG4412 Uncharacterized protein conserved in bacteria YP_008044800.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_008044801.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_008044803.1 COG1404 Subtilisin-like serine proteases YP_008044804.1 COG2897 Rhodanese-related sulfurtransferase YP_008044805.1 COG2066 Glutaminase YP_008044806.1 COG3171 Uncharacterized protein conserved in bacteria YP_008044807.1 COG0220 Predicted S-adenosylmethionine-dependent methyltransferase YP_008044808.1 COG2234 Predicted aminopeptidases YP_008044809.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs YP_008044810.1 COG4943 Predicted signal transduction protein containing sensor and EAL domains YP_008044811.1 COG1090 Predicted nucleoside-diphosphate sugar epimerase YP_008044812.1 COG3127 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component YP_008044813.1 COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component YP_008044814.1 COG2755 Lysophospholipase L1 and related esterases YP_008044815.1 COG0835 Chemotaxis signal transduction protein YP_008044816.1 COG2931 RTX toxins and related Ca2+-binding proteins YP_008044817.1 COG2985 Predicted permease YP_008044818.1 COG1272 Predicted membrane protein, hemolysin III homolog YP_008044819.1 COG0076 Glutamate decarboxylase and related PLP-dependent proteins YP_008044820.1 COG2917 Intracellular septation protein A YP_008044821.1 COG2350 Uncharacterized protein conserved in bacteria YP_008044822.1 COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase YP_008044823.1 COG1555 DNA uptake protein and related DNA-binding proteins YP_008044824.1 COG1210 UDP-glucose pyrophosphorylase YP_008044825.1 COG3104 Dipeptide/tripeptide permease YP_008044826.1 COG0784 FOG: CheY-like receiver YP_008044828.1 COG1484 DNA replication protein YP_008044829.1 COG0702 Predicted nucleoside-diphosphate-sugar epimerases YP_008044830.1 COG0842 ABC-type multidrug transport system, permease component YP_008044831.1 COG0842 ABC-type multidrug transport system, permease component YP_008044832.1 COG0845 Membrane-fusion protein YP_008044833.1 COG1538 Outer membrane protein YP_008044834.1 COG0042 tRNA-dihydrouridine synthase YP_008044835.1 COG2901 Factor for inversion stimulation Fis, transcriptional activator YP_008044836.1 COG1280 Putative threonine efflux protein YP_008044837.1 COG0316 Uncharacterized conserved protein YP_008044839.1 COG0038 Chloride channel protein EriC YP_008044840.1 COG0001 Glutamate-1-semialdehyde aminotransferase YP_008044842.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_008044843.1 COG0671 Membrane-associated phospholipid phosphatase YP_008044845.1 COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain YP_008044846.1 COG0583 Transcriptional regulator YP_008044847.1 COG2076 Membrane transporters of cations and cationic drugs YP_008044848.1 COG2076 Membrane transporters of cations and cationic drugs YP_008044849.1 COG0346 Lactoylglutathione lyase and related lyases YP_008044850.1 COG0744 Membrane carboxypeptidase (penicillin-binding protein) YP_008044851.1 COG1643 HrpA-like helicases YP_008044852.1 COG1514 2'-5' RNA ligase YP_008044853.1 COG1489 DNA-binding protein, stimulates sugar fermentation YP_008044854.1 COG1734 DnaK suppressor protein YP_008044855.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_008044856.1 COG0617 tRNA nucleotidyltransferase/poly(A) polymerase YP_008044857.1 COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase YP_008044858.1 COG0413 Ketopantoate hydroxymethyltransferase YP_008044859.1 COG0414 Panthothenate synthetase YP_008044860.1 COG0607 Rhodanese-related sulfurtransferase YP_008044863.1 COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) YP_008044864.1 COG1775 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB YP_008044865.1 COG0842 ABC-type multidrug transport system, permease component YP_008044866.1 COG1131 ABC-type multidrug transport system, ATPase component YP_008044867.1 COG0634 Hypoxanthine-guanine phosphoribosyltransferase YP_008044868.1 COG1309 Transcriptional regulator YP_008044869.1 COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase YP_008044870.1 COG0773 UDP-N-acetylmuramate-alanine ligase YP_008044871.1 COG0221 Inorganic pyrophosphatase YP_008044874.1 COG3054 Predicted transcriptional regulator YP_008044877.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_008044878.1 COG0577 ABC-type antimicrobial peptide transport system, permease component YP_008044879.1 COG3495 Uncharacterized protein conserved in bacteria YP_008044881.1 COG2202 FOG: PAS/PAC domain YP_008044884.1 COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain YP_008044885.1 COG0529 Adenylylsulfate kinase and related kinases YP_008044886.1 COG0471 Di- and tricarboxylate transporters YP_008044887.1 COG2895 GTPases - Sulfate adenylate transferase subunit 1 YP_008044888.1 COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes YP_008044889.1 COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) YP_008044890.