-- dump date 20250216_233119 -- class Genbank::Contig -- table contig_comment -- id comment NZ_CP115841.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP115841.1.REFSEQ INFORMATION: The reference sequence is identical to CP115841.1. Bacteria and source DNA available from Jeffrey H Chang.REFSEQ INFORMATION: The reference sequence is identical to CP115841.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP115841.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP115841.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP115841.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP115841.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9bREFSEQ INFORMATION: The reference sequence is identical to CP115841.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: FullREFSEQ INFORMATION: The reference sequence is identical to CP115841.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: YesREFSEQ INFORMATION: The reference sequence is identical to CP115841.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4xREFSEQ INFORMATION: The reference sequence is identical to CP115841.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinIONREFSEQ INFORMATION: The reference sequence is identical to CP115841.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP115841.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP115841.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP115841.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09REFSEQ INFORMATION: The reference sequence is identical to CP115841.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11REFSEQ INFORMATION: The reference sequence is identical to CP115841.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP115841.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP115841.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP115841.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP115841.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9REFSEQ INFORMATION: The reference sequence is identical to CP115841.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP115841.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638REFSEQ INFORMATION: The reference sequence is identical to CP115841.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563REFSEQ INFORMATION: The reference sequence is identical to CP115841.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477REFSEQ INFORMATION: The reference sequence is identical to CP115841.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477REFSEQ INFORMATION: The reference sequence is identical to CP115841.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75REFSEQ INFORMATION: The reference sequence is identical to CP115841.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP115841.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP115841.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56REFSEQ INFORMATION: The reference sequence is identical to CP115841.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to CP115841.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86REFSEQ INFORMATION: The reference sequence is identical to CP115841.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86 CDSs (without protein) :: 86REFSEQ INFORMATION: The reference sequence is identical to CP115841.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86 CDSs (without protein) :: 86 Pseudo Genes (ambiguous residues) :: 0 of 86REFSEQ INFORMATION: The reference sequence is identical to CP115841.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86 CDSs (without protein) :: 86 Pseudo Genes (ambiguous residues) :: 0 of 86 Pseudo Genes (frameshifted) :: 44 of 86REFSEQ INFORMATION: The reference sequence is identical to CP115841.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86 CDSs (without protein) :: 86 Pseudo Genes (ambiguous residues) :: 0 of 86 Pseudo Genes (frameshifted) :: 44 of 86 Pseudo Genes (incomplete) :: 57 of 86REFSEQ INFORMATION: The reference sequence is identical to CP115841.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86 CDSs (without protein) :: 86 Pseudo Genes (ambiguous residues) :: 0 of 86 Pseudo Genes (frameshifted) :: 44 of 86 Pseudo Genes (incomplete) :: 57 of 86 Pseudo Genes (internal stop) :: 13 of 86REFSEQ INFORMATION: The reference sequence is identical to CP115841.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86 CDSs (without protein) :: 86 Pseudo Genes (ambiguous residues) :: 0 of 86 Pseudo Genes (frameshifted) :: 44 of 86 Pseudo Genes (incomplete) :: 57 of 86 Pseudo Genes (internal stop) :: 13 of 86 Pseudo Genes (multiple problems) :: 26 of 86REFSEQ INFORMATION: The reference sequence is identical to CP115841.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86 CDSs (without protein) :: 86 Pseudo Genes (ambiguous residues) :: 0 of 86 Pseudo Genes (frameshifted) :: 44 of 86 Pseudo Genes (incomplete) :: 57 of 86 Pseudo Genes (internal stop) :: 13 of 86 Pseudo Genes (multiple problems) :: 26 of 86 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP115841.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86 CDSs (without protein) :: 86 Pseudo Genes (ambiguous residues) :: 0 of 86 Pseudo Genes (frameshifted) :: 44 of 86 Pseudo Genes (incomplete) :: 57 of 86 Pseudo Genes (internal stop) :: 13 of 86 Pseudo Genes (multiple problems) :: 26 of 86 ##Genome-Annotation-Data-END## COMPLETENESS: full length. NZ_CP115842.