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_008044891.1 COG1585 Membrane protein implicated in regulation of membrane protease activity YP_008044892.1 COG0517 FOG: CBS domain YP_008044893.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_008044895.1 COG2961 Protein involved in catabolism of external DNA YP_008044896.1 COG0583 Transcriptional regulator YP_008044897.1 COG1182 Acyl carrier protein phosphodiesterase YP_008044899.1 COG3205 Predicted membrane protein YP_008044900.1 COG0346 Lactoylglutathione lyase and related lyases YP_008044902.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_008044903.1 COG0591 Na+/proline symporter YP_008044904.1 COG1376 Uncharacterized protein conserved in bacteria YP_008044905.1 COG0668 Small-conductance mechanosensitive channel YP_008044906.1 COG0282 Acetate kinase YP_008044907.1 COG2731 Beta-galactosidase, beta subunit YP_008044908.1 COG2937 Glycerol-3-phosphate O-acyltransferase YP_008044909.1 COG2132 Putative multicopper oxidases YP_008044910.1 COG1794 Aspartate racemase YP_008044911.1 COG1280 Putative threonine efflux protein YP_008044912.1 COG1280 Putative threonine efflux protein YP_008044913.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs YP_008044917.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008044918.1 COG0733 Na+-dependent transporters of the SNF family YP_008044919.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008044920.1 COG0733 Na+-dependent transporters of the SNF family YP_008044921.1 COG3491 Isopenicillin N synthase and related dioxygenases YP_008044923.1 COG0561 Predicted hydrolases of the HAD superfamily YP_008044924.1 COG0477 Permeases of the major facilitator superfamily YP_008044925.1 COG2345 Predicted transcriptional regulator YP_008044926.1 COG1522 Transcriptional regulators YP_008044927.1 COG3111 Uncharacterized conserved protein YP_008044929.1 COG1846 Transcriptional regulators YP_008044930.1 COG1764 Predicted redox protein, regulator of disulfide bond formation YP_008044931.1 COG2130 Putative NADP-dependent oxidoreductases YP_008044932.1 COG1051 ADP-ribose pyrophosphatase YP_008044933.1 COG2059 Chromate transport protein ChrA YP_008044934.1 COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase YP_008044935.1 COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases YP_008044936.1 COG0296 1,4-alpha-glucan branching enzyme YP_008044937.1 COG1640 4-alpha-glucanotransferase YP_008044938.1 COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase YP_008044939.1 COG0676 Uncharacterized enzymes related to aldose 1-epimerase YP_008044940.1 COG0379 Quinolinate synthase YP_008044941.1 COG0840 Methyl-accepting chemotaxis protein YP_008044942.1 COG1729 Uncharacterized protein conserved in bacteria YP_008044943.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_008044944.1 COG0823 Periplasmic component of the Tol biopolymer transport system YP_008044945.1 COG3064 Membrane protein involved in colicin uptake YP_008044946.1 COG0848 Biopolymer transport protein YP_008044947.1 COG0811 Biopolymer transport proteins YP_008044948.1 COG0824 Predicted thioesterase YP_008044949.1 COG3790 Predicted membrane protein YP_008044950.1 COG4890 Predicted outer membrane lipoprotein YP_008044951.1 COG1294 Cytochrome bd-type quinol oxidase, subunit 2 YP_008044952.1 COG1271 Cytochrome bd-type quinol oxidase, subunit 1 YP_008044953.1 COG2255 Holliday junction resolvasome, helicase subunit YP_008044954.1 COG0632 Holliday junction resolvasome, DNA-binding subunit YP_008044955.1 COG0840 Methyl-accepting chemotaxis protein YP_008044956.1 COG0442 Prolyl-tRNA synthetase YP_008044957.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008044959.1 COG2847 Uncharacterized protein conserved in bacteria YP_008044960.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_008044962.1 COG0110 Acetyltransferase (isoleucine patch superfamily) YP_008044963.1 COG4318 Uncharacterized protein conserved in bacteria YP_008044964.1 COG4166 ABC-type oligopeptide transport system, periplasmic component YP_008044967.1 COG1872 Uncharacterized conserved protein YP_008044968.1 COG0762 Predicted integral membrane protein YP_008044969.1 COG0345 Pyrroline-5-carboxylate reductase YP_008044970.1 COG0325 Predicted enzyme with a TIM-barrel fold YP_008044971.1 COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT YP_008044972.1 COG5008 Tfp pilus assembly protein, ATPase PilU YP_008044973.1 COG3022 Uncharacterized protein conserved in bacteria YP_008044974.1 COG0513 Superfamily II DNA and RNA helicases YP_008044975.1 COG4123 Predicted O-methyltransferase YP_008044976.1 COG1114 Branched-chain amino acid permeases YP_008044977.1 COG1114 Branched-chain amino acid permeases YP_008044979.1 COG1406 Predicted inhibitor of MCP methylation, homolog of CheC YP_008044980.1 COG0735 Fe2+/Zn2+ uptake regulation proteins YP_008044981.1 COG0042 tRNA-dihydrouridine synthase YP_008044984.1 COG0776 Bacterial nucleoid DNA-binding protein YP_008044985.1 COG3160 Regulator of sigma D YP_008044987.1 COG1066 Predicted ATP-dependent serine protease YP_008044989.