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP115842.1.REFSEQ INFORMATION: The reference sequence is identical to CP115842.1. Bacteria and source DNA available from Jeffrey H Chang.REFSEQ INFORMATION: The reference sequence is identical to CP115842.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP115842.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP115842.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP115842.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP115842.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9bREFSEQ INFORMATION: The reference sequence is identical to CP115842.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: FullREFSEQ INFORMATION: The reference sequence is identical to CP115842.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: YesREFSEQ INFORMATION: The reference sequence is identical to CP115842.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4xREFSEQ INFORMATION: The reference sequence is identical to CP115842.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinIONREFSEQ INFORMATION: The reference sequence is identical to CP115842.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP115842.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP115842.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP115842.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09REFSEQ INFORMATION: The reference sequence is identical to CP115842.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11REFSEQ INFORMATION: The reference sequence is identical to CP115842.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP115842.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP115842.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP115842.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP115842.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9REFSEQ INFORMATION: The reference sequence is identical to CP115842.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP115842.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638REFSEQ INFORMATION: The reference sequence is identical to CP115842.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563REFSEQ INFORMATION: The reference sequence is identical to CP115842.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477REFSEQ INFORMATION: The reference sequence is identical to CP115842.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477REFSEQ INFORMATION: The reference sequence is identical to CP115842.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75REFSEQ INFORMATION: The reference sequence is identical to CP115842.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP115842.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP115842.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56REFSEQ INFORMATION: The reference sequence is identical to CP115842.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to CP115842.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86REFSEQ INFORMATION: The reference sequence is identical to CP115842.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86 CDSs (without protein) :: 86REFSEQ INFORMATION: The reference sequence is identical to CP115842.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86 CDSs (without protein) :: 86 Pseudo Genes (ambiguous residues) :: 0 of 86REFSEQ INFORMATION: The reference sequence is identical to CP115842.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86 CDSs (without protein) :: 86 Pseudo Genes (ambiguous residues) :: 0 of 86 Pseudo Genes (frameshifted) :: 44 of 86REFSEQ INFORMATION: The reference sequence is identical to CP115842.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86 CDSs (without protein) :: 86 Pseudo Genes (ambiguous residues) :: 0 of 86 Pseudo Genes (frameshifted) :: 44 of 86 Pseudo Genes (incomplete) :: 57 of 86REFSEQ INFORMATION: The reference sequence is identical to CP115842.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86 CDSs (without protein) :: 86 Pseudo Genes (ambiguous residues) :: 0 of 86 Pseudo Genes (frameshifted) :: 44 of 86 Pseudo Genes (incomplete) :: 57 of 86 Pseudo Genes (internal stop) :: 13 of 86REFSEQ INFORMATION: The reference sequence is identical to CP115842.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86 CDSs (without protein) :: 86 Pseudo Genes (ambiguous residues) :: 0 of 86 Pseudo Genes (frameshifted) :: 44 of 86 Pseudo Genes (incomplete) :: 57 of 86 Pseudo Genes (internal stop) :: 13 of 86 Pseudo Genes (multiple problems) :: 26 of 86REFSEQ INFORMATION: The reference sequence is identical to CP115842.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86 CDSs (without protein) :: 86 Pseudo Genes (ambiguous residues) :: 0 of 86 Pseudo Genes (frameshifted) :: 44 of 86 Pseudo Genes (incomplete) :: 57 of 86 Pseudo Genes (internal stop) :: 13 of 86 Pseudo Genes (multiple problems) :: 26 of 86 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP115842.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86 CDSs (without protein) :: 86 Pseudo Genes (ambiguous residues) :: 0 of 86 Pseudo Genes (frameshifted) :: 44 of 86 Pseudo Genes (incomplete) :: 57 of 86 Pseudo Genes (internal stop) :: 13 of 86 Pseudo Genes (multiple problems) :: 26 of 86 ##Genome-Annotation-Data-END## COMPLETENESS: full length. NZ_CP115843.