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_008044990.1 COG0560 Phosphoserine phosphatase YP_008044991.1 COG3726 Uncharacterized membrane protein affecting hemolysin expression YP_008044992.1 COG2203 FOG: GAF domain YP_008044993.1 COG0813 Purine-nucleoside phosphorylase YP_008044994.1 COG1015 Phosphopentomutase YP_008044995.1 COG0213 Thymidine phosphorylase YP_008044996.1 COG0274 Deoxyribose-phosphate aldolase YP_008044997.1 COG4317 Uncharacterized protein conserved in bacteria YP_008044998.1 COG1972 Nucleoside permease YP_008044999.1 COG0084 Mg-dependent DNase YP_008045002.1 COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase YP_008045003.1 COG0004 Ammonia permease YP_008045004.1 COG0582 Integrase YP_008045006.1 COG2932 Predicted transcriptional regulator YP_008045010.1 COG2944 Predicted transcriptional regulator YP_008045014.1 COG0827 Adenine-specific DNA methylase YP_008045023.1 COG5518 Bacteriophage capsid portal protein YP_008045026.1 COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) YP_008045032.1 COG0583 Transcriptional regulator YP_008045033.1 COG1734 DnaK suppressor protein YP_008045035.1 COG4678 Muramidase (phage lambda lysozyme) YP_008045039.1 COG5283 Phage-related tail protein YP_008045042.1 COG4385 Bacteriophage P2-related tail formation protein YP_008045047.1 COG1714 Predicted membrane protein/domain YP_008045048.1 COG0795 Predicted permeases YP_008045049.1 COG0795 Predicted permeases YP_008045050.1 COG0260 Leucyl aminopeptidase YP_008045051.1 COG2927 DNA polymerase III, chi subunit YP_008045052.1 COG0525 Valyl-tRNA synthetase YP_008045053.1 COG1253 Hemolysins and related proteins containing CBS domains YP_008045054.1 COG0586 Uncharacterized membrane-associated protein YP_008045055.1 COG1686 D-alanyl-D-alanine carboxypeptidase YP_008045056.1 COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing) YP_008045057.1 COG0527 Aspartokinases YP_008045058.1 COG0013 Alanyl-tRNA synthetase YP_008045059.1 COG2137 Uncharacterized protein conserved in bacteria YP_008045060.1 COG0468 RecA/RadA recombinase YP_008045061.1 COG1546 Uncharacterized protein (competence- and mitomycin-induced) YP_008045062.1 COG2333 Predicted hydrolase (metallo-beta-lactamase superfamily) YP_008045064.1 COG3311 Predicted transcriptional regulator YP_008045065.1 COG0582 Integrase YP_008045066.1 COG0249 Mismatch repair ATPase (MutS family) YP_008045067.1 COG1292 Choline-glycine betaine transporter YP_008045068.1 COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase YP_008045069.1 COG1846 Transcriptional regulators YP_008045070.1 COG3068 Uncharacterized protein conserved in bacteria YP_008045071.1 COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases YP_008045072.1 COG0739 Membrane proteins related to metalloendopeptidases YP_008045073.1 COG0642 Signal transduction histidine kinase YP_008045074.1 COG2358 TRAP-type uncharacterized transport system, periplasmic component YP_008045075.1 COG3672 Predicted periplasmic protein YP_008045076.1 COG4531 ABC-type Zn2+ transport system, periplasmic component/surface adhesin YP_008045077.1 COG1121 ABC-type Mn/Zn transport systems, ATPase component YP_008045078.1 COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components YP_008045079.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_008045080.1 COG1573 Uracil-DNA glycosylase YP_008045081.1 COG2962 Predicted permeases YP_008045082.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008045083.1 COG2827 Predicted endonuclease containing a URI domain YP_008045084.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_008045086.1 COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription YP_008045087.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_008045089.1 COG4233 Uncharacterized protein predicted to be involved in C-type cytochrome biogenesis YP_008045090.1 COG1651 Protein-disulfide isomerase YP_008045091.1 COG1651 Protein-disulfide isomerase YP_008045092.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_008045093.1 COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain YP_008045099.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_008045100.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_008045101.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_008045102.1 COG1289 Predicted membrane protein YP_008045103.1 COG1566 Multidrug resistance efflux pump YP_008045105.1 COG3791 Uncharacterized conserved protein YP_008045106.1 COG1051 ADP-ribose pyrophosphatase YP_008045107.1 COG3150 Predicted esterase YP_008045108.1 COG1409 Predicted phosphohydrolases YP_008045109.1 COG3151 Uncharacterized protein conserved in bacteria YP_008045110.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_008045111.1 COG1538 Outer membrane protein YP_008045112.1 COG2870 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase YP_008045113.1 COG1560 Lauroyl/myristoyl acyltransferase YP_008045114.1 COG0810 Periplasmic protein TonB, links inner and outer membranes YP_008045115.1 COG3025 Uncharacterized conserved protein YP_008045117.1 COG1392 Phosphate transport regulator (distant homolog of PhoU) YP_008045118.1 COG0306 Phosphate/sulphate permeases YP_008045119.1 COG2606 Uncharacterized conserved protein YP_008045120.