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP115843.1.REFSEQ INFORMATION: The reference sequence is identical to CP115843.1. Bacteria and source DNA available from Jeffrey H Chang.REFSEQ INFORMATION: The reference sequence is identical to CP115843.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP115843.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP115843.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP115843.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP115843.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9bREFSEQ INFORMATION: The reference sequence is identical to CP115843.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: FullREFSEQ INFORMATION: The reference sequence is identical to CP115843.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: YesREFSEQ INFORMATION: The reference sequence is identical to CP115843.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4xREFSEQ INFORMATION: The reference sequence is identical to CP115843.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinIONREFSEQ INFORMATION: The reference sequence is identical to CP115843.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP115843.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP115843.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP115843.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09REFSEQ INFORMATION: The reference sequence is identical to CP115843.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11REFSEQ INFORMATION: The reference sequence is identical to CP115843.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP115843.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP115843.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP115843.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP115843.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9REFSEQ INFORMATION: The reference sequence is identical to CP115843.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP115843.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638REFSEQ INFORMATION: The reference sequence is identical to CP115843.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563REFSEQ INFORMATION: The reference sequence is identical to CP115843.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477REFSEQ INFORMATION: The reference sequence is identical to CP115843.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477REFSEQ INFORMATION: The reference sequence is identical to CP115843.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75REFSEQ INFORMATION: The reference sequence is identical to CP115843.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP115843.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP115843.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56REFSEQ INFORMATION: The reference sequence is identical to CP115843.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to CP115843.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86REFSEQ INFORMATION: The reference sequence is identical to CP115843.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86 CDSs (without protein) :: 86REFSEQ INFORMATION: The reference sequence is identical to CP115843.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86 CDSs (without protein) :: 86 Pseudo Genes (ambiguous residues) :: 0 of 86REFSEQ INFORMATION: The reference sequence is identical to CP115843.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86 CDSs (without protein) :: 86 Pseudo Genes (ambiguous residues) :: 0 of 86 Pseudo Genes (frameshifted) :: 44 of 86REFSEQ INFORMATION: The reference sequence is identical to CP115843.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86 CDSs (without protein) :: 86 Pseudo Genes (ambiguous residues) :: 0 of 86 Pseudo Genes (frameshifted) :: 44 of 86 Pseudo Genes (incomplete) :: 57 of 86REFSEQ INFORMATION: The reference sequence is identical to CP115843.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86 CDSs (without protein) :: 86 Pseudo Genes (ambiguous residues) :: 0 of 86 Pseudo Genes (frameshifted) :: 44 of 86 Pseudo Genes (incomplete) :: 57 of 86 Pseudo Genes (internal stop) :: 13 of 86REFSEQ INFORMATION: The reference sequence is identical to CP115843.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86 CDSs (without protein) :: 86 Pseudo Genes (ambiguous residues) :: 0 of 86 Pseudo Genes (frameshifted) :: 44 of 86 Pseudo Genes (incomplete) :: 57 of 86 Pseudo Genes (internal stop) :: 13 of 86 Pseudo Genes (multiple problems) :: 26 of 86REFSEQ INFORMATION: The reference sequence is identical to CP115843.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86 CDSs (without protein) :: 86 Pseudo Genes (ambiguous residues) :: 0 of 86 Pseudo Genes (frameshifted) :: 44 of 86 Pseudo Genes (incomplete) :: 57 of 86 Pseudo Genes (internal stop) :: 13 of 86 Pseudo Genes (multiple problems) :: 26 of 86 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP115843.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86 CDSs (without protein) :: 86 Pseudo Genes (ambiguous residues) :: 0 of 86 Pseudo Genes (frameshifted) :: 44 of 86 Pseudo Genes (incomplete) :: 57 of 86 Pseudo Genes (internal stop) :: 13 of 86 Pseudo Genes (multiple problems) :: 26 of 86 ##Genome-Annotation-Data-END## COMPLETENESS: full length. NZ_CP115844.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP115844.1.REFSEQ INFORMATION: The reference sequence is identical to CP115844.1. Bacteria and source DNA available from Jeffrey H Chang.REFSEQ INFORMATION: The reference sequence is identical to CP115844.