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_008045121.1 COG0607 Rhodanese-related sulfurtransferase YP_008045122.1 COG1764 Predicted redox protein, regulator of disulfide bond formation YP_008045123.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs YP_008045124.1 COG0583 Transcriptional regulator YP_008045125.1 COG1380 Putative effector of murein hydrolase LrgA YP_008045126.1 COG1346 Putative effector of murein hydrolase YP_008045129.1 COG0617 tRNA nucleotidyltransferase/poly(A) polymerase YP_008045131.1 COG3267 Type II secretory pathway, component ExeA (predicted ATPase) YP_008045133.1 COG1194 A/G-specific DNA glycosylase YP_008045134.1 COG2924 Fe-S cluster protector protein YP_008045135.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_008045136.1 COG3111 Uncharacterized conserved protein YP_008045137.1 COG3240 Phospholipase/lecithinase/hemolysin YP_008045138.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008045139.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_008045140.1 COG3009 Uncharacterized protein conserved in bacteria YP_008045141.1 COG3008 Paraquat-inducible protein B YP_008045142.1 COG2995 Uncharacterized paraquat-inducible protein A YP_008045143.1 COG1923 Uncharacterized host factor I protein YP_008045144.1 COG0637 Predicted phosphatase/phosphohexomutase YP_008045145.1 COG3434 Predicted signal transduction protein containing EAL and modified HD-GYP domains YP_008045146.1 COG2199 FOG: GGDEF domain YP_008045147.1 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase YP_008045148.1 COG2813 16S RNA G1207 methylase RsmC YP_008045149.1 COG0448 ADP-glucose pyrophosphorylase YP_008045150.1 COG0297 Glycogen synthase YP_008045153.1 COG1757 Na+/H+ antiporter YP_008045154.1 COG0583 Transcriptional regulator YP_008045155.1 COG0687 Spermidine/putrescine-binding periplasmic protein YP_008045156.1 COG3842 ABC-type spermidine/putrescine transport systems, ATPase components YP_008045158.1 COG1177 ABC-type spermidine/putrescine transport system, permease component II YP_008045159.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_008045161.1 COG5006 Predicted permease, DMT superfamily YP_008045162.1 COG1522 Transcriptional regulators YP_008045163.1 COG0110 Acetyltransferase (isoleucine patch superfamily) YP_008045164.1 COG0366 Glycosidases YP_008045165.1 COG1264 Phosphotransferase system IIB components YP_008045166.1 COG1609 Transcriptional regulators YP_008045167.1 COG0679 Predicted permeases YP_008045168.1 COG2217 Cation transport ATPase YP_008045169.1 COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D YP_008045170.1 COG0530 Ca2+/Na+ antiporter YP_008045172.1 COG1803 Methylglyoxal synthase YP_008045173.1 COG4805 Uncharacterized protein conserved in bacteria YP_008045174.1 COG2193 Bacterioferritin (cytochrome b1) YP_008045175.1 COG2906 Bacterioferritin-associated ferredoxin YP_008045176.1 COG5453 Uncharacterized conserved protein YP_008045177.1 COG1444 Predicted P-loop ATPase fused to an acetyltransferase YP_008045178.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008045179.1 COG0835 Chemotaxis signal transduction protein YP_008045180.1 COG3314 Uncharacterized protein conserved in bacteria YP_008045181.1 COG4283 Uncharacterized conserved protein YP_008045183.1 COG1226 Kef-type K+ transport systems, predicted NAD-binding component YP_008045184.1 COG0344 Predicted membrane protein YP_008045185.1 COG1539 Dihydroneopterin aldolase YP_008045186.1 COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase YP_008045187.1 COG2606 Uncharacterized conserved protein YP_008045188.1 COG0477 Permeases of the major facilitator superfamily YP_008045189.1 COG0523 Putative GTPases (G3E family) YP_008045190.1 COG1280 Putative threonine efflux protein YP_008045191.1 COG0583 Transcriptional regulator YP_008045192.1 COG1049 Aconitase B YP_008045193.1 COG1752 Predicted esterase of the alpha-beta hydrolase superfamily YP_008045194.1 COG0840 Methyl-accepting chemotaxis protein YP_008045195.1 COG0840 Methyl-accepting chemotaxis protein YP_008045197.1 COG2203 FOG: GAF domain YP_008045198.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_008045199.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_008045200.1 COG2609 Pyruvate dehydrogenase complex, dehydrogenase (E1) component YP_008045201.1 COG2186 Transcriptional regulators YP_008045202.1 COG3023 Negative regulator of beta-lactamase expression YP_008045203.1 COG3577 Predicted aspartyl protease YP_008045204.1 COG0157 Nicotinate-nucleotide pyrophosphorylase YP_008045206.1 COG4969 Tfp pilus assembly protein, major pilin PilA YP_008045207.1 COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB YP_008045208.1 COG1459 Type II secretory pathway, component PulF YP_008045209.1 COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases YP_008045210.1 COG0237 Dephospho-CoA kinase YP_008045211.1 COG4582 Uncharacterized protein conserved in bacteria YP_008045212.1 COG3024 Uncharacterized protein conserved in bacteria YP_008045213.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_008045214.1 COG0457 FOG: TPR repeat YP_008045215.1 COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) YP_008045216.1 COG0739 Membrane proteins related to metalloendopeptidases YP_008045217.1 COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase YP_008045218.1 COG0206 Cell division GTPase YP_008045219.1 COG0849 Actin-like ATPase involved in cell division YP_008045220.1 COG1589 Cell division septal protein YP_008045221.1 COG0773 UDP-N-acetylmuramate-alanine ligase YP_008045222.1 COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase YP_008045223.1 COG0772 Bacterial cell division membrane protein YP_008045224.1 COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase YP_008045225.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase YP_008045226.1 COG0770 UDP-N-acetylmuramyl pentapeptide synthase YP_008045227.1 COG0769 UDP-N-acetylmuramyl tripeptide synthase YP_008045228.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_008045229.1 COG3116 Cell division protein YP_008045230.1 COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis YP_008045231.1 COG2001 Uncharacterized protein conserved in bacteria YP_008045232.1 COG0313 Predicted methyltransferases YP_008045233.1 COG3107 Putative lipoprotein YP_008045234.1 COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase YP_008045235.1 COG0279 Phosphoheptose isomerase YP_008045236.1 COG2823 Predicted periplasmic or secreted lipoprotein YP_008045237.1 COG2969 Stringent starvation protein B YP_008045238.1 COG0625 Glutathione S-transferase YP_008045239.1 COG2857 Cytochrome c1 YP_008045240.1 COG1290 Cytochrome b subunit of the bc complex YP_008045241.1 COG0723 Rieske Fe-S protein YP_008045242.1 COG0103 Ribosomal protein S9 YP_008045243.1 COG0102 Ribosomal protein L13 YP_008045244.1 COG1485 Predicted ATPase YP_008045245.1 COG3105 Uncharacterized protein conserved in bacteria YP_008045246.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_008045247.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_008045253.1 COG3964 Predicted amidohydrolase YP_008045254.1 COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase] YP_008045255.1 COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase YP_008045256.1 COG3711 Transcriptional antiterminator YP_008045257.1 COG1925 Phosphotransferase system, HPr-related proteins YP_008045258.1 COG1660 Predicted P-loop-containing kinase YP_008045259.1 COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) YP_008045260.1 COG1544 Ribosome-associated protein Y (PSrp-1) YP_008045261.1 COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog YP_008045262.1 COG1137 ABC-type (unclassified) transport system, ATPase component YP_008045263.1 COG1934 Uncharacterized protein conserved in bacteria YP_008045264.1 COG3117 Uncharacterized protein conserved in bacteria YP_008045265.1 COG1778 Low specificity phosphatase (HAD superfamily) YP_008045266.1 COG0794 Predicted sugar phosphate isomerase involved in capsule formation YP_008045267.1 COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component YP_008045268.1 COG0767 ABC-type transport system involved in resistance to organic solvents, permease component YP_008045269.1 COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component YP_008045270.1 COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component YP_008045272.1 COG5007 Predicted transcriptional regulator, BolA superfamily YP_008045273.1 COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase YP_008045274.1 COG0312 Predicted Zn-dependent proteases and their inactivated homologs YP_008045275.1 COG3028 Uncharacterized protein conserved in bacteria YP_008045276.1 COG0744 Membrane carboxypeptidase (penicillin-binding protein) YP_008045277.1 COG2926 Uncharacterized protein conserved in bacteria YP_008045278.1 COG3213 Uncharacterized protein involved in response to NO YP_008045279.1 COG1396 Predicted transcriptional regulators YP_008045280.1 COG3135 Uncharacterized protein involved in benzoate metabolism YP_008045282.1 COG0685 5,10-methylenetetrahydrofolate reductase YP_008045284.1 COG1653 ABC-type sugar transport system, periplasmic component YP_008045285.1 COG0840 Methyl-accepting chemotaxis protein YP_008045286.1 COG3047 Outer membrane protein W YP_008045287.1 COG0178 Excinuclease ATPase subunit YP_008045288.1 COG2771 DNA-binding HTH domain-containing proteins YP_008045289.1 COG0629 Single-stranded DNA-binding protein YP_008045290.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008045292.1 COG0053 Predicted Co/Zn/Cd cation transporters YP_008045294.1 COG1278 Cold shock proteins YP_008045295.1 COG4771 Outer membrane receptor for ferrienterochelin and colicins YP_008045296.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008045297.1 COG0642 Signal transduction histidine kinase YP_008045298.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008045302.1 COG2202 FOG: PAS/PAC domain YP_008045303.