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP115844.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP115844.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP115844.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP115844.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9bREFSEQ INFORMATION: The reference sequence is identical to CP115844.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: FullREFSEQ INFORMATION: The reference sequence is identical to CP115844.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: YesREFSEQ INFORMATION: The reference sequence is identical to CP115844.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4xREFSEQ INFORMATION: The reference sequence is identical to CP115844.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinIONREFSEQ INFORMATION: The reference sequence is identical to CP115844.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP115844.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP115844.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP115844.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09REFSEQ INFORMATION: The reference sequence is identical to CP115844.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11REFSEQ INFORMATION: The reference sequence is identical to CP115844.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP115844.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP115844.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP115844.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP115844.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9REFSEQ INFORMATION: The reference sequence is identical to CP115844.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP115844.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638REFSEQ INFORMATION: The reference sequence is identical to CP115844.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563REFSEQ INFORMATION: The reference sequence is identical to CP115844.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477REFSEQ INFORMATION: The reference sequence is identical to CP115844.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477REFSEQ INFORMATION: The reference sequence is identical to CP115844.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75REFSEQ INFORMATION: The reference sequence is identical to CP115844.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP115844.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP115844.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56REFSEQ INFORMATION: The reference sequence is identical to CP115844.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to CP115844.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86REFSEQ INFORMATION: The reference sequence is identical to CP115844.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86 CDSs (without protein) :: 86REFSEQ INFORMATION: The reference sequence is identical to CP115844.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86 CDSs (without protein) :: 86 Pseudo Genes (ambiguous residues) :: 0 of 86REFSEQ INFORMATION: The reference sequence is identical to CP115844.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86 CDSs (without protein) :: 86 Pseudo Genes (ambiguous residues) :: 0 of 86 Pseudo Genes (frameshifted) :: 44 of 86REFSEQ INFORMATION: The reference sequence is identical to CP115844.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86 CDSs (without protein) :: 86 Pseudo Genes (ambiguous residues) :: 0 of 86 Pseudo Genes (frameshifted) :: 44 of 86 Pseudo Genes (incomplete) :: 57 of 86REFSEQ INFORMATION: The reference sequence is identical to CP115844.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86 CDSs (without protein) :: 86 Pseudo Genes (ambiguous residues) :: 0 of 86 Pseudo Genes (frameshifted) :: 44 of 86 Pseudo Genes (incomplete) :: 57 of 86 Pseudo Genes (internal stop) :: 13 of 86REFSEQ INFORMATION: The reference sequence is identical to CP115844.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86 CDSs (without protein) :: 86 Pseudo Genes (ambiguous residues) :: 0 of 86 Pseudo Genes (frameshifted) :: 44 of 86 Pseudo Genes (incomplete) :: 57 of 86 Pseudo Genes (internal stop) :: 13 of 86 Pseudo Genes (multiple problems) :: 26 of 86REFSEQ INFORMATION: The reference sequence is identical to CP115844.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86 CDSs (without protein) :: 86 Pseudo Genes (ambiguous residues) :: 0 of 86 Pseudo Genes (frameshifted) :: 44 of 86 Pseudo Genes (incomplete) :: 57 of 86 Pseudo Genes (internal stop) :: 13 of 86 Pseudo Genes (multiple problems) :: 26 of 86 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP115844.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86 CDSs (without protein) :: 86 Pseudo Genes (ambiguous residues) :: 0 of 86 Pseudo Genes (frameshifted) :: 44 of 86 Pseudo Genes (incomplete) :: 57 of 86 Pseudo Genes (internal stop) :: 13 of 86 Pseudo Genes (multiple problems) :: 26 of 86 ##Genome-Annotation-Data-END## COMPLETENESS: full length. NZ_CP115845.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP115845.1.REFSEQ INFORMATION: The reference sequence is identical to CP115845.1. Bacteria and source DNA available from Jeffrey H Chang.REFSEQ INFORMATION: The reference sequence is identical to CP115845.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP115845.