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_008045304.1 COG0346 Lactoylglutathione lyase and related lyases YP_008045305.1 COG1106 Predicted ATPases YP_008045306.1 COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member YP_008045307.1 COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) YP_008045308.1 COG1330 Exonuclease V gamma subunit YP_008045309.1 COG2259 Predicted membrane protein YP_008045310.1 COG1741 Pirin-related protein YP_008045312.1 COG0583 Transcriptional regulator YP_008045313.1 COG1396 Predicted transcriptional regulators YP_008045314.1 COG2188 Transcriptional regulators YP_008045315.1 COG1840 ABC-type Fe3+ transport system, periplasmic component YP_008045316.1 COG1524 Uncharacterized proteins of the AP superfamily YP_008045317.1 COG4132 ABC-type uncharacterized transport system, permease component YP_008045318.1 COG1177 ABC-type spermidine/putrescine transport system, permease component II YP_008045319.1 COG3842 ABC-type spermidine/putrescine transport systems, ATPase components YP_008045320.1 COG0560 Phosphoserine phosphatase YP_008045321.1 COG0840 Methyl-accepting chemotaxis protein YP_008045322.1 COG3556 Predicted membrane protein YP_008045323.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_008045324.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_008045325.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_008045326.1 COG0753 Catalase YP_008045329.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008045331.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_008045332.1 COG0628 Predicted permease YP_008045333.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008045334.1 COG2957 Peptidylarginine deiminase and related enzymes YP_008045335.1 COG0583 Transcriptional regulator YP_008045336.1 COG3284 Transcriptional activator of acetoin/glycerol metabolism YP_008045337.1 COG0371 Glycerol dehydrogenase and related enzymes YP_008045338.1 COG3412 Uncharacterized protein conserved in bacteria YP_008045339.1 COG2376 Dihydroxyacetone kinase YP_008045340.1 COG2376 Dihydroxyacetone kinase YP_008045341.1 COG2252 Permeases YP_008045343.1 COG0241 Histidinol phosphatase and related phosphatases YP_008045344.1 COG0050 GTPases - translation elongation factors YP_008045345.1 COG0480 Translation elongation factors (GTPases) YP_008045346.1 COG0049 Ribosomal protein S7 YP_008045347.1 COG0048 Ribosomal protein S12 YP_008045348.1 COG2168 Uncharacterized conserved protein involved in oxidation of intracellular sulfur YP_008045349.1 COG2923 Uncharacterized protein involved in the oxidation of intracellular sulfur YP_008045350.1 COG1553 Uncharacterized conserved protein involved in intracellular sulfur reduction YP_008045351.1 COG0251 Putative translation initiation inhibitor, yjgF family YP_008045352.1 COG2964 Uncharacterized protein conserved in bacteria YP_008045353.1 COG3676 Transposase and inactivated derivatives YP_008045354.1 COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit YP_008045355.1 COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit YP_008045356.1 COG0222 Ribosomal protein L7/L12 YP_008045357.1 COG0244 Ribosomal protein L10 YP_008045358.1 COG0081 Ribosomal protein L1 YP_008045359.1 COG0080 Ribosomal protein L11 YP_008045360.1 COG0250 Transcription antiterminator YP_008045361.1 COG0690 Preprotein translocase subunit SecE YP_008045362.1 COG0050 GTPases - translation elongation factors YP_008045363.1 COG1072 Panthothenate kinase YP_008045364.1 COG1654 Biotin operon repressor YP_008045365.1 COG0812 UDP-N-acetylmuramate dehydrogenase YP_008045366.1 COG0569 K+ transport systems, NAD-binding component YP_008045367.1 COG0168 Trk-type K+ transport systems, membrane components YP_008045368.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_008045369.1 COG2128 Uncharacterized conserved protein YP_008045370.1 COG3059 Predicted membrane protein YP_008045371.1 COG0550 Topoisomerase IA YP_008045372.1 COG3005 Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit YP_008045373.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_008045375.1 COG0642 Signal transduction histidine kinase YP_008045376.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008045379.1 COG2717 Predicted membrane protein YP_008045380.1 COG2041 Sulfite oxidase and related enzymes YP_008045382.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_008045384.1 COG0642 Signal transduction histidine kinase YP_008045385.1 COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase YP_008045386.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_008045387.1 COG0517 FOG: CBS domain YP_008045389.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008045390.1 COG1522 Transcriptional regulators YP_008045391.1 COG2502 Asparagine synthetase A YP_008045392.1 COG1237 Metal-dependent hydrolases of the beta-lactamase superfamily II YP_008045393.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_008045394.1 COG1496 Uncharacterized conserved protein YP_008045395.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_008045396.1 COG4105 DNA uptake lipoprotein YP_008045397.1 COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases YP_008045398.1 COG1823 Predicted Na+/dicarboxylate symporter YP_008045399.1 COG3681 Uncharacterized conserved protein YP_008045400.1 COG2964 Uncharacterized protein conserved in bacteria YP_008045401.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_008045402.1 COG1282 NAD/NADP transhydrogenase beta subunit YP_008045403.1 COG3288 NAD/NADP transhydrogenase alpha subunit YP_008045404.1 COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family YP_008045405.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_008045406.1 COG3040 Bacterial lipocalin YP_008045407.1 COG0840 Methyl-accepting chemotaxis protein YP_008045408.1 COG0688 Phosphatidylserine decarboxylase YP_008045410.1 COG0540 Aspartate carbamoyltransferase, catalytic chain YP_008045411.1 COG1781 Aspartate carbamoyltransferase, regulatory subunit YP_008045412.1 COG1438 Arginine repressor YP_008045413.1 COG1288 Predicted membrane protein YP_008045414.1 COG0078 Ornithine carbamoyltransferase YP_008045415.1 COG0549 Carbamate kinase YP_008045416.1 COG2235 Arginine deiminase YP_008045418.1 COG1192 ATPases involved in chromosome partitioning YP_008045420.1 COG0840 Methyl-accepting chemotaxis protein YP_008045421.1 COG4211 ABC-type glucose/galactose transport system, permease component YP_008045422.1 COG1129 ABC-type sugar transport system, ATPase component YP_008045423.1 COG1879 ABC-type sugar transport system, periplasmic component YP_008045424.1 COG3250 Beta-galactosidase/beta-glucuronidase YP_008045425.1 COG1609 Transcriptional regulators YP_008045426.1 COG1087 UDP-glucose 4-epimerase YP_008045427.1 COG1085 Galactose-1-phosphate uridylyltransferase YP_008045428.1 COG0153 Galactokinase YP_008045429.1 COG2017 Galactose mutarotase and related enzymes YP_008045430.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) YP_008045431.1 COG1968 Uncharacterized bacitracin resistance protein YP_008045432.1 COG3806 Anti-sigma factor YP_008045433.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_008045434.1 COG2802 Uncharacterized protein, similar to the N-terminal domain of Lon protease YP_008045435.1 COG0018 Arginyl-tRNA synthetase YP_008045436.1 COG3087 Cell division protein YP_008045437.1 COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit YP_008045438.1 COG1220 ATP-dependent protease HslVU (ClpYQ), ATPase subunit YP_008045439.1 COG0477 Permeases of the major facilitator superfamily YP_008045440.1 COG0583 Transcriptional regulator YP_008045441.1 COG1251 NAD(P)H-nitrite reductase YP_008045443.1 COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases YP_008045444.1 COG2116 Formate/nitrite family of transporters YP_008045445.1 COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) YP_008045446.1 COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) YP_008045447.1 COG0840 Methyl-accepting chemotaxis protein YP_008045448.1 COG0684 Demethylmenaquinone methyltransferase YP_008045449.1 COG1738 Uncharacterized conserved protein YP_008045451.1 COG0397 Uncharacterized conserved protein YP_008045452.1 COG2863 Cytochrome c553 YP_008045453.1 COG0514 Superfamily II DNA helicase YP_008045454.1 COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism YP_008045456.1 COG2258 Uncharacterized protein conserved in bacteria YP_008045457.1 COG1177 ABC-type spermidine/putrescine transport system, permease component II YP_008045458.1 COG1176 ABC-type spermidine/putrescine transport system, permease component I YP_008045459.1 COG3842 ABC-type spermidine/putrescine transport systems, ATPase components YP_008045460.1 COG0687 Spermidine/putrescine-binding periplasmic protein YP_008045461.1 COG0687 Spermidine/putrescine-binding periplasmic protein YP_008045462.1 COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_008045463.1 COG0174 Glutamine synthetase YP_008045464.1 COG1734 DnaK suppressor protein YP_008045465.1 COG2216 High-affinity K+ transport system, ATPase chain B YP_008045466.1 COG4539 Predicted membrane protein YP_008045467.1 COG3045 Uncharacterized protein conserved in bacteria YP_008045468.1 COG1052 Lactate dehydrogenase and related dehydrogenases YP_008045469.1 COG0443 Molecular chaperone YP_008045470.1 COG3187 Heat shock protein YP_008045471.1 COG1639 Predicted signal transduction protein YP_008045472.1 COG0366 Glycosidases YP_008045473.1 COG2096 Uncharacterized conserved protein YP_008045475.1 COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase YP_008045476.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008045477.1 COG0642 Signal transduction histidine kinase YP_008045479.1 COG0281 Malic enzyme YP_008045480.1 COG0702 Predicted nucleoside-diphosphate-sugar epimerases YP_008045481.1 COG0254 Ribosomal protein L31 YP_008045482.1 COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase YP_008045483.1 COG2931 RTX toxins and related Ca2+-binding proteins YP_008045484.