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP115845.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP115845.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP115845.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9bREFSEQ INFORMATION: The reference sequence is identical to CP115845.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: FullREFSEQ INFORMATION: The reference sequence is identical to CP115845.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: YesREFSEQ INFORMATION: The reference sequence is identical to CP115845.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4xREFSEQ INFORMATION: The reference sequence is identical to CP115845.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinIONREFSEQ INFORMATION: The reference sequence is identical to CP115845.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP115845.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP115845.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP115845.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09REFSEQ INFORMATION: The reference sequence is identical to CP115845.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11REFSEQ INFORMATION: The reference sequence is identical to CP115845.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP115845.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP115845.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP115845.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP115845.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9REFSEQ INFORMATION: The reference sequence is identical to CP115845.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP115845.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638REFSEQ INFORMATION: The reference sequence is identical to CP115845.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563REFSEQ INFORMATION: The reference sequence is identical to CP115845.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477REFSEQ INFORMATION: The reference sequence is identical to CP115845.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477REFSEQ INFORMATION: The reference sequence is identical to CP115845.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75REFSEQ INFORMATION: The reference sequence is identical to CP115845.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP115845.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP115845.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56REFSEQ INFORMATION: The reference sequence is identical to CP115845.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to CP115845.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86REFSEQ INFORMATION: The reference sequence is identical to CP115845.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86 CDSs (without protein) :: 86REFSEQ INFORMATION: The reference sequence is identical to CP115845.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86 CDSs (without protein) :: 86 Pseudo Genes (ambiguous residues) :: 0 of 86REFSEQ INFORMATION: The reference sequence is identical to CP115845.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86 CDSs (without protein) :: 86 Pseudo Genes (ambiguous residues) :: 0 of 86 Pseudo Genes (frameshifted) :: 44 of 86REFSEQ INFORMATION: The reference sequence is identical to CP115845.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86 CDSs (without protein) :: 86 Pseudo Genes (ambiguous residues) :: 0 of 86 Pseudo Genes (frameshifted) :: 44 of 86 Pseudo Genes (incomplete) :: 57 of 86REFSEQ INFORMATION: The reference sequence is identical to CP115845.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86 CDSs (without protein) :: 86 Pseudo Genes (ambiguous residues) :: 0 of 86 Pseudo Genes (frameshifted) :: 44 of 86 Pseudo Genes (incomplete) :: 57 of 86 Pseudo Genes (internal stop) :: 13 of 86REFSEQ INFORMATION: The reference sequence is identical to CP115845.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86 CDSs (without protein) :: 86 Pseudo Genes (ambiguous residues) :: 0 of 86 Pseudo Genes (frameshifted) :: 44 of 86 Pseudo Genes (incomplete) :: 57 of 86 Pseudo Genes (internal stop) :: 13 of 86 Pseudo Genes (multiple problems) :: 26 of 86REFSEQ INFORMATION: The reference sequence is identical to CP115845.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86 CDSs (without protein) :: 86 Pseudo Genes (ambiguous residues) :: 0 of 86 Pseudo Genes (frameshifted) :: 44 of 86 Pseudo Genes (incomplete) :: 57 of 86 Pseudo Genes (internal stop) :: 13 of 86 Pseudo Genes (multiple problems) :: 26 of 86 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP115845.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86 CDSs (without protein) :: 86 Pseudo Genes (ambiguous residues) :: 0 of 86 Pseudo Genes (frameshifted) :: 44 of 86 Pseudo Genes (incomplete) :: 57 of 86 Pseudo Genes (internal stop) :: 13 of 86 Pseudo Genes (multiple problems) :: 26 of 86 ##Genome-Annotation-Data-END## COMPLETENESS: full length. NZ_CP115846.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP115846.1.REFSEQ INFORMATION: The reference sequence is identical to CP115846.1. Bacteria and source DNA available from Jeffrey H Chang.REFSEQ INFORMATION: The reference sequence is identical to CP115846.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP115846.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP115846.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP115846.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP115846.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9bREFSEQ INFORMATION: The reference sequence is identical to CP115846.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: FullREFSEQ INFORMATION: The reference sequence is identical to CP115846.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: YesREFSEQ INFORMATION: The reference sequence is identical to CP115846.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4xREFSEQ INFORMATION: The reference sequence is identical to CP115846.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinIONREFSEQ INFORMATION: The reference sequence is identical to CP115846.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP115846.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP115846.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP115846.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09REFSEQ INFORMATION: The reference sequence is identical to CP115846.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11REFSEQ INFORMATION: The reference sequence is identical to CP115846.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP115846.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP115846.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP115846.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP115846.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9REFSEQ INFORMATION: The reference sequence is identical to CP115846.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP115846.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638REFSEQ INFORMATION: The reference sequence is identical to CP115846.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563REFSEQ INFORMATION: The reference sequence is identical to CP115846.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477REFSEQ INFORMATION: The reference sequence is identical to CP115846.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477REFSEQ INFORMATION: The reference sequence is identical to CP115846.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75REFSEQ INFORMATION: The reference sequence is identical to CP115846.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP115846.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP115846.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56REFSEQ INFORMATION: The reference sequence is identical to CP115846.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to CP115846.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86REFSEQ INFORMATION: The reference sequence is identical to CP115846.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86 CDSs (without protein) :: 86REFSEQ INFORMATION: The reference sequence is identical to CP115846.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86 CDSs (without protein) :: 86 Pseudo Genes (ambiguous residues) :: 0 of 86REFSEQ INFORMATION: The reference sequence is identical to CP115846.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86 CDSs (without protein) :: 86 Pseudo Genes (ambiguous residues) :: 0 of 86 Pseudo Genes (frameshifted) :: 44 of 86REFSEQ INFORMATION: The reference sequence is identical to CP115846.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86 CDSs (without protein) :: 86 Pseudo Genes (ambiguous residues) :: 0 of 86 Pseudo Genes (frameshifted) :: 44 of 86 Pseudo Genes (incomplete) :: 57 of 86REFSEQ INFORMATION: The reference sequence is identical to CP115846.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86 CDSs (without protein) :: 86 Pseudo Genes (ambiguous residues) :: 0 of 86 Pseudo Genes (frameshifted) :: 44 of 86 Pseudo Genes (incomplete) :: 57 of 86 Pseudo Genes (internal stop) :: 13 of 86REFSEQ INFORMATION: The reference sequence is identical to CP115846.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86 CDSs (without protein) :: 86 Pseudo Genes (ambiguous residues) :: 0 of 86 Pseudo Genes (frameshifted) :: 44 of 86 Pseudo Genes (incomplete) :: 57 of 86 Pseudo Genes (internal stop) :: 13 of 86 Pseudo Genes (multiple problems) :: 26 of 86REFSEQ INFORMATION: The reference sequence is identical to CP115846.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86 CDSs (without protein) :: 86 Pseudo Genes (ambiguous residues) :: 0 of 86 Pseudo Genes (frameshifted) :: 44 of 86 Pseudo Genes (incomplete) :: 57 of 86 Pseudo Genes (internal stop) :: 13 of 86 Pseudo Genes (multiple problems) :: 26 of 86 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP115846.1. Bacteria and source DNA available from Jeffrey H Chang. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. v0.4.9b Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 326.4x Sequencing Technology :: Illumina; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_013318015.2-RS_2024_12_09 Annotation Date :: 12/09/2024 19:33:11 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,638 CDSs (total) :: 5,563 Genes (coding) :: 5,477 CDSs (with protein) :: 5,477 Genes (RNA) :: 75 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 56 ncRNAs :: 4 Pseudo Genes (total) :: 86 CDSs (without protein) :: 86 Pseudo Genes (ambiguous residues) :: 0 of 86 Pseudo Genes (frameshifted) :: 44 of 86 Pseudo Genes (incomplete) :: 57 of 86 Pseudo Genes (internal stop) :: 13 of 86 Pseudo Genes (multiple problems) :: 26 of 86 ##Genome-Annotation-Data-END## COMPLETENESS: full length.