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_008045485.1 COG1171 Threonine dehydratase YP_008045486.1 COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase YP_008045487.1 COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase YP_008045488.1 COG3978 Acetolactate synthase (isozyme II), small (regulatory) subunit YP_008045489.1 COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] YP_008045490.1 COG0606 Predicted ATPase with chaperone activity YP_008045491.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_008045492.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_008045493.1 COG1683 Uncharacterized conserved protein YP_008045494.1 COG1051 ADP-ribose pyrophosphatase YP_008045495.1 COG1335 Amidases related to nicotinamidase YP_008045496.1 COG1488 Nicotinic acid phosphoribosyltransferase YP_008045497.1 COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component YP_008045498.1 COG3638 ABC-type phosphate/phosphonate transport system, ATPase component YP_008045499.1 COG3639 ABC-type phosphate/phosphonate transport system, permease component YP_008045500.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_008045501.1 COG2334 Putative homoserine kinase type II (protein kinase fold) YP_008045502.1 COG0348 Polyferredoxin YP_008045503.1 COG3084 Uncharacterized protein conserved in bacteria YP_008045504.1 COG2199 FOG: GGDEF domain YP_008045505.1 COG0789 Predicted transcriptional regulators YP_008045506.1 COG2217 Cation transport ATPase YP_008045507.1 COG0461 Orotate phosphoribosyltransferase YP_008045508.1 COG0689 RNase PH YP_008045509.1 COG1561 Uncharacterized stress-induced protein YP_008045510.1 COG0859 ADP-heptose:LPS heptosyltransferase YP_008045511.1 COG0859 ADP-heptose:LPS heptosyltransferase YP_008045512.1 COG0859 ADP-heptose:LPS heptosyltransferase YP_008045513.1 COG3306 Glycosyltransferase involved in LPS biosynthesis YP_008045514.1 COG3307 Lipid A core - O-antigen ligase and related enzymes YP_008045515.1 COG0438 Glycosyltransferase YP_008045516.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_008045517.1 COG1309 Transcriptional regulator YP_008045518.1 COG0156 7-keto-8-aminopelargonate synthetase and related enzymes YP_008045519.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases YP_008045520.1 COG3245 Cytochrome c5 YP_008045521.1 COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain YP_008045522.1 COG0210 Superfamily I DNA and RNA helicases YP_008045523.1 COG0520 Selenocysteine lyase YP_008045524.1 COG2166 SufE protein probably involved in Fe-S center assembly YP_008045525.1 COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 YP_008045526.1 COG0457 FOG: TPR repeat YP_008045527.1 COG0810 Periplasmic protein TonB, links inner and outer membranes YP_008045528.1 COG0848 Biopolymer transport protein YP_008045529.1 COG0811 Biopolymer transport proteins YP_008045530.1 COG0811 Biopolymer transport proteins YP_008045532.1 COG2771 DNA-binding HTH domain-containing proteins YP_008045533.1 COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains YP_008045534.1 COG1349 Transcriptional regulators of sugar metabolism YP_008045535.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_008045536.1 COG0642 Signal transduction histidine kinase YP_008045537.1 COG2602 Beta-lactamase class D YP_008045538.1 COG4452 Inner membrane protein involved in colicin E2 resistance YP_008045539.1 COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) YP_008045540.1 COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) YP_008045541.1 COG0055 F0F1-type ATP synthase, beta subunit YP_008045542.1 COG0224 F0F1-type ATP synthase, gamma subunit YP_008045543.1 COG0056 F0F1-type ATP synthase, alpha subunit YP_008045544.1 COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) YP_008045545.1 COG0711 F0F1-type ATP synthase, subunit b YP_008045546.1 COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K YP_008045547.1 COG0356 F0F1-type ATP synthase, subunit a YP_008045548.1 COG3312 F0F1-type ATP synthase, subunit I YP_008045549.1 COG1475 Predicted transcriptional regulators YP_008045550.1 COG1192 ATPases involved in chromosome partitioning YP_008045551.1 COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division YP_008045552.1 COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division YP_008045553.1 COG0716 Flavodoxins YP_008045554.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_008045555.1 COG4615 ABC-type siderophore export system, fused ATPase and permease components YP_008045556.1 COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components YP_008045557.1 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component YP_008045558.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component YP_008045559.1 COG0486 Predicted GTPase YP_008045560.1 COG0706 Preprotein translocase subunit YidC YP_008045561.1 COG0759 Uncharacterized conserved protein YP_008045562.1 COG0594 RNase P protein component YP_008045564.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_008045565.1 COG0765 ABC-type amino acid transport system, permease component YP_008045566.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain