-- dump date 20140618_194210 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_740850.1 114319167 4269605 75..1430 1 NC_008340.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosome replication initiator DnaA 1430 dnaA 4269605 dnaA Alkalilimnicola ehrlichii MLHE-1 chromosome replication initiator DnaA YP_740850.1 75 D 187272 CDS YP_740851.1 114319168 4269606 1651..2751 1 NC_008340.1 KEGG: xoo:XOO0002 DNA polymerase III beta chain; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III, beta chain; DNA polymerase III subunit beta 2751 4269606 Mlg_0002 Alkalilimnicola ehrlichii MLHE-1 DNA polymerase III subunit beta YP_740851.1 1651 D 187272 CDS YP_740852.1 114319169 4269534 2816..3880 1 NC_008340.1 TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein; KEGG: sdn:Sden_0003 DNA replication and repair protein RecF; DNA replication and repair protein RecF 3880 4269534 Mlg_0003 Alkalilimnicola ehrlichii MLHE-1 DNA replication and repair protein RecF YP_740852.1 2816 D 187272 CDS YP_740853.1 114319170 4269535 3952..6369 1 NC_008340.1 KEGG: vvy:VV0014 DNA gyrase, subunit B; TIGRFAM: DNA gyrase, B subunit; PFAM: DNA gyrase, subunit B domain protein; ATP-binding region, ATPase domain protein domain protein; TOPRIM domain protein; DNA topoisomerase, type IIA, subunit B, region 2 domain protein; SMART: DNA topoisomerase II; DNA gyrase subunit B 6369 4269535 Mlg_0004 Alkalilimnicola ehrlichii MLHE-1 DNA gyrase subunit B YP_740853.1 3952 D 187272 CDS YP_740854.1 114319171 4269536 6397..7170 1 NC_008340.1 KEGG: stt:t0948 trehalose phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: trehalose-phosphatase; sucrose-6F-phosphate phosphohydrolase; HAD family hydrolase 7170 4269536 Mlg_0005 Alkalilimnicola ehrlichii MLHE-1 HAD family hydrolase YP_740854.1 6397 D 187272 CDS YP_740855.1 114319172 4269537 7163..8950 1 NC_008340.1 PFAM: glycoside hydrolase 15-related; KEGG: csa:Csal_0235 glycoside hydrolase 15-related; glycoside hydrolase 15-like protein 8950 4269537 Mlg_0006 Alkalilimnicola ehrlichii MLHE-1 glycoside hydrolase 15-like protein YP_740855.1 7163 D 187272 CDS YP_740856.1 114319173 4269538 9005..10393 1 NC_008340.1 PFAM: glycosyl transferase, family 20; KEGG: rru:Rru_A2485 alpha,alpha-trehalose-phosphate synthase (UDP-forming); alpha,alpha-trehalose-phosphate synthase 10393 4269538 Mlg_0007 Alkalilimnicola ehrlichii MLHE-1 alpha,alpha-trehalose-phosphate synthase YP_740856.1 9005 D 187272 CDS YP_740857.1 114319174 4269539 10399..11340 1 NC_008340.1 PFAM: Glucokinase; KEGG: mag:amb2112 glucokinase; glucokinase 11340 4269539 Mlg_0008 Alkalilimnicola ehrlichii MLHE-1 glucokinase YP_740857.1 10399 D 187272 CDS YP_740858.1 114319175 4269540 complement(11353..12114) 1 NC_008340.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: neu:NE1184 phospholipid and glycerol acyltransferase (from 'motifs_6.msf'); phospholipid/glycerol acyltransferase 12114 4269540 Mlg_0009 Alkalilimnicola ehrlichii MLHE-1 phospholipid/glycerol acyltransferase YP_740858.1 11353 R 187272 CDS YP_740859.1 114319176 4269541 complement(12111..12689) 1 NC_008340.1 TIGRFAM: histidinol-phosphate phosphatase; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: tbd:Tbd_2346 histidinol-phosphate phosphatase; D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase 12689 4269541 Mlg_0010 Alkalilimnicola ehrlichii MLHE-1 D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase YP_740859.1 12111 R 187272 CDS YP_740860.1 114319177 4269542 complement(12664..14745) 1 NC_008340.1 KEGG: tcx:Tcr_0355 glycyl-tRNA synthetase, beta subunit; glycine--tRNA ligase 14745 4269542 Mlg_0011 Alkalilimnicola ehrlichii MLHE-1 glycine--tRNA ligase YP_740860.1 12664 R 187272 CDS YP_740861.1 114319178 4269543 complement(14738..15691) 1 NC_008340.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 15691 glyQ 4269543 glyQ Alkalilimnicola ehrlichii MLHE-1 glycyl-tRNA synthetase subunit alpha YP_740861.1 14738 R 187272 CDS YP_740862.1 114319179 4269544 16030..17445 1 NC_008340.1 KEGG: mca:MCA1677 glutamine synthetase, type I; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp; L-glutamine synthetase 17445 4269544 Mlg_0013 Alkalilimnicola ehrlichii MLHE-1 L-glutamine synthetase YP_740862.1 16030 D 187272 CDS YP_740863.1 114319180 4269545 17555..18082 1 NC_008340.1 KEGG: csa:Csal_0244 hypothetical protein; hypothetical protein 18082 4269545 Mlg_0014 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_740863.1 17555 D 187272 CDS YP_740864.1 114319181 4269546 18231..19283 1 NC_008340.1 KEGG: pae:PA5124 two-component sensor NtrB; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; nitrogen-specific signal transduction histidine kinase NtrB 19283 4269546 Mlg_0015 Alkalilimnicola ehrlichii MLHE-1 nitrogen-specific signal transduction histidine kinase NtrB YP_740864.1 18231 D 187272 CDS YP_740865.1 114319182 4269547 19280..20686 1 NC_008340.1 KEGG: pae:PA5125 two-component response regulator NtrC; TIGRFAM: nitrogen regulation protein NR(I); PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; Fis family transcriptional regulator 20686 4269547 Mlg_0016 Alkalilimnicola ehrlichii MLHE-1 Fis family transcriptional regulator YP_740865.1 19280 D 187272 CDS YP_740866.1 114319183 4269548 complement(20902..21531) 1 NC_008340.1 PFAM: Radical SAM domain protein; KEGG: fra:Francci3_3380 conserved hypothetical protein; radical SAM domain-containing protein 21531 4269548 Mlg_0017 Alkalilimnicola ehrlichii MLHE-1 radical SAM domain-containing protein YP_740866.1 20902 R 187272 CDS YP_740867.1 114319184 4269549 complement(21528..22703) 1 NC_008340.1 KEGG: pca:Pcar_2564 hypothetical protein; hypothetical protein 22703 4269549 Mlg_0018 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_740867.1 21528 R 187272 CDS YP_740868.1 114319185 4269550 complement(22813..24474) 1 NC_008340.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; molecular chaperone GroEL 24474 groEL 4269550 groEL Alkalilimnicola ehrlichii MLHE-1 molecular chaperone GroEL YP_740868.1 22813 R 187272 CDS YP_740869.1 114319186 4269551 complement(24517..24804) 1 NC_008340.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 24804 groES 4269551 groES Alkalilimnicola ehrlichii MLHE-1 co-chaperonin GroES YP_740869.1 24517 R 187272 CDS YP_740870.1 114319187 4268878 25024..25398 1 NC_008340.1 PFAM: CutA1 divalent ion tolerance protein; KEGG: noc:Noc_1056 CutA1 divalent ion tolerance protein; CutA1 divalent ion tolerance protein 25398 4268878 Mlg_0021 Alkalilimnicola ehrlichii MLHE-1 CutA1 divalent ion tolerance protein YP_740870.1 25024 D 187272 CDS YP_740871.1 114319188 4268879 25408..27252 1 NC_008340.1 PFAM: cytochrome c biogenesis protein, transmembrane region; KEGG: tcx:Tcr_0446 protein-disulfide reductase; cytochrome c biogenesis protein, transmembrane region 27252 4268879 Mlg_0022 Alkalilimnicola ehrlichii MLHE-1 cytochrome c biogenesis protein, transmembrane region YP_740871.1 25408 D 187272 CDS YP_740872.1 114319189 4268880 27249..27752 1 NC_008340.1 PFAM: Redoxin domain protein; KEGG: noc:Noc_1054 thioredoxin; redoxin domain-containing protein 27752 4268880 Mlg_0023 Alkalilimnicola ehrlichii MLHE-1 redoxin domain-containing protein YP_740872.1 27249 D 187272 CDS YP_740873.1 114319190 4268881 27880..28338 1 NC_008340.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 28338 4268881 Mlg_0024 Alkalilimnicola ehrlichii MLHE-1 3-dehydroquinate dehydratase YP_740873.1 27880 D 187272 CDS YP_740874.1 114319191 4268882 28338..28802 1 NC_008340.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: sbo:SBO_3133 acetylCoA carboxylase, BccP subunit; acetyl-CoA carboxylase, biotin carboxyl carrier protein 28802 4268882 Mlg_0025 Alkalilimnicola ehrlichii MLHE-1 acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_740874.1 28338 D 187272 CDS YP_740875.1 114319192 4268883 28822..30165 1 NC_008340.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: noc:Noc_1051 acetyl-CoA carboxylase, biotin carboxylase; acetyl-CoA carboxylase, biotin carboxylase 30165 4268883 Mlg_0026 Alkalilimnicola ehrlichii MLHE-1 acetyl-CoA carboxylase, biotin carboxylase YP_740875.1 28822 D 187272 CDS YP_740876.1 114319193 4268884 30213..30788 1 NC_008340.1 PFAM: YfaZ family protein; KEGG: hch:HCH_05290 hypothetical protein; YfaZ family protein 30788 4268884 Mlg_0027 Alkalilimnicola ehrlichii MLHE-1 YfaZ family protein YP_740876.1 30213 D 187272 CDS YP_740877.1 114319194 4268885 complement(30819..31628) 1 NC_008340.1 PFAM: protein of unknown function DUF81; KEGG: pae:PA0340 hypothetical protein; hypothetical protein 31628 4268885 Mlg_0028 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_740877.1 30819 R 187272 CDS YP_740878.1 114319195 4268886 31748..32710 1 NC_008340.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility C-terminal domain; KEGG: noc:Noc_0390 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 32710 4268886 Mlg_0029 Alkalilimnicola ehrlichii MLHE-1 NAD-dependent epimerase/dehydratase YP_740878.1 31748 D 187272 CDS YP_740879.1 114319196 4268887 32714..33955 1 NC_008340.1 PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase, HD sub domain; KEGG: pfl:PFL_5656 tRNA nucleotidyltransferase; metal dependent phosphohydrolase 33955 4268887 Mlg_0030 Alkalilimnicola ehrlichii MLHE-1 metal dependent phosphohydrolase YP_740879.1 32714 D 187272 CDS YP_740880.1 114319197 4268888 complement(33968..35407) 1 NC_008340.1 hypothetical protein 35407 4268888 Mlg_0031 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_740880.1 33968 R 187272 CDS YP_740881.1 114319198 4268889 complement(35512..36552) 1 NC_008340.1 PFAM: aldo/keto reductase; KEGG: csa:Csal_3045 aldo/keto reductase; aldo/keto reductase 36552 4268889 Mlg_0032 Alkalilimnicola ehrlichii MLHE-1 aldo/keto reductase YP_740881.1 35512 R 187272 CDS YP_740882.1 114319199 4268890 complement(36586..37299) 1 NC_008340.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 37299 trmB 4268890 trmB Alkalilimnicola ehrlichii MLHE-1 tRNA (guanine-N(7)-)-methyltransferase YP_740882.1 36586 R 187272 CDS YP_740883.1 114319200 4268891 complement(37301..38089) 1 NC_008340.1 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase 38089 thiG 4268891 thiG Alkalilimnicola ehrlichii MLHE-1 thiazole synthase YP_740883.1 37301 R 187272 CDS YP_740884.1 114319201 4268892 complement(38147..38368) 1 NC_008340.1 TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: csa:Csal_3147 thiamine biosynthesis protein ThiS; thiamine biosynthesis protein ThiS 38368 4268892 Mlg_0035 Alkalilimnicola ehrlichii MLHE-1 thiamine biosynthesis protein ThiS YP_740884.1 38147 R 187272 CDS YP_740885.1 114319202 4268894 complement(39904..40293) 1 NC_008340.1 hypothetical protein 40293 4268894 Mlg_0037 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_740885.1 39904 R 187272 CDS YP_740886.1 114319203 4270907 complement(40293..41309) 1 NC_008340.1 hypothetical protein 41309 4270907 Mlg_0038 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_740886.1 40293 R 187272 CDS YP_740887.1 114319204 4270908 complement(41312..41827) 1 NC_008340.1 hypothetical protein 41827 4270908 Mlg_0039 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_740887.1 41312 R 187272 CDS YP_740888.1 114319205 4270909 complement(41926..43257) 1 NC_008340.1 hypothetical protein 43257 4270909 Mlg_0040 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_740888.1 41926 R 187272 CDS YP_740889.1 114319206 4270910 complement(43278..46577) 1 NC_008340.1 KEGG: vch:VCA0020 hypothetical protein; hypothetical protein 46577 4270910 Mlg_0041 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_740889.1 43278 R 187272 CDS YP_740890.1 114319207 4270911 complement(46574..47473) 1 NC_008340.1 KEGG: vch:VCA0019 hypothetical protein; hypothetical protein 47473 4270911 Mlg_0042 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_740890.1 46574 R 187272 CDS YP_740891.1 114319208 4270912 complement(47470..48432) 1 NC_008340.1 PFAM: Rhs element Vgr protein; KEGG: vch:VC1416 VgrG protein; Rhs element Vgr protein 48432 4270912 Mlg_0043 Alkalilimnicola ehrlichii MLHE-1 Rhs element Vgr protein YP_740891.1 47470 R 187272 CDS YP_740892.1 114319209 4270914 49079..49588 1 NC_008340.1 PFAM: Uncharacterised conserved protein UCP028301; KEGG: vch:VCA0107 hypothetical protein; hypothetical protein 49588 4270914 Mlg_0045 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_740892.1 49079 D 187272 CDS YP_740893.1 114319210 4270915 49623..51101 1 NC_008340.1 PFAM: protein of unknown function DUF877; KEGG: vch:VCA0108 hypothetical protein; hypothetical protein 51101 4270915 Mlg_0046 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_740893.1 49623 D 187272 CDS YP_740894.1 114319211 4270916 51108..51536 1 NC_008340.1 PFAM: protein of unknown function DUF1316; KEGG: eca:ECA3443 hypothetical protein; hypothetical protein 51536 4270916 Mlg_0047 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_740894.1 51108 D 187272 CDS YP_740895.1 114319212 4270917 51556..53319 1 NC_008340.1 PFAM: protein of unknown function DUF879; KEGG: vch:VCA0110 hypothetical protein; hypothetical protein 53319 4270917 Mlg_0048 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_740895.1 51556 D 187272 CDS YP_740896.1 114319213 4270918 53316..54302 1 NC_008340.1 PFAM: protein of unknown function DUF1305; KEGG: eca:ECA3441 hypothetical protein; hypothetical protein 54302 4270918 Mlg_0049 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_740896.1 53316 D 187272 CDS YP_740897.1 114319214 4270919 54307..55017 1 NC_008340.1 KEGG: vch:VCA0112 FHA domain-containing protein; FHA domain-containing protein 55017 4270919 Mlg_0050 Alkalilimnicola ehrlichii MLHE-1 FHA domain-containing protein YP_740897.1 54307 D 187272 CDS YP_740898.1 114319215 4270920 55014..55586 1 NC_008340.1 KEGG: plu:plu0366 hypothetical protein; hypothetical protein 55586 4270920 Mlg_0051 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_740898.1 55014 D 187272 CDS YP_740899.1 114319216 4270921 55586..56923 1 NC_008340.1 PFAM: protein of unknown function DUF876; KEGG: vch:VCA0114 hypothetical protein; hypothetical protein 56923 4270921 Mlg_0052 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_740899.1 55586 D 187272 CDS YP_740900.1 114319217 4270922 56926..57741 1 NC_008340.1 KEGG: vch:VCA0115 hypothetical protein; hypothetical protein 57741 4270922 Mlg_0053 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_740900.1 56926 D 187272 CDS YP_740901.1 114319218 4270923 57738..59315 1 NC_008340.1 PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: vch:VCA0117 sigma-54 dependent transcriptional regulator; Fis family transcriptional regulator 59315 4270923 Mlg_0054 Alkalilimnicola ehrlichii MLHE-1 Fis family transcriptional regulator YP_740901.1 57738 D 187272 CDS YP_740902.1 114319219 4270924 59312..59959 1 NC_008340.1 KEGG: yps:YPTB3627 hypothetical protein; hypothetical protein 59959 4270924 Mlg_0055 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_740902.1 59312 D 187272 CDS YP_740903.1 114319220 4270334 59947..61389 1 NC_008340.1 PFAM: ImpA domain protein; KEGG: vch:VCA0119 hypothetical protein; ImpA domain-containing protein 61389 4270334 Mlg_0056 Alkalilimnicola ehrlichii MLHE-1 ImpA domain-containing protein YP_740903.1 59947 D 187272 CDS YP_740904.1 114319221 4270335 61425..65042 1 NC_008340.1 PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: vch:VCA0120 IcmF-related protein; ImcF domain-containing protein 65042 4270335 Mlg_0057 Alkalilimnicola ehrlichii MLHE-1 ImcF domain-containing protein YP_740904.1 61425 D 187272 CDS YP_740905.1 114319222 4270336 65285..65803 1 NC_008340.1 PFAM: protein of unknown function DUF796; KEGG: eca:ECA2866 hypothetical protein; hypothetical protein 65803 4270336 Mlg_0058 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_740905.1 65285 D 187272 CDS YP_740906.1 114319223 4270337 65890..66189 1 NC_008340.1 PFAM: PAAR repeat-containing protein; KEGG: eca:ECA3478 hypothetical protein; PAAR repeat-containing protein 66189 4270337 Mlg_0059 Alkalilimnicola ehrlichii MLHE-1 PAAR repeat-containing protein YP_740906.1 65890 D 187272 CDS YP_740907.1 114319224 4270338 66332..66931 1 NC_008340.1 hypothetical protein 66931 4270338 Mlg_0060 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_740907.1 66332 D 187272 CDS YP_740908.1 114319225 4270339 67016..67855 1 NC_008340.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 67855 dapF 4270339 dapF Alkalilimnicola ehrlichii MLHE-1 diaminopimelate epimerase YP_740908.1 67016 D 187272 CDS YP_740909.1 114319226 4270340 67913..68611 1 NC_008340.1 PFAM: protein of unknown function DUF484; KEGG: noc:Noc_0317 protein of unknown function DUF484; hypothetical protein 68611 4270340 Mlg_0062 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_740909.1 67913 D 187272 CDS YP_740910.1 114319227 4270341 68618..69532 1 NC_008340.1 TIGRFAM: tyrosine recombinase XerC; PFAM: phage integrase; phage integrase domain protein SAM domain protein; KEGG: pae:PA5280 site-specific recombinase Sss; tyrosine recombinase XerC 69532 4270341 Mlg_0063 Alkalilimnicola ehrlichii MLHE-1 tyrosine recombinase XerC YP_740910.1 68618 D 187272 CDS YP_740911.1 114319228 4270342 69593..70225 1 NC_008340.1 PFAM: regulatory protein, TetR; KEGG: dar:Daro_1527 regulatory protein, TetR; TetR family transcriptional regulator 70225 4270342 Mlg_0064 Alkalilimnicola ehrlichii MLHE-1 TetR family transcriptional regulator YP_740911.1 69593 D 187272 CDS YP_740912.1 114319229 4270343 70272..71252 1 NC_008340.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: eba:ebA3654 alcohol dehydrogenase; alcohol dehydrogenase 71252 4270343 Mlg_0065 Alkalilimnicola ehrlichii MLHE-1 alcohol dehydrogenase YP_740912.1 70272 D 187272 CDS YP_740913.1 114319230 4270344 71434..71985 1 NC_008340.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 71985 4270344 Mlg_0066 Alkalilimnicola ehrlichii MLHE-1 ATP-dependent protease peptidase subunit YP_740913.1 71434 D 187272 CDS YP_740914.1 114319231 4270345 72000..73322 1 NC_008340.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 73322 hslU 4270345 hslU Alkalilimnicola ehrlichii MLHE-1 ATP-dependent protease ATP-binding subunit HslU YP_740914.1 72000 D 187272 CDS YP_740915.1 114319232 4270346 73394..73765 1 NC_008340.1 PFAM: protein of unknown function DUF971; KEGG: noc:Noc_2342 protein of unknown function DUF971; hypothetical protein 73765 4270346 Mlg_0068 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_740915.1 73394 D 187272 CDS YP_740916.1 114319233 4270347 73769..74545 1 NC_008340.1 TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferases; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: dar:Daro_4117 ubiquinone/menaquinone biosynthesis methyltransferase; demethylmenaquinone methyltransferase 74545 4270347 Mlg_0069 Alkalilimnicola ehrlichii MLHE-1 demethylmenaquinone methyltransferase YP_740916.1 73769 D 187272 CDS YP_740917.1 114319234 4270348 74547..75176 1 NC_008340.1 PFAM: protein of unknown function DUF1243; KEGG: csa:Csal_0596 protein of unknown function DUF1243; hypothetical protein 75176 4270348 Mlg_0070 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_740917.1 74547 D 187272 CDS YP_740918.1 114319235 4270349 75173..76834 1 NC_008340.1 TIGRFAM: 2-polyprenylphenol 6-hydroxylase; PFAM: ABC-1 domain protein; KEGG: noc:Noc_2345 2-polyprenylphenol 6-hydroxylase; 2-octaprenylphenol hydroxylase 76834 4270349 Mlg_0071 Alkalilimnicola ehrlichii MLHE-1 2-octaprenylphenol hydroxylase YP_740918.1 75173 D 187272 CDS YP_740919.1 114319236 4270350 complement(76866..78752) 1 NC_008340.1 catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis; arginine decarboxylase 78752 4270350 Mlg_0072 Alkalilimnicola ehrlichii MLHE-1 arginine decarboxylase YP_740919.1 76866 R 187272 CDS YP_740920.1 114319237 4269901 78872..79732 1 NC_008340.1 catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase 79732 4269901 Mlg_0073 Alkalilimnicola ehrlichii MLHE-1 spermidine synthase YP_740920.1 78872 D 187272 CDS YP_740921.1 114319238 4269902 79807..82380 1 NC_008340.1 KEGG: neu:NE1700 diguanylate cyclase/phosphodiesterase domain 2 (EAL); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase 82380 4269902 Mlg_0074 Alkalilimnicola ehrlichii MLHE-1 PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase YP_740921.1 79807 D 187272 CDS YP_740922.1 114319239 4269903 82412..82969 1 NC_008340.1 PFAM: RDD domain containing protein; KEGG: tcx:Tcr_1706 RDD; RDD domain-containing protein 82969 4269903 Mlg_0075 Alkalilimnicola ehrlichii MLHE-1 RDD domain-containing protein YP_740922.1 82412 D 187272 CDS YP_740923.1 114319240 4269904 complement(82991..83800) 1 NC_008340.1 PFAM: conserved hypothetical protein 245; KEGG: noc:Noc_1835 conserved hypothetical protein 245; hypothetical protein 83800 4269904 Mlg_0076 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_740923.1 82991 R 187272 CDS YP_740924.1 114319241 4269905 complement(83797..84447) 1 NC_008340.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: hch:HCH_01608 ABC-type spermidine/putrescine transport system, ATPase components; ABC transporter-like protein 84447 4269905 Mlg_0077 Alkalilimnicola ehrlichii MLHE-1 ABC transporter-like protein YP_740924.1 83797 R 187272 CDS YP_740925.1 114319242 4269906 84577..87321 1 NC_008340.1 PFAM: transcriptional activator domain; KEGG: sme:SMa1591 adenylate cyclase; transcriptional activator domain-containing protein 87321 4269906 Mlg_0078 Alkalilimnicola ehrlichii MLHE-1 transcriptional activator domain-containing protein YP_740925.1 84577 D 187272 CDS YP_740926.1 114319243 4269907 complement(87516..88766) 1 NC_008340.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: tcx:Tcr_1500 ammonium transporter; ammonium transporter 88766 4269907 Mlg_0079 Alkalilimnicola ehrlichii MLHE-1 ammonium transporter YP_740926.1 87516 R 187272 CDS YP_740927.1 114319244 4269908 complement(88829..89167) 1 NC_008340.1 PFAM: nitrogen regulatory protein P-II; KEGG: hch:HCH_06398 nitrogen regulatory protein PII; nitrogen regulatory protein P-II 89167 4269908 Mlg_0080 Alkalilimnicola ehrlichii MLHE-1 nitrogen regulatory protein P-II YP_740927.1 88829 R 187272 CDS YP_740928.1 114319245 4269909 89410..89724 1 NC_008340.1 PFAM: protein of unknown function DUF526; KEGG: noc:Noc_2004 protein of unknown function DUF526; hypothetical protein 89724 4269909 Mlg_0081 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_740928.1 89410 D 187272 CDS YP_740929.1 114319246 4269910 89788..91305 1 NC_008340.1 KEGG: noc:Noc_2003 Mg chelatase-related protein; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase, ChlI subunit; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; Mg chelatase, subunit ChlI 91305 4269910 Mlg_0082 Alkalilimnicola ehrlichii MLHE-1 Mg chelatase, subunit ChlI YP_740929.1 89788 D 187272 CDS YP_740930.1 114319247 4269911 complement(91329..91883) 1 NC_008340.1 KEGG: bbr:BB4582 cytochrome c; cytochrome c 91883 4269911 Mlg_0083 Alkalilimnicola ehrlichii MLHE-1 cytochrome c YP_740930.1 91329 R 187272 CDS YP_740931.1 114319248 4269912 complement(92052..92966) 1 NC_008340.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 92966 4269912 Mlg_0084 Alkalilimnicola ehrlichii MLHE-1 acetylglutamate kinase YP_740931.1 92052 R 187272 CDS YP_740932.1 114319249 4269913 complement(93252..93461) 1 NC_008340.1 KEGG: noc:Noc_0305 hypothetical protein; hypothetical protein 93461 4269913 Mlg_0085 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_740932.1 93252 R 187272 CDS YP_740933.1 114319250 4269914 complement(93478..94143) 1 NC_008340.1 Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A 94143 4269914 Mlg_0086 Alkalilimnicola ehrlichii MLHE-1 ribose-5-phosphate isomerase A YP_740933.1 93478 R 187272 CDS YP_740934.1 114319251 4269915 94226..95740 1 NC_008340.1 threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway; threonine dehydratase 95740 4269915 Mlg_0087 Alkalilimnicola ehrlichii MLHE-1 threonine dehydratase YP_740934.1 94226 D 187272 CDS YP_740935.1 114319252 4269916 95778..96449 1 NC_008340.1 PFAM: regulatory protein, TetR; KEGG: neu:NE0300 bacterial regulatory proteins, TetR family; TetR family transcriptional regulator 96449 4269916 Mlg_0088 Alkalilimnicola ehrlichii MLHE-1 TetR family transcriptional regulator YP_740935.1 95778 D 187272 CDS YP_740936.1 114319253 4269917 96485..97528 1 NC_008340.1 PFAM: membrane-bound metal-dependent hydrolase; KEGG: noc:Noc_2821 membrane-bound metal-dependent hydrolase; membrane-bound metal-dependent hydrolase 97528 4269917 Mlg_0089 Alkalilimnicola ehrlichii MLHE-1 membrane-bound metal-dependent hydrolase YP_740936.1 96485 D 187272 CDS YP_740937.1 114319254 4268828 98663..100147 1 NC_008340.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; Ferric reductase domain protein transmembrane component, N-terminal domain; KEGG: ava:Ava_2874 oxidoreductase FAD/NAD(P)-binding; oxidoreductase FAD/NAD(P)-binding subunit 100147 4268828 Mlg_0090 Alkalilimnicola ehrlichii MLHE-1 oxidoreductase FAD/NAD(P)-binding subunit YP_740937.1 98663 D 187272 CDS YP_740938.1 114319255 4268829 complement(100152..101567) 1 NC_008340.1 PFAM: major facilitator superfamily MFS_1; KEGG: psb:Psyr_3491 major facilitator superfamily; major facilitator transporter 101567 4268829 Mlg_0091 Alkalilimnicola ehrlichii MLHE-1 major facilitator transporter YP_740938.1 100152 R 187272 CDS YP_740939.1 114319256 4268830 complement(101600..102112) 1 NC_008340.1 hypothetical protein 102112 4268830 Mlg_0092 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_740939.1 101600 R 187272 CDS YP_740940.1 114319257 4268831 102228..102761 1 NC_008340.1 KEGG: noc:Noc_2484 transcriptional activator RfaH; TIGRFAM: transcriptional activator RfaH; PFAM: transcription antitermination protein NusG; SMART: NGN domain protein; transcription antitermination protein NusG 102761 4268831 Mlg_0093 Alkalilimnicola ehrlichii MLHE-1 transcription antitermination protein NusG YP_740940.1 102228 D 187272 CDS YP_740941.1 114319258 4268832 complement(103174..103569) 1 NC_008340.1 PFAM: Invasion gene expression up-regulator, SirB; KEGG: neu:NE1499 hypothetical protein; invasion gene expression up-regulator, SirB 103569 4268832 Mlg_0094 Alkalilimnicola ehrlichii MLHE-1 invasion gene expression up-regulator, SirB YP_740941.1 103174 R 187272 CDS YP_740942.1 114319259 4268833 103675..104442 1 NC_008340.1 PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: hch:HCH_01736 molybdopterin biosynthesis protein MoeB; UBA/THIF-type NAD/FAD binding protein 104442 4268833 Mlg_0095 Alkalilimnicola ehrlichii MLHE-1 UBA/THIF-type NAD/FAD binding protein YP_740942.1 103675 D 187272 CDS YP_740943.1 114319260 4268834 complement(104452..106131) 1 NC_008340.1 PFAM: Peptidoglycan-binding domain 1 protein; KEGG: hch:HCH_04383 hypothetical protein; peptidoglycan binding domain-containing protein 106131 4268834 Mlg_0096 Alkalilimnicola ehrlichii MLHE-1 peptidoglycan binding domain-containing protein YP_740943.1 104452 R 187272 CDS YP_740944.1 114319261 4268835 106241..107095 1 NC_008340.1 PFAM: peptidase S1 and S6, chymotrypsin/Hap; KEGG: nmu:Nmul_A2676 peptidase S1 and S6, chymotrypsin/Hap; peptidase S1 and S6, chymotrypsin/Hap 107095 4268835 Mlg_0097 Alkalilimnicola ehrlichii MLHE-1 peptidase S1 and S6, chymotrypsin/Hap YP_740944.1 106241 D 187272 CDS YP_740945.1 114319262 4268836 107272..107970 1 NC_008340.1 TIGRFAM: PEP motif anchor-like; PFAM: protein of unknown function DUF1555; KEGG: tbd:Tbd_0194 hypothetical protein; PEP motif-containing protein 107970 4268836 Mlg_0098 Alkalilimnicola ehrlichii MLHE-1 PEP motif-containing protein YP_740945.1 107272 D 187272 CDS YP_740946.1 114319263 4268837 complement(108329..109117) 1 NC_008340.1 hypothetical protein 109117 4268837 Mlg_0099 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_740946.1 108329 R 187272 CDS YP_740947.1 114319264 4268838 complement(109155..110594) 1 NC_008340.1 KEGG: dde:Dde_2931 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase, type II; Nucleotidyl transferase; Cupin 2, conserved barrel domain protein; mannose-1-phosphate guanylyltransferase 110594 4268838 Mlg_0100 Alkalilimnicola ehrlichii MLHE-1 mannose-1-phosphate guanylyltransferase YP_740947.1 109155 R 187272 CDS YP_740948.1 114319265 4268839 complement(110648..111748) 1 NC_008340.1 KEGG: tbd:Tbd_2498 hypothetical protein; hypothetical protein 111748 4268839 Mlg_0101 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_740948.1 110648 R 187272 CDS YP_740949.1 114319266 4268840 complement(111745..112650) 1 NC_008340.1 KEGG: tbd:Tbd_2497 HPr kinase; HPr kinase 112650 4268840 Mlg_0102 Alkalilimnicola ehrlichii MLHE-1 HPr kinase YP_740949.1 111745 R 187272 CDS YP_740950.1 114319267 4268841 complement(112654..112965) 1 NC_008340.1 hypothetical protein 112965 4268841 Mlg_0103 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_740950.1 112654 R 187272 CDS YP_740951.1 114319268 4268842 complement(113050..113814) 1 NC_008340.1 KEGG: tbd:Tbd_2495 hypothetical protein; hypothetical protein 113814 4268842 Mlg_0104 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_740951.1 113050 R 187272 CDS YP_740952.1 114319269 4268843 complement(114145..114888) 1 NC_008340.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mba:Mbar_A0463 ubiquinone/menaquinone biosynthesis methyltransferase; type 11 methyltransferase 114888 4268843 Mlg_0105 Alkalilimnicola ehrlichii MLHE-1 type 11 methyltransferase YP_740952.1 114145 R 187272 CDS YP_740953.1 114319270 4268193 115181..116563 1 NC_008340.1 KEGG: nmu:Nmul_A2513 hypothetical protein; hypothetical protein 116563 4268193 Mlg_0106 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_740953.1 115181 D 187272 CDS YP_740954.1 114319271 4268194 complement(116491..119859) 1 NC_008340.1 PFAM: VanZ family protein; KEGG: nmu:Nmul_A2514 VanZ like protein; VanZ family protein 119859 4268194 Mlg_0107 Alkalilimnicola ehrlichii MLHE-1 VanZ family protein YP_740954.1 116491 R 187272 CDS YP_740955.1 114319272 4268195 120159..120977 1 NC_008340.1 TIGRFAM: PEP motif anchor-like; PEP motif-containing protein 120977 4268195 Mlg_0108 Alkalilimnicola ehrlichii MLHE-1 PEP motif-containing protein YP_740955.1 120159 D 187272 CDS YP_740956.1 114319273 4268196 121114..122268 1 NC_008340.1 PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: mag:amb0102 UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase 122268 4268196 Mlg_0109 Alkalilimnicola ehrlichii MLHE-1 UDP-N-acetylglucosamine 2-epimerase YP_740956.1 121114 D 187272 CDS YP_740957.1 114319274 4268197 122281..123231 1 NC_008340.1 PFAM: polysaccharide deacetylase; KEGG: noc:Noc_1967 polysaccharide deacetylase; polysaccharide deacetylase 123231 4268197 Mlg_0110 Alkalilimnicola ehrlichii MLHE-1 polysaccharide deacetylase YP_740957.1 122281 D 187272 CDS YP_740958.1 114319275 4268198 complement(123255..123758) 1 NC_008340.1 PFAM: Inorganic pyrophosphatase; KEGG: eba:ebA594 inorganic pyrophosphatase; inorganic pyrophosphatase 123758 4268198 Mlg_0111 Alkalilimnicola ehrlichii MLHE-1 inorganic pyrophosphatase YP_740958.1 123255 R 187272 CDS YP_740959.1 114319276 4268199 123844..124848 1 NC_008340.1 PFAM: polysaccharide deacetylase; KEGG: noc:Noc_2914 hypothetical protein; polysaccharide deacetylase 124848 4268199 Mlg_0112 Alkalilimnicola ehrlichii MLHE-1 polysaccharide deacetylase YP_740959.1 123844 D 187272 CDS YP_740960.1 114319277 4268200 124956..126005 1 NC_008340.1 KEGG: neu:NE1793 hypothetical protein; hypothetical protein 126005 4268200 Mlg_0113 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_740960.1 124956 D 187272 CDS YP_740961.1 114319278 4268201 complement(126691..127611) 1 NC_008340.1 KEGG: noc:Noc_2913 hypothetical protein; hypothetical protein 127611 4268201 Mlg_0114 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_740961.1 126691 R 187272 CDS YP_740962.1 114319279 4268202 complement(127750..128769) 1 NC_008340.1 PFAM: glycosyl transferase, family 2; KEGG: rsp:RSP_1539 glycosyl transferase, family 2; glycosyl transferase 128769 4268202 Mlg_0115 Alkalilimnicola ehrlichii MLHE-1 glycosyl transferase YP_740962.1 127750 R 187272 CDS YP_740963.1 114319280 4268203 complement(129056..130321) 1 NC_008340.1 PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; KEGG: cch:Cag_1580 transposase; transposase, IS204/IS1001/IS1096/IS1165 family protein 130321 4268203 Mlg_0116 Alkalilimnicola ehrlichii MLHE-1 transposase, IS204/IS1001/IS1096/IS1165 family protein YP_740963.1 129056 R 187272 CDS YP_740964.1 114319281 4268205 131646..133046 1 NC_008340.1 PFAM: O-antigen polymerase; KEGG: noc:Noc_1955 O-antigen polymerase; O-antigen polymerase 133046 4268205 Mlg_0119 Alkalilimnicola ehrlichii MLHE-1 O-antigen polymerase YP_740964.1 131646 D 187272 CDS YP_740965.1 114319282 4268206 133052..134959 1 NC_008340.1 KEGG: eba:ebA4313 hypothetical protein; hypothetical protein 134959 4268206 Mlg_0120 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_740965.1 133052 D 187272 CDS YP_740966.1 114319283 4268207 134960..135907 1 NC_008340.1 hypothetical protein 135907 4268207 Mlg_0121 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_740966.1 134960 D 187272 CDS YP_740967.1 114319284 4268208 135907..137793 1 NC_008340.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sru:SRU_0598 ABC transporter, multidrug efflux family; ABC transporter-like protein 137793 4268208 Mlg_0122 Alkalilimnicola ehrlichii MLHE-1 ABC transporter-like protein YP_740967.1 135907 D 187272 CDS YP_740968.1 114319285 4268209 137818..138822 1 NC_008340.1 KEGG: ana:all0589 unknown protein; hypothetical protein 138822 4268209 Mlg_0123 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_740968.1 137818 D 187272 CDS YP_740969.1 114319286 4268210 138879..139748 1 NC_008340.1 KEGG: ret:RHE_CH03218 galactosyltransferase; galactosyltransferase 139748 4268210 Mlg_0124 Alkalilimnicola ehrlichii MLHE-1 galactosyltransferase YP_740969.1 138879 D 187272 CDS YP_740970.1 114319287 4269818 140831..142432 1 NC_008340.1 PFAM: AMP-dependent synthetase and ligase; KEGG: nmu:Nmul_A2670 AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase 142432 4269818 Mlg_0125 Alkalilimnicola ehrlichii MLHE-1 AMP-dependent synthetase/ligase YP_740970.1 140831 D 187272 CDS YP_740971.1 114319288 4269819 142429..143664 1 NC_008340.1 PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: noc:Noc_1957 Orn/DAP/Arg decarboxylase 2; Orn/DAP/Arg decarboxylase 2 143664 4269819 Mlg_0126 Alkalilimnicola ehrlichii MLHE-1 Orn/DAP/Arg decarboxylase 2 YP_740971.1 142429 D 187272 CDS YP_740972.1 114319289 4269820 143882..145096 1 NC_008340.1 PFAM: protein of unknown function DUF201; KEGG: hch:HCH_02725 predicted ATP-grasp enzyme; hypothetical protein 145096 4269820 Mlg_0127 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_740972.1 143882 D 187272 CDS YP_740973.1 114319290 4269821 145227..146141 1 NC_008340.1 KEGG: noc:Noc_1959 esterase/lipase/thioesterase; esterase 146141 4269821 Mlg_0128 Alkalilimnicola ehrlichii MLHE-1 esterase YP_740973.1 145227 D 187272 CDS YP_740974.1 114319291 4269822 146358..148046 1 NC_008340.1 PFAM: transposase, IS4 family protein; KEGG: eba:ebA575 transposase, IS4 family; transposase, IS4 family protein 148046 4269822 Mlg_0129 Alkalilimnicola ehrlichii MLHE-1 transposase, IS4 family protein YP_740974.1 146358 D 187272 CDS YP_740975.1 114319292 4269823 complement(148123..148929) 1 NC_008340.1 PFAM: amidinotransferase; KEGG: mbo:Mb2350c hypothetical protein; amidinotransferase 148929 4269823 Mlg_0130 Alkalilimnicola ehrlichii MLHE-1 amidinotransferase YP_740975.1 148123 R 187272 CDS YP_740976.1 114319293 4269824 complement(148926..150548) 1 NC_008340.1 TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; KEGG: bxe:Bxe_A2036 non-ribosomal peptide synthase, amino acid adenylation domain; amino acid adenylation protein 150548 4269824 Mlg_0131 Alkalilimnicola ehrlichii MLHE-1 amino acid adenylation protein YP_740976.1 148926 R 187272 CDS YP_740977.1 114319294 4269825 complement(150706..152499) 1 NC_008340.1 PFAM: glycosyl transferase, family 2; KEGG: eba:ebA4304 glycosyl transferase, family 2; glycosyl transferase 152499 4269825 Mlg_0132 Alkalilimnicola ehrlichii MLHE-1 glycosyl transferase YP_740977.1 150706 R 187272 CDS YP_740978.1 114319295 4269826 complement(152513..152800) 1 NC_008340.1 KEGG: rfr:Rfer_0698 hypothetical protein; hypothetical protein 152800 4269826 Mlg_0133 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_740978.1 152513 R 187272 CDS YP_740979.1 114319296 4269827 152839..154695 1 NC_008340.1 PFAM: asparagine synthase; KEGG: noc:Noc_1965 asparagine synthase, glutamine-hydrolyzing; asparagine synthase 154695 4269827 Mlg_0134 Alkalilimnicola ehrlichii MLHE-1 asparagine synthase YP_740979.1 152839 D 187272 CDS YP_740980.1 114319297 4269828 complement(154692..156044) 1 NC_008340.1 KEGG: eba:ebA4317 CoA ligase, possible involved in capsular antigen synthesis (related to CapK protein); CoA ligase 156044 4269828 Mlg_0135 Alkalilimnicola ehrlichii MLHE-1 CoA ligase YP_740980.1 154692 R 187272 CDS YP_740981.1 114319298 4269829 complement(156041..157294) 1 NC_008340.1 PFAM: glycosyl transferase, group 1; KEGG: neu:NE0795 glycosyl transferases group 1; group 1 glycosyl transferase 157294 4269829 Mlg_0136 Alkalilimnicola ehrlichii MLHE-1 group 1 glycosyl transferase YP_740981.1 156041 R 187272 CDS YP_740982.1 114319299 4269830 complement(157284..158519) 1 NC_008340.1 PFAM: glycosyl transferase, group 1; KEGG: tbd:Tbd_0293 glycosyl transferase, group 1; group 1 glycosyl transferase 158519 4269830 Mlg_0137 Alkalilimnicola ehrlichii MLHE-1 group 1 glycosyl transferase YP_740982.1 157284 R 187272 CDS YP_740983.1 114319300 4269831 complement(158526..160421) 1 NC_008340.1 KEGG: tbd:Tbd_0292 asparagine synthase, glutamine-hydrolyzing; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase, class-II; asparagine synthase; asparagine synthase 160421 4269831 Mlg_0138 Alkalilimnicola ehrlichii MLHE-1 asparagine synthase YP_740983.1 158526 R 187272 CDS YP_740984.1 114319301 4269832 complement(160425..161633) 1 NC_008340.1 PFAM: glycosyl transferase, group 1; KEGG: dar:Daro_2407 glycosyl transferase, group 1; group 1 glycosyl transferase 161633 4269832 Mlg_0139 Alkalilimnicola ehrlichii MLHE-1 group 1 glycosyl transferase YP_740984.1 160425 R 187272 CDS YP_740985.1 114319302 4269833 complement(161630..163204) 1 NC_008340.1 TIGRFAM: eight transmembrane protein EpsH; KEGG: neu:NE1797 hypothetical protein; eight transmembrane protein EpsH 163204 4269833 Mlg_0140 Alkalilimnicola ehrlichii MLHE-1 eight transmembrane protein EpsH YP_740985.1 161630 R 187272 CDS YP_740986.1 114319303 4269834 complement(163194..164447) 1 NC_008340.1 PFAM: glycosyl transferase, group 1; KEGG: tbd:Tbd_0289 glycosyl transferase group 1; group 1 glycosyl transferase 164447 4269834 Mlg_0141 Alkalilimnicola ehrlichii MLHE-1 group 1 glycosyl transferase YP_740986.1 163194 R 187272 CDS YP_740987.1 114319304 4269273 complement(164452..165504) 1 NC_008340.1 KEGG: tbd:Tbd_0288 hypothetical protein; hypothetical protein 165504 4269273 Mlg_0142 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_740987.1 164452 R 187272 CDS YP_740988.1 114319305 4269274 complement(165519..166451) 1 NC_008340.1 PFAM: polysaccharide deacetylase; KEGG: tbd:Tbd_0287 polysaccharide deacetylase; polysaccharide deacetylase 166451 4269274 Mlg_0143 Alkalilimnicola ehrlichii MLHE-1 polysaccharide deacetylase YP_740988.1 165519 R 187272 CDS YP_740989.1 114319306 4269275 complement(166441..167490) 1 NC_008340.1 SMART: AAA ATPase; KEGG: tbd:Tbd_0285 ATPase; ATPase AAA 167490 4269275 Mlg_0144 Alkalilimnicola ehrlichii MLHE-1 ATPase AAA YP_740989.1 166441 R 187272 CDS YP_740990.1 114319307 4269276 complement(167494..169026) 1 NC_008340.1 KEGG: neu:NE1802 hypothetical protein; hypothetical protein 169026 4269276 Mlg_0145 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_740990.1 167494 R 187272 CDS YP_740991.1 114319308 4269277 complement(169016..169972) 1 NC_008340.1 KEGG: tbd:Tbd_0283 protein-tyrosine kinase; hypothetical protein 169972 4269277 Mlg_0146 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_740991.1 169016 R 187272 CDS YP_740992.1 114319309 4269278 complement(169987..171498) 1 NC_008340.1 PFAM: lipopolysaccharide biosynthesis; KEGG: tbd:Tbd_0282 polysaccharide chain length determinant protein; lipopolysaccharide biosynthesis 171498 4269278 Mlg_0147 Alkalilimnicola ehrlichii MLHE-1 lipopolysaccharide biosynthesis YP_740992.1 169987 R 187272 CDS YP_740993.1 114319310 4269279 171849..172421 1 NC_008340.1 PFAM: type IV pilus assembly PilZ; type IV pilus assembly PilZ 172421 4269279 Mlg_0148 Alkalilimnicola ehrlichii MLHE-1 type IV pilus assembly PilZ YP_740993.1 171849 D 187272 CDS YP_740994.1 114319311 4269280 172601..173395 1 NC_008340.1 KEGG: eba:ebA845 hypothetical protein; hypothetical protein 173395 4269280 Mlg_0149 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_740994.1 172601 D 187272 CDS YP_740995.1 114319312 4269281 173440..174195 1 NC_008340.1 KEGG: cps:CPS_4396 hypothetical protein; hypothetical protein 174195 4269281 Mlg_0150 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_740995.1 173440 D 187272 CDS YP_740996.1 114319313 4269282 174882..175784 1 NC_008340.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: eba:ebA7215 hypothetical protein; hypothetical protein 175784 4269282 Mlg_0151 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_740996.1 174882 D 187272 CDS YP_740997.1 114319314 4269283 175781..176590 1 NC_008340.1 KEGG: tbd:Tbd_0634 hypothetical protein; hypothetical protein 176590 4269283 Mlg_0152 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_740997.1 175781 D 187272 CDS YP_740998.1 114319315 4269284 176619..178007 1 NC_008340.1 KEGG: tbd:Tbd_0633 hypothetical protein; hypothetical protein 178007 4269284 Mlg_0153 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_740998.1 176619 D 187272 CDS YP_740999.1 114319316 4269285 178007..180262 1 NC_008340.1 KEGG: tbd:Tbd_0632 exporter of the RND superfamily; RND efflux transporter 180262 4269285 Mlg_0154 Alkalilimnicola ehrlichii MLHE-1 RND efflux transporter YP_740999.1 178007 D 187272 CDS YP_741000.1 114319317 4269286 180633..181610 1 NC_008340.1 KEGG: tbd:Tbd_0194 hypothetical protein; hypothetical protein 181610 4269286 Mlg_0155 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741000.1 180633 D 187272 CDS YP_741001.1 114319318 4269287 complement(182160..185027) 1 NC_008340.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: noc:Noc_1987 TPR repeat protein; TPR repeat-containing protein 185027 4269287 Mlg_0156 Alkalilimnicola ehrlichii MLHE-1 TPR repeat-containing protein YP_741001.1 182160 R 187272 CDS YP_741002.1 114319319 4269288 complement(185036..186382) 1 NC_008340.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; KEGG: noc:Noc_1997 two component transcriptional regulator, sigma-54 specific, fis family; Fis family transcriptional regulator 186382 4269288 Mlg_0157 Alkalilimnicola ehrlichii MLHE-1 Fis family transcriptional regulator YP_741002.1 185036 R 187272 CDS YP_741003.1 114319320 4269289 complement(186407..188461) 1 NC_008340.1 PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: neu:NE0377 sensory transduction histidine kinase; periplasmic sensor signal transduction histidine kinase 188461 4269289 Mlg_0158 Alkalilimnicola ehrlichii MLHE-1 periplasmic sensor signal transduction histidine kinase YP_741003.1 186407 R 187272 CDS YP_741004.1 114319321 4269290 complement(188481..189878) 1 NC_008340.1 PFAM: sugar transferase; KEGG: eba:ebA40 glycosyltransferase; undecaprenyl-phosphate galactose phosphotransferase 189878 4269290 Mlg_0159 Alkalilimnicola ehrlichii MLHE-1 undecaprenyl-phosphate galactose phosphotransferase YP_741004.1 188481 R 187272 CDS YP_741005.1 114319322 4270721 complement(189911..190537) 1 NC_008340.1 PFAM: polysaccharide export protein; KEGG: neu:NE1805 polysaccharide export protein, outer membrane; polysaccharide export protein 190537 4270721 Mlg_0160 Alkalilimnicola ehrlichii MLHE-1 polysaccharide export protein YP_741005.1 189911 R 187272 CDS YP_741006.1 114319323 4270722 191318..191956 1 NC_008340.1 PFAM: type IV pilus assembly PilZ; type IV pilus assembly PilZ 191956 4270722 Mlg_0161 Alkalilimnicola ehrlichii MLHE-1 type IV pilus assembly PilZ YP_741006.1 191318 D 187272 CDS YP_741007.1 114319324 4270723 192009..192752 1 NC_008340.1 PFAM: protein of unknown function DUF218; KEGG: eba:ebA2301 probable transmembrane protein; hypothetical protein 192752 4270723 Mlg_0162 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741007.1 192009 D 187272 CDS YP_741008.1 114319325 4270724 192774..193769 1 NC_008340.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: hch:HCH_04939 UDP-glucose 4-epimerase; UDP-galactose 4-epimerase 193769 4270724 Mlg_0163 Alkalilimnicola ehrlichii MLHE-1 UDP-galactose 4-epimerase YP_741008.1 192774 D 187272 CDS YP_741009.1 114319326 4270725 complement(193784..195097) 1 NC_008340.1 KEGG: dps:DP2951 hypothetical protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; diguanylate cyclase 195097 4270725 Mlg_0164 Alkalilimnicola ehrlichii MLHE-1 diguanylate cyclase YP_741009.1 193784 R 187272 CDS YP_741010.1 114319327 4270726 complement(195534..196418) 1 NC_008340.1 PFAM: Hsp33 protein; KEGG: mfa:Mfla_1108 HSP33 protein; heat shock protein 33 196418 4270726 Mlg_0165 Alkalilimnicola ehrlichii MLHE-1 heat shock protein 33 YP_741010.1 195534 R 187272 CDS YP_741011.1 114319328 4270727 complement(196445..197881) 1 NC_008340.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 197881 gatB 4270727 gatB Alkalilimnicola ehrlichii MLHE-1 aspartyl/glutamyl-tRNA amidotransferase subunit B YP_741011.1 196445 R 187272 CDS YP_741012.1 114319329 4270728 complement(197948..199402) 1 NC_008340.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 199402 gatA 4270728 gatA Alkalilimnicola ehrlichii MLHE-1 aspartyl/glutamyl-tRNA amidotransferase subunit A YP_741012.1 197948 R 187272 CDS YP_741013.1 114319330 4270729 complement(199448..199735) 1 NC_008340.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C 199735 gatC 4270729 gatC Alkalilimnicola ehrlichii MLHE-1 aspartyl/glutamyl-tRNA amidotransferase subunit C YP_741013.1 199448 R 187272 CDS YP_741014.1 114319331 4270730 199847..200890 1 NC_008340.1 functions in MreBCD complex in some organisms; rod shape-determining protein MreB 200890 4270730 Mlg_0169 Alkalilimnicola ehrlichii MLHE-1 rod shape-determining protein MreB YP_741014.1 199847 D 187272 CDS YP_741015.1 114319332 4270731 201035..201967 1 NC_008340.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 201967 4270731 Mlg_0170 Alkalilimnicola ehrlichii MLHE-1 rod shape-determining protein MreC YP_741015.1 201035 D 187272 CDS YP_741016.1 114319333 4270732 201964..202452 1 NC_008340.1 PFAM: Rod shape-determining protein MreD; KEGG: pae:PA4479 rod shape-determining protein MreD; rod shape-determining protein MreD 202452 4270732 Mlg_0171 Alkalilimnicola ehrlichii MLHE-1 rod shape-determining protein MreD YP_741016.1 201964 D 187272 CDS YP_741017.1 114319334 4270733 202461..204353 1 NC_008340.1 PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; KEGG: pae:PA4003 penicillin-binding protein 2; peptidoglycan glycosyltransferase 204353 4270733 Mlg_0172 Alkalilimnicola ehrlichii MLHE-1 peptidoglycan glycosyltransferase YP_741017.1 202461 D 187272 CDS YP_741018.1 114319335 4270734 204340..205491 1 NC_008340.1 TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: ppr:PBPRA2891 rod shape-determining protein RodA; rod shape-determining protein RodA 205491 4270734 Mlg_0173 Alkalilimnicola ehrlichii MLHE-1 rod shape-determining protein RodA YP_741018.1 204340 D 187272 CDS YP_741019.1 114319336 4270735 205516..206508 1 NC_008340.1 TIGRFAM: lytic murein transglycosylase B; KEGG: pfl:PFL_5450 lytic murein transglycosylase B; lytic murein transglycosylase B 206508 4270735 Mlg_0174 Alkalilimnicola ehrlichii MLHE-1 lytic murein transglycosylase B YP_741019.1 205516 D 187272 CDS YP_741020.1 114319337 4270736 206505..207479 1 NC_008340.1 TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; Sporulation domain protein; KEGG: csa:Csal_1548 rare lipoprotein A; rare lipoprotein A 207479 4270736 Mlg_0175 Alkalilimnicola ehrlichii MLHE-1 rare lipoprotein A YP_741020.1 206505 D 187272 CDS YP_741021.1 114319338 4270737 207551..208696 1 NC_008340.1 PFAM: beta-lactamase; peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: tcx:Tcr_1635 serine-type D-Ala-D-Ala carboxypeptidase; penicillin-binding protein 6 208696 4270737 Mlg_0176 Alkalilimnicola ehrlichii MLHE-1 penicillin-binding protein 6 YP_741021.1 207551 D 187272 CDS YP_741022.1 114319339 4268619 208708..209568 1 NC_008340.1 PFAM: aminotransferase, class IV; KEGG: mca:MCA0106 D-amino acid aminotransferase; branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase 209568 4268619 Mlg_0177 Alkalilimnicola ehrlichii MLHE-1 branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase YP_741022.1 208708 D 187272 CDS YP_741023.1 114319340 4268620 209570..209848 1 NC_008340.1 PFAM: protein of unknown function DUF493; KEGG: mfa:Mfla_2499 protein of unknown function DUF493; hypothetical protein 209848 4268620 Mlg_0178 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741023.1 209570 D 187272 CDS YP_741024.1 114319341 4268621 210292..210939 1 NC_008340.1 lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein; lipoate-protein ligase B 210939 lipB 4268621 lipB Alkalilimnicola ehrlichii MLHE-1 lipoate-protein ligase B YP_741024.1 210292 D 187272 CDS YP_741025.1 114319342 4268622 211123..211725 1 NC_008340.1 PFAM: HupE/UreJ protein; KEGG: ret:RHE_PB00145 hypothetical protein; HupE/UreJ protein 211725 4268622 Mlg_0180 Alkalilimnicola ehrlichii MLHE-1 HupE/UreJ protein YP_741025.1 211123 D 187272 CDS YP_741026.1 114319343 4268623 211736..212617 1 NC_008340.1 PFAM: Urease accessory protein UreD; KEGG: reu:Reut_A0991 urease accessory protein UreD; urease accessory protein UreD 212617 4268623 Mlg_0181 Alkalilimnicola ehrlichii MLHE-1 urease accessory protein UreD YP_741026.1 211736 D 187272 CDS YP_741027.1 114319344 4268624 212628..212930 1 NC_008340.1 UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter; urease subunit gamma 212930 ureA 4268624 ureA Alkalilimnicola ehrlichii MLHE-1 urease subunit gamma YP_741027.1 212628 D 187272 CDS YP_741028.1 114319345 4268625 212942..213262 1 NC_008340.1 KEGG: rso:RSc2033 probable urease (beta subunit) protein; TIGRFAM: urease, beta subunit; PFAM: Urease, beta subunit; urease subunit beta 213262 4268625 Mlg_0183 Alkalilimnicola ehrlichii MLHE-1 urease subunit beta YP_741028.1 212942 D 187272 CDS YP_741029.1 114319346 4268626 213259..214965 1 NC_008340.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; urease subunit alpha 214965 ureC 4268626 ureC Alkalilimnicola ehrlichii MLHE-1 urease subunit alpha YP_741029.1 213259 D 187272 CDS YP_741030.1 114319347 4268627 215656..216147 1 NC_008340.1 involved in the assembly of the urease metallocenter; possible nickel donor; urease accessory protein UreE 216147 ureE 4268627 ureE Alkalilimnicola ehrlichii MLHE-1 urease accessory protein UreE YP_741030.1 215656 D 187272 CDS YP_741031.1 114319348 4268628 216137..216823 1 NC_008340.1 PFAM: Urease accessory protein UreF; KEGG: hch:HCH_04525 urease accessory protein UreF; urease accessory protein UreF 216823 4268628 Mlg_0186 Alkalilimnicola ehrlichii MLHE-1 urease accessory protein UreF YP_741031.1 216137 D 187272 CDS YP_741032.1 114319349 4268629 217155..217790 1 NC_008340.1 TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein, P47K; KEGG: pha:PSHAa1762 urease accessory protein; urease accessory protein UreG 217790 4268629 Mlg_0187 Alkalilimnicola ehrlichii MLHE-1 urease accessory protein UreG YP_741032.1 217155 D 187272 CDS YP_741033.1 114319350 4268630 217984..219318 1 NC_008340.1 KEGG: ppu:PP4841 branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein; branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein 219318 4268630 Mlg_0188 Alkalilimnicola ehrlichii MLHE-1 branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein YP_741033.1 217984 D 187272 CDS YP_741034.1 114319351 4268631 219441..221144 1 NC_008340.1 PFAM: inner-membrane translocator; KEGG: dar:Daro_1437 inner-membrane translocator; inner-membrane translocator 221144 4268631 Mlg_0189 Alkalilimnicola ehrlichii MLHE-1 inner-membrane translocator YP_741034.1 219441 D 187272 CDS YP_741035.1 114319352 4268632 221155..222249 1 NC_008340.1 PFAM: inner-membrane translocator; KEGG: pst:PSPTO4887 branched-chain amino acid ABC transporter, permease; inner-membrane translocator 222249 4268632 Mlg_0190 Alkalilimnicola ehrlichii MLHE-1 inner-membrane translocator YP_741035.1 221155 D 187272 CDS YP_741036.1 114319353 4268633 222246..223088 1 NC_008340.1 PFAM: ABC transporter related; KEGG: csa:Csal_2310 ABC transporter related; ABC transporter-like protein 223088 4268633 Mlg_0191 Alkalilimnicola ehrlichii MLHE-1 ABC transporter-like protein YP_741036.1 222246 D 187272 CDS YP_741037.1 114319354 4268634 223090..223779 1 NC_008340.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: csa:Csal_2309 ABC transporter related; ABC transporter-like protein 223779 4268634 Mlg_0192 Alkalilimnicola ehrlichii MLHE-1 ABC transporter-like protein YP_741037.1 223090 D 187272 CDS YP_741038.1 114319355 4268635 223944..225221 1 NC_008340.1 PFAM: major facilitator superfamily MFS_1; KEGG: gme:Gmet_0333 major facilitator superfamily MFS_1; major facilitator transporter 225221 4268635 Mlg_0193 Alkalilimnicola ehrlichii MLHE-1 major facilitator transporter YP_741038.1 223944 D 187272 CDS YP_741039.1 114319356 4268636 complement(225270..226286) 1 NC_008340.1 TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: csa:Csal_2408 TRAP transporter solute receptor, TAXI family; TRAP transporter solute receptor TAXI family protein 226286 4268636 Mlg_0194 Alkalilimnicola ehrlichii MLHE-1 TRAP transporter solute receptor TAXI family protein YP_741039.1 225270 R 187272 CDS YP_741040.1 114319357 4269641 complement(226766..227773) 1 NC_008340.1 PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: cya:CYA_0261 hypothetical protein; succinylglutamate desuccinylase/aspartoacylase 227773 4269641 Mlg_0195 Alkalilimnicola ehrlichii MLHE-1 succinylglutamate desuccinylase/aspartoacylase YP_741040.1 226766 R 187272 CDS YP_741041.1 114319358 4269642 complement(227793..229226) 1 NC_008340.1 KEGG: noc:Noc_2286 hypothetical protein; hypothetical protein 229226 4269642 Mlg_0196 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741041.1 227793 R 187272 CDS YP_741042.1 114319359 4269643 complement(229266..229937) 1 NC_008340.1 PFAM: Nucleotidyl transferase; KEGG: ppu:PP0406 nucleotidyltransferase; nucleotidyl transferase 229937 4269643 Mlg_0197 Alkalilimnicola ehrlichii MLHE-1 nucleotidyl transferase YP_741042.1 229266 R 187272 CDS YP_741043.1 114319360 4269644 complement(229934..230944) 1 NC_008340.1 PFAM: aminoglycoside phosphotransferase; KEGG: pfl:PFL_5645 conserved hypothetical protein; aminoglycoside phosphotransferase 230944 4269644 Mlg_0198 Alkalilimnicola ehrlichii MLHE-1 aminoglycoside phosphotransferase YP_741043.1 229934 R 187272 CDS YP_741044.1 114319361 4269645 231092..233365 1 NC_008340.1 PFAM: OstA family protein; Organic solvent tolerance protein; KEGG: noc:Noc_1724 organic solvent tolerance protein; organic solvent tolerance protein 233365 4269645 Mlg_0199 Alkalilimnicola ehrlichii MLHE-1 organic solvent tolerance protein YP_741044.1 231092 D 187272 CDS YP_741045.1 114319362 4269646 233386..234687 1 NC_008340.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: noc:Noc_1723 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 234687 4269646 Mlg_0200 Alkalilimnicola ehrlichii MLHE-1 PpiC-type peptidyl-prolyl cis-trans isomerase YP_741045.1 233386 D 187272 CDS YP_741046.1 114319363 4269647 234684..235679 1 NC_008340.1 KEGG: tbd:Tbd_2339 4-hydroxythreonine-4-phosphate dehydrogenase PdxA; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; 4-hydroxythreonine-4-phosphate dehydrogenase 235679 4269647 Mlg_0201 Alkalilimnicola ehrlichii MLHE-1 4-hydroxythreonine-4-phosphate dehydrogenase YP_741046.1 234684 D 187272 CDS YP_741047.1 114319364 4269648 complement(235690..235929) 1 NC_008340.1 PFAM: thiamineS protein; KEGG: aci:ACIAD1905 hypothetical protein; sulfur transfer protein ThiS 235929 4269648 Mlg_0202 Alkalilimnicola ehrlichii MLHE-1 sulfur transfer protein ThiS YP_741047.1 235690 R 187272 CDS YP_741048.1 114319365 4269649 complement(235946..237244) 1 NC_008340.1 PFAM: major facilitator superfamily MFS_1; KEGG: dar:Daro_3345 major facilitator superfamily MFS_1; major facilitator transporter 237244 4269649 Mlg_0203 Alkalilimnicola ehrlichii MLHE-1 major facilitator transporter YP_741048.1 235946 R 187272 CDS YP_741049.1 114319366 4269650 complement(237308..238369) 1 NC_008340.1 PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: csa:Csal_1199 succinylglutamate desuccinylase/aspartoacylase; succinylglutamate desuccinylase/aspartoacylase 238369 4269650 Mlg_0204 Alkalilimnicola ehrlichii MLHE-1 succinylglutamate desuccinylase/aspartoacylase YP_741049.1 237308 R 187272 CDS YP_741050.1 114319367 4269651 complement(238372..238902) 1 NC_008340.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: pae:PA0066 hypothetical protein; hexapaptide repeat-containing transferase 238902 4269651 Mlg_0205 Alkalilimnicola ehrlichii MLHE-1 hexapaptide repeat-containing transferase YP_741050.1 238372 R 187272 CDS YP_741051.1 114319368 4269652 complement(238965..239849) 1 NC_008340.1 PFAM: UspA domain protein; KEGG: mbo:Mb2051c hypothetical protein; UspA domain-containing protein 239849 4269652 Mlg_0206 Alkalilimnicola ehrlichii MLHE-1 UspA domain-containing protein YP_741051.1 238965 R 187272 CDS YP_741052.1 114319369 4269653 complement(239974..240360) 1 NC_008340.1 hypothetical protein 240360 4269653 Mlg_0207 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741052.1 239974 R 187272 CDS YP_741053.1 114319370 4269654 complement(240519..241094) 1 NC_008340.1 PFAM: regulatory protein, TetR; KEGG: bur:Bcep18194_B0251 transcriptional regulator, TetR family; TetR family transcriptional regulator 241094 4269654 Mlg_0208 Alkalilimnicola ehrlichii MLHE-1 TetR family transcriptional regulator YP_741053.1 240519 R 187272 CDS YP_741054.1 114319371 4269655 complement(241222..242469) 1 NC_008340.1 TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: csa:Csal_3112 diaminopimelate decarboxylase; diaminopimelate decarboxylase 242469 4269655 Mlg_0209 Alkalilimnicola ehrlichii MLHE-1 diaminopimelate decarboxylase YP_741054.1 241222 R 187272 CDS YP_741055.1 114319372 4269656 complement(242493..242615) 1 NC_008340.1 hypothetical protein 242615 4269656 Mlg_0210 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741055.1 242493 R 187272 CDS YP_741056.1 114319373 4269657 242763..243443 1 NC_008340.1 PFAM: phospholipase/Carboxylesterase; KEGG: pol:Bpro_3402 carboxylesterase; carboxylesterase 243443 4269657 Mlg_0211 Alkalilimnicola ehrlichii MLHE-1 carboxylesterase YP_741056.1 242763 D 187272 CDS YP_741057.1 114319374 4268912 complement(243457..243951) 1 NC_008340.1 PFAM: peptidylprolyl isomerase, FKBP-type; KEGG: tde:TDE1925 peptidyl-prolyl cis-trans isomerase, FKBP-type; FKBP-type peptidylprolyl isomerase 243951 4268912 Mlg_0212 Alkalilimnicola ehrlichii MLHE-1 FKBP-type peptidylprolyl isomerase YP_741057.1 243457 R 187272 CDS YP_741058.1 114319375 4268913 complement(244529..245431) 1 NC_008340.1 PFAM: cytoplasmic chaperone TorD family protein; KEGG: cch:Cag_0951 hypothetical protein; cytoplasmic chaperone TorD family protein 245431 4268913 Mlg_0213 Alkalilimnicola ehrlichii MLHE-1 cytoplasmic chaperone TorD family protein YP_741058.1 244529 R 187272 CDS YP_741059.1 114319376 4268914 complement(245773..246966) 1 NC_008340.1 PFAM: Polysulphide reductase, NrfD; KEGG: wsu:WS0707 molybdopterin oxidoreductase, membrane subunit; polysulfide reductase NrfD 246966 4268914 Mlg_0214 Alkalilimnicola ehrlichii MLHE-1 polysulfide reductase NrfD YP_741059.1 245773 R 187272 CDS YP_741060.1 114319377 4268915 complement(246981..247730) 1 NC_008340.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: dvu:DVU0693 molybdopterin oxidoreductase, iron-sulfur cluster-binding subunit; 4Fe-4S ferredoxin 247730 4268915 Mlg_0215 Alkalilimnicola ehrlichii MLHE-1 4Fe-4S ferredoxin YP_741060.1 246981 R 187272 CDS YP_741061.1 114319378 4268916 complement(247756..250269) 1 NC_008340.1 TIGRFAM: Twin-arginine translocation pathway signal; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: dsy:DSY4131 anaerobic dehydrogenase; molybdopterin oxidoreductase 250269 4268916 Mlg_0216 Alkalilimnicola ehrlichii MLHE-1 molybdopterin oxidoreductase YP_741061.1 247756 R 187272 CDS YP_741062.1 114319379 4268917 complement(250266..251552) 1 NC_008340.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: sth:STH228 polyferredoxin; 4Fe-4S ferredoxin 251552 4268917 Mlg_0217 Alkalilimnicola ehrlichii MLHE-1 4Fe-4S ferredoxin YP_741062.1 250266 R 187272 CDS YP_741063.1 114319380 4268918 251788..252687 1 NC_008340.1 TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: dar:Daro_2602 phosphonate-binding periplasmic protein; phosphonate ABC transporter, periplasmic phosphonate-binding protein 252687 4268918 Mlg_0218 Alkalilimnicola ehrlichii MLHE-1 phosphonate ABC transporter, periplasmic phosphonate-binding protein YP_741063.1 251788 D 187272 CDS YP_741064.1 114319381 4268919 252684..254150 1 NC_008340.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: dar:Daro_2601 ATP-binding region, ATPase-like:histidine kinase, HAMP region:histidine kinase A, N-terminal; periplasmic sensor signal transduction histidine kinase 254150 4268919 Mlg_0219 Alkalilimnicola ehrlichii MLHE-1 periplasmic sensor signal transduction histidine kinase YP_741064.1 252684 D 187272 CDS YP_741065.1 114319382 4268920 254147..255481 1 NC_008340.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: eba:ebA6441 acetoacetate metabolism regulatory protein AtoC; Fis family transcriptional regulator 255481 4268920 Mlg_0220 Alkalilimnicola ehrlichii MLHE-1 Fis family transcriptional regulator YP_741065.1 254147 D 187272 CDS YP_741066.1 114319383 4268921 255604..256749 1 NC_008340.1 catalyzes the reversible formation of D-erythrose 4-phosphate and D-fructose 6-phosphate from sedoheptulose 7-phosphate and D-glyceraldehyde 3-phosphate; transaldolase 256749 4268921 Mlg_0221 Alkalilimnicola ehrlichii MLHE-1 transaldolase YP_741066.1 255604 D 187272 CDS YP_741067.1 114319384 4268922 256746..257132 1 NC_008340.1 protein associated with Co2+ and Mg2+ efflux; ApaG 257132 apaG 4268922 apaG Alkalilimnicola ehrlichii MLHE-1 ApaG YP_741067.1 256746 D 187272 CDS YP_741068.1 114319385 4268923 257180..258019 1 NC_008340.1 hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP; diadenosine tetraphosphatase 258019 apaH 4268923 apaH Alkalilimnicola ehrlichii MLHE-1 diadenosine tetraphosphatase YP_741068.1 257180 D 187272 CDS YP_741069.1 114319386 4268924 complement(258038..258598) 1 NC_008340.1 PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; KEGG: noc:Noc_0866 N-acetylmuramoyl-L-alanine amidase, family 2; N-acetyl-anhydromuranmyl-L-alanine amidase 258598 4268924 Mlg_0224 Alkalilimnicola ehrlichii MLHE-1 N-acetyl-anhydromuranmyl-L-alanine amidase YP_741069.1 258038 R 187272 CDS YP_741070.1 114319387 4268925 258662..260755 1 NC_008340.1 PFAM: protein of unknown function DUF255; KEGG: noc:Noc_2549 protein of unknown function DUF255; hypothetical protein 260755 4268925 Mlg_0225 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741070.1 258662 D 187272 CDS YP_741071.1 114319388 4268926 260842..261330 1 NC_008340.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: mag:amb1318 predicted transcriptional regulator; BadM/Rrf2 family transcriptional regulator 261330 4268926 Mlg_0226 Alkalilimnicola ehrlichii MLHE-1 BadM/Rrf2 family transcriptional regulator YP_741071.1 260842 D 187272 CDS YP_741072.1 114319389 4268927 complement(261316..262488) 1 NC_008340.1 PFAM: NnrS family protein; KEGG: tbd:Tbd_1409 uncharacterized protein involved in response to NO; K07234 uncharacterized protein involved in response to NO; NnrS family protein 262488 4268927 Mlg_0227 Alkalilimnicola ehrlichii MLHE-1 NnrS family protein YP_741072.1 261316 R 187272 CDS YP_741073.1 114319390 4268928 262798..263793 1 NC_008340.1 PFAM: cobalamin synthesis protein, P47K; cobalamin synthesis CobW domain protein; KEGG: rba:RB13094 conserved hypothetical protein- cobalamin synthesis protein CobW; cobalamin synthesis protein, P47K 263793 4268928 Mlg_0228 Alkalilimnicola ehrlichii MLHE-1 cobalamin synthesis protein, P47K YP_741073.1 262798 D 187272 CDS YP_741074.1 114319391 4268929 complement(263894..264193) 1 NC_008340.1 TIGRFAM: regulatory protein, FmdB family; KEGG: sde:Sde_0912 hypothetical protein; FmdB family regulatory protein 264193 4268929 Mlg_0229 Alkalilimnicola ehrlichii MLHE-1 FmdB family regulatory protein YP_741074.1 263894 R 187272 CDS YP_741075.1 114319392 4270857 complement(264419..264967) 1 NC_008340.1 PFAM: OmpA domain protein transmembrane region-containing protein; KEGG: par:Psyc_2129 possible OmpA family protein; OmpA domain-containing protein 264967 4270857 Mlg_0230 Alkalilimnicola ehrlichii MLHE-1 OmpA domain-containing protein YP_741075.1 264419 R 187272 CDS YP_741076.1 114319393 4270858 265122..265328 1 NC_008340.1 KEGG: cvi:CV1996 hypothetical protein; hypothetical protein 265328 4270858 Mlg_0231 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741076.1 265122 D 187272 CDS YP_741077.1 114319394 4270859 265325..266521 1 NC_008340.1 TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; KEGG: mca:MCA1754 monooxygenase, FAD-binding; UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase 266521 4270859 Mlg_0232 Alkalilimnicola ehrlichii MLHE-1 UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase YP_741077.1 265325 D 187272 CDS YP_741078.1 114319395 4270860 266658..267050 1 NC_008340.1 KEGG: cte:CT2131 hypothetical protein; hypothetical protein 267050 4270860 Mlg_0233 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741078.1 266658 D 187272 CDS YP_741079.1 114319396 4270861 complement(267142..267813) 1 NC_008340.1 KEGG: reu:Reut_A1445 cell divisionFtsK/SpoIIIE; hypothetical protein 267813 4270861 Mlg_0234 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741079.1 267142 R 187272 CDS YP_741080.1 114319397 4270862 complement(267857..269518) 1 NC_008340.1 PFAM: ferredoxin-dependent glutamate synthase; KEGG: bbr:BB1970 hypothetical protein; ferredoxin-dependent glutamate synthase 269518 4270862 Mlg_0235 Alkalilimnicola ehrlichii MLHE-1 ferredoxin-dependent glutamate synthase YP_741080.1 267857 R 187272 CDS YP_741081.1 114319398 4270863 complement(269554..270135) 1 NC_008340.1 KEGG: vvy:VV0792 hypothetical protein; hypothetical protein 270135 4270863 Mlg_0236 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741081.1 269554 R 187272 CDS YP_741082.1 114319399 4270864 complement(270284..270595) 1 NC_008340.1 KEGG: cne:CNK02440 hypothetical protein; hypothetical protein 270595 4270864 Mlg_0237 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741082.1 270284 R 187272 CDS YP_741083.1 114319400 4270865 complement(270695..271120) 1 NC_008340.1 PFAM: DoxX family protein; KEGG: bja:bll6552 hypothetical protein; DoxX family protein 271120 4270865 Mlg_0238 Alkalilimnicola ehrlichii MLHE-1 DoxX family protein YP_741083.1 270695 R 187272 CDS YP_741084.1 114319401 4270866 complement(271350..273839) 1 NC_008340.1 PFAM: Tubulin-tyrosine ligase; KEGG: cfa:488525 similar to Tubulin tyrosine ligase-like protein 4; tubulin-tyrosine ligase 273839 4270866 Mlg_0239 Alkalilimnicola ehrlichii MLHE-1 tubulin-tyrosine ligase YP_741084.1 271350 R 187272 CDS YP_741085.1 114319402 4270868 complement(274467..275303) 1 NC_008340.1 KEGG: xac:XAC3140 hypothetical protein; hypothetical protein 275303 4270868 Mlg_0240 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741085.1 274467 R 187272 CDS YP_741086.1 114319403 4270869 complement(275300..275854) 1 NC_008340.1 PFAM: OmpA/MotB domain protein; KEGG: noc:Noc_0146 OmpA/MotB; OmpA/MotB domain-containing protein 275854 4270869 Mlg_0241 Alkalilimnicola ehrlichii MLHE-1 OmpA/MotB domain-containing protein YP_741086.1 275300 R 187272 CDS YP_741087.1 114319404 4270870 complement(275919..277205) 1 NC_008340.1 forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB 277205 tolB 4270870 tolB Alkalilimnicola ehrlichii MLHE-1 translocation protein TolB YP_741087.1 275919 R 187272 CDS YP_741088.1 114319405 4270871 complement(277223..278224) 1 NC_008340.1 TIGRFAM: TonB family protein; PFAM: TolA family protein; KEGG: noc:Noc_0144 TonB-like; TonB family protein 278224 4270871 Mlg_0243 Alkalilimnicola ehrlichii MLHE-1 TonB family protein YP_741088.1 277223 R 187272 CDS YP_741089.1 114319406 4270872 complement(278226..278675) 1 NC_008340.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: ilo:IL1082 biopolymer transport protein; biopolymer transport protein ExbD/TolR 278675 4270872 Mlg_0244 Alkalilimnicola ehrlichii MLHE-1 biopolymer transport protein ExbD/TolR YP_741089.1 278226 R 187272 CDS YP_741090.1 114319407 4268722 complement(278688..279395) 1 NC_008340.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: mca:MCA1226 TolQ protein; MotA/TolQ/ExbB proton channel 279395 4268722 Mlg_0245 Alkalilimnicola ehrlichii MLHE-1 MotA/TolQ/ExbB proton channel YP_741090.1 278688 R 187272 CDS YP_741091.1 114319408 4268723 complement(279764..282094) 1 NC_008340.1 Phosphate acetyltransferase; NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme 282094 4268723 Mlg_0246 Alkalilimnicola ehrlichii MLHE-1 malic enzyme YP_741091.1 279764 R 187272 CDS YP_741092.1 114319409 4268724 complement(282362..282646) 1 NC_008340.1 hypothetical protein 282646 4268724 Mlg_0247 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741092.1 282362 R 187272 CDS YP_741093.1 114319410 4268725 283255..284214 1 NC_008340.1 TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: vpa:VP1251 thioredoxin reductase; thioredoxin reductase 284214 4268725 Mlg_0248 Alkalilimnicola ehrlichii MLHE-1 thioredoxin reductase YP_741093.1 283255 D 187272 CDS YP_741094.1 114319411 4268726 284503..285000 1 NC_008340.1 PFAM: Fimbrial protein pilin; KEGG: pae:PA4525 type 4 fimbrial precursor PilA; fimbrial protein pilin 285000 4268726 Mlg_0249 Alkalilimnicola ehrlichii MLHE-1 fimbrial protein pilin YP_741094.1 284503 D 187272 CDS YP_741095.1 114319412 4268727 complement(285166..285579) 1 NC_008340.1 PFAM: DNA polymerase, beta domain protein region; KEGG: mta:Moth_0178 DNA polymerase, beta-like region; DNA polymerase subunit beta 285579 4268727 Mlg_0250 Alkalilimnicola ehrlichii MLHE-1 DNA polymerase subunit beta YP_741095.1 285166 R 187272 CDS YP_741096.1 114319413 4268728 285586..285939 1 NC_008340.1 KEGG: lpp:lpp0203 hypothetical protein; hypothetical protein 285939 4268728 Mlg_0251 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741096.1 285586 D 187272 CDS YP_741097.1 114319414 4268729 285949..286386 1 NC_008340.1 PFAM: Fimbrial protein pilin; KEGG: xcb:XC_1058 pilin; fimbrial protein pilin 286386 4268729 Mlg_0252 Alkalilimnicola ehrlichii MLHE-1 fimbrial protein pilin YP_741097.1 285949 D 187272 CDS YP_741098.1 114319415 4268730 286695..287201 1 NC_008340.1 KEGG: neu:NE1751 type-4 fimbrial pilin related signal peptide protein; type-4 fimbrial pilin related signal peptide protein 287201 4268730 Mlg_0253 Alkalilimnicola ehrlichii MLHE-1 type-4 fimbrial pilin related signal peptide protein YP_741098.1 286695 D 187272 CDS YP_741099.1 114319416 4268731 287245..287667 1 NC_008340.1 KEGG: csa:Csal_0486 methylation; pilus assembly protein 287667 4268731 Mlg_0254 Alkalilimnicola ehrlichii MLHE-1 pilus assembly protein YP_741099.1 287245 D 187272 CDS YP_741100.1 114319417 4268732 287676..288356 1 NC_008340.1 TIGRFAM: Prepilin-type cleavage/methylation-like; KEGG: csa:Csal_0491 Tfp pilus assembly protein PilW-like protein; prepilin-type cleavage/methylation-like protein 288356 4268732 Mlg_0255 Alkalilimnicola ehrlichii MLHE-1 prepilin-type cleavage/methylation-like protein YP_741100.1 287676 D 187272 CDS YP_741101.1 114319418 4268733 288421..289653 1 NC_008340.1 KEGG: mtu:Rv3512 PE-PGRS family protein; hypothetical protein 289653 4268733 Mlg_0256 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741101.1 288421 D 187272 CDS YP_741102.1 114319419 4268734 complement(289856..290305) 1 NC_008340.1 KEGG: psb:Psyr_4853 hypothetical protein; hypothetical protein 290305 4268734 Mlg_0257 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741102.1 289856 R 187272 CDS YP_741103.1 114319420 4268735 complement(290398..291753) 1 NC_008340.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; KEGG: hch:HCH_05925 sigma 54-dependent transcriptional activator containing CheY-like receiver domain; Fis family transcriptional regulator 291753 4268735 Mlg_0258 Alkalilimnicola ehrlichii MLHE-1 Fis family transcriptional regulator YP_741103.1 290398 R 187272 CDS YP_741104.1 114319421 4268736 complement(291875..292213) 1 NC_008340.1 hypothetical protein 292213 4268736 Mlg_0259 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741104.1 291875 R 187272 CDS YP_741105.1 114319422 4268737 complement(292213..292872) 1 NC_008340.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 292872 pyrE 4268737 pyrE Alkalilimnicola ehrlichii MLHE-1 orotate phosphoribosyltransferase YP_741105.1 292213 R 187272 CDS YP_741106.1 114319423 4268738 complement(292878..295526) 1 NC_008340.1 catalyzes the formation of oxaloacetate from phosphoenolpyruvate; phosphoenolpyruvate carboxylase 295526 4268738 Mlg_0261 Alkalilimnicola ehrlichii MLHE-1 phosphoenolpyruvate carboxylase YP_741106.1 292878 R 187272 CDS YP_741107.1 114319424 4268739 complement(296153..297913) 1 NC_008340.1 TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: CBS domain containing protein; isocitrate/isopropylmalate dehydrogenase; KEGG: pae:PA2623 isocitrate dehydrogenase; isocitrate dehydrogenase, NADP-dependent 297913 4268739 Mlg_0262 Alkalilimnicola ehrlichii MLHE-1 isocitrate dehydrogenase, NADP-dependent YP_741107.1 296153 R 187272 CDS YP_741108.1 114319425 4270481 complement(298188..299054) 1 NC_008340.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: pfo:Pfl_2625 hypothetical protein; Sel1 domain-containing protein 299054 4270481 Mlg_0263 Alkalilimnicola ehrlichii MLHE-1 Sel1 domain-containing protein YP_741108.1 298188 R 187272 CDS YP_741109.1 114319426 4270482 complement(299109..300740) 1 NC_008340.1 KEGG: pfo:Pfl_2629 hypothetical protein; hypothetical protein 300740 4270482 Mlg_0264 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741109.1 299109 R 187272 CDS YP_741110.1 114319427 4270483 complement(300745..301806) 1 NC_008340.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: pfo:Pfl_2625 hypothetical protein; Sel1 domain-containing protein 301806 4270483 Mlg_0265 Alkalilimnicola ehrlichii MLHE-1 Sel1 domain-containing protein YP_741110.1 300745 R 187272 CDS YP_741111.1 114319428 4270484 complement(301817..305119) 1 NC_008340.1 KEGG: pfo:Pfl_2629 hypothetical protein; hypothetical protein 305119 4270484 Mlg_0266 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741111.1 301817 R 187272 CDS YP_741112.1 114319429 4270485 complement(305374..306198) 1 NC_008340.1 KEGG: noc:Noc_1721 16S rRNA dimethylase; TIGRFAM: dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; dimethyladenosine transferase 306198 4270485 Mlg_0267 Alkalilimnicola ehrlichii MLHE-1 dimethyladenosine transferase YP_741112.1 305374 R 187272 CDS YP_741113.1 114319430 4270486 306279..306920 1 NC_008340.1 PFAM: protein of unknown function DUF502; KEGG: pca:Pcar_2706 hypothetical protein; hypothetical protein 306920 4270486 Mlg_0268 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741113.1 306279 D 187272 CDS YP_741114.1 114319431 4270487 307186..309873 1 NC_008340.1 E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1 309873 aceE 4270487 aceE Alkalilimnicola ehrlichii MLHE-1 pyruvate dehydrogenase subunit E1 YP_741114.1 307186 D 187272 CDS YP_741115.1 114319432 4270488 309952..311649 1 NC_008340.1 KEGG: xcb:XC_3691 dihydrolipoamide acetyltranferase; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 311649 4270488 Mlg_0270 Alkalilimnicola ehrlichii MLHE-1 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase YP_741115.1 309952 D 187272 CDS YP_741116.1 114319433 4270489 311669..313450 1 NC_008340.1 TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: biotin/lipoyl attachment domain-containing protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: nmu:Nmul_A0515 dihydrolipoamide dehydrogenase; dihydrolipoamide dehydrogenase 313450 4270489 Mlg_0271 Alkalilimnicola ehrlichii MLHE-1 dihydrolipoamide dehydrogenase YP_741116.1 311669 D 187272 CDS YP_741117.1 114319434 4270490 complement(313963..314850) 1 NC_008340.1 TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; Methyltransferase type 11; KEGG: xoo:XOO3644 protoporphyrinogen oxidase; HemK family modification methylase 314850 4270490 Mlg_0272 Alkalilimnicola ehrlichii MLHE-1 HemK family modification methylase YP_741117.1 313963 R 187272 CDS YP_741118.1 114319435 4270491 complement(314847..315122) 1 NC_008340.1 PFAM: protein of unknown function DUF343; KEGG: xcb:XC_1612 hypothetical protein; hypothetical protein 315122 4270491 Mlg_0273 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741118.1 314847 R 187272 CDS YP_741119.1 114319436 4270492 315307..316554 1 NC_008340.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 316554 clpX 4270492 clpX Alkalilimnicola ehrlichii MLHE-1 ATP-dependent protease ATP-binding subunit ClpX YP_741119.1 315307 D 187272 CDS YP_741120.1 114319437 4270493 316674..317750 1 NC_008340.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 317750 4270493 Mlg_0275 Alkalilimnicola ehrlichii MLHE-1 phospho-2-dehydro-3-deoxyheptonate aldolase YP_741120.1 316674 D 187272 CDS YP_741121.1 114319438 4270494 317884..318315 1 NC_008340.1 TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger, DksA/TraR C4-type; KEGG: hch:HCH_06256 DnaK suppressor protein; TraR/DksA family transcriptional regulator 318315 4270494 Mlg_0276 Alkalilimnicola ehrlichii MLHE-1 TraR/DksA family transcriptional regulator YP_741121.1 317884 D 187272 CDS YP_741122.1 114319439 4270495 318437..319192 1 NC_008340.1 PFAM: metallophosphoesterase; Calcineurin phosphoesterase C-terminal domain protein; KEGG: pae:PA4969 Icc protein; metallophosphoesterase 319192 4270495 Mlg_0277 Alkalilimnicola ehrlichii MLHE-1 metallophosphoesterase YP_741122.1 318437 D 187272 CDS YP_741123.1 114319440 4270496 complement(319199..320284) 1 NC_008340.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 320284 prfA 4270496 prfA Alkalilimnicola ehrlichii MLHE-1 peptide chain release factor 1 YP_741123.1 319199 R 187272 CDS YP_741124.1 114319441 4270497 complement(320211..321551) 1 NC_008340.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 321551 hemA 4270497 hemA Alkalilimnicola ehrlichii MLHE-1 glutamyl-tRNA reductase YP_741124.1 320211 R 187272 CDS YP_741125.1 114319442 4269309 321692..323446 1 NC_008340.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mca:MCA1053 TPR domain protein; hypothetical protein 323446 4269309 Mlg_0280 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741125.1 321692 D 187272 CDS YP_741126.1 114319443 4269310 323443..324045 1 NC_008340.1 PFAM: outer membrane lipoprotein LolB; KEGG: csa:Csal_1526 outer membrane lipoprotein LolB; outer membrane lipoprotein LolB 324045 4269310 Mlg_0281 Alkalilimnicola ehrlichii MLHE-1 outer membrane lipoprotein LolB YP_741126.1 323443 D 187272 CDS YP_741127.1 114319444 4269311 324042..324917 1 NC_008340.1 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 324917 ipk 4269311 ipk Alkalilimnicola ehrlichii MLHE-1 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_741127.1 324042 D 187272 CDS YP_741128.1 114319445 4269313 325079..326035 1 NC_008340.1 KEGG: mca:MCA1056 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; ribose-phosphate pyrophosphokinase 326035 4269313 Mlg_0283 Alkalilimnicola ehrlichii MLHE-1 ribose-phosphate pyrophosphokinase YP_741128.1 325079 D 187272 CDS YP_741129.1 114319446 4269314 326135..326779 1 NC_008340.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25 326779 4269314 Mlg_0284 Alkalilimnicola ehrlichii MLHE-1 50S ribosomal protein L25 YP_741129.1 326135 D 187272 CDS YP_741130.1 114319447 4269315 326812..327405 1 NC_008340.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 327405 4269315 Mlg_0285 Alkalilimnicola ehrlichii MLHE-1 peptidyl-tRNA hydrolase YP_741130.1 326812 D 187272 CDS YP_741131.1 114319448 4269316 327417..328508 1 NC_008340.1 TIGRFAM: GTP-binding protein YchF; PFAM: GTP-binding protein, HSR1-related; Protein of unknown function DUF933; KEGG: noc:Noc_0517 GTP-binding protein, HSR1-related; GTP-binding protein YchF 328508 4269316 Mlg_0286 Alkalilimnicola ehrlichii MLHE-1 GTP-binding protein YchF YP_741131.1 327417 D 187272 CDS YP_741132.1 114319449 4269317 complement(328505..329368) 1 NC_008340.1 KEGG: noc:Noc_1326 sterol desaturase-related protein; sterol desaturase-like protein 329368 4269317 Mlg_0287 Alkalilimnicola ehrlichii MLHE-1 sterol desaturase-like protein YP_741132.1 328505 R 187272 CDS YP_741133.1 114319450 4269318 329454..329687 1 NC_008340.1 KEGG: sil:SPO0665 SlyX protein; SlyX protein 329687 4269318 Mlg_0288 Alkalilimnicola ehrlichii MLHE-1 SlyX protein YP_741133.1 329454 D 187272 CDS YP_741134.1 114319451 4269319 329892..331235 1 NC_008340.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase; KEGG: mca:MCA2487 UDP-glucose 6-dehydrogenase; UDP-glucose 6-dehydrogenase 331235 4269319 Mlg_0289 Alkalilimnicola ehrlichii MLHE-1 UDP-glucose 6-dehydrogenase YP_741134.1 329892 D 187272 CDS YP_741135.1 114319452 4269320 331243..332904 1 NC_008340.1 PFAM: phosphoglucose isomerase (PGI); KEGG: pca:Pcar_2367 glucose-6-phosphate isomerase; glucose-6-phosphate isomerase 332904 4269320 Mlg_0290 Alkalilimnicola ehrlichii MLHE-1 glucose-6-phosphate isomerase YP_741135.1 331243 D 187272 CDS YP_741136.1 114319453 4269321 complement(332901..333773) 1 NC_008340.1 PFAM: protein of unknown function DUF815; KEGG: nmu:Nmul_A1008 protein of unknown function DUF815; hypothetical protein 333773 4269321 Mlg_0291 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741136.1 332901 R 187272 CDS YP_741137.1 114319454 4269322 335185..335898 1 NC_008340.1 KEGG: pae:PA0504 dethiobiotin synthase; TIGRFAM: dethiobiotin synthase; PFAM: Cobyrinic acid a,c-diamide synthase; dethiobiotin synthase 335898 4269322 Mlg_0292 Alkalilimnicola ehrlichii MLHE-1 dethiobiotin synthase YP_741137.1 335185 D 187272 CDS YP_741138.1 114319455 4269323 336105..337040 1 NC_008340.1 PFAM: cytochrome c oxidase, subunit II; cytochrome C oxidase subunit II, transmembrane region; KEGG: mca:MCA0879 cytochrome c oxidase, subunit II; cytochrome c oxidase, subunit II 337040 4269323 Mlg_0293 Alkalilimnicola ehrlichii MLHE-1 cytochrome c oxidase, subunit II YP_741138.1 336105 D 187272 CDS YP_741139.1 114319456 4269324 337041..338621 1 NC_008340.1 PFAM: cytochrome c oxidase, subunit I; KEGG: pha:PSHAa2871 cytochrome c oxidase, subunit I; cytochrome-c oxidase 338621 4269324 Mlg_0294 Alkalilimnicola ehrlichii MLHE-1 cytochrome-c oxidase YP_741139.1 337041 D 187272 CDS YP_741140.1 114319457 4269325 338766..339308 1 NC_008340.1 PFAM: cytochrome c oxidase assembly protein CtaG/Cox11; KEGG: noc:Noc_3045 cytochrome c oxidase assembly protein CtaG/Cox11; cytochrome c oxidase assembly protein CtaG/Cox11 339308 4269325 Mlg_0295 Alkalilimnicola ehrlichii MLHE-1 cytochrome c oxidase assembly protein CtaG/Cox11 YP_741140.1 338766 D 187272 CDS YP_741141.1 114319458 4270756 339340..340200 1 NC_008340.1 PFAM: cytochrome c oxidase, subunit III; KEGG: xcb:XC_3901 cytochrome c oxidase subunit III; cytochrome c oxidase, subunit III 340200 4270756 Mlg_0296 Alkalilimnicola ehrlichii MLHE-1 cytochrome c oxidase, subunit III YP_741141.1 339340 D 187272 CDS YP_741142.1 114319459 4270757 complement(340225..340452) 1 NC_008340.1 KEGG: xoo:XOO4136 hypothetical protein; hypothetical protein 340452 4270757 Mlg_0297 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741142.1 340225 R 187272 CDS YP_741143.1 114319460 4270758 340504..341271 1 NC_008340.1 KEGG: pae:PA0110 hypothetical protein; hypothetical protein 341271 4270758 Mlg_0298 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741143.1 340504 D 187272 CDS YP_741144.1 114319461 4270759 341258..341884 1 NC_008340.1 KEGG: dar:Daro_1464 probable transmembrane protein; transmembrane protein 341884 4270759 Mlg_0299 Alkalilimnicola ehrlichii MLHE-1 transmembrane protein YP_741144.1 341258 D 187272 CDS YP_741145.1 114319462 4270760 341884..342969 1 NC_008340.1 PFAM: cytochrome oxidase assembly; KEGG: noc:Noc_3040 cytochrome oxidase assembly; cytochrome oxidase assembly 342969 4270760 Mlg_0300 Alkalilimnicola ehrlichii MLHE-1 cytochrome oxidase assembly YP_741145.1 341884 D 187272 CDS YP_741146.1 114319463 4270761 342980..343909 1 NC_008340.1 TIGRFAM: protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase; KEGG: mca:MCA0062 protoheme IX farnesyl transferase; protoheme IX farnesyltransferase 343909 4270761 Mlg_0301 Alkalilimnicola ehrlichii MLHE-1 protoheme IX farnesyltransferase YP_741146.1 342980 D 187272 CDS YP_741147.1 114319464 4270762 complement(343926..344324) 1 NC_008340.1 KEGG: pca:Pcar_0180 hypothetical protein; hypothetical protein 344324 4270762 Mlg_0302 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741147.1 343926 R 187272 CDS YP_741148.1 114319465 4270763 complement(344331..344927) 1 NC_008340.1 KEGG: ade:Adeh_2674 hypothetical protein; hypothetical protein 344927 4270763 Mlg_0303 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741148.1 344331 R 187272 CDS YP_741149.1 114319466 4270764 complement(344914..345204) 1 NC_008340.1 hypothetical protein 345204 4270764 Mlg_0304 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741149.1 344914 R 187272 CDS YP_741150.1 114319467 4270765 complement(345278..346165) 1 NC_008340.1 PFAM: VacJ family lipoprotein; KEGG: mfa:Mfla_0585 VacJ-like lipoprotein; VacJ family lipoprotein 346165 4270765 Mlg_0305 Alkalilimnicola ehrlichii MLHE-1 VacJ family lipoprotein YP_741150.1 345278 R 187272 CDS YP_741151.1 114319468 4270766 complement(346195..347262) 1 NC_008340.1 KEGG: xcb:XC_0831 hypothetical protein; periplasmic ligand-binding sensor protein 347262 4270766 Mlg_0306 Alkalilimnicola ehrlichii MLHE-1 periplasmic ligand-binding sensor protein YP_741151.1 346195 R 187272 CDS YP_741152.1 114319469 4270767 complement(347252..348691) 1 NC_008340.1 PFAM: FAD linked oxidase domain protein; KEGG: mag:amb3713 FAD/FMN-containing dehydrogenase; FAD linked oxidase domain-containing protein 348691 4270767 Mlg_0307 Alkalilimnicola ehrlichii MLHE-1 FAD linked oxidase domain-containing protein YP_741152.1 347252 R 187272 CDS YP_741153.1 114319470 4270768 complement(348705..350138) 1 NC_008340.1 PFAM: phospholipase D/Transphosphatidylase; KEGG: dde:Dde_0590 phospholipase D/transphosphatidylase; cardiolipin synthetase 2 350138 4270768 Mlg_0308 Alkalilimnicola ehrlichii MLHE-1 cardiolipin synthetase 2 YP_741153.1 348705 R 187272 CDS YP_741154.1 114319471 4270769 350247..351905 1 NC_008340.1 TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; KEGG: cps:CPS_4027 transporter, BCCT family; choline/carnitine/betaine transporter 351905 4270769 Mlg_0309 Alkalilimnicola ehrlichii MLHE-1 choline/carnitine/betaine transporter YP_741154.1 350247 D 187272 CDS YP_741155.1 114319472 4270770 352037..352468 1 NC_008340.1 PFAM: ferric-uptake regulator; KEGG: mag:amb4306 Fe2+/Zn2+ uptake regulation protein; ferric uptake regulator family protein 352468 4270770 Mlg_0310 Alkalilimnicola ehrlichii MLHE-1 ferric uptake regulator family protein YP_741155.1 352037 D 187272 CDS YP_741156.1 114319473 4270771 352574..353398 1 NC_008340.1 PFAM: protein of unknown function DUF88; KEGG: dps:DP0904 hypothetical protein; hypothetical protein 353398 4270771 Mlg_0311 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741156.1 352574 D 187272 CDS YP_741157.1 114319474 4270772 complement(353409..354365) 1 NC_008340.1 KEGG: bha:BH1795 arsenical pump-driving ATPase; TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase; arsenite-activated ATPase ArsA 354365 4270772 Mlg_0312 Alkalilimnicola ehrlichii MLHE-1 arsenite-activated ATPase ArsA YP_741157.1 353409 R 187272 CDS YP_741158.1 114319475 4270056 complement(354375..354650) 1 NC_008340.1 KEGG: bha:BH1794 hypothetical protein; hypothetical protein 354650 4270056 Mlg_0313 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741158.1 354375 R 187272 CDS YP_741159.1 114319476 4270057 complement(354702..356462) 1 NC_008340.1 PFAM: carbon starvation protein CstA; KEGG: csa:Csal_2003 carbon starvation protein CstA; carbon starvation protein CstA 356462 4270057 Mlg_0314 Alkalilimnicola ehrlichii MLHE-1 carbon starvation protein CstA YP_741159.1 354702 R 187272 CDS YP_741160.1 114319477 4270058 356712..357152 1 NC_008340.1 PFAM: UspA domain protein; KEGG: tfu:Tfu_1412 hypothetical protein; UspA domain-containing protein 357152 4270058 Mlg_0315 Alkalilimnicola ehrlichii MLHE-1 UspA domain-containing protein YP_741160.1 356712 D 187272 CDS YP_741161.1 114319478 4270059 complement(357201..358139) 1 NC_008340.1 PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: mca:MCA0398 oxidoreductase, Gfo/Idh/MocA family; oxidoreductase domain-containing protein 358139 4270059 Mlg_0316 Alkalilimnicola ehrlichii MLHE-1 oxidoreductase domain-containing protein YP_741161.1 357201 R 187272 CDS YP_741162.1 114319479 4270060 complement(358217..359467) 1 NC_008340.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rru:Rru_A1910 cyclopropane-fatty-acyl-phospholipid synthase; cyclopropane-fatty-acyl-phospholipid synthase 359467 4270060 Mlg_0317 Alkalilimnicola ehrlichii MLHE-1 cyclopropane-fatty-acyl-phospholipid synthase YP_741162.1 358217 R 187272 CDS YP_741163.1 114319480 4270061 359603..360466 1 NC_008340.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: csa:Csal_3035 thioredoxin-related; thioredoxin 360466 4270061 Mlg_0318 Alkalilimnicola ehrlichii MLHE-1 thioredoxin YP_741163.1 359603 D 187272 CDS YP_741164.1 114319481 4270062 360591..361379 1 NC_008340.1 PFAM: cyclic nucleotide-binding; regulatory protein, Crp; KEGG: sbo:SBO_1727 Fnr; Crp/Fnr family transcriptional regulator 361379 4270062 Mlg_0319 Alkalilimnicola ehrlichii MLHE-1 Crp/Fnr family transcriptional regulator YP_741164.1 360591 D 187272 CDS YP_741165.1 114319482 4270063 complement(361454..361906) 1 NC_008340.1 PFAM: heat shock protein Hsp20; KEGG: mca:MCA2532 heat shock protein, HSP20 family; heat shock protein Hsp20 361906 4270063 Mlg_0320 Alkalilimnicola ehrlichii MLHE-1 heat shock protein Hsp20 YP_741165.1 361454 R 187272 CDS YP_741166.1 114319483 4270064 362065..362901 1 NC_008340.1 hypothetical protein 362901 4270064 Mlg_0321 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741166.1 362065 D 187272 CDS YP_741167.1 114319484 4270065 362917..363783 1 NC_008340.1 PFAM: Ion transport protein; KEGG: jan:Jann_0087 ion transport protein; Ion transport protein 363783 4270065 Mlg_0322 Alkalilimnicola ehrlichii MLHE-1 Ion transport protein YP_741167.1 362917 D 187272 CDS YP_741168.1 114319485 4270066 363899..364099 1 NC_008340.1 PFAM: Heavy metal transport/detoxification protein; KEGG: tth:TTC1356 heavy metal binding protein; heavy metal transport/detoxification protein 364099 4270066 Mlg_0323 Alkalilimnicola ehrlichii MLHE-1 heavy metal transport/detoxification protein YP_741168.1 363899 D 187272 CDS YP_741169.1 114319486 4270067 364099..364389 1 NC_008340.1 PFAM: protein of unknown function DUF156; KEGG: ttj:TTHA1719 copper homeostasis operon regulatory protein; hypothetical protein 364389 4270067 Mlg_0324 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741169.1 364099 D 187272 CDS YP_741170.1 114319487 4270068 364411..366876 1 NC_008340.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: dge:Dgeo_0089 ATPase, P type cation/copper-transporter; heavy metal translocating P-type ATPase 366876 4270068 Mlg_0325 Alkalilimnicola ehrlichii MLHE-1 heavy metal translocating P-type ATPase YP_741170.1 364411 D 187272 CDS YP_741171.1 114319488 4270069 complement(366873..367625) 1 NC_008340.1 PFAM: protein of unknown function DUF1365; KEGG: rpb:RPB_2905 protein of unknown function DUF1365; hypothetical protein 367625 4270069 Mlg_0326 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741171.1 366873 R 187272 CDS YP_741172.1 114319489 4269890 complement(373701..375056) 1 NC_008340.1 catalyzes the formation of L-tryptophan from indole and L-serine; tryptophan synthase subunit beta 375056 4269890 Mlg_0327 Alkalilimnicola ehrlichii MLHE-1 tryptophan synthase subunit beta YP_741172.1 373701 R 187272 CDS YP_741173.1 114319490 4269891 complement(375146..375820) 1 NC_008340.1 PFAM: OmpA/MotB domain protein; 17 kDa surface antigen; KEGG: sme:SMc00354 hypothetical protein; OmpA/MotB domain-containing protein 375820 4269891 Mlg_0328 Alkalilimnicola ehrlichii MLHE-1 OmpA/MotB domain-containing protein YP_741173.1 375146 R 187272 CDS YP_741174.1 114319491 4269892 complement(375845..376012) 1 NC_008340.1 hypothetical protein 376012 4269892 Mlg_0329 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741174.1 375845 R 187272 CDS YP_741175.1 114319492 4269893 376136..376378 1 NC_008340.1 PFAM: SirA family protein; KEGG: nmu:Nmul_A1011 SirA-like; SirA family protein 376378 4269893 Mlg_0330 Alkalilimnicola ehrlichii MLHE-1 SirA family protein YP_741175.1 376136 D 187272 CDS YP_741176.1 114319493 4269894 complement(376431..376796) 1 NC_008340.1 KEGG: csa:Csal_2464 hypothetical protein; hypothetical protein 376796 4269894 Mlg_0331 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741176.1 376431 R 187272 CDS YP_741177.1 114319494 4269895 complement(376939..377937) 1 NC_008340.1 SohB; periplasmic protein; member of the peptidase S49 family; periplasmic protease 377937 4269895 Mlg_0332 Alkalilimnicola ehrlichii MLHE-1 periplasmic protease YP_741177.1 376939 R 187272 CDS YP_741178.1 114319495 4269896 378002..378286 1 NC_008340.1 hypothetical protein 378286 4269896 Mlg_0333 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741178.1 378002 D 187272 CDS YP_741179.1 114319496 4269897 378386..379504 1 NC_008340.1 PFAM: AFG1-family ATPase; KEGG: hch:HCH_05300 predicted ATPase; AFG1 family ATPase 379504 4269897 Mlg_0334 Alkalilimnicola ehrlichii MLHE-1 AFG1 family ATPase YP_741179.1 378386 D 187272 CDS YP_741180.1 114319497 4269898 complement(379529..380452) 1 NC_008340.1 PFAM: histone deacetylase superfamily; KEGG: mca:MCA2486 histone deacetylase/AcuC/AphA family protein; histone deacetylase superfamily protein 380452 4269898 Mlg_0335 Alkalilimnicola ehrlichii MLHE-1 histone deacetylase superfamily protein YP_741180.1 379529 R 187272 CDS YP_741181.1 114319498 4269899 complement(380472..381179) 1 NC_008340.1 PFAM: Spermine synthase; KEGG: sat:SYN_01347 spermidine synthase; spermine synthase 381179 4269899 Mlg_0336 Alkalilimnicola ehrlichii MLHE-1 spermine synthase YP_741181.1 380472 R 187272 CDS YP_741182.1 114319499 4269900 complement(381291..381899) 1 NC_008340.1 TIGRFAM: methionine biosynthesis protein MetW; PFAM: Methionine biosynthesis MetW; Methyltransferase type 11; Methyltransferase type 12; KEGG: hch:HCH_06360 methionine biosynthesis protein MetW; methionine biosynthesis protein MetW 381899 4269900 Mlg_0337 Alkalilimnicola ehrlichii MLHE-1 methionine biosynthesis protein MetW YP_741182.1 381291 R 187272 CDS YP_741183.1 114319500 4268326 complement(381896..383050) 1 NC_008340.1 Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine; homoserine O-acetyltransferase 383050 metX 4268326 metX Alkalilimnicola ehrlichii MLHE-1 homoserine O-acetyltransferase YP_741183.1 381896 R 187272 CDS YP_741184.1 114319501 4268327 complement(383130..383708) 1 NC_008340.1 PFAM: protein of unknown function YGGT; KEGG: mca:MCA1534 YGGT family protein; hypothetical protein 383708 4268327 Mlg_0339 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741184.1 383130 R 187272 CDS YP_741185.1 114319502 4268328 complement(383708..384535) 1 NC_008340.1 KEGG: noc:Noc_3002 delta 1-pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; pyrroline-5-carboxylate reductase 384535 4268328 Mlg_0340 Alkalilimnicola ehrlichii MLHE-1 pyrroline-5-carboxylate reductase YP_741185.1 383708 R 187272 CDS YP_741186.1 114319503 4268329 complement(384532..385245) 1 NC_008340.1 TIGRFAM: Protein of unknown function UPF0001; PFAM: alanine racemase domain protein; KEGG: bpm:BURPS1710b_3346 conserved hypothetical protein TIGR00044; hypothetical protein 385245 4268329 Mlg_0341 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741186.1 384532 R 187272 CDS YP_741187.1 114319504 4268330 385353..386390 1 NC_008340.1 KEGG: noc:Noc_3004 pilus retraction protein PilT; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: AAA ATPase; twitching motility protein 386390 4268330 Mlg_0342 Alkalilimnicola ehrlichii MLHE-1 twitching motility protein YP_741187.1 385353 D 187272 CDS YP_741188.1 114319505 4268331 386451..387608 1 NC_008340.1 TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: pae:PA0396 twitching motility protein PilU; twitching motility protein 387608 4268331 Mlg_0343 Alkalilimnicola ehrlichii MLHE-1 twitching motility protein YP_741188.1 386451 D 187272 CDS YP_741189.1 114319506 4268332 complement(387868..388584) 1 NC_008340.1 KEGG: noc:Noc_0363 dihydroorotate dehydrogenase electron transfer subunit; dihydroorotate dehydrogenase electron transfer subunit 388584 4268332 Mlg_0344 Alkalilimnicola ehrlichii MLHE-1 dihydroorotate dehydrogenase electron transfer subunit YP_741189.1 387868 R 187272 CDS YP_741190.1 114319507 4268333 complement(388568..389848) 1 NC_008340.1 TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; KEGG: mca:MCA2332 dihydroorotase; dihydroorotase 389848 4268333 Mlg_0345 Alkalilimnicola ehrlichii MLHE-1 dihydroorotase YP_741190.1 388568 R 187272 CDS YP_741191.1 114319508 4268334 complement(389845..390810) 1 NC_008340.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase 390810 pyrB 4268334 pyrB Alkalilimnicola ehrlichii MLHE-1 aspartate carbamoyltransferase YP_741191.1 389845 R 187272 CDS YP_741192.1 114319509 4268335 complement(390807..391316) 1 NC_008340.1 regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity; bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase 391316 4268335 Mlg_0347 Alkalilimnicola ehrlichii MLHE-1 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase YP_741192.1 390807 R 187272 CDS YP_741193.1 114319510 4268336 complement(391313..391747) 1 NC_008340.1 PFAM: Holliday junction resolvase YqgF; SMART: Resolvase, RNase H domain protein fold; KEGG: eca:ECA3926 Holliday junction resolvase; Holliday junction resolvase YqgF 391747 4268336 Mlg_0348 Alkalilimnicola ehrlichii MLHE-1 Holliday junction resolvase YqgF YP_741193.1 391313 R 187272 CDS YP_741194.1 114319511 4268337 complement(391740..392315) 1 NC_008340.1 PFAM: protein of unknown function DUF179; KEGG: noc:Noc_0368 protein of unknown function DUF179; hypothetical protein 392315 4268337 Mlg_0349 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741194.1 391740 R 187272 CDS YP_741195.1 114319512 4268338 complement(392368..393255) 1 NC_008340.1 TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: xac:XAC3104 TonB protein; TonB family protein 393255 4268338 Mlg_0350 Alkalilimnicola ehrlichii MLHE-1 TonB family protein YP_741195.1 392368 R 187272 CDS YP_741196.1 114319513 4268339 complement(393252..393797) 1 NC_008340.1 PFAM: Heptaprenyl diphosphate synthase component I; KEGG: dar:Daro_0068 heptaprenyl diphosphate synthase component I; heptaprenyl diphosphate synthase component I 393797 4268339 Mlg_0351 Alkalilimnicola ehrlichii MLHE-1 heptaprenyl diphosphate synthase component I YP_741196.1 393252 R 187272 CDS YP_741197.1 114319514 4268340 complement(393800..394162) 1 NC_008340.1 KEGG: tbd:Tbd_0528 hypothetical protein; hypothetical protein 394162 4268340 Mlg_0352 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741197.1 393800 R 187272 CDS YP_741198.1 114319515 4268341 complement(394159..395211) 1 NC_008340.1 PFAM: ApbE family lipoprotein; KEGG: rsp:RSP_3188 ApbE family protein; ApbE family lipoprotein 395211 4268341 Mlg_0353 Alkalilimnicola ehrlichii MLHE-1 ApbE family lipoprotein YP_741198.1 394159 R 187272 CDS YP_741199.1 114319516 4268342 complement(395208..396152) 1 NC_008340.1 KEGG: hch:HCH_00547 glutathione synthetase; TIGRFAM: glutathione synthetase; PFAM: protein of unknown function DUF201; glutathione synthetase domain protein; glutathione synthetase, ATP-binding; RimK domain protein ATP-grasp; glutathione synthase 396152 4268342 Mlg_0354 Alkalilimnicola ehrlichii MLHE-1 glutathione synthase YP_741199.1 395208 R 187272 CDS YP_741200.1 114319517 4268343 396299..396784 1 NC_008340.1 PFAM: response regulator receiver; KEGG: xcb:XC_1183 pilus protein; response regulator receiver protein 396784 4268343 Mlg_0355 Alkalilimnicola ehrlichii MLHE-1 response regulator receiver protein YP_741200.1 396299 D 187272 CDS YP_741201.1 114319518 4268947 396828..397193 1 NC_008340.1 PFAM: response regulator receiver; KEGG: pae:PA0409 twitching motility protein PilH; response regulator receiver protein 397193 4268947 Mlg_0356 Alkalilimnicola ehrlichii MLHE-1 response regulator receiver protein YP_741201.1 396828 D 187272 CDS YP_741202.1 114319519 4268948 397199..397750 1 NC_008340.1 PFAM: CheW domain protein; KEGG: ppu:PP4990 type IV pili signal transduction protein PilI; chemotaxis protein CheW 397750 4268948 Mlg_0357 Alkalilimnicola ehrlichii MLHE-1 chemotaxis protein CheW YP_741202.1 397199 D 187272 CDS YP_741203.1 114319520 4268949 397779..399461 1 NC_008340.1 PFAM: chemotaxis sensory transducer; KEGG: pae:PA0411 twitching motility protein PilJ; methyl-accepting chemotaxis sensory transducer 399461 4268949 Mlg_0358 Alkalilimnicola ehrlichii MLHE-1 methyl-accepting chemotaxis sensory transducer YP_741203.1 397779 D 187272 CDS YP_741204.1 114319521 4268950 399454..404958 1 NC_008340.1 PFAM: response regulator receiver; CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; KEGG: noc:Noc_0126 CheA signal transduction histidine kinase; CheA signal transduction histidine kinases 404958 4268950 Mlg_0359 Alkalilimnicola ehrlichii MLHE-1 CheA signal transduction histidine kinases YP_741204.1 399454 D 187272 CDS YP_741205.1 114319522 4268951 404955..405515 1 NC_008340.1 KEGG: xcb:XC_1190 chemosensory pili system protein ChpC; chemosensory pili system protein ChpC 405515 4268951 Mlg_0360 Alkalilimnicola ehrlichii MLHE-1 chemosensory pili system protein ChpC YP_741205.1 404955 D 187272 CDS YP_741206.1 114319523 4268952 complement(405545..406291) 1 NC_008340.1 PFAM: protein of unknown function DUF558; KEGG: tbd:Tbd_0155 hypothetical protein; hypothetical protein 406291 4268952 Mlg_0361 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741206.1 405545 R 187272 CDS YP_741207.1 114319524 4268953 complement(406288..407637) 1 NC_008340.1 catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 407637 4268953 Mlg_0362 Alkalilimnicola ehrlichii MLHE-1 adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_741207.1 406288 R 187272 CDS YP_741208.1 114319525 4268954 complement(408187..409521) 1 NC_008340.1 catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis; N-acetylglutamate synthase 409521 4268954 Mlg_0363 Alkalilimnicola ehrlichii MLHE-1 N-acetylglutamate synthase YP_741208.1 408187 R 187272 CDS YP_741209.1 114319526 4268955 complement(409526..410692) 1 NC_008340.1 catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis; acetylornithine deacetylase 410692 4268955 Mlg_0364 Alkalilimnicola ehrlichii MLHE-1 acetylornithine deacetylase YP_741209.1 409526 R 187272 CDS YP_741210.1 114319527 4268956 complement(410724..411383) 1 NC_008340.1 PFAM: protein of unknown function DUF1058; SH3, type 3 domain protein; SMART: SH3 domain protein domain protein; KEGG: neu:NE2386 bacterial SH3 domain homologue; hypothetical protein 411383 4268956 Mlg_0365 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741210.1 410724 R 187272 CDS YP_741211.1 114319528 4268957 411612..412823 1 NC_008340.1 PFAM: RNA methylase; conserved hypothetical protein 95; methyltransferase small; KEGG: pfl:PFL_5872 conserved hypothetical protein; SAM-dependent methyltransferase 412823 4268957 Mlg_0366 Alkalilimnicola ehrlichii MLHE-1 SAM-dependent methyltransferase YP_741211.1 411612 D 187272 CDS YP_741212.1 114319529 4268958 complement(413143..414399) 1 NC_008340.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 414399 rho 4268958 rho Alkalilimnicola ehrlichii MLHE-1 transcription termination factor Rho YP_741212.1 413143 R 187272 CDS YP_741213.1 114319530 4268959 complement(414540..414866) 1 NC_008340.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: tbd:Tbd_0036 thioredoxin; thioredoxin 414866 4268959 Mlg_0368 Alkalilimnicola ehrlichii MLHE-1 thioredoxin YP_741213.1 414540 R 187272 CDS YP_741214.1 114319531 4268960 complement(415048..415734) 1 NC_008340.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: hch:HCH_00564 predicted hydrolase (HAD superfamily); HAD family hydrolase 415734 4268960 Mlg_0369 Alkalilimnicola ehrlichii MLHE-1 HAD family hydrolase YP_741214.1 415048 R 187272 CDS YP_741215.1 114319532 4268961 415782..416381 1 NC_008340.1 ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose; ADP-ribose diphosphatase NudE 416381 nudE 4268961 nudE Alkalilimnicola ehrlichii MLHE-1 ADP-ribose diphosphatase NudE YP_741215.1 415782 D 187272 CDS YP_741216.1 114319533 4268962 complement(416394..417188) 1 NC_008340.1 PFAM: thymidylate synthase; KEGG: pae:PA0342 thymidylate synthase; thymidylate synthase 417188 4268962 Mlg_0371 Alkalilimnicola ehrlichii MLHE-1 thymidylate synthase YP_741216.1 416394 R 187272 CDS YP_741217.1 114319534 4268963 complement(417267..418118) 1 NC_008340.1 KEGG: tbr:Tb927.4.5120 hypothetical protein; hypothetical protein 418118 4268963 Mlg_0372 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741217.1 417267 R 187272 CDS YP_741218.1 114319535 4268998 418391..419650 1 NC_008340.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 419650 glyA 4268998 glyA Alkalilimnicola ehrlichii MLHE-1 serine hydroxymethyltransferase YP_741218.1 418391 D 187272 CDS YP_741219.1 114319536 4268999 419660..420115 1 NC_008340.1 TIGRFAM: Ribonucleotide reductase regulator NrdR-like; PFAM: ATP-cone domain protein; KEGG: noc:Noc_2026 protein of unknown function DUF193; transcriptional regulator NrdR 420115 nrdR 4268999 nrdR Alkalilimnicola ehrlichii MLHE-1 transcriptional regulator NrdR YP_741219.1 419660 D 187272 CDS YP_741220.1 114319537 4269000 420126..421235 1 NC_008340.1 KEGG: dar:Daro_0605 riboflavin biosynthesis protein RibD:riboflavin-specific deaminase, C-terminal; TIGRFAM: riboflavin biosynthesis protein RibD; Riboflavin-specific deaminase-like; PFAM: CMP/dCMP deaminase, zinc-binding; bifunctional deaminase-reductase domain protein; diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase 421235 4269000 Mlg_0375 Alkalilimnicola ehrlichii MLHE-1 diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase YP_741220.1 420126 D 187272 CDS YP_741221.1 114319538 4269001 421267..421932 1 NC_008340.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 421932 4269001 Mlg_0376 Alkalilimnicola ehrlichii MLHE-1 riboflavin synthase subunit alpha YP_741221.1 421267 D 187272 CDS YP_741222.1 114319539 4269002 421933..423048 1 NC_008340.1 PFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; KEGG: noc:Noc_2023 GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase 423048 4269002 Mlg_0377 Alkalilimnicola ehrlichii MLHE-1 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_741222.1 421933 D 187272 CDS YP_741223.1 114319540 4269003 423061..423531 1 NC_008340.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 423531 ribH 4269003 ribH Alkalilimnicola ehrlichii MLHE-1 6,7-dimethyl-8-ribityllumazine synthase YP_741223.1 423061 D 187272 CDS YP_741224.1 114319541 4269004 423528..424064 1 NC_008340.1 TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: noc:Noc_0803 NusB antitermination factor; NusB antitermination factor 424064 4269004 Mlg_0379 Alkalilimnicola ehrlichii MLHE-1 NusB antitermination factor YP_741224.1 423528 D 187272 CDS YP_741225.1 114319542 4269005 424206..425171 1 NC_008340.1 KEGG: son:SO3464 thiamin-monophosphate kinase; TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein domain protein; thiamine-monophosphate kinase 425171 4269005 Mlg_0380 Alkalilimnicola ehrlichii MLHE-1 thiamine-monophosphate kinase YP_741225.1 424206 D 187272 CDS YP_741226.1 114319543 4269006 425209..425850 1 NC_008340.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: lma:LmjF28.2160 hypothetical protein, conserved; type 11 methyltransferase 425850 4269006 Mlg_0381 Alkalilimnicola ehrlichii MLHE-1 type 11 methyltransferase YP_741226.1 425209 D 187272 CDS YP_741227.1 114319544 4269008 complement(426494..428578) 1 NC_008340.1 TIGRFAM: integron integrase; PFAM: phage integrase; transposase IS66; KEGG: ppu:PP3985 ISPpu13, transposase Orf2; integron integrase 428578 4269008 Mlg_0383 Alkalilimnicola ehrlichii MLHE-1 integron integrase YP_741227.1 426494 R 187272 CDS YP_741228.1 114319545 4269009 429799..430680 1 NC_008340.1 KEGG: dps:DP0242 hypothetical protein; hypothetical protein 430680 4269009 Mlg_0384 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741228.1 429799 D 187272 CDS YP_741229.1 114319546 4269010 430658..431233 1 NC_008340.1 KEGG: tdn:Tmden_0946 hypothetical protein; hypothetical protein 431233 4269010 Mlg_0385 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741229.1 430658 D 187272 CDS YP_741230.1 114319547 4269011 431326..432441 1 NC_008340.1 KEGG: ilo:IL0647 hypothetical protein; hypothetical protein 432441 4269011 Mlg_0386 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741230.1 431326 D 187272 CDS YP_741231.1 114319548 4269012 complement(432605..432925) 1 NC_008340.1 hypothetical protein 432925 4269012 Mlg_0387 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741231.1 432605 R 187272 CDS YP_741232.1 114319549 4269013 433162..433671 1 NC_008340.1 KEGG: ilo:IL1489 hypothetical protein; hypothetical protein 433671 4269013 Mlg_0388 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741232.1 433162 D 187272 CDS YP_741233.1 114319550 4269014 433704..435392 1 NC_008340.1 PFAM: transposase, IS4 family protein; KEGG: eba:ebA575 transposase, IS4 family; transposase, IS4 family protein 435392 4269014 Mlg_0389 Alkalilimnicola ehrlichii MLHE-1 transposase, IS4 family protein YP_741233.1 433704 D 187272 CDS YP_741234.1 114319551 4269015 435748..436227 1 NC_008340.1 PFAM: phosphatidylglycerophosphatase A; KEGG: son:SO3463 phosphatidylglycerophosphatase A; phosphatidylglycerophosphatase 436227 4269015 Mlg_0390 Alkalilimnicola ehrlichii MLHE-1 phosphatidylglycerophosphatase YP_741234.1 435748 D 187272 CDS YP_741235.1 114319552 4269969 436231..438051 1 NC_008340.1 PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: nmu:Nmul_A0682 ABC transporter related; ABC transporter-like protein 438051 4269969 Mlg_0391 Alkalilimnicola ehrlichii MLHE-1 ABC transporter-like protein YP_741235.1 436231 D 187272 CDS YP_741236.1 114319553 4269970 complement(438141..439049) 1 NC_008340.1 PFAM: Phytanoyl-CoA dioxygenase; KEGG: bcl:ABC3489 L-proline 4-hydroxylase; phytanoyl-CoA dioxygenase 439049 4269970 Mlg_0392 Alkalilimnicola ehrlichii MLHE-1 phytanoyl-CoA dioxygenase YP_741236.1 438141 R 187272 CDS YP_741237.1 114319554 4269971 complement(439279..439620) 1 NC_008340.1 hypothetical protein 439620 4269971 Mlg_0393 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741237.1 439279 R 187272 CDS YP_741238.1 114319555 4269972 439658..441184 1 NC_008340.1 KEGG: mca:MCA1459 tRNA-i(6)A37 modification enzyme MiaB; TIGRFAM: RNA modification enzyme, MiaB family; tRNA-i(6)A37 thiotransferase enzyme MiaB; PFAM: deoxyribonuclease/rho motif-related TRAM; protein of unknown function UPF0004; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; tRNA-i(6)A37 thiotransferase MiaB 441184 4269972 Mlg_0394 Alkalilimnicola ehrlichii MLHE-1 tRNA-i(6)A37 thiotransferase MiaB YP_741238.1 439658 D 187272 CDS YP_741239.1 114319556 4269973 441303..442334 1 NC_008340.1 PFAM: PhoH family protein; KEGG: noc:Noc_0238 PhoH-like protein; PhoH family protein 442334 4269973 Mlg_0395 Alkalilimnicola ehrlichii MLHE-1 PhoH family protein YP_741239.1 441303 D 187272 CDS YP_741240.1 114319557 4269974 442315..442815 1 NC_008340.1 PFAM: protein of unknown function UPF0054; KEGG: xac:XAC2464 hypothetical protein; hypothetical protein 442815 4269974 Mlg_0396 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741240.1 442315 D 187272 CDS YP_741241.1 114319558 4269975 442897..443772 1 NC_008340.1 PFAM: CBS domain containing protein; transporter-associated region; KEGG: noc:Noc_0240 Mg2+ and Co2+ transporter CorC; CBS domain-containing protein 443772 4269975 Mlg_0397 Alkalilimnicola ehrlichii MLHE-1 CBS domain-containing protein YP_741241.1 442897 D 187272 CDS YP_741242.1 114319559 4269976 443775..445292 1 NC_008340.1 TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: noc:Noc_0241 apolipoprotein N-acyltransferase; apolipoprotein N-acyltransferase 445292 4269976 Mlg_0398 Alkalilimnicola ehrlichii MLHE-1 apolipoprotein N-acyltransferase YP_741242.1 443775 D 187272 CDS YP_741243.1 114319560 4269977 complement(445336..445887) 1 NC_008340.1 PFAM: protein of unknown function DUF1451; KEGG: noc:Noc_2600 conserved hypothetical protein YbeL; hypothetical protein 445887 4269977 Mlg_0399 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741243.1 445336 R 187272 CDS YP_741244.1 114319561 4269978 446060..448654 1 NC_008340.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 448654 leuS 4269978 leuS Alkalilimnicola ehrlichii MLHE-1 leucyl-tRNA synthetase YP_741244.1 446060 D 187272 CDS YP_741245.1 114319562 4269979 448712..449251 1 NC_008340.1 KEGG: dar:Daro_0543 rare lipoprotein B; rare lipoprotein B-like protein 449251 4269979 Mlg_0401 Alkalilimnicola ehrlichii MLHE-1 rare lipoprotein B-like protein YP_741245.1 448712 D 187272 CDS YP_741246.1 114319563 4269980 449254..450270 1 NC_008340.1 KEGG: pst:PSPTO4814 DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta; DNA polymerase III subunit delta 450270 4269980 Mlg_0402 Alkalilimnicola ehrlichii MLHE-1 DNA polymerase III subunit delta YP_741246.1 449254 D 187272 CDS YP_741247.1 114319564 4269981 450344..451606 1 NC_008340.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 451606 proA 4269981 proA Alkalilimnicola ehrlichii MLHE-1 gamma-glutamyl phosphate reductase YP_741247.1 450344 D 187272 CDS YP_741248.1 114319565 4269982 451614..452288 1 NC_008340.1 KEGG: noc:Noc_2661 nicotinic acid mononucleotide adenyltransferase; TIGRFAM: cytidyltransferase-related domain; nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase; nicotinate-nucleotide adenylyltransferase 452288 4269982 Mlg_0404 Alkalilimnicola ehrlichii MLHE-1 nicotinate-nucleotide adenylyltransferase YP_741248.1 451614 D 187272 CDS YP_741249.1 114319566 4269983 452301..452672 1 NC_008340.1 TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: csa:Csal_1543 iojap-related protein; iojap-like protein 452672 4269983 Mlg_0405 Alkalilimnicola ehrlichii MLHE-1 iojap-like protein YP_741249.1 452301 D 187272 CDS YP_741250.1 114319567 4269984 452676..453143 1 NC_008340.1 PFAM: protein of unknown function DUF163; KEGG: hin:HI0033 hypothetical protein; hypothetical protein 453143 4269984 Mlg_0406 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741250.1 452676 D 187272 CDS YP_741251.1 114319568 4269985 453305..453790 1 NC_008340.1 TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; KEGG: pae:PA1673 hemerythrin; hypothetical protein 453790 4269985 Mlg_0407 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741251.1 453305 D 187272 CDS YP_741252.1 114319569 4269447 453830..454438 1 NC_008340.1 TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: sde:Sde_3189 inhibitor of septum formation; maf protein 454438 4269447 Mlg_0408 Alkalilimnicola ehrlichii MLHE-1 maf protein YP_741252.1 453830 D 187272 CDS YP_741253.1 114319570 4269448 454441..455919 1 NC_008340.1 TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: noc:Noc_2657 ribonuclease E and G; ribonuclease G 455919 4269448 Mlg_0409 Alkalilimnicola ehrlichii MLHE-1 ribonuclease G YP_741253.1 454441 D 187272 CDS YP_741254.1 114319571 4269449 455950..459879 1 NC_008340.1 TIGRFAM: conserved hypothetical protein; KEGG: noc:Noc_2656 conserved hypothetical protein 2099; hypothetical protein 459879 4269449 Mlg_0410 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741254.1 455950 D 187272 CDS YP_741255.1 114319572 4269450 459904..460731 1 NC_008340.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: mca:MCA0381 hydrolase, carbon-nitrogen family; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 460731 4269450 Mlg_0411 Alkalilimnicola ehrlichii MLHE-1 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_741255.1 459904 D 187272 CDS YP_741256.1 114319573 4269451 460775..462226 1 NC_008340.1 PFAM: peptidase U62, modulator of DNA gyrase; KEGG: mca:MCA0382 TldD protein; microcin-processing peptidase 2 462226 4269451 Mlg_0412 Alkalilimnicola ehrlichii MLHE-1 microcin-processing peptidase 2 YP_741256.1 460775 D 187272 CDS YP_741257.1 114319574 4269452 462504..463862 1 NC_008340.1 PFAM: peptidase U62, modulator of DNA gyrase; KEGG: mca:MCA0383 PmbA protein; microcin-processing peptidase 1 463862 4269452 Mlg_0413 Alkalilimnicola ehrlichii MLHE-1 microcin-processing peptidase 1 YP_741257.1 462504 D 187272 CDS YP_741258.1 114319575 4269453 complement(463930..464244) 1 NC_008340.1 KEGG: rfr:Rfer_2154 ribosomal subunit interface protein; ribosomal subunit interface protein 464244 4269453 Mlg_0414 Alkalilimnicola ehrlichii MLHE-1 ribosomal subunit interface protein YP_741258.1 463930 R 187272 CDS YP_741259.1 114319576 4269454 complement(464324..465589) 1 NC_008340.1 PFAM: FAD dependent oxidoreductase; KEGG: mag:amb2799 glycine/D-amino acid oxidase; D-amino acid dehydrogenase small subunit 465589 4269454 Mlg_0415 Alkalilimnicola ehrlichii MLHE-1 D-amino acid dehydrogenase small subunit YP_741259.1 464324 R 187272 CDS YP_741260.1 114319577 4269455 complement(465925..466653) 1 NC_008340.1 PFAM: protein of unknown function DUF81; KEGG: vfi:VF1119 hypothetical protein; hypothetical protein 466653 4269455 Mlg_0416 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741260.1 465925 R 187272 CDS YP_741261.1 114319578 4269456 complement(466704..467834) 1 NC_008340.1 PFAM: NHL repeat containing protein; glucose sorbosone dehydrogenase; KEGG: cya:CYA_2304 glucose/sorbosone dehydrogenase; glucose sorbosone dehydrogenase 467834 4269456 Mlg_0417 Alkalilimnicola ehrlichii MLHE-1 glucose sorbosone dehydrogenase YP_741261.1 466704 R 187272 CDS YP_741262.1 114319579 4269457 complement(468155..470008) 1 NC_008340.1 KEGG: pae:PA0353 dihydroxy-acid dehydratase; TIGRFAM: dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; dihydroxyacid dehydratase 470008 4269457 Mlg_0418 Alkalilimnicola ehrlichii MLHE-1 dihydroxyacid dehydratase YP_741262.1 468155 R 187272 CDS YP_741263.1 114319580 4269458 complement(470432..471001) 1 NC_008340.1 TIGRFAM: ATP--cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: mfa:Mfla_0623 hypothetical protein; ATP:cob(I)alamin adenosyltransferase 471001 4269458 Mlg_0419 Alkalilimnicola ehrlichii MLHE-1 ATP:cob(I)alamin adenosyltransferase YP_741263.1 470432 R 187272 CDS YP_741264.1 114319581 4269459 471078..471770 1 NC_008340.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: vpa:VP0112 methyltransferase-related protein; type 12 methyltransferase 471770 4269459 Mlg_0420 Alkalilimnicola ehrlichii MLHE-1 type 12 methyltransferase YP_741264.1 471078 D 187272 CDS YP_741265.1 114319582 4269460 complement(471791..472150) 1 NC_008340.1 KEGG: sil:SPO2248 DnaK suppressor protein; TraR/DksA family transcriptional regulator 472150 4269460 Mlg_0421 Alkalilimnicola ehrlichii MLHE-1 TraR/DksA family transcriptional regulator YP_741265.1 471791 R 187272 CDS YP_741266.1 114319583 4269461 472204..472737 1 NC_008340.1 PFAM: Appr-1-p processing domain protein; KEGG: sru:SRU_0547 Appr-1-p processing enzyme family protein; appr-1-p processing domain-containing protein 472737 4269461 Mlg_0422 Alkalilimnicola ehrlichii MLHE-1 appr-1-p processing domain-containing protein YP_741266.1 472204 D 187272 CDS YP_741267.1 114319584 4269462 complement(473184..473684) 1 NC_008340.1 PFAM: dihydrofolate reductase region; KEGG: bmb:BruAb1_1393 FolA, dihydrofolate reductase; dihydrofolate reductase 473684 4269462 Mlg_0423 Alkalilimnicola ehrlichii MLHE-1 dihydrofolate reductase YP_741267.1 473184 R 187272 CDS YP_741268.1 114319585 4269463 complement(473707..474429) 1 NC_008340.1 PFAM: LrgB family protein; KEGG: csa:Csal_1794 LrgB-like protein; LrgB family protein 474429 4269463 Mlg_0424 Alkalilimnicola ehrlichii MLHE-1 LrgB family protein YP_741268.1 473707 R 187272 CDS YP_741269.1 114319586 4269464 complement(474419..474769) 1 NC_008340.1 PFAM: LrgA family protein; KEGG: csa:Csal_1793 LrgA; LrgA family protein 474769 4269464 Mlg_0425 Alkalilimnicola ehrlichii MLHE-1 LrgA family protein YP_741269.1 474419 R 187272 CDS YP_741270.1 114319587 4268279 complement(474774..475469) 1 NC_008340.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: csa:Csal_2578 HAD-superfamily subfamily IB, PSPase-like protein; HAD family hydrolase 475469 4268279 Mlg_0426 Alkalilimnicola ehrlichii MLHE-1 HAD family hydrolase YP_741270.1 474774 R 187272 CDS YP_741271.1 114319588 4268280 475602..476147 1 NC_008340.1 hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase 476147 4268280 Mlg_0427 Alkalilimnicola ehrlichii MLHE-1 dinucleoside polyphosphate hydrolase YP_741271.1 475602 D 187272 CDS YP_741272.1 114319589 4268281 476165..478429 1 NC_008340.1 TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing enzyme; GAF domain protein; PEP-utilising enzyme, mobile region; PEP-utilising enzyme domain protein; KEGG: ppu:PP5145 phosphoenolpyruvate-protein phosphotransferase PtsP; phosphoenolpyruvate-protein phosphotransferase PtsP 478429 4268281 Mlg_0428 Alkalilimnicola ehrlichii MLHE-1 phosphoenolpyruvate-protein phosphotransferase PtsP YP_741272.1 476165 D 187272 CDS YP_741273.1 114319590 4268282 478509..478709 1 NC_008340.1 PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: aci:ACIAD3328 regulatory or redox component complexing with Bfr, in iron storage and mobility (Bfd); BFD/(2Fe-2S)-binding domain-containing protein 478709 4268282 Mlg_0429 Alkalilimnicola ehrlichii MLHE-1 BFD/(2Fe-2S)-binding domain-containing protein YP_741273.1 478509 D 187272 CDS YP_741274.1 114319591 4268283 478818..479282 1 NC_008340.1 TIGRFAM: bacterioferritin; PFAM: Ferritin, Dps family protein; KEGG: cvi:CV3399 bacterioferritin; bacterioferritin 479282 4268283 Mlg_0430 Alkalilimnicola ehrlichii MLHE-1 bacterioferritin YP_741274.1 478818 D 187272 CDS YP_741275.1 114319592 4268284 complement(479397..479819) 1 NC_008340.1 PFAM: conserved hypothetical protein 701; KEGG: noc:Noc_0228 conserved hypothetical protein 701; hypothetical protein 479819 4268284 Mlg_0431 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741275.1 479397 R 187272 CDS YP_741276.1 114319593 4268285 complement(479822..480331) 1 NC_008340.1 PFAM: Redoxin domain protein; KEGG: tbd:Tbd_2431 thioredoxin; redoxin domain-containing protein 480331 4268285 Mlg_0432 Alkalilimnicola ehrlichii MLHE-1 redoxin domain-containing protein YP_741276.1 479822 R 187272 CDS YP_741277.1 114319594 4268286 complement(480399..482126) 1 NC_008340.1 PFAM: Cl- channel, voltage-gated family protein; KEGG: noc:Noc_0358 Cl-channel, voltage gated; Cl- channel, voltage-gated family protein 482126 4268286 Mlg_0433 Alkalilimnicola ehrlichii MLHE-1 Cl- channel, voltage-gated family protein YP_741277.1 480399 R 187272 CDS YP_741278.1 114319595 4268287 482201..483232 1 NC_008340.1 KEGG: hch:HCH_06245 N-acetyl-gamma-glutamyl-phosphate reductase; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase, NAD - binding; Semialdehyde dehydrogenase, dimerisation region; N-acetyl-gamma-glutamyl-phosphate reductase 483232 4268287 Mlg_0434 Alkalilimnicola ehrlichii MLHE-1 N-acetyl-gamma-glutamyl-phosphate reductase YP_741278.1 482201 D 187272 CDS YP_741279.1 114319596 4268288 483341..483709 1 NC_008340.1 essential respiratory protein A; may be involved in the transfer of iron-sulfur clusters; essential for growth using oxygen or alternate electron acceptors; iron-sulfur cluster insertion protein ErpA 483709 4268288 Mlg_0435 Alkalilimnicola ehrlichii MLHE-1 iron-sulfur cluster insertion protein ErpA YP_741279.1 483341 D 187272 CDS YP_741280.1 114319597 4268289 complement(483803..484954) 1 NC_008340.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase 484954 anmK 4268289 anmK Alkalilimnicola ehrlichii MLHE-1 anhydro-N-acetylmuramic acid kinase YP_741280.1 483803 R 187272 CDS YP_741281.1 114319598 4268290 complement(484951..486492) 1 NC_008340.1 PFAM: peptidase M23B; KEGG: pae:PA0667 hypothetical protein; peptidase M23B 486492 4268290 Mlg_0437 Alkalilimnicola ehrlichii MLHE-1 peptidase M23B YP_741281.1 484951 R 187272 CDS YP_741282.1 114319599 4268291 486713..487912 1 NC_008340.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 487912 4268291 Mlg_0438 Alkalilimnicola ehrlichii MLHE-1 tyrosyl-tRNA synthetase YP_741282.1 486713 D 187272 CDS YP_741283.1 114319600 4270383 493783..495084 1 NC_008340.1 catalyzes the removal of amino acids from the N termini of peptides; aminopeptidase 2 495084 4270383 Mlg_0439 Alkalilimnicola ehrlichii MLHE-1 aminopeptidase 2 YP_741283.1 493783 D 187272 CDS YP_741284.1 114319601 4270384 495081..496091 1 NC_008340.1 TIGRFAM: biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; Helix-turn-helix, type 11 domain protein; KEGG: xcb:XC_4026 biotin acetyl-CoA-carboxylase synthetase; biotin--acetyl-CoA-carboxylase ligase 496091 4270384 Mlg_0440 Alkalilimnicola ehrlichii MLHE-1 biotin--acetyl-CoA-carboxylase ligase YP_741284.1 495081 D 187272 CDS YP_741285.1 114319602 4270385 496048..496818 1 NC_008340.1 type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase 496818 4270385 Mlg_0441 Alkalilimnicola ehrlichii MLHE-1 pantothenate kinase YP_741285.1 496048 D 187272 CDS YP_741286.1 114319603 4270386 496815..497441 1 NC_008340.1 hypothetical protein 497441 4270386 Mlg_0442 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741286.1 496815 D 187272 CDS YP_741287.1 114319604 4270388 complement(497581..499365) 1 NC_008340.1 TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class I; PFAM: alpha/beta hydrolase fold; Poly-beta-hydroxybutyrate polymerase domain protein; KEGG: mag:amb3725 poly(3-hydroxyalkanoate) synthetase; poly(R)-hydroxyalkanoic acid synthase, class I 499365 4270388 Mlg_0443 Alkalilimnicola ehrlichii MLHE-1 poly(R)-hydroxyalkanoic acid synthase, class I YP_741287.1 497581 R 187272 CDS YP_741288.1 114319605 4270791 499981..501171 1 NC_008340.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 501171 4270791 Mlg_0444 Alkalilimnicola ehrlichii MLHE-1 elongation factor Tu YP_741288.1 499981 D 187272 CDS YP_741289.1 114319606 4270793 501361..501738 1 NC_008340.1 forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 501738 secE 4270793 secE Alkalilimnicola ehrlichii MLHE-1 preprotein translocase subunit SecE YP_741289.1 501361 D 187272 CDS YP_741290.1 114319607 4270794 501742..502275 1 NC_008340.1 KEGG: noc:Noc_2336 transcription antitermination protein NusG; TIGRFAM: transcription termination/antitermination factor NusG; PFAM: transcription antitermination protein NusG; KOW domain protein; SMART: NGN domain protein; KOW (Kyrpides, Ouzounis, Woese) domain protein; transcription antitermination protein NusG 502275 4270794 Mlg_0446 Alkalilimnicola ehrlichii MLHE-1 transcription antitermination protein NusG YP_741290.1 501742 D 187272 CDS YP_741291.1 114319608 4270795 502356..502787 1 NC_008340.1 PFAM: ribosomal protein L11; KEGG: csa:Csal_0410 ribosomal protein L11; 50S ribosomal protein L17 502787 4270795 Mlg_0447 Alkalilimnicola ehrlichii MLHE-1 50S ribosomal protein L17 YP_741291.1 502356 D 187272 CDS YP_741292.1 114319609 4270796 502789..503484 1 NC_008340.1 PFAM: ribosomal protein L1; KEGG: noc:Noc_2334 ribosomal protein L1; 50S ribosomal protein L1 503484 4270796 Mlg_0448 Alkalilimnicola ehrlichii MLHE-1 50S ribosomal protein L1 YP_741292.1 502789 D 187272 CDS YP_741293.1 114319610 4270797 503768..504295 1 NC_008340.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 504295 rplJ 4270797 rplJ Alkalilimnicola ehrlichii MLHE-1 50S ribosomal protein L10 YP_741293.1 503768 D 187272 CDS YP_741294.1 114319611 4270798 504377..504754 1 NC_008340.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 504754 rplL 4270798 rplL Alkalilimnicola ehrlichii MLHE-1 50S ribosomal protein L7/L12 YP_741294.1 504377 D 187272 CDS YP_741295.1 114319612 4270799 504991..509058 1 NC_008340.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 509058 rpoB 4270799 rpoB Alkalilimnicola ehrlichii MLHE-1 DNA-directed RNA polymerase subunit beta YP_741295.1 504991 D 187272 CDS YP_741296.1 114319613 4270800 509112..513392 1 NC_008340.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 513392 4270800 Mlg_0452 Alkalilimnicola ehrlichii MLHE-1 DNA-directed RNA polymerase subunit beta' YP_741296.1 509112 D 187272 CDS YP_741297.1 114319614 4270801 513528..513902 1 NC_008340.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 513902 rpsL 4270801 rpsL Alkalilimnicola ehrlichii MLHE-1 30S ribosomal protein S12 YP_741297.1 513528 D 187272 CDS YP_741298.1 114319615 4270802 513952..514422 1 NC_008340.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 514422 4270802 Mlg_0454 Alkalilimnicola ehrlichii MLHE-1 30S ribosomal protein S7 YP_741298.1 513952 D 187272 CDS YP_741299.1 114319616 4270803 514447..516546 1 NC_008340.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 516546 4270803 Mlg_0455 Alkalilimnicola ehrlichii MLHE-1 elongation factor G YP_741299.1 514447 D 187272 CDS YP_741300.1 114319617 4270804 516615..517805 1 NC_008340.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 517805 4270804 Mlg_0456 Alkalilimnicola ehrlichii MLHE-1 elongation factor Tu YP_741300.1 516615 D 187272 CDS YP_741301.1 114319618 4270805 517810..518121 1 NC_008340.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 518121 rpsJ 4270805 rpsJ Alkalilimnicola ehrlichii MLHE-1 30S ribosomal protein S10 YP_741301.1 517810 D 187272 CDS YP_741302.1 114319619 4270392 518196..518852 1 NC_008340.1 PFAM: ribosomal protein L3; KEGG: ssn:SSO_3461 50S ribosomal subunit protein L3; 50S ribosomal protein L3P 518852 4270392 Mlg_0458 Alkalilimnicola ehrlichii MLHE-1 50S ribosomal protein L3P YP_741302.1 518196 D 187272 CDS YP_741303.1 114319620 4270393 518852..519469 1 NC_008340.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 519469 rplD 4270393 rplD Alkalilimnicola ehrlichii MLHE-1 50S ribosomal protein L4 YP_741303.1 518852 D 187272 CDS YP_741304.1 114319621 4270394 519466..519765 1 NC_008340.1 PFAM: Ribosomal protein L25/L23; KEGG: pha:PSHAa0146 50S ribosomal protein L23; 50S ribosomal protein L23 519765 4270394 Mlg_0460 Alkalilimnicola ehrlichii MLHE-1 50S ribosomal protein L23 YP_741304.1 519466 D 187272 CDS YP_741305.1 114319622 4270395 519814..520638 1 NC_008340.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 520638 rplB 4270395 rplB Alkalilimnicola ehrlichii MLHE-1 50S ribosomal protein L2 YP_741305.1 519814 D 187272 CDS YP_741306.1 114319623 4270396 520661..520933 1 NC_008340.1 TIGRFAM: ribosomal protein S19; PFAM: ribosomal protein S19/S15; KEGG: pae:PA4259 30S ribosomal protein S19; 30S ribosomal protein S19 520933 4270396 Mlg_0462 Alkalilimnicola ehrlichii MLHE-1 30S ribosomal protein S19 YP_741306.1 520661 D 187272 CDS YP_741307.1 114319624 4270397 520943..521278 1 NC_008340.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 521278 rplV 4270397 rplV Alkalilimnicola ehrlichii MLHE-1 50S ribosomal protein L22 YP_741307.1 520943 D 187272 CDS YP_741308.1 114319625 4270398 521291..521971 1 NC_008340.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 521971 rpsC 4270398 rpsC Alkalilimnicola ehrlichii MLHE-1 30S ribosomal protein S3 YP_741308.1 521291 D 187272 CDS YP_741309.1 114319626 4270399 521976..522389 1 NC_008340.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 522389 rplP 4270399 rplP Alkalilimnicola ehrlichii MLHE-1 50S ribosomal protein L16 YP_741309.1 521976 D 187272 CDS YP_741310.1 114319627 4270400 522389..522586 1 NC_008340.1 one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 522586 4270400 Mlg_0466 Alkalilimnicola ehrlichii MLHE-1 50S ribosomal protein L29 YP_741310.1 522389 D 187272 CDS YP_741311.1 114319628 4270401 522586..522849 1 NC_008340.1 PFAM: ribosomal protein S17; KEGG: ppu:PP0463 ribosomal protein S17; 30S ribosomal protein S17 522849 4270401 Mlg_0467 Alkalilimnicola ehrlichii MLHE-1 30S ribosomal protein S17 YP_741311.1 522586 D 187272 CDS YP_741312.1 114319629 4270402 522910..523278 1 NC_008340.1 TIGRFAM: ribosomal protein L14; PFAM: ribosomal protein L14b/L23e; KEGG: dar:Daro_0329 ribosomal protein L14, bacterial and organelle form; 50S ribosomal protein L14 523278 4270402 Mlg_0468 Alkalilimnicola ehrlichii MLHE-1 50S ribosomal protein L14 YP_741312.1 522910 D 187272 CDS YP_741313.1 114319630 4270403 523289..523609 1 NC_008340.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 523609 rplX 4270403 rplX Alkalilimnicola ehrlichii MLHE-1 50S ribosomal protein L24 YP_741313.1 523289 D 187272 CDS YP_741314.1 114319631 4270404 523619..524158 1 NC_008340.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 524158 rplE 4270404 rplE Alkalilimnicola ehrlichii MLHE-1 50S ribosomal protein L5 YP_741314.1 523619 D 187272 CDS YP_741315.1 114319632 4270405 524181..524486 1 NC_008340.1 PFAM: ribosomal protein S14; KEGG: csa:Csal_0434 ribosomal protein S14; 30S ribosomal protein S14 524486 4270405 Mlg_0471 Alkalilimnicola ehrlichii MLHE-1 30S ribosomal protein S14 YP_741315.1 524181 D 187272 CDS YP_741316.1 114319633 4270406 524522..524917 1 NC_008340.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 524917 rpsH 4270406 rpsH Alkalilimnicola ehrlichii MLHE-1 30S ribosomal protein S8 YP_741316.1 524522 D 187272 CDS YP_741317.1 114319634 4270407 524931..525464 1 NC_008340.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 525464 rplF 4270407 rplF Alkalilimnicola ehrlichii MLHE-1 50S ribosomal protein L6 YP_741317.1 524931 D 187272 CDS YP_741318.1 114319635 4270408 525479..525832 1 NC_008340.1 binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 525832 rplR 4270408 rplR Alkalilimnicola ehrlichii MLHE-1 50S ribosomal protein L18 YP_741318.1 525479 D 187272 CDS YP_741319.1 114319636 4270409 525848..526348 1 NC_008340.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 526348 rpsE 4270409 rpsE Alkalilimnicola ehrlichii MLHE-1 30S ribosomal protein S5 YP_741319.1 525848 D 187272 CDS YP_741320.1 114319637 4268344 526351..526539 1 NC_008340.1 PFAM: ribosomal protein L30; KEGG: tcx:Tcr_0313 ribosomal protein L30; 50S ribosomal protein L30 526539 4268344 Mlg_0476 Alkalilimnicola ehrlichii MLHE-1 50S ribosomal protein L30 YP_741320.1 526351 D 187272 CDS YP_741321.1 114319638 4268345 526541..526975 1 NC_008340.1 late assembly protein; 50S ribosomal protein L15 526975 rplO 4268345 rplO Alkalilimnicola ehrlichii MLHE-1 50S ribosomal protein L15 YP_741321.1 526541 D 187272 CDS YP_741322.1 114319639 4268346 526976..528319 1 NC_008340.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 528319 secY 4268346 secY Alkalilimnicola ehrlichii MLHE-1 preprotein translocase subunit SecY YP_741322.1 526976 D 187272 CDS YP_741323.1 114319640 4268347 528433..528546 1 NC_008340.1 PFAM: ribosomal protein L36; KEGG: ilo:IL1895 ribosomal protein L36; 50S ribosomal protein L36 528546 4268347 Mlg_0479 Alkalilimnicola ehrlichii MLHE-1 50S ribosomal protein L36 YP_741323.1 528433 D 187272 CDS YP_741324.1 114319641 4268348 528626..528985 1 NC_008340.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 528985 rpsM 4268348 rpsM Alkalilimnicola ehrlichii MLHE-1 30S ribosomal protein S13 YP_741324.1 528626 D 187272 CDS YP_741325.1 114319642 4268349 529057..529449 1 NC_008340.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 529449 4268349 Mlg_0481 Alkalilimnicola ehrlichii MLHE-1 30S ribosomal protein S11 YP_741325.1 529057 D 187272 CDS YP_741326.1 114319643 4268350 529465..530085 1 NC_008340.1 PFAM: ribosomal protein S4; RNA-binding S4 domain protein; KEGG: csa:Csal_0445 ribosomal protein S4; 30S ribosomal protein S4 530085 4268350 Mlg_0482 Alkalilimnicola ehrlichii MLHE-1 30S ribosomal protein S4 YP_741326.1 529465 D 187272 CDS YP_741327.1 114319644 4268351 530140..531135 1 NC_008340.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 531135 4268351 Mlg_0483 Alkalilimnicola ehrlichii MLHE-1 DNA-directed RNA polymerase subunit alpha YP_741327.1 530140 D 187272 CDS YP_741328.1 114319645 4268352 531173..531586 1 NC_008340.1 PFAM: ribosomal protein L17; KEGG: ilo:IL1890 ribosomal protein L17; 50S ribosomal protein L17 531586 4268352 Mlg_0484 Alkalilimnicola ehrlichii MLHE-1 50S ribosomal protein L17 YP_741328.1 531173 D 187272 CDS YP_741329.1 114319646 4268353 531666..532430 1 NC_008340.1 PFAM: protein of unknown function DUF62; KEGG: rru:Rru_A1812 protein of unknown function DUF62; hypothetical protein 532430 4268353 Mlg_0485 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741329.1 531666 D 187272 CDS YP_741330.1 114319647 4268354 532427..532672 1 NC_008340.1 KEGG: mag:amb4558 hypothetical protein; hypothetical protein 532672 4268354 Mlg_0486 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741330.1 532427 D 187272 CDS YP_741331.1 114319648 4268355 532854..533834 1 NC_008340.1 catalyzes the oxidation of malate to oxaloacetate; malate dehydrogenase 533834 4268355 Mlg_0487 Alkalilimnicola ehrlichii MLHE-1 malate dehydrogenase YP_741331.1 532854 D 187272 CDS YP_741332.1 114319649 4268356 complement(533957..534568) 1 NC_008340.1 PFAM: lipolytic enzyme, G-D-S-L family; KEGG: pca:Pcar_0430 lipase; GDSL family lipase 534568 4268356 Mlg_0488 Alkalilimnicola ehrlichii MLHE-1 GDSL family lipase YP_741332.1 533957 R 187272 CDS YP_741333.1 114319650 4268357 534659..535825 1 NC_008340.1 PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: bur:Bcep18194_B3173 tartrate dehydrogenase; 3-isopropylmalate dehydrogenase 535825 4268357 Mlg_0489 Alkalilimnicola ehrlichii MLHE-1 3-isopropylmalate dehydrogenase YP_741333.1 534659 D 187272 CDS YP_741334.1 114319651 4268358 535850..537241 1 NC_008340.1 PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: son:SO0541 metallo-beta-lactamase; beta-lactamase domain-containing protein 537241 4268358 Mlg_0490 Alkalilimnicola ehrlichii MLHE-1 beta-lactamase domain-containing protein YP_741334.1 535850 D 187272 CDS YP_741335.1 114319652 4268359 537341..538624 1 NC_008340.1 PFAM: aminotransferase class-III; KEGG: sco:SCO7034 aminotransferase (fragment); aminotransferase 538624 4268359 Mlg_0491 Alkalilimnicola ehrlichii MLHE-1 aminotransferase YP_741335.1 537341 D 187272 CDS YP_741336.1 114319653 4268360 538743..539441 1 NC_008340.1 PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: noc:Noc_0914 phosphatidylethanolamine N-methyltransferase; phosphatidyl-N-methylethanolamine N-methyltransferase/phosphatidylethanolamine N-methyltransferase 539441 4268360 Mlg_0492 Alkalilimnicola ehrlichii MLHE-1 phosphatidyl-N-methylethanolamine N-methyltransferase/phosphatidylethanolamine N-methyltransferase YP_741336.1 538743 D 187272 CDS YP_741337.1 114319654 4268429 539872..540312 1 NC_008340.1 TIGRFAM: conserved hypothetical protein; KEGG: mlo:mlr9078 hypothetical protein; hypothetical protein 540312 4268429 Mlg_0493 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741337.1 539872 D 187272 CDS YP_741338.1 114319655 4268430 540312..540794 1 NC_008340.1 KEGG: mlo:mlr9079 hypothetical protein; hypothetical protein 540794 4268430 Mlg_0494 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741338.1 540312 D 187272 CDS YP_741339.1 114319656 4268431 541599..543080 1 NC_008340.1 PFAM: outer membrane efflux protein; KEGG: bur:Bcep18194_B2765 outer membrane efflux protein; outer membrane efflux protein 543080 4268431 Mlg_0495 Alkalilimnicola ehrlichii MLHE-1 outer membrane efflux protein YP_741339.1 541599 D 187272 CDS YP_741340.1 114319657 4268432 543080..544483 1 NC_008340.1 PFAM: multicopper oxidase, type 2; multicopper oxidase, type 3; KEGG: bur:Bcep18194_B2764 multicopper oxidase, type 3; multicopper oxidase, type 3 544483 4268432 Mlg_0496 Alkalilimnicola ehrlichii MLHE-1 multicopper oxidase, type 3 YP_741340.1 543080 D 187272 CDS YP_741341.1 114319658 4268433 544568..544930 1 NC_008340.1 PFAM: copper resistance protein CopC; KEGG: ilo:IL1233 copper resistance protein; copper resistance protein CopC 544930 4268433 Mlg_0497 Alkalilimnicola ehrlichii MLHE-1 copper resistance protein CopC YP_741341.1 544568 D 187272 CDS YP_741342.1 114319659 4268434 544934..545836 1 NC_008340.1 PFAM: copper resistance D domain protein; KEGG: pha:PSHAb0008 copper export protein; copper resistance D domain-containing protein 545836 4268434 Mlg_0498 Alkalilimnicola ehrlichii MLHE-1 copper resistance D domain-containing protein YP_741342.1 544934 D 187272 CDS YP_741343.1 114319660 4268435 545904..548330 1 NC_008340.1 TIGRFAM: type I restriction-modification system, M subunit; PFAM: N-6 DNA methylase; KEGG: cef:CE0257 restriction enzyme subunit M; type I restriction-modification system, M subunit 548330 4268435 Mlg_0499 Alkalilimnicola ehrlichii MLHE-1 type I restriction-modification system, M subunit YP_741343.1 545904 D 187272 CDS YP_741344.1 114319661 4268436 548323..549564 1 NC_008340.1 PFAM: restriction modification system DNA specificity domain; KEGG: mth:MTH941 type I restriction modification system, subunit S; restriction modification system DNA specificity subunit 549564 4268436 Mlg_0500 Alkalilimnicola ehrlichii MLHE-1 restriction modification system DNA specificity subunit YP_741344.1 548323 D 187272 CDS YP_741345.1 114319662 4268437 549610..549792 1 NC_008340.1 KEGG: mhu:Mhun_2961 protein of unknown function DUF262; hypothetical protein 549792 4268437 Mlg_0501 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741345.1 549610 D 187272 CDS YP_741346.1 114319663 4268438 549808..550098 1 NC_008340.1 KEGG: ilo:IL1614 hypothetical protein; hypothetical protein 550098 4268438 Mlg_0502 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741346.1 549808 D 187272 CDS YP_741347.1 114319664 4268439 550095..551183 1 NC_008340.1 PFAM: Appr-1-p processing domain protein; KEGG: ppu:PP5129 hypothetical protein; appr-1-p processing domain-containing protein 551183 4268439 Mlg_0503 Alkalilimnicola ehrlichii MLHE-1 appr-1-p processing domain-containing protein YP_741347.1 550095 D 187272 CDS YP_741348.1 114319665 4268440 551304..554639 1 NC_008340.1 KEGG: cef:CE0259 hypothetical protein; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: type III restriction enzyme, res subunit; protein of unknown function DUF450; SMART: DEAD/DEAH box helicase domain protein; HsdR family type I site-specific deoxyribonuclease 554639 4268440 Mlg_0504 Alkalilimnicola ehrlichii MLHE-1 HsdR family type I site-specific deoxyribonuclease YP_741348.1 551304 D 187272 CDS YP_741349.1 114319666 4268441 554636..555337 1 NC_008340.1 PFAM: protein of unknown function DUF45; KEGG: fra:Francci3_4010 protein of unknown function DUF45; hypothetical protein 555337 4268441 Mlg_0505 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741349.1 554636 D 187272 CDS YP_741350.1 114319667 4268442 555419..555640 1 NC_008340.1 KEGG: psb:Psyr_3725 ATPas; hypothetical protein 555640 4268442 Mlg_0506 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741350.1 555419 D 187272 CDS YP_741351.1 114319668 4268443 555748..556749 1 NC_008340.1 hypothetical protein 556749 4268443 Mlg_0507 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741351.1 555748 D 187272 CDS YP_741352.1 114319669 4268444 556746..557474 1 NC_008340.1 KEGG: eba:ebA5435 conserved hypothetical protein, probable DNA/RNA helicase; hypothetical protein 557474 4268444 Mlg_0508 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741352.1 556746 D 187272 CDS YP_741353.1 114319670 4268861 complement(557553..558716) 1 NC_008340.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: mca:MCA0835 fic family protein; Fic family protein 558716 4268861 Mlg_0509 Alkalilimnicola ehrlichii MLHE-1 Fic family protein YP_741353.1 557553 R 187272 CDS YP_741354.1 114319671 4268862 complement(558866..559288) 1 NC_008340.1 hypothetical protein 559288 4268862 Mlg_0510 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741354.1 558866 R 187272 CDS YP_741355.1 114319672 4268863 complement(559417..560229) 1 NC_008340.1 PFAM: Redoxin domain protein; KEGG: csa:Csal_2593 thiol:disulfide interchange protein; redoxin domain-containing protein 560229 4268863 Mlg_0511 Alkalilimnicola ehrlichii MLHE-1 redoxin domain-containing protein YP_741355.1 559417 R 187272 CDS YP_741356.1 114319673 4268864 560339..560887 1 NC_008340.1 TIGRFAM: 2'-5' RNA ligase; PFAM: 2',5' RNA ligase; KEGG: mca:MCA0386 2'-5' RNA ligase; 2'-5' RNA ligase 560887 4268864 Mlg_0512 Alkalilimnicola ehrlichii MLHE-1 2'-5' RNA ligase YP_741356.1 560339 D 187272 CDS YP_741357.1 114319674 4268865 561021..561485 1 NC_008340.1 PFAM: protein of unknown function DUF336; KEGG: bmb:BruAb1_1757 hypothetical protein; hypothetical protein 561485 4268865 Mlg_0513 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741357.1 561021 D 187272 CDS YP_741358.1 114319675 4268866 complement(561532..562266) 1 NC_008340.1 KEGG: pfo:Pfl_1631 hypothetical protein; hypothetical protein 562266 4268866 Mlg_0514 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741358.1 561532 R 187272 CDS YP_741359.1 114319676 4268867 complement(562304..562984) 1 NC_008340.1 glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate; phosphoribosylglycinamide formyltransferase 562984 purN 4268867 purN Alkalilimnicola ehrlichii MLHE-1 phosphoribosylglycinamide formyltransferase YP_741359.1 562304 R 187272 CDS YP_741360.1 114319677 4268868 complement(562981..564024) 1 NC_008340.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 564024 4268868 Mlg_0516 Alkalilimnicola ehrlichii MLHE-1 phosphoribosylaminoimidazole synthetase YP_741360.1 562981 R 187272 CDS YP_741361.1 114319678 4268869 564155..565189 1 NC_008340.1 KEGG: hch:HCH_01907 hypothetical protein; hypothetical protein 565189 4268869 Mlg_0517 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741361.1 564155 D 187272 CDS YP_741362.1 114319679 4268870 565314..566051 1 NC_008340.1 PFAM: Chromosomal replication initiator, DnaA; KEGG: csa:Csal_2110 chromosomal replication initiator, DnaA; regulatory inactivation of DnaA Hda protein 566051 4268870 Mlg_0518 Alkalilimnicola ehrlichii MLHE-1 regulatory inactivation of DnaA Hda protein YP_741362.1 565314 D 187272 CDS YP_741363.1 114319680 4268871 complement(566052..566465) 1 NC_008340.1 KEGG: rso:RSc1557 probable transmembrane protein; transmembrane protein 566465 4268871 Mlg_0519 Alkalilimnicola ehrlichii MLHE-1 transmembrane protein YP_741363.1 566052 R 187272 CDS YP_741364.1 114319681 4268872 complement(566459..567013) 1 NC_008340.1 KEGG: noc:Noc_0187 flavodoxin/nitric oxide synthase; flavodoxin/nitric oxide synthase 567013 4268872 Mlg_0520 Alkalilimnicola ehrlichii MLHE-1 flavodoxin/nitric oxide synthase YP_741364.1 566459 R 187272 CDS YP_741365.1 114319682 4268873 567190..568527 1 NC_008340.1 TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN; KEGG: lpp:lpp0698 hypothetical protein; ribonuclease BN 568527 4268873 Mlg_0521 Alkalilimnicola ehrlichii MLHE-1 ribonuclease BN YP_741365.1 567190 D 187272 CDS YP_741366.1 114319683 4268874 568524..568793 1 NC_008340.1 PFAM: acylphosphatase; KEGG: hch:HCH_04535 acylphosphatase; acylphosphatase 568793 4268874 Mlg_0522 Alkalilimnicola ehrlichii MLHE-1 acylphosphatase YP_741366.1 568524 D 187272 CDS YP_741367.1 114319684 4268875 568905..569243 1 NC_008340.1 PFAM: cytochrome c, class I; KEGG: noc:Noc_3050 cytochrome c, class I; cytochrome c, class I 569243 4268875 Mlg_0523 Alkalilimnicola ehrlichii MLHE-1 cytochrome c, class I YP_741367.1 568905 D 187272 CDS YP_741368.1 114319685 4268876 569243..569590 1 NC_008340.1 PFAM: cytochrome c, class I; KEGG: noc:Noc_3049 cytochrome c, class I; cytochrome c, class I 569590 4268876 Mlg_0524 Alkalilimnicola ehrlichii MLHE-1 cytochrome c, class I YP_741368.1 569243 D 187272 CDS YP_741369.1 114319686 4268877 complement(569674..570330) 1 NC_008340.1 PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: aba:Acid345_4330 protein serine/threonine phosphatases; Ser/Thr phosphatase 570330 4268877 Mlg_0525 Alkalilimnicola ehrlichii MLHE-1 Ser/Thr phosphatase YP_741369.1 569674 R 187272 CDS YP_741370.1 114319687 4268055 complement(570427..571104) 1 NC_008340.1 KEGG: dar:Daro_1971 protein of unknown function DUF52; dioxygenase-like protein 571104 4268055 Mlg_0526 Alkalilimnicola ehrlichii MLHE-1 dioxygenase-like protein YP_741370.1 570427 R 187272 CDS YP_741371.1 114319688 4268056 complement(571349..571648) 1 NC_008340.1 hypothetical protein 571648 4268056 Mlg_0527 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741371.1 571349 R 187272 CDS YP_741372.1 114319689 4268057 complement(572039..572590) 1 NC_008340.1 PFAM: protein of unknown function DUF59; KEGG: xac:XAC0926 hypothetical protein; hypothetical protein 572590 4268057 Mlg_0528 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741372.1 572039 R 187272 CDS YP_741373.1 114319690 4268058 572776..573507 1 NC_008340.1 PFAM: glutaredoxin; KEGG: psb:Psyr_2639 hypothetical protein; glutaredoxin 573507 4268058 Mlg_0529 Alkalilimnicola ehrlichii MLHE-1 glutaredoxin YP_741373.1 572776 D 187272 CDS YP_741374.1 114319691 4268059 complement(573520..574464) 1 NC_008340.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: tbd:Tbd_1110 conserved hypothetical protein containing TPR repeat; hypothetical protein 574464 4268059 Mlg_0530 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741374.1 573520 R 187272 CDS YP_741375.1 114319692 4268060 complement(574464..574889) 1 NC_008340.1 KEGG: tcx:Tcr_0270 hypothetical protein; hypothetical protein 574889 4268060 Mlg_0531 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741375.1 574464 R 187272 CDS YP_741376.1 114319693 4268061 complement(574917..576485) 1 NC_008340.1 PFAM: GCN5-related N-acetyltransferase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: hch:HCH_04040 predicted amidohydrolase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 576485 4268061 Mlg_0532 Alkalilimnicola ehrlichii MLHE-1 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_741376.1 574917 R 187272 CDS YP_741377.1 114319694 4268062 576720..578396 1 NC_008340.1 PFAM: surface antigen (D15); KEGG: pfo:Pfl_3647 surface antigen (D15); surface antigen (D15) 578396 4268062 Mlg_0533 Alkalilimnicola ehrlichii MLHE-1 surface antigen (D15) YP_741377.1 576720 D 187272 CDS YP_741378.1 114319695 4268063 578393..582244 1 NC_008340.1 PFAM: protein of unknown function DUF490; KEGG: spt:SPA4230 hypothetical protein; hypothetical protein 582244 4268063 Mlg_0534 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741378.1 578393 D 187272 CDS YP_741379.1 114319696 4268064 complement(582266..583117) 1 NC_008340.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; KEGG: mfa:Mfla_2045 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 583117 4268064 Mlg_0535 Alkalilimnicola ehrlichii MLHE-1 NAD-dependent epimerase/dehydratase YP_741379.1 582266 R 187272 CDS YP_741380.1 114319697 4268065 583214..583876 1 NC_008340.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: dge:Dgeo_2234 tRNA (guanosine-2'-O-)-methyltransferase; tRNA guanosine-2'-O-methyltransferase 583876 4268065 Mlg_0536 Alkalilimnicola ehrlichii MLHE-1 tRNA guanosine-2'-O-methyltransferase YP_741380.1 583214 D 187272 CDS YP_741381.1 114319698 4268066 complement(584579..584962) 1 NC_008340.1 KEGG: ilo:IL2540 hypothetical protein; hypothetical protein 584962 4268066 Mlg_0537 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741381.1 584579 R 187272 CDS YP_741382.1 114319699 4268067 complement(585108..585692) 1 NC_008340.1 PFAM: Lytic transglycosylase, catalytic; KEGG: hch:HCH_04774 soluble lytic murein transglycosylase and related regulatory protein (some contain LysM/invasin domains); lytic transglycosylase catalytic subunit 585692 4268067 Mlg_0538 Alkalilimnicola ehrlichii MLHE-1 lytic transglycosylase catalytic subunit YP_741382.1 585108 R 187272 CDS YP_741383.1 114319700 4268068 complement(585706..587412) 1 NC_008340.1 TIGRFAM: prolyl-tRNA synthetase; PFAM: tRNA synthetase, class II (G, H, P and S); Anticodon-binding domain protein; YbaK/prolyl-tRNA synthetase associated region; KEGG: csa:Csal_2139 prolyl-tRNA synthetase; prolyl-tRNA synthetase 587412 4268068 Mlg_0539 Alkalilimnicola ehrlichii MLHE-1 prolyl-tRNA synthetase YP_741383.1 585706 R 187272 CDS YP_741384.1 114319701 4268069 complement(587496..589577) 1 NC_008340.1 KEGG: rme:Rmet_6140 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; CBS domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 589577 4268069 Mlg_0540 Alkalilimnicola ehrlichii MLHE-1 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_741384.1 587496 R 187272 CDS YP_741385.1 114319702 4268070 complement(589574..589912) 1 NC_008340.1 KEGG: rme:Rmet_6141 hypothetical protein; hypothetical protein 589912 4268070 Mlg_0541 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741385.1 589574 R 187272 CDS YP_741386.1 114319703 4268071 complement(590079..591404) 1 NC_008340.1 KEGG: vvu:VV20031 predicted membrane protein; hypothetical protein 591404 4268071 Mlg_0542 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741386.1 590079 R 187272 CDS YP_741387.1 114319704 4268072 591706..592200 1 NC_008340.1 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit 592200 ilvH 4268072 ilvH Alkalilimnicola ehrlichii MLHE-1 acetolactate synthase 3 regulatory subunit YP_741387.1 591706 D 187272 CDS YP_741388.1 114319705 4270299 592257..593273 1 NC_008340.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 593273 4270299 Mlg_0544 Alkalilimnicola ehrlichii MLHE-1 ketol-acid reductoisomerase YP_741388.1 592257 D 187272 CDS YP_741389.1 114319706 4270300 593526..594587 1 NC_008340.1 hypothetical protein 594587 4270300 Mlg_0545 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741389.1 593526 D 187272 CDS YP_741390.1 114319707 4270301 594727..595230 1 NC_008340.1 PFAM: protein of unknown function DUF107; KEGG: tfu:Tfu_2226 integral membrane protein; hypothetical protein 595230 4270301 Mlg_0546 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741390.1 594727 D 187272 CDS YP_741391.1 114319708 4270302 595432..595797 1 NC_008340.1 hypothetical protein 595797 4270302 Mlg_0547 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741391.1 595432 D 187272 CDS YP_741392.1 114319709 4270303 complement(595957..596163) 1 NC_008340.1 hypothetical protein 596163 4270303 Mlg_0548 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741392.1 595957 R 187272 CDS YP_741393.1 114319710 4270304 596289..597044 1 NC_008340.1 TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: noc:Noc_2517 CDP-diacylglycerol--serine O-phosphatidyltransferase; CDP-diacylglycerol--serine O-phosphatidyltransferase 597044 4270304 Mlg_0549 Alkalilimnicola ehrlichii MLHE-1 CDP-diacylglycerol--serine O-phosphatidyltransferase YP_741393.1 596289 D 187272 CDS YP_741394.1 114319711 4270305 complement(597093..598055) 1 NC_008340.1 PFAM: peptidase M48, Ste24p; KEGG: noc:Noc_1572 peptidase M48, Ste24p; peptidase M48, Ste24p 598055 4270305 Mlg_0550 Alkalilimnicola ehrlichii MLHE-1 peptidase M48, Ste24p YP_741394.1 597093 R 187272 CDS YP_741395.1 114319712 4270306 598468..600021 1 NC_008340.1 catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase 600021 4270306 Mlg_0551 Alkalilimnicola ehrlichii MLHE-1 2-isopropylmalate synthase YP_741395.1 598468 D 187272 CDS YP_741396.1 114319713 4270307 600026..600820 1 NC_008340.1 TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: rme:Rmet_1397 phage SPO1 DNA polymerase-related protein; phage SPO1 DNA polymerase-like protein 600820 4270307 Mlg_0552 Alkalilimnicola ehrlichii MLHE-1 phage SPO1 DNA polymerase-like protein YP_741396.1 600026 D 187272 CDS YP_741397.1 114319714 4270308 600849..601334 1 NC_008340.1 TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: xcv:XCV3688 acetyltransferase; 30S ribosomal protein S18 601334 4270308 Mlg_0553 Alkalilimnicola ehrlichii MLHE-1 30S ribosomal protein S18 YP_741397.1 600849 D 187272 CDS YP_741398.1 114319715 4270309 601324..601530 1 NC_008340.1 KEGG: pfo:Pfl_3109 hypothetical protein; hypothetical protein 601530 4270309 Mlg_0554 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741398.1 601324 D 187272 CDS YP_741399.1 114319716 4270310 complement(601592..604345) 1 NC_008340.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 604345 valS 4270310 valS Alkalilimnicola ehrlichii MLHE-1 valyl-tRNA synthetase YP_741399.1 601592 R 187272 CDS YP_741400.1 114319717 4270311 complement(604500..605033) 1 NC_008340.1 PFAM: GCN5-related N-acetyltransferase; KEGG: reu:Reut_B3997 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase 605033 4270311 Mlg_0556 Alkalilimnicola ehrlichii MLHE-1 GCN5-like N-acetyltransferase YP_741400.1 604500 R 187272 CDS YP_741401.1 114319718 4270312 complement(605217..605657) 1 NC_008340.1 PFAM: DNA polymerase III chi subunit, HolC; KEGG: noc:Noc_0288 DNA polymerase III chi subunit, HolC; DNA polymerase III chi subunit, HolC 605657 4270312 Mlg_0557 Alkalilimnicola ehrlichii MLHE-1 DNA polymerase III chi subunit, HolC YP_741401.1 605217 R 187272 CDS YP_741402.1 114319719 4270313 complement(605659..607152) 1 NC_008340.1 PFAM: peptidase M17, leucyl aminopeptidase domain protein; KEGG: nmu:Nmul_A0746 leucyl aminopeptidase; PepA aminopeptidase 607152 4270313 Mlg_0558 Alkalilimnicola ehrlichii MLHE-1 PepA aminopeptidase YP_741402.1 605659 R 187272 CDS YP_741403.1 114319720 4270314 607309..608427 1 NC_008340.1 PFAM: permease YjgP/YjgQ family protein; KEGG: hch:HCH_01933 predicted permease; permease YjgP/YjgQ family protein 608427 4270314 Mlg_0559 Alkalilimnicola ehrlichii MLHE-1 permease YjgP/YjgQ family protein YP_741403.1 607309 D 187272 CDS YP_741404.1 114319721 4270315 608424..609506 1 NC_008340.1 PFAM: permease YjgP/YjgQ family protein; KEGG: noc:Noc_1909 permease YjgP/YjgQ; permease YjgP/YjgQ family protein 609506 4270315 Mlg_0560 Alkalilimnicola ehrlichii MLHE-1 permease YjgP/YjgQ family protein YP_741404.1 608424 D 187272 CDS YP_741405.1 114319722 4270890 complement(609532..610077) 1 NC_008340.1 PFAM: RDD domain containing protein; KEGG: tbd:Tbd_1995 transmembrane protein; RDD domain-containing protein 610077 4270890 Mlg_0561 Alkalilimnicola ehrlichii MLHE-1 RDD domain-containing protein YP_741405.1 609532 R 187272 CDS YP_741406.1 114319723 4270892 610197..611636 1 NC_008340.1 TIGRFAM: poly(A) polymerase; PFAM: Polynucleotide adenylyltransferase region; KEGG: mca:MCA2312 polyA polymerase; poly(A) polymerase 611636 4270892 Mlg_0562 Alkalilimnicola ehrlichii MLHE-1 poly(A) polymerase YP_741406.1 610197 D 187272 CDS YP_741407.1 114319724 4270893 611671..612174 1 NC_008340.1 KEGG: noc:Noc_0884 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 612174 4270893 Mlg_0563 Alkalilimnicola ehrlichii MLHE-1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_741407.1 611671 D 187272 CDS YP_741408.1 114319725 4270894 612218..613051 1 NC_008340.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 613051 panB 4270894 panB Alkalilimnicola ehrlichii MLHE-1 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_741408.1 612218 D 187272 CDS YP_741409.1 114319726 4270895 613048..613908 1 NC_008340.1 KEGG: ppu:PP4700 pantoate--beta-alanine ligase; TIGRFAM: pantoate--beta-alanine ligase; PFAM: Pantoate-beta-alanine ligase; pantothenate synthetase 613908 4270895 Mlg_0565 Alkalilimnicola ehrlichii MLHE-1 pantothenate synthetase YP_741409.1 613048 D 187272 CDS YP_741410.1 114319727 4270896 614033..614413 1 NC_008340.1 Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase 614413 4270896 Mlg_0566 Alkalilimnicola ehrlichii MLHE-1 aspartate alpha-decarboxylase YP_741410.1 614033 D 187272 CDS YP_741411.1 114319728 4270897 complement(614779..615834) 1 NC_008340.1 TIGRFAM: iron-sulfur cluster binding protein; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; domain of unknown function DUF1730; KEGG: pae:PA4950 hypothetical protein; iron-sulfur cluster binding protein 615834 4270897 Mlg_0567 Alkalilimnicola ehrlichii MLHE-1 iron-sulfur cluster binding protein YP_741411.1 614779 R 187272 CDS YP_741412.1 114319729 4270898 615878..617356 1 NC_008340.1 TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family N-terminal domain protein; KEGG: noc:Noc_0339 hypothetical protein; carbohydrate kinase 617356 4270898 Mlg_0568 Alkalilimnicola ehrlichii MLHE-1 carbohydrate kinase YP_741412.1 615878 D 187272 CDS YP_741413.1 114319730 4270899 617353..617856 1 NC_008340.1 PFAM: protein of unknown function UPF0079; KEGG: sgl:SG0333 hypothetical protein; hypothetical protein 617856 4270899 Mlg_0569 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741413.1 617353 D 187272 CDS YP_741414.1 114319731 4270900 617930..619288 1 NC_008340.1 PFAM: Peptidoglycan-binding LysM; cell wall hydrolase/autolysin; KEGG: noc:Noc_0337 N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase 619288 4270900 Mlg_0570 Alkalilimnicola ehrlichii MLHE-1 N-acetylmuramoyl-L-alanine amidase YP_741414.1 617930 D 187272 CDS YP_741415.1 114319732 4270901 619294..621204 1 NC_008340.1 TIGRFAM: DNA mismatch repair protein MutL; PFAM: ATP-binding region, ATPase domain protein domain protein; DNA mismatch repair protein, C-terminal domain protein; KEGG: pae:PA4946 DNA mismatch repair protein MutL; DNA mismatch repair protein MutL 621204 4270901 Mlg_0571 Alkalilimnicola ehrlichii MLHE-1 DNA mismatch repair protein MutL YP_741415.1 619294 D 187272 CDS YP_741416.1 114319733 4270902 621208..622161 1 NC_008340.1 KEGG: pfo:Pfl_0522 tRNA isopentenyltransferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase; tRNA delta(2)-isopentenylpyrophosphate transferase 622161 4270902 Mlg_0572 Alkalilimnicola ehrlichii MLHE-1 tRNA delta(2)-isopentenylpyrophosphate transferase YP_741416.1 621208 D 187272 CDS YP_741417.1 114319734 4270903 622297..622566 1 NC_008340.1 TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein, core; KEGG: xfa:XF0089 host factor-I protein; RNA chaperone Hfq 622566 4270903 Mlg_0573 Alkalilimnicola ehrlichii MLHE-1 RNA chaperone Hfq YP_741417.1 622297 D 187272 CDS YP_741418.1 114319735 4270904 622631..623896 1 NC_008340.1 PFAM: GTP-binding protein, HSR1-related; KEGG: pfo:Pfl_0524 GTP-binding protein, HSR1-like; HSR1-like GTP-binding protein 623896 4270904 Mlg_0574 Alkalilimnicola ehrlichii MLHE-1 HSR1-like GTP-binding protein YP_741418.1 622631 D 187272 CDS YP_741419.1 114319736 4270905 623992..625371 1 NC_008340.1 TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: noc:Noc_2588 HflK-like protein; HflK protein 625371 4270905 Mlg_0575 Alkalilimnicola ehrlichii MLHE-1 HflK protein YP_741419.1 623992 D 187272 CDS YP_741420.1 114319737 4270906 625371..626267 1 NC_008340.1 TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: tcx:Tcr_1091 HflC protein; HflC protein 626267 4270906 Mlg_0576 Alkalilimnicola ehrlichii MLHE-1 HflC protein YP_741420.1 625371 D 187272 CDS YP_741421.1 114319738 4268310 626420..627625 1 NC_008340.1 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine; ATP phosphoribosyltransferase 627625 4268310 Mlg_0577 Alkalilimnicola ehrlichii MLHE-1 ATP phosphoribosyltransferase YP_741421.1 626420 D 187272 CDS YP_741422.1 114319739 4268311 627695..628993 1 NC_008340.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 628993 4268311 Mlg_0578 Alkalilimnicola ehrlichii MLHE-1 adenylosuccinate synthetase YP_741422.1 627695 D 187272 CDS YP_741423.1 114319740 4268312 629080..629544 1 NC_008340.1 PFAM: 17 kDa surface antigen; KEGG: lpp:lpp0805 hypothetical protein; 17 kDa surface antigen 629544 4268312 Mlg_0579 Alkalilimnicola ehrlichii MLHE-1 17 kDa surface antigen YP_741423.1 629080 D 187272 CDS YP_741424.1 114319741 4268314 629873..632149 1 NC_008340.1 KEGG: mca:MCA1976 ribonuclease R; TIGRFAM: VacB and RNase II family 3'-5' exoribonucleases; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; Ribonuclease B, OB region N-terminal domain; Ribonuclease R winged-helix domain protein; SMART: Cold shock protein; ribonuclease R 632149 4268314 Mlg_0580 Alkalilimnicola ehrlichii MLHE-1 ribonuclease R YP_741424.1 629873 D 187272 CDS YP_741425.1 114319742 4268315 632146..632886 1 NC_008340.1 TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase, substrate binding; KEGG: sdn:Sden_0512 RNA methyltransferase TrmH, group 3; RNA methyltransferase 632886 4268315 Mlg_0581 Alkalilimnicola ehrlichii MLHE-1 RNA methyltransferase YP_741425.1 632146 D 187272 CDS YP_741426.1 114319743 4268316 633028..633387 1 NC_008340.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 633387 rpsF 4268316 rpsF Alkalilimnicola ehrlichii MLHE-1 30S ribosomal protein S6 YP_741426.1 633028 D 187272 CDS YP_741427.1 114319744 4268317 633397..633738 1 NC_008340.1 PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: pha:PSHAa2441 primosomal replication protein N; restart primosome assembly protein PriB 633738 4268317 Mlg_0583 Alkalilimnicola ehrlichii MLHE-1 restart primosome assembly protein PriB YP_741427.1 633397 D 187272 CDS YP_741428.1 114319745 4268318 633744..633968 1 NC_008340.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 633968 rpsR 4268318 rpsR Alkalilimnicola ehrlichii MLHE-1 30S ribosomal protein S18 YP_741428.1 633744 D 187272 CDS YP_741429.1 114319746 4268319 633989..634867 1 NC_008340.1 KEGG: pfo:Pfl_0536 hypothetical protein; hypothetical protein 634867 4268319 Mlg_0585 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741429.1 633989 D 187272 CDS YP_741430.1 114319747 4268320 634908..635360 1 NC_008340.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 635360 rplI 4268320 rplI Alkalilimnicola ehrlichii MLHE-1 50S ribosomal protein L9 YP_741430.1 634908 D 187272 CDS YP_741431.1 114319748 4268321 635465..639610 1 NC_008340.1 KEGG: nfa:nfa55760 replicative DNA helicase; TIGRFAM: Protein splicing (intein) site; PFAM: helix-turn-helix domain protein; DnaB domain protein helicase, N-terminal domain protein; DnaB domain protein helicase, C-terminal domain protein; SMART: Hedgehog/intein hint domain protein; XRE family transcriptional regulator 639610 4268321 Mlg_0587 Alkalilimnicola ehrlichii MLHE-1 XRE family transcriptional regulator YP_741431.1 635465 D 187272 CDS YP_741432.1 114319749 4268322 639645..640742 1 NC_008340.1 KEGG: pae:PA5302 catabolic alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein; alanine racemase 640742 4268322 Mlg_0588 Alkalilimnicola ehrlichii MLHE-1 alanine racemase YP_741432.1 639645 D 187272 CDS YP_741433.1 114319750 4268323 640778..642133 1 NC_008340.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 642133 4268323 Mlg_0589 Alkalilimnicola ehrlichii MLHE-1 DNA repair protein RadA YP_741433.1 640778 D 187272 CDS YP_741434.1 114319751 4268324 complement(642484..642861) 1 NC_008340.1 PFAM: type IV pilus assembly PilZ; KEGG: ade:Adeh_2982 hypothetical protein; type IV pilus assembly PilZ 642861 4268324 Mlg_0590 Alkalilimnicola ehrlichii MLHE-1 type IV pilus assembly PilZ YP_741434.1 642484 R 187272 CDS YP_741435.1 114319752 4268325 complement(642915..643775) 1 NC_008340.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 643775 4268325 Mlg_0591 Alkalilimnicola ehrlichii MLHE-1 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase YP_741435.1 642915 R 187272 CDS YP_741436.1 114319753 4270371 complement(644453..645295) 1 NC_008340.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 645295 4270371 Mlg_0592 Alkalilimnicola ehrlichii MLHE-1 prolipoprotein diacylglyceryl transferase YP_741436.1 644453 R 187272 CDS YP_741437.1 114319754 4270372 645765..646871 1 NC_008340.1 PFAM: porin, Gram-negative type; KEGG: tbd:Tbd_0448 outer membrane protein (porin); porin 646871 4270372 Mlg_0593 Alkalilimnicola ehrlichii MLHE-1 porin YP_741437.1 645765 D 187272 CDS YP_741438.1 114319755 4270373 647221..648285 1 NC_008340.1 PFAM: porin, Gram-negative type; KEGG: tbd:Tbd_0448 outer membrane protein (porin); porin 648285 4270373 Mlg_0594 Alkalilimnicola ehrlichii MLHE-1 porin YP_741438.1 647221 D 187272 CDS YP_741439.1 114319756 4270374 complement(648473..648802) 1 NC_008340.1 TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: ilo:IL1804 glutaredoxin-related protein; glutaredoxin-like protein 648802 4270374 Mlg_0595 Alkalilimnicola ehrlichii MLHE-1 glutaredoxin-like protein YP_741439.1 648473 R 187272 CDS YP_741440.1 114319757 4270375 complement(648936..650339) 1 NC_008340.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 650339 engA 4270375 engA Alkalilimnicola ehrlichii MLHE-1 GTP-binding protein EngA YP_741440.1 648936 R 187272 CDS YP_741441.1 114319758 4270376 complement(650401..651432) 1 NC_008340.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 651432 4270376 Mlg_0597 Alkalilimnicola ehrlichii MLHE-1 dihydroorotase YP_741441.1 650401 R 187272 CDS YP_741442.1 114319759 4270377 complement(651478..652329) 1 NC_008340.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; cobalamin (vitamin B12) biosynthesis CbiX protein 652329 4270377 Mlg_0598 Alkalilimnicola ehrlichii MLHE-1 cobalamin (vitamin B12) biosynthesis CbiX protein YP_741442.1 651478 R 187272 CDS YP_741443.1 114319760 4270378 652470..652904 1 NC_008340.1 PFAM: protein of unknown function DUF488; KEGG: gme:Gmet_0156 protein of unknown function DUF488; hypothetical protein 652904 4270378 Mlg_0599 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741443.1 652470 D 187272 CDS YP_741444.1 114319761 4270379 652932..653420 1 NC_008340.1 PFAM: Hemerythrin HHE cation binding domain protein; KEGG: sme:SMa1195 hypothetical protein; hemerythrin HHE cation binding domain-containing protein 653420 4270379 Mlg_0600 Alkalilimnicola ehrlichii MLHE-1 hemerythrin HHE cation binding domain-containing protein YP_741444.1 652932 D 187272 CDS YP_741445.1 114319762 4268480 653585..654793 1 NC_008340.1 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 654793 4268480 Mlg_0601 Alkalilimnicola ehrlichii MLHE-1 argininosuccinate synthase YP_741445.1 653585 D 187272 CDS YP_741446.1 114319763 4268481 complement(654844..655434) 1 NC_008340.1 PFAM: peptidase S16, lon domain protein; KEGG: dar:Daro_0066 peptidase S16, lon N-terminal; peptidase S16, lon domain-containing protein 655434 4268481 Mlg_0602 Alkalilimnicola ehrlichii MLHE-1 peptidase S16, lon domain-containing protein YP_741446.1 654844 R 187272 CDS YP_741447.1 114319764 4268482 complement(655431..656078) 1 NC_008340.1 TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; KEGG: pae:PA4019 probable aromatic acid decarboxylase; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 656078 4268482 Mlg_0603 Alkalilimnicola ehrlichii MLHE-1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_741447.1 655431 R 187272 CDS YP_741448.1 114319765 4268483 complement(656075..657436) 1 NC_008340.1 TIGRFAM: UDP-N-acetylmuramate; PFAM: cytoplasmic peptidoglycan synthetase domain protein; cytoplasmic peptidoglycan synthetases domain protein; Mur ligase, middle domain protein; KEGG: pae:PA4020 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase; UDP-N-acetylmuramate 657436 4268483 Mlg_0604 Alkalilimnicola ehrlichii MLHE-1 UDP-N-acetylmuramate YP_741448.1 656075 R 187272 CDS YP_741449.1 114319766 4268484 complement(657465..657971) 1 NC_008340.1 KEGG: mca:MCA1366 hypothetical protein; hypothetical protein 657971 4268484 Mlg_0605 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741449.1 657465 R 187272 CDS YP_741450.1 114319767 4268485 658121..658648 1 NC_008340.1 PFAM: Inorganic pyrophosphatase; KEGG: tbd:Tbd_1652 inorganic pyrophosphatase; inorganic diphosphatase 658648 4268485 Mlg_0606 Alkalilimnicola ehrlichii MLHE-1 inorganic diphosphatase YP_741450.1 658121 D 187272 CDS YP_741451.1 114319768 4268486 658973..659299 1 NC_008340.1 hypothetical protein 659299 4268486 Mlg_0607 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741451.1 658973 D 187272 CDS YP_741452.1 114319769 4268487 659308..660192 1 NC_008340.1 TIGRFAM: ribosomal protein L11 methyltransferase; PFAM: ribosomal L11 methyltransferase; KEGG: pae:PA4850 ribosomal protein L11 methyltransferase; 50S ribosomal protein L20 660192 4268487 Mlg_0608 Alkalilimnicola ehrlichii MLHE-1 50S ribosomal protein L20 YP_741452.1 659308 D 187272 CDS YP_741453.1 114319770 4268488 660196..660687 1 NC_008340.1 KEGG: pst:PSPTO4863 hypothetical protein; hypothetical protein 660687 4268488 Mlg_0609 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741453.1 660196 D 187272 CDS YP_741454.1 114319771 4268489 660785..661072 1 NC_008340.1 PFAM: helix-turn-helix, Fis-type; KEGG: sgl:SG0150 DNA-binding protein fis; Fis family transcriptional regulator 661072 4268489 Mlg_0610 Alkalilimnicola ehrlichii MLHE-1 Fis family transcriptional regulator YP_741454.1 660785 D 187272 CDS YP_741455.1 114319772 4268490 661108..662688 1 NC_008340.1 KEGG: tcx:Tcr_0439 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme; MGS domain protein; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 662688 4268490 Mlg_0611 Alkalilimnicola ehrlichii MLHE-1 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_741455.1 661108 D 187272 CDS YP_741456.1 114319773 4268491 662723..664015 1 NC_008340.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 664015 4268491 Mlg_0612 Alkalilimnicola ehrlichii MLHE-1 phosphoribosylamine--glycine ligase YP_741456.1 662723 D 187272 CDS YP_741457.1 114319774 4268492 complement(664134..664652) 1 NC_008340.1 TIGRFAM: phasin family protein; KEGG: csa:Csal_2464 hypothetical protein; phasin family protein 664652 4268492 Mlg_0613 Alkalilimnicola ehrlichii MLHE-1 phasin family protein YP_741457.1 664134 R 187272 CDS YP_741458.1 114319775 4268493 664785..665090 1 NC_008340.1 PFAM: RNP-1 like RNA-binding protein; KEGG: dvu:DVU2215 RNA-binding protein; RNP-1 like RNA-binding protein 665090 4268493 Mlg_0614 Alkalilimnicola ehrlichii MLHE-1 RNP-1 like RNA-binding protein YP_741458.1 664785 D 187272 CDS YP_741459.1 114319776 4268494 complement(665129..665506) 1 NC_008340.1 PFAM: protein of unknown function DUF583; KEGG: tcx:Tcr_0799 protein of unknown function DUF583; hypothetical protein 665506 4268494 Mlg_0615 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741459.1 665129 R 187272 CDS YP_741460.1 114319777 4268495 complement(665515..666474) 1 NC_008340.1 PFAM: peptidase M23B; KEGG: tcx:Tcr_0798 peptidase M23B; peptidase M23B 666474 4268495 Mlg_0616 Alkalilimnicola ehrlichii MLHE-1 peptidase M23B YP_741460.1 665515 R 187272 CDS YP_741461.1 114319778 4268496 complement(666571..666903) 1 NC_008340.1 hypothetical protein 666903 4268496 Mlg_0617 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741461.1 666571 R 187272 CDS YP_741462.1 114319779 4268497 complement(666976..668883) 1 NC_008340.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gsu:GSU0913 ABC transporter, ATP-binding protein; ABC transporter-like protein 668883 4268497 Mlg_0618 Alkalilimnicola ehrlichii MLHE-1 ABC transporter-like protein YP_741462.1 666976 R 187272 CDS YP_741463.1 114319780 4270601 669015..670322 1 NC_008340.1 KEGG: mag:amb4155 uncharacterized membrane-anchored protein conserved in bacteria; hypothetical protein 670322 4270601 Mlg_0619 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741463.1 669015 D 187272 CDS YP_741464.1 114319781 4270602 670333..671757 1 NC_008340.1 PFAM: Fmu (Sun) domain protein; KEGG: hma:rrnAC0628 tRNA and rRNA cytosine-C5-methylase; Fmu (Sun) domain-containing protein 671757 4270602 Mlg_0620 Alkalilimnicola ehrlichii MLHE-1 Fmu (Sun) domain-containing protein YP_741464.1 670333 D 187272 CDS YP_741465.1 114319782 4270603 complement(671799..672011) 1 NC_008340.1 hypothetical protein 672011 4270603 Mlg_0621 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741465.1 671799 R 187272 CDS YP_741466.1 114319783 4270604 672163..673038 1 NC_008340.1 PFAM: Auxin Efflux Carrier; KEGG: csa:Csal_1038 auxin efflux carrier; auxin efflux carrier 673038 4270604 Mlg_0622 Alkalilimnicola ehrlichii MLHE-1 auxin efflux carrier YP_741466.1 672163 D 187272 CDS YP_741467.1 114319784 4270605 complement(673049..673720) 1 NC_008340.1 PFAM: protein of unknown function UPF0074; Rhodanese domain protein; regulatory protein, ArsR; KEGG: bur:Bcep18194_B2905 transcriptional regulator, ArsR family; ArsR family transcriptional regulator 673720 4270605 Mlg_0623 Alkalilimnicola ehrlichii MLHE-1 ArsR family transcriptional regulator YP_741467.1 673049 R 187272 CDS YP_741468.1 114319785 4270606 complement(673717..674874) 1 NC_008340.1 PFAM: aminotransferase, class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: bps:BPSS2121 cysteine desulfurase; class V aminotransferase 674874 4270606 Mlg_0624 Alkalilimnicola ehrlichii MLHE-1 class V aminotransferase YP_741468.1 673717 R 187272 CDS YP_741469.1 114319786 4270607 complement(674887..675243) 1 NC_008340.1 PFAM: DsrE family protein; KEGG: rfr:Rfer_0463 DsrE-like protein; DsrE family protein 675243 4270607 Mlg_0625 Alkalilimnicola ehrlichii MLHE-1 DsrE family protein YP_741469.1 674887 R 187272 CDS YP_741470.1 114319787 4270608 675413..676087 1 NC_008340.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: gvi:gll2421 hypothetical protein; type 11 methyltransferase 676087 4270608 Mlg_0626 Alkalilimnicola ehrlichii MLHE-1 type 11 methyltransferase YP_741470.1 675413 D 187272 CDS YP_741471.1 114319788 4270609 676109..677110 1 NC_008340.1 PFAM: Bile acid:sodium symporter; KEGG: gsu:GSU1411 sodium/bile acid symporter family protein; bile acid:sodium symporter 677110 4270609 Mlg_0627 Alkalilimnicola ehrlichii MLHE-1 bile acid:sodium symporter YP_741471.1 676109 D 187272 CDS YP_741472.1 114319789 4270610 677278..678756 1 NC_008340.1 PFAM: KaiC domain protein; SMART: AAA ATPase; KEGG: noc:Noc_1328 KaiC; circadian clock protein, KaiC 678756 4270610 Mlg_0628 Alkalilimnicola ehrlichii MLHE-1 circadian clock protein, KaiC YP_741472.1 677278 D 187272 CDS YP_741473.1 114319790 4270611 678753..679163 1 NC_008340.1 KEGG: noc:Noc_1329 response regulator receiver; response regulator receiver protein 679163 4270611 Mlg_0629 Alkalilimnicola ehrlichii MLHE-1 response regulator receiver protein YP_741473.1 678753 D 187272 CDS YP_741474.1 114319791 4270612 679147..680904 1 NC_008340.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: noc:Noc_1330 diguanylate cyclase/phosphodiesterase; response regulator receiver modulated diguanylate cyclase/phosphodiesterase 680904 4270612 Mlg_0630 Alkalilimnicola ehrlichii MLHE-1 response regulator receiver modulated diguanylate cyclase/phosphodiesterase YP_741474.1 679147 D 187272 CDS YP_741475.1 114319792 4270614 681029..681736 1 NC_008340.1 PFAM: cyclic nucleotide-binding; KEGG: rru:Rru_A1622 transcriptional regulator, Crp/Fnr family; cyclic nucleotide-binding protein 681736 4270614 Mlg_0631 Alkalilimnicola ehrlichii MLHE-1 cyclic nucleotide-binding protein YP_741475.1 681029 D 187272 CDS YP_741476.1 114319793 4270615 681846..682454 1 NC_008340.1 PFAM: cytoplasmic chaperone TorD family protein; KEGG: cte:CT0493 hypothetical protein; cytoplasmic chaperone TorD family protein 682454 4270615 Mlg_0632 Alkalilimnicola ehrlichii MLHE-1 cytoplasmic chaperone TorD family protein YP_741476.1 681846 D 187272 CDS YP_741477.1 114319794 4270616 682469..684748 1 NC_008340.1 TIGRFAM: Twin-arginine translocation pathway signal; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: tth:TTC0155 thiosulfate reductase precursor; molybdopterin oxidoreductase 684748 4270616 Mlg_0633 Alkalilimnicola ehrlichii MLHE-1 molybdopterin oxidoreductase YP_741477.1 682469 D 187272 CDS YP_741478.1 114319795 4270823 684745..685509 1 NC_008340.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: eba:ebA1012 molybdenum enzyme of unknown function, medium subunit; 4Fe-4S ferredoxin 685509 4270823 Mlg_0634 Alkalilimnicola ehrlichii MLHE-1 4Fe-4S ferredoxin YP_741478.1 684745 D 187272 CDS YP_741479.1 114319796 4270824 685509..686237 1 NC_008340.1 KEGG: dde:Dde_0680 formate dehydrogenase gamma subunit; formate dehydrogenase gamma subunit 686237 4270824 Mlg_0635 Alkalilimnicola ehrlichii MLHE-1 formate dehydrogenase gamma subunit YP_741479.1 685509 D 187272 CDS YP_741480.1 114319797 4270825 complement(686292..687221) 1 NC_008340.1 PFAM: Auxin Efflux Carrier; KEGG: pol:Bpro_4280 auxin efflux carrier; auxin efflux carrier 687221 4270825 Mlg_0636 Alkalilimnicola ehrlichii MLHE-1 auxin efflux carrier YP_741480.1 686292 R 187272 CDS YP_741481.1 114319798 4270826 687513..688748 1 NC_008340.1 PFAM: phage integrase; KEGG: pol:Bpro_0966 phage integrase; phage integrase 688748 4270826 Mlg_0637 Alkalilimnicola ehrlichii MLHE-1 phage integrase YP_741481.1 687513 D 187272 CDS YP_741482.1 114319799 4270827 689054..689254 1 NC_008340.1 PFAM: Prophage CP4-57 regulatory; KEGG: dar:Daro_2246 prophage CP4-57 regulatory; phage transcriptional regulator, AlpA 689254 4270827 Mlg_0638 Alkalilimnicola ehrlichii MLHE-1 phage transcriptional regulator, AlpA YP_741482.1 689054 D 187272 CDS YP_741483.1 114319800 4270828 689254..691800 1 NC_008340.1 KEGG: bme:BMEI1696 hypothetical membrane spanning protein; hypothetical protein 691800 4270828 Mlg_0639 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741483.1 689254 D 187272 CDS YP_741484.1 114319801 4270829 692370..692735 1 NC_008340.1 hypothetical protein 692735 4270829 Mlg_0640 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741484.1 692370 D 187272 CDS YP_741485.1 114319802 4270830 692735..692971 1 NC_008340.1 hypothetical protein 692971 4270830 Mlg_0641 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741485.1 692735 D 187272 CDS YP_741486.1 114319803 4270831 692968..693342 1 NC_008340.1 KEGG: eba:ebA809 hypothetical protein; hypothetical protein 693342 4270831 Mlg_0642 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741486.1 692968 D 187272 CDS YP_741487.1 114319804 4270832 693339..694868 1 NC_008340.1 hypothetical protein 694868 4270832 Mlg_0643 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741487.1 693339 D 187272 CDS YP_741488.1 114319805 4270833 694910..696049 1 NC_008340.1 TIGRFAM: phage major capsid protein, HK97 family; PFAM: phage major capsid protein, HK97; KEGG: sil:SPO2261 major capsid protein, HK97 family; HK97 family phage major capsid protein 696049 4270833 Mlg_0644 Alkalilimnicola ehrlichii MLHE-1 HK97 family phage major capsid protein YP_741488.1 694910 D 187272 CDS YP_741489.1 114319806 4270834 696257..696538 1 NC_008340.1 hypothetical protein 696538 4270834 Mlg_0645 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741489.1 696257 D 187272 CDS YP_741490.1 114319807 4270836 complement(697261..698394) 1 NC_008340.1 KEGG: pst:PSPTO3852 hypothetical protein; hypothetical protein 698394 4270836 Mlg_0646 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741490.1 697261 R 187272 CDS YP_741491.1 114319808 4270837 complement(698391..699566) 1 NC_008340.1 KEGG: pst:PSPTO3852 hypothetical protein; hypothetical protein 699566 4270837 Mlg_0647 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741491.1 698391 R 187272 CDS YP_741492.1 114319809 4270838 complement(699563..703240) 1 NC_008340.1 PFAM: Peptidoglycan-binding LysM; peptidoglycan-binding protein LysM 703240 4270838 Mlg_0648 Alkalilimnicola ehrlichii MLHE-1 peptidoglycan-binding protein LysM YP_741492.1 699563 R 187272 CDS YP_741493.1 114319810 4270839 complement(703237..704028) 1 NC_008340.1 KEGG: pst:PSPTO3850 hypothetical protein; hypothetical protein 704028 4270839 Mlg_0649 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741493.1 703237 R 187272 CDS YP_741494.1 114319811 4268262 complement(704043..706226) 1 NC_008340.1 PFAM: Rhs element Vgr protein; KEGG: eca:ECA4142 RHS accessory genetic element; Rhs element Vgr protein 706226 4268262 Mlg_0650 Alkalilimnicola ehrlichii MLHE-1 Rhs element Vgr protein YP_741494.1 704043 R 187272 CDS YP_741495.1 114319812 4268263 complement(706380..707954) 1 NC_008340.1 PFAM: outer membrane efflux protein; KEGG: gme:Gmet_1650 outer membrane efflux protein; outer membrane efflux protein 707954 4268263 Mlg_0651 Alkalilimnicola ehrlichii MLHE-1 outer membrane efflux protein YP_741495.1 706380 R 187272 CDS YP_741496.1 114319813 4268264 complement(707951..711034) 1 NC_008340.1 PFAM: acriflavin resistance protein; KEGG: sth:STH3276 AcrB family membrane transport protein; acriflavin resistance protein 711034 4268264 Mlg_0652 Alkalilimnicola ehrlichii MLHE-1 acriflavin resistance protein YP_741496.1 707951 R 187272 CDS YP_741497.1 114319814 4268265 complement(711031..712260) 1 NC_008340.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: syf:Synpcc7942_1870 secretion protein HlyD; RND family efflux transporter MFP subunit 712260 4268265 Mlg_0653 Alkalilimnicola ehrlichii MLHE-1 RND family efflux transporter MFP subunit YP_741497.1 711031 R 187272 CDS YP_741498.1 114319815 4268266 712511..713956 1 NC_008340.1 TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter; KEGG: tcx:Tcr_0186 K+ transporter trk; TrkH family potassium uptake protein 713956 4268266 Mlg_0654 Alkalilimnicola ehrlichii MLHE-1 TrkH family potassium uptake protein YP_741498.1 712511 D 187272 CDS YP_741499.1 114319816 4268267 714232..715503 1 NC_008340.1 catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate; glucose-1-phosphate adenylyltransferase 715503 glgC 4268267 glgC Alkalilimnicola ehrlichii MLHE-1 glucose-1-phosphate adenylyltransferase YP_741499.1 714232 D 187272 CDS YP_741500.1 114319817 4268268 715591..718380 1 NC_008340.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein domain protein; Haloacid dehalogenase domain protein hydrolase; cation transporting ATPase domain protein; E1-E2 ATPase-associated domain protein; KEGG: noc:Noc_1406 cation transport ATPase; HAD superfamily P-type ATPase 718380 4268268 Mlg_0656 Alkalilimnicola ehrlichii MLHE-1 HAD superfamily P-type ATPase YP_741500.1 715591 D 187272 CDS YP_741501.1 114319818 4268269 complement(718430..720223) 1 NC_008340.1 the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli; potassium/proton antiporter 720223 cvrA 4268269 cvrA Alkalilimnicola ehrlichii MLHE-1 potassium/proton antiporter YP_741501.1 718430 R 187272 CDS YP_741502.1 114319819 4268270 720314..720703 1 NC_008340.1 KEGG: chy:CHY_1194 PII family protein; hypothetical protein 720703 4268270 Mlg_0658 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741502.1 720314 D 187272 CDS YP_741503.1 114319820 4268271 720753..722264 1 NC_008340.1 PFAM: protein of unknown function DUF1538; KEGG: wsu:WS0013 hypothetical protein; hypothetical protein 722264 4268271 Mlg_0659 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741503.1 720753 D 187272 CDS YP_741504.1 114319821 4268272 722261..722608 1 NC_008340.1 KEGG: wsu:WS0015 hypothetical protein; hypothetical protein 722608 4268272 Mlg_0660 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741504.1 722261 D 187272 CDS YP_741505.1 114319822 4268273 722636..723025 1 NC_008340.1 PFAM: CBS domain containing protein; KEGG: wsu:WS0014 hypothetical protein; signal-transduction protein 723025 4268273 Mlg_0661 Alkalilimnicola ehrlichii MLHE-1 signal-transduction protein YP_741505.1 722636 D 187272 CDS YP_741506.1 114319823 4268274 723056..723658 1 NC_008340.1 PFAM: Tellurite resistance protein TehB; Methyltransferase type 11; Methyltransferase type 12; KEGG: mca:MCA2850 hypothetical protein; type 12 methyltransferase 723658 4268274 Mlg_0662 Alkalilimnicola ehrlichii MLHE-1 type 12 methyltransferase YP_741506.1 723056 D 187272 CDS YP_741507.1 114319824 4268275 complement(724499..725623) 1 NC_008340.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: tth:TTC0284 pleiotropic regulatory protein; DegT/DnrJ/EryC1/StrS aminotransferase 725623 4268275 Mlg_0663 Alkalilimnicola ehrlichii MLHE-1 DegT/DnrJ/EryC1/StrS aminotransferase YP_741507.1 724499 R 187272 CDS YP_741508.1 114319825 4268276 complement(725768..726775) 1 NC_008340.1 catalyzes the formation of 2-oxoglutarate from isocitrate; isocitrate dehydrogenase 726775 4268276 Mlg_0664 Alkalilimnicola ehrlichii MLHE-1 isocitrate dehydrogenase YP_741508.1 725768 R 187272 CDS YP_741509.1 114319826 4268277 complement(726956..730111) 1 NC_008340.1 KEGG: cvi:CV1033 hypothetical protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase 730111 4268277 Mlg_0665 Alkalilimnicola ehrlichii MLHE-1 PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase YP_741509.1 726956 R 187272 CDS YP_741510.1 114319827 4268278 complement(730123..732876) 1 NC_008340.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: pol:Bpro_4149 periplasmic sensor signal transduction histidine kinase; periplasmic sensor signal transduction histidine kinase 732876 4268278 Mlg_0666 Alkalilimnicola ehrlichii MLHE-1 periplasmic sensor signal transduction histidine kinase YP_741510.1 730123 R 187272 CDS YP_741511.1 114319828 4268462 complement(732869..733096) 1 NC_008340.1 KEGG: pol:Bpro_4148 hypothetical protein; hypothetical protein 733096 4268462 Mlg_0667 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741511.1 732869 R 187272 CDS YP_741512.1 114319829 4268463 complement(733110..735269) 1 NC_008340.1 KEGG: pol:Bpro_4151 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T and DNA polymerase III; SMART: PAS domain containing protein; Exonuclease; PAS/PAC sensor protein 735269 4268463 Mlg_0668 Alkalilimnicola ehrlichii MLHE-1 PAS/PAC sensor protein YP_741512.1 733110 R 187272 CDS YP_741513.1 114319830 4268464 complement(735291..735662) 1 NC_008340.1 PFAM: response regulator receiver; KEGG: pol:Bpro_4150 response regulator receiver domain protein (CheY-like); response regulator receiver protein 735662 4268464 Mlg_0669 Alkalilimnicola ehrlichii MLHE-1 response regulator receiver protein YP_741513.1 735291 R 187272 CDS YP_741514.1 114319831 4268465 complement(735813..737690) 1 NC_008340.1 PFAM: cyclic nucleotide-binding; CBS domain containing protein; protein of unknown function DUF294, nucleotidyltransferase KEGG: vpa:VPA0075 hypothetical protein; cyclic nucleotide-binding protein 737690 4268465 Mlg_0670 Alkalilimnicola ehrlichii MLHE-1 cyclic nucleotide-binding protein YP_741514.1 735813 R 187272 CDS YP_741515.1 114319832 4268466 738074..740179 1 NC_008340.1 PFAM: Na+/solute symporter; KEGG: csa:Csal_2927 Na+/solute symporter; Na+/solute symporter 740179 4268466 Mlg_0671 Alkalilimnicola ehrlichii MLHE-1 Na+/solute symporter YP_741515.1 738074 D 187272 CDS YP_741516.1 114319833 4268467 740194..740772 1 NC_008340.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mac:MA1362 O-linked GlcNAc transferase; TPR repeat-containing protein 740772 4268467 Mlg_0672 Alkalilimnicola ehrlichii MLHE-1 TPR repeat-containing protein YP_741516.1 740194 D 187272 CDS YP_741517.1 114319834 4268468 complement(740896..742833) 1 NC_008340.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase 742833 4268468 Mlg_0673 Alkalilimnicola ehrlichii MLHE-1 acetyl-CoA synthetase YP_741517.1 740896 R 187272 CDS YP_741518.1 114319835 4268469 complement(743173..744534) 1 NC_008340.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: pae:PA4726 probable two-component response regulator; two-component response regulator CbrB 744534 4268469 Mlg_0674 Alkalilimnicola ehrlichii MLHE-1 two-component response regulator CbrB YP_741518.1 743173 R 187272 CDS YP_741519.1 114319836 4268470 complement(744538..747465) 1 NC_008340.1 KEGG: pfo:Pfl_4807 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; two-component sensor kinase CbrA 747465 4268470 Mlg_0675 Alkalilimnicola ehrlichii MLHE-1 two-component sensor kinase CbrA YP_741519.1 744538 R 187272 CDS YP_741520.1 114319837 4268471 complement(747753..748685) 1 NC_008340.1 PFAM: glutamyl-tRNA synthetase, class Ic; KEGG: cvi:CV3433 glutamyl-tRNA synthetase; glutamate--tRNA ligase 748685 4268471 Mlg_0676 Alkalilimnicola ehrlichii MLHE-1 glutamate--tRNA ligase YP_741520.1 747753 R 187272 CDS YP_741521.1 114319838 4268472 748862..749299 1 NC_008340.1 KEGG: mca:MCA0562 hypothetical protein; hypothetical protein 749299 4268472 Mlg_0677 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741521.1 748862 D 187272 CDS YP_741522.1 114319839 4268473 complement(749327..749716) 1 NC_008340.1 PFAM: GTP cyclohydrolase I; KEGG: mfa:Mfla_1400 GTP cyclohydrolase I; GTP cyclohydrolase I 749716 4268473 Mlg_0678 Alkalilimnicola ehrlichii MLHE-1 GTP cyclohydrolase I YP_741522.1 749327 R 187272 CDS YP_741523.1 114319840 4268474 749902..753408 1 NC_008340.1 TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; KEGG: pae:PA1527 chromosome segregation protein; chromosome segregation protein SMC 753408 4268474 Mlg_0679 Alkalilimnicola ehrlichii MLHE-1 chromosome segregation protein SMC YP_741523.1 749902 D 187272 CDS YP_741524.1 114319841 4268475 753557..754654 1 NC_008340.1 TIGRFAM: cell division protein ZipA; PFAM: ZipA, C-terminal FtsZ-binding region; KEGG: ilo:IL1701 secreted cell division protein; cell division protein ZipA 754654 4268475 Mlg_0680 Alkalilimnicola ehrlichii MLHE-1 cell division protein ZipA YP_741524.1 753557 D 187272 CDS YP_741525.1 114319842 4268476 754660..756681 1 NC_008340.1 KEGG: reu:Reut_A1886 NAD-dependent DNA ligase; TIGRFAM: DNA ligase, NAD-dependent; PFAM: helix-hairpin-helix motif; BRCT domain protein; NAD-dependent DNA ligase; zinc-finger, NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase, OB-fold; SMART: Helix-hairpin-helix DNA-binding, class 1; DNA ligase, NAD-dependent 756681 4268476 Mlg_0681 Alkalilimnicola ehrlichii MLHE-1 DNA ligase, NAD-dependent YP_741525.1 754660 D 187272 CDS YP_741526.1 114319843 4268477 complement(756947..759028) 1 NC_008340.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; KEGG: pae:PA4959 hypothetical protein; response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 759028 4268477 Mlg_0682 Alkalilimnicola ehrlichii MLHE-1 response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_741526.1 756947 R 187272 CDS YP_741527.1 114319844 4268478 complement(759041..760087) 1 NC_008340.1 TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein; KEGG: xcb:XC_1842 hypothetical protein; L-lysine 2,3-aminomutase 760087 4268478 Mlg_0683 Alkalilimnicola ehrlichii MLHE-1 L-lysine 2,3-aminomutase YP_741527.1 759041 R 187272 CDS YP_741528.1 114319845 4268479 760216..760785 1 NC_008340.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 760785 4268479 Mlg_0684 Alkalilimnicola ehrlichii MLHE-1 elongation factor P YP_741528.1 760216 D 187272 CDS YP_741529.1 114319846 4268844 760799..761743 1 NC_008340.1 PFAM: tRNA synthetase, class II (D, K and N); KEGG: vch:VC2655 lysyl-tRNA synthetase-related protein; tRNA synthetase, class II (D, K and N) 761743 4268844 Mlg_0685 Alkalilimnicola ehrlichii MLHE-1 tRNA synthetase, class II (D, K and N) YP_741529.1 760799 D 187272 CDS YP_741530.1 114319847 4268845 complement(761751..762116) 1 NC_008340.1 KEGG: tbd:Tbd_1102 hypothetical protein; hypothetical protein 762116 4268845 Mlg_0686 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741530.1 761751 R 187272 CDS YP_741531.1 114319848 4268846 762183..763037 1 NC_008340.1 PFAM: PHP C-terminal domain protein; SMART: phosphoesterase PHP domain protein; KEGG: mca:MCA0359 PHP domain protein; phosphotransferase domain-containing protein 763037 4268846 Mlg_0687 Alkalilimnicola ehrlichii MLHE-1 phosphotransferase domain-containing protein YP_741531.1 762183 D 187272 CDS YP_741532.1 114319849 4268847 763202..764389 1 NC_008340.1 catalyzes the formation of beta-ketovaleryl-CoA from acetyl-CoA and propionyl-CoA; beta-ketothiolase 764389 4268847 Mlg_0688 Alkalilimnicola ehrlichii MLHE-1 beta-ketothiolase YP_741532.1 763202 D 187272 CDS YP_741533.1 114319850 4268848 complement(764498..766669) 1 NC_008340.1 KEGG: tbd:Tbd_0085 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) and response regulator receiver modulation; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 766669 4268848 Mlg_0689 Alkalilimnicola ehrlichii MLHE-1 response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_741533.1 764498 R 187272 CDS YP_741534.1 114319851 4268849 complement(766727..768361) 1 NC_008340.1 KEGG: rfr:Rfer_2486 histidine kinase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; HDIG domain protein; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase 768361 4268849 Mlg_0690 Alkalilimnicola ehrlichii MLHE-1 metal dependent phosphohydrolase YP_741534.1 766727 R 187272 CDS YP_741535.1 114319852 4268850 768540..770600 1 NC_008340.1 KEGG: tbd:Tbd_1191 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) and response regulator receiver modulation; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase, HAMP region domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase 770600 4268850 Mlg_0691 Alkalilimnicola ehrlichii MLHE-1 PAS/PAC sensor-containing diguanylate cyclase YP_741535.1 768540 D 187272 CDS YP_741536.1 114319853 4268851 complement(770642..770842) 1 NC_008340.1 hypothetical protein 770842 4268851 Mlg_0692 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741536.1 770642 R 187272 CDS YP_741537.1 114319854 4268852 complement(770997..772373) 1 NC_008340.1 KEGG: noc:Noc_0612 exodeoxyribonuclease VII; TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII, large subunit; nucleic acid binding, OB-fold, tRNA/helicase-type; exodeoxyribonuclease VII large subunit 772373 4268852 Mlg_0693 Alkalilimnicola ehrlichii MLHE-1 exodeoxyribonuclease VII large subunit YP_741537.1 770997 R 187272 CDS YP_741538.1 114319855 4268853 772864..773757 1 NC_008340.1 PFAM: protein of unknown function DUF1295; KEGG: nar:Saro_0560 protein of unknown function DUF1295; hypothetical protein 773757 4268853 Mlg_0694 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741538.1 772864 D 187272 CDS YP_741539.1 114319856 4268854 complement(773697..774209) 1 NC_008340.1 KEGG: rru:Rru_A2723 rubrerythrin; rubrerythrin 774209 4268854 Mlg_0695 Alkalilimnicola ehrlichii MLHE-1 rubrerythrin YP_741539.1 773697 R 187272 CDS YP_741540.1 114319857 4268855 complement(774206..775051) 1 NC_008340.1 PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; KEGG: rru:Rru_A2722 2-oxoglutarate synthase, beta subunit; thiamine pyrophosphate binding domain-containing protein 775051 4268855 Mlg_0696 Alkalilimnicola ehrlichii MLHE-1 thiamine pyrophosphate binding domain-containing protein YP_741540.1 774206 R 187272 CDS YP_741541.1 114319858 4268856 complement(775048..776778) 1 NC_008340.1 PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: rru:Rru_A2721 2-oxoglutarate synthase, alpha subunit; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 776778 4268856 Mlg_0697 Alkalilimnicola ehrlichii MLHE-1 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein YP_741541.1 775048 R 187272 CDS YP_741542.1 114319859 4268857 777079..778545 1 NC_008340.1 PFAM: flagellin domain protein; KEGG: lpn:lpg1340 flagellin; flagellin domain-containing protein 778545 4268857 Mlg_0698 Alkalilimnicola ehrlichii MLHE-1 flagellin domain-containing protein YP_741542.1 777079 D 187272 CDS YP_741543.1 114319860 4268858 complement(778630..781395) 1 NC_008340.1 TIGRFAM: methyltransferase FkbM family; KEGG: csa:Csal_1986 sulfotransferase; FkbM family methyltransferase 781395 4268858 Mlg_0699 Alkalilimnicola ehrlichii MLHE-1 FkbM family methyltransferase YP_741543.1 778630 R 187272 CDS YP_741544.1 114319861 4268859 781683..783143 1 NC_008340.1 PFAM: flagellin domain protein; KEGG: noc:Noc_2367 flagellin; flagellin domain-containing protein 783143 4268859 Mlg_0700 Alkalilimnicola ehrlichii MLHE-1 flagellin domain-containing protein YP_741544.1 781683 D 187272 CDS YP_741545.1 114319862 4268860 783234..783623 1 NC_008340.1 PFAM: flagellar protein FlaG protein; KEGG: dar:Daro_0783 flagellar protein FlaG protein; flagellar protein FlaG protein 783623 4268860 Mlg_0701 Alkalilimnicola ehrlichii MLHE-1 flagellar protein FlaG protein YP_741545.1 783234 D 187272 CDS YP_741546.1 114319863 4268091 784226..784657 1 NC_008340.1 PFAM: flagellar protein FlaG protein; KEGG: gsu:GSU3015 flagellin FlaG; flagellar protein FlaG protein 784657 4268091 Mlg_0702 Alkalilimnicola ehrlichii MLHE-1 flagellar protein FlaG protein YP_741546.1 784226 D 187272 CDS YP_741547.1 114319864 4268092 784745..786178 1 NC_008340.1 PFAM: flagellar hook-associated protein 2 domain protein; flagellar hook-associated 2 domain protein; flagellin hook IN repeat protein; KEGG: neu:NE1595 flagellar hook-associated protein 2; flagellar hook-associated 2 domain-containing protein 786178 4268092 Mlg_0703 Alkalilimnicola ehrlichii MLHE-1 flagellar hook-associated 2 domain-containing protein YP_741547.1 784745 D 187272 CDS YP_741548.1 114319865 4268093 786827..787264 1 NC_008340.1 PFAM: flagellar protein FliS; KEGG: noc:Noc_2364 flagellar protein FliS; flagellar protein FliS 787264 4268093 Mlg_0704 Alkalilimnicola ehrlichii MLHE-1 flagellar protein FliS YP_741548.1 786827 D 187272 CDS YP_741549.1 114319866 4268094 787267..787602 1 NC_008340.1 KEGG: plu:plu1951 flagellar protein FliT; flagellar protein FliT 787602 4268094 Mlg_0705 Alkalilimnicola ehrlichii MLHE-1 flagellar protein FliT YP_741549.1 787267 D 187272 CDS YP_741550.1 114319867 4268095 787693..789375 1 NC_008340.1 PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; KEGG: noc:Noc_2362 sigma-54 specific, transcriptional regulator, fis family; Fis family transcriptional regulator 789375 4268095 Mlg_0706 Alkalilimnicola ehrlichii MLHE-1 Fis family transcriptional regulator YP_741550.1 787693 D 187272 CDS YP_741551.1 114319868 4268096 789573..790982 1 NC_008340.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: hch:HCH_05196 sigma 54-dependent transcriptional activator containing CheY-like receiver domain; Fis family transcriptional regulator 790982 4268096 Mlg_0707 Alkalilimnicola ehrlichii MLHE-1 Fis family transcriptional regulator YP_741551.1 789573 D 187272 CDS YP_741552.1 114319869 4268097 791019..791345 1 NC_008340.1 TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: noc:Noc_2360 flagellar hook-basal body complex protein FliE; flagellar hook-basal body complex subunit FliE 791345 4268097 Mlg_0708 Alkalilimnicola ehrlichii MLHE-1 flagellar hook-basal body complex subunit FliE YP_741552.1 791019 D 187272 CDS YP_741553.1 114319870 4268098 791396..793138 1 NC_008340.1 TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring C-terminal domain protein; KEGG: noc:Noc_2359 flagellar FliF M-ring protein; flagellar M-ring protein FliF 793138 4268098 Mlg_0709 Alkalilimnicola ehrlichii MLHE-1 flagellar M-ring protein FliF YP_741553.1 791396 D 187272 CDS YP_741554.1 114319871 4268099 793125..794129 1 NC_008340.1 PFAM: flagellar motor switch protein FliG; KEGG: xcb:XC_2261 flagellar protein; flagellar motor switch protein FliG 794129 4268099 Mlg_0710 Alkalilimnicola ehrlichii MLHE-1 flagellar motor switch protein FliG YP_741554.1 793125 D 187272 CDS YP_741555.1 114319872 4268100 794155..795042 1 NC_008340.1 PFAM: flagellar assembly protein FliH; KEGG: noc:Noc_2357 flagellar assembly protein FliH; flagellar assembly protein FliH 795042 4268100 Mlg_0711 Alkalilimnicola ehrlichii MLHE-1 flagellar assembly protein FliH YP_741555.1 794155 D 187272 CDS YP_741556.1 114319873 4268101 795035..796411 1 NC_008340.1 KEGG: noc:Noc_2356 flagellar biosynthesis/type III secretory pathway ATPase, FliI/YscN; TIGRFAM: ATPase, FliI/YscN family; flagellar protein export ATPase FliI; PFAM: H+-transporting two-sector ATPase, alpha/beta subunit, central region; SMART: AAA ATPase; flagellar protein export ATPase FliI 796411 4268101 Mlg_0712 Alkalilimnicola ehrlichii MLHE-1 flagellar protein export ATPase FliI YP_741556.1 795035 D 187272 CDS YP_741557.1 114319874 4268102 796473..796919 1 NC_008340.1 TIGRFAM: flagellar export protein FliJ; KEGG: ppu:PP4365 flagellar protein FliJ; flagellar export protein FliJ 796919 4268102 Mlg_0713 Alkalilimnicola ehrlichii MLHE-1 flagellar export protein FliJ YP_741557.1 796473 D 187272 CDS YP_741558.1 114319875 4268103 797522..798631 1 NC_008340.1 PFAM: flagellar hook-length control protein; KEGG: pae:PA1441 flagellar hook-length control protein FliK; flagellar hook-length control protein 798631 4268103 Mlg_0714 Alkalilimnicola ehrlichii MLHE-1 flagellar hook-length control protein YP_741558.1 797522 D 187272 CDS YP_741559.1 114319876 4268104 798996..799901 1 NC_008340.1 PFAM: peptidase M48, Ste24p; HtpX domain protein; KEGG: nmu:Nmul_A1034 peptidase M48, Ste24p; HtpX domain-containing protein 799901 4268104 Mlg_0715 Alkalilimnicola ehrlichii MLHE-1 HtpX domain-containing protein YP_741559.1 798996 D 187272 CDS YP_741560.1 114319877 4268105 800014..800955 1 NC_008340.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: hch:HCH_05375 permease of the drug/metabolite transporter (DMT) superfamily; hypothetical protein 800955 4268105 Mlg_0716 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741560.1 800014 D 187272 CDS YP_741561.1 114319878 4268106 complement(801010..801288) 1 NC_008340.1 PFAM: BolA family protein; KEGG: mca:MCA1644 BolA protein; transcriptional regulator BolA 801288 4268106 Mlg_0717 Alkalilimnicola ehrlichii MLHE-1 transcriptional regulator BolA YP_741561.1 801010 R 187272 CDS YP_741562.1 114319879 4268107 complement(801285..801584) 1 NC_008340.1 unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity; hypothetical protein 801584 4268107 Mlg_0718 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741562.1 801285 R 187272 CDS YP_741563.1 114319880 4268108 801779..802402 1 NC_008340.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC, N-terminal domain; KEGG: pfo:Pfl_1488 SUA5/YciO/YrdC/YwlC; translation factor SUA5 802402 4268108 Mlg_0719 Alkalilimnicola ehrlichii MLHE-1 translation factor SUA5 YP_741563.1 801779 D 187272 CDS YP_741564.1 114319881 4268687 802710..803924 1 NC_008340.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 803924 4268687 Mlg_0720 Alkalilimnicola ehrlichii MLHE-1 tryptophanyl-tRNA synthetase YP_741564.1 802710 D 187272 CDS YP_741565.1 114319882 4268688 803921..804751 1 NC_008340.1 PFAM: chromosome segregation and condensation protein ScpA; KEGG: ppu:PP4498 segregation and condensation protein A; condensin subunit ScpA 804751 4268688 Mlg_0721 Alkalilimnicola ehrlichii MLHE-1 condensin subunit ScpA YP_741565.1 803921 D 187272 CDS YP_741566.1 114319883 4268689 804755..805339 1 NC_008340.1 TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: mca:MCA2206 segregation and condensation protein B; condensin subunit ScpB 805339 4268689 Mlg_0722 Alkalilimnicola ehrlichii MLHE-1 condensin subunit ScpB YP_741566.1 804755 D 187272 CDS YP_741567.1 114319884 4268690 complement(805914..806141) 1 NC_008340.1 hypothetical protein 806141 4268690 Mlg_0723 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741567.1 805914 R 187272 CDS YP_741568.1 114319885 4268691 806230..806691 1 NC_008340.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: gvi:glr1369 hypothetical protein; BadM/Rrf2 family transcriptional regulator 806691 4268691 Mlg_0724 Alkalilimnicola ehrlichii MLHE-1 BadM/Rrf2 family transcriptional regulator YP_741568.1 806230 D 187272 CDS YP_741569.1 114319886 4268692 806767..808215 1 NC_008340.1 with SufCD activates cysteine desulfurase SufS; cysteine desulfurase 808215 4268692 Mlg_0725 Alkalilimnicola ehrlichii MLHE-1 cysteine desulfurase YP_741569.1 806767 D 187272 CDS YP_741570.1 114319887 4268693 808273..809022 1 NC_008340.1 KEGG: noc:Noc_2489 FeS assembly ATPase SufC; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: AAA ATPase; FeS assembly ATPase SufC 809022 4268693 Mlg_0726 Alkalilimnicola ehrlichii MLHE-1 FeS assembly ATPase SufC YP_741570.1 808273 D 187272 CDS YP_741571.1 114319888 4268694 809033..810358 1 NC_008340.1 TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: csa:Csal_1235 FeS assembly protein SufD; FeS assembly protein SufD 810358 4268694 Mlg_0727 Alkalilimnicola ehrlichii MLHE-1 FeS assembly protein SufD YP_741571.1 809033 D 187272 CDS YP_741572.1 114319889 4268695 810355..811620 1 NC_008340.1 TIGRFAM: cysteine desulfurases, SufS subfamily; PFAM: aminotransferase, class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: gvi:glr1373 probable aminotransferase; SufS subfamily cysteine desulfurase 811620 4268695 Mlg_0728 Alkalilimnicola ehrlichii MLHE-1 SufS subfamily cysteine desulfurase YP_741572.1 810355 D 187272 CDS YP_741573.1 114319890 4268696 811719..812234 1 NC_008340.1 TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein; KEGG: ade:Adeh_0847 SUF system FeS assembly protein; NifU family SUF system FeS assembly protein 812234 4268696 Mlg_0729 Alkalilimnicola ehrlichii MLHE-1 NifU family SUF system FeS assembly protein YP_741573.1 811719 D 187272 CDS YP_741574.1 114319891 4268697 812347..813399 1 NC_008340.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mca:MCA2814 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 813399 4268697 Mlg_0730 Alkalilimnicola ehrlichii MLHE-1 RND family efflux transporter MFP subunit YP_741574.1 812347 D 187272 CDS YP_741575.1 114319892 4268698 813396..816437 1 NC_008340.1 PFAM: acriflavin resistance protein; KEGG: dde:Dde_0670 transporter, AcrB/D/F family; acriflavin resistance protein 816437 4268698 Mlg_0731 Alkalilimnicola ehrlichii MLHE-1 acriflavin resistance protein YP_741575.1 813396 D 187272 CDS YP_741576.1 114319893 4268699 816572..817879 1 NC_008340.1 KEGG: dde:Dde_0673 glycine betaine/L-proline transport ATP binding subunit; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: CBS domain containing protein; ABC transporter related; SMART: AAA ATPase; glycine betaine/L-proline ABC transporter ATPase 817879 4268699 Mlg_0732 Alkalilimnicola ehrlichii MLHE-1 glycine betaine/L-proline ABC transporter ATPase YP_741576.1 816572 D 187272 CDS YP_741577.1 114319894 4268700 817876..818724 1 NC_008340.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csa:Csal_1902 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 818724 4268700 Mlg_0733 Alkalilimnicola ehrlichii MLHE-1 binding-protein-dependent transport systems inner membrane component YP_741577.1 817876 D 187272 CDS YP_741578.1 114319895 4268701 818751..819599 1 NC_008340.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: csa:Csal_3102 substrate-binding region of ABC-type glycine betaine transport system; response regulator receiver protein 819599 4268701 Mlg_0734 Alkalilimnicola ehrlichii MLHE-1 response regulator receiver protein YP_741578.1 818751 D 187272 CDS YP_741579.1 114319896 4268702 819836..820267 1 NC_008340.1 hypothetical protein 820267 4268702 Mlg_0735 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741579.1 819836 D 187272 CDS YP_741580.1 114319897 4268703 complement(820577..821590) 1 NC_008340.1 KEGG: tcx:Tcr_0552 lipoprotein; lipoprotein 821590 4268703 Mlg_0736 Alkalilimnicola ehrlichii MLHE-1 lipoprotein YP_741580.1 820577 R 187272 CDS YP_741581.1 114319898 4270498 821837..822958 1 NC_008340.1 PFAM: ferrochelatase; KEGG: noc:Noc_1545 ferrochelatase; ferrochelatase 822958 4270498 Mlg_0737 Alkalilimnicola ehrlichii MLHE-1 ferrochelatase YP_741581.1 821837 D 187272 CDS YP_741582.1 114319899 4270499 822951..823445 1 NC_008340.1 KEGG: bja:blr7315 hypothetical protein; hypothetical protein 823445 4270499 Mlg_0738 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741582.1 822951 D 187272 CDS YP_741583.1 114319900 4270500 823449..823715 1 NC_008340.1 PFAM: multiple resistance and pH regulation protein F; KEGG: noc:Noc_1286 multiple resistance and pH regulation protein F; multiple resistance and pH regulation protein F 823715 4270500 Mlg_0739 Alkalilimnicola ehrlichii MLHE-1 multiple resistance and pH regulation protein F YP_741583.1 823449 D 187272 CDS YP_741584.1 114319901 4270501 823718..824017 1 NC_008340.1 subunit G of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; monovalent cation/H+ antiporter subunit G 824017 4270501 Mlg_0740 Alkalilimnicola ehrlichii MLHE-1 monovalent cation/H+ antiporter subunit G YP_741584.1 823718 D 187272 CDS YP_741585.1 114319902 4270502 824014..824967 1 NC_008340.1 KEGG: bja:blr7318 hypothetical protein; hypothetical protein 824967 4270502 Mlg_0741 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741585.1 824014 D 187272 CDS YP_741586.1 114319903 4270503 824967..825278 1 NC_008340.1 PFAM: NADH-ubiquinone oxidoreductase, chain 4L; KEGG: noc:Noc_1282 NADH-ubiquinone oxidoreductase, chain 4L; NADH-ubiquinone oxidoreductase, chain 4L 825278 4270503 Mlg_0742 Alkalilimnicola ehrlichii MLHE-1 NADH-ubiquinone oxidoreductase, chain 4L YP_741586.1 824967 D 187272 CDS YP_741587.1 114319904 4270504 825275..826702 1 NC_008340.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: noc:Noc_1281 NADH dehydrogenase (quinone); NADH dehydrogenase (quinone) 826702 4270504 Mlg_0743 Alkalilimnicola ehrlichii MLHE-1 NADH dehydrogenase (quinone) YP_741587.1 825275 D 187272 CDS YP_741588.1 114319905 4270505 826699..828213 1 NC_008340.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: noc:Noc_1280 NADH dehydrogenase (quinone); NADH dehydrogenase (quinone) 828213 4270505 Mlg_0744 Alkalilimnicola ehrlichii MLHE-1 NADH dehydrogenase (quinone) YP_741588.1 826699 D 187272 CDS YP_741589.1 114319906 4270506 828353..829012 1 NC_008340.1 PFAM: NUDIX hydrolase; KEGG: dge:Dgeo_1510 NUDIX hydrolase; NUDIX hydrolase 829012 4270506 Mlg_0745 Alkalilimnicola ehrlichii MLHE-1 NUDIX hydrolase YP_741589.1 828353 D 187272 CDS YP_741590.1 114319907 4270507 829043..830113 1 NC_008340.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 830113 4270507 Mlg_0746 Alkalilimnicola ehrlichii MLHE-1 quinolinate synthetase YP_741590.1 829043 D 187272 CDS YP_741591.1 114319908 4270508 830129..831280 1 NC_008340.1 PFAM: major facilitator superfamily MFS_1; KEGG: wsu:WS1365 transport protein; major facilitator transporter 831280 4270508 Mlg_0747 Alkalilimnicola ehrlichii MLHE-1 major facilitator transporter YP_741591.1 830129 D 187272 CDS YP_741592.1 114319909 4270509 831378..833069 1 NC_008340.1 PFAM: alpha/beta hydrolase fold; Poly-beta-hydroxybutyrate polymerase domain protein; KEGG: dar:Daro_0993 alpha/beta hydrolase fold:poly-beta-hydroxybutyrate polymerase, N-terminal; poly-beta-hydroxybutyrate polymerase domain-containing protein 833069 4270509 Mlg_0748 Alkalilimnicola ehrlichii MLHE-1 poly-beta-hydroxybutyrate polymerase domain-containing protein YP_741592.1 831378 D 187272 CDS YP_741593.1 114319910 4270510 833111..834001 1 NC_008340.1 PFAM: Silent information regulator protein Sir2; KEGG: transcriptional regulator, Sir2 family; silent information regulator protein Sir2 834001 4270510 Mlg_0749 Alkalilimnicola ehrlichii MLHE-1 silent information regulator protein Sir2 YP_741593.1 833111 D 187272 CDS YP_741594.1 114319911 4270511 complement(834131..835090) 1 NC_008340.1 PFAM: Radical SAM domain protein; KEGG: noc:Noc_0590 radical SAM domain protein; radical SAM domain-containing protein 835090 4270511 Mlg_0750 Alkalilimnicola ehrlichii MLHE-1 radical SAM domain-containing protein YP_741594.1 834131 R 187272 CDS YP_741595.1 114319912 4270512 complement(835121..836542) 1 NC_008340.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: dvu:DVU1037 mercuric reductase; pyridine nucleotide-disulfide oxidoreductase dimerisation region 836542 4270512 Mlg_0751 Alkalilimnicola ehrlichii MLHE-1 pyridine nucleotide-disulfide oxidoreductase dimerisation region YP_741595.1 835121 R 187272 CDS YP_741596.1 114319913 4270513 complement(836539..837228) 1 NC_008340.1 KEGG: lpn:lpg0596 hypothetical protein; hypothetical protein 837228 4270513 Mlg_0752 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741596.1 836539 R 187272 CDS YP_741597.1 114319914 4270514 complement(837322..838533) 1 NC_008340.1 KEGG: sil:SPO1611 hypothetical protein; hypothetical protein 838533 4270514 Mlg_0753 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741597.1 837322 R 187272 CDS YP_741598.1 114319915 4270515 complement(838661..839281) 1 NC_008340.1 KEGG: noc:Noc_0587 hypothetical protein; hypothetical protein 839281 4270515 Mlg_0754 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741598.1 838661 R 187272 CDS YP_741599.1 114319916 4268568 complement(839278..839982) 1 NC_008340.1 PFAM: glycosyl transferase, family 2; KEGG: eba:ebA1112 conserved hypothetical protein, predicted glycosyl transferase 2; glycosyl transferase 839982 4268568 Mlg_0755 Alkalilimnicola ehrlichii MLHE-1 glycosyl transferase YP_741599.1 839278 R 187272 CDS YP_741600.1 114319917 4268569 complement(840059..840724) 1 NC_008340.1 PFAM: Rhodanese domain protein; regulatory protein, ArsR; KEGG: bps:BPSS2118 ArsR family transcriptional regulator; ArsR family transcriptional regulator 840724 4268569 Mlg_0756 Alkalilimnicola ehrlichii MLHE-1 ArsR family transcriptional regulator YP_741600.1 840059 R 187272 CDS YP_741601.1 114319918 4268570 840982..842391 1 NC_008340.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Rubredoxin-type Fe(Cys)4 protein; KEGG: tcx:Tcr_0037 rubredoxin-type Fe(Cys)4 protein; rubredoxin-type Fe(Cys)4 protein 842391 4268570 Mlg_0757 Alkalilimnicola ehrlichii MLHE-1 rubredoxin-type Fe(Cys)4 protein YP_741601.1 840982 D 187272 CDS YP_741602.1 114319919 4268571 complement(842361..843347) 1 NC_008340.1 hypothetical protein 843347 4268571 Mlg_0758 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741602.1 842361 R 187272 CDS YP_741603.1 114319920 4268572 complement(843445..845601) 1 NC_008340.1 KEGG: nmu:Nmul_A1709 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; CHASE domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase 845601 4268572 Mlg_0759 Alkalilimnicola ehrlichii MLHE-1 PAS/PAC sensor-containing diguanylate cyclase YP_741603.1 843445 R 187272 CDS YP_741604.1 114319921 4268573 complement(845721..847208) 1 NC_008340.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; MASE1 domain protein; KEGG: tbd:Tbd_0636 diguanylate cyclase (GGDEF domain); diguanylate cyclase 847208 4268573 Mlg_0760 Alkalilimnicola ehrlichii MLHE-1 diguanylate cyclase YP_741604.1 845721 R 187272 CDS YP_741605.1 114319922 4268575 complement(847540..847896) 1 NC_008340.1 PFAM: regulatory protein, MerR; KEGG: noc:Noc_1147 transcriptional regulatory protein, MerR family; MerR family transcriptional regulator 847896 4268575 Mlg_0761 Alkalilimnicola ehrlichii MLHE-1 MerR family transcriptional regulator YP_741605.1 847540 R 187272 CDS YP_741606.1 114319923 4268576 complement(847871..848176) 1 NC_008340.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit alpha 848176 ihfA 4268576 ihfA Alkalilimnicola ehrlichii MLHE-1 integration host factor subunit alpha YP_741606.1 847871 R 187272 CDS YP_741607.1 114319924 4268577 complement(848181..850574) 1 NC_008340.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 850574 pheT 4268577 pheT Alkalilimnicola ehrlichii MLHE-1 phenylalanyl-tRNA synthetase subunit beta YP_741607.1 848181 R 187272 CDS YP_741608.1 114319925 4268578 complement(850629..851660) 1 NC_008340.1 KEGG: pae:PA2740 phenylalanyl-tRNA synthetase, alpha-subunit; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: phenylalanyl-tRNA synthetase, class IIc; aminoacyl tRNA synthetase, class II domain protein; phenylalanyl-tRNA synthetase subunit alpha 851660 4268578 Mlg_0764 Alkalilimnicola ehrlichii MLHE-1 phenylalanyl-tRNA synthetase subunit alpha YP_741608.1 850629 R 187272 CDS YP_741609.1 114319926 4268579 complement(851847..852206) 1 NC_008340.1 TIGRFAM: ribosomal protein L20; KEGG: hch:HCH_04576 ribosomal protein L20; 50S ribosomal protein L20 852206 4268579 Mlg_0765 Alkalilimnicola ehrlichii MLHE-1 50S ribosomal protein L20 YP_741609.1 851847 R 187272 CDS YP_741610.1 114319927 4268580 complement(852237..852434) 1 NC_008340.1 PFAM: ribosomal protein L35; KEGG: noc:Noc_1142 50S ribosomal protein L35; 50S ribosomal protein L35 852434 rpmI 4268580 rpmI Alkalilimnicola ehrlichii MLHE-1 50S ribosomal protein L35 YP_741610.1 852237 R 187272 CDS YP_741611.1 114319928 4268581 complement(852513..852953) 1 NC_008340.1 TIGRFAM: translation initiation factor IF-3; PFAM: initiation factor 3; KEGG: noc:Noc_1141 initiation factor 3; translation initiation factor 3 852953 4268581 Mlg_0767 Alkalilimnicola ehrlichii MLHE-1 translation initiation factor 3 YP_741611.1 852513 R 187272 CDS YP_741612.1 114319929 4268582 complement(853071..854996) 1 NC_008340.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 854996 thrS 4268582 thrS Alkalilimnicola ehrlichii MLHE-1 threonyl-tRNA synthetase YP_741612.1 853071 R 187272 CDS YP_741613.1 114319930 4268583 complement(855109..856101) 1 NC_008340.1 TIGRFAM: alpha-L-glutamate ligase-like protein; KEGG: ppr:PBPRA1106 hypothetical protein; alpha-L-glutamate ligase 856101 4268583 Mlg_0769 Alkalilimnicola ehrlichii MLHE-1 alpha-L-glutamate ligase YP_741613.1 855109 R 187272 CDS YP_741614.1 114319931 4269587 complement(856101..857621) 1 NC_008340.1 KEGG: csa:Csal_1880 hypothetical protein; hypothetical protein 857621 4269587 Mlg_0770 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741614.1 856101 R 187272 CDS YP_741615.1 114319932 4269588 complement(857632..858432) 1 NC_008340.1 PFAM: protein of unknown function DUF785; KEGG: csa:Csal_1879 protein of unknown function DUF785; hypothetical protein 858432 4269588 Mlg_0771 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741615.1 857632 R 187272 CDS YP_741616.1 114319933 4269589 858649..859374 1 NC_008340.1 PFAM: 20S proteasome, A and B subunits; KEGG: mca:MCA2055 hypothetical protein; 20S proteasome subunits A and B 859374 4269589 Mlg_0772 Alkalilimnicola ehrlichii MLHE-1 20S proteasome subunits A and B YP_741616.1 858649 D 187272 CDS YP_741617.1 114319934 4269590 complement(859391..860449) 1 NC_008340.1 KEGG: hch:HCH_03595 hypothetical protein; hypothetical protein 860449 4269590 Mlg_0773 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741617.1 859391 R 187272 CDS YP_741618.1 114319935 4269591 complement(860446..861381) 1 NC_008340.1 PFAM: protein of unknown function DUF403; KEGG: hch:HCH_00984 hypothetical protein; hypothetical protein 861381 4269591 Mlg_0774 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741618.1 860446 R 187272 CDS YP_741619.1 114319936 4269592 complement(861381..862850) 1 NC_008340.1 PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: mca:MCA2056 hypothetical protein; hypothetical protein 862850 4269592 Mlg_0775 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741619.1 861381 R 187272 CDS YP_741620.1 114319937 4269593 863050..863850 1 NC_008340.1 PFAM: transglutaminase domain protein; KEGG: hch:HCH_03352 transglutaminase-like enzyme, cysteine protease; transglutaminase domain-containing protein 863850 4269593 Mlg_0776 Alkalilimnicola ehrlichii MLHE-1 transglutaminase domain-containing protein YP_741620.1 863050 D 187272 CDS YP_741621.1 114319938 4269594 complement(863853..864323) 1 NC_008340.1 PFAM: Spore coat U domain protein; KEGG: rfe:RF_0707 hypothetical protein; spore coat U domain-containing protein 864323 4269594 Mlg_0777 Alkalilimnicola ehrlichii MLHE-1 spore coat U domain-containing protein YP_741621.1 863853 R 187272 CDS YP_741622.1 114319939 4269595 complement(864320..866656) 1 NC_008340.1 PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: rso:RSc2693 outer membrane usher transmembrane protein; fimbrial biogenesis outer membrane usher protein 866656 4269595 Mlg_0778 Alkalilimnicola ehrlichii MLHE-1 fimbrial biogenesis outer membrane usher protein YP_741622.1 864320 R 187272 CDS YP_741623.1 114319940 4269596 complement(866708..867460) 1 NC_008340.1 KEGG: rso:RSc2694 pili assembly chaperone transmembrane protein; pili assembly chaperone transmembrane protein 867460 4269596 Mlg_0779 Alkalilimnicola ehrlichii MLHE-1 pili assembly chaperone transmembrane protein YP_741623.1 866708 R 187272 CDS YP_741624.1 114319941 4269597 complement(867484..867975) 1 NC_008340.1 PFAM: Spore coat U domain protein; KEGG: ade:Adeh_3602 spore coat U; spore coat U domain-containing protein 867975 4269597 Mlg_0780 Alkalilimnicola ehrlichii MLHE-1 spore coat U domain-containing protein YP_741624.1 867484 R 187272 CDS YP_741625.1 114319942 4269598 868404..870677 1 NC_008340.1 PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: tdn:Tmden_0279 TonB-dependent receptor; TonB-dependent receptor 870677 4269598 Mlg_0781 Alkalilimnicola ehrlichii MLHE-1 TonB-dependent receptor YP_741625.1 868404 D 187272 CDS YP_741626.1 114319943 4269599 870677..871354 1 NC_008340.1 KEGG: dar:Daro_2956 cytochrome c biogenesis protein, transmembrane region; cytochrome c biogenesis protein, transmembrane region 871354 4269599 Mlg_0782 Alkalilimnicola ehrlichii MLHE-1 cytochrome c biogenesis protein, transmembrane region YP_741626.1 870677 D 187272 CDS YP_741627.1 114319944 4269600 871412..872422 1 NC_008340.1 KEGG: tdn:Tmden_0275 polyferredoxin-like; polyferredoxin-like protein 872422 4269600 Mlg_0783 Alkalilimnicola ehrlichii MLHE-1 polyferredoxin-like protein YP_741627.1 871412 D 187272 CDS YP_741628.1 114319945 4269601 872409..873422 1 NC_008340.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: tdn:Tmden_0274 4Fe-4S ferredoxin, iron-sulfur binding; 4Fe-4S ferredoxin 873422 4269601 Mlg_0784 Alkalilimnicola ehrlichii MLHE-1 4Fe-4S ferredoxin YP_741628.1 872409 D 187272 CDS YP_741629.1 114319946 4269602 873419..874681 1 NC_008340.1 PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; KEGG: tdn:Tmden_0273 2-hydroxyglutaryl-CoA dehydratase, D-component; 2-hydroxyglutaryl-CoA dehydratase subunit D 874681 4269602 Mlg_0785 Alkalilimnicola ehrlichii MLHE-1 2-hydroxyglutaryl-CoA dehydratase subunit D YP_741629.1 873419 D 187272 CDS YP_741630.1 114319947 4269603 874678..875502 1 NC_008340.1 TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: ATPase, BadF/BadG/BcrA/BcrD type; KEGG: tdn:Tmden_0272 CoA enzyme activase; CoA-substrate-specific enzyme activase 875502 4269603 Mlg_0786 Alkalilimnicola ehrlichii MLHE-1 CoA-substrate-specific enzyme activase YP_741630.1 874678 D 187272 CDS YP_741631.1 114319948 4269604 complement(875534..876547) 1 NC_008340.1 catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin; 2-oxoglutarate ferredoxin oxidoreductase subunit beta 876547 4269604 Mlg_0787 Alkalilimnicola ehrlichii MLHE-1 2-oxoglutarate ferredoxin oxidoreductase subunit beta YP_741631.1 875534 R 187272 CDS YP_741632.1 114319949 4270551 complement(876544..878430) 1 NC_008340.1 PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: nar:Saro_1757 pyruvate flavodoxin/ferredoxin oxidoreductase-like; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 878430 4270551 Mlg_0788 Alkalilimnicola ehrlichii MLHE-1 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein YP_741632.1 876544 R 187272 CDS YP_741633.1 114319950 4270552 878948..880282 1 NC_008340.1 PFAM: phage integrase; KEGG: vvy:VV1777 integrase; phage integrase 880282 4270552 Mlg_0789 Alkalilimnicola ehrlichii MLHE-1 phage integrase YP_741633.1 878948 D 187272 CDS YP_741634.1 114319951 4270553 880279..880797 1 NC_008340.1 hypothetical protein 880797 4270553 Mlg_0790 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741634.1 880279 D 187272 CDS YP_741635.1 114319952 4270554 881246..883249 1 NC_008340.1 KEGG: ppr:PBPRB1439 hypothetical protein; ATPase-like protein 883249 4270554 Mlg_0791 Alkalilimnicola ehrlichii MLHE-1 ATPase-like protein YP_741635.1 881246 D 187272 CDS YP_741636.1 114319953 4270555 883930..884301 1 NC_008340.1 hypothetical protein 884301 4270555 Mlg_0792 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741636.1 883930 D 187272 CDS YP_741637.1 114319954 4270556 884301..884537 1 NC_008340.1 hypothetical protein 884537 4270556 Mlg_0793 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741637.1 884301 D 187272 CDS YP_741638.1 114319955 4270557 884534..886063 1 NC_008340.1 hypothetical protein 886063 4270557 Mlg_0794 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741638.1 884534 D 187272 CDS YP_741639.1 114319956 4270558 886105..887244 1 NC_008340.1 TIGRFAM: phage major capsid protein, HK97 family; PFAM: phage major capsid protein, HK97; KEGG: sil:SPO2261 major capsid protein, HK97 family; HK97 family phage major capsid protein 887244 4270558 Mlg_0795 Alkalilimnicola ehrlichii MLHE-1 HK97 family phage major capsid protein YP_741639.1 886105 D 187272 CDS YP_741640.1 114319957 4270560 888540..889859 1 NC_008340.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase; KEGG: bbr:BB2925 capsular polysaccharide biosynthesis protein; UDP-glucose/GDP-mannose dehydrogenase 889859 4270560 Mlg_0796 Alkalilimnicola ehrlichii MLHE-1 UDP-glucose/GDP-mannose dehydrogenase YP_741640.1 888540 D 187272 CDS YP_741641.1 114319958 4270561 889899..891380 1 NC_008340.1 KEGG: hch:HCH_02378 hypothetical protein; hypothetical protein 891380 4270561 Mlg_0797 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741641.1 889899 D 187272 CDS YP_741642.1 114319959 4270562 891450..891902 1 NC_008340.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: rso:RSp1019 low molecular weight protein-tyrosine-phosphatase; protein tyrosine phosphatase 891902 4270562 Mlg_0798 Alkalilimnicola ehrlichii MLHE-1 protein tyrosine phosphatase YP_741642.1 891450 D 187272 CDS YP_741643.1 114319960 4270563 891977..893158 1 NC_008340.1 PFAM: polysaccharide export protein; KEGG: neu:NE2279 polysaccharide export protein; polysaccharide export protein 893158 4270563 Mlg_0799 Alkalilimnicola ehrlichii MLHE-1 polysaccharide export protein YP_741643.1 891977 D 187272 CDS YP_741644.1 114319961 4270564 893186..895351 1 NC_008340.1 PFAM: lipopolysaccharide biosynthesis; KEGG: ade:Adeh_4274 tyrosine kinase; hypothetical protein 895351 4270564 Mlg_0800 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741644.1 893186 D 187272 CDS YP_741645.1 114319962 4270565 complement(895275..897281) 1 NC_008340.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: son:SO3171 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein CapD 897281 4270565 Mlg_0801 Alkalilimnicola ehrlichii MLHE-1 polysaccharide biosynthesis protein CapD YP_741645.1 895275 R 187272 CDS YP_741646.1 114319963 4270566 complement(897885..899915) 1 NC_008340.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: psb:Psyr_3636 polysaccharide biosynthesis protein CapD; polysaccharide biosynthesis protein CapD 899915 4270566 Mlg_0802 Alkalilimnicola ehrlichii MLHE-1 polysaccharide biosynthesis protein CapD YP_741646.1 897885 R 187272 CDS YP_741647.1 114319964 4270634 900165..903719 1 NC_008340.1 TIGRFAM: exodeoxyribonuclease V, gamma subunit; PFAM: Exodeoxyribonuclease V, RecC subunit; KEGG: pae:PA4285 exodeoxyribonuclease V gamma chain; DNA helicase/exodeoxyribonuclease V subunit gamma 903719 4270634 Mlg_0803 Alkalilimnicola ehrlichii MLHE-1 DNA helicase/exodeoxyribonuclease V subunit gamma YP_741647.1 900165 D 187272 CDS YP_741648.1 114319965 4270635 903716..907444 1 NC_008340.1 TIGRFAM: exodeoxyribonuclease V, beta subunit; PFAM: UvrD/REP helicase; KEGG: pfl:PFL_0741 exodeoxyribonuclease V, beta subunit; DNA helicase/exodeoxyribonuclease V subunit beta 907444 4270635 Mlg_0804 Alkalilimnicola ehrlichii MLHE-1 DNA helicase/exodeoxyribonuclease V subunit beta YP_741648.1 903716 D 187272 CDS YP_741649.1 114319966 4270636 907437..909548 1 NC_008340.1 TIGRFAM: exodeoxyribonuclease V, alpha subunit; KEGG: pfl:PFL_0742 exodeoxyribonuclease V, alpha subunit; DNA helicase/exodeoxyribonuclease V subunit alpha 909548 4270636 Mlg_0805 Alkalilimnicola ehrlichii MLHE-1 DNA helicase/exodeoxyribonuclease V subunit alpha YP_741649.1 907437 D 187272 CDS YP_741650.1 114319967 4270637 909662..910951 1 NC_008340.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase 910951 4270637 Mlg_0806 Alkalilimnicola ehrlichii MLHE-1 glutamate-1-semialdehyde aminotransferase YP_741650.1 909662 D 187272 CDS YP_741651.1 114319968 4270638 911007..913001 1 NC_008340.1 KEGG: rfr:Rfer_4038 phosphoesterase, PA-phosphatase related; PA-phosphatase-like phosphoesterase 913001 4270638 Mlg_0807 Alkalilimnicola ehrlichii MLHE-1 PA-phosphatase-like phosphoesterase YP_741651.1 911007 D 187272 CDS YP_741652.1 114319969 4270639 complement(913009..913455) 1 NC_008340.1 KEGG: reu:Reut_A1043 hypothetical protein; hypothetical protein 913455 4270639 Mlg_0808 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741652.1 913009 R 187272 CDS YP_741653.1 114319970 4270640 complement(913501..914136) 1 NC_008340.1 KEGG: yps:YPTB2160 endonuclease III; TIGRFAM: endonuclease III; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; SMART: iron-sulfur cluster loop; DNA-(apurinic or apyrimidinic site) lyase/endonuclease III 914136 4270640 Mlg_0809 Alkalilimnicola ehrlichii MLHE-1 DNA-(apurinic or apyrimidinic site) lyase/endonuclease III YP_741653.1 913501 R 187272 CDS YP_741654.1 114319971 4270641 complement(914166..914891) 1 NC_008340.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: cyb:CYB_0748 HAD-superfamily hydrolase, subfamily IA, variant 3; HAD family hydrolase 914891 4270641 Mlg_0810 Alkalilimnicola ehrlichii MLHE-1 HAD family hydrolase YP_741654.1 914166 R 187272 CDS YP_741655.1 114319972 4270642 complement(914888..915574) 1 NC_008340.1 TIGRFAM: electron transport complex, RnfABCDGE type, E subunit; PFAM: RnfA-Nqr electron transport subunit; KEGG: noc:Noc_1170 NADH-ubiquinone oxidoreductase; RnfABCDGE type electron transport complex subunit E 915574 4270642 Mlg_0811 Alkalilimnicola ehrlichii MLHE-1 RnfABCDGE type electron transport complex subunit E YP_741655.1 914888 R 187272 CDS YP_741656.1 114319973 4270643 complement(915806..916468) 1 NC_008340.1 TIGRFAM: electron transport complex, RnfABCDGE type, G subunit; PFAM: FMN-binding domain protein; KEGG: noc:Noc_1171 electron transport complex, RnfABCDGE type, G subunit; RnfABCDGE type electron transport complex subunit G 916468 4270643 Mlg_0812 Alkalilimnicola ehrlichii MLHE-1 RnfABCDGE type electron transport complex subunit G YP_741656.1 915806 R 187272 CDS YP_741657.1 114319974 4270644 complement(916465..917406) 1 NC_008340.1 TIGRFAM: electron transport complex, RnfABCDGE type, D subunit; PFAM: NQR2 and RnfD family protein; KEGG: noc:Noc_1172 electron transport complex, RnfABCDGE type, D subunit; RnfABCDGE type electron transport complex subunit D 917406 4270644 Mlg_0813 Alkalilimnicola ehrlichii MLHE-1 RnfABCDGE type electron transport complex subunit D YP_741657.1 916465 R 187272 CDS YP_741658.1 114319975 4270645 complement(917457..919004) 1 NC_008340.1 part of membrane-bound complex thought to be involved in electron transport to nitrogen; electron transport complex protein RnfC 919004 4270645 Mlg_0814 Alkalilimnicola ehrlichii MLHE-1 electron transport complex protein RnfC YP_741658.1 917457 R 187272 CDS YP_741659.1 114319976 4270646 complement(919001..919561) 1 NC_008340.1 TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Fe-S cluster domain protein; KEGG: sde:Sde_2400 NADH:ubiquinone oxidoreductase, subunit RnfB; RnfABCDGE type electron transport complex subunit B 919561 4270646 Mlg_0815 Alkalilimnicola ehrlichii MLHE-1 RnfABCDGE type electron transport complex subunit B YP_741659.1 919001 R 187272 CDS YP_741660.1 114319977 4270647 complement(919604..920185) 1 NC_008340.1 TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; PFAM: RnfA-Nqr electron transport subunit; KEGG: noc:Noc_0970 electron transport complex, RnfABCDGE type, A subunit; RnfABCDGE type electron transport complex subunit A 920185 4270647 Mlg_0816 Alkalilimnicola ehrlichii MLHE-1 RnfABCDGE type electron transport complex subunit A YP_741660.1 919604 R 187272 CDS YP_741661.1 114319978 4270648 complement(920317..922344) 1 NC_008340.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 922344 metG 4270648 metG Alkalilimnicola ehrlichii MLHE-1 methionyl-tRNA synthetase YP_741661.1 920317 R 187272 CDS YP_741662.1 114319979 4270649 922479..922853 1 NC_008340.1 TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein; KEGG: mag:amb3406 integral membrane protein possibly involved in chromosome condensation; camphor resistance protein CrcB 922853 4270649 Mlg_0818 Alkalilimnicola ehrlichii MLHE-1 camphor resistance protein CrcB YP_741662.1 922479 D 187272 CDS YP_741663.1 114319980 4270650 922850..923215 1 NC_008340.1 TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein; KEGG: nwi:Nwi_0141 camphor resistance CrcB protein; camphor resistance protein CrcB 923215 4270650 Mlg_0819 Alkalilimnicola ehrlichii MLHE-1 camphor resistance protein CrcB YP_741663.1 922850 D 187272 CDS YP_741664.1 114319981 4270651 complement(924246..926264) 1 NC_008340.1 PFAM: peptidase M48, Ste24p; KEGG: noc:Noc_1831 peptidase M48, Ste24p; peptidase M48, Ste24p 926264 4270651 Mlg_0820 Alkalilimnicola ehrlichii MLHE-1 peptidase M48, Ste24p YP_741664.1 924246 R 187272 CDS YP_741665.1 114319982 4268246 complement(926428..927300) 1 NC_008340.1 PFAM: Bacitracin resistance protein BacA; KEGG: mta:Moth_0571 undecaprenol kinase; undecaprenyl-diphosphatase 927300 4268246 Mlg_0821 Alkalilimnicola ehrlichii MLHE-1 undecaprenyl-diphosphatase YP_741665.1 926428 R 187272 CDS YP_741666.1 114319983 4268247 928093..929172 1 NC_008340.1 PFAM: porin, Gram-negative type; KEGG: tbd:Tbd_0448 outer membrane protein (porin); porin 929172 4268247 Mlg_0822 Alkalilimnicola ehrlichii MLHE-1 porin YP_741666.1 928093 D 187272 CDS YP_741667.1 114319984 4268248 929794..930639 1 NC_008340.1 PFAM: CBS domain containing protein; KEGG: mma:MM1660 MG2+ transporter MGTE; CBS domain-containing protein 930639 4268248 Mlg_0823 Alkalilimnicola ehrlichii MLHE-1 CBS domain-containing protein YP_741667.1 929794 D 187272 CDS YP_741668.1 114319985 4268249 930699..932063 1 NC_008340.1 TIGRFAM: magnesium transporter; PFAM: CBS domain containing protein; MgtE integral membrane region; MgtE intracellular region; KEGG: tdn:Tmden_1342 divalent cation transporter; magnesium transporter 932063 4268249 Mlg_0824 Alkalilimnicola ehrlichii MLHE-1 magnesium transporter YP_741668.1 930699 D 187272 CDS YP_741669.1 114319986 4268250 932151..932789 1 NC_008340.1 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase 932789 dcd 4268250 dcd Alkalilimnicola ehrlichii MLHE-1 deoxycytidine triphosphate deaminase YP_741669.1 932151 D 187272 CDS YP_741670.1 114319987 4268251 complement(932821..933198) 1 NC_008340.1 TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: yps:YPTB2791 arsenate reductase; arsenate reductase 933198 4268251 Mlg_0826 Alkalilimnicola ehrlichii MLHE-1 arsenate reductase YP_741670.1 932821 R 187272 CDS YP_741671.1 114319988 4268252 complement(933247..936660) 1 NC_008340.1 KEGG: sru:SRU_2006 hypothetical protein; hypothetical protein 936660 4268252 Mlg_0827 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741671.1 933247 R 187272 CDS YP_741672.1 114319989 4268253 complement(936657..937943) 1 NC_008340.1 PFAM: metallophosphoesterase; KEGG: sru:SRU_2007 Ser/Thr protein phosphatase; metallophosphoesterase 937943 4268253 Mlg_0828 Alkalilimnicola ehrlichii MLHE-1 metallophosphoesterase YP_741672.1 936657 R 187272 CDS YP_741673.1 114319990 4268254 938144..938806 1 NC_008340.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rpc:RPC_1920 peroxidase; 1-Cys peroxiredoxin 938806 4268254 Mlg_0829 Alkalilimnicola ehrlichii MLHE-1 1-Cys peroxiredoxin YP_741673.1 938144 D 187272 CDS YP_741674.1 114319991 4268255 938912..939778 1 NC_008340.1 PFAM: beta-lactamase domain protein; KEGG: sil:SPO1030 metallo-beta-lactamase; beta-lactamase domain-containing protein 939778 4268255 Mlg_0830 Alkalilimnicola ehrlichii MLHE-1 beta-lactamase domain-containing protein YP_741674.1 938912 D 187272 CDS YP_741675.1 114319992 4268256 939900..940427 1 NC_008340.1 KEGG: mag:amb0248 6-pyruvoyl-tetrahydropterin synthase; 6-pyruvoyl tetrahydrobiopterin synthase 940427 4268256 Mlg_0831 Alkalilimnicola ehrlichii MLHE-1 6-pyruvoyl tetrahydrobiopterin synthase YP_741675.1 939900 D 187272 CDS YP_741676.1 114319993 4268257 complement(940438..943509) 1 NC_008340.1 KEGG: rfr:Rfer_3395 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 943509 4268257 Mlg_0832 Alkalilimnicola ehrlichii MLHE-1 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_741676.1 940438 R 187272 CDS YP_741677.1 114319994 4268259 complement(943733..944701) 1 NC_008340.1 PFAM: Polyprenyl synthetase; KEGG: noc:Noc_3032 trans-hexaprenyltranstransferase; trans-hexaprenyltranstransferase 944701 4268259 Mlg_0833 Alkalilimnicola ehrlichii MLHE-1 trans-hexaprenyltranstransferase YP_741677.1 943733 R 187272 CDS YP_741678.1 114319995 4268260 944951..945376 1 NC_008340.1 PFAM: UspA domain protein; KEGG: vch:VC0428 hypothetical protein; UspA domain-containing protein 945376 4268260 Mlg_0834 Alkalilimnicola ehrlichii MLHE-1 UspA domain-containing protein YP_741678.1 944951 D 187272 CDS YP_741679.1 114319996 4268261 945428..947152 1 NC_008340.1 TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; KEGG: csa:Csal_0980 choline/carnitine/betaine transport; choline/carnitine/betaine transporter 947152 4268261 Mlg_0835 Alkalilimnicola ehrlichii MLHE-1 choline/carnitine/betaine transporter YP_741679.1 945428 D 187272 CDS YP_741680.1 114319997 4270773 complement(947249..947971) 1 NC_008340.1 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 947971 4270773 Mlg_0836 Alkalilimnicola ehrlichii MLHE-1 DNA polymerase III subunit epsilon YP_741680.1 947249 R 187272 CDS YP_741681.1 114319998 4270774 complement(947985..949874) 1 NC_008340.1 PFAM: cyclic nucleotide-binding; CBS domain containing protein; protein of unknown function DUF294, nucleotidyltransferase KEGG: csa:Csal_0978 cyclic nucleotide-binding domain (cNMP-BD) protein; cyclic nucleotide-binding protein 949874 4270774 Mlg_0837 Alkalilimnicola ehrlichii MLHE-1 cyclic nucleotide-binding protein YP_741681.1 947985 R 187272 CDS YP_741682.1 114319999 4270775 950150..952243 1 NC_008340.1 PFAM: Rhs element Vgr protein; KEGG: eca:ECA2104 VgrG protein; Rhs element Vgr protein 952243 4270775 Mlg_0838 Alkalilimnicola ehrlichii MLHE-1 Rhs element Vgr protein YP_741682.1 950150 D 187272 CDS YP_741683.1 114320000 4270776 952246..952767 1 NC_008340.1 KEGG: pst:PSPTO2537 hypothetical protein; hypothetical protein 952767 4270776 Mlg_0839 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741683.1 952246 D 187272 CDS YP_741684.1 114320001 4270777 952764..955370 1 NC_008340.1 hypothetical protein 955370 4270777 Mlg_0840 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741684.1 952764 D 187272 CDS YP_741685.1 114320002 4270778 955373..956389 1 NC_008340.1 KEGG: xoo:XOO3467 hypothetical protein; hypothetical protein 956389 4270778 Mlg_0841 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741685.1 955373 D 187272 CDS YP_741686.1 114320003 4270779 956389..958446 1 NC_008340.1 hypothetical protein 958446 4270779 Mlg_0842 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741686.1 956389 D 187272 CDS YP_741687.1 114320004 4270780 958467..959801 1 NC_008340.1 hypothetical protein 959801 4270780 Mlg_0843 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741687.1 958467 D 187272 CDS YP_741688.1 114320005 4270781 959928..960353 1 NC_008340.1 hypothetical protein 960353 4270781 Mlg_0844 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741688.1 959928 D 187272 CDS YP_741689.1 114320006 4270782 960947..961261 1 NC_008340.1 PFAM: ribosomal protein L21; KEGG: vvy:VV0470 ribosomal protein L21; 50S ribosomal protein L21 961261 rplU 4270782 rplU Alkalilimnicola ehrlichii MLHE-1 50S ribosomal protein L21 YP_741689.1 960947 D 187272 CDS YP_741690.1 114320007 4270783 961281..961541 1 NC_008340.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 961541 rpmA 4270783 rpmA Alkalilimnicola ehrlichii MLHE-1 50S ribosomal protein L27 YP_741690.1 961281 D 187272 CDS YP_741691.1 114320008 4270784 961637..962713 1 NC_008340.1 PFAM: GTP-binding protein, HSR1-related; GTP1/OBG sub domain protein; KEGG: csa:Csal_0476 GTP1/OBG subdomain; GTP1/OBG domain-containing protein 962713 4270784 Mlg_0847 Alkalilimnicola ehrlichii MLHE-1 GTP1/OBG domain-containing protein YP_741691.1 961637 D 187272 CDS YP_741692.1 114320009 4270785 962710..963852 1 NC_008340.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 963852 4270785 Mlg_0848 Alkalilimnicola ehrlichii MLHE-1 gamma-glutamyl kinase YP_741692.1 962710 D 187272 CDS YP_741693.1 114320010 4270786 complement(963994..964260) 1 NC_008340.1 PFAM: ribosomal protein S20; KEGG: pfo:Pfl_4855 ribosomal protein S20p; 30S ribosomal protein S20 964260 4270786 Mlg_0849 Alkalilimnicola ehrlichii MLHE-1 30S ribosomal protein S20 YP_741693.1 963994 R 187272 CDS YP_741694.1 114320011 4270787 964399..965967 1 NC_008340.1 TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; KEGG: noc:Noc_3038 virulence factor MviN-like; integral membrane protein MviN 965967 4270787 Mlg_0850 Alkalilimnicola ehrlichii MLHE-1 integral membrane protein MviN YP_741694.1 964399 D 187272 CDS YP_741695.1 114320012 4270788 966012..966980 1 NC_008340.1 TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase / FAD synthetase; KEGG: sgl:SG0413 riboflavin biosynthesis protein; riboflavin kinase/FMN adenylyltransferase 966980 4270788 Mlg_0851 Alkalilimnicola ehrlichii MLHE-1 riboflavin kinase/FMN adenylyltransferase YP_741695.1 966012 D 187272 CDS YP_741696.1 114320013 4270789 966977..969802 1 NC_008340.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 969802 ileS 4270789 ileS Alkalilimnicola ehrlichii MLHE-1 isoleucyl-tRNA synthetase YP_741696.1 966977 D 187272 CDS YP_741697.1 114320014 4270790 969813..970280 1 NC_008340.1 TIGRFAM: lipoprotein signal peptidase; PFAM: peptidase A8, signal peptidase II; KEGG: pcr:Pcryo_0401 lipoprotein signal peptidase; signal peptidase II 970280 4270790 Mlg_0853 Alkalilimnicola ehrlichii MLHE-1 signal peptidase II YP_741697.1 969813 D 187272 CDS YP_741698.1 114320015 4268498 970351..971301 1 NC_008340.1 KEGG: ppu:PP0606 hydroxymethylbutenyl pyrophosphate reductase; TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 971301 4268498 Mlg_0854 Alkalilimnicola ehrlichii MLHE-1 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_741698.1 970351 D 187272 CDS YP_741699.1 114320016 4268499 complement(971804..972184) 1 NC_008340.1 KEGG: csa:Csal_0493 methylation; pilus assembly protein 972184 4268499 Mlg_0855 Alkalilimnicola ehrlichii MLHE-1 pilus assembly protein YP_741699.1 971804 R 187272 CDS YP_741700.1 114320017 4268500 972453..972947 1 NC_008340.1 KEGG: pol:Bpro_2876 methylation; pilus assembly protein 972947 4268500 Mlg_0856 Alkalilimnicola ehrlichii MLHE-1 pilus assembly protein YP_741700.1 972453 D 187272 CDS YP_741701.1 114320018 4268501 973036..973494 1 NC_008340.1 TIGRFAM: general secretion pathway protein H; KEGG: rme:Rmet_5685 pilus assembly protein FimT; general secretion pathway protein H 973494 4268501 Mlg_0857 Alkalilimnicola ehrlichii MLHE-1 general secretion pathway protein H YP_741701.1 973036 D 187272 CDS YP_741702.1 114320019 4268502 973491..974003 1 NC_008340.1 TIGRFAM: type IV pilus modification protein PilV; KEGG: noc:Noc_2271 type IV fimbrial biogenesis protein PilV; type IV pilus modification protein PilV 974003 4268502 Mlg_0858 Alkalilimnicola ehrlichii MLHE-1 type IV pilus modification protein PilV YP_741702.1 973491 D 187272 CDS YP_741703.1 114320020 4268503 974013..974651 1 NC_008340.1 TIGRFAM: Prepilin-type cleavage/methylation-like; KEGG: pst:PSPTO0813 type IV pilus assembly protein PilW; prepilin-type cleavage/methylation-like protein 974651 4268503 Mlg_0859 Alkalilimnicola ehrlichii MLHE-1 prepilin-type cleavage/methylation-like protein YP_741703.1 974013 D 187272 CDS YP_741704.1 114320021 4268504 974664..975881 1 NC_008340.1 KEGG: noc:Noc_2273 type IV pilus assembly protein PilX; Tfp pilus assembly protein PilX-like protein 975881 4268504 Mlg_0860 Alkalilimnicola ehrlichii MLHE-1 Tfp pilus assembly protein PilX-like protein YP_741704.1 974664 D 187272 CDS YP_741705.1 114320022 4268505 975929..977143 1 NC_008340.1 Tfp pilus assembly protein PilX-like protein 977143 4268505 Mlg_0861 Alkalilimnicola ehrlichii MLHE-1 Tfp pilus assembly protein PilX-like protein YP_741705.1 975929 D 187272 CDS YP_741706.1 114320023 4268506 complement(977153..978019) 1 NC_008340.1 catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine; phosphatidylserine decarboxylase 978019 psd 4268506 psd Alkalilimnicola ehrlichii MLHE-1 phosphatidylserine decarboxylase YP_741706.1 977153 R 187272 CDS YP_741707.1 114320024 4268507 978105..978428 1 NC_008340.1 PFAM: DNA polymerase, beta domain protein region; KEGG: eba:ebA5915 hypothetical protein; DNA polymerase subunit beta 978428 4268507 Mlg_0863 Alkalilimnicola ehrlichii MLHE-1 DNA polymerase subunit beta YP_741707.1 978105 D 187272 CDS YP_741708.1 114320025 4268508 978425..978943 1 NC_008340.1 KEGG: cch:Cag_0152 hypothetical protein; hypothetical protein 978943 4268508 Mlg_0864 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741708.1 978425 D 187272 CDS YP_741709.1 114320026 4268509 complement(978931..979554) 1 NC_008340.1 PFAM: electron transport protein SCO1/SenC; KEGG: son:SO4615 SCO1/SenC family protein; electron transport protein SCO1/SenC 979554 4268509 Mlg_0865 Alkalilimnicola ehrlichii MLHE-1 electron transport protein SCO1/SenC YP_741709.1 978931 R 187272 CDS YP_741710.1 114320027 4268510 979652..980581 1 NC_008340.1 involved in methylation of ribosomal protein L3; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 980581 4268510 Mlg_0866 Alkalilimnicola ehrlichii MLHE-1 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase YP_741710.1 979652 D 187272 CDS YP_741711.1 114320028 4268511 980603..981886 1 NC_008340.1 PFAM: TPR repeat-containing protein; peptidase M48, Ste24p; SMART: Tetratricopeptide domain protein; KEGG: noc:Noc_0402 peptidase M48, Ste24p; peptidase M48, Ste24p 981886 4268511 Mlg_0867 Alkalilimnicola ehrlichii MLHE-1 peptidase M48, Ste24p YP_741711.1 980603 D 187272 CDS YP_741712.1 114320029 4268512 complement(982409..983026) 1 NC_008340.1 KEGG: noc:Noc_0799 hypothetical protein; hypothetical protein 983026 4268512 Mlg_0868 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741712.1 982409 R 187272 CDS YP_741713.1 114320030 4268513 complement(983133..985169) 1 NC_008340.1 KEGG: noc:Noc_0798 hypothetical protein; hypothetical protein 985169 4268513 Mlg_0869 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741713.1 983133 R 187272 CDS YP_741714.1 114320031 4268514 985292..987127 1 NC_008340.1 TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; KEGG: mca:MCA1868 ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase RecQ 987127 4268514 Mlg_0870 Alkalilimnicola ehrlichii MLHE-1 ATP-dependent DNA helicase RecQ YP_741714.1 985292 D 187272 CDS YP_741715.1 114320032 4269692 987140..987457 1 NC_008340.1 hypothetical protein 987457 4269692 Mlg_0871 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741715.1 987140 D 187272 CDS YP_741716.1 114320033 4269693 complement(987478..988404) 1 NC_008340.1 PFAM: Auxin Efflux Carrier; KEGG: rru:Rru_A3182 auxin efflux carrier; auxin efflux carrier 988404 4269693 Mlg_0872 Alkalilimnicola ehrlichii MLHE-1 auxin efflux carrier YP_741716.1 987478 R 187272 CDS YP_741717.1 114320034 4269694 complement(988516..990789) 1 NC_008340.1 TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: csa:Csal_2409 TRAP transporter, 4TM/12TM fusion protein; TRAP transporter, 4TM/12TM fusion protein 990789 4269694 Mlg_0873 Alkalilimnicola ehrlichii MLHE-1 TRAP transporter, 4TM/12TM fusion protein YP_741717.1 988516 R 187272 CDS YP_741718.1 114320035 4269695 complement(990946..991932) 1 NC_008340.1 TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: csa:Csal_2408 TRAP transporter solute receptor, TAXI family; TRAP transporter solute receptor TAXI family protein 991932 4269695 Mlg_0874 Alkalilimnicola ehrlichii MLHE-1 TRAP transporter solute receptor TAXI family protein YP_741718.1 990946 R 187272 CDS YP_741719.1 114320036 4269696 complement(992236..993687) 1 NC_008340.1 PFAM: aldehyde dehydrogenase; KEGG: eba:ebA2996 succinate-semialdehyde dehydrogenase; succinate-semialdehyde dehydrogenase (NAD(P)(+)) 993687 4269696 Mlg_0875 Alkalilimnicola ehrlichii MLHE-1 succinate-semialdehyde dehydrogenase (NAD(P)(+)) YP_741719.1 992236 R 187272 CDS YP_741720.1 114320037 4269697 complement(993753..994745) 1 NC_008340.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: sma:SAV5233 NAD-binding protein; D-isomer specific 2-hydroxyacid dehydrogenase 994745 4269697 Mlg_0876 Alkalilimnicola ehrlichii MLHE-1 D-isomer specific 2-hydroxyacid dehydrogenase YP_741720.1 993753 R 187272 CDS YP_741721.1 114320038 4269698 994941..996194 1 NC_008340.1 PFAM: aminotransferase, class I and II; KEGG: tko:TK2268 aspartate aminotransferase; aminotransferase 996194 4269698 Mlg_0877 Alkalilimnicola ehrlichii MLHE-1 aminotransferase YP_741721.1 994941 D 187272 CDS YP_741722.1 114320039 4269699 996548..998869 1 NC_008340.1 PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: eli:ELI_04405 outer membrane receptor protein; TonB-dependent receptor 998869 4269699 Mlg_0878 Alkalilimnicola ehrlichii MLHE-1 TonB-dependent receptor YP_741722.1 996548 D 187272 CDS YP_741723.1 114320040 4269700 999037..999504 1 NC_008340.1 TIGRFAM: uncharacterized domain 1; PFAM: thioesterase superfamily protein; KEGG: hch:HCH_04946 uncharacterized protein, possibly involved in aromatic compounds catabolism; hypothetical protein 999504 4269700 Mlg_0879 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741723.1 999037 D 187272 CDS YP_741724.1 114320041 4269701 999501..999953 1 NC_008340.1 PFAM: thioesterase superfamily protein; KEGG: ppu:PP4180 hypothetical protein; thioesterase 999953 4269701 Mlg_0880 Alkalilimnicola ehrlichii MLHE-1 thioesterase YP_741724.1 999501 D 187272 CDS YP_741725.1 114320042 4269702 complement(1000035..1000658) 1 NC_008340.1 PFAM: protein of unknown function DUF1043; KEGG: sgl:SG0214 hypothetical protein; hypothetical protein 1000658 4269702 Mlg_0881 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741725.1 1000035 R 187272 CDS YP_741726.1 114320043 4269703 complement(1000747..1003920) 1 NC_008340.1 PFAM: acriflavin resistance protein; KEGG: ana:alr5294 probable cation efflux system protein; acriflavin resistance protein 1003920 4269703 Mlg_0882 Alkalilimnicola ehrlichii MLHE-1 acriflavin resistance protein YP_741726.1 1000747 R 187272 CDS YP_741727.1 114320044 4269704 complement(1003917..1005008) 1 NC_008340.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: eba:ebA7103 HlyD-like secretion protein; RND family efflux transporter MFP subunit 1005008 4269704 Mlg_0883 Alkalilimnicola ehrlichii MLHE-1 RND family efflux transporter MFP subunit YP_741727.1 1003917 R 187272 CDS YP_741728.1 114320045 4269705 1005144..1005497 1 NC_008340.1 PFAM: ribosomal protein S16; KEGG: csa:Csal_3016 ribosomal protein S16; 30S ribosomal protein S16 1005497 4269705 Mlg_0884 Alkalilimnicola ehrlichii MLHE-1 30S ribosomal protein S16 YP_741728.1 1005144 D 187272 CDS YP_741729.1 114320046 4269706 1005514..1006026 1 NC_008340.1 TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein; KEGG: noc:Noc_2259 16S rRNA processing protein RimM; 16S rRNA-processing protein RimM 1006026 4269706 Mlg_0885 Alkalilimnicola ehrlichii MLHE-1 16S rRNA-processing protein RimM YP_741729.1 1005514 D 187272 CDS YP_741730.1 114320047 4269707 1006023..1006826 1 NC_008340.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 1006826 trmD 4269707 trmD Alkalilimnicola ehrlichii MLHE-1 tRNA (guanine-N(1)-)-methyltransferase YP_741730.1 1006023 D 187272 CDS YP_741731.1 114320048 4269708 1006849..1007202 1 NC_008340.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 1007202 rplS 4269708 rplS Alkalilimnicola ehrlichii MLHE-1 50S ribosomal protein L19 YP_741731.1 1006849 D 187272 CDS YP_741732.1 114320049 4269709 complement(1007412..1007891) 1 NC_008340.1 PFAM: FlgN family protein; KEGG: hch:HCH_04722 flagella synthesis protein FlgN; FlgN family protein 1007891 4269709 Mlg_0888 Alkalilimnicola ehrlichii MLHE-1 FlgN family protein YP_741732.1 1007412 R 187272 CDS YP_741733.1 114320050 4269033 complement(1007934..1008254) 1 NC_008340.1 PFAM: Anti-sigma-28 factor, FlgM family protein; KEGG: pae:PA3351 negative regulator of flagellin synthesis FlgM; anti-sigma-28 factor, FlgM 1008254 4269033 Mlg_0889 Alkalilimnicola ehrlichii MLHE-1 anti-sigma-28 factor, FlgM YP_741733.1 1007934 R 187272 CDS YP_741734.1 114320051 4269034 complement(1008406..1009122) 1 NC_008340.1 KEGG: noc:Noc_2683 flageller protein FlgA; flageller protein FlgA 1009122 4269034 Mlg_0890 Alkalilimnicola ehrlichii MLHE-1 flageller protein FlgA YP_741734.1 1008406 R 187272 CDS YP_741735.1 114320052 4269035 1009365..1010303 1 NC_008340.1 PFAM: response regulator receiver; CheW domain protein; KEGG: pae:PA3349 probable chemotaxis protein; response regulator receiver modulated CheW protein 1010303 4269035 Mlg_0891 Alkalilimnicola ehrlichii MLHE-1 response regulator receiver modulated CheW protein YP_741735.1 1009365 D 187272 CDS YP_741736.1 114320053 4269036 1010362..1011189 1 NC_008340.1 PFAM: MCP methyltransferase, CheR-type; Methyltransferase type 11; Methyltransferase type 12; KEGG: pae:PA3348 probable chemotaxis protein methyltransferase; chemotaxis protein CheR 1011189 4269036 Mlg_0892 Alkalilimnicola ehrlichii MLHE-1 chemotaxis protein CheR YP_741736.1 1010362 D 187272 CDS YP_741737.1 114320054 4269037 1011494..1011898 1 NC_008340.1 TIGRFAM: flagellar basal-body rod protein FlgB; KEGG: noc:Noc_2378 flagellar basal-body rod protein FlgB; flagellar basal-body rod protein FlgB 1011898 4269037 Mlg_0893 Alkalilimnicola ehrlichii MLHE-1 flagellar basal-body rod protein FlgB YP_741737.1 1011494 D 187272 CDS YP_741738.1 114320055 4269038 1011913..1012368 1 NC_008340.1 TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: cps:CPS_1478 flagellar basal-body rod protein FlgC; flagellar basal body rod protein FlgC 1012368 4269038 Mlg_0894 Alkalilimnicola ehrlichii MLHE-1 flagellar basal body rod protein FlgC YP_741738.1 1011913 D 187272 CDS YP_741739.1 114320056 4269039 1012419..1013087 1 NC_008340.1 PFAM: flagellar hook capping protein; KEGG: hch:HCH_04480 flagellar hook capping protein; flagellar hook capping protein 1013087 4269039 Mlg_0895 Alkalilimnicola ehrlichii MLHE-1 flagellar hook capping protein YP_741739.1 1012419 D 187272 CDS YP_741740.1 114320057 4269040 1013116..1014408 1 NC_008340.1 PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; KEGG: xcb:XC_2237 flagellar biosynthesis, hook protein; flagellar basal body FlaE domain-containing protein 1014408 4269040 Mlg_0896 Alkalilimnicola ehrlichii MLHE-1 flagellar basal body FlaE domain-containing protein YP_741740.1 1013116 D 187272 CDS YP_741741.1 114320058 4269041 1014462..1015202 1 NC_008340.1 TIGRFAM: flagellar basal-body rod protein FlgF; KEGG: noc:Noc_2374 protein of unknown function DUF1078; flagellar basal body rod protein FlgF 1015202 4269041 Mlg_0897 Alkalilimnicola ehrlichii MLHE-1 flagellar basal body rod protein FlgF YP_741741.1 1014462 D 187272 CDS YP_741742.1 114320059 4269042 1015644..1016429 1 NC_008340.1 TIGRFAM: flagellar basal-body rod protein FlgG; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: noc:Noc_2373 hypothetical protein; flagellar basal-body rod protein FlgG 1016429 4269042 Mlg_0898 Alkalilimnicola ehrlichii MLHE-1 flagellar basal-body rod protein FlgG YP_741742.1 1015644 D 187272 CDS YP_741743.1 114320060 4269043 1016441..1017115 1 NC_008340.1 PFAM: flagellar L-ring protein; KEGG: pae:PA1083 flagellar L-ring protein precursor FlgH; flagellar L-ring protein 1017115 4269043 Mlg_0899 Alkalilimnicola ehrlichii MLHE-1 flagellar L-ring protein YP_741743.1 1016441 D 187272 CDS YP_741744.1 114320061 4269044 1017134..1018264 1 NC_008340.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring biosynthesis protein FlgA 1018264 flgI 4269044 flgI Alkalilimnicola ehrlichii MLHE-1 flagellar basal body P-ring biosynthesis protein FlgA YP_741744.1 1017134 D 187272 CDS YP_741745.1 114320062 4269045 1018274..1019389 1 NC_008340.1 KEGG: hch:HCH_04474 muramidase (flagellum-specific); TIGRFAM: flagellar rod assembly protein/muramidase FlgJ; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; SMART: Lysozyme subfamily 2; flagellar rod assembly protein/muramidase FlgJ 1019389 4269045 Mlg_0901 Alkalilimnicola ehrlichii MLHE-1 flagellar rod assembly protein/muramidase FlgJ YP_741745.1 1018274 D 187272 CDS YP_741746.1 114320063 4269046 1019474..1021561 1 NC_008340.1 TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: noc:Noc_2369 hypothetical protein; flagellar hook-associated protein FlgK 1021561 4269046 Mlg_0902 Alkalilimnicola ehrlichii MLHE-1 flagellar hook-associated protein FlgK YP_741746.1 1019474 D 187272 CDS YP_741747.1 114320064 4269047 1021568..1022794 1 NC_008340.1 TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; KEGG: noc:Noc_2368 flagellin-like; flagellar hook-associated protein 3 1022794 4269047 Mlg_0903 Alkalilimnicola ehrlichii MLHE-1 flagellar hook-associated protein 3 YP_741747.1 1021568 D 187272 CDS YP_741748.1 114320065 4269048 complement(1022791..1023456) 1 NC_008340.1 PFAM: HhH-GPD family protein; SMART: iron-sulfur cluster loop; KEGG: det:DET1612 DNA repair protein, HhH-GPD family; HhH-GPD family protein 1023456 4269048 Mlg_0904 Alkalilimnicola ehrlichii MLHE-1 HhH-GPD family protein YP_741748.1 1022791 R 187272 CDS YP_741749.1 114320066 4269049 complement(1023465..1024223) 1 NC_008340.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: csa:Csal_1856 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1024223 4269049 Mlg_0905 Alkalilimnicola ehrlichii MLHE-1 short-chain dehydrogenase/reductase SDR YP_741749.1 1023465 R 187272 CDS YP_741750.1 114320067 4269291 complement(1024237..1025091) 1 NC_008340.1 PFAM: Squalene/phytoene synthase; KEGG: noc:Noc_1042 squalene/phytoene synthase; squalene/phytoene synthase 1025091 4269291 Mlg_0906 Alkalilimnicola ehrlichii MLHE-1 squalene/phytoene synthase YP_741750.1 1024237 R 187272 CDS YP_741751.1 114320068 4269292 1025247..1026548 1 NC_008340.1 KEGG: csa:Csal_1112 hypothetical protein; hypothetical protein 1026548 4269292 Mlg_0907 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741751.1 1025247 D 187272 CDS YP_741752.1 114320069 4269293 1026548..1028590 1 NC_008340.1 PFAM: peptidase S15; X-Pro dipeptidyl-peptidase C-terminal domain protein; KEGG: csa:Csal_1111 peptidase S15; peptidase S15 1028590 4269293 Mlg_0908 Alkalilimnicola ehrlichii MLHE-1 peptidase S15 YP_741752.1 1026548 D 187272 CDS YP_741753.1 114320070 4269294 complement(1028587..1029255) 1 NC_008340.1 KEGG: rme:Rmet_0710 phosphoglycolate phosphatase; TIGRFAM: phosphoglycolate phosphatase ; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; phosphoglycolate phosphatase 1029255 4269294 Mlg_0909 Alkalilimnicola ehrlichii MLHE-1 phosphoglycolate phosphatase YP_741753.1 1028587 R 187272 CDS YP_741754.1 114320071 4269295 complement(1029255..1029998) 1 NC_008340.1 KEGG: csa:Csal_1858 ubiquinone biosynthesis O-methyltransferase; TIGRFAM: ubiquinone biosynthesis O-methyltransferase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; 3-demethylubiquinone-9 3-methyltransferase 1029998 4269295 Mlg_0910 Alkalilimnicola ehrlichii MLHE-1 3-demethylubiquinone-9 3-methyltransferase YP_741754.1 1029255 R 187272 CDS YP_741755.1 114320072 4269296 complement(1029991..1031319) 1 NC_008340.1 Catalyzes the hydrolytic cleavage of a carbon-halogen bond in N-ethylammeline; N-ethylammeline chlorohydrolase 1031319 4269296 Mlg_0911 Alkalilimnicola ehrlichii MLHE-1 N-ethylammeline chlorohydrolase YP_741755.1 1029991 R 187272 CDS YP_741756.1 114320073 4269297 1031543..1032064 1 NC_008340.1 PFAM: shikimate kinase; KEGG: sde:Sde_1230 TonB-dependent receptor; shikimate kinase 1032064 4269297 Mlg_0912 Alkalilimnicola ehrlichii MLHE-1 shikimate kinase YP_741756.1 1031543 D 187272 CDS YP_741757.1 114320074 4269298 1032152..1033192 1 NC_008340.1 KEGG: noc:Noc_2293 initiation factor 2B alpha/beta/delta; TIGRFAM: eIF-2B alpha/beta/delta-related uncharacterized proteins; PFAM: initiation factor 2B related; translation initiation factor 2B subunit I 1033192 4269298 Mlg_0913 Alkalilimnicola ehrlichii MLHE-1 translation initiation factor 2B subunit I YP_741757.1 1032152 D 187272 CDS YP_741758.1 114320075 4269299 1033246..1034658 1 NC_008340.1 catalyzes the conversion of NADPH to NADH; soluble pyridine nucleotide transhydrogenase 1034658 4269299 Mlg_0914 Alkalilimnicola ehrlichii MLHE-1 soluble pyridine nucleotide transhydrogenase YP_741758.1 1033246 D 187272 CDS YP_741759.1 114320076 4269300 complement(1034776..1035429) 1 NC_008340.1 PFAM: OmpW family protein; KEGG: bbr:BB4842 outer membrane protein; OmpW family protein 1035429 4269300 Mlg_0915 Alkalilimnicola ehrlichii MLHE-1 OmpW family protein YP_741759.1 1034776 R 187272 CDS YP_741760.1 114320077 4269301 complement(1035536..1035913) 1 NC_008340.1 PFAM: protein of unknown function DUF107; KEGG: pab:PAB1932 nodulation protein NfeD; hypothetical protein 1035913 4269301 Mlg_0916 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741760.1 1035536 R 187272 CDS YP_741761.1 114320078 4269302 1036064..1037752 1 NC_008340.1 PFAM: gamma-glutamyltranspeptidase; KEGG: pol:Bpro_1819 gamma-glutamyltransferase; gamma-glutamyltransferase 2 1037752 4269302 Mlg_0917 Alkalilimnicola ehrlichii MLHE-1 gamma-glutamyltransferase 2 YP_741761.1 1036064 D 187272 CDS YP_741762.1 114320079 4269303 complement(1037790..1039838) 1 NC_008340.1 TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: ape:APE2542 hypothetical protein; TRAP transporter, 4TM/12TM fusion protein 1039838 4269303 Mlg_0918 Alkalilimnicola ehrlichii MLHE-1 TRAP transporter, 4TM/12TM fusion protein YP_741762.1 1037790 R 187272 CDS YP_741763.1 114320080 4269304 complement(1039927..1040961) 1 NC_008340.1 KEGG: ape:APE2545 hypothetical protein; hypothetical protein 1040961 4269304 Mlg_0919 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741763.1 1039927 R 187272 CDS YP_741764.1 114320081 4269305 complement(1041134..1042384) 1 NC_008340.1 PFAM: EAL domain protein; KEGG: lpn:lpg0113 signal transduction protein containing EAL and modified HD-GYP domains; diguanylate phosphodiesterase 1042384 4269305 Mlg_0920 Alkalilimnicola ehrlichii MLHE-1 diguanylate phosphodiesterase YP_741764.1 1041134 R 187272 CDS YP_741765.1 114320082 4269306 complement(1043595..1045319) 1 NC_008340.1 PFAM: transporter-associated region; sodium/hydrogen exchanger; KEGG: hch:HCH_03500 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain; sodium/hydrogen exchanger 1045319 4269306 Mlg_0921 Alkalilimnicola ehrlichii MLHE-1 sodium/hydrogen exchanger YP_741765.1 1043595 R 187272 CDS YP_741766.1 114320083 4269307 1045468..1046097 1 NC_008340.1 PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; KEGG: sgl:SG2303 peptidyl-prolyl cis-trans isomerase A; peptidylprolyl isomerase 1046097 4269307 Mlg_0922 Alkalilimnicola ehrlichii MLHE-1 peptidylprolyl isomerase YP_741766.1 1045468 D 187272 CDS YP_741767.1 114320084 4269308 1046242..1048830 1 NC_008340.1 TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal repeat, beta-propeller; KEGG: mca:MCA1421 DNA gyrase, A subunit; DNA gyrase subunit A 1048830 4269308 Mlg_0923 Alkalilimnicola ehrlichii MLHE-1 DNA gyrase subunit A YP_741767.1 1046242 D 187272 CDS YP_741768.1 114320085 4268211 1048901..1049983 1 NC_008340.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase 1049983 4268211 Mlg_0924 Alkalilimnicola ehrlichii MLHE-1 phosphoserine aminotransferase YP_741768.1 1048901 D 187272 CDS YP_741769.1 114320086 4268212 1049995..1051164 1 NC_008340.1 PFAM: amino acid-binding ACT domain protein; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: noc:Noc_0173 D-isomer specific 2-hydroxyacid dehydrogenase; D-3-phosphoglycerate dehydrogenase 1051164 4268212 Mlg_0925 Alkalilimnicola ehrlichii MLHE-1 D-3-phosphoglycerate dehydrogenase YP_741769.1 1049995 D 187272 CDS YP_741770.1 114320087 4268213 1051178..1052281 1 NC_008340.1 TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; Chorismate mutase; amino acid-binding ACT domain protein; KEGG: noc:Noc_0174 chorismate mutase; chorismate mutase 1052281 4268213 Mlg_0926 Alkalilimnicola ehrlichii MLHE-1 chorismate mutase YP_741770.1 1051178 D 187272 CDS YP_741771.1 114320088 4268214 1052309..1053448 1 NC_008340.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 1053448 4268214 Mlg_0927 Alkalilimnicola ehrlichii MLHE-1 histidinol-phosphate aminotransferase YP_741771.1 1052309 D 187272 CDS YP_741772.1 114320089 4268215 1053445..1054335 1 NC_008340.1 PFAM: Prephenate dehydrogenase; NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: mca:MCA1416 prephenate dehydrogenase; prephenate dehydrogenase 1054335 4268215 Mlg_0928 Alkalilimnicola ehrlichii MLHE-1 prephenate dehydrogenase YP_741772.1 1053445 D 187272 CDS YP_741773.1 114320090 4268216 1054351..1055691 1 NC_008340.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 1055691 4268216 Mlg_0929 Alkalilimnicola ehrlichii MLHE-1 3-phosphoshikimate 1-carboxyvinyltransferase YP_741773.1 1054351 D 187272 CDS YP_741774.1 114320091 4268217 1055688..1056392 1 NC_008340.1 KEGG: ilo:IL1356 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region; cytidylate kinase 1056392 4268217 Mlg_0930 Alkalilimnicola ehrlichii MLHE-1 cytidylate kinase YP_741774.1 1055688 D 187272 CDS YP_741775.1 114320092 4268218 1056514..1058199 1 NC_008340.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 1058199 rpsA 4268218 rpsA Alkalilimnicola ehrlichii MLHE-1 30S ribosomal protein S1 YP_741775.1 1056514 D 187272 CDS YP_741776.1 114320093 4268219 1058329..1058631 1 NC_008340.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit beta 1058631 ihfB 4268219 ihfB Alkalilimnicola ehrlichii MLHE-1 integration host factor subunit beta YP_741776.1 1058329 D 187272 CDS YP_741777.1 114320094 4268220 1058668..1058961 1 NC_008340.1 KEGG: lpp:lpp1377 hypothetical protein; hypothetical protein 1058961 4268220 Mlg_0933 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741777.1 1058668 D 187272 CDS YP_741778.1 114320095 4268221 1058971..1060140 1 NC_008340.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: noc:Noc_0185 TPR repeat protein; hypothetical protein 1060140 4268221 Mlg_0934 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741778.1 1058971 D 187272 CDS YP_741779.1 114320096 4268222 1060144..1060851 1 NC_008340.1 KEGG: tbd:Tbd_0960 orotidine 5'-phosphate decarboxylase; TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; orotidine-5'-phosphate decarboxylase 1060851 4268222 Mlg_0935 Alkalilimnicola ehrlichii MLHE-1 orotidine-5'-phosphate decarboxylase YP_741779.1 1060144 D 187272 CDS YP_741780.1 114320097 4268223 1060851..1061840 1 NC_008340.1 catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro; specific substrate in vivo has not been identified yet; plays a role in long-term cell survival and expression of surface appendages; serine/threonine protein kinase 1061840 4268223 Mlg_0936 Alkalilimnicola ehrlichii MLHE-1 serine/threonine protein kinase YP_741780.1 1060851 D 187272 CDS YP_741781.1 114320098 4268224 complement(1061845..1062543) 1 NC_008340.1 KEGG: bxe:Bxe_B2003 hypothetical protein; hypothetical protein 1062543 4268224 Mlg_0937 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741781.1 1061845 R 187272 CDS YP_741782.1 114320099 4268225 complement(1062547..1063710) 1 NC_008340.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: lpf:lpl2012 hypothetical protein; cation diffusion facilitator family transporter 1063710 4268225 Mlg_0938 Alkalilimnicola ehrlichii MLHE-1 cation diffusion facilitator family transporter YP_741782.1 1062547 R 187272 CDS YP_741783.1 114320100 4268226 complement(1063707..1064183) 1 NC_008340.1 PFAM: ferric-uptake regulator; KEGG: bba:Bd1656 ferric uptake regulator-like protein; ferric uptake regulator family protein 1064183 4268226 Mlg_0939 Alkalilimnicola ehrlichii MLHE-1 ferric uptake regulator family protein YP_741783.1 1063707 R 187272 CDS YP_741784.1 114320101 4268227 complement(1064216..1064521) 1 NC_008340.1 PFAM: protein of unknown function DUF1244; KEGG: hch:HCH_04373 hypothetical protein; hypothetical protein 1064521 4268227 Mlg_0940 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741784.1 1064216 R 187272 CDS YP_741785.1 114320102 4269675 complement(1065082..1066890) 1 NC_008340.1 TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor, GTP-binding; elongation factor Tu, domain 2 protein; KEGG: noc:Noc_0720 GTP-binding protein TypA; GTP-binding protein TypA 1066890 4269675 Mlg_0941 Alkalilimnicola ehrlichii MLHE-1 GTP-binding protein TypA YP_741785.1 1065082 R 187272 CDS YP_741786.1 114320103 4269676 1067075..1067959 1 NC_008340.1 PFAM: PP-loop domain protein; KEGG: noc:Noc_1596 ATPase; PP-loop domain-containing protein 1067959 4269676 Mlg_0942 Alkalilimnicola ehrlichii MLHE-1 PP-loop domain-containing protein YP_741786.1 1067075 D 187272 CDS YP_741787.1 114320104 4269677 complement(1067994..1069439) 1 NC_008340.1 TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: tbd:Tbd_2697 type I secretion outer membrane protein, TolC; TolC family type I secretion outer membrane protein 1069439 4269677 Mlg_0943 Alkalilimnicola ehrlichii MLHE-1 TolC family type I secretion outer membrane protein YP_741787.1 1067994 R 187272 CDS YP_741788.1 114320105 4269678 complement(1069509..1070330) 1 NC_008340.1 similar protein in Methanocaldococcus converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate as the first step in methanopterin biosynthesis; GTP cyclohydrolase 1070330 4269678 Mlg_0944 Alkalilimnicola ehrlichii MLHE-1 GTP cyclohydrolase YP_741788.1 1069509 R 187272 CDS YP_741789.1 114320106 4269679 complement(1070393..1071313) 1 NC_008340.1 PFAM: Polyprenyl synthetase; KEGG: mca:MCA0818 geranyltranstransferase; farnesyl-diphosphate synthase 1071313 4269679 Mlg_0945 Alkalilimnicola ehrlichii MLHE-1 farnesyl-diphosphate synthase YP_741789.1 1070393 R 187272 CDS YP_741790.1 114320107 4269680 complement(1071273..1071530) 1 NC_008340.1 TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII, small subunit; KEGG: cbu:CBU_0468 exodeoxyribonuclease VII, small subunit; exodeoxyribonuclease VII small subunit 1071530 4269680 Mlg_0946 Alkalilimnicola ehrlichii MLHE-1 exodeoxyribonuclease VII small subunit YP_741790.1 1071273 R 187272 CDS YP_741791.1 114320108 4269681 1071703..1073595 1 NC_008340.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 1073595 4269681 Mlg_0947 Alkalilimnicola ehrlichii MLHE-1 DNA topoisomerase IV subunit B YP_741791.1 1071703 D 187272 CDS YP_741792.1 114320109 4269682 complement(1079650..1079946) 1 NC_008340.1 TIGRFAM: CRISPR-associated protein Cas2; KEGG: mca:MCA0929.1 CRISPR-associated protein Cas2; CRISPR-associated Cas2 family protein 1079946 4269682 Mlg_0948 Alkalilimnicola ehrlichii MLHE-1 CRISPR-associated Cas2 family protein YP_741792.1 1079650 R 187272 CDS YP_741793.1 114320110 4269683 complement(1079918..1080814) 1 NC_008340.1 TIGRFAM: CRISPR-associated protein Cas1; KEGG: mca:MCA0930 CRISPR-associated protein Cas1; CRISPR-associated Cas1 family protein 1080814 4269683 Mlg_0949 Alkalilimnicola ehrlichii MLHE-1 CRISPR-associated Cas1 family protein YP_741793.1 1079918 R 187272 CDS YP_741794.1 114320111 4269685 complement(1081520..1082248) 1 NC_008340.1 TIGRFAM: CRISPR-associated protein Cas5 family; CRISPR-associated protein Cas5; KEGG: mca:MCA0932 CRISPR-associated CT1976 family protein; CRISPR-associated Cas5 family protein 1082248 4269685 Mlg_0951 Alkalilimnicola ehrlichii MLHE-1 CRISPR-associated Cas5 family protein YP_741794.1 1081520 R 187272 CDS YP_741795.1 114320112 4269686 complement(1082248..1083405) 1 NC_008340.1 TIGRFAM: CRISPR-associated protein, Cse4 family; KEGG: mca:MCA0933 CRISPR-associated CT1975 family protein; CRISPR-associated Cse4 family protein 1083405 4269686 Mlg_0952 Alkalilimnicola ehrlichii MLHE-1 CRISPR-associated Cse4 family protein YP_741795.1 1082248 R 187272 CDS YP_741796.1 114320113 4269687 complement(1083416..1083934) 1 NC_008340.1 TIGRFAM: CRISPR-associated protein, Cse2 family; KEGG: mca:MCA0934 CRISPR-associated protein; CRISPR-associated Cse2 family protein 1083934 4269687 Mlg_0953 Alkalilimnicola ehrlichii MLHE-1 CRISPR-associated Cse2 family protein YP_741796.1 1083416 R 187272 CDS YP_741797.1 114320114 4269688 complement(1083921..1085468) 1 NC_008340.1 TIGRFAM: CRISPR-associated protein, Cse1 family; KEGG: mca:MCA0935 CRISPR-associated protein; CRISPR-associated Cse1 family protein 1085468 4269688 Mlg_0954 Alkalilimnicola ehrlichii MLHE-1 CRISPR-associated Cse1 family protein YP_741797.1 1083921 R 187272 CDS YP_741798.1 114320115 4269689 complement(1085465..1088080) 1 NC_008340.1 TIGRFAM: CRISPR-associated helicase Cas3; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: mca:MCA0936 CRISPR-associated helicase Cas3; CRISPR-associated helicase Cas3 1088080 4269689 Mlg_0955 Alkalilimnicola ehrlichii MLHE-1 CRISPR-associated helicase Cas3 YP_741798.1 1085465 R 187272 CDS YP_741799.1 114320116 4269690 complement(1088907..1091465) 1 NC_008340.1 KEGG: neu:NE0074 alpha-glucan phosphorylase, TIGRFAM: alpha-glucan phosphorylases; PFAM: glycosyl transferase, family 35; alpha-glucan phosphorylase 1091465 4269690 Mlg_0956 Alkalilimnicola ehrlichii MLHE-1 alpha-glucan phosphorylase YP_741799.1 1088907 R 187272 CDS YP_741800.1 114320117 4269691 complement(1091479..1092930) 1 NC_008340.1 catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose; glycogen synthase 1092930 glgA 4269691 glgA Alkalilimnicola ehrlichii MLHE-1 glycogen synthase YP_741800.1 1091479 R 187272 CDS YP_741801.1 114320118 4270428 complement(1092927..1095014) 1 NC_008340.1 catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching enzyme 1095014 4270428 Mlg_0958 Alkalilimnicola ehrlichii MLHE-1 glycogen branching enzyme YP_741801.1 1092927 R 187272 CDS YP_741802.1 114320119 4270429 1095295..1096563 1 NC_008340.1 catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate; glucose-1-phosphate adenylyltransferase 1096563 glgC 4270429 glgC Alkalilimnicola ehrlichii MLHE-1 glucose-1-phosphate adenylyltransferase YP_741802.1 1095295 D 187272 CDS YP_741803.1 114320120 4270430 1096550..1098304 1 NC_008340.1 PFAM: glycoside hydrolase, family 57; KEGG: tbd:Tbd_2060 glycosyl hydrolase 57; glycoside hydrolase 1098304 4270430 Mlg_0960 Alkalilimnicola ehrlichii MLHE-1 glycoside hydrolase YP_741803.1 1096550 D 187272 CDS YP_741804.1 114320121 4270431 1098301..1099776 1 NC_008340.1 amylomaltase; acts to release glucose from maltodextrins; 4-alpha-glucanotransferase 1099776 4270431 Mlg_0961 Alkalilimnicola ehrlichii MLHE-1 4-alpha-glucanotransferase YP_741804.1 1098301 D 187272 CDS YP_741805.1 114320122 4270432 complement(1099929..1100216) 1 NC_008340.1 hypothetical protein 1100216 4270432 Mlg_0962 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741805.1 1099929 R 187272 CDS YP_741806.1 114320123 4270433 1101145..1101444 1 NC_008340.1 KEGG: noc:Noc_0832 hypothetical protein; hypothetical protein 1101444 4270433 Mlg_0963 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741806.1 1101145 D 187272 CDS YP_741807.1 114320124 4270434 1101716..1102174 1 NC_008340.1 KEGG: tcx:Tcr_0149 hypothetical protein; hypothetical protein 1102174 4270434 Mlg_0964 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741807.1 1101716 D 187272 CDS YP_741808.1 114320125 4270435 1102242..1102646 1 NC_008340.1 KEGG: vpa:VPA0323 hypothetical protein; hypothetical protein 1102646 4270435 Mlg_0965 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741808.1 1102242 D 187272 CDS YP_741809.1 114320126 4270436 1102695..1103363 1 NC_008340.1 PFAM: O-methyltransferase, family 3; KEGG: ava:Ava_1652 O-methyltransferase, family 3; caffeoyl-CoA O-methyltransferase 1103363 4270436 Mlg_0966 Alkalilimnicola ehrlichii MLHE-1 caffeoyl-CoA O-methyltransferase YP_741809.1 1102695 D 187272 CDS YP_741810.1 114320127 4270437 1103407..1104183 1 NC_008340.1 KEGG: nmu:Nmul_A1801 hypothetical protein; hypothetical protein 1104183 4270437 Mlg_0967 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741810.1 1103407 D 187272 CDS YP_741811.1 114320128 4270438 complement(1104188..1104910) 1 NC_008340.1 PFAM: Lytic transglycosylase, catalytic; KEGG: bsu:BG13596 similar to lytic transglycosylase; lytic transglycosylase catalytic subunit 1104910 4270438 Mlg_0968 Alkalilimnicola ehrlichii MLHE-1 lytic transglycosylase catalytic subunit YP_741811.1 1104188 R 187272 CDS YP_741812.1 114320129 4270439 1105176..1107425 1 NC_008340.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 1107425 4270439 Mlg_0969 Alkalilimnicola ehrlichii MLHE-1 DNA topoisomerase IV subunit A YP_741812.1 1105176 D 187272 CDS YP_741813.1 114320130 4270440 complement(1107444..1108241) 1 NC_008340.1 PFAM: ABC-3 protein; KEGG: dar:Daro_0201 ABC-type Mn2+/Zn2+ transport systems permease components-like protein; ABC-3 protein 1108241 4270440 Mlg_0970 Alkalilimnicola ehrlichii MLHE-1 ABC-3 protein YP_741813.1 1107444 R 187272 CDS YP_741814.1 114320131 4270441 complement(1108238..1108813) 1 NC_008340.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dar:Daro_0200 ABC transporter related; ABC transporter-like protein 1108813 4270441 Mlg_0971 Alkalilimnicola ehrlichii MLHE-1 ABC transporter-like protein YP_741814.1 1108238 R 187272 CDS YP_741815.1 114320132 4270442 complement(1108820..1109698) 1 NC_008340.1 PFAM: periplasmic solute binding protein; KEGG: tbd:Tbd_2538 zinc/manganese transport system substrate-binding protein; periplasmic solute binding protein 1109698 4270442 Mlg_0972 Alkalilimnicola ehrlichii MLHE-1 periplasmic solute binding protein YP_741815.1 1108820 R 187272 CDS YP_741816.1 114320133 4270443 complement(1109788..1111143) 1 NC_008340.1 KEGG: tbd:Tbd_2537 hypothetical protein; hypothetical protein 1111143 4270443 Mlg_0973 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741816.1 1109788 R 187272 CDS YP_741817.1 114320134 4270444 1111491..1111976 1 NC_008340.1 PFAM: flagellar basal body-associated protein FliL; KEGG: noc:Noc_2166 flagellar basal body-associated protein FliL; flagellar basal body-associated protein FliL 1111976 4270444 Mlg_0974 Alkalilimnicola ehrlichii MLHE-1 flagellar basal body-associated protein FliL YP_741817.1 1111491 D 187272 CDS YP_741818.1 114320135 4269326 1111988..1113175 1 NC_008340.1 PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM; KEGG: hch:HCH_05181 flagellar motor switch protein FliM; flagellar motor switch protein FliM 1113175 4269326 Mlg_0975 Alkalilimnicola ehrlichii MLHE-1 flagellar motor switch protein FliM YP_741818.1 1111988 D 187272 CDS YP_741819.1 114320136 4269327 1113172..1113852 1 NC_008340.1 TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: sde:Sde_2174 surface presentation of antigens (SpoA) protein; flagellar motor switch protein FliN 1113852 4269327 Mlg_0976 Alkalilimnicola ehrlichii MLHE-1 flagellar motor switch protein FliN YP_741819.1 1113172 D 187272 CDS YP_741820.1 114320137 4269328 1113852..1114340 1 NC_008340.1 PFAM: flagellar biosynthesis protein, FliO; KEGG: tcx:Tcr_0739 flagellar biosynthesis protein, FliO; flagellar biosynthesis protein, FliO 1114340 4269328 Mlg_0977 Alkalilimnicola ehrlichii MLHE-1 flagellar biosynthesis protein, FliO YP_741820.1 1113852 D 187272 CDS YP_741821.1 114320138 4269329 1114337..1115089 1 NC_008340.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 1115089 fliP 4269329 fliP Alkalilimnicola ehrlichii MLHE-1 flagellar biosynthesis protein FliP YP_741821.1 1114337 D 187272 CDS YP_741822.1 114320139 4269330 1115136..1115405 1 NC_008340.1 TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ, family 3; KEGG: tcx:Tcr_0741 flagellar biosynthetic protein FliQ; flagellar biosynthetic protein FliQ 1115405 4269330 Mlg_0979 Alkalilimnicola ehrlichii MLHE-1 flagellar biosynthetic protein FliQ YP_741822.1 1115136 D 187272 CDS YP_741823.1 114320140 4269331 1115431..1116213 1 NC_008340.1 TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; KEGG: hch:HCH_05176 flagellar biosynthesis pathway, component FliR; flagellar biosynthetic protein FliR 1116213 4269331 Mlg_0980 Alkalilimnicola ehrlichii MLHE-1 flagellar biosynthetic protein FliR YP_741823.1 1115431 D 187272 CDS YP_741824.1 114320141 4269332 1116334..1117506 1 NC_008340.1 TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter; KEGG: sde:Sde_2169 flagellar biosynthetic protein FlhB; flagellar biosynthetic protein FlhB 1117506 4269332 Mlg_0981 Alkalilimnicola ehrlichii MLHE-1 flagellar biosynthetic protein FlhB YP_741824.1 1116334 D 187272 CDS YP_741825.1 114320142 4269333 1117577..1119697 1 NC_008340.1 TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein; KEGG: pae:PA1452 flagellar biosynthesis protein FlhA; flagellar biosynthesis protein FlhA 1119697 4269333 Mlg_0982 Alkalilimnicola ehrlichii MLHE-1 flagellar biosynthesis protein FlhA YP_741825.1 1117577 D 187272 CDS YP_741826.1 114320143 4269334 1119716..1121116 1 NC_008340.1 PFAM: GTP-binding signal recognition particle SRP54, G- domain; SMART: AAA ATPase; KEGG: pha:PSHAa0807 flagellar biosynthesis protein; GTP-binding signal recognition particle 1121116 4269334 Mlg_0983 Alkalilimnicola ehrlichii MLHE-1 GTP-binding signal recognition particle YP_741826.1 1119716 D 187272 CDS YP_741827.1 114320144 4269335 1121103..1121984 1 NC_008340.1 PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: noc:Noc_2156 cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase 1121984 4269335 Mlg_0984 Alkalilimnicola ehrlichii MLHE-1 cobyrinic acid a,c-diamide synthase YP_741827.1 1121103 D 187272 CDS YP_741828.1 114320145 4269336 1121981..1122709 1 NC_008340.1 TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: pae:PA1455 sigma factor FliA; RNA polymerase, sigma 28 subunit 1122709 4269336 Mlg_0985 Alkalilimnicola ehrlichii MLHE-1 RNA polymerase, sigma 28 subunit YP_741828.1 1121981 D 187272 CDS YP_741829.1 114320146 4269337 1122761..1123156 1 NC_008340.1 PFAM: response regulator receiver; KEGG: vpa:VP2231 chemotaxis protein CheY; response regulator receiver protein 1123156 4269337 Mlg_0986 Alkalilimnicola ehrlichii MLHE-1 response regulator receiver protein YP_741829.1 1122761 D 187272 CDS YP_741830.1 114320147 4269338 1123161..1123922 1 NC_008340.1 PFAM: Chemotaxis phosphatase, CheZ; KEGG: sdn:Sden_1345 chemotaxis phosphatase, CheZ; chemotaxis protein CheZ 1123922 4269338 Mlg_0987 Alkalilimnicola ehrlichii MLHE-1 chemotaxis protein CheZ YP_741830.1 1123161 D 187272 CDS YP_741831.1 114320148 4269339 1123992..1126196 1 NC_008340.1 PFAM: CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; KEGG: pae:PA1458 probable two-component sensor; CheA signal transduction histidine kinases 1126196 4269339 Mlg_0988 Alkalilimnicola ehrlichii MLHE-1 CheA signal transduction histidine kinases YP_741831.1 1123992 D 187272 CDS YP_741832.1 114320149 4269340 1126250..1127422 1 NC_008340.1 regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase 1127422 4269340 Mlg_0989 Alkalilimnicola ehrlichii MLHE-1 chemotaxis-specific methylesterase YP_741832.1 1126250 D 187272 CDS YP_741833.1 114320150 4269341 1127495..1128292 1 NC_008340.1 PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: hch:HCH_05163 ATPase involved in chromosome partitioning; cobyrinic acid a,c-diamide synthase 1128292 4269341 Mlg_0990 Alkalilimnicola ehrlichii MLHE-1 cobyrinic acid a,c-diamide synthase YP_741833.1 1127495 D 187272 CDS YP_741834.1 114320151 4269342 1128285..1129157 1 NC_008340.1 PFAM: CheW domain protein; KEGG: ppu:PP4333 CheW domain protein; chemotaxis protein CheW 1129157 4269342 Mlg_0991 Alkalilimnicola ehrlichii MLHE-1 chemotaxis protein CheW YP_741834.1 1128285 D 187272 CDS YP_741835.1 114320152 4269343 1129263..1129751 1 NC_008340.1 PFAM: CheW domain protein; KEGG: sde:Sde_2155 flagellar FliF M-ring protein; chemotaxis protein CheW 1129751 4269343 Mlg_0992 Alkalilimnicola ehrlichii MLHE-1 chemotaxis protein CheW YP_741835.1 1129263 D 187272 CDS YP_741836.1 114320153 4268361 1129892..1130164 1 NC_008340.1 TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; KEGG: ppu:PP1813 ComEA-related protein; helix-hairpin-helix repeat-containing competence protein ComEA 1130164 4268361 Mlg_0993 Alkalilimnicola ehrlichii MLHE-1 helix-hairpin-helix repeat-containing competence protein ComEA YP_741836.1 1129892 D 187272 CDS YP_741837.1 114320154 4268362 complement(1130249..1130992) 1 NC_008340.1 catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 1130992 fabG 4268362 fabG Alkalilimnicola ehrlichii MLHE-1 3-ketoacyl-ACP reductase YP_741837.1 1130249 R 187272 CDS YP_741838.1 114320155 4268363 1131118..1133244 1 NC_008340.1 helicase involved in DNA repair and perhaps also replication; ATP-dependent DNA helicase DinG 1133244 dinG 4268363 dinG Alkalilimnicola ehrlichii MLHE-1 ATP-dependent DNA helicase DinG YP_741838.1 1131118 D 187272 CDS YP_741839.1 114320156 4268364 complement(1133248..1133700) 1 NC_008340.1 hypothetical protein 1133700 4268364 Mlg_0996 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741839.1 1133248 R 187272 CDS YP_741840.1 114320157 4268365 complement(1133727..1134083) 1 NC_008340.1 PFAM: DsrC family protein; KEGG: tbd:Tbd_2480 sulfite reductase; DsrC family protein 1134083 4268365 Mlg_0997 Alkalilimnicola ehrlichii MLHE-1 DsrC family protein YP_741840.1 1133727 R 187272 CDS YP_741841.1 114320158 4268366 complement(1134097..1134507) 1 NC_008340.1 KEGG: rfr:Rfer_2344 hypothetical protein; hypothetical protein 1134507 4268366 Mlg_0998 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741841.1 1134097 R 187272 CDS YP_741842.1 114320159 4268367 complement(1134522..1135304) 1 NC_008340.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: hch:HCH_04007 parvulin-like peptidyl-prolyl isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 1135304 4268367 Mlg_0999 Alkalilimnicola ehrlichii MLHE-1 PpiC-type peptidyl-prolyl cis-trans isomerase YP_741842.1 1134522 R 187272 CDS YP_741843.1 114320160 4268368 complement(1135365..1136060) 1 NC_008340.1 TIGRFAM: respiratory nitrate reductase, gamma subunit; PFAM: Nitrate reductase, gamma subunit; KEGG: csa:Csal_1333 respiratory nitrate reductase, gamma subunit; respiratory nitrate reductase gamma subunit 1136060 4268368 Mlg_1000 Alkalilimnicola ehrlichii MLHE-1 respiratory nitrate reductase gamma subunit YP_741843.1 1135365 R 187272 CDS YP_741844.1 114320161 4268369 complement(1136079..1136774) 1 NC_008340.1 TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; PFAM: Nitrate reductase, delta subunit; KEGG: hch:HCH_04009 nitrate reductase molybdenum cofactor assembly chaperone; respiratory nitrate reductase chaperone NarJ 1136774 4268369 Mlg_1001 Alkalilimnicola ehrlichii MLHE-1 respiratory nitrate reductase chaperone NarJ YP_741844.1 1136079 R 187272 CDS YP_741845.1 114320162 4268370 complement(1136771..1138354) 1 NC_008340.1 TIGRFAM: nitrate reductase, beta subunit; KEGG: bms:BRA0298 respiratory nitrate reductase, beta subunit; respiratory nitrate reductase subunit beta 1138354 4268370 Mlg_1002 Alkalilimnicola ehrlichii MLHE-1 respiratory nitrate reductase subunit beta YP_741845.1 1136771 R 187272 CDS YP_741846.1 114320163 4268371 complement(1138351..1142109) 1 NC_008340.1 KEGG: csa:Csal_1330 nitrate reductase, alpha subunit; TIGRFAM: nitrate reductase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; respiratory nitrate reductase alpha subunit apoprotein 1142109 4268371 Mlg_1003 Alkalilimnicola ehrlichii MLHE-1 respiratory nitrate reductase alpha subunit apoprotein YP_741846.1 1138351 R 187272 CDS YP_741847.1 114320164 4268372 complement(1142208..1143863) 1 NC_008340.1 KEGG: eba:ebA6288 nitrate/nitrite antiporter; nitrate/nitrite antiporter 1143863 4268372 Mlg_1004 Alkalilimnicola ehrlichii MLHE-1 nitrate/nitrite antiporter YP_741847.1 1142208 R 187272 CDS YP_741848.1 114320165 4268373 1144073..1146007 1 NC_008340.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: tbd:Tbd_1400 periplasmic sensor signal transduction histidine kinase; nitrate/nitrite-specific signal transduction histidine kinase NarQ 1146007 4268373 Mlg_1005 Alkalilimnicola ehrlichii MLHE-1 nitrate/nitrite-specific signal transduction histidine kinase NarQ YP_741848.1 1144073 D 187272 CDS YP_741849.1 114320166 4268374 1145991..1146650 1 NC_008340.1 PFAM: regulatory protein, LuxR; response regulator receiver; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: pae:PA3879 two-component response regulator NarL; LuxR family transcriptional regulator 1146650 4268374 Mlg_1006 Alkalilimnicola ehrlichii MLHE-1 LuxR family transcriptional regulator YP_741849.1 1145991 D 187272 CDS YP_741850.1 114320167 4268375 complement(1146695..1148203) 1 NC_008340.1 PFAM: major facilitator superfamily MFS_1; KEGG: par:Psyc_0601 MFS nitrate/nitrite transporter; major facilitator transporter 1148203 4268375 Mlg_1007 Alkalilimnicola ehrlichii MLHE-1 major facilitator transporter YP_741850.1 1146695 R 187272 CDS YP_741851.1 114320168 4268376 complement(1148246..1148704) 1 NC_008340.1 PFAM: UspA domain protein; KEGG: sai:Saci_1640 universal stress protein; UspA domain-containing protein 1148704 4268376 Mlg_1008 Alkalilimnicola ehrlichii MLHE-1 UspA domain-containing protein YP_741851.1 1148246 R 187272 CDS YP_741852.1 114320169 4268377 1149199..1149927 1 NC_008340.1 KEGG: pae:PA5139 hypothetical protein; hypothetical protein 1149927 4268377 Mlg_1009 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741852.1 1149199 D 187272 CDS YP_741853.1 114320170 4270039 1150035..1150589 1 NC_008340.1 KEGG: mag:amb3448 hypothetical protein; hypothetical protein 1150589 4270039 Mlg_1010 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741853.1 1150035 D 187272 CDS YP_741854.1 114320171 4270040 1150591..1150998 1 NC_008340.1 KEGG: mag:amb3449 hypothetical protein; hypothetical protein 1150998 4270040 Mlg_1011 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741854.1 1150591 D 187272 CDS YP_741855.1 114320172 4270041 1151006..1151893 1 NC_008340.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mag:amb4415 FOG: GGDEF domain; diguanylate cyclase 1151893 4270041 Mlg_1012 Alkalilimnicola ehrlichii MLHE-1 diguanylate cyclase YP_741855.1 1151006 D 187272 CDS YP_741856.1 114320173 4270042 1151893..1153563 1 NC_008340.1 PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: mag:amb0187 serine phosphatase RsbU; serine phosphatase 1153563 4270042 Mlg_1013 Alkalilimnicola ehrlichii MLHE-1 serine phosphatase YP_741856.1 1151893 D 187272 CDS YP_741857.1 114320174 4270043 1153884..1155350 1 NC_008340.1 KEGG: mca:MCA0291 inosine-5'-monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: CBS domain containing protein; IMP dehydrogenase/GMP reductase; 2-nitropropane dioxygenase, NPD; inosine-5'-monophosphate dehydrogenase 1155350 4270043 Mlg_1014 Alkalilimnicola ehrlichii MLHE-1 inosine-5'-monophosphate dehydrogenase YP_741857.1 1153884 D 187272 CDS YP_741858.1 114320175 4270044 complement(1155437..1156192) 1 NC_008340.1 PFAM: protein of unknown function DUF125, transmembrane; KEGG: csa:Csal_2162 protein of unknown function DUF125, transmembrane; hypothetical protein 1156192 4270044 Mlg_1015 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741858.1 1155437 R 187272 CDS YP_741859.1 114320176 4270045 1156389..1157966 1 NC_008340.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 1157966 guaA 4270045 guaA Alkalilimnicola ehrlichii MLHE-1 GMP synthase YP_741859.1 1156389 D 187272 CDS YP_741860.1 114320177 4270046 1157971..1158465 1 NC_008340.1 PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: bxe:Bxe_A1920 cytidine/deoxycytidylate deaminase, zinc-binding; tRNA-adenosine deaminase 1158465 4270046 Mlg_1017 Alkalilimnicola ehrlichii MLHE-1 tRNA-adenosine deaminase YP_741860.1 1157971 D 187272 CDS YP_741861.1 114320178 4270047 complement(1158462..1159946) 1 NC_008340.1 YfhD; uncharacterized member of the transglycosylase slt family; part of the rob operon, which plays a role in cellular resistance to antibiotics, bactericidal agents, and organic solvents; unknown function; transglycosylase 1159946 4270047 Mlg_1018 Alkalilimnicola ehrlichii MLHE-1 transglycosylase YP_741861.1 1158462 R 187272 CDS YP_741862.1 114320179 4270049 1160239..1160553 1 NC_008340.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: csa:Csal_2488 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 1160553 4270049 Mlg_1019 Alkalilimnicola ehrlichii MLHE-1 antibiotic biosynthesis monooxygenase YP_741862.1 1160239 D 187272 CDS YP_741863.1 114320180 4270050 complement(1160528..1161634) 1 NC_008340.1 PFAM: histone deacetylase superfamily; KEGG: bur:Bcep18194_A4392 histone deacetylase superfamily; histone deacetylase superfamily protein 1161634 4270050 Mlg_1020 Alkalilimnicola ehrlichii MLHE-1 histone deacetylase superfamily protein YP_741863.1 1160528 R 187272 CDS YP_741864.1 114320181 4270051 1161852..1162208 1 NC_008340.1 PFAM: protein of unknown function DUF454; KEGG: rru:Rru_A2502 protein of unknown function DUF454; hypothetical protein 1162208 4270051 Mlg_1021 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741864.1 1161852 D 187272 CDS YP_741865.1 114320182 4270052 1162249..1164417 1 NC_008340.1 PFAM: GCN5-related N-acetyltransferase; protein of unknown function DUF699, ATPase ; domain of unknown function DUF1726; KEGG: noc:Noc_2706 hypothetical protein; hypothetical protein 1164417 4270052 Mlg_1022 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741865.1 1162249 D 187272 CDS YP_741866.1 114320183 4270053 1164448..1166115 1 NC_008340.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: noc:Noc_1279 NADH/ubiquinone/plastoquinone (complex I); NADH/ubiquinone/plastoquinone (complex I) 1166115 4270053 Mlg_1023 Alkalilimnicola ehrlichii MLHE-1 NADH/ubiquinone/plastoquinone (complex I) YP_741866.1 1164448 D 187272 CDS YP_741867.1 114320184 4270054 complement(1166132..1167631) 1 NC_008340.1 PFAM: protein of unknown function DUF344; KEGG: dar:Daro_3585 protein of unknown function DUF344; polyphosphate:AMP phosphotransferase 1167631 4270054 Mlg_1024 Alkalilimnicola ehrlichii MLHE-1 polyphosphate:AMP phosphotransferase YP_741867.1 1166132 R 187272 CDS YP_741868.1 114320185 4270055 1168302..1171046 1 NC_008340.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein domain protein; Haloacid dehalogenase domain protein hydrolase; cation transporting ATPase domain protein; E1-E2 ATPase-associated domain protein; KEGG: noc:Noc_1406 cation transport ATPase; HAD superfamily P-type ATPase 1171046 4270055 Mlg_1025 Alkalilimnicola ehrlichii MLHE-1 HAD superfamily P-type ATPase YP_741868.1 1168302 D 187272 CDS YP_741869.1 114320186 4269767 complement(1171086..1171763) 1 NC_008340.1 PFAM: DSBA oxidoreductase; KEGG: atc:AGR_C_3262 hypothetical protein; DSBA oxidoreductase 1171763 4269767 Mlg_1026 Alkalilimnicola ehrlichii MLHE-1 DSBA oxidoreductase YP_741869.1 1171086 R 187272 CDS YP_741870.1 114320187 4269768 1171847..1173487 1 NC_008340.1 KEGG: sme:SMc01665 hypothetical protein; hypothetical protein 1173487 4269768 Mlg_1027 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741870.1 1171847 D 187272 CDS YP_741871.1 114320188 4269769 complement(1173506..1175434) 1 NC_008340.1 PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; GAF domain protein; SMART: AAA ATPase; KEGG: rpc:RPC_3606 sigma54 specific transcriptional regulator with GAF sensor, fis family; Fis family transcriptional regulator 1175434 4269769 Mlg_1028 Alkalilimnicola ehrlichii MLHE-1 Fis family transcriptional regulator YP_741871.1 1173506 R 187272 CDS YP_741872.1 114320189 4269770 complement(1175817..1176323) 1 NC_008340.1 KEGG: rpc:RPC_3603 acetone carboxylase gamma subunit; acetone carboxylase subunit gamma 1176323 4269770 Mlg_1029 Alkalilimnicola ehrlichii MLHE-1 acetone carboxylase subunit gamma YP_741872.1 1175817 R 187272 CDS YP_741873.1 114320190 4269771 complement(1176391..1178730) 1 NC_008340.1 PFAM: Hydantoinase B/oxoprolinase; KEGG: rpc:RPC_3604 hydantoinase B/oxoprolinase; acetone carboxylase subunit alpha 1178730 4269771 Mlg_1030 Alkalilimnicola ehrlichii MLHE-1 acetone carboxylase subunit alpha YP_741873.1 1176391 R 187272 CDS YP_741874.1 114320191 4269772 complement(1178787..1180940) 1 NC_008340.1 PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: rpc:RPC_3605 hydantoinase/oxoprolinase; acetone carboxylase subunit beta 1180940 4269772 Mlg_1031 Alkalilimnicola ehrlichii MLHE-1 acetone carboxylase subunit beta YP_741874.1 1178787 R 187272 CDS YP_741875.1 114320192 4269773 1181168..1181560 1 NC_008340.1 PFAM: glutaredoxin; KEGG: tbd:Tbd_0167 glutaredoxin family protein; glutaredoxin 1181560 4269773 Mlg_1032 Alkalilimnicola ehrlichii MLHE-1 glutaredoxin YP_741875.1 1181168 D 187272 CDS YP_741876.1 114320193 4269774 1181637..1181981 1 NC_008340.1 hypothetical protein 1181981 4269774 Mlg_1033 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741876.1 1181637 D 187272 CDS YP_741877.1 114320194 4269775 complement(1181989..1182549) 1 NC_008340.1 TIGRFAM: Twin-arginine translocation pathway signal; PFAM: protein of unknown function DUF882; Peptidase M15A; KEGG: pca:Pcar_0380 hypothetical protein; hypothetical protein 1182549 4269775 Mlg_1034 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741877.1 1181989 R 187272 CDS YP_741878.1 114320195 4269776 complement(1183364..1184632) 1 NC_008340.1 TIGRFAM: thiamine biosynthesis/tRNA modification protein ThiI; PFAM: thiamine biosynthesis protein; ExsB family protein; KEGG: mta:Moth_0198 thiamine biosynthesis; thiamine biosynthesis/tRNA modification protein ThiI 1184632 4269776 Mlg_1035 Alkalilimnicola ehrlichii MLHE-1 thiamine biosynthesis/tRNA modification protein ThiI YP_741878.1 1183364 R 187272 CDS YP_741879.1 114320196 4269777 complement(1184735..1185031) 1 NC_008340.1 PFAM: phosphopantetheine-binding; KEGG: dps:DPPB41 predicted orf; phosphopantetheine-binding 1185031 4269777 Mlg_1036 Alkalilimnicola ehrlichii MLHE-1 phosphopantetheine-binding YP_741879.1 1184735 R 187272 CDS YP_741880.1 114320197 4269778 1185266..1187929 1 NC_008340.1 PFAM: GCN5-related N-acetyltransferase; CoA-binding domain protein; KEGG: csa:Csal_1092 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase 1187929 4269778 Mlg_1037 Alkalilimnicola ehrlichii MLHE-1 GCN5-like N-acetyltransferase YP_741880.1 1185266 D 187272 CDS YP_741881.1 114320198 4269779 complement(1187932..1188372) 1 NC_008340.1 PFAM: protein of unknown function DUF123; KEGG: mca:MCA2572 hypothetical protein; hypothetical protein 1188372 4269779 Mlg_1038 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741881.1 1187932 R 187272 CDS YP_741882.1 114320199 4269780 complement(1188548..1190551) 1 NC_008340.1 TIGRFAM: TonB-dependent copper receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: cvi:CV0895 outer membrane protein OprC complement; TonB-dependent copper receptor 1190551 4269780 Mlg_1039 Alkalilimnicola ehrlichii MLHE-1 TonB-dependent copper receptor YP_741882.1 1188548 R 187272 CDS YP_741883.1 114320200 4269781 1190833..1191276 1 NC_008340.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: csa:Csal_0685 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 1191276 4269781 Mlg_1040 Alkalilimnicola ehrlichii MLHE-1 glyoxalase/bleomycin resistance protein/dioxygenase YP_741883.1 1190833 D 187272 CDS YP_741884.1 114320201 4269782 1191381..1192292 1 NC_008340.1 PFAM: periplasmic solute binding protein; KEGG: tfu:Tfu_1663 ABC transporter substrate-binding protein; periplasmic solute binding protein 1192292 4269782 Mlg_1041 Alkalilimnicola ehrlichii MLHE-1 periplasmic solute binding protein YP_741884.1 1191381 D 187272 CDS YP_741885.1 114320202 4269783 1192295..1193119 1 NC_008340.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: syw:SYNW1340 ABC transporter, ATP binding domain, possibly Mn transporter; ABC transporter-like protein 1193119 4269783 Mlg_1042 Alkalilimnicola ehrlichii MLHE-1 ABC transporter-like protein YP_741885.1 1192295 D 187272 CDS YP_741886.1 114320203 4270516 1193119..1194057 1 NC_008340.1 PFAM: ABC-3 protein; KEGG: bat:BAS2965 ABC transporter, permease; ABC-3 protein 1194057 4270516 Mlg_1043 Alkalilimnicola ehrlichii MLHE-1 ABC-3 protein YP_741886.1 1193119 D 187272 CDS YP_741887.1 114320204 4270517 complement(1194069..1195259) 1 NC_008340.1 PFAM: major facilitator superfamily MFS_1; KEGG: ilo:IL2408 permease of the major facilitator superfamily; major facilitator transporter 1195259 4270517 Mlg_1044 Alkalilimnicola ehrlichii MLHE-1 major facilitator transporter YP_741887.1 1194069 R 187272 CDS YP_741888.1 114320205 4270518 complement(1195795..1197279) 1 NC_008340.1 PFAM: protein of unknown function UPF0061; KEGG: rpd:RPD_2948 protein of unknown function UPF0061; hypothetical protein 1197279 4270518 Mlg_1045 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741888.1 1195795 R 187272 CDS YP_741889.1 114320206 4270519 1197413..1198765 1 NC_008340.1 PFAM: Lytic transglycosylase, catalytic; KEGG: pfo:Pfl_0998 lytic transglycosylase, catalytic; lytic transglycosylase catalytic subunit 1198765 4270519 Mlg_1046 Alkalilimnicola ehrlichii MLHE-1 lytic transglycosylase catalytic subunit YP_741889.1 1197413 D 187272 CDS YP_741890.1 114320207 4270520 1198977..1217165 1 NC_008340.1 KEGG: gsu:GSU1154 surface repeat protein; hypothetical protein 1217165 4270520 Mlg_1047 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741890.1 1198977 D 187272 CDS YP_741891.1 114320208 4270521 1217162..1218847 1 NC_008340.1 PFAM: Polypeptide-transport-associated domain protein, ShlB-type; KEGG: gsu:GSU1153 outer membrane protein, OMP85 family; polypeptide-transport-associated domain-containing protein 1218847 4270521 Mlg_1048 Alkalilimnicola ehrlichii MLHE-1 polypeptide-transport-associated domain-containing protein YP_741891.1 1217162 D 187272 CDS YP_741892.1 114320209 4270522 1218945..1223327 1 NC_008340.1 KEGG: gme:Gmet_1200 hypothetical protein; hypothetical protein 1223327 4270522 Mlg_1049 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741892.1 1218945 D 187272 CDS YP_741893.1 114320210 4270523 complement(1223369..1224148) 1 NC_008340.1 PFAM: metallophosphoesterase; KEGG: bte:BTH_II0558 serine/threonine protein phosphatase 1; metallophosphoesterase 1224148 4270523 Mlg_1050 Alkalilimnicola ehrlichii MLHE-1 metallophosphoesterase YP_741893.1 1223369 R 187272 CDS YP_741894.1 114320211 4270524 1224314..1224724 1 NC_008340.1 hypothetical protein 1224724 4270524 Mlg_1051 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741894.1 1224314 D 187272 CDS YP_741895.1 114320212 4270525 1224961..1226001 1 NC_008340.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rpc:RPC_3525 diguanylate cyclase (GGDEF domain); diguanylate cyclase 1226001 4270525 Mlg_1052 Alkalilimnicola ehrlichii MLHE-1 diguanylate cyclase YP_741895.1 1224961 D 187272 CDS YP_741896.1 114320213 4270526 complement(1225998..1227557) 1 NC_008340.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; RNA-directed RNA polymerase, double-strand and positive-strand RNA virus; KEGG: xac:XAC1420 hypothetical protein; diguanylate cyclase 1227557 4270526 Mlg_1053 Alkalilimnicola ehrlichii MLHE-1 diguanylate cyclase YP_741896.1 1225998 R 187272 CDS YP_741897.1 114320214 4270528 complement(1228251..1228688) 1 NC_008340.1 KEGG: plt:Plut_1002 hypothetical protein; hypothetical protein 1228688 4270528 Mlg_1055 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741897.1 1228251 R 187272 CDS YP_741898.1 114320215 4270529 1228870..1229415 1 NC_008340.1 PFAM: cytochrome B561; KEGG: rru:Rru_A3682 cytochrome b561; cytochrome B561 1229415 4270529 Mlg_1056 Alkalilimnicola ehrlichii MLHE-1 cytochrome B561 YP_741898.1 1228870 D 187272 CDS YP_741899.1 114320216 4270530 complement(1229387..1232494) 1 NC_008340.1 PFAM: acriflavin resistance protein; KEGG: hch:HCH_05479 cation/multidrug efflux pump; acriflavin resistance protein 1232494 4270530 Mlg_1057 Alkalilimnicola ehrlichii MLHE-1 acriflavin resistance protein YP_741899.1 1229387 R 187272 CDS YP_741900.1 114320217 4270531 complement(1232491..1233858) 1 NC_008340.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: vfi:VF0297 acriflavin resistance periplasmic protein; RND family efflux transporter MFP subunit 1233858 4270531 Mlg_1058 Alkalilimnicola ehrlichii MLHE-1 RND family efflux transporter MFP subunit YP_741900.1 1232491 R 187272 CDS YP_741901.1 114320218 4270532 complement(1233855..1234493) 1 NC_008340.1 PFAM: regulatory protein, TetR; KEGG: eba:ebA6247 transcriptional regulator, TetR family; TetR family transcriptional regulator 1234493 4270532 Mlg_1059 Alkalilimnicola ehrlichii MLHE-1 TetR family transcriptional regulator YP_741901.1 1233855 R 187272 CDS YP_741902.1 114320219 4270533 1234768..1238481 1 NC_008340.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: mca:MCA0335 hypothetical protein; oxidoreductase FAD/NAD(P)-binding subunit 1238481 4270533 Mlg_1060 Alkalilimnicola ehrlichii MLHE-1 oxidoreductase FAD/NAD(P)-binding subunit YP_741902.1 1234768 D 187272 CDS YP_741903.1 114320220 4268982 1239341..1240735 1 NC_008340.1 PFAM: phage integrase; KEGG: vpa:VP0380 integrase; phage integrase 1240735 4268982 Mlg_1061 Alkalilimnicola ehrlichii MLHE-1 phage integrase YP_741903.1 1239341 D 187272 CDS YP_741904.1 114320221 4268983 1241073..1241300 1 NC_008340.1 PFAM: Prophage CP4-57 regulatory; KEGG: rpc:RPC_4521 phage transcriptional regulator, AlpA; phage transcriptional regulator, AlpA 1241300 4268983 Mlg_1062 Alkalilimnicola ehrlichii MLHE-1 phage transcriptional regulator, AlpA YP_741904.1 1241073 D 187272 CDS YP_741905.1 114320222 4268984 1241300..1244077 1 NC_008340.1 KEGG: rsp:RSP_4122 hypothetical protein; hypothetical protein 1244077 4268984 Mlg_1063 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741905.1 1241300 D 187272 CDS YP_741906.1 114320223 4268985 1244442..1244807 1 NC_008340.1 hypothetical protein 1244807 4268985 Mlg_1064 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741906.1 1244442 D 187272 CDS YP_741907.1 114320224 4268986 1244807..1245040 1 NC_008340.1 hypothetical protein 1245040 4268986 Mlg_1065 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741907.1 1244807 D 187272 CDS YP_741908.1 114320225 4268987 1245037..1246428 1 NC_008340.1 hypothetical protein 1246428 4268987 Mlg_1066 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741908.1 1245037 D 187272 CDS YP_741909.1 114320226 4268988 1246447..1246872 1 NC_008340.1 hypothetical protein 1246872 4268988 Mlg_1067 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741909.1 1246447 D 187272 CDS YP_741910.1 114320227 4268989 1246865..1247437 1 NC_008340.1 hypothetical protein 1247437 4268989 Mlg_1068 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741910.1 1246865 D 187272 CDS YP_741911.1 114320228 4268991 complement(1248328..1248666) 1 NC_008340.1 hypothetical protein 1248666 4268991 Mlg_1069 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741911.1 1248328 R 187272 CDS YP_741912.1 114320229 4268992 1248828..1249535 1 NC_008340.1 PFAM: cyclic nucleotide-binding; regulatory protein, Crp; KEGG: bmb:BruAb2_0899 NnrR, transcriptional regulator; Crp/Fnr family transcriptional regulator 1249535 4268992 Mlg_1070 Alkalilimnicola ehrlichii MLHE-1 Crp/Fnr family transcriptional regulator YP_741912.1 1248828 D 187272 CDS YP_741913.1 114320230 4268993 1249690..1250007 1 NC_008340.1 PFAM: cytochrome c, class I; KEGG: noc:Noc_3049 cytochrome c, class I; cytochrome c, class I 1250007 4268993 Mlg_1071 Alkalilimnicola ehrlichii MLHE-1 cytochrome c, class I YP_741913.1 1249690 D 187272 CDS YP_741914.1 114320231 4268994 1250192..1250533 1 NC_008340.1 KEGG: hch:HCH_01015 cytochrome c553; cytochrome c553 1250533 4268994 Mlg_1072 Alkalilimnicola ehrlichii MLHE-1 cytochrome c553 YP_741914.1 1250192 D 187272 CDS YP_741915.1 114320232 4268995 1250565..1252703 1 NC_008340.1 PFAM: FMN-binding domain protein; KEGG: hch:HCH_03389 regulator of nitric oxide reductase transcription; FMN-binding domain-containing protein 1252703 4268995 Mlg_1073 Alkalilimnicola ehrlichii MLHE-1 FMN-binding domain-containing protein YP_741915.1 1250565 D 187272 CDS YP_741916.1 114320233 4268996 1252757..1254679 1 NC_008340.1 reduces nitrous oxide to nitrogen; nitrous-oxide reductase 1254679 4268996 Mlg_1074 Alkalilimnicola ehrlichii MLHE-1 nitrous-oxide reductase YP_741916.1 1252757 D 187272 CDS YP_741917.1 114320234 4268997 1254735..1256063 1 NC_008340.1 PFAM: periplasmic copper-binding; SMART: Parallel beta-helix repeat; Carbohydrate-binding and sugar hydrolysis; KEGG: pae:PA3393 NosD protein; periplasmic copper-binding 1256063 4268997 Mlg_1075 Alkalilimnicola ehrlichii MLHE-1 periplasmic copper-binding YP_741917.1 1254735 D 187272 CDS YP_741918.1 114320235 4270021 1256060..1256986 1 NC_008340.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cps:CPS_4734 copper ABC transporter, ATP-binding protein; ABC transporter-like protein 1256986 4270021 Mlg_1076 Alkalilimnicola ehrlichii MLHE-1 ABC transporter-like protein YP_741918.1 1256060 D 187272 CDS YP_741919.1 114320236 4270022 1256983..1257810 1 NC_008340.1 KEGG: hch:HCH_03385 ABC-type transport system involved in multi-copper enzyme maturation, permease component; multi-copper enzyme maturation ABC transporter permease 1257810 4270022 Mlg_1077 Alkalilimnicola ehrlichii MLHE-1 multi-copper enzyme maturation ABC transporter permease YP_741919.1 1256983 D 187272 CDS YP_741920.1 114320237 4270023 1257820..1258401 1 NC_008340.1 PFAM: NosL family protein; KEGG: pae:PA3396 NosL protein; NosL family protein 1258401 4270023 Mlg_1078 Alkalilimnicola ehrlichii MLHE-1 NosL family protein YP_741920.1 1257820 D 187272 CDS YP_741921.1 114320238 4270024 1258401..1259153 1 NC_008340.1 PFAM: phospholipase/Carboxylesterase; KEGG: bpe:BP2966 probable carboxylesterase; phospholipase/carboxylesterase 1259153 4270024 Mlg_1079 Alkalilimnicola ehrlichii MLHE-1 phospholipase/carboxylesterase YP_741921.1 1258401 D 187272 CDS YP_741922.1 114320239 4270025 1259187..1259801 1 NC_008340.1 hypothetical protein 1259801 4270025 Mlg_1080 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741922.1 1259187 D 187272 CDS YP_741923.1 114320240 4270026 1259824..1260369 1 NC_008340.1 PFAM: NosL family protein; KEGG: pae:PA3396 NosL protein; NosL family protein 1260369 4270026 Mlg_1081 Alkalilimnicola ehrlichii MLHE-1 NosL family protein YP_741923.1 1259824 D 187272 CDS YP_741924.1 114320241 4270027 1260429..1260803 1 NC_008340.1 hypothetical protein 1260803 4270027 Mlg_1082 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741924.1 1260429 D 187272 CDS YP_741925.1 114320242 4270028 complement(1260921..1262930) 1 NC_008340.1 KEGG: mlo:mll7347 ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 1262930 4270028 Mlg_1083 Alkalilimnicola ehrlichii MLHE-1 oligopeptide/dipeptide ABC transporter ATPase YP_741925.1 1260921 R 187272 CDS YP_741926.1 114320243 4270029 complement(1262930..1263727) 1 NC_008340.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll7349 ABC transporter binding protein; binding-protein-dependent transport systems inner membrane component 1263727 4270029 Mlg_1084 Alkalilimnicola ehrlichii MLHE-1 binding-protein-dependent transport systems inner membrane component YP_741926.1 1262930 R 187272 CDS YP_741927.1 114320244 4270030 complement(1263729..1264685) 1 NC_008340.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_A0789 ABC oligopeptide/dipeptide transporter, innermembrane subunit; binding-protein-dependent transport systems inner membrane component 1264685 4270030 Mlg_1085 Alkalilimnicola ehrlichii MLHE-1 binding-protein-dependent transport systems inner membrane component YP_741927.1 1263729 R 187272 CDS YP_741928.1 114320245 4270031 complement(1264706..1266277) 1 NC_008340.1 TIGRFAM: Twin-arginine translocation pathway signal; PFAM: extracellular solute-binding protein, family 5; KEGG: mlo:mll2276 oligopeptide binding protein of oligopeptide ABC transporter; extracellular solute-binding protein 1266277 4270031 Mlg_1086 Alkalilimnicola ehrlichii MLHE-1 extracellular solute-binding protein YP_741928.1 1264706 R 187272 CDS YP_741929.1 114320246 4270032 complement(1266553..1267731) 1 NC_008340.1 PFAM: aminotransferase, class I and II; KEGG: hch:HCH_04972 aspartate/tyrosine/aromatic aminotransferase; aminotransferase 1267731 4270032 Mlg_1087 Alkalilimnicola ehrlichii MLHE-1 aminotransferase YP_741929.1 1266553 R 187272 CDS YP_741930.1 114320247 4270033 1268146..1270173 1 NC_008340.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 1270173 4270033 Mlg_1088 Alkalilimnicola ehrlichii MLHE-1 excinuclease ABC subunit B YP_741930.1 1268146 D 187272 CDS YP_741931.1 114320248 4270034 1270228..1271100 1 NC_008340.1 TIGRFAM: Pseudouridine synthase, Rsu; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: noc:Noc_1041 pseudouridine synthase, Rsu; ribosomal large subunit pseudouridine synthase B 1271100 4270034 Mlg_1089 Alkalilimnicola ehrlichii MLHE-1 ribosomal large subunit pseudouridine synthase B YP_741931.1 1270228 D 187272 CDS YP_741932.1 114320249 4270035 1271143..1271910 1 NC_008340.1 PFAM: protein of unknown function DUF81; KEGG: pcr:Pcryo_2117 protein of unknown function DUF81; hypothetical protein 1271910 4270035 Mlg_1090 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741932.1 1271143 D 187272 CDS YP_741933.1 114320250 4270036 complement(1271930..1274236) 1 NC_008340.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; Nitrate and nitrite sensing domain protein; KEGG: pca:Pcar_2558 signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like; diguanylate cyclase/phosphodiesterase 1274236 4270036 Mlg_1091 Alkalilimnicola ehrlichii MLHE-1 diguanylate cyclase/phosphodiesterase YP_741933.1 1271930 R 187272 CDS YP_741934.1 114320251 4270037 1274353..1275285 1 NC_008340.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eba:ebA3580 nod factor export ATP-binding protein I; ABC transporter-like protein 1275285 4270037 Mlg_1092 Alkalilimnicola ehrlichii MLHE-1 ABC transporter-like protein YP_741934.1 1274353 D 187272 CDS YP_741935.1 114320252 4270038 1275289..1276092 1 NC_008340.1 TIGRFAM: ABC-2 type transporter, NodJ family; PFAM: ABC-2 type transporter; KEGG: rme:Rmet_2458 ABC-2 type transporter, NodJ family; ABC transporter 1276092 4270038 Mlg_1093 Alkalilimnicola ehrlichii MLHE-1 ABC transporter YP_741935.1 1275289 D 187272 CDS YP_741936.1 114320253 4269801 complement(1276114..1277427) 1 NC_008340.1 KEGG: tbd:Tbd_0829 hypothetical protein; hypothetical protein 1277427 4269801 Mlg_1094 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741936.1 1276114 R 187272 CDS YP_741937.1 114320254 4269802 complement(1277466..1278338) 1 NC_008340.1 KEGG: tbd:Tbd_0830 hypothetical protein; hypothetical protein 1278338 4269802 Mlg_1095 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741937.1 1277466 R 187272 CDS YP_741938.1 114320255 4269803 complement(1278355..1278981) 1 NC_008340.1 KEGG: csa:Csal_2070 SOS-response transcriptional repressor, LexA; TIGRFAM: LexA repressor; PFAM: peptidase S24, S26A and S26B; LexA DNA-binding domain protein; SOS-response transcriptional repressor, LexA 1278981 4269803 Mlg_1096 Alkalilimnicola ehrlichii MLHE-1 SOS-response transcriptional repressor, LexA YP_741938.1 1278355 R 187272 CDS YP_741939.1 114320256 4269804 1279186..1281393 1 NC_008340.1 KEGG: pae:PA0934 GTP pyrophosphokinase; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase, HD sub domain; RelA/SpoT domain protein; (p)ppGpp synthetase I SpoT/RelA 1281393 4269804 Mlg_1097 Alkalilimnicola ehrlichii MLHE-1 (p)ppGpp synthetase I SpoT/RelA YP_741939.1 1279186 D 187272 CDS YP_741940.1 114320257 4269805 complement(1281437..1283350) 1 NC_008340.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: son:SO4053 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 1283350 4269805 Mlg_1098 Alkalilimnicola ehrlichii MLHE-1 methyl-accepting chemotaxis sensory transducer YP_741940.1 1281437 R 187272 CDS YP_741941.1 114320258 4269806 1283605..1285695 1 NC_008340.1 KEGG: gsu:GSU1927 sensory box/response regulator; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 1285695 4269806 Mlg_1099 Alkalilimnicola ehrlichii MLHE-1 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_741941.1 1283605 D 187272 CDS YP_741942.1 114320259 4269807 complement(1285718..1286803) 1 NC_008340.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: psb:Psyr_3902 ABC transporter TobE; ABC transporter-like protein 1286803 4269807 Mlg_1100 Alkalilimnicola ehrlichii MLHE-1 ABC transporter-like protein YP_741942.1 1285718 R 187272 CDS YP_741943.1 114320260 4269808 complement(1286806..1287717) 1 NC_008340.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 1287717 4269808 Mlg_1101 Alkalilimnicola ehrlichii MLHE-1 ornithine carbamoyltransferase YP_741943.1 1286806 R 187272 CDS YP_741944.1 114320261 4269809 complement(1287740..1288924) 1 NC_008340.1 catalyzes the formation of N-acetyl-l-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine aminotransferase 1288924 4269809 Mlg_1102 Alkalilimnicola ehrlichii MLHE-1 acetylornithine aminotransferase YP_741944.1 1287740 R 187272 CDS YP_741945.1 114320262 4269810 complement(1289148..1289756) 1 NC_008340.1 PFAM: manganese and iron superoxide dismutase; KEGG: tcx:Tcr_0237 superoxide dismutase; superoxide dismutase 1289756 4269810 Mlg_1103 Alkalilimnicola ehrlichii MLHE-1 superoxide dismutase YP_741945.1 1289148 R 187272 CDS YP_741946.1 114320263 4269811 1290016..1291551 1 NC_008340.1 PFAM: Hydantoinase B/oxoprolinase; KEGG: pca:Pcar_3104 N-methylhydantoinase B; 5-oxoprolinase 1291551 4269811 Mlg_1104 Alkalilimnicola ehrlichii MLHE-1 5-oxoprolinase YP_741946.1 1290016 D 187272 CDS YP_741947.1 114320264 4269812 1291610..1292299 1 NC_008340.1 TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: son:SO1558 phosphate regulon response regulator PhoB; two component transcriptional regulator 1292299 4269812 Mlg_1105 Alkalilimnicola ehrlichii MLHE-1 two component transcriptional regulator YP_741947.1 1291610 D 187272 CDS YP_741948.1 114320265 4269813 1292300..1293631 1 NC_008340.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: pfo:Pfl_5607 PAS/PAC sensor signal transduction histidine kinase; PAS/PAC sensor signal transduction histidine kinase 1293631 4269813 Mlg_1106 Alkalilimnicola ehrlichii MLHE-1 PAS/PAC sensor signal transduction histidine kinase YP_741948.1 1292300 D 187272 CDS YP_741949.1 114320266 4269814 1293897..1294304 1 NC_008340.1 KEGG: neu:NE1129 hypothetical protein; hypothetical protein 1294304 4269814 Mlg_1107 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741949.1 1293897 D 187272 CDS YP_741950.1 114320267 4269815 1294330..1295484 1 NC_008340.1 KEGG: neu:NE1130 hypothetical protein; hypothetical protein 1295484 4269815 Mlg_1108 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741950.1 1294330 D 187272 CDS YP_741951.1 114320268 4269816 1295509..1298337 1 NC_008340.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; KEGG: noc:Noc_0335 PAS sensor diguanylate cyclase/phosphodiesterase; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 1298337 4269816 Mlg_1109 Alkalilimnicola ehrlichii MLHE-1 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_741951.1 1295509 D 187272 CDS YP_741952.1 114320269 4269817 complement(1298348..1300456) 1 NC_008340.1 KEGG: bth:BT1890 hypothetical protein; hypothetical protein 1300456 4269817 Mlg_1110 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741952.1 1298348 R 187272 CDS YP_741953.1 114320270 4269835 1300612..1300881 1 NC_008340.1 hypothetical protein 1300881 4269835 Mlg_1111 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741953.1 1300612 D 187272 CDS YP_741954.1 114320271 4269836 1301171..1302439 1 NC_008340.1 KEGG: bja:bll8095 two-component hybrid sensor and regulator; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 1302439 4269836 Mlg_1112 Alkalilimnicola ehrlichii MLHE-1 PAS/PAC sensor signal transduction histidine kinase YP_741954.1 1301171 D 187272 CDS YP_741955.1 114320272 4269837 1302555..1303514 1 NC_008340.1 TIGRFAM: phosphate binding protein; KEGG: son:SO1560 phosphate-binding protein; phosphate binding protein 1303514 4269837 Mlg_1113 Alkalilimnicola ehrlichii MLHE-1 phosphate binding protein YP_741955.1 1302555 D 187272 CDS YP_741956.1 114320273 4269838 complement(1303607..1304704) 1 NC_008340.1 PFAM: porin, Gram-negative type; KEGG: tbd:Tbd_0448 outer membrane protein (porin); porin 1304704 4269838 Mlg_1114 Alkalilimnicola ehrlichii MLHE-1 porin YP_741956.1 1303607 R 187272 CDS YP_741957.1 114320274 4269839 complement(1304884..1305636) 1 NC_008340.1 PFAM: cyclic nucleotide-binding; SMART: regulatory protein, Crp; KEGG: bxe:Bxe_C0542 transcriptional regulator, Crp/Fnr family; Crp/Fnr family transcriptional regulator 1305636 4269839 Mlg_1115 Alkalilimnicola ehrlichii MLHE-1 Crp/Fnr family transcriptional regulator YP_741957.1 1304884 R 187272 CDS YP_741958.1 114320275 4269840 1305923..1307407 1 NC_008340.1 KEGG: dar:Daro_2048 PAS:GGDEF; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase 1307407 4269840 Mlg_1116 Alkalilimnicola ehrlichii MLHE-1 PAS/PAC sensor-containing diguanylate cyclase YP_741958.1 1305923 D 187272 CDS YP_741959.1 114320276 4269841 1307473..1308054 1 NC_008340.1 SMART: PAS domain containing protein; KEGG: gme:Gmet_0779 PAS/PAC sensor signal transduction histidine kinase; PAS/PAC sensor protein 1308054 4269841 Mlg_1117 Alkalilimnicola ehrlichii MLHE-1 PAS/PAC sensor protein YP_741959.1 1307473 D 187272 CDS YP_741960.1 114320277 4269842 1308051..1310609 1 NC_008340.1 TIGRFAM: PAS sensor protein; PFAM: CheB methylesterase; MCP methyltransferase, CheR-type; PAS fold-4 domain protein; KEGG: gme:Gmet_0780 MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor; MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor 1310609 4269842 Mlg_1118 Alkalilimnicola ehrlichii MLHE-1 MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor YP_741960.1 1308051 D 187272 CDS YP_741961.1 114320278 4269843 1311257..1311571 1 NC_008340.1 PFAM: transport-associated; KEGG: dar:Daro_2047 transport-associated; transport-associated 1311571 4269843 Mlg_1119 Alkalilimnicola ehrlichii MLHE-1 transport-associated YP_741961.1 1311257 D 187272 CDS YP_741962.1 114320279 4269845 1312090..1314324 1 NC_008340.1 KEGG: pae:PA2624 isocitrate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: Isocitrate dehydrogenase NADP-dependent, monomeric type; isocitrate dehydrogenase, NADP-dependent 1314324 4269845 Mlg_1121 Alkalilimnicola ehrlichii MLHE-1 isocitrate dehydrogenase, NADP-dependent YP_741962.1 1312090 D 187272 CDS YP_741963.1 114320280 4269846 complement(1314395..1314643) 1 NC_008340.1 hypothetical protein 1314643 4269846 Mlg_1122 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741963.1 1314395 R 187272 CDS YP_741964.1 114320281 4269847 complement(1314633..1315634) 1 NC_008340.1 PFAM: Death-on-curing protein; KEGG: noc:Noc_1805 death-on-curing protein; death-on-curing protein 1315634 4269847 Mlg_1123 Alkalilimnicola ehrlichii MLHE-1 death-on-curing protein YP_741964.1 1314633 R 187272 CDS YP_741965.1 114320282 4269848 complement(1315823..1318204) 1 NC_008340.1 SMART: AAA ATPase; KEGG: csa:Csal_1077 hypothetical protein; ATPase AAA 1318204 4269848 Mlg_1124 Alkalilimnicola ehrlichii MLHE-1 ATPase AAA YP_741965.1 1315823 R 187272 CDS YP_741966.1 114320283 4269849 complement(1318201..1318572) 1 NC_008340.1 KEGG: bbr:BB1852 hypothetical protein; hypothetical protein 1318572 4269849 Mlg_1125 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741966.1 1318201 R 187272 CDS YP_741967.1 114320284 4269850 complement(1318597..1318806) 1 NC_008340.1 KEGG: csa:Csal_0087 type III restriction enzyme, res subunit; hypothetical protein 1318806 4269850 Mlg_1126 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741967.1 1318597 R 187272 CDS YP_741968.1 114320285 4269851 complement(1318796..1319302) 1 NC_008340.1 PFAM: OsmC family protein; KEGG: rpa:RPA2621 hypothetical protein; OsmC family protein 1319302 4269851 Mlg_1127 Alkalilimnicola ehrlichii MLHE-1 OsmC family protein YP_741968.1 1318796 R 187272 CDS YP_741969.1 114320286 4269624 complement(1319824..1321512) 1 NC_008340.1 PFAM: transposase, IS4 family protein; KEGG: eba:ebA575 transposase, IS4 family; transposase, IS4 family protein 1321512 4269624 Mlg_1129 Alkalilimnicola ehrlichii MLHE-1 transposase, IS4 family protein YP_741969.1 1319824 R 187272 CDS YP_741970.1 114320287 4269625 complement(1321557..1322156) 1 NC_008340.1 PFAM: NERD domain protein; KEGG: noc:Noc_0649 DNA topoisomerase I; NERD domain-containing protein 1322156 4269625 Mlg_1130 Alkalilimnicola ehrlichii MLHE-1 NERD domain-containing protein YP_741970.1 1321557 R 187272 CDS YP_741971.1 114320288 4269626 complement(1322690..1323583) 1 NC_008340.1 KEGG: vvu:VV12414 hypothetical protein; hypothetical protein 1323583 4269626 Mlg_1131 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741971.1 1322690 R 187272 CDS YP_741972.1 114320289 4269627 complement(1323659..1324309) 1 NC_008340.1 KEGG: pst:PSPTO0582 hypothetical protein; hypothetical protein 1324309 4269627 Mlg_1132 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741972.1 1323659 R 187272 CDS YP_741973.1 114320290 4269629 complement(1325259..1326170) 1 NC_008340.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: nmu:Nmul_A0104 Sel1-like repeat; Sel1 domain-containing protein 1326170 4269629 Mlg_1134 Alkalilimnicola ehrlichii MLHE-1 Sel1 domain-containing protein YP_741973.1 1325259 R 187272 CDS YP_741974.1 114320291 4269630 1326308..1328623 1 NC_008340.1 PFAM: binding-protein-dependent transport systems inner membrane component; SMART: WD-40 repeat protein; KEGG: noc:Noc_2398 ABC transporter, inner membrane subunit; binding-protein-dependent transport systems inner membrane component 1328623 4269630 Mlg_1135 Alkalilimnicola ehrlichii MLHE-1 binding-protein-dependent transport systems inner membrane component YP_741974.1 1326308 D 187272 CDS YP_741975.1 114320292 4269631 1328693..1330360 1 NC_008340.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pae:PA5367 phosphate transport system permease; phosphate ABC transporter, inner membrane subunit PstA 1330360 4269631 Mlg_1136 Alkalilimnicola ehrlichii MLHE-1 phosphate ABC transporter, inner membrane subunit PstA YP_741975.1 1328693 D 187272 CDS YP_741976.1 114320293 4269632 1330449..1331306 1 NC_008340.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein 1331306 4269632 Mlg_1137 Alkalilimnicola ehrlichii MLHE-1 phosphate transporter ATP-binding protein YP_741976.1 1330449 D 187272 CDS YP_741977.1 114320294 4269633 1331574..1332296 1 NC_008340.1 TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: noc:Noc_2395 phosphate transport system protein, PhoU; phosphate uptake regulator PhoU 1332296 4269633 Mlg_1138 Alkalilimnicola ehrlichii MLHE-1 phosphate uptake regulator PhoU YP_741977.1 1331574 D 187272 CDS YP_741978.1 114320295 4269634 complement(1332466..1333476) 1 NC_008340.1 KEGG: pfo:Pfl_2628 hypothetical protein; hypothetical protein 1333476 4269634 Mlg_1139 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741978.1 1332466 R 187272 CDS YP_741979.1 114320296 4269635 complement(1333535..1335151) 1 NC_008340.1 KEGG: pfo:Pfl_2629 hypothetical protein; hypothetical protein 1335151 4269635 Mlg_1140 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741979.1 1333535 R 187272 CDS YP_741980.1 114320297 4269636 complement(1335156..1336169) 1 NC_008340.1 KEGG: pfo:Pfl_2625 hypothetical protein; hypothetical protein 1336169 4269636 Mlg_1141 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741980.1 1335156 R 187272 CDS YP_741981.1 114320298 4269637 complement(1336220..1337359) 1 NC_008340.1 KEGG: pfo:Pfl_2629 hypothetical protein; hypothetical protein 1337359 4269637 Mlg_1142 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741981.1 1336220 R 187272 CDS YP_741982.1 114320299 4269638 complement(1337415..1339508) 1 NC_008340.1 KEGG: pfo:Pfl_2629 hypothetical protein; hypothetical protein 1339508 4269638 Mlg_1143 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741982.1 1337415 R 187272 CDS YP_741983.1 114320300 4269639 complement(1339505..1340296) 1 NC_008340.1 KEGG: pfo:Pfl_2630 hypothetical protein; hypothetical protein 1340296 4269639 Mlg_1144 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741983.1 1339505 R 187272 CDS YP_741984.1 114320301 4269640 complement(1340275..1342395) 1 NC_008340.1 PFAM: Rhs element Vgr protein; KEGG: eca:ECA2104 VgrG protein; Rhs element Vgr protein 1342395 4269640 Mlg_1145 Alkalilimnicola ehrlichii MLHE-1 Rhs element Vgr protein YP_741984.1 1340275 R 187272 CDS YP_741985.1 114320302 4270652 complement(1342527..1343135) 1 NC_008340.1 hypothetical protein 1343135 4270652 Mlg_1146 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741985.1 1342527 R 187272 CDS YP_741986.1 114320303 4270653 complement(1343299..1344093) 1 NC_008340.1 KEGG: cgl:NCgl1354 TPR-repeat-containing protein; hypothetical protein 1344093 4270653 Mlg_1147 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741986.1 1343299 R 187272 CDS YP_741987.1 114320304 4270654 1344200..1344943 1 NC_008340.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: eba:ebA4468 DNA-binding response regulator OmpR; two component transcriptional regulator 1344943 4270654 Mlg_1148 Alkalilimnicola ehrlichii MLHE-1 two component transcriptional regulator YP_741987.1 1344200 D 187272 CDS YP_741988.1 114320305 4270655 1344943..1346307 1 NC_008340.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: eba:ebA4466 predicted histidine kinase-like ATPase; periplasmic sensor signal transduction histidine kinase 1346307 4270655 Mlg_1149 Alkalilimnicola ehrlichii MLHE-1 periplasmic sensor signal transduction histidine kinase YP_741988.1 1344943 D 187272 CDS YP_741989.1 114320306 4270656 1346364..1346918 1 NC_008340.1 PFAM: membrane-flanked domain; KEGG: sde:Sde_3048 hypothetical protein; membrane-flanked domain-containing protein 1346918 4270656 Mlg_1150 Alkalilimnicola ehrlichii MLHE-1 membrane-flanked domain-containing protein YP_741989.1 1346364 D 187272 CDS YP_741990.1 114320307 4270657 1346908..1348509 1 NC_008340.1 PFAM: membrane-flanked domain; KEGG: sde:Sde_3047 serine/threonine protein kinase; membrane-flanked domain-containing protein 1348509 4270657 Mlg_1151 Alkalilimnicola ehrlichii MLHE-1 membrane-flanked domain-containing protein YP_741990.1 1346908 D 187272 CDS YP_741991.1 114320308 4270658 complement(1348524..1349978) 1 NC_008340.1 PFAM: chemotaxis sensory transducer; KEGG: bxe:Bxe_A1954 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1349978 4270658 Mlg_1152 Alkalilimnicola ehrlichii MLHE-1 methyl-accepting chemotaxis sensory transducer YP_741991.1 1348524 R 187272 CDS YP_741992.1 114320309 4270659 complement(1350000..1351424) 1 NC_008340.1 PFAM: chemotaxis sensory transducer; KEGG: bxe:Bxe_A1954 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1351424 4270659 Mlg_1153 Alkalilimnicola ehrlichii MLHE-1 methyl-accepting chemotaxis sensory transducer YP_741992.1 1350000 R 187272 CDS YP_741993.1 114320310 4270660 1351843..1354173 1 NC_008340.1 KEGG: hch:HCH_06250 penicillin-binding protein 1B; TIGRFAM: penicillin-binding protein 1B; PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; penicillin-binding protein 1B 1354173 4270660 Mlg_1154 Alkalilimnicola ehrlichii MLHE-1 penicillin-binding protein 1B YP_741993.1 1351843 D 187272 CDS YP_741994.1 114320311 4270661 1354230..1354727 1 NC_008340.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: psp:PSPPH_0869 hypothetical protein; TPR repeat-containing protein 1354727 4270661 Mlg_1155 Alkalilimnicola ehrlichii MLHE-1 TPR repeat-containing protein YP_741994.1 1354230 D 187272 CDS YP_741995.1 114320312 4270662 1354724..1356673 1 NC_008340.1 SMART: helicase c2; KEGG: noc:Noc_1364 helicase C2; helicase c2 1356673 4270662 Mlg_1156 Alkalilimnicola ehrlichii MLHE-1 helicase c2 YP_741995.1 1354724 D 187272 CDS YP_741996.1 114320313 4270663 1356657..1357055 1 NC_008340.1 KEGG: sdy:SDY_3469 hypothetical protein; hypothetical protein 1357055 4270663 Mlg_1157 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741996.1 1356657 D 187272 CDS YP_741997.1 114320314 4270664 complement(1357091..1358179) 1 NC_008340.1 KEGG: aba:Acid345_0200 hypothetical protein; hypothetical protein 1358179 4270664 Mlg_1158 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_741997.1 1357091 R 187272 CDS YP_741998.1 114320315 4270665 1358249..1358677 1 NC_008340.1 SMART: Mov34/MPN/PAD-1 family protein; KEGG: syf:Synpcc7942_0159 Mov34/MPN/PAD-1; Mov34/MPN/PAD-1 family protein 1358677 4270665 Mlg_1159 Alkalilimnicola ehrlichii MLHE-1 Mov34/MPN/PAD-1 family protein YP_741998.1 1358249 D 187272 CDS YP_741999.1 114320316 4270666 1358659..1360101 1 NC_008340.1 ATP-dependent adenylate transferase, transfers adenyl moiety to the MoeD subunit of molybdopterin synthase; molybdopterin biosynthesis protein MoeB 1360101 4270666 Mlg_1160 Alkalilimnicola ehrlichii MLHE-1 molybdopterin biosynthesis protein MoeB YP_741999.1 1358659 D 187272 CDS YP_742000.1 114320317 4270667 complement(1360165..1360446) 1 NC_008340.1 KEGG: dar:Daro_0835 hypothetical protein; hypothetical protein 1360446 4270667 Mlg_1161 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742000.1 1360165 R 187272 CDS YP_742001.1 114320318 4270668 complement(1360587..1361474) 1 NC_008340.1 KEGG: bpa:BPP4036 cytochrome c; cytochrome c 1361474 4270668 Mlg_1162 Alkalilimnicola ehrlichii MLHE-1 cytochrome c YP_742001.1 1360587 R 187272 CDS YP_742002.1 114320319 4270669 complement(1361485..1361934) 1 NC_008340.1 PFAM: cytochrome c, class II; KEGG: rru:Rru_A2256 cytochrome c, class II; cytochrome c, class II 1361934 4270669 Mlg_1163 Alkalilimnicola ehrlichii MLHE-1 cytochrome c, class II YP_742002.1 1361485 R 187272 CDS YP_742003.1 114320320 4269103 1362178..1362780 1 NC_008340.1 KEGG: noc:Noc_0119 hypothetical protein; hypothetical protein 1362780 4269103 Mlg_1164 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742003.1 1362178 D 187272 CDS YP_742004.1 114320321 4269104 1362948..1363391 1 NC_008340.1 KEGG: cvi:CV3473 hypothetical protein; hypothetical protein 1363391 4269104 Mlg_1165 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742004.1 1362948 D 187272 CDS YP_742005.1 114320322 4269105 complement(1363402..1364685) 1 NC_008340.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: vpa:VP2536 hemolysin; hypothetical protein 1364685 4269105 Mlg_1166 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742005.1 1363402 R 187272 CDS YP_742006.1 114320323 4269106 complement(1364689..1365147) 1 NC_008340.1 PFAM: Cupin 2, conserved barrel domain protein; KEGG: rru:Rru_A2000 hypothetical protein; cupin 1365147 4269106 Mlg_1167 Alkalilimnicola ehrlichii MLHE-1 cupin YP_742006.1 1364689 R 187272 CDS YP_742007.1 114320324 4269107 complement(1365149..1366246) 1 NC_008340.1 PFAM: ribulose bisphosphate carboxylase, large chain; KEGG: rru:Rru_A1998 ribulose-bisphosphate carboxylase-like protein; rubisco-like protein; ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit 1366246 4269107 Mlg_1168 Alkalilimnicola ehrlichii MLHE-1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit YP_742007.1 1365149 R 187272 CDS YP_742008.1 114320325 4269108 complement(1366243..1367139) 1 NC_008340.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: pae:PA2628 hypothetical protein; hypothetical protein 1367139 4269108 Mlg_1169 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742008.1 1366243 R 187272 CDS YP_742009.1 114320326 4269109 complement(1367132..1368229) 1 NC_008340.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: xac:XAC1488 sensor histidine kinase; diguanylate cyclase 1368229 4269109 Mlg_1170 Alkalilimnicola ehrlichii MLHE-1 diguanylate cyclase YP_742009.1 1367132 R 187272 CDS YP_742010.1 114320327 4269110 complement(1368226..1368531) 1 NC_008340.1 hypothetical protein 1368531 4269110 Mlg_1171 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742010.1 1368226 R 187272 CDS YP_742011.1 114320328 4269111 1368656..1369141 1 NC_008340.1 regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity; ribonuclease activity regulator protein RraA 1369141 4269111 Mlg_1172 Alkalilimnicola ehrlichii MLHE-1 ribonuclease activity regulator protein RraA YP_742011.1 1368656 D 187272 CDS YP_742012.1 114320329 4269112 1369166..1369576 1 NC_008340.1 PFAM: RNA-binding S4 domain protein; KEGG: pol:Bpro_2006 RNA-binding S4; RNA-binding S4 domain-containing protein 1369576 4269112 Mlg_1173 Alkalilimnicola ehrlichii MLHE-1 RNA-binding S4 domain-containing protein YP_742012.1 1369166 D 187272 CDS YP_742013.1 114320330 4269113 1369597..1369980 1 NC_008340.1 hypothetical protein 1369980 4269113 Mlg_1174 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742013.1 1369597 D 187272 CDS YP_742014.1 114320331 4269114 complement(1370677..1373754) 1 NC_008340.1 KEGG: tbd:Tbd_0828 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP C-terminal domain protein; nucleic acid binding, OB-fold, tRNA/helicase-type; SMART: phosphoesterase PHP domain protein; DNA polymerase III subunit alpha 1373754 4269114 Mlg_1175 Alkalilimnicola ehrlichii MLHE-1 DNA polymerase III subunit alpha YP_742014.1 1370677 R 187272 CDS YP_742015.1 114320332 4269115 complement(1373849..1375087) 1 NC_008340.1 TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: hch:HCH_04222 permease of the major facilitator superfamily; Bcr/CflA subfamily drug resistance transporter 1375087 4269115 Mlg_1176 Alkalilimnicola ehrlichii MLHE-1 Bcr/CflA subfamily drug resistance transporter YP_742015.1 1373849 R 187272 CDS YP_742016.1 114320333 4269116 1375173..1376477 1 NC_008340.1 PFAM: PEP-utilizing enzyme; KEGG: cvi:CV0558 probable phosphoenolpyruvate-protein phosphotransferase; phosphoenolpyruvate--protein phosphotransferase 1376477 4269116 Mlg_1177 Alkalilimnicola ehrlichii MLHE-1 phosphoenolpyruvate--protein phosphotransferase YP_742016.1 1375173 D 187272 CDS YP_742017.1 114320334 4269117 complement(1376515..1376727) 1 NC_008340.1 hypothetical protein 1376727 4269117 Mlg_1178 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742017.1 1376515 R 187272 CDS YP_742018.1 114320335 4269118 complement(1376738..1377961) 1 NC_008340.1 PFAM: protein of unknown function DUF395, YeeE/YedE; KEGG: sme:SMb21550 hypothetical protein; hypothetical protein 1377961 4269118 Mlg_1179 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742018.1 1376738 R 187272 CDS YP_742019.1 114320336 4269119 complement(1378040..1378999) 1 NC_008340.1 PFAM: Rhodanese domain protein; KEGG: sme:SMb21549 exported sulfurtransferase, rhodanese protein; thiosulfate sulfurtransferase 1378999 4269119 Mlg_1180 Alkalilimnicola ehrlichii MLHE-1 thiosulfate sulfurtransferase YP_742019.1 1378040 R 187272 CDS YP_742020.1 114320337 4270316 1379257..1380666 1 NC_008340.1 Catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 1380666 4270316 Mlg_1181 Alkalilimnicola ehrlichii MLHE-1 dihydrolipoamide dehydrogenase YP_742020.1 1379257 D 187272 CDS YP_742021.1 114320338 4270317 complement(1380734..1381207) 1 NC_008340.1 PFAM: cyclic nucleotide-binding; KEGG: sco:SCO7310 regulatory protein; cyclic nucleotide-binding protein 1381207 4270317 Mlg_1182 Alkalilimnicola ehrlichii MLHE-1 cyclic nucleotide-binding protein YP_742021.1 1380734 R 187272 CDS YP_742022.1 114320339 4270318 1381479..1381784 1 NC_008340.1 PFAM: protein of unknown function DUF77; KEGG: gsu:GSU1562 conserved hypothetical protein TIGR00106; hypothetical protein 1381784 4270318 Mlg_1183 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742022.1 1381479 D 187272 CDS YP_742023.1 114320340 4270319 1381781..1382188 1 NC_008340.1 KEGG: hch:HCH_00195 hypothetical protein; hypothetical protein 1382188 4270319 Mlg_1184 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742023.1 1381781 D 187272 CDS YP_742024.1 114320341 4270320 1382497..1383867 1 NC_008340.1 PFAM: Radical SAM domain protein; KEGG: ilo:IL1509 lysine 2,3-aminomutase related protein enzyme; L-lysine 2,3-aminomutase 1383867 4270320 Mlg_1185 Alkalilimnicola ehrlichii MLHE-1 L-lysine 2,3-aminomutase YP_742024.1 1382497 D 187272 CDS YP_742025.1 114320342 4270321 1383991..1385115 1 NC_008340.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rru:Rru_A2095 secretion protein HlyD; RND family efflux transporter MFP subunit 1385115 4270321 Mlg_1186 Alkalilimnicola ehrlichii MLHE-1 RND family efflux transporter MFP subunit YP_742025.1 1383991 D 187272 CDS YP_742026.1 114320343 4270322 1385122..1388232 1 NC_008340.1 PFAM: acriflavin resistance protein; KEGG: rru:Rru_A2094 acriflavin resistance protein; acriflavin resistance protein 1388232 4270322 Mlg_1187 Alkalilimnicola ehrlichii MLHE-1 acriflavin resistance protein YP_742026.1 1385122 D 187272 CDS YP_742027.1 114320344 4270323 1388288..1390015 1 NC_008340.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: gvi:gll4077 hypothetical protein; endonuclease/exonuclease/phosphatase 1390015 4270323 Mlg_1188 Alkalilimnicola ehrlichii MLHE-1 endonuclease/exonuclease/phosphatase YP_742027.1 1388288 D 187272 CDS YP_742028.1 114320345 4270324 complement(1390033..1391025) 1 NC_008340.1 KEGG: sat:SYN_02063 outer membrane protein; outer membrane protein 1391025 4270324 Mlg_1189 Alkalilimnicola ehrlichii MLHE-1 outer membrane protein YP_742028.1 1390033 R 187272 CDS YP_742029.1 114320346 4270325 1391138..1391536 1 NC_008340.1 N-acetyldiaminobutyrate dehydratase; catalyzes the formation of the osmoprotectant ecotoine from gamma-N-acetyl-alpha,gamma-diaminobutyric acid; L-ectoine synthase 1391536 ectC 4270325 ectC Alkalilimnicola ehrlichii MLHE-1 L-ectoine synthase YP_742029.1 1391138 D 187272 CDS YP_742030.1 114320347 4270326 complement(1391637..1392959) 1 NC_008340.1 catalyzes the reversible formation of diaminobutyrate and 2-oxoglutarate from glutamate and L-aspartic beta-semialdehyde; diaminobutyrate--2-oxoglutarate aminotransferase 1392959 4270326 Mlg_1191 Alkalilimnicola ehrlichii MLHE-1 diaminobutyrate--2-oxoglutarate aminotransferase YP_742030.1 1391637 R 187272 CDS YP_742031.1 114320348 4270327 complement(1393015..1393659) 1 NC_008340.1 TIGRFAM: L-2,4-diaminobutyric acid acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: noc:Noc_1562 proteinase inhibitor I3, Kunitz legume; L-2,4-diaminobutyric acid acetyltransferase 1393659 4270327 Mlg_1192 Alkalilimnicola ehrlichii MLHE-1 L-2,4-diaminobutyric acid acetyltransferase YP_742031.1 1393015 R 187272 CDS YP_742032.1 114320349 4270328 1393870..1394559 1 NC_008340.1 PFAM: peptidase M22, glycoprotease; KEGG: noc:Noc_0917 peptidase M22, glycoprotease; peptidase M22, glycoprotease 1394559 4270328 Mlg_1193 Alkalilimnicola ehrlichii MLHE-1 peptidase M22, glycoprotease YP_742032.1 1393870 D 187272 CDS YP_742033.1 114320350 4270329 complement(1394611..1395600) 1 NC_008340.1 PFAM: periplasmic solute binding protein; KEGG: atc:AGR_C_2805 adhesin; periplasmic solute binding protein 1395600 4270329 Mlg_1194 Alkalilimnicola ehrlichii MLHE-1 periplasmic solute binding protein YP_742033.1 1394611 R 187272 CDS YP_742034.1 114320351 4270330 1395722..1396210 1 NC_008340.1 PFAM: ferric-uptake regulator; KEGG: noc:Noc_2424 ferric-uptake regulator; ferric uptake regulator family protein 1396210 4270330 Mlg_1195 Alkalilimnicola ehrlichii MLHE-1 ferric uptake regulator family protein YP_742034.1 1395722 D 187272 CDS YP_742035.1 114320352 4270331 1396198..1396977 1 NC_008340.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pae:PA5500 zinc transport system ATP-binding protein; ABC transporter-like protein 1396977 4270331 Mlg_1196 Alkalilimnicola ehrlichii MLHE-1 ABC transporter-like protein YP_742035.1 1396198 D 187272 CDS YP_742036.1 114320353 4270332 1396970..1397791 1 NC_008340.1 PFAM: ABC-3 protein; KEGG: pfl:PFL_0076 zinc ABC transporter, permease; ABC-3 protein 1397791 4270332 Mlg_1197 Alkalilimnicola ehrlichii MLHE-1 ABC-3 protein YP_742036.1 1396970 D 187272 CDS YP_742037.1 114320354 4270333 complement(1397819..1398634) 1 NC_008340.1 KEGG: pol:Bpro_1681 hypothetical protein; hypothetical protein 1398634 4270333 Mlg_1198 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742037.1 1397819 R 187272 CDS YP_742038.1 114320355 4270687 complement(1398723..1400129) 1 NC_008340.1 PFAM: protein of unknown function DUF214; KEGG: pol:Bpro_1679 protein of unknown function DUF214; hypothetical protein 1400129 4270687 Mlg_1199 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742038.1 1398723 R 187272 CDS YP_742039.1 114320356 4270688 complement(1400126..1400773) 1 NC_008340.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pol:Bpro_1678 ABC transporter related; ABC transporter-like protein 1400773 4270688 Mlg_1200 Alkalilimnicola ehrlichii MLHE-1 ABC transporter-like protein YP_742039.1 1400126 R 187272 CDS YP_742040.1 114320357 4270689 complement(1400899..1401327) 1 NC_008340.1 PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers; phosphoribosyl-AMP cyclohydrolase 1401327 hisI 4270689 hisI Alkalilimnicola ehrlichii MLHE-1 phosphoribosyl-AMP cyclohydrolase YP_742040.1 1400899 R 187272 CDS YP_742041.1 114320358 4270690 complement(1401330..1401956) 1 NC_008340.1 KEGG: cbu:CBU_0730 hypothetical protein; ABC transporter auxiliary component-like protein 1401956 4270690 Mlg_1202 Alkalilimnicola ehrlichii MLHE-1 ABC transporter auxiliary component-like protein YP_742041.1 1401330 R 187272 CDS YP_742042.1 114320359 4270691 complement(1401958..1402890) 1 NC_008340.1 PFAM: Mammalian cell entry related domain protein; KEGG: cbu:CBU_0729 conserved hypothetical protein; hypothetical protein 1402890 4270691 Mlg_1203 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742042.1 1401958 R 187272 CDS YP_742043.1 114320360 4270692 complement(1402892..1403665) 1 NC_008340.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: xoo:XOO0805 ABC transporter ATP-binding protein; ABC transporter-like protein 1403665 4270692 Mlg_1204 Alkalilimnicola ehrlichii MLHE-1 ABC transporter-like protein YP_742043.1 1402892 R 187272 CDS YP_742044.1 114320361 4270693 complement(1403662..1404795) 1 NC_008340.1 PFAM: protein of unknown function DUF140; KEGG: dvu:DVU0612 STAS domain protein; hypothetical protein 1404795 4270693 Mlg_1205 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742044.1 1403662 R 187272 CDS YP_742045.1 114320362 4270694 1404913..1406454 1 NC_008340.1 KEGG: noc:Noc_0379 hypothetical protein; hypothetical protein 1406454 4270694 Mlg_1206 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742045.1 1404913 D 187272 CDS YP_742046.1 114320363 4270695 1406491..1407858 1 NC_008340.1 TIGRFAM: glutamate--cysteine ligase; PFAM: glutamate--cysteine ligase, GCS2; KEGG: rru:Rru_A0570 glutamate--cysteine ligase; glutamate--cysteine ligase 1407858 4270695 Mlg_1207 Alkalilimnicola ehrlichii MLHE-1 glutamate--cysteine ligase YP_742046.1 1406491 D 187272 CDS YP_742047.1 114320364 4270696 1407958..1408938 1 NC_008340.1 PFAM: protein of unknown function DUF523; Protein of unknown function DUF1722; KEGG: noc:Noc_0394 protein of unknown function DUF523; hypothetical protein 1408938 4270696 Mlg_1208 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742047.1 1407958 D 187272 CDS YP_742048.1 114320365 4270697 1408982..1410238 1 NC_008340.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: noc:Noc_2937 secretion protein HlyD; RND family efflux transporter MFP subunit 1410238 4270697 Mlg_1209 Alkalilimnicola ehrlichii MLHE-1 RND family efflux transporter MFP subunit YP_742048.1 1408982 D 187272 CDS YP_742049.1 114320366 4270698 1410235..1413459 1 NC_008340.1 PFAM: acriflavin resistance protein; KEGG: noc:Noc_2936 acriflavin resistance protein; acriflavin resistance protein 1413459 4270698 Mlg_1210 Alkalilimnicola ehrlichii MLHE-1 acriflavin resistance protein YP_742049.1 1410235 D 187272 CDS YP_742050.1 114320367 4270699 1413452..1414207 1 NC_008340.1 PFAM: molybdopterin binding domain; KEGG: eba:ebA4355 predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; molybdopterin binding domain-containing protein 1414207 4270699 Mlg_1211 Alkalilimnicola ehrlichii MLHE-1 molybdopterin binding domain-containing protein YP_742050.1 1413452 D 187272 CDS YP_742051.1 114320368 4270700 1414204..1414440 1 NC_008340.1 hypothetical protein 1414440 4270700 Mlg_1212 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742051.1 1414204 D 187272 CDS YP_742052.1 114320369 4270701 complement(1414484..1415680) 1 NC_008340.1 PFAM: protein of unknown function DUF1228; major facilitator superfamily MFS_1; KEGG: cps:CPS_1909 major facilitator family transporter; major facilitator transporter 1415680 4270701 Mlg_1213 Alkalilimnicola ehrlichii MLHE-1 major facilitator transporter YP_742052.1 1414484 R 187272 CDS YP_742053.1 114320370 4269745 1415972..1417009 1 NC_008340.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1417009 queA 4269745 queA Alkalilimnicola ehrlichii MLHE-1 S-adenosylmethionine:tRNA ribosyltransferase-isomerase YP_742053.1 1415972 D 187272 CDS YP_742054.1 114320371 4269746 1417002..1418159 1 NC_008340.1 KEGG: pfo:Pfl_4621 queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylases, various specificities; queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase; queuine tRNA-ribosyltransferase 1418159 4269746 Mlg_1215 Alkalilimnicola ehrlichii MLHE-1 queuine tRNA-ribosyltransferase YP_742054.1 1417002 D 187272 CDS YP_742055.1 114320372 4269747 1418313..1418651 1 NC_008340.1 TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: tcx:Tcr_1332 preprotein translocase, YajC subunit; protein translocase subunit yajC 1418651 4269747 Mlg_1216 Alkalilimnicola ehrlichii MLHE-1 protein translocase subunit yajC YP_742055.1 1418313 D 187272 CDS YP_742056.1 114320373 4269748 1418718..1419224 1 NC_008340.1 TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: ftl:FTL_0847 preprotein translocase; protein translocase subunit yajC 1419224 4269748 Mlg_1217 Alkalilimnicola ehrlichii MLHE-1 protein translocase subunit yajC YP_742056.1 1418718 D 187272 CDS YP_742057.1 114320374 4269749 1419252..1421117 1 NC_008340.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 1421117 secD 4269749 secD Alkalilimnicola ehrlichii MLHE-1 preprotein translocase subunit SecD YP_742057.1 1419252 D 187272 CDS YP_742058.1 114320375 4269750 1421127..1422071 1 NC_008340.1 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 1422071 secF 4269750 secF Alkalilimnicola ehrlichii MLHE-1 preprotein translocase subunit SecF YP_742058.1 1421127 D 187272 CDS YP_742059.1 114320376 4269751 1422377..1422814 1 NC_008340.1 PFAM: CBS domain containing protein; KEGG: xcb:XC_1246 hypothetical protein; signal-transduction protein 1422814 4269751 Mlg_1220 Alkalilimnicola ehrlichii MLHE-1 signal-transduction protein YP_742059.1 1422377 D 187272 CDS YP_742060.1 114320377 4269752 1422923..1424869 1 NC_008340.1 PFAM: PrkA serine kinase; PrkA AAA domain protein; KEGG: mag:amb2153 Ser protein kinase; serine protein kinase PrkA 1424869 4269752 Mlg_1221 Alkalilimnicola ehrlichii MLHE-1 serine protein kinase PrkA YP_742060.1 1422923 D 187272 CDS YP_742061.1 114320378 4269753 1424889..1426181 1 NC_008340.1 PFAM: protein of unknown function DUF444; KEGG: mag:amb2154 hypothetical protein; hypothetical protein 1426181 4269753 Mlg_1222 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742061.1 1424889 D 187272 CDS YP_742062.1 114320379 4269754 1426186..1427754 1 NC_008340.1 PFAM: SpoVR family protein; KEGG: mag:amb2155 hypothetical protein; SpoVR family protein 1427754 4269754 Mlg_1223 Alkalilimnicola ehrlichii MLHE-1 SpoVR family protein YP_742062.1 1426186 D 187272 CDS YP_742063.1 114320380 4269755 complement(1427825..1428571) 1 NC_008340.1 TIGRFAM: Glutaredoxin-family domain protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; glutaredoxin; Redoxin domain protein; KEGG: ava:Ava_4981 glutaredoxin-like region; glutaredoxin family protein 1428571 4269755 Mlg_1224 Alkalilimnicola ehrlichii MLHE-1 glutaredoxin family protein YP_742063.1 1427825 R 187272 CDS YP_742064.1 114320381 4269756 1428645..1429187 1 NC_008340.1 PFAM: GCN5-related N-acetyltransferase; KEGG: dar:Daro_0191 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase 1429187 4269756 Mlg_1225 Alkalilimnicola ehrlichii MLHE-1 GCN5-like N-acetyltransferase YP_742064.1 1428645 D 187272 CDS YP_742065.1 114320382 4269757 1429237..1430337 1 NC_008340.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 1430337 4269757 Mlg_1226 Alkalilimnicola ehrlichii MLHE-1 chorismate synthase YP_742065.1 1429237 D 187272 CDS YP_742066.1 114320383 4269758 1430337..1431479 1 NC_008340.1 PFAM: nucleoside:H+ symporter; major facilitator superfamily MFS_1; KEGG: noc:Noc_2803 nucleoside/H+ symporter, major facilitator superfamily MFS_1; major facilitator transporter 1431479 4269758 Mlg_1227 Alkalilimnicola ehrlichii MLHE-1 major facilitator transporter YP_742066.1 1430337 D 187272 CDS YP_742067.1 114320384 4269759 1431600..1433009 1 NC_008340.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 1433009 4269759 Mlg_1228 Alkalilimnicola ehrlichii MLHE-1 isopropylmalate isomerase large subunit YP_742067.1 1431600 D 187272 CDS YP_742068.1 114320385 4269760 1433087..1433743 1 NC_008340.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit 1433743 leuD 4269760 leuD Alkalilimnicola ehrlichii MLHE-1 isopropylmalate isomerase small subunit YP_742068.1 1433087 D 187272 CDS YP_742069.1 114320386 4269761 1433777..1434862 1 NC_008340.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 1434862 4269761 Mlg_1230 Alkalilimnicola ehrlichii MLHE-1 3-isopropylmalate dehydrogenase YP_742069.1 1433777 D 187272 CDS YP_742070.1 114320387 4269762 1434916..1435938 1 NC_008340.1 KEGG: tcx:Tcr_0800 aspartate-semialdehyde dehydrogenase, USG-1 related; TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase, NAD - binding; Semialdehyde dehydrogenase, dimerisation region; aspartate semialdehyde dehydrogenase 1435938 4269762 Mlg_1231 Alkalilimnicola ehrlichii MLHE-1 aspartate semialdehyde dehydrogenase YP_742070.1 1434916 D 187272 CDS YP_742071.1 114320388 4269016 1436029..1438449 1 NC_008340.1 KEGG: tbd:Tbd_1918 membrane protein; K07288 uncharacterized membrane protein; hypothetical protein 1438449 4269016 Mlg_1232 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742071.1 1436029 D 187272 CDS YP_742072.1 114320389 4269017 1438480..1439151 1 NC_008340.1 KEGG: tbd:Tbd_1917 hypothetical protein; hypothetical protein 1439151 4269017 Mlg_1233 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742072.1 1438480 D 187272 CDS YP_742073.1 114320390 4269018 1439177..1439962 1 NC_008340.1 KEGG: sgl:SG1619 pseudouridylate synthase I; TIGRFAM: tRNA pseudouridine synthase A; PFAM: tRNA pseudouridine synthase; tRNA pseudouridine synthase A 1439962 4269018 Mlg_1234 Alkalilimnicola ehrlichii MLHE-1 tRNA pseudouridine synthase A YP_742073.1 1439177 D 187272 CDS YP_742074.1 114320391 4269019 1439983..1440675 1 NC_008340.1 catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis; N-(5'-phosphoribosyl)anthranilate isomerase 1440675 4269019 Mlg_1235 Alkalilimnicola ehrlichii MLHE-1 N-(5'-phosphoribosyl)anthranilate isomerase YP_742074.1 1439983 D 187272 CDS YP_742075.1 114320392 4269020 1440656..1441891 1 NC_008340.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 1441891 4269020 Mlg_1236 Alkalilimnicola ehrlichii MLHE-1 tryptophan synthase subunit beta YP_742075.1 1440656 D 187272 CDS YP_742076.1 114320393 4269021 1441888..1442712 1 NC_008340.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 1442712 trpA 4269021 trpA Alkalilimnicola ehrlichii MLHE-1 tryptophan synthase subunit alpha YP_742076.1 1441888 D 187272 CDS YP_742077.1 114320394 4269022 1442709..1443644 1 NC_008340.1 TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; KEGG: noc:Noc_1022 acetyl-CoA carboxylase carboxyl transferase, beta subunit; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha 1443644 4269022 Mlg_1238 Alkalilimnicola ehrlichii MLHE-1 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha YP_742077.1 1442709 D 187272 CDS YP_742078.1 114320395 4269023 1443650..1444963 1 NC_008340.1 KEGG: xcb:XC_3285 folylpolyglutamate synthase/dihydrofolate synthase; TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetases domain protein; Mur ligase, middle domain protein; FolC bifunctional protein 1444963 4269023 Mlg_1239 Alkalilimnicola ehrlichii MLHE-1 FolC bifunctional protein YP_742078.1 1443650 D 187272 CDS YP_742079.1 114320396 4269024 1445002..1445688 1 NC_008340.1 PFAM: Sporulation domain protein; KEGG: pst:PSPTO3813 DedD protein; sporulation domain-containing protein 1445688 4269024 Mlg_1240 Alkalilimnicola ehrlichii MLHE-1 sporulation domain-containing protein YP_742079.1 1445002 D 187272 CDS YP_742080.1 114320397 4269025 1445763..1446356 1 NC_008340.1 PFAM: Colicin V production protein; KEGG: mca:MCA2490 CvpA family protein; colicin V production protein 1446356 4269025 Mlg_1241 Alkalilimnicola ehrlichii MLHE-1 colicin V production protein YP_742080.1 1445763 D 187272 CDS YP_742081.1 114320398 4269026 1446376..1447890 1 NC_008340.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 1447890 4269026 Mlg_1242 Alkalilimnicola ehrlichii MLHE-1 amidophosphoribosyltransferase YP_742081.1 1446376 D 187272 CDS YP_742082.1 114320399 4269027 1447898..1449118 1 NC_008340.1 catalyzes the conversion of O-succinylhomoserine into homocysteine; O-succinylhomoserine sulfhydrylase 1449118 4269027 Mlg_1243 Alkalilimnicola ehrlichii MLHE-1 O-succinylhomoserine sulfhydrylase YP_742082.1 1447898 D 187272 CDS YP_742083.1 114320400 4269028 complement(1449156..1449956) 1 NC_008340.1 PFAM: inositol monophosphatase; KEGG: mca:MCA2609 inositol monophosphatase; inositol-phosphate phosphatase 1449956 4269028 Mlg_1244 Alkalilimnicola ehrlichii MLHE-1 inositol-phosphate phosphatase YP_742083.1 1449156 R 187272 CDS YP_742084.1 114320401 4269029 1450138..1450920 1 NC_008340.1 TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: sgl:SG1771 RNA methyltransferase; RNA methyltransferase 1450920 4269029 Mlg_1245 Alkalilimnicola ehrlichii MLHE-1 RNA methyltransferase YP_742084.1 1450138 D 187272 CDS YP_742085.1 114320402 4269030 1451070..1451912 1 NC_008340.1 TIGRFAM: serine O-acetyltransferase; KEGG: pfo:Pfl_4614 serine O-acetyltransferase; serine O-acetyltransferase 1451912 4269030 Mlg_1246 Alkalilimnicola ehrlichii MLHE-1 serine O-acetyltransferase YP_742085.1 1451070 D 187272 CDS YP_742086.1 114320403 4269031 1452024..1452350 1 NC_008340.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: rso:RSc1021 hypothetical protein; iron-sulfur cluster assembly accessory protein 1452350 4269031 Mlg_1247 Alkalilimnicola ehrlichii MLHE-1 iron-sulfur cluster assembly accessory protein YP_742086.1 1452024 D 187272 CDS YP_742087.1 114320404 4269032 1452522..1452947 1 NC_008340.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 1452947 ndk 4269032 ndk Alkalilimnicola ehrlichii MLHE-1 nucleoside diphosphate kinase YP_742087.1 1452522 D 187272 CDS YP_742088.1 114320405 4269171 1452982..1454064 1 NC_008340.1 TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; KEGG: mca:MCA2887 conserved hypothetical protein TIGR00048; radical SAM protein 1454064 4269171 Mlg_1249 Alkalilimnicola ehrlichii MLHE-1 radical SAM protein YP_742088.1 1452982 D 187272 CDS YP_742089.1 114320406 4269172 1454061..1454819 1 NC_008340.1 KEGG: noc:Noc_0901 tfp pilus assembly protein PilF; TIGRFAM: type IV pilus biogenesis/stability protein PilW; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; type IV pilus biogenesis/stability protein PilW 1454819 4269172 Mlg_1250 Alkalilimnicola ehrlichii MLHE-1 type IV pilus biogenesis/stability protein PilW YP_742089.1 1454061 D 187272 CDS YP_742090.1 114320407 4269173 1454823..1455800 1 NC_008340.1 SMART: helix-turn-helix domain protein; KEGG: ilo:IL2035 predicted transcriptional regulator, contains N-terminal xre-type HTH domain; XRE family transcriptional regulator 1455800 4269173 Mlg_1251 Alkalilimnicola ehrlichii MLHE-1 XRE family transcriptional regulator YP_742090.1 1454823 D 187272 CDS YP_742091.1 114320408 4269174 1455877..1457166 1 NC_008340.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 1457166 hisS 4269174 hisS Alkalilimnicola ehrlichii MLHE-1 histidyl-tRNA synthetase YP_742091.1 1455877 D 187272 CDS YP_742092.1 114320409 4269175 1457169..1457798 1 NC_008340.1 KEGG: noc:Noc_0820 hypothetical protein; hypothetical protein 1457798 4269175 Mlg_1253 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742092.1 1457169 D 187272 CDS YP_742093.1 114320410 4269176 1457851..1459002 1 NC_008340.1 PFAM: Pyrrolo-quinoline quinone; KEGG: noc:Noc_0821 pyrrolo-quinoline quinone; Pyrrolo-quinoline quinone 1459002 4269176 Mlg_1254 Alkalilimnicola ehrlichii MLHE-1 Pyrrolo-quinoline quinone YP_742093.1 1457851 D 187272 CDS YP_742094.1 114320411 4269177 1459005..1459781 1 NC_008340.1 PFAM: protein of unknown function DUF833; KEGG: gsu:GSU0792 hypothetical protein; hypothetical protein 1459781 4269177 Mlg_1255 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742094.1 1459005 D 187272 CDS YP_742095.1 114320412 4269178 1459971..1460630 1 NC_008340.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 1460630 adk 4269178 adk Alkalilimnicola ehrlichii MLHE-1 adenylate kinase YP_742095.1 1459971 D 187272 CDS YP_742096.1 114320413 4269179 1460769..1461071 1 NC_008340.1 KEGG: hch:HCH_05060 hypothetical protein; hypothetical protein 1461071 4269179 Mlg_1257 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742096.1 1460769 D 187272 CDS YP_742097.1 114320414 4269180 1461194..1461859 1 NC_008340.1 PFAM: isochorismatase hydrolase; KEGG: noc:Noc_0271 pyrazinamidase / nicotinamidase; nicotinamidase 1461859 4269180 Mlg_1258 Alkalilimnicola ehrlichii MLHE-1 nicotinamidase YP_742097.1 1461194 D 187272 CDS YP_742098.1 114320415 4269181 1461880..1462413 1 NC_008340.1 KEGG: noc:Noc_2712 hypothetical protein; hypothetical protein 1462413 4269181 Mlg_1259 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742098.1 1461880 D 187272 CDS YP_742099.1 114320416 4269182 complement(1462451..1464127) 1 NC_008340.1 KEGG: xfa:XF1501 sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase; TIGRFAM: sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor, GTP-binding; elongation factor Tu, domain 2 protein; sulfate adenylyltransferase subunit 1 1464127 4269182 Mlg_1260 Alkalilimnicola ehrlichii MLHE-1 sulfate adenylyltransferase subunit 1 YP_742099.1 1462451 R 187272 CDS YP_742100.1 114320417 4269183 complement(1464166..1465113) 1 NC_008340.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 1465113 4269183 Mlg_1261 Alkalilimnicola ehrlichii MLHE-1 sulfate adenylyltransferase subunit 2 YP_742100.1 1464166 R 187272 CDS YP_742101.1 114320418 4269184 complement(1465110..1465964) 1 NC_008340.1 TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: pae:PA2611 uroporphyrin-III C-methyltransferase / precorrin-2 oxidase / ferrochelatase; uroporphyrinogen-III C-methyltransferase 1465964 4269184 Mlg_1262 Alkalilimnicola ehrlichii MLHE-1 uroporphyrinogen-III C-methyltransferase YP_742101.1 1465110 R 187272 CDS YP_742102.1 114320419 4269185 complement(1465967..1466704) 1 NC_008340.1 KEGG: neu:NE0855 probable 5' adenylylsulfate APS reductase; TIGRFAM: adenylylsulfate reductase, thioredoxin dependent; PFAM: phosphoadenosine phosphosulfate reductase; phosphoadenylylsulfate reductase 1466704 4269185 Mlg_1263 Alkalilimnicola ehrlichii MLHE-1 phosphoadenylylsulfate reductase YP_742102.1 1465967 R 187272 CDS YP_742103.1 114320420 4269186 1466914..1468569 1 NC_008340.1 PFAM: nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: mca:MCA2059 nitrite/sulfite reductase; nitrite/sulfite reductase hemoprotein subunit beta 1468569 4269186 Mlg_1264 Alkalilimnicola ehrlichii MLHE-1 nitrite/sulfite reductase hemoprotein subunit beta YP_742103.1 1466914 D 187272 CDS YP_742104.1 114320421 4269187 1468556..1469005 1 NC_008340.1 PFAM: Uncharacterised conserved protein UCP030820; KEGG: eba:ebA2621 hypothetical protein; hypothetical protein 1469005 4269187 Mlg_1265 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742104.1 1468556 D 187272 CDS YP_742105.1 114320422 4269188 1469238..1469612 1 NC_008340.1 PFAM: cytochrome c, class I; KEGG: reu:Reut_A3262 cytochrome c, class I; cytochrome c, class I 1469612 4269188 Mlg_1266 Alkalilimnicola ehrlichii MLHE-1 cytochrome c, class I YP_742105.1 1469238 D 187272 CDS YP_742106.1 114320423 4268930 1469661..1470974 1 NC_008340.1 TIGRFAM: Twin-arginine translocation pathway signal; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mag:amb2173 uncharacterized NAD(FAD)-dependent dehydrogenase; sulfide dehydrogenase (flavocytochrome), flavoprotein subunit 1470974 4268930 Mlg_1267 Alkalilimnicola ehrlichii MLHE-1 sulfide dehydrogenase (flavocytochrome), flavoprotein subunit YP_742106.1 1469661 D 187272 CDS YP_742107.1 114320424 4268931 1471008..1472114 1 NC_008340.1 PFAM: protein of unknown function DUF395, YeeE/YedE; KEGG: bja:blr2899 hypothetical protein; hypothetical protein 1472114 4268931 Mlg_1268 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742107.1 1471008 D 187272 CDS YP_742108.1 114320425 4268932 1472201..1473043 1 NC_008340.1 TIGRFAM: Twin-arginine translocation pathway signal; KEGG: rpa:RPA1367 sulfur oxidation protein SoxY; hypothetical protein 1473043 4268932 Mlg_1269 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742108.1 1472201 D 187272 CDS YP_742109.1 114320426 4268933 complement(1473165..1474016) 1 NC_008340.1 KEGG: mag:amb4323 predicted integral membrane protein; hypothetical protein 1474016 4268933 Mlg_1270 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742109.1 1473165 R 187272 CDS YP_742110.1 114320427 4268934 complement(1474152..1474817) 1 NC_008340.1 KEGG: mfa:Mfla_0519 integral membrane protein; integral membrane protein 1474817 4268934 Mlg_1271 Alkalilimnicola ehrlichii MLHE-1 integral membrane protein YP_742110.1 1474152 R 187272 CDS YP_742111.1 114320428 4268935 complement(1474855..1475628) 1 NC_008340.1 hypothetical protein 1475628 4268935 Mlg_1272 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742111.1 1474855 R 187272 CDS YP_742112.1 114320429 4268936 1475768..1477066 1 NC_008340.1 PFAM: nucleoside recognition domain protein; KEGG: mag:amb1309 uncharacterized membrane protein; nucleoside recognition domain-containing protein 1477066 4268936 Mlg_1273 Alkalilimnicola ehrlichii MLHE-1 nucleoside recognition domain-containing protein YP_742112.1 1475768 D 187272 CDS YP_742113.1 114320430 4268937 complement(1477051..1478430) 1 NC_008340.1 KEGG: csa:Csal_3028 hypothetical protein; hypothetical protein 1478430 4268937 Mlg_1274 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742113.1 1477051 R 187272 CDS YP_742114.1 114320431 4268938 1478581..1479552 1 NC_008340.1 PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: ppr:PBPRB1236 hypothetical protein; C4-dicarboxylate transporter/malic acid transport protein 1479552 4268938 Mlg_1275 Alkalilimnicola ehrlichii MLHE-1 C4-dicarboxylate transporter/malic acid transport protein YP_742114.1 1478581 D 187272 CDS YP_742115.1 114320432 4268939 complement(1479586..1480551) 1 NC_008340.1 PFAM: Glutathione S-transferase, C-terminal domain; KEGG: mlo:mll2799 glutathione S-transferase; glutathione S-transferase-like protein 1480551 4268939 Mlg_1276 Alkalilimnicola ehrlichii MLHE-1 glutathione S-transferase-like protein YP_742115.1 1479586 R 187272 CDS YP_742116.1 114320433 4268940 complement(1480578..1481177) 1 NC_008340.1 TIGRFAM: flavoprotein WrbA; PFAM: NADPH-dependent FMN reductase; flavodoxin/nitric oxide synthase; KEGG: tcx:Tcr_1010 flavoprotein WrbA; flavoprotein WrbA 1481177 4268940 Mlg_1277 Alkalilimnicola ehrlichii MLHE-1 flavoprotein WrbA YP_742116.1 1480578 R 187272 CDS YP_742117.1 114320434 4268941 complement(1481250..1482512) 1 NC_008340.1 TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; MoeA domain protein, domain I and II; MoeA domain protein, domain IV; KEGG: eba:ebA1078 probable molybdopterin biosynthesis MOEA protein; molybdopterin molybdochelatase 1482512 4268941 Mlg_1278 Alkalilimnicola ehrlichii MLHE-1 molybdopterin molybdochelatase YP_742117.1 1481250 R 187272 CDS YP_742118.1 114320435 4268942 1482560..1482772 1 NC_008340.1 KEGG: sme:SMa1515 hypothetical protein; hypothetical protein 1482772 4268942 Mlg_1279 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742118.1 1482560 D 187272 CDS YP_742119.1 114320436 4268943 complement(1482813..1483811) 1 NC_008340.1 together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 1483811 moaA 4268943 moaA Alkalilimnicola ehrlichii MLHE-1 molybdenum cofactor biosynthesis protein A YP_742119.1 1482813 R 187272 CDS YP_742120.1 114320437 4268944 1484060..1484602 1 NC_008340.1 KEGG: eba:ebA2942 hypothetical protein; hypothetical protein 1484602 4268944 Mlg_1281 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742120.1 1484060 D 187272 CDS YP_742121.1 114320438 4268945 1484638..1485303 1 NC_008340.1 KEGG: rso:RSc2377 proline rich protein; hypothetical protein 1485303 4268945 Mlg_1282 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742121.1 1484638 D 187272 CDS YP_742122.1 114320439 4268946 1485425..1487125 1 NC_008340.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: son:SO4506 iron-sulfur cluster-binding protein; 4Fe-4S ferredoxin 1487125 4268946 Mlg_1283 Alkalilimnicola ehrlichii MLHE-1 4Fe-4S ferredoxin YP_742122.1 1485425 D 187272 CDS YP_742123.1 114320440 4269050 1487122..1487745 1 NC_008340.1 PFAM: cytoplasmic chaperone TorD family protein; KEGG: nha:Nham_3124 cytoplasmic chaperone TorD; cytoplasmic chaperone TorD family protein 1487745 4269050 Mlg_1284 Alkalilimnicola ehrlichii MLHE-1 cytoplasmic chaperone TorD family protein YP_742123.1 1487122 D 187272 CDS YP_742124.1 114320441 4269051 1487810..1488028 1 NC_008340.1 TIGRFAM: Twin-arginine translocation pathway signal; hypothetical protein 1488028 4269051 Mlg_1285 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742124.1 1487810 D 187272 CDS YP_742125.1 114320442 4269052 1488097..1490985 1 NC_008340.1 TIGRFAM: Twin-arginine translocation pathway signal; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: vpa:VP1513 formate dehydrogenase large subunit; formate dehydrogenase alpha subunit 1490985 4269052 Mlg_1286 Alkalilimnicola ehrlichii MLHE-1 formate dehydrogenase alpha subunit YP_742125.1 1488097 D 187272 CDS YP_742126.1 114320443 4269053 1491016..1491606 1 NC_008340.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: rfr:Rfer_3260 4Fe-4S ferredoxin, iron-sulfur binding; 4Fe-4S ferredoxin 1491606 4269053 Mlg_1287 Alkalilimnicola ehrlichii MLHE-1 4Fe-4S ferredoxin YP_742126.1 1491016 D 187272 CDS YP_742127.1 114320444 4269054 1491612..1491839 1 NC_008340.1 hypothetical protein 1491839 4269054 Mlg_1288 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742127.1 1491612 D 187272 CDS YP_742128.1 114320445 4269055 1491857..1492969 1 NC_008340.1 TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: csa:Csal_1917 formate dehydrogenase, gamma subunit; formate dehydrogenase gamma subunit 1492969 4269055 Mlg_1289 Alkalilimnicola ehrlichii MLHE-1 formate dehydrogenase gamma subunit YP_742128.1 1491857 D 187272 CDS YP_742129.1 114320446 4269056 1493091..1493591 1 NC_008340.1 KEGG: nha:Nham_3120 hypothetical protein; hypothetical protein 1493591 4269056 Mlg_1290 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742129.1 1493091 D 187272 CDS YP_742130.1 114320447 4269057 1493904..1494185 1 NC_008340.1 hypothetical protein 1494185 4269057 Mlg_1291 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742130.1 1493904 D 187272 CDS YP_742131.1 114320448 4269058 1494182..1494634 1 NC_008340.1 KEGG: bha:BH1312 hypothetical protein; hypothetical protein 1494634 4269058 Mlg_1292 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742131.1 1494182 D 187272 CDS YP_742132.1 114320449 4269059 1494709..1495131 1 NC_008340.1 PFAM: protein of unknown function UPF0047; KEGG: noc:Noc_1691 hypothetical protein; hypothetical protein 1495131 4269059 Mlg_1293 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742132.1 1494709 D 187272 CDS YP_742133.1 114320450 4269061 complement(1495363..1495668) 1 NC_008340.1 hypothetical protein 1495668 4269061 Mlg_1294 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742133.1 1495363 R 187272 CDS YP_742134.1 114320451 4269062 complement(1495661..1495933) 1 NC_008340.1 PFAM: thiamineS protein; KEGG: rfr:Rfer_2848 thiamineS; sulfur transfer protein ThiS 1495933 4269062 Mlg_1295 Alkalilimnicola ehrlichii MLHE-1 sulfur transfer protein ThiS YP_742134.1 1495661 R 187272 CDS YP_742135.1 114320452 4269063 complement(1495930..1497207) 1 NC_008340.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: eba:ebA5007 hypothetical protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1497207 4269063 Mlg_1296 Alkalilimnicola ehrlichii MLHE-1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_742135.1 1495930 R 187272 CDS YP_742136.1 114320453 4269064 complement(1497224..1499074) 1 NC_008340.1 PFAM: aldehyde ferredoxin oxidoreductase; KEGG: mag:amb2922 Tungsten-containing aldehyde ferredoxin oxidoreductase; aldehyde ferredoxin oxidoreductase 1499074 4269064 Mlg_1297 Alkalilimnicola ehrlichii MLHE-1 aldehyde ferredoxin oxidoreductase YP_742136.1 1497224 R 187272 CDS YP_742137.1 114320454 4269065 complement(1499076..1499612) 1 NC_008340.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: eba:ebA5004 iron-sulfur cluster-binding protein; potential subunit of aldehyde oxidoreductase; 4Fe-4S ferredoxin 1499612 4269065 Mlg_1298 Alkalilimnicola ehrlichii MLHE-1 4Fe-4S ferredoxin YP_742137.1 1499076 R 187272 CDS YP_742138.1 114320455 4269066 1499890..1500447 1 NC_008340.1 PFAM: GTP cyclohydrolase I; KEGG: psp:PSPPH_1071 GTP cyclohydrolase I; GTP cyclohydrolase 1500447 4269066 Mlg_1299 Alkalilimnicola ehrlichii MLHE-1 GTP cyclohydrolase YP_742138.1 1499890 D 187272 CDS YP_742139.1 114320456 4268637 1500471..1500860 1 NC_008340.1 catalyzes the formation of dihydromonapterin triphosphate from dihydroneopterin triphosphate; D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase 1500860 folX 4268637 folX Alkalilimnicola ehrlichii MLHE-1 D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase YP_742139.1 1500471 D 187272 CDS YP_742140.1 114320457 4268638 complement(1500873..1502558) 1 NC_008340.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; Diverse 7TM receptor, transmembrane region; KEGG: hch:HCH_00660 response regulator containing a CheY-like receiver domain and a GGDEF domain; diguanylate cyclase 1502558 4268638 Mlg_1301 Alkalilimnicola ehrlichii MLHE-1 diguanylate cyclase YP_742140.1 1500873 R 187272 CDS YP_742141.1 114320458 4268639 1502700..1504115 1 NC_008340.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 1504115 gltX 4268639 gltX Alkalilimnicola ehrlichii MLHE-1 glutamyl-tRNA synthetase YP_742141.1 1502700 D 187272 CDS YP_742142.1 114320459 4268642 complement(1504534..1504875) 1 NC_008340.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: mag:amb3359 uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit; alkylhydroperoxidase 1504875 4268642 Mlg_1303 Alkalilimnicola ehrlichii MLHE-1 alkylhydroperoxidase YP_742142.1 1504534 R 187272 CDS YP_742143.1 114320460 4268643 complement(1504881..1505513) 1 NC_008340.1 TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: bxe:Bxe_A1060 molybdopterin-guanine dinucleotide biosynthesis protein A; molybdenum cofactor guanylyltransferase 1505513 4268643 Mlg_1304 Alkalilimnicola ehrlichii MLHE-1 molybdenum cofactor guanylyltransferase YP_742143.1 1504881 R 187272 CDS YP_742144.1 114320461 4268644 complement(1505557..1506321) 1 NC_008340.1 KEGG: nph:NP4954A anaerobic dehydrogenase cluster protein; anaerobic dehydrogenase cluster protein 1506321 4268644 Mlg_1305 Alkalilimnicola ehrlichii MLHE-1 anaerobic dehydrogenase cluster protein YP_742144.1 1505557 R 187272 CDS YP_742145.1 114320462 4268645 1506655..1506984 1 NC_008340.1 PFAM: regulatory protein, ArsR; KEGG: sil:SPOA0427 transcriptional regulator, ArsR family; ArsR family transcriptional regulator 1506984 4268645 Mlg_1306 Alkalilimnicola ehrlichii MLHE-1 ArsR family transcriptional regulator YP_742145.1 1506655 D 187272 CDS YP_742146.1 114320463 4268646 1507162..1508922 1 NC_008340.1 TIGRFAM: sulfate transporter; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; sulphate transporter; KEGG: sil:SPO1956 sulfate permease; sulfate transporter 1508922 4268646 Mlg_1307 Alkalilimnicola ehrlichii MLHE-1 sulfate transporter YP_742146.1 1507162 D 187272 CDS YP_742147.1 114320464 4268647 complement(1508933..1509487) 1 NC_008340.1 KEGG: sru:SRU_1074 methionine-S-sulfoxide reductase; TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; peptide methionine sulfoxide reductase 1509487 4268647 Mlg_1308 Alkalilimnicola ehrlichii MLHE-1 peptide methionine sulfoxide reductase YP_742147.1 1508933 R 187272 CDS YP_742148.1 114320465 4268648 complement(1509484..1510467) 1 NC_008340.1 PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: noc:Noc_0537 sigma-54 specific transcriptional regulator, fis-type; Fis family transcriptional regulator 1510467 4268648 Mlg_1309 Alkalilimnicola ehrlichii MLHE-1 Fis family transcriptional regulator YP_742148.1 1509484 R 187272 CDS YP_742149.1 114320466 4268649 complement(1510488..1511195) 1 NC_008340.1 KEGG: noc:Noc_0538 hypothetical protein; hypothetical protein 1511195 4268649 Mlg_1310 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742149.1 1510488 R 187272 CDS YP_742150.1 114320467 4268650 1511312..1512043 1 NC_008340.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gsu:GSU2188 ABC transporter, ATP-binding protein; ABC transporter-like protein 1512043 4268650 Mlg_1311 Alkalilimnicola ehrlichii MLHE-1 ABC transporter-like protein YP_742150.1 1511312 D 187272 CDS YP_742151.1 114320468 4268651 1512043..1514574 1 NC_008340.1 PFAM: protein of unknown function DUF214; KEGG: gsu:GSU2187 ABC transporter, permease; hypothetical protein 1514574 4268651 Mlg_1312 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742151.1 1512043 D 187272 CDS YP_742152.1 114320469 4268652 1514571..1515716 1 NC_008340.1 KEGG: sru:SRU_1328 hypothetical protein; hypothetical protein 1515716 4268652 Mlg_1313 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742152.1 1514571 D 187272 CDS YP_742153.1 114320470 4268653 1515713..1516684 1 NC_008340.1 PFAM: UspA domain protein; KEGG: nmu:Nmul_A0991 UspA; UspA domain-containing protein 1516684 4268653 Mlg_1314 Alkalilimnicola ehrlichii MLHE-1 UspA domain-containing protein YP_742153.1 1515713 D 187272 CDS YP_742154.1 114320471 4268654 complement(1516722..1518209) 1 NC_008340.1 TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase, FGGY; KEGG: gsu:GSU2762 glycerol kinase; glycerol kinase 1518209 4268654 Mlg_1315 Alkalilimnicola ehrlichii MLHE-1 glycerol kinase YP_742154.1 1516722 R 187272 CDS YP_742155.1 114320472 4268655 complement(1518337..1520229) 1 NC_008340.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 1520229 4268655 Mlg_1316 Alkalilimnicola ehrlichii MLHE-1 thiamine biosynthesis protein ThiC YP_742155.1 1518337 R 187272 CDS YP_742156.1 114320473 4268656 1520604..1522205 1 NC_008340.1 PFAM: Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; KEGG: gvi:gll2743 hypothetical protein; TPR repeat-containing protein 1522205 4268656 Mlg_1317 Alkalilimnicola ehrlichii MLHE-1 TPR repeat-containing protein YP_742156.1 1520604 D 187272 CDS YP_742157.1 114320474 4268657 complement(1522253..1523080) 1 NC_008340.1 PFAM: regulatory proteins, IclR; KEGG: csa:Csal_0066 transcriptional regulator, IclR family; IclR family transcriptional regulator 1523080 4268657 Mlg_1318 Alkalilimnicola ehrlichii MLHE-1 IclR family transcriptional regulator YP_742157.1 1522253 R 187272 CDS YP_742158.1 114320475 4268658 1523155..1524423 1 NC_008340.1 PFAM: MOFRL domain protein; KEGG: eba:ebA4615 hydroxypyruvate reductase; hydroxypyruvate reductase 1524423 4268658 Mlg_1319 Alkalilimnicola ehrlichii MLHE-1 hydroxypyruvate reductase YP_742158.1 1523155 D 187272 CDS YP_742159.1 114320476 4268659 1524464..1524805 1 NC_008340.1 PFAM: transcriptional coactivator/pterin dehydratase; KEGG: mca:MCA0497 pterin-4-alpha-carbinolamine dehydratase; pterin-4-alpha-carbinolamine dehydratase 1524805 4268659 Mlg_1320 Alkalilimnicola ehrlichii MLHE-1 pterin-4-alpha-carbinolamine dehydratase YP_742159.1 1524464 D 187272 CDS YP_742160.1 114320477 4268660 complement(1524851..1525348) 1 NC_008340.1 TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; KEGG: mfa:Mfla_0199 molybdenum cofactor biosynthesis protein C; GTP cyclohydrolase subunit MoaC 1525348 4268660 Mlg_1321 Alkalilimnicola ehrlichii MLHE-1 GTP cyclohydrolase subunit MoaC YP_742160.1 1524851 R 187272 CDS YP_742161.1 114320478 4268661 complement(1525540..1526259) 1 NC_008340.1 PFAM: short-chain dehydrogenase/reductase SDR; glucose/ribitol dehydrogenase; KEGG: gvi:glr0293 probable carbonyl reductase; short-chain dehydrogenase/reductase SDR 1526259 4268661 Mlg_1322 Alkalilimnicola ehrlichii MLHE-1 short-chain dehydrogenase/reductase SDR YP_742161.1 1525540 R 187272 CDS YP_742162.1 114320479 4268662 complement(1526351..1527049) 1 NC_008340.1 2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase 1527049 gpmA 4268662 gpmA Alkalilimnicola ehrlichii MLHE-1 phosphoglyceromutase YP_742162.1 1526351 R 187272 CDS YP_742163.1 114320480 4268663 complement(1527188..1527640) 1 NC_008340.1 TIGRFAM: thioesterase domain, KEGG: cte:CT0459 hypothetical protein; thioesterase 1527640 4268663 Mlg_1324 Alkalilimnicola ehrlichii MLHE-1 thioesterase YP_742163.1 1527188 R 187272 CDS YP_742164.1 114320481 4268664 1527742..1528212 1 NC_008340.1 PFAM: adenylate cyclase; KEGG: mca:MCA2454 hypothetical protein; adenylate cyclase 1528212 4268664 Mlg_1325 Alkalilimnicola ehrlichii MLHE-1 adenylate cyclase YP_742164.1 1527742 D 187272 CDS YP_742165.1 114320482 4268665 1528216..1528749 1 NC_008340.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: csa:Csal_2068 ErfK/YbiS/YcfS/YnhG; ErfK/YbiS/YcfS/YnhG family protein 1528749 4268665 Mlg_1326 Alkalilimnicola ehrlichii MLHE-1 ErfK/YbiS/YcfS/YnhG family protein YP_742165.1 1528216 D 187272 CDS YP_742166.1 114320483 4268666 1528749..1529795 1 NC_008340.1 PFAM: glycoside hydrolase, family 3 domain protein; KEGG: noc:Noc_2183 glycoside hydrolase, family 3-like; beta-N-acetylhexosaminidase 1529795 4268666 Mlg_1327 Alkalilimnicola ehrlichii MLHE-1 beta-N-acetylhexosaminidase YP_742166.1 1528749 D 187272 CDS YP_742167.1 114320484 4268667 1529825..1530421 1 NC_008340.1 PFAM: phosphoribosyltransferase; KEGG: eba:ebA3304 hypoxanthine phosphoribosyltransferase; phosphoribosyltransferase 1530421 4268667 Mlg_1328 Alkalilimnicola ehrlichii MLHE-1 phosphoribosyltransferase YP_742167.1 1529825 D 187272 CDS YP_742168.1 114320485 4268668 1530418..1531155 1 NC_008340.1 PFAM: purine phosphorylase, family 2; KEGG: noc:Noc_0457 5'-methylthioadenosine phosphorylase; methylthioadenosine phosphorylase 1531155 4268668 Mlg_1329 Alkalilimnicola ehrlichii MLHE-1 methylthioadenosine phosphorylase YP_742168.1 1530418 D 187272 CDS YP_742169.1 114320486 4268669 complement(1531160..1532146) 1 NC_008340.1 PFAM: glycine cleavage T protein (aminomethyl transferase); KEGG: nmu:Nmul_A1737 glycine cleavage T protein (aminomethyl transferase); glycine cleavage T protein (aminomethyl transferase) 1532146 4268669 Mlg_1330 Alkalilimnicola ehrlichii MLHE-1 glycine cleavage T protein (aminomethyl transferase) YP_742169.1 1531160 R 187272 CDS YP_742170.1 114320487 4270004 1532224..1532403 1 NC_008340.1 PFAM: protein of unknown function DUF1674; KEGG: rru:Rru_A3578 hypothetical protein; hypothetical protein 1532403 4270004 Mlg_1331 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742170.1 1532224 D 187272 CDS YP_742171.1 114320488 4270005 1532590..1532982 1 NC_008340.1 PFAM: succinate dehydrogenase, cytochrome b subunit; KEGG: mag:amb3950 succinate dehydrogenase/fumarate reductase, cytochrome b subunit; succinate dehydrogenase subunit C 1532982 4270005 Mlg_1332 Alkalilimnicola ehrlichii MLHE-1 succinate dehydrogenase subunit C YP_742171.1 1532590 D 187272 CDS YP_742172.1 114320489 4270006 1532982..1533362 1 NC_008340.1 PFAM: succinate dehydrogenase, cytochrome b subunit; KEGG: mca:MCA1549 succinate dehydrogenase, hydrophobic membrane anchor protein; succinate dehydrogenase subunit D 1533362 4270006 Mlg_1333 Alkalilimnicola ehrlichii MLHE-1 succinate dehydrogenase subunit D YP_742172.1 1532982 D 187272 CDS YP_742173.1 114320490 4270007 1533367..1535157 1 NC_008340.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 1535157 sdhA 4270007 sdhA Alkalilimnicola ehrlichii MLHE-1 succinate dehydrogenase flavoprotein subunit YP_742173.1 1533367 D 187272 CDS YP_742174.1 114320491 4270008 1535176..1535952 1 NC_008340.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit 1535952 sdhB 4270008 sdhB Alkalilimnicola ehrlichii MLHE-1 succinate dehydrogenase iron-sulfur subunit YP_742174.1 1535176 D 187272 CDS YP_742175.1 114320492 4270009 1535970..1536200 1 NC_008340.1 PFAM: protein of unknown function DUF339; KEGG: xac:XAC2079 hypothetical protein; hypothetical protein 1536200 4270009 Mlg_1336 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742175.1 1535970 D 187272 CDS YP_742176.1 114320493 4270010 1536256..1536675 1 NC_008340.1 hypothetical protein 1536675 4270010 Mlg_1337 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742176.1 1536256 D 187272 CDS YP_742177.1 114320494 4270011 complement(1536656..1538290) 1 NC_008340.1 catalyzes the formation of oxaloacetate from L-aspartate; L-aspartate oxidase 1538290 4270011 Mlg_1338 Alkalilimnicola ehrlichii MLHE-1 L-aspartate oxidase YP_742177.1 1536656 R 187272 CDS YP_742178.1 114320495 4270012 1538574..1539149 1 NC_008340.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; RNA polymerase sigma factor RpoE 1539149 4270012 Mlg_1339 Alkalilimnicola ehrlichii MLHE-1 RNA polymerase sigma factor RpoE YP_742178.1 1538574 D 187272 CDS YP_742179.1 114320496 4270013 1539168..1539899 1 NC_008340.1 PFAM: Anti sigma-E protein RseA family protein; KEGG: xcv:XCV1371 negative regulator of sigma E activity; anti sigma-E protein, RseA 1539899 4270013 Mlg_1340 Alkalilimnicola ehrlichii MLHE-1 anti sigma-E protein, RseA YP_742179.1 1539168 D 187272 CDS YP_742180.1 114320497 4270014 1539880..1540899 1 NC_008340.1 PFAM: MucB/RseB family protein; KEGG: noc:Noc_2464 MucB/RseB; sigma E regulatory protein, MucB/RseB 1540899 4270014 Mlg_1341 Alkalilimnicola ehrlichii MLHE-1 sigma E regulatory protein, MucB/RseB YP_742180.1 1539880 D 187272 CDS YP_742181.1 114320498 4270015 1540896..1541339 1 NC_008340.1 PFAM: Positive regulator of sigma(E), RseC/MucC; KEGG: mca:MCA1468 sigma factor regulator MucC; positive regulator of sigma E, RseC/MucC 1541339 4270015 Mlg_1342 Alkalilimnicola ehrlichii MLHE-1 positive regulator of sigma E, RseC/MucC YP_742181.1 1540896 D 187272 CDS YP_742182.1 114320499 4270016 1541412..1542857 1 NC_008340.1 TIGRFAM: protease Do; PFAM: peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: mca:MCA1467 serine protease, MucD; protease Do 1542857 4270016 Mlg_1343 Alkalilimnicola ehrlichii MLHE-1 protease Do YP_742182.1 1541412 D 187272 CDS YP_742183.1 114320500 4270017 1542897..1544780 1 NC_008340.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 1544780 4270017 Mlg_1344 Alkalilimnicola ehrlichii MLHE-1 GTP-binding protein LepA YP_742183.1 1542897 D 187272 CDS YP_742184.1 114320501 4270018 1544792..1545565 1 NC_008340.1 KEGG: mca:MCA1465 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24, S26A and S26B; signal peptidase I 1545565 4270018 Mlg_1345 Alkalilimnicola ehrlichii MLHE-1 signal peptidase I YP_742184.1 1544792 D 187272 CDS YP_742185.1 114320502 4270019 1545606..1545986 1 NC_008340.1 KEGG: xoo:XOO1854 hypothetical protein; hypothetical protein 1545986 4270019 Mlg_1346 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742185.1 1545606 D 187272 CDS YP_742186.1 114320503 4270020 1545986..1546672 1 NC_008340.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 1546672 rnc 4270020 rnc Alkalilimnicola ehrlichii MLHE-1 ribonuclease III YP_742186.1 1545986 D 187272 CDS YP_742187.1 114320504 4268602 1546662..1547609 1 NC_008340.1 TIGRFAM: small GTP-binding protein; GTP-binding; GTP-binding protein Era; PFAM: GTP-binding protein, HSR1-related; KH, type 2 domain protein; KEGG: pae:PA0771 GTP-binding protein Era; GTP-binding protein Era 1547609 4268602 Mlg_1348 Alkalilimnicola ehrlichii MLHE-1 GTP-binding protein Era YP_742187.1 1546662 D 187272 CDS YP_742188.1 114320505 4268603 1547614..1548357 1 NC_008340.1 TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O, RecO; KEGG: noc:Noc_0794 recombination protein O, RecO; DNA repair protein RecO 1548357 4268603 Mlg_1349 Alkalilimnicola ehrlichii MLHE-1 DNA repair protein RecO YP_742188.1 1547614 D 187272 CDS YP_742189.1 114320506 4268604 1548347..1549132 1 NC_008340.1 involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 1549132 4268604 Mlg_1350 Alkalilimnicola ehrlichii MLHE-1 pyridoxine 5'-phosphate synthase YP_742189.1 1548347 D 187272 CDS YP_742190.1 114320507 4268605 1549129..1549515 1 NC_008340.1 KEGG: vch:VC2457 holo-(acyl-carrier-protein) synthase; TIGRFAM: holo-acyl-carrier-protein synthase; Phosphopantethiene-protein transferase; PFAM: 4'-phosphopantetheinyl transferase; holo-ACP synthase 1549515 4268605 Mlg_1351 Alkalilimnicola ehrlichii MLHE-1 holo-ACP synthase YP_742190.1 1549129 D 187272 CDS YP_742191.1 114320508 4268606 1549552..1550445 1 NC_008340.1 catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; cysteine synthase B 1550445 cysM 4268606 cysM Alkalilimnicola ehrlichii MLHE-1 cysteine synthase B YP_742191.1 1549552 D 187272 CDS YP_742192.1 114320509 4268607 1550448..1551239 1 NC_008340.1 KEGG: noc:Noc_0800 hypothetical protein; hypothetical protein 1551239 4268607 Mlg_1353 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742192.1 1550448 D 187272 CDS YP_742193.1 114320510 4268608 1551229..1552566 1 NC_008340.1 in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S]; 23S rRNA 5-methyluridine methyltransferase 1552566 rumA 4268608 rumA Alkalilimnicola ehrlichii MLHE-1 23S rRNA 5-methyluridine methyltransferase YP_742193.1 1551229 D 187272 CDS YP_742194.1 114320511 4268609 1552568..1553173 1 NC_008340.1 TIGRFAM: Nucleoside diphosphate pyrophosphatase; PFAM: NUDIX hydrolase; KEGG: neu:NE2470 ADP-ribose pyrophosphatase; nucleoside diphosphate pyrophosphatase 1553173 4268609 Mlg_1355 Alkalilimnicola ehrlichii MLHE-1 nucleoside diphosphate pyrophosphatase YP_742194.1 1552568 D 187272 CDS YP_742195.1 114320512 4268610 complement(1553191..1553982) 1 NC_008340.1 KEGG: dar:Daro_2854 hypothetical protein; hypothetical protein 1553982 4268610 Mlg_1356 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742195.1 1553191 R 187272 CDS YP_742196.1 114320513 4268611 complement(1553979..1554476) 1 NC_008340.1 KEGG: pae:PA2632 hypothetical protein; hypothetical protein 1554476 4268611 Mlg_1357 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742196.1 1553979 R 187272 CDS YP_742197.1 114320514 4268612 complement(1554508..1555875) 1 NC_008340.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 1555875 4268612 Mlg_1358 Alkalilimnicola ehrlichii MLHE-1 adenylosuccinate lyase YP_742197.1 1554508 R 187272 CDS YP_742198.1 114320515 4268613 1556042..1557430 1 NC_008340.1 PFAM: fumarate lyase; KEGG: mca:MCA1543 fumarate hydratase; fumarase 1557430 4268613 Mlg_1359 Alkalilimnicola ehrlichii MLHE-1 fumarase YP_742198.1 1556042 D 187272 CDS YP_742199.1 114320516 4268614 complement(1557405..1558262) 1 NC_008340.1 KEGG: noc:Noc_2131 pyrimidine reductase, riboflavin biosynthesis, RibD; pyrimidine reductase, riboflavin biosynthesis, RibD 1558262 4268614 Mlg_1360 Alkalilimnicola ehrlichii MLHE-1 pyrimidine reductase, riboflavin biosynthesis, RibD YP_742199.1 1557405 R 187272 CDS YP_742200.1 114320517 4268615 1558379..1559023 1 NC_008340.1 PFAM: Uracil-DNA glycosylase superfamily; KEGG: tbd:Tbd_0703 hypothetical protein; uracil-DNA glycosylase 1559023 4268615 Mlg_1361 Alkalilimnicola ehrlichii MLHE-1 uracil-DNA glycosylase YP_742200.1 1558379 D 187272 CDS YP_742201.1 114320518 4268616 1559020..1560855 1 NC_008340.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 1560855 uvrC 4268616 uvrC Alkalilimnicola ehrlichii MLHE-1 excinuclease ABC subunit C YP_742201.1 1559020 D 187272 CDS YP_742202.1 114320519 4268617 1560859..1561410 1 NC_008340.1 KEGG: noc:Noc_1643 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1561410 4268617 Mlg_1363 Alkalilimnicola ehrlichii MLHE-1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_742202.1 1560859 D 187272 CDS YP_742203.1 114320520 4268127 complement(1561990..1562670) 1 NC_008340.1 KEGG: noc:Noc_1912 phospholipase D/transphosphatidylase; phospholipase D/transphosphatidylase 1562670 4268127 Mlg_1364 Alkalilimnicola ehrlichii MLHE-1 phospholipase D/transphosphatidylase YP_742203.1 1561990 R 187272 CDS YP_742204.1 114320521 4268128 complement(1562657..1563265) 1 NC_008340.1 KEGG: rba:RB13120 hypothetical protein- transmembrane protein; transmembrane protein 1563265 4268128 Mlg_1365 Alkalilimnicola ehrlichii MLHE-1 transmembrane protein YP_742204.1 1562657 R 187272 CDS YP_742205.1 114320522 4268129 1563460..1564089 1 NC_008340.1 PFAM: multiple antibiotic resistance (MarC)-related proteins; KEGG: dge:Dgeo_2143 multiple antibiotic resistance (MarC)-related proteins; multiple antibiotic resistance (MarC)-like protein 1564089 4268129 Mlg_1366 Alkalilimnicola ehrlichii MLHE-1 multiple antibiotic resistance (MarC)-like protein YP_742205.1 1563460 D 187272 CDS YP_742206.1 114320523 4268130 complement(1564049..1564951) 1 NC_008340.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; glucose/ribitol dehydrogenase; KEGG: mca:MCA2186 oxidoreductase, short-chain dehydrogenase/reductase; short-chain dehydrogenase/reductase SDR 1564951 4268130 Mlg_1367 Alkalilimnicola ehrlichii MLHE-1 short-chain dehydrogenase/reductase SDR YP_742206.1 1564049 R 187272 CDS YP_742207.1 114320524 4268131 complement(1564990..1566177) 1 NC_008340.1 PFAM: CBS domain containing protein; peptidase M50; KEGG: det:DET0769 protease; peptidase M50 1566177 4268131 Mlg_1368 Alkalilimnicola ehrlichii MLHE-1 peptidase M50 YP_742207.1 1564990 R 187272 CDS YP_742208.1 114320525 4268132 1566235..1567143 1 NC_008340.1 KEGG: tdn:Tmden_0645 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase 1567143 4268132 Mlg_1369 Alkalilimnicola ehrlichii MLHE-1 PAS/PAC sensor-containing diguanylate cyclase YP_742208.1 1566235 D 187272 CDS YP_742209.1 114320526 4268133 1567153..1568949 1 NC_008340.1 KEGG: pae:PA1113 probable ATP-binding/permease fusion ABC transporter; TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; lipid ABC transporter ATPase/inner membrane protein 1568949 4268133 Mlg_1370 Alkalilimnicola ehrlichii MLHE-1 lipid ABC transporter ATPase/inner membrane protein YP_742209.1 1567153 D 187272 CDS YP_742210.1 114320527 4268134 complement(1568957..1571026) 1 NC_008340.1 TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; KEGG: pae:PA5291 probable choline transporter; choline/carnitine/betaine transporter 1571026 4268134 Mlg_1371 Alkalilimnicola ehrlichii MLHE-1 choline/carnitine/betaine transporter YP_742210.1 1568957 R 187272 CDS YP_742211.1 114320528 4268135 complement(1571137..1572573) 1 NC_008340.1 KEGG: mca:MCA0115 oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; oxygen-independent coproporphyrinogen III oxidase 1572573 4268135 Mlg_1372 Alkalilimnicola ehrlichii MLHE-1 oxygen-independent coproporphyrinogen III oxidase YP_742211.1 1571137 R 187272 CDS YP_742212.1 114320529 4268136 complement(1572745..1573962) 1 NC_008340.1 PFAM: beta-ketoacyl synthase; KEGG: pae:PA1609 beta-ketoacyl-ACP synthase I; 3-oxoacyl-ACP synthase 1573962 4268136 Mlg_1373 Alkalilimnicola ehrlichii MLHE-1 3-oxoacyl-ACP synthase YP_742212.1 1572745 R 187272 CDS YP_742213.1 114320530 4268137 complement(1574017..1574547) 1 NC_008340.1 catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP; 3-hydroxydecanoyl-ACP dehydratase 1574547 4268137 Mlg_1374 Alkalilimnicola ehrlichii MLHE-1 3-hydroxydecanoyl-ACP dehydratase YP_742213.1 1574017 R 187272 CDS YP_742214.1 114320531 4268138 complement(1574684..1575190) 1 NC_008340.1 KEGG: csa:Csal_1035 hypothetical protein; hypothetical protein 1575190 4268138 Mlg_1375 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742214.1 1574684 R 187272 CDS YP_742215.1 114320532 4268139 1575404..1576903 1 NC_008340.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: ilo:IL2583 signal transduction histidine kinase, contains HAMP domain; periplasmic sensor signal transduction histidine kinase 1576903 4268139 Mlg_1376 Alkalilimnicola ehrlichii MLHE-1 periplasmic sensor signal transduction histidine kinase YP_742215.1 1575404 D 187272 CDS YP_742216.1 114320533 4269569 1576900..1578321 1 NC_008340.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; KEGG: ilo:IL2582 response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains; Fis family transcriptional regulator 1578321 4269569 Mlg_1377 Alkalilimnicola ehrlichii MLHE-1 Fis family transcriptional regulator YP_742216.1 1576900 D 187272 CDS YP_742217.1 114320534 4269570 1578389..1580374 1 NC_008340.1 PFAM: Lytic transglycosylase, catalytic; KEGG: ilo:IL0012 soluble lytic murein transglycosylase; lytic transglycosylase catalytic subunit 1580374 4269570 Mlg_1378 Alkalilimnicola ehrlichii MLHE-1 lytic transglycosylase catalytic subunit YP_742217.1 1578389 D 187272 CDS YP_742218.1 114320535 4269571 complement(1580416..1580982) 1 NC_008340.1 hypothetical protein 1580982 4269571 Mlg_1379 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742218.1 1580416 R 187272 CDS YP_742219.1 114320536 4269572 complement(1581002..1581616) 1 NC_008340.1 PFAM: protein of unknown function UPF0126; KEGG: son:SO1319 hypothetical protein; hypothetical protein 1581616 4269572 Mlg_1380 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742219.1 1581002 R 187272 CDS YP_742220.1 114320537 4269573 complement(1581642..1583528) 1 NC_008340.1 TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: Transketolase, central region; Transketolase domain protein; KEGG: noc:Noc_1743 1-deoxy-D-xylulose-5-phosphate synthase; 1-deoxy-D-xylulose-5-phosphate synthase 1583528 4269573 Mlg_1381 Alkalilimnicola ehrlichii MLHE-1 1-deoxy-D-xylulose-5-phosphate synthase YP_742220.1 1581642 R 187272 CDS YP_742221.1 114320538 4269574 complement(1583525..1583992) 1 NC_008340.1 PFAM: protein of unknown function UPF0153; KEGG: sil:SPO3155 hypothetical protein; hypothetical protein 1583992 4269574 Mlg_1382 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742221.1 1583525 R 187272 CDS YP_742222.1 114320539 4269575 complement(1584174..1586411) 1 NC_008340.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: bca:BCE3758 heavy metal-transporting ATPase; heavy metal translocating P-type ATPase 1586411 4269575 Mlg_1383 Alkalilimnicola ehrlichii MLHE-1 heavy metal translocating P-type ATPase YP_742222.1 1584174 R 187272 CDS YP_742223.1 114320540 4269576 complement(1586488..1586808) 1 NC_008340.1 KEGG: deh:cbdb_A907 hypothetical protein; hypothetical protein 1586808 4269576 Mlg_1384 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742223.1 1586488 R 187272 CDS YP_742224.1 114320541 4269577 complement(1586835..1587323) 1 NC_008340.1 KEGG: par:Psyc_1585 hypothetical protein; hypothetical protein 1587323 4269577 Mlg_1385 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742224.1 1586835 R 187272 CDS YP_742225.1 114320542 4269578 complement(1587304..1587906) 1 NC_008340.1 KEGG: hch:HCH_03866 hypothetical protein; hypothetical protein 1587906 4269578 Mlg_1386 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742225.1 1587304 R 187272 CDS YP_742226.1 114320543 4269579 1588641..1588994 1 NC_008340.1 hypothetical protein 1588994 4269579 Mlg_1387 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742226.1 1588641 D 187272 CDS YP_742227.1 114320544 4269580 1589156..1590409 1 NC_008340.1 PFAM: outer membrane efflux protein; KEGG: hch:HCH_03018 outer membrane protein; outer membrane efflux protein 1590409 4269580 Mlg_1388 Alkalilimnicola ehrlichii MLHE-1 outer membrane efflux protein YP_742227.1 1589156 D 187272 CDS YP_742228.1 114320545 4269581 1590406..1591914 1 NC_008340.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: sde:Sde_1930 membrane-fusion protein-like; RND family efflux transporter MFP subunit 1591914 4269581 Mlg_1389 Alkalilimnicola ehrlichii MLHE-1 RND family efflux transporter MFP subunit YP_742228.1 1590406 D 187272 CDS YP_742229.1 114320546 4269582 1591926..1595045 1 NC_008340.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: hch:HCH_03020 silver efflux pump; CzcA family heavy metal efflux protein 1595045 4269582 Mlg_1390 Alkalilimnicola ehrlichii MLHE-1 CzcA family heavy metal efflux protein YP_742229.1 1591926 D 187272 CDS YP_742230.1 114320547 4269583 1595091..1595423 1 NC_008340.1 KEGG: ppr:PBPRA1004 cation efflux system transmembrane protein; cation efflux system transmembrane protein 1595423 4269583 Mlg_1391 Alkalilimnicola ehrlichii MLHE-1 cation efflux system transmembrane protein YP_742230.1 1595091 D 187272 CDS YP_742231.1 114320548 4269584 complement(1595499..1596107) 1 NC_008340.1 KEGG: pmt:PMT1841 hypothetical protein; hypothetical protein 1596107 4269584 Mlg_1392 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742231.1 1595499 R 187272 CDS YP_742232.1 114320549 4269585 1596229..1597803 1 NC_008340.1 stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein; peptide chain release factor 3 1597803 prfC 4269585 prfC Alkalilimnicola ehrlichii MLHE-1 peptide chain release factor 3 YP_742232.1 1596229 D 187272 CDS YP_742233.1 114320550 4269586 complement(1597818..1599011) 1 NC_008340.1 TIGRFAM: TraB family protein; PFAM: TraB determinant protein; KEGG: noc:Noc_0536 pheromone shutdown protein; TraB family protein 1599011 4269586 Mlg_1394 Alkalilimnicola ehrlichii MLHE-1 TraB family protein YP_742233.1 1597818 R 187272 CDS YP_742234.1 114320551 4270617 1599151..1599927 1 NC_008340.1 PFAM: protein of unknown function DUF980; KEGG: dar:Daro_2829 protein of unknown function DUF980; hypothetical protein 1599927 4270617 Mlg_1395 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742234.1 1599151 D 187272 CDS YP_742235.1 114320552 4270618 complement(1600034..1601932) 1 NC_008340.1 PFAM: AMP-dependent synthetase and ligase; KEGG: vpa:VP1644 PrpE protein; AMP-dependent synthetase/ligase 1601932 4270618 Mlg_1396 Alkalilimnicola ehrlichii MLHE-1 AMP-dependent synthetase/ligase YP_742235.1 1600034 R 187272 CDS YP_742236.1 114320553 4270619 1602342..1603145 1 NC_008340.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: noc:Noc_0833 flagellar motor protein; MotA/TolQ/ExbB proton channel 1603145 4270619 Mlg_1397 Alkalilimnicola ehrlichii MLHE-1 MotA/TolQ/ExbB proton channel YP_742236.1 1602342 D 187272 CDS YP_742237.1 114320554 4270620 1603151..1603951 1 NC_008340.1 PFAM: OmpA/MotB domain protein; KEGG: noc:Noc_0834 flagellar motor protein; OmpA/MotB domain-containing protein 1603951 4270620 Mlg_1398 Alkalilimnicola ehrlichii MLHE-1 OmpA/MotB domain-containing protein YP_742237.1 1603151 D 187272 CDS YP_742238.1 114320555 4270621 complement(1603920..1604990) 1 NC_008340.1 TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase, DuS; KEGG: cvi:CV0544 regulatory gene required to sense and relay the nitrogen status; nifR3 family TIM-barrel protein 1604990 4270621 Mlg_1399 Alkalilimnicola ehrlichii MLHE-1 nifR3 family TIM-barrel protein YP_742238.1 1603920 R 187272 CDS YP_742239.1 114320556 4270622 1605273..1606232 1 NC_008340.1 Catalyzes the reduction of hydroxypyruvate to form D-glycerate, using NADH as an electron donor; glycerate dehydrogenase 1606232 4270622 Mlg_1400 Alkalilimnicola ehrlichii MLHE-1 glycerate dehydrogenase YP_742239.1 1605273 D 187272 CDS YP_742240.1 114320557 4270623 1606305..1607087 1 NC_008340.1 PFAM: short-chain dehydrogenase/reductase SDR; glucose/ribitol dehydrogenase; KEGG: lpp:lpp0765 hypothetical protein; short-chain dehydrogenase/reductase SDR 1607087 4270623 Mlg_1401 Alkalilimnicola ehrlichii MLHE-1 short-chain dehydrogenase/reductase SDR YP_742240.1 1606305 D 187272 CDS YP_742241.1 114320558 4270624 1607134..1607646 1 NC_008340.1 KEGG: neu:NE1493 cytochrome c, class IC:cytochrome c, class I; hypothetical protein 1607646 4270624 Mlg_1402 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742241.1 1607134 D 187272 CDS YP_742242.1 114320559 4270625 1607646..1608563 1 NC_008340.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: xcb:XC_3738 transcriptional regulator; LysR family transcriptional regulator 1608563 4270625 Mlg_1403 Alkalilimnicola ehrlichii MLHE-1 LysR family transcriptional regulator YP_742242.1 1607646 D 187272 CDS YP_742243.1 114320560 4270626 1608673..1609212 1 NC_008340.1 PFAM: cytochrome B561; KEGG: hch:HCH_01820 cytochrome b561; cytochrome B561 1609212 4270626 Mlg_1404 Alkalilimnicola ehrlichii MLHE-1 cytochrome B561 YP_742243.1 1608673 D 187272 CDS YP_742244.1 114320561 4270627 1609303..1609908 1 NC_008340.1 PFAM: YceI family protein; KEGG: ilo:IL2562 hypothetical protein; YceI family protein 1609908 4270627 Mlg_1405 Alkalilimnicola ehrlichii MLHE-1 YceI family protein YP_742244.1 1609303 D 187272 CDS YP_742245.1 114320562 4270628 1609955..1610542 1 NC_008340.1 PFAM: Tellurite resistance protein TehB; Methyltransferase type 11; Methyltransferase type 12; KEGG: gsu:GSU0570 hypothetical protein; type 11 methyltransferase 1610542 4270628 Mlg_1406 Alkalilimnicola ehrlichii MLHE-1 type 11 methyltransferase YP_742245.1 1609955 D 187272 CDS YP_742246.1 114320563 4270629 complement(1610550..1612016) 1 NC_008340.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: cvi:CV0433 outer membrane efflux protein; RND efflux system outer membrane lipoprotein 1612016 4270629 Mlg_1407 Alkalilimnicola ehrlichii MLHE-1 RND efflux system outer membrane lipoprotein YP_742246.1 1610550 R 187272 CDS YP_742247.1 114320564 4270630 complement(1612009..1615185) 1 NC_008340.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: rpc:RPC_4635 hydrophobe/amphiphile efflux-1 HAE1; hydrophobe/amphiphile efflux-1 (HAE1) family protein 1615185 4270630 Mlg_1408 Alkalilimnicola ehrlichii MLHE-1 hydrophobe/amphiphile efflux-1 (HAE1) family protein YP_742247.1 1612009 R 187272 CDS YP_742248.1 114320565 4270631 complement(1615190..1616347) 1 NC_008340.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: dvu:DVU0060 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 1616347 4270631 Mlg_1409 Alkalilimnicola ehrlichii MLHE-1 RND family efflux transporter MFP subunit YP_742248.1 1615190 R 187272 CDS YP_742249.1 114320566 4270632 1616480..1617166 1 NC_008340.1 PFAM: regulatory protein, TetR; Tetracycline transcriptional repressor MAATS-type, C-terminal domain protein; KEGG: pae:PA3574 probable transcriptional regulator; TetR family transcriptional regulator 1617166 4270632 Mlg_1410 Alkalilimnicola ehrlichii MLHE-1 TetR family transcriptional regulator YP_742249.1 1616480 D 187272 CDS YP_742250.1 114320567 4270633 complement(1617402..1618382) 1 NC_008340.1 PFAM: OmpA/MotB domain protein; KEGG: nwi:Nwi_1814 OmpA/MotB; OmpA/MotB domain-containing protein 1618382 4270633 Mlg_1411 Alkalilimnicola ehrlichii MLHE-1 OmpA/MotB domain-containing protein YP_742250.1 1617402 R 187272 CDS YP_742251.1 114320568 4270410 complement(1618506..1619522) 1 NC_008340.1 PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: gsu:GSU0573 alcohol dehydrogenase, zinc-containing; alcohol dehydrogenase 1619522 4270410 Mlg_1412 Alkalilimnicola ehrlichii MLHE-1 alcohol dehydrogenase YP_742251.1 1618506 R 187272 CDS YP_742252.1 114320569 4270411 1619632..1620777 1 NC_008340.1 PFAM: aminotransferase, class V; KEGG: pae:PA2958 hypothetical protein; class V aminotransferase 1620777 4270411 Mlg_1413 Alkalilimnicola ehrlichii MLHE-1 class V aminotransferase YP_742252.1 1619632 D 187272 CDS YP_742253.1 114320570 4270412 complement(1620804..1621166) 1 NC_008340.1 PFAM: type IV pilus assembly PilZ; KEGG: pfo:Pfl_4150 type IV pilus assembly PilZ; type IV pilus assembly PilZ 1621166 4270412 Mlg_1414 Alkalilimnicola ehrlichii MLHE-1 type IV pilus assembly PilZ YP_742253.1 1620804 R 187272 CDS YP_742254.1 114320571 4270413 complement(1621238..1622251) 1 NC_008340.1 TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: mca:MCA1995 DNA polymerase III, delta prime subunit; DNA polymerase III subunit delta' 1622251 4270413 Mlg_1415 Alkalilimnicola ehrlichii MLHE-1 DNA polymerase III subunit delta' YP_742254.1 1621238 R 187272 CDS YP_742255.1 114320572 4270414 complement(1622251..1622904) 1 NC_008340.1 PFAM: thymidylate kinase; KEGG: pae:PA2962 thymidylate kinase; thymidylate kinase 1622904 4270414 Mlg_1416 Alkalilimnicola ehrlichii MLHE-1 thymidylate kinase YP_742255.1 1622251 R 187272 CDS YP_742256.1 114320573 4270415 complement(1622901..1623917) 1 NC_008340.1 PFAM: aminodeoxychorismate lyase; KEGG: csa:Csal_1605 aminodeoxychorismate lyase; aminodeoxychorismate lyase 1623917 4270415 Mlg_1417 Alkalilimnicola ehrlichii MLHE-1 aminodeoxychorismate lyase YP_742256.1 1622901 R 187272 CDS YP_742257.1 114320574 4270416 complement(1623914..1624771) 1 NC_008340.1 PFAM: aminotransferase, class IV; KEGG: pae:PA2964 4-amino-4-deoxychorismate lyase; aminodeoxychorismate lyase 1624771 4270416 Mlg_1418 Alkalilimnicola ehrlichii MLHE-1 aminodeoxychorismate lyase YP_742257.1 1623914 R 187272 CDS YP_742258.1 114320575 4270417 complement(1624786..1626024) 1 NC_008340.1 PFAM: beta-ketoacyl synthase; KEGG: bte:BTH_I1721 3-oxoacyl-(acyl-carrier-protein) synthase II; 3-oxoacyl-ACP synthase 1626024 4270417 Mlg_1419 Alkalilimnicola ehrlichii MLHE-1 3-oxoacyl-ACP synthase YP_742258.1 1624786 R 187272 CDS YP_742259.1 114320576 4270418 complement(1626146..1626385) 1 NC_008340.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 1626385 acpP 4270418 acpP Alkalilimnicola ehrlichii MLHE-1 acyl carrier protein YP_742259.1 1626146 R 187272 CDS YP_742260.1 114320577 4270419 complement(1626514..1627269) 1 NC_008340.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; KEGG: tcx:Tcr_0712 3-oxoacyl-(acyl-carrier-protein) reductase; 3-oxoacyl-ACP reductase 1627269 4270419 Mlg_1421 Alkalilimnicola ehrlichii MLHE-1 3-oxoacyl-ACP reductase YP_742260.1 1626514 R 187272 CDS YP_742261.1 114320578 4270420 complement(1627291..1628235) 1 NC_008340.1 TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase domain protein; KEGG: ppr:PBPRA1194 malonyl Coa-acyl carrier protein transacylase; ACP S-malonyltransferase 1628235 4270420 Mlg_1422 Alkalilimnicola ehrlichii MLHE-1 ACP S-malonyltransferase YP_742261.1 1627291 R 187272 CDS YP_742262.1 114320579 4270421 complement(1628334..1629305) 1 NC_008340.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 1629305 4270421 Mlg_1423 Alkalilimnicola ehrlichii MLHE-1 3-oxoacyl-ACP synthase YP_742262.1 1628334 R 187272 CDS YP_742263.1 114320580 4270422 complement(1629302..1630330) 1 NC_008340.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX 1630330 4270422 Mlg_1424 Alkalilimnicola ehrlichii MLHE-1 glycerol-3-phosphate acyltransferase PlsX YP_742263.1 1629302 R 187272 CDS YP_742264.1 114320581 4270423 complement(1630405..1630584) 1 NC_008340.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 1630584 rpmF 4270423 rpmF Alkalilimnicola ehrlichii MLHE-1 50S ribosomal protein L32 YP_742264.1 1630405 R 187272 CDS YP_742265.1 114320582 4270424 complement(1630618..1631163) 1 NC_008340.1 PFAM: protein of unknown function DUF177; KEGG: sde:Sde_1625 hypothetical protein; hypothetical protein 1631163 4270424 Mlg_1426 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742265.1 1630618 R 187272 CDS YP_742266.1 114320583 4270425 1631285..1631884 1 NC_008340.1 TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: pfo:Pfl_4162 Maf-like protein; maf protein 1631884 4270425 Mlg_1427 Alkalilimnicola ehrlichii MLHE-1 maf protein YP_742266.1 1631285 D 187272 CDS YP_742267.1 114320584 4270426 complement(1631895..1632830) 1 NC_008340.1 PFAM: peptidase S49; KEGG: noc:Noc_2845 peptidase S49, SppA; peptidase S49 1632830 4270426 Mlg_1428 Alkalilimnicola ehrlichii MLHE-1 peptidase S49 YP_742267.1 1631895 R 187272 CDS YP_742268.1 114320585 4270427 complement(1632838..1633821) 1 NC_008340.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: mca:MCA1479 ribosomal large subunit pseudouridine synthase C; ribosomal large subunit pseudouridine synthase C 1633821 4270427 Mlg_1429 Alkalilimnicola ehrlichii MLHE-1 ribosomal large subunit pseudouridine synthase C YP_742268.1 1632838 R 187272 CDS YP_742269.1 114320586 4269240 1634203..1637424 1 NC_008340.1 TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: csa:Csal_1592 ribonuclease, Rne/Rng family; ribonuclease E 1637424 4269240 Mlg_1430 Alkalilimnicola ehrlichii MLHE-1 ribonuclease E YP_742269.1 1634203 D 187272 CDS YP_742270.1 114320587 4269241 complement(1637508..1638005) 1 NC_008340.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: nmu:Nmul_A1063 protein tyrosine phosphatase; protein tyrosine phosphatase 1638005 4269241 Mlg_1431 Alkalilimnicola ehrlichii MLHE-1 protein tyrosine phosphatase YP_742270.1 1637508 R 187272 CDS YP_742271.1 114320588 4269242 1638156..1638425 1 NC_008340.1 hypothetical protein 1638425 4269242 Mlg_1432 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742271.1 1638156 D 187272 CDS YP_742272.1 114320589 4269243 complement(1638422..1639201) 1 NC_008340.1 KEGG: ecs:ECs1001 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase); TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase; 3-deoxy-D-manno-octulosonate cytidylyltransferase 1639201 4269243 Mlg_1433 Alkalilimnicola ehrlichii MLHE-1 3-deoxy-D-manno-octulosonate cytidylyltransferase YP_742272.1 1638422 R 187272 CDS YP_742273.1 114320590 4269244 complement(1639205..1640200) 1 NC_008340.1 transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase 1640200 lpxK 4269244 lpxK Alkalilimnicola ehrlichii MLHE-1 tetraacyldisaccharide 4'-kinase YP_742273.1 1639205 R 187272 CDS YP_742274.1 114320591 4269245 complement(1640241..1640654) 1 NC_008340.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: hch:HCH_02701 biopolymer transport protein; biopolymer transport protein ExbD/TolR 1640654 4269245 Mlg_1435 Alkalilimnicola ehrlichii MLHE-1 biopolymer transport protein ExbD/TolR YP_742274.1 1640241 R 187272 CDS YP_742275.1 114320592 4269246 complement(1640656..1641312) 1 NC_008340.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: noc:Noc_2673 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 1641312 4269246 Mlg_1436 Alkalilimnicola ehrlichii MLHE-1 MotA/TolQ/ExbB proton channel YP_742275.1 1640656 R 187272 CDS YP_742276.1 114320593 4269247 complement(1641369..1643621) 1 NC_008340.1 PFAM: ComEC/Rec2-related protein; KEGG: noc:Noc_2672 DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-like protein 1643621 4269247 Mlg_1437 Alkalilimnicola ehrlichii MLHE-1 ComEC/Rec2-like protein YP_742276.1 1641369 R 187272 CDS YP_742277.1 114320594 4269248 1643736..1644326 1 NC_008340.1 KEGG: pae:PA2985 hypothetical protein; hypothetical protein 1644326 4269248 Mlg_1438 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742277.1 1643736 D 187272 CDS YP_742278.1 114320595 4269249 complement(1644341..1645051) 1 NC_008340.1 KEGG: mca:MCA2625 lipoprotein ABC transporter, ATP-binding protein LolD; TIGRFAM: lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; lipoprotein releasing system, ATP-binding protein 1645051 4269249 Mlg_1439 Alkalilimnicola ehrlichii MLHE-1 lipoprotein releasing system, ATP-binding protein YP_742278.1 1644341 R 187272 CDS YP_742279.1 114320596 4269250 complement(1645044..1646291) 1 NC_008340.1 TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: noc:Noc_2669 lipoprotein releasing system, transmembrane protein, LolC/E family; LolC/E family lipoprotein releasing system, transmembrane protein 1646291 4269250 Mlg_1440 Alkalilimnicola ehrlichii MLHE-1 LolC/E family lipoprotein releasing system, transmembrane protein YP_742279.1 1645044 R 187272 CDS YP_742280.1 114320597 4269251 complement(1646316..1647032) 1 NC_008340.1 PFAM: sugar fermentation stimulation protein; KEGG: noc:Noc_2279 sugar fermentation stimulation protein; sugar fermentation stimulation protein 1647032 4269251 Mlg_1441 Alkalilimnicola ehrlichii MLHE-1 sugar fermentation stimulation protein YP_742280.1 1646316 R 187272 CDS YP_742281.1 114320598 4269252 1647158..1647475 1 NC_008340.1 KEGG: sde:Sde_1807 hypothetical protein; hypothetical protein 1647475 4269252 Mlg_1442 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742281.1 1647158 D 187272 CDS YP_742282.1 114320599 4269253 1647504..1648601 1 NC_008340.1 PFAM: Porphyromonas-type peptidyl-arginine deiminase; KEGG: gme:Gmet_0711 porphyromonas-type peptidyl-arginine deiminase; peptidyl-arginine deiminase 1648601 4269253 Mlg_1443 Alkalilimnicola ehrlichii MLHE-1 peptidyl-arginine deiminase YP_742282.1 1647504 D 187272 CDS YP_742283.1 114320600 4269254 1648646..1649530 1 NC_008340.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: gsu:GSU1027 glycosyl hydrolase, family 10; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 1649530 4269254 Mlg_1444 Alkalilimnicola ehrlichii MLHE-1 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_742283.1 1648646 D 187272 CDS YP_742284.1 114320601 4269255 1649534..1650664 1 NC_008340.1 PFAM: DAHP synthetase I/KDSA; KEGG: nmu:Nmul_A0091 3-deoxy-7-phosphoheptulonate synthase; DAHP synthetase I/KDSA 1650664 4269255 Mlg_1445 Alkalilimnicola ehrlichii MLHE-1 DAHP synthetase I/KDSA YP_742284.1 1649534 D 187272 CDS YP_742285.1 114320602 4269256 1650839..1651057 1 NC_008340.1 TIGRFAM: translation initiation factor IF-1; PFAM: RNA binding S1 domain protein; S1, IF1 family protein; KEGG: noc:Noc_2598 translation initiation factor IF-1; translation initiation factor 1 1651057 4269256 Mlg_1446 Alkalilimnicola ehrlichii MLHE-1 translation initiation factor 1 YP_742285.1 1650839 D 187272 CDS YP_742286.1 114320603 4270228 complement(1651112..1653382) 1 NC_008340.1 KEGG: mca:MCA1789 ATP-dependent Clp protease, ATP-binding subunit ClpA; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; ATP-dependent Clp protease ATP-binding subunit ClpA 1653382 4270228 Mlg_1447 Alkalilimnicola ehrlichii MLHE-1 ATP-dependent Clp protease ATP-binding subunit ClpA YP_742286.1 1651112 R 187272 CDS YP_742287.1 114320604 4270229 complement(1653533..1653853) 1 NC_008340.1 involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA; ATP-dependent Clp protease adaptor protein ClpS 1653853 clpS 4270229 clpS Alkalilimnicola ehrlichii MLHE-1 ATP-dependent Clp protease adaptor protein ClpS YP_742287.1 1653533 R 187272 CDS YP_742288.1 114320605 4270230 1654151..1655161 1 NC_008340.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: xcv:XCV0263 transcriptional regulator, LysR family; LysR family transcriptional regulator 1655161 4270230 Mlg_1449 Alkalilimnicola ehrlichii MLHE-1 LysR family transcriptional regulator YP_742288.1 1654151 D 187272 CDS YP_742289.1 114320606 4270231 1655161..1655631 1 NC_008340.1 PFAM: NUDIX hydrolase; KEGG: mfa:Mfla_2114 NUDIX hydrolase; NUDIX hydrolase 1655631 4270231 Mlg_1450 Alkalilimnicola ehrlichii MLHE-1 NUDIX hydrolase YP_742289.1 1655161 D 187272 CDS YP_742290.1 114320607 4270232 1655667..1656767 1 NC_008340.1 PFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; PP-loop domain protein; KEGG: bps:BPSL2889 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1656767 4270232 Mlg_1451 Alkalilimnicola ehrlichii MLHE-1 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase YP_742290.1 1655667 D 187272 CDS YP_742291.1 114320608 4270233 1656782..1657399 1 NC_008340.1 HflD; UPF0274; in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein; in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis; hypothetical protein 1657399 4270233 Mlg_1452 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742291.1 1656782 D 187272 CDS YP_742292.2 161484717 4270234 complement(1657518..1660097) 1 NC_008340.1 catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 1660097 4270234 Mlg_1453 Alkalilimnicola ehrlichii MLHE-1 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase YP_742292.2 1657518 R 187272 CDS YP_742293.1 114320610 4270235 1660337..1663081 1 NC_008340.1 TIGRFAM: aconitate hydratase 1; PFAM: aconitate hydratase domain protein; KEGG: hch:HCH_06874 aconitate hydratase 1; aconitate hydratase 1 1663081 4270235 Mlg_1454 Alkalilimnicola ehrlichii MLHE-1 aconitate hydratase 1 YP_742293.1 1660337 D 187272 CDS YP_742294.1 114320611 4270236 1663218..1664192 1 NC_008340.1 PFAM: OmpA/MotB domain protein; KEGG: hch:HCH_04990 outer membrane protein and related peptidoglycan-associated (LipO)protein; OmpA/MotB domain-containing protein 1664192 4270236 Mlg_1455 Alkalilimnicola ehrlichii MLHE-1 OmpA/MotB domain-containing protein YP_742294.1 1663218 D 187272 CDS YP_742295.1 114320612 4270237 1664210..1664635 1 NC_008340.1 KEGG: sat:SYN_02998 esterase; esterase 1664635 4270237 Mlg_1456 Alkalilimnicola ehrlichii MLHE-1 esterase YP_742295.1 1664210 D 187272 CDS YP_742296.1 114320613 4270238 complement(1664657..1665535) 1 NC_008340.1 TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase; phosphoribosyl-ATP pyrophosphohydrolase; KEGG: mag:amb2392 predicted pyrophosphatase; nucleotide pyrophosphohydrolase 1665535 4270238 Mlg_1457 Alkalilimnicola ehrlichii MLHE-1 nucleotide pyrophosphohydrolase YP_742296.1 1664657 R 187272 CDS YP_742297.1 114320614 4270239 1665624..1666253 1 NC_008340.1 PFAM: regulatory protein, TetR; KEGG: sth:STH2189 TetR family transcriptional regulator; TetR family transcriptional regulator 1666253 4270239 Mlg_1458 Alkalilimnicola ehrlichii MLHE-1 TetR family transcriptional regulator YP_742297.1 1665624 D 187272 CDS YP_742298.1 114320615 4270240 complement(1666289..1666975) 1 NC_008340.1 PFAM: Glutathione S-transferase, N-terminal domain; KEGG: bur:Bcep18194_A5556 glutathione S-transferase-like; glutathione S-transferase-like protein 1666975 4270240 Mlg_1459 Alkalilimnicola ehrlichii MLHE-1 glutathione S-transferase-like protein YP_742298.1 1666289 R 187272 CDS YP_742299.1 114320616 4270241 complement(1667021..1667428) 1 NC_008340.1 PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein 1667428 4270241 Mlg_1460 Alkalilimnicola ehrlichii MLHE-1 TPR repeat-containing protein YP_742299.1 1667021 R 187272 CDS YP_742300.1 114320617 4270242 1667469..1668716 1 NC_008340.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1668716 ispG 4270242 ispG Alkalilimnicola ehrlichii MLHE-1 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_742300.1 1667469 D 187272 CDS YP_742301.1 114320618 4270243 complement(1668830..1669276) 1 NC_008340.1 KEGG: sil:SPO1614 hypothetical protein; hypothetical protein 1669276 4270243 Mlg_1462 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742301.1 1668830 R 187272 CDS YP_742302.1 114320619 4270244 complement(1669378..1670400) 1 NC_008340.1 PFAM: dihydroorotate dehydrogenase; KEGG: mfa:Mfla_0506 dihydroorotate oxidase; dihydroorotate oxidase 1670400 4270244 Mlg_1463 Alkalilimnicola ehrlichii MLHE-1 dihydroorotate oxidase YP_742302.1 1669378 R 187272 CDS YP_742303.1 114320620 4270245 1670581..1671354 1 NC_008340.1 PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: eba:ebA4391 chromosome partitioning protein, ParA family protein; cobyrinic acid a,c-diamide synthase 1671354 4270245 Mlg_1464 Alkalilimnicola ehrlichii MLHE-1 cobyrinic acid a,c-diamide synthase YP_742303.1 1670581 D 187272 CDS YP_742304.1 114320621 4269257 1671388..1672590 1 NC_008340.1 TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: hch:HCH_02605 membrane-bound lytic murein transglycosylase B; lytic murein transglycosylase 1672590 4269257 Mlg_1465 Alkalilimnicola ehrlichii MLHE-1 lytic murein transglycosylase YP_742304.1 1671388 D 187272 CDS YP_742305.1 114320622 4269258 complement(1672587..1673099) 1 NC_008340.1 KEGG: dsy:DSY1917 hypothetical protein; hypothetical protein 1673099 4269258 Mlg_1466 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742305.1 1672587 R 187272 CDS YP_742306.1 114320623 4269259 complement(1673096..1673686) 1 NC_008340.1 KEGG: csa:Csal_2331 hypothetical protein; hypothetical protein 1673686 4269259 Mlg_1467 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742306.1 1673096 R 187272 CDS YP_742307.1 114320624 4269260 complement(1673724..1674311) 1 NC_008340.1 PFAM: LemA family protein; KEGG: noc:Noc_1832 LemA; LemA family protein 1674311 4269260 Mlg_1468 Alkalilimnicola ehrlichii MLHE-1 LemA family protein YP_742307.1 1673724 R 187272 CDS YP_742308.1 114320625 4269261 complement(1674315..1675286) 1 NC_008340.1 PFAM: Patatin; KEGG: nmu:Nmul_A0164 patatin; patatin 1675286 4269261 Mlg_1469 Alkalilimnicola ehrlichii MLHE-1 patatin YP_742308.1 1674315 R 187272 CDS YP_742309.1 114320626 4269262 complement(1675293..1675982) 1 NC_008340.1 KEGG: pae:PA5496 hypothetical protein; hypothetical protein 1675982 4269262 Mlg_1470 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742309.1 1675293 R 187272 CDS YP_742310.1 114320627 4269263 complement(1676030..1679317) 1 NC_008340.1 KEGG: mca:MCA2543 ribonucleoside reductase, intein-containing; TIGRFAM: Protein splicing (intein) site; ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: ribonucleotide reductase large subunit; SMART: Hedgehog/intein hint domain protein; ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 1679317 4269263 Mlg_1471 Alkalilimnicola ehrlichii MLHE-1 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent YP_742310.1 1676030 R 187272 CDS YP_742311.1 114320628 4269264 1679762..1682110 1 NC_008340.1 PFAM: RNA binding S1 domain protein; SMART: Resolvase, RNase H domain protein fold; KEGG: eba:ebA6834 conserved hypothetical protein, s1 RNA binding domain protein; RNA-binding S1 domain-containing protein 1682110 4269264 Mlg_1472 Alkalilimnicola ehrlichii MLHE-1 RNA-binding S1 domain-containing protein YP_742311.1 1679762 D 187272 CDS YP_742312.1 114320629 4269265 1682107..1684461 1 NC_008340.1 PFAM: helicase domain protein; helicase-associated domain protein; DEAD/DEAH box helicase domain protein; KEGG: vpa:VP1259 ATP-dependent helicase; helicase 1684461 4269265 Mlg_1473 Alkalilimnicola ehrlichii MLHE-1 helicase YP_742312.1 1682107 D 187272 CDS YP_742313.1 114320630 4269266 complement(1684502..1685497) 1 NC_008340.1 KEGG: csa:Csal_2568 transcriptional regulator-like protein; transcriptional regulator-like protein 1685497 4269266 Mlg_1474 Alkalilimnicola ehrlichii MLHE-1 transcriptional regulator-like protein YP_742313.1 1684502 R 187272 CDS YP_742314.1 114320631 4269267 1685772..1686995 1 NC_008340.1 KEGG: csa:Csal_1457 hypothetical protein; hypothetical protein 1686995 4269267 Mlg_1475 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742314.1 1685772 D 187272 CDS YP_742315.1 114320632 4269268 1687037..1689061 1 NC_008340.1 KEGG: csa:Csal_1456 hypothetical protein; hypothetical protein 1689061 4269268 Mlg_1476 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742315.1 1687037 D 187272 CDS YP_742316.1 114320633 4269269 complement(1689062..1689421) 1 NC_008340.1 hypothetical protein 1689421 4269269 Mlg_1477 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742316.1 1689062 R 187272 CDS YP_742317.1 114320634 4269270 1689621..1689908 1 NC_008340.1 KEGG: tcx:Tcr_1933 uncharacterized conserved coiled coil protein; hypothetical protein 1689908 4269270 Mlg_1478 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742317.1 1689621 D 187272 CDS YP_742318.1 114320635 4269952 complement(1690318..1690518) 1 NC_008340.1 PFAM: carbon storage regulator; KEGG: mca:MCA0391 carbon storage regulator; carbon storage regulator CsrA 1690518 4269952 Mlg_1479 Alkalilimnicola ehrlichii MLHE-1 carbon storage regulator CsrA YP_742318.1 1690318 R 187272 CDS YP_742319.1 114320636 4269953 complement(1690676..1691926) 1 NC_008340.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase 1691926 4269953 Mlg_1480 Alkalilimnicola ehrlichii MLHE-1 aspartate kinase YP_742319.1 1690676 R 187272 CDS YP_742320.1 114320637 4269954 complement(1691995..1694604) 1 NC_008340.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 1694604 alaS 4269954 alaS Alkalilimnicola ehrlichii MLHE-1 alanyl-tRNA synthetase YP_742320.1 1691995 R 187272 CDS YP_742321.1 114320638 4269955 complement(1694653..1695111) 1 NC_008340.1 binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities; recombination regulator RecX 1695111 recX 4269955 recX Alkalilimnicola ehrlichii MLHE-1 recombination regulator RecX YP_742321.1 1694653 R 187272 CDS YP_742322.1 114320639 4269956 complement(1695119..1696162) 1 NC_008340.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 1696162 recA 4269956 recA Alkalilimnicola ehrlichii MLHE-1 recombinase A YP_742322.1 1695119 R 187272 CDS YP_742323.1 114320640 4269957 complement(1696296..1696802) 1 NC_008340.1 PFAM: CinA domain protein; KEGG: tbd:Tbd_2195 CinA protein; CinA domain-containing protein 1696802 4269957 Mlg_1484 Alkalilimnicola ehrlichii MLHE-1 CinA domain-containing protein YP_742323.1 1696296 R 187272 CDS YP_742324.1 114320641 4269958 1696849..1699485 1 NC_008340.1 This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 1699485 4269958 Mlg_1485 Alkalilimnicola ehrlichii MLHE-1 DNA mismatch repair protein MutS YP_742324.1 1696849 D 187272 CDS YP_742325.1 114320642 4269959 1699593..1699916 1 NC_008340.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: xac:XAC1762 ferredoxin; 4Fe-4S ferredoxin 1699916 4269959 Mlg_1486 Alkalilimnicola ehrlichii MLHE-1 4Fe-4S ferredoxin YP_742325.1 1699593 D 187272 CDS YP_742326.1 114320643 4269960 complement(1700743..1701480) 1 NC_008340.1 KEGG: noc:Noc_2253 thiol-disulfide interchange protein DsbC; thiol-disulfide interchange protein DsbC 1701480 4269960 Mlg_1487 Alkalilimnicola ehrlichii MLHE-1 thiol-disulfide interchange protein DsbC YP_742326.1 1700743 R 187272 CDS YP_742327.1 114320644 4269961 complement(1701577..1702491) 1 NC_008340.1 TIGRFAM: tyrosine recombinase XerD; PFAM: phage integrase; phage integrase domain protein SAM domain protein; KEGG: pae:PA3738 integrase/recombinase XerD; tyrosine recombinase XerD 1702491 4269961 Mlg_1488 Alkalilimnicola ehrlichii MLHE-1 tyrosine recombinase XerD YP_742327.1 1701577 R 187272 CDS YP_742328.1 114320645 4269962 complement(1702466..1703263) 1 NC_008340.1 PFAM: band 7 protein; KEGG: tbd:Tbd_0490 stomatin-like transmembrane protein, band 7 protein; hypothetical protein 1703263 4269962 Mlg_1489 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742328.1 1702466 R 187272 CDS YP_742329.1 114320646 4269963 1703405..1704487 1 NC_008340.1 KEGG: xac:XAC0889 hypothetical protein; RNA 2'-O-ribose methyltransferase 1704487 4269963 Mlg_1490 Alkalilimnicola ehrlichii MLHE-1 RNA 2'-O-ribose methyltransferase YP_742329.1 1703405 D 187272 CDS YP_742330.1 114320647 4269964 1704569..1704988 1 NC_008340.1 PFAM: Fe-S metabolism associated SufE; KEGG: rru:Rru_A3475 Fe-S metabolism associated SufE; Fe-S metabolism associated SufE 1704988 4269964 Mlg_1491 Alkalilimnicola ehrlichii MLHE-1 Fe-S metabolism associated SufE YP_742330.1 1704569 D 187272 CDS YP_742331.1 114320648 4269965 1705019..1705186 1 NC_008340.1 hypothetical protein 1705186 4269965 Mlg_1492 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742331.1 1705019 D 187272 CDS YP_742332.1 114320649 4269966 1705222..1706226 1 NC_008340.1 PFAM: alpha/beta hydrolase fold; KEGG: mag:amb4214 lysophospholipase; alpha/beta hydrolase fold protein 1706226 4269966 Mlg_1493 Alkalilimnicola ehrlichii MLHE-1 alpha/beta hydrolase fold protein YP_742332.1 1705222 D 187272 CDS YP_742333.1 114320650 4269967 1706496..1707866 1 NC_008340.1 TIGRFAM: Twin-arginine translocation pathway signal; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: rru:Rru_A2307 twin-arginine translocation pathway signal; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1707866 4269967 Mlg_1494 Alkalilimnicola ehrlichii MLHE-1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_742333.1 1706496 D 187272 CDS YP_742334.1 114320651 4269968 1707909..1708298 1 NC_008340.1 hypothetical protein 1708298 4269968 Mlg_1495 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742334.1 1707909 D 187272 CDS YP_742335.1 114320652 4269853 1708469..1709137 1 NC_008340.1 PFAM: Haem oxygenase; KEGG: dra:DRA0052m heme oxygenase; Heme oxygenase 1709137 4269853 Mlg_1496 Alkalilimnicola ehrlichii MLHE-1 Heme oxygenase YP_742335.1 1708469 D 187272 CDS YP_742336.1 114320653 4269854 1709115..1711184 1 NC_008340.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; PAS fold-2 domain protein; KEGG: rsp:RSP_4191 phytochrome sensor diguanylate cyclase/phosphodiesterase; GAF sensor protein 1711184 4269854 Mlg_1497 Alkalilimnicola ehrlichii MLHE-1 GAF sensor protein YP_742336.1 1709115 D 187272 CDS YP_742337.1 114320654 4269855 1711289..1712263 1 NC_008340.1 PFAM: alpha/beta hydrolase fold; KEGG: sru:SRU_2682 3-oxoadipate enol-lactone hydrolase; alpha/beta hydrolase 1712263 4269855 Mlg_1498 Alkalilimnicola ehrlichii MLHE-1 alpha/beta hydrolase YP_742337.1 1711289 D 187272 CDS YP_742338.1 114320655 4269856 complement(1712245..1713576) 1 NC_008340.1 KEGG: nmu:Nmul_A1979 hypothetical protein; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme YliG; PFAM: protein of unknown function UPF0004; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; MiaB-like tRNA modifying protein YliG 1713576 4269856 Mlg_1499 Alkalilimnicola ehrlichii MLHE-1 MiaB-like tRNA modifying protein YliG YP_742338.1 1712245 R 187272 CDS YP_742339.1 114320656 4269857 complement(1713725..1714381) 1 NC_008340.1 KEGG: sme:SMc00257 probable outer-membrane protein; outer-membrane protein 1714381 4269857 Mlg_1500 Alkalilimnicola ehrlichii MLHE-1 outer-membrane protein YP_742339.1 1713725 R 187272 CDS YP_742340.1 114320657 4269858 1714510..1715598 1 NC_008340.1 PFAM: FAD dependent oxidoreductase; KEGG: bga:BG0778 hypothetical protein; FAD dependent oxidoreductase 1715598 4269858 Mlg_1501 Alkalilimnicola ehrlichii MLHE-1 FAD dependent oxidoreductase YP_742340.1 1714510 D 187272 CDS YP_742341.1 114320658 4269859 complement(1715622..1716203) 1 NC_008340.1 3'-5' exoribonuclease specific for small oligoribonuclotides; oligoribonuclease 1716203 4269859 Mlg_1502 Alkalilimnicola ehrlichii MLHE-1 oligoribonuclease YP_742341.1 1715622 R 187272 CDS YP_742342.1 114320659 4269860 1716242..1717246 1 NC_008340.1 TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC; KEGG: csa:Csal_1269 GTPase EngC; ribosome small subunit-dependent GTPase A 1717246 4269860 Mlg_1503 Alkalilimnicola ehrlichii MLHE-1 ribosome small subunit-dependent GTPase A YP_742342.1 1716242 D 187272 CDS YP_742343.1 114320660 4269861 complement(1717262..1718119) 1 NC_008340.1 PFAM: OmpA/MotB domain protein; KEGG: pfo:Pfl_0513 OmpA/MotB; OmpA/MotB domain-containing protein 1718119 4269861 Mlg_1504 Alkalilimnicola ehrlichii MLHE-1 OmpA/MotB domain-containing protein YP_742343.1 1717262 R 187272 CDS YP_742344.1 114320661 4269862 complement(1718124..1718981) 1 NC_008340.1 KEGG: rso:RSp1411 probable chemotaxis (motility protein A) transmembrane; chemotaxis (motility protein A) transmembrane 1718981 4269862 Mlg_1505 Alkalilimnicola ehrlichii MLHE-1 chemotaxis (motility protein A) transmembrane YP_742344.1 1718124 R 187272 CDS YP_742345.1 114320662 4269863 1719102..1720547 1 NC_008340.1 KEGG: sde:Sde_2025 signal transduction protein; hypothetical protein 1720547 4269863 Mlg_1506 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742345.1 1719102 D 187272 CDS YP_742346.1 114320663 4269864 complement(1720553..1720897) 1 NC_008340.1 PFAM: histidine triad (HIT) protein; KEGG: ade:Adeh_0180 histidine triad (HIT) protein; histidine triad (HIT) protein 1720897 4269864 Mlg_1507 Alkalilimnicola ehrlichii MLHE-1 histidine triad (HIT) protein YP_742346.1 1720553 R 187272 CDS YP_742347.1 114320664 4269865 complement(1720914..1721513) 1 NC_008340.1 involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 1721513 recR 4269865 recR Alkalilimnicola ehrlichii MLHE-1 recombination protein RecR YP_742347.1 1720914 R 187272 CDS YP_742348.1 114320665 4269866 complement(1721521..1721844) 1 NC_008340.1 PFAM: conserved hypothetical protein 103; KEGG: plu:plu3840 hypothetical protein; hypothetical protein 1721844 4269866 Mlg_1509 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742348.1 1721521 R 187272 CDS YP_742349.1 114320666 4269867 complement(1721875..1723821) 1 NC_008340.1 KEGG: pae:PA1532 DNA polymerase subunits gamma and tau; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; DNA polymerase III, tau subunit/DNA polymerase III subunit gamma 1723821 4269867 Mlg_1510 Alkalilimnicola ehrlichii MLHE-1 DNA polymerase III, tau subunit/DNA polymerase III subunit gamma YP_742349.1 1721875 R 187272 CDS YP_742350.1 114320667 4269067 1724089..1724460 1 NC_008340.1 PFAM: protein of unknown function DUF37; KEGG: csa:Csal_1884 protein of unknown function DUF37; hypothetical protein 1724460 4269067 Mlg_1511 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742350.1 1724089 D 187272 CDS YP_742351.1 114320668 4269068 complement(1724451..1724786) 1 NC_008340.1 PFAM: Rhodanese domain protein; KEGG: ade:Adeh_0436 rhodanese-like; rhodanese domain-containing protein 1724786 4269068 Mlg_1512 Alkalilimnicola ehrlichii MLHE-1 rhodanese domain-containing protein YP_742351.1 1724451 R 187272 CDS YP_742352.1 114320669 4269069 complement(1724773..1725447) 1 NC_008340.1 hypothetical protein 1725447 4269069 Mlg_1513 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742352.1 1724773 R 187272 CDS YP_742353.1 114320670 4269070 1725695..1727182 1 NC_008340.1 catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; involved in growth under gluconeogenic conditions and in glycolytic activity at high ATP concentrations in Corynebacterium; NAD and NADP dependent; glyceraldehyde-3-phosphate dehydrogenase 1727182 4269070 Mlg_1514 Alkalilimnicola ehrlichii MLHE-1 glyceraldehyde-3-phosphate dehydrogenase YP_742353.1 1725695 D 187272 CDS YP_742354.1 114320671 4269071 1727200..1727784 1 NC_008340.1 PFAM: rRNA methylase; Methyltransferase type 11; Methyltransferase type 12; KEGG: sru:SRU_1525 rRNA methylase superfamily; rRNA methylase 1727784 4269071 Mlg_1515 Alkalilimnicola ehrlichii MLHE-1 rRNA methylase YP_742354.1 1727200 D 187272 CDS YP_742355.1 114320672 4269072 complement(1727819..1728715) 1 NC_008340.1 PFAM: UspA domain protein; KEGG: plt:Plut_0297 hypothetical protein; UspA domain-containing protein 1728715 4269072 Mlg_1516 Alkalilimnicola ehrlichii MLHE-1 UspA domain-containing protein YP_742355.1 1727819 R 187272 CDS YP_742356.1 114320673 4269073 complement(1728708..1731149) 1 NC_008340.1 PFAM: peptidase S16, lon domain protein; KEGG: mca:MCA0853 ATP-dependent protease; peptidase S16, lon domain-containing protein 1731149 4269073 Mlg_1517 Alkalilimnicola ehrlichii MLHE-1 peptidase S16, lon domain-containing protein YP_742356.1 1728708 R 187272 CDS YP_742357.1 114320674 4269074 complement(1731293..1732531) 1 NC_008340.1 PFAM: toxic anion resistance family protein; KEGG: hch:HCH_05411 uncharacterized protein involved in tellurite resistance; toxic anion resistance family protein 1732531 4269074 Mlg_1518 Alkalilimnicola ehrlichii MLHE-1 toxic anion resistance family protein YP_742357.1 1731293 R 187272 CDS YP_742358.1 114320675 4269075 complement(1732548..1733483) 1 NC_008340.1 hypothetical protein 1733483 4269075 Mlg_1519 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742358.1 1732548 R 187272 CDS YP_742359.1 114320676 4269076 complement(1733735..1734211) 1 NC_008340.1 KEGG: pol:Bpro_0272 cupin region; cupin region 1734211 4269076 Mlg_1520 Alkalilimnicola ehrlichii MLHE-1 cupin region YP_742359.1 1733735 R 187272 CDS YP_742360.1 114320677 4269077 1734271..1734984 1 NC_008340.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: tdn:Tmden_0645 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor; diguanylate cyclase 1734984 4269077 Mlg_1521 Alkalilimnicola ehrlichii MLHE-1 diguanylate cyclase YP_742360.1 1734271 D 187272 CDS YP_742361.1 114320678 4269078 1735184..1737355 1 NC_008340.1 KEGG: vch:VC1560 catalase/peroxidase; TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase; catalase/peroxidase HPI 1737355 4269078 Mlg_1522 Alkalilimnicola ehrlichii MLHE-1 catalase/peroxidase HPI YP_742361.1 1735184 D 187272 CDS YP_742362.1 114320679 4269079 complement(1737486..1737875) 1 NC_008340.1 hypothetical protein 1737875 4269079 Mlg_1523 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742362.1 1737486 R 187272 CDS YP_742363.1 114320680 4269080 complement(1738030..1738842) 1 NC_008340.1 hypothetical protein 1738842 4269080 Mlg_1524 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742363.1 1738030 R 187272 CDS YP_742364.1 114320681 4269081 1739328..1740050 1 NC_008340.1 PFAM: glycosyl transferase, family 2; KEGG: nmu:Nmul_A1366 glycosyl transferase, family 2; glycosyl transferase 1740050 4269081 Mlg_1525 Alkalilimnicola ehrlichii MLHE-1 glycosyl transferase YP_742364.1 1739328 D 187272 CDS YP_742365.1 114320682 4269082 1740140..1740745 1 NC_008340.1 forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MogA 1740745 mogA 4269082 mogA Alkalilimnicola ehrlichii MLHE-1 molybdenum cofactor biosynthesis protein MogA YP_742365.1 1740140 D 187272 CDS YP_742366.1 114320683 4269083 1740885..1741184 1 NC_008340.1 hypothetical protein 1741184 4269083 Mlg_1527 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742366.1 1740885 D 187272 CDS YP_742367.1 114320684 4269084 complement(1741238..1742125) 1 NC_008340.1 PFAM: alpha/beta hydrolase fold; KEGG: rpc:RPC_1203 dipeptidyl aminopeptidases/acylaminoacyl-peptidases-like; alpha/beta hydrolase 1742125 4269084 Mlg_1528 Alkalilimnicola ehrlichii MLHE-1 alpha/beta hydrolase YP_742367.1 1741238 R 187272 CDS YP_742368.1 114320685 4270534 complement(1742504..1744021) 1 NC_008340.1 PFAM: Integrase, catalytic region; transposase IS3/IS911 family protein; KEGG: pol:Bpro_0339 integrase, catalytic region; integrase catalytic subunit 1744021 4270534 Mlg_1529 Alkalilimnicola ehrlichii MLHE-1 integrase catalytic subunit YP_742368.1 1742504 R 187272 CDS YP_742369.1 114320686 4270535 1744128..1745699 1 NC_008340.1 PFAM: Integrase, catalytic region; KEGG: bha:BH3965 transposase (22); integrase catalytic subunit 1745699 4270535 Mlg_1530 Alkalilimnicola ehrlichii MLHE-1 integrase catalytic subunit YP_742369.1 1744128 D 187272 CDS YP_742370.1 114320687 4270536 1745686..1746426 1 NC_008340.1 PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: mta:Moth_2240 IstB-like ATP-binding protein; IstB ATP binding domain-containing protein 1746426 4270536 Mlg_1531 Alkalilimnicola ehrlichii MLHE-1 IstB ATP binding domain-containing protein YP_742370.1 1745686 D 187272 CDS YP_742371.1 114320688 4270537 1746503..1748020 1 NC_008340.1 PFAM: Integrase, catalytic region; transposase IS3/IS911 family protein; KEGG: pol:Bpro_0339 integrase, catalytic region; integrase catalytic subunit 1748020 4270537 Mlg_1532 Alkalilimnicola ehrlichii MLHE-1 integrase catalytic subunit YP_742371.1 1746503 D 187272 CDS YP_742372.1 114320689 4270538 1748061..1748975 1 NC_008340.1 PFAM: phage integrase; KEGG: lpn:lpg1229 site specific recombinase; phage integrase 1748975 4270538 Mlg_1533 Alkalilimnicola ehrlichii MLHE-1 phage integrase YP_742372.1 1748061 D 187272 CDS YP_742373.1 114320690 4270539 1749103..1749591 1 NC_008340.1 PFAM: transposase IS3/IS911 family protein; KEGG: sdn:Sden_2169 hypothetical protein; transposase IS3/IS911 family protein 1749591 4270539 Mlg_1534 Alkalilimnicola ehrlichii MLHE-1 transposase IS3/IS911 family protein YP_742373.1 1749103 D 187272 CDS YP_742374.1 114320691 4270540 1749840..1750196 1 NC_008340.1 PFAM: IS66 Orf2 family protein; KEGG: rme:Rmet_1275 IS66 Orf2 like; IS66 Orf2 family protein 1750196 4270540 Mlg_1535 Alkalilimnicola ehrlichii MLHE-1 IS66 Orf2 family protein YP_742374.1 1749840 D 187272 CDS YP_742375.1 114320692 4270541 1750241..1751833 1 NC_008340.1 PFAM: transposase IS66; KEGG: ppu:PP3985 ISPpu13, transposase Orf2; transposase IS66 1751833 4270541 Mlg_1536 Alkalilimnicola ehrlichii MLHE-1 transposase IS66 YP_742375.1 1750241 D 187272 CDS YP_742376.1 114320693 4270542 1752015..1752209 1 NC_008340.1 KEGG: rfr:Rfer_1364 hypothetical protein; hypothetical protein 1752209 4270542 Mlg_1537 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742376.1 1752015 D 187272 CDS YP_742377.1 114320694 4270543 1752206..1755097 1 NC_008340.1 PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD/DEAH box helicase domain protein; KEGG: eba:ebA666 helicase (SNF2 family); helicase 1755097 4270543 Mlg_1538 Alkalilimnicola ehrlichii MLHE-1 helicase YP_742377.1 1752206 D 187272 CDS YP_742378.1 114320695 4270544 1755159..1758392 1 NC_008340.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: eba:ebA670 probable methylation subunit, type III restriction-modification system; DNA methylase N-4/N-6 domain-containing protein 1758392 4270544 Mlg_1539 Alkalilimnicola ehrlichii MLHE-1 DNA methylase N-4/N-6 domain-containing protein YP_742378.1 1755159 D 187272 CDS YP_742379.1 114320696 4270545 1758389..1761220 1 NC_008340.1 PFAM: SMC domain protein; PHP C-terminal domain protein; KEGG: mca:MCA3009 PHP N-terminal domain protein; SMC domain-containing protein 1761220 4270545 Mlg_1540 Alkalilimnicola ehrlichii MLHE-1 SMC domain-containing protein YP_742379.1 1758389 D 187272 CDS YP_742380.1 114320697 4270546 1761224..1762495 1 NC_008340.1 PFAM: AAA-4 family protein; KEGG: mca:MCA3010 hypothetical protein; transcriptional regulator 1762495 4270546 Mlg_1541 Alkalilimnicola ehrlichii MLHE-1 transcriptional regulator YP_742380.1 1761224 D 187272 CDS YP_742381.1 114320698 4270547 1762498..1765812 1 NC_008340.1 SMART: DEAD/DEAH box helicase domain protein; KEGG: eba:ebA675 conserved hypothetical protein, potential type III restriction enzyme; DEAD/DEAH box helicase domain-containing protein 1765812 4270547 Mlg_1542 Alkalilimnicola ehrlichii MLHE-1 DEAD/DEAH box helicase domain-containing protein YP_742381.1 1762498 D 187272 CDS YP_742382.1 114320699 4270550 complement(1767893..1769086) 1 NC_008340.1 KEGG: noc:Noc_2963 hypothetical protein; hypothetical protein 1769086 4270550 Mlg_1545 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742382.1 1767893 R 187272 CDS YP_742383.1 114320700 4269919 complement(1769083..1770222) 1 NC_008340.1 KEGG: noc:Noc_2964 hypothetical protein; hypothetical protein 1770222 4269919 Mlg_1546 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742383.1 1769083 R 187272 CDS YP_742384.1 114320701 4269920 complement(1770255..1772018) 1 NC_008340.1 hypothetical protein 1772018 4269920 Mlg_1547 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742384.1 1770255 R 187272 CDS YP_742385.1 114320702 4269921 1772139..1772492 1 NC_008340.1 KEGG: chy:CHY_0840 lipoprotein; lipoprotein 1772492 4269921 Mlg_1548 Alkalilimnicola ehrlichii MLHE-1 lipoprotein YP_742385.1 1772139 D 187272 CDS YP_742386.1 114320703 4269922 1772511..1773233 1 NC_008340.1 PFAM: glycosyl transferase, family 2; KEGG: nmu:Nmul_A1366 glycosyl transferase, family 2; glycosyl transferase 1773233 4269922 Mlg_1549 Alkalilimnicola ehrlichii MLHE-1 glycosyl transferase YP_742386.1 1772511 D 187272 CDS YP_742387.1 114320704 4269923 1773324..1773929 1 NC_008340.1 forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MogA 1773929 mogA 4269923 mogA Alkalilimnicola ehrlichii MLHE-1 molybdenum cofactor biosynthesis protein MogA YP_742387.1 1773324 D 187272 CDS YP_742388.1 114320705 4269924 1774056..1774370 1 NC_008340.1 hypothetical protein 1774370 4269924 Mlg_1551 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742388.1 1774056 D 187272 CDS YP_742389.1 114320706 4269926 complement(1774639..1775220) 1 NC_008340.1 PFAM: protein of unknown function DUF335, SprT; SMART: protein of unknown function SprT; KEGG: sdy:SDY_3128 hypothetical protein; hypothetical protein 1775220 4269926 Mlg_1552 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742389.1 1774639 R 187272 CDS YP_742390.1 114320707 4269927 complement(1775217..1776908) 1 NC_008340.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 1776908 4269927 Mlg_1553 Alkalilimnicola ehrlichii MLHE-1 dihydroxy-acid dehydratase YP_742390.1 1775217 R 187272 CDS YP_742391.1 114320708 4269928 complement(1777016..1777633) 1 NC_008340.1 hypothetical protein 1777633 4269928 Mlg_1554 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742391.1 1777016 R 187272 CDS YP_742392.1 114320709 4269929 complement(1777890..1778765) 1 NC_008340.1 PFAM: phosphate-selective porin O and P; KEGG: xcb:XC_1529 polyphosphate-selective porin O; phosphate-selective porin O and P 1778765 4269929 Mlg_1555 Alkalilimnicola ehrlichii MLHE-1 phosphate-selective porin O and P YP_742392.1 1777890 R 187272 CDS YP_742393.1 114320710 4269930 1779546..1780061 1 NC_008340.1 hypothetical protein 1780061 4269930 Mlg_1556 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742393.1 1779546 D 187272 CDS YP_742394.1 114320711 4269931 complement(1780158..1781246) 1 NC_008340.1 PFAM: protein of unknown function DUF59; KEGG: noc:Noc_0972 protein of unknown function DUF59; hypothetical protein 1781246 4269931 Mlg_1557 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742394.1 1780158 R 187272 CDS YP_742395.1 114320712 4269932 complement(1781323..1782051) 1 NC_008340.1 TIGRFAM: Twin-arginine translocation pathway signal; KEGG: aae:aq_234 Rieske-I iron sulfur protein; hypothetical protein 1782051 4269932 Mlg_1558 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742395.1 1781323 R 187272 CDS YP_742396.1 114320713 4269933 complement(1782150..1782575) 1 NC_008340.1 PFAM: molybdopterin biosynthesis MoaE; KEGG: aci:ACIAD1904 molybdopterin converting factor, large subunit; molybdopterin synthase subunit MoaE 1782575 4269933 Mlg_1559 Alkalilimnicola ehrlichii MLHE-1 molybdopterin synthase subunit MoaE YP_742396.1 1782150 R 187272 CDS YP_742397.1 114320714 4269934 complement(1782610..1785663) 1 NC_008340.1 KEGG: gme:Gmet_3085 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 1785663 4269934 Mlg_1560 Alkalilimnicola ehrlichii MLHE-1 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_742397.1 1782610 R 187272 CDS YP_742398.1 114320715 4269935 1785882..1786631 1 NC_008340.1 PFAM: LytTr DNA-binding region; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: bxe:Bxe_A2142 transcriptional regulator, LytR/AlgR family; PAS/PAC sensor protein 1786631 4269935 Mlg_1561 Alkalilimnicola ehrlichii MLHE-1 PAS/PAC sensor protein YP_742398.1 1785882 D 187272 CDS YP_742399.1 114320716 4270584 1786835..1787704 1 NC_008340.1 PFAM: molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: bxe:Bxe_A2144 carbon monoxide dehydrogenase, medium subunit (CoxM); carbon monoxide dehydrogenase, medium subunit 1787704 4270584 Mlg_1562 Alkalilimnicola ehrlichii MLHE-1 carbon monoxide dehydrogenase, medium subunit YP_742399.1 1786835 D 187272 CDS YP_742400.1 114320717 4270585 1787717..1788214 1 NC_008340.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bxe:Bxe_A2145 carbon monoxide dehydrogenase, small subunit (CoxS); carbon monoxide dehydrogenase, small subunit 1788214 4270585 Mlg_1563 Alkalilimnicola ehrlichii MLHE-1 carbon monoxide dehydrogenase, small subunit YP_742400.1 1787717 D 187272 CDS YP_742401.1 114320718 4270586 1788275..1791358 1 NC_008340.1 TIGRFAM: carbon-monoxide dehydrogenase, large subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; carbon monoxide dehydrogenase subunit G; KEGG: bxe:Bxe_A2146 carbon monoxide dehydrogenase form I, large subunit; carbon monoxide dehydrogenase, large subunit apoprotein 1791358 4270586 Mlg_1564 Alkalilimnicola ehrlichii MLHE-1 carbon monoxide dehydrogenase, large subunit apoprotein YP_742401.1 1788275 D 187272 CDS YP_742402.1 114320719 4270587 1791361..1792242 1 NC_008340.1 PFAM: ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: bxe:Bxe_A2148 MoxR-like ATPase, CoxD; ATPase 1792242 4270587 Mlg_1565 Alkalilimnicola ehrlichii MLHE-1 ATPase YP_742402.1 1791361 D 187272 CDS YP_742403.1 114320720 4270588 1792239..1793372 1 NC_008340.1 PFAM: VWA containing CoxE family protein; SMART: von Willebrand factor, type A; KEGG: bxe:Bxe_C0034 carbon monoxide dehydrogenase, CoxE subunit; von Willebrand factor A 1793372 4270588 Mlg_1566 Alkalilimnicola ehrlichii MLHE-1 von Willebrand factor A YP_742403.1 1792239 D 187272 CDS YP_742404.1 114320721 4270589 1793391..1794284 1 NC_008340.1 PFAM: protein of unknown function DUF182; KEGG: bxe:Bxe_C0035 carbon monoxide dehydrogenase, CoxF subunit; hypothetical protein 1794284 4270589 Mlg_1567 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742404.1 1793391 D 187272 CDS YP_742405.1 114320722 4270590 1794281..1794883 1 NC_008340.1 PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: mta:Moth_2003 uncharacterized MobA-related protein-like; molybdenum cofactor cytidylyltransferase 1794883 4270590 Mlg_1568 Alkalilimnicola ehrlichii MLHE-1 molybdenum cofactor cytidylyltransferase YP_742405.1 1794281 D 187272 CDS YP_742406.1 114320723 4270591 1794880..1795695 1 NC_008340.1 PFAM: protein of unknown function DUF182; KEGG: ape:APE2227 xanthine dehydrogenase accessory factor; hypothetical protein 1795695 4270591 Mlg_1569 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742406.1 1794880 D 187272 CDS YP_742407.1 114320724 4270592 1795700..1796134 1 NC_008340.1 PFAM: nitrogen-fixing NifU domain protein; KEGG: bps:BPSL2373 NifU family protein; NifU domain-containing protein 1796134 4270592 Mlg_1570 Alkalilimnicola ehrlichii MLHE-1 NifU domain-containing protein YP_742407.1 1795700 D 187272 CDS YP_742408.1 114320725 4270593 complement(1796128..1797891) 1 NC_008340.1 PFAM: type II secretion system protein E; General secretory system II, protein E domain protein; SMART: AAA ATPase; KEGG: tte:TTE1262 predicted ATPases involved in pili biogenesis, PilB homologs; type II secretion system protein E 1797891 4270593 Mlg_1571 Alkalilimnicola ehrlichii MLHE-1 type II secretion system protein E YP_742408.1 1796128 R 187272 CDS YP_742409.1 114320726 4270594 complement(1797888..1799612) 1 NC_008340.1 KEGG: syf:Synpcc7942_1158 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase 1799612 4270594 Mlg_1572 Alkalilimnicola ehrlichii MLHE-1 PAS/PAC sensor-containing diguanylate cyclase YP_742409.1 1797888 R 187272 CDS YP_742410.1 114320727 4270595 complement(1799734..1800933) 1 NC_008340.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: tbd:Tbd_1581 secretion protein HlyD; RND family efflux transporter MFP subunit 1800933 4270595 Mlg_1573 Alkalilimnicola ehrlichii MLHE-1 RND family efflux transporter MFP subunit YP_742410.1 1799734 R 187272 CDS YP_742411.1 114320728 4270596 complement(1800938..1803307) 1 NC_008340.1 PFAM: protein of unknown function DUF214; KEGG: tbd:Tbd_1582 ABC transporter, permease; hypothetical protein 1803307 4270596 Mlg_1574 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742411.1 1800938 R 187272 CDS YP_742412.1 114320729 4270597 complement(1803307..1804371) 1 NC_008340.1 KEGG: hch:HCH_05283 hypothetical protein; hypothetical protein 1804371 4270597 Mlg_1575 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742412.1 1803307 R 187272 CDS YP_742413.1 114320730 4270598 complement(1804365..1805075) 1 NC_008340.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tbd:Tbd_1583 ABC transporter ATPase; ABC transporter-like protein 1805075 4270598 Mlg_1576 Alkalilimnicola ehrlichii MLHE-1 ABC transporter-like protein YP_742413.1 1804365 R 187272 CDS YP_742414.1 114320731 4270599 complement(1805112..1807244) 1 NC_008340.1 PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9A, prolyl oligopeptidase domain protein beta-propeller; KEGG: rpc:RPC_1332 oligopeptidase B; oligopeptidase B 1807244 4270599 Mlg_1577 Alkalilimnicola ehrlichii MLHE-1 oligopeptidase B YP_742414.1 1805112 R 187272 CDS YP_742415.1 114320732 4270600 complement(1807245..1808831) 1 NC_008340.1 PFAM: AMP-dependent synthetase and ligase; KEGG: hma:rrnAC0573 long-chain fatty-acid-CoA ligase; AMP-dependent synthetase/ligase 1808831 4270600 Mlg_1578 Alkalilimnicola ehrlichii MLHE-1 AMP-dependent synthetase/ligase YP_742415.1 1807245 R 187272 CDS YP_742416.1 114320733 4268550 1809017..1809817 1 NC_008340.1 PFAM: TatD-related deoxyribonuclease; KEGG: xcb:XC_0310 type V secretory pathway protein; Sec-independent protein translocase TatD 1809817 4268550 Mlg_1579 Alkalilimnicola ehrlichii MLHE-1 Sec-independent protein translocase TatD YP_742416.1 1809017 D 187272 CDS YP_742417.1 114320734 4268551 complement(1809845..1810876) 1 NC_008340.1 TIGRFAM: TIM-barrel protein, yjbN family; PFAM: dihydrouridine synthase, DuS; KEGG: noc:Noc_2960 dihydrouridine synthase TIM-barrel protein YjbN; tRNA-dihydrouridine synthase A 1810876 4268551 Mlg_1580 Alkalilimnicola ehrlichii MLHE-1 tRNA-dihydrouridine synthase A YP_742417.1 1809845 R 187272 CDS YP_742418.1 114320735 4268552 1811021..1811263 1 NC_008340.1 PFAM: glutaredoxin 2; KEGG: mca:MCA1544 hypothetical protein; glutaredoxin 2 1811263 4268552 Mlg_1581 Alkalilimnicola ehrlichii MLHE-1 glutaredoxin 2 YP_742418.1 1811021 D 187272 CDS YP_742419.1 114320736 4268553 1811260..1811823 1 NC_008340.1 KEGG: csa:Csal_1565 ErfK/YbiS/YcfS/YnhG; ErfK/YbiS/YcfS/YnhG family protein 1811823 4268553 Mlg_1582 Alkalilimnicola ehrlichii MLHE-1 ErfK/YbiS/YcfS/YnhG family protein YP_742419.1 1811260 D 187272 CDS YP_742420.1 114320737 4268554 1811893..1812180 1 NC_008340.1 KEGG: csa:Csal_1564 hypothetical protein; hypothetical protein 1812180 4268554 Mlg_1583 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742420.1 1811893 D 187272 CDS YP_742421.1 114320738 4268555 complement(1812241..1813230) 1 NC_008340.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: csa:Csal_1566 ErfK/YbiS/YcfS/YnhG; ErfK/YbiS/YcfS/YnhG family protein 1813230 4268555 Mlg_1584 Alkalilimnicola ehrlichii MLHE-1 ErfK/YbiS/YcfS/YnhG family protein YP_742421.1 1812241 R 187272 CDS YP_742422.1 114320739 4268556 complement(1813286..1813885) 1 NC_008340.1 PFAM: NUDIX hydrolase; KEGG: eba:ebA5123 hypothetical protein; NUDIX hydrolase 1813885 4268556 Mlg_1585 Alkalilimnicola ehrlichii MLHE-1 NUDIX hydrolase YP_742422.1 1813286 R 187272 CDS YP_742423.1 114320740 4268557 complement(1813896..1814891) 1 NC_008340.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 1814891 4268557 Mlg_1586 Alkalilimnicola ehrlichii MLHE-1 lipoyl synthase YP_742423.1 1813896 R 187272 CDS YP_742424.1 114320741 4268558 1814990..1816177 1 NC_008340.1 SMART: PDZ/DHR/GLGF domain protein; KEGG: nmu:Nmul_A2382 PDZ/DHR/GLGF; PDZ/DHR/GLGF domain-containing protein 1816177 4268558 Mlg_1587 Alkalilimnicola ehrlichii MLHE-1 PDZ/DHR/GLGF domain-containing protein YP_742424.1 1814990 D 187272 CDS YP_742425.1 114320742 4268559 1816357..1816689 1 NC_008340.1 TIGRFAM: Twin-arginine translocation pathway signal; PFAM: High potential iron-sulfur protein; KEGG: rso:RSc3086 probable high potential iron-sulfur (hipip) signal peptide protein; high potential iron-sulfur protein 1816689 4268559 Mlg_1588 Alkalilimnicola ehrlichii MLHE-1 high potential iron-sulfur protein YP_742425.1 1816357 D 187272 CDS YP_742426.1 114320743 4268560 1816900..1817226 1 NC_008340.1 TIGRFAM: Twin-arginine translocation pathway signal; PFAM: High potential iron-sulfur protein; KEGG: rso:RSc3086 probable high potential iron-sulfur (hipip) signal peptide protein; high potential iron-sulfur protein 1817226 4268560 Mlg_1589 Alkalilimnicola ehrlichii MLHE-1 high potential iron-sulfur protein YP_742426.1 1816900 D 187272 CDS YP_742427.1 114320744 4268561 1817385..1817858 1 NC_008340.1 KEGG: pae:PA1040 hypothetical protein; hypothetical protein 1817858 4268561 Mlg_1590 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742427.1 1817385 D 187272 CDS YP_742428.1 114320745 4268562 complement(1817806..1818699) 1 NC_008340.1 PFAM: alpha/beta hydrolase fold; KEGG: rru:Rru_A0559 alpha/beta hydrolase fold; alpha/beta hydrolase 1818699 4268562 Mlg_1591 Alkalilimnicola ehrlichii MLHE-1 alpha/beta hydrolase YP_742428.1 1817806 R 187272 CDS YP_742429.1 114320746 4268563 1818823..1821468 1 NC_008340.1 TIGRFAM: aminopeptidase N; PFAM: peptidase M1, membrane alanine aminopeptidase; KEGG: mca:MCA0774 aminopeptidase N; aminopeptidase 1821468 pepN 4268563 pepN Alkalilimnicola ehrlichii MLHE-1 aminopeptidase YP_742429.1 1818823 D 187272 CDS YP_742430.1 114320747 4268564 1821513..1823639 1 NC_008340.1 KEGG: csa:Csal_1519 carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; peptidase 1823639 4268564 Mlg_1593 Alkalilimnicola ehrlichii MLHE-1 peptidase YP_742430.1 1821513 D 187272 CDS YP_742431.1 114320748 4268565 1823720..1824847 1 NC_008340.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: cvi:CV2082 enoyl-CoA hydratase; enoyl-CoA hydratase 1824847 4268565 Mlg_1594 Alkalilimnicola ehrlichii MLHE-1 enoyl-CoA hydratase YP_742431.1 1823720 D 187272 CDS YP_742432.1 114320749 4268566 1825145..1825501 1 NC_008340.1 hypothetical protein 1825501 4268566 Mlg_1595 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742432.1 1825145 D 187272 CDS YP_742433.1 114320750 4268567 complement(1825507..1826340) 1 NC_008340.1 KEGG: cvi:CV0192 hypothetical protein; hypothetical protein 1826340 4268567 Mlg_1596 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742433.1 1825507 R 187272 CDS YP_742434.1 114320751 4268295 complement(1826517..1827395) 1 NC_008340.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: pae:PA3474 conserved hypothetical protein; hypothetical protein 1827395 4268295 Mlg_1597 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742434.1 1826517 R 187272 CDS YP_742435.1 114320752 4268296 1827466..1827915 1 NC_008340.1 TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger, DksA/TraR C4-type; KEGG: rme:Rmet_0126 transcriptional regulators, TraR/DksA family; TraR/DksA family transcriptional regulator 1827915 4268296 Mlg_1598 Alkalilimnicola ehrlichii MLHE-1 TraR/DksA family transcriptional regulator YP_742435.1 1827466 D 187272 CDS YP_742436.1 114320753 4268297 complement(1827982..1829484) 1 NC_008340.1 PFAM: GTP-binding protein, HSR1-related; KEGG: ppr:PBPRA1571 hypothetical protein; HSR1-like GTP-binding protein 1829484 4268297 Mlg_1599 Alkalilimnicola ehrlichii MLHE-1 HSR1-like GTP-binding protein YP_742436.1 1827982 R 187272 CDS YP_742437.1 114320754 4268298 complement(1829514..1830734) 1 NC_008340.1 KEGG: ana:all3530 hypothetical protein; hypothetical protein 1830734 4268298 Mlg_1600 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742437.1 1829514 R 187272 CDS YP_742438.1 114320755 4268299 complement(1830731..1833394) 1 NC_008340.1 PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; KEGG: aae:aq_999 long-chain-fatty-acid CoA ligase; AMP-dependent synthetase/ligase 1833394 4268299 Mlg_1601 Alkalilimnicola ehrlichii MLHE-1 AMP-dependent synthetase/ligase YP_742438.1 1830731 R 187272 CDS YP_742439.1 114320756 4268300 1833615..1834361 1 NC_008340.1 PFAM: multiple antibiotic resistance (MarC)-related proteins; KEGG: bms:BR1098 membrane protein; multiple antibiotic resistance (MarC)-like protein 1834361 4268300 Mlg_1602 Alkalilimnicola ehrlichii MLHE-1 multiple antibiotic resistance (MarC)-like protein YP_742439.1 1833615 D 187272 CDS YP_742440.1 114320757 4268302 1834613..1834993 1 NC_008340.1 PFAM: phosphoesterase, PA-phosphatase related; KEGG: xcb:XC_3277 hypothetical protein; PA-phosphatase-like phosphoesterase 1834993 4268302 Mlg_1604 Alkalilimnicola ehrlichii MLHE-1 PA-phosphatase-like phosphoesterase YP_742440.1 1834613 D 187272 CDS YP_742441.1 114320758 4268303 complement(1834976..1835530) 1 NC_008340.1 TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: mca:MCA2450 molybdopterin-guanine dinucleotide biosynthesis protein MobB; molybdopterin-guanine dinucleotide biosynthesis protein B 1835530 4268303 Mlg_1605 Alkalilimnicola ehrlichii MLHE-1 molybdopterin-guanine dinucleotide biosynthesis protein B YP_742441.1 1834976 R 187272 CDS YP_742442.1 114320759 4268304 complement(1835534..1836607) 1 NC_008340.1 KEGG: csa:Csal_2123 glycosyl transferase, group 1; group 1 glycosyl transferase 1836607 4268304 Mlg_1606 Alkalilimnicola ehrlichii MLHE-1 group 1 glycosyl transferase YP_742442.1 1835534 R 187272 CDS YP_742443.1 114320760 4268305 complement(1836604..1837380) 1 NC_008340.1 PFAM: glutamine amidotransferase class-I; KEGG: mlo:mll8746 hypothetical protein; glutamine amidotransferase class-I 1837380 4268305 Mlg_1607 Alkalilimnicola ehrlichii MLHE-1 glutamine amidotransferase class-I YP_742443.1 1836604 R 187272 CDS YP_742444.1 114320761 4268306 1837512..1837766 1 NC_008340.1 PFAM: Smr protein/MutS2; KEGG: deh:cbdb_A1156 hypothetical protein; Smr protein/MutS2 1837766 4268306 Mlg_1608 Alkalilimnicola ehrlichii MLHE-1 Smr protein/MutS2 YP_742444.1 1837512 D 187272 CDS YP_742445.1 114320762 4268307 complement(1837768..1838187) 1 NC_008340.1 PFAM: Class I peptide chain release factor; KEGG: ppr:PBPRB0779 hypothetical protein; class I peptide chain release factor 1838187 4268307 Mlg_1609 Alkalilimnicola ehrlichii MLHE-1 class I peptide chain release factor YP_742445.1 1837768 R 187272 CDS YP_742446.1 114320763 4268308 complement(1838201..1838668) 1 NC_008340.1 KEGG: mca:MCA0019 hypothetical protein; hypothetical protein 1838668 4268308 Mlg_1610 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742446.1 1838201 R 187272 CDS YP_742447.1 114320764 4268309 complement(1838750..1839622) 1 NC_008340.1 PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: nwi:Nwi_1896 UbiE/COQ5 methyltransferase; type 11 methyltransferase 1839622 4268309 Mlg_1611 Alkalilimnicola ehrlichii MLHE-1 type 11 methyltransferase YP_742447.1 1838750 R 187272 CDS YP_742448.1 114320765 4269344 complement(1839920..1840366) 1 NC_008340.1 PFAM: protein of unknown function DUF188; KEGG: hch:HCH_06960 hypothetical protein; hypothetical protein 1840366 4269344 Mlg_1612 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742448.1 1839920 R 187272 CDS YP_742449.1 114320766 4269345 complement(1840434..1841717) 1 NC_008340.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: rme:Rmet_0456 DEAD/DEAH box helicase-like protein; DEAD/DEAH box helicase domain-containing protein 1841717 4269345 Mlg_1613 Alkalilimnicola ehrlichii MLHE-1 DEAD/DEAH box helicase domain-containing protein YP_742449.1 1840434 R 187272 CDS YP_742450.1 114320767 4269346 1841923..1844019 1 NC_008340.1 KEGG: nme:NMB1278 site-specific recombinase; site-specific recombinase 1844019 4269346 Mlg_1614 Alkalilimnicola ehrlichii MLHE-1 site-specific recombinase YP_742450.1 1841923 D 187272 CDS YP_742451.1 114320768 4269347 1844102..1845283 1 NC_008340.1 catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine; cystathionine gamma-synthase 1845283 4269347 Mlg_1615 Alkalilimnicola ehrlichii MLHE-1 cystathionine gamma-synthase YP_742451.1 1844102 D 187272 CDS YP_742452.1 114320769 4269348 complement(1845373..1845852) 1 NC_008340.1 TIGRFAM: YbhB and YbcL; PFAM: PEBP family protein; KEGG: hch:HCH_02825 phospholipid-binding protein; PBP family phospholipid-binding protein 1845852 4269348 Mlg_1616 Alkalilimnicola ehrlichii MLHE-1 PBP family phospholipid-binding protein YP_742452.1 1845373 R 187272 CDS YP_742453.1 114320770 4269349 1846011..1846307 1 NC_008340.1 PFAM: KaiB domain protein; KEGG: syn:sll0486 circadian clock protein KaiB homolog; KaiB domain-containing protein 1846307 4269349 Mlg_1617 Alkalilimnicola ehrlichii MLHE-1 KaiB domain-containing protein YP_742453.1 1846011 D 187272 CDS YP_742454.1 114320771 4269350 1846372..1847319 1 NC_008340.1 KEGG: mag:amb1535 response regulator containing a CheY-like receiver domain and a GGDEF domain; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase 1847319 4269350 Mlg_1618 Alkalilimnicola ehrlichii MLHE-1 PAS/PAC sensor-containing diguanylate cyclase YP_742454.1 1846372 D 187272 CDS YP_742455.1 114320772 4269351 1847467..1849365 1 NC_008340.1 KEGG: rfr:Rfer_1021 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase 1849365 4269351 Mlg_1619 Alkalilimnicola ehrlichii MLHE-1 PAS/PAC and GAF sensor-containing diguanylate cyclase YP_742455.1 1847467 D 187272 CDS YP_742456.1 114320773 4269352 1849446..1851125 1 NC_008340.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; MASE1 domain protein; KEGG: rpa:RPA4247 two component low oxygen sensor histidine kinase with PAS domains, FixL; periplasmic sensor signal transduction histidine kinase 1851125 4269352 Mlg_1620 Alkalilimnicola ehrlichii MLHE-1 periplasmic sensor signal transduction histidine kinase YP_742456.1 1849446 D 187272 CDS YP_742457.1 114320774 4269353 1851118..1851723 1 NC_008340.1 PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: mlo:mll6606 response regulator FixJ; LuxR family transcriptional regulator 1851723 4269353 Mlg_1621 Alkalilimnicola ehrlichii MLHE-1 LuxR family transcriptional regulator YP_742457.1 1851118 D 187272 CDS YP_742458.1 114320775 4269354 1851867..1854341 1 NC_008340.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase, HAMP region domain protein; KEGG: pca:Pcar_2558 signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like; diguanylate cyclase/phosphodiesterase 1854341 4269354 Mlg_1622 Alkalilimnicola ehrlichii MLHE-1 diguanylate cyclase/phosphodiesterase YP_742458.1 1851867 D 187272 CDS YP_742459.1 114320776 4269355 1854338..1855738 1 NC_008340.1 PFAM: Na+/solute symporter; KEGG: hch:HCH_06692 Na+/proline symporter; Na+/solute symporter 1855738 4269355 Mlg_1623 Alkalilimnicola ehrlichii MLHE-1 Na+/solute symporter YP_742459.1 1854338 D 187272 CDS YP_742460.1 114320777 4269356 1855735..1856709 1 NC_008340.1 KEGG: dsy:DSY3490 hypothetical protein; hypothetical protein 1856709 4269356 Mlg_1624 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742460.1 1855735 D 187272 CDS YP_742461.1 114320778 4269357 complement(1856731..1857300) 1 NC_008340.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: rfr:Rfer_3389 alkylhydroperoxidase; carboxymuconolactone decarboxylase 1857300 4269357 Mlg_1625 Alkalilimnicola ehrlichii MLHE-1 carboxymuconolactone decarboxylase YP_742461.1 1856731 R 187272 CDS YP_742462.1 114320779 4269358 complement(1857484..1857873) 1 NC_008340.1 hypothetical protein 1857873 4269358 Mlg_1626 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742462.1 1857484 R 187272 CDS YP_742463.1 114320780 4269359 complement(1858085..1862110) 1 NC_008340.1 KEGG: noc:Noc_1301 ATP-dependent helicase HrpA; TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase domain protein; helicase-associated domain protein; protein of unknown function DUF1605; SMART: AAA ATPase; DEAD/DEAH box helicase domain protein; ATP-dependent helicase HrpA 1862110 4269359 Mlg_1627 Alkalilimnicola ehrlichii MLHE-1 ATP-dependent helicase HrpA YP_742463.1 1858085 R 187272 CDS YP_742464.1 114320781 4269360 complement(1862143..1862715) 1 NC_008340.1 TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; KEGG: pst:PSPTO2610 phosphoesterase; phosphodiesterase 1862715 4269360 Mlg_1628 Alkalilimnicola ehrlichii MLHE-1 phosphodiesterase YP_742464.1 1862143 R 187272 CDS YP_742465.1 114320782 4269361 complement(1862720..1863334) 1 NC_008340.1 catalyzes the formation of serine from phosphoserine; also has phosphoserine:homoserine phosphotransferase activity; phosphoserine phosphatase 1863334 thrH 4269361 thrH Alkalilimnicola ehrlichii MLHE-1 phosphoserine phosphatase YP_742465.1 1862720 R 187272 CDS YP_742466.1 114320783 4270351 1864096..1864767 1 NC_008340.1 PFAM: protein of unknown function UPF0005; KEGG: eba:ebA4143 hypothetical protein; hypothetical protein 1864767 4270351 Mlg_1630 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742466.1 1864096 D 187272 CDS YP_742467.1 114320784 4270352 complement(1864904..1866481) 1 NC_008340.1 PFAM: Sporulation domain protein; SMART: AAA ATPase; KEGG: pfo:Pfl_0412 hypothetical protein; sporulation domain-containing protein 1866481 4270352 Mlg_1631 Alkalilimnicola ehrlichii MLHE-1 sporulation domain-containing protein YP_742467.1 1864904 R 187272 CDS YP_742468.1 114320785 4270354 complement(1866746..1867621) 1 NC_008340.1 PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: mlo:mlr1196 probable transcriptional regulator; AraC family transcriptional regulator 1867621 4270354 Mlg_1632 Alkalilimnicola ehrlichii MLHE-1 AraC family transcriptional regulator YP_742468.1 1866746 R 187272 CDS YP_742469.1 114320786 4270355 complement(1867698..1868927) 1 NC_008340.1 PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: pol:Bpro_2645 methyltransferase type 11; type 11 methyltransferase 1868927 4270355 Mlg_1633 Alkalilimnicola ehrlichii MLHE-1 type 11 methyltransferase YP_742469.1 1867698 R 187272 CDS YP_742470.1 114320787 4270356 complement(1868945..1869634) 1 NC_008340.1 PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: sco:SCO5216 RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 factor 1869634 4270356 Mlg_1634 Alkalilimnicola ehrlichii MLHE-1 ECF subfamily RNA polymerase sigma-24 factor YP_742470.1 1868945 R 187272 CDS YP_742471.1 114320788 4270357 complement(1869786..1870019) 1 NC_008340.1 KEGG: tfu:Tfu_0549 anti-sigma factor; transmembrane anti-sigma factor 1870019 4270357 Mlg_1635 Alkalilimnicola ehrlichii MLHE-1 transmembrane anti-sigma factor YP_742471.1 1869786 R 187272 CDS YP_742472.1 114320789 4270358 1870237..1871022 1 NC_008340.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: pol:Bpro_2645 methyltransferase type 11; type 11 methyltransferase 1871022 4270358 Mlg_1636 Alkalilimnicola ehrlichii MLHE-1 type 11 methyltransferase YP_742472.1 1870237 D 187272 CDS YP_742473.1 114320790 4270359 1871158..1871895 1 NC_008340.1 PFAM: glutamine amidotransferase class-I; KEGG: xfa:XF0560 glutamine amidotransferase; glutamine amidotransferase class-I 1871895 4270359 Mlg_1637 Alkalilimnicola ehrlichii MLHE-1 glutamine amidotransferase class-I YP_742473.1 1871158 D 187272 CDS YP_742474.1 114320791 4270360 1872017..1875883 1 NC_008340.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein; FAD linked oxidase domain protein; KEGG: mfa:Mfla_0476 FAD linked oxidase-like protein; FAD linked oxidase domain-containing protein 1875883 4270360 Mlg_1638 Alkalilimnicola ehrlichii MLHE-1 FAD linked oxidase domain-containing protein YP_742474.1 1872017 D 187272 CDS YP_742475.1 114320792 4270361 complement(1875837..1877237) 1 NC_008340.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: ppr:PBPRB1001 hypothetical protein; MATE efflux family protein 1877237 4270361 Mlg_1639 Alkalilimnicola ehrlichii MLHE-1 MATE efflux family protein YP_742475.1 1875837 R 187272 CDS YP_742476.1 114320793 4270362 1877374..1878255 1 NC_008340.1 PFAM: protein of unknown function DUF151; KEGG: dde:Dde_2379 hypothetical protein; hypothetical protein 1878255 4270362 Mlg_1640 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742476.1 1877374 D 187272 CDS YP_742477.1 114320794 4270363 complement(1878292..1878843) 1 NC_008340.1 PFAM: response regulator receiver; helix-turn-helix, Fis-type; KEGG: bxe:Bxe_A4382 two component transcriptional regulator, fis family; response regulator receiver protein 1878843 4270363 Mlg_1641 Alkalilimnicola ehrlichii MLHE-1 response regulator receiver protein YP_742477.1 1878292 R 187272 CDS YP_742478.1 114320795 4270364 complement(1878840..1880279) 1 NC_008340.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: neu:NE1314 probable two-component sensor; periplasmic sensor signal transduction histidine kinase 1880279 4270364 Mlg_1642 Alkalilimnicola ehrlichii MLHE-1 periplasmic sensor signal transduction histidine kinase YP_742478.1 1878840 R 187272 CDS YP_742479.1 114320796 4270365 1880357..1882057 1 NC_008340.1 PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: csa:Csal_1999 ABC transporter related; ABC transporter-like protein 1882057 4270365 Mlg_1643 Alkalilimnicola ehrlichii MLHE-1 ABC transporter-like protein YP_742479.1 1880357 D 187272 CDS YP_742480.1 114320797 4270366 1882054..1883727 1 NC_008340.1 PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: csa:Csal_1998 ABC transporter related; ABC transporter-like protein 1883727 4270366 Mlg_1644 Alkalilimnicola ehrlichii MLHE-1 ABC transporter-like protein YP_742480.1 1882054 D 187272 CDS YP_742481.1 114320798 4270246 complement(1883724..1886882) 1 NC_008340.1 KEGG: rru:Rru_A0612 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 1886882 4270246 Mlg_1645 Alkalilimnicola ehrlichii MLHE-1 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_742481.1 1883724 R 187272 CDS YP_742482.1 114320799 4270247 1887193..1889382 1 NC_008340.1 catalyzes the formation of malate from glyoxylate and acetyl-CoA; malate synthase G 1889382 4270247 Mlg_1646 Alkalilimnicola ehrlichii MLHE-1 malate synthase G YP_742482.1 1887193 D 187272 CDS YP_742483.1 114320800 4270248 1889488..1890519 1 NC_008340.1 SMART: Rhodanese domain protein; KEGG: sco:SCO5854 thiosulfate sulfurtransferase; rhodanese domain-containing protein 1890519 4270248 Mlg_1647 Alkalilimnicola ehrlichii MLHE-1 rhodanese domain-containing protein YP_742483.1 1889488 D 187272 CDS YP_742484.1 114320801 4270249 complement(1890586..1891374) 1 NC_008340.1 KEGG: pfo:Pfl_0128 hypothetical protein; hypothetical protein 1891374 4270249 Mlg_1648 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742484.1 1890586 R 187272 CDS YP_742485.1 114320802 4270250 complement(1891374..1891982) 1 NC_008340.1 KEGG: tbd:Tbd_2490 hypothetical protein; hypothetical protein 1891982 4270250 Mlg_1649 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742485.1 1891374 R 187272 CDS YP_742486.1 114320803 4270251 complement(1891986..1892654) 1 NC_008340.1 KEGG: tbd:Tbd_2487 hypothetical protein; hypothetical protein 1892654 4270251 Mlg_1650 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742486.1 1891986 R 187272 CDS YP_742487.1 114320804 4270252 complement(1892657..1892899) 1 NC_008340.1 hypothetical protein 1892899 4270252 Mlg_1651 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742487.1 1892657 R 187272 CDS YP_742488.1 114320805 4270253 complement(1892896..1893765) 1 NC_008340.1 KEGG: mag:amb3366 probable taurine catabolism dioxygenase; taurine catabolism dioxygenase 1893765 4270253 Mlg_1652 Alkalilimnicola ehrlichii MLHE-1 taurine catabolism dioxygenase YP_742488.1 1892896 R 187272 CDS YP_742489.1 114320806 4270254 1893988..1895259 1 NC_008340.1 KEGG: mag:amb3367 sulfite reductase, dissimilatory-type alpha subunit; TIGRFAM: sulfite reductase, dissimilatory-type alpha subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; sulfite reductase, dissimilatory-type alpha subunit 1895259 4270254 Mlg_1653 Alkalilimnicola ehrlichii MLHE-1 sulfite reductase, dissimilatory-type alpha subunit YP_742489.1 1893988 D 187272 CDS YP_742490.1 114320807 4270255 1895293..1896375 1 NC_008340.1 KEGG: mag:amb3368 sulfite reductase, dissimilatory-type beta subunit; TIGRFAM: sulfite reductase, dissimilatory-type beta subunit; PFAM: nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; sulfite reductase, dissimilatory-type subunit beta 1896375 4270255 Mlg_1654 Alkalilimnicola ehrlichii MLHE-1 sulfite reductase, dissimilatory-type subunit beta YP_742490.1 1895293 D 187272 CDS YP_742491.1 114320808 4270256 1896388..1896747 1 NC_008340.1 PFAM: DsrE family protein; KEGG: tbd:Tbd_2483 DsrE protein; DsrE family protein 1896747 4270256 Mlg_1655 Alkalilimnicola ehrlichii MLHE-1 DsrE family protein YP_742491.1 1896388 D 187272 CDS YP_742492.1 114320809 4270257 1896764..1897150 1 NC_008340.1 PFAM: DsrE family protein; KEGG: mag:amb3370 uncharacterized protein involved in the oxidation of intracellular sulfur; DsrE family protein 1897150 4270257 Mlg_1656 Alkalilimnicola ehrlichii MLHE-1 DsrE family protein YP_742492.1 1896764 D 187272 CDS YP_742493.1 114320810 4270258 1897164..1897463 1 NC_008340.1 PFAM: DsrH family protein; KEGG: cch:Cag_1950 DsrH protein; DsrH family protein 1897463 4270258 Mlg_1657 Alkalilimnicola ehrlichii MLHE-1 DsrH family protein YP_742493.1 1897164 D 187272 CDS YP_742494.1 114320811 4270259 1897520..1897852 1 NC_008340.1 PFAM: DsrC family protein; KEGG: tbd:Tbd_2480 sulfite reductase; DsrC family protein 1897852 4270259 Mlg_1658 Alkalilimnicola ehrlichii MLHE-1 DsrC family protein YP_742494.1 1897520 D 187272 CDS YP_742495.1 114320812 4270260 1897898..1898665 1 NC_008340.1 PFAM: Nitrate reductase, gamma subunit; KEGG: tbd:Tbd_2479 DsrM protein; nitrate reductase subunit gamma 1898665 4270260 Mlg_1659 Alkalilimnicola ehrlichii MLHE-1 nitrate reductase subunit gamma YP_742495.1 1897898 D 187272 CDS YP_742496.1 114320813 4270261 1898662..1900209 1 NC_008340.1 KEGG: mag:amb3374 Fe-S oxidoreductase; Fe-S oxidoreductase 1900209 4270261 Mlg_1660 Alkalilimnicola ehrlichii MLHE-1 Fe-S oxidoreductase YP_742496.1 1898662 D 187272 CDS YP_742497.1 114320814 4270262 1900257..1902203 1 NC_008340.1 unknown function; glutamate synthase (NADPH) small subunit 1902203 4270262 Mlg_1661 Alkalilimnicola ehrlichii MLHE-1 glutamate synthase (NADPH) small subunit YP_742497.1 1900257 D 187272 CDS YP_742498.1 114320815 4270263 1902222..1902788 1 NC_008340.1 KEGG: mag:amb3376 Hdr-like menaquinol oxidoreductase cytochrome c subunit; hypothetical protein 1902788 4270263 Mlg_1662 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742498.1 1902222 D 187272 CDS YP_742499.1 114320816 4268895 1902778..1903563 1 NC_008340.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mag:amb3377 Fe-S-cluster-containing hydrogenase components 1; 4Fe-4S ferredoxin 1903563 4268895 Mlg_1663 Alkalilimnicola ehrlichii MLHE-1 4Fe-4S ferredoxin YP_742499.1 1902778 D 187272 CDS YP_742500.1 114320817 4268896 1903576..1904853 1 NC_008340.1 PFAM: Polysulphide reductase, NrfD; KEGG: mag:amb3378 Hdr-like menaquinol oxidoreductase integral membrane subunit; polysulfide reductase NrfD 1904853 4268896 Mlg_1664 Alkalilimnicola ehrlichii MLHE-1 polysulfide reductase NrfD YP_742500.1 1903576 D 187272 CDS YP_742501.1 114320818 4268897 1904869..1905867 1 NC_008340.1 PFAM: glycosyl transferase, family 3; KEGG: ppu:PP3997 hypothetical protein; hypothetical protein 1905867 4268897 Mlg_1665 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742501.1 1904869 D 187272 CDS YP_742502.1 114320819 4268898 1905884..1907302 1 NC_008340.1 TIGRFAM: cobyrinic acid a,c-diamide synthase; PFAM: Cobyrinic acid a,c-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: mag:amb3622 cobyrinic acid a,c-diamide synthase; hydrogenobyrinic acid a,c-diamide synthase /cobyrinate a,c-diamide synthase 1907302 4268898 Mlg_1666 Alkalilimnicola ehrlichii MLHE-1 hydrogenobyrinic acid a,c-diamide synthase /cobyrinate a,c-diamide synthase YP_742502.1 1905884 D 187272 CDS YP_742503.1 114320820 4268899 1907333..1908604 1 NC_008340.1 PFAM: protein of unknown function DUF395, YeeE/YedE; KEGG: tbd:Tbd_2201 probable transmembrane protein; hypothetical protein 1908604 4268899 Mlg_1667 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742503.1 1907333 D 187272 CDS YP_742504.1 114320821 4268900 1908624..1910378 1 NC_008340.1 TIGRFAM: sulfate transporter; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: eba:ebA4484 sulfate transporter; sulfate transporter 1910378 4268900 Mlg_1668 Alkalilimnicola ehrlichii MLHE-1 sulfate transporter YP_742504.1 1908624 D 187272 CDS YP_742505.1 114320822 4268901 complement(1910450..1911115) 1 NC_008340.1 PFAM: regulatory protein, LuxR; response regulator receiver; Bacterio-opsin activator, HTH domain protein; sigma-70 region 4 domain protein; KEGG: tbd:Tbd_2464 two component transcriptional regulator, LuxR family; LuxR family transcriptional regulator 1911115 4268901 Mlg_1669 Alkalilimnicola ehrlichii MLHE-1 LuxR family transcriptional regulator YP_742505.1 1910450 R 187272 CDS YP_742506.1 114320823 4268902 complement(1911115..1912455) 1 NC_008340.1 PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: rme:Rmet_2086 signal transduction histidine kinase, nitrate/nitrite-specific, NarQ; nitrate/nitrite-specific signal transduction histidine kinase NarQ 1912455 4268902 Mlg_1670 Alkalilimnicola ehrlichii MLHE-1 nitrate/nitrite-specific signal transduction histidine kinase NarQ YP_742506.1 1911115 R 187272 CDS YP_742507.1 114320824 4268903 1912869..1913066 1 NC_008340.1 hypothetical protein 1913066 4268903 Mlg_1671 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742507.1 1912869 D 187272 CDS YP_742508.1 114320825 4268904 1913110..1913340 1 NC_008340.1 PFAM: SirA family protein; KEGG: tbd:Tbd_0574 hypothetical protein; SirA family protein 1913340 4268904 Mlg_1672 Alkalilimnicola ehrlichii MLHE-1 SirA family protein YP_742508.1 1913110 D 187272 CDS YP_742509.1 114320826 4268905 1913434..1914072 1 NC_008340.1 PFAM: cytochrome c, class I; KEGG: vpa:VP1221 cytochrome subunit of sulfide dehydrogenase precursor; cytochrome c, class I 1914072 4268905 Mlg_1673 Alkalilimnicola ehrlichii MLHE-1 cytochrome c, class I YP_742509.1 1913434 D 187272 CDS YP_742510.1 114320827 4268906 1914100..1915413 1 NC_008340.1 TIGRFAM: Twin-arginine translocation pathway signal; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cch:Cag_2004 sulfide dehydrogenase, flavoprotein subunit; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1915413 4268906 Mlg_1674 Alkalilimnicola ehrlichii MLHE-1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_742510.1 1914100 D 187272 CDS YP_742511.1 114320828 4268907 1915502..1918426 1 NC_008340.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: tbd:Tbd_0570 DMSO reductase chain A; molybdopterin oxidoreductase Fe4S4 region 1918426 4268907 Mlg_1675 Alkalilimnicola ehrlichii MLHE-1 molybdopterin oxidoreductase Fe4S4 region YP_742511.1 1915502 D 187272 CDS YP_742512.1 114320829 4268908 1918423..1919115 1 NC_008340.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: tbd:Tbd_0571 DMSO reductase chain B; 4Fe-4S ferredoxin 1919115 4268908 Mlg_1676 Alkalilimnicola ehrlichii MLHE-1 4Fe-4S ferredoxin YP_742512.1 1918423 D 187272 CDS YP_742513.1 114320830 4268909 1919130..1920077 1 NC_008340.1 PFAM: DMSO reductase anchor subunit (DmsC); KEGG: tbd:Tbd_0572 DMSO reductase chain C; DMSO reductase anchor subunit DmsC 1920077 4268909 Mlg_1677 Alkalilimnicola ehrlichii MLHE-1 DMSO reductase anchor subunit DmsC YP_742513.1 1919130 D 187272 CDS YP_742514.1 114320831 4268910 1920168..1920758 1 NC_008340.1 PFAM: NapC/NirT cytochrome c domain protein; KEGG: rpc:RPC_1875 NapC/NirT cytochrome c-like; NapC/NirT cytochrome c domain-containing protein 1920758 4268910 Mlg_1678 Alkalilimnicola ehrlichii MLHE-1 NapC/NirT cytochrome c domain-containing protein YP_742514.1 1920168 D 187272 CDS YP_742515.1 114320832 4268911 1920918..1922363 1 NC_008340.1 TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mfa:Mfla_0652 uroporphyrin-III C-methyltransferase; precorrin-2 dehydrogenase 1922363 4268911 Mlg_1679 Alkalilimnicola ehrlichii MLHE-1 precorrin-2 dehydrogenase YP_742515.1 1920918 D 187272 CDS YP_742516.1 114320833 4268775 1922376..1922840 1 NC_008340.1 PFAM: Rhodanese domain protein; KEGG: plt:Plut_0032 rhodanese-like; rhodanese domain-containing protein 1922840 4268775 Mlg_1680 Alkalilimnicola ehrlichii MLHE-1 rhodanese domain-containing protein YP_742516.1 1922376 D 187272 CDS YP_742517.1 114320834 4268776 1922889..1923356 1 NC_008340.1 TIGRFAM: Twin-arginine translocation pathway signal; KEGG: tcx:Tcr_0603 sulfur oxidation protein SoxY-like; thiosulfate-binding protein SoxY 1923356 4268776 Mlg_1681 Alkalilimnicola ehrlichii MLHE-1 thiosulfate-binding protein SoxY YP_742517.1 1922889 D 187272 CDS YP_742518.1 114320835 4268777 1923376..1923663 1 NC_008340.1 KEGG: bja:bll1012 sulfur oxidation protein; sulfur compound chelating protein SoxZ 1923663 4268777 Mlg_1682 Alkalilimnicola ehrlichii MLHE-1 sulfur compound chelating protein SoxZ YP_742518.1 1923376 D 187272 CDS YP_742519.1 114320836 4268778 1923668..1924378 1 NC_008340.1 KEGG: rme:Rmet_4060 heme exporter protein CcmA; TIGRFAM: heme exporter protein CcmA; PFAM: ABC transporter related; SMART: AAA ATPase; heme exporter protein CcmA 1924378 4268778 Mlg_1683 Alkalilimnicola ehrlichii MLHE-1 heme exporter protein CcmA YP_742519.1 1923668 D 187272 CDS YP_742520.1 114320837 4268779 1924388..1925056 1 NC_008340.1 TIGRFAM: heme exporter protein CcmB; PFAM: cytochrome c-type biogenesis protein CcmB; KEGG: dar:Daro_3992 cytochrome c-type biogenesis protein CcmB; heme exporter protein CcmB 1925056 4268779 Mlg_1684 Alkalilimnicola ehrlichii MLHE-1 heme exporter protein CcmB YP_742520.1 1924388 D 187272 CDS YP_742521.1 114320838 4268780 1925106..1925921 1 NC_008340.1 TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein; KEGG: rme:Rmet_4058 heme exporter protein CcmC; heme exporter protein CcmC 1925921 4268780 Mlg_1685 Alkalilimnicola ehrlichii MLHE-1 heme exporter protein CcmC YP_742521.1 1925106 D 187272 CDS YP_742522.1 114320839 4268781 1926061..1926537 1 NC_008340.1 PFAM: CcmE/CycJ protein; KEGG: rfr:Rfer_0041 CcmE/CycJ protein; CcmE/CycJ protein 1926537 4268781 Mlg_1686 Alkalilimnicola ehrlichii MLHE-1 CcmE/CycJ protein YP_742522.1 1926061 D 187272 CDS YP_742523.1 114320840 4268782 1926552..1928552 1 NC_008340.1 TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: neu:NE0768 cytochrome c-type biogenesis protein (CcmF); cytochrome c-type biogenesis protein CcmF 1928552 4268782 Mlg_1687 Alkalilimnicola ehrlichii MLHE-1 cytochrome c-type biogenesis protein CcmF YP_742523.1 1926552 D 187272 CDS YP_742524.1 114320841 4268783 1928546..1929073 1 NC_008340.1 TIGRFAM: periplasmic protein thiol--disulphide oxidoreductase DsbE; PFAM: Redoxin domain protein; KEGG: mca:MCA0417 thiol:disulfide interchange protein DsbE; periplasmic protein thiol--disulfide oxidoreductase DsbE 1929073 4268783 Mlg_1688 Alkalilimnicola ehrlichii MLHE-1 periplasmic protein thiol--disulfide oxidoreductase DsbE YP_742524.1 1928546 D 187272 CDS YP_742525.1 114320842 4268784 1929070..1929573 1 NC_008340.1 PFAM: cytochrome C biogenesis protein; KEGG: xac:XAC1674 C-type cytochrome biogenesis protein; cytochrome C biogenesis protein 1929573 4268784 Mlg_1689 Alkalilimnicola ehrlichii MLHE-1 cytochrome C biogenesis protein YP_742525.1 1929070 D 187272 CDS YP_742526.1 114320843 4268785 1929570..1930457 1 NC_008340.1 PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: eba:ebA3526 cyctochrome C biogenesis protein; TPR repeat-containing protein 1930457 4268785 Mlg_1690 Alkalilimnicola ehrlichii MLHE-1 TPR repeat-containing protein YP_742526.1 1929570 D 187272 CDS YP_742527.1 114320844 4268786 complement(1930477..1931091) 1 NC_008340.1 PFAM: protein of unknown function DUF218; KEGG: ana:all1816 hypothetical protein; hypothetical protein 1931091 4268786 Mlg_1691 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742527.1 1930477 R 187272 CDS YP_742528.1 114320845 4268787 complement(1931271..1932713) 1 NC_008340.1 KEGG: tbd:Tbd_0101 peptidase S13, D-Ala-D-Ala carboxypeptidase C; TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: peptidase S13, D-Ala-D-Ala carboxypeptidase C; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 1932713 4268787 Mlg_1692 Alkalilimnicola ehrlichii MLHE-1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase YP_742528.1 1931271 R 187272 CDS YP_742529.1 114320846 4268788 1932826..1934877 1 NC_008340.1 PFAM: UvrD/REP helicase; KEGG: ade:Adeh_0097 UvrD/REP helicase; UvrD/REP helicase 1934877 4268788 Mlg_1693 Alkalilimnicola ehrlichii MLHE-1 UvrD/REP helicase YP_742529.1 1932826 D 187272 CDS YP_742530.1 114320847 4268789 complement(1934891..1935973) 1 NC_008340.1 PFAM: protein of unknown function UPF0118; KEGG: pca:Pcar_3090 hypothetical protein; hypothetical protein 1935973 4268789 Mlg_1694 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742530.1 1934891 R 187272 CDS YP_742531.1 114320848 4268790 complement(1935951..1938026) 1 NC_008340.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: son:SO4717 sensor histidine kinase; periplasmic sensor signal transduction histidine kinase 1938026 4268790 Mlg_1695 Alkalilimnicola ehrlichii MLHE-1 periplasmic sensor signal transduction histidine kinase YP_742531.1 1935951 R 187272 CDS YP_742532.1 114320849 4268791 complement(1938044..1939489) 1 NC_008340.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: son:SO4718 sigma-54 dependent response regulator; Fis family transcriptional regulator 1939489 4268791 Mlg_1696 Alkalilimnicola ehrlichii MLHE-1 Fis family transcriptional regulator YP_742532.1 1938044 R 187272 CDS YP_742533.1 114320850 4268792 1939651..1940631 1 NC_008340.1 LysR-type transcriptional regulator; contains helix-turn-helix (HTH) motif; in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon; autoregulates expression; crystal structure of Klebsiella aerogenes showed tetramer formation; transcriptional regulator CysB 1940631 cysB 4268792 cysB Alkalilimnicola ehrlichii MLHE-1 transcriptional regulator CysB YP_742533.1 1939651 D 187272 CDS YP_742534.1 114320851 4269784 complement(1940699..1941448) 1 NC_008340.1 hypothetical protein 1941448 4269784 Mlg_1698 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742534.1 1940699 R 187272 CDS YP_742535.1 114320852 4269785 complement(1941673..1942947) 1 NC_008340.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 1942947 4269785 Mlg_1699 Alkalilimnicola ehrlichii MLHE-1 seryl-tRNA synthetase YP_742535.1 1941673 R 187272 CDS YP_742536.1 114320853 4269786 1943353..1945788 1 NC_008340.1 TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: mca:MCA0592 nitrite reductase [NAD(P)H], large subunit; assimilatory nitrite reductase (NAD(P)H) large subunit 1945788 4269786 Mlg_1700 Alkalilimnicola ehrlichii MLHE-1 assimilatory nitrite reductase (NAD(P)H) large subunit YP_742536.1 1943353 D 187272 CDS YP_742537.1 114320854 4269787 1945840..1946238 1 NC_008340.1 TIGRFAM: nitrite reductase [NAD(P)H], small subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: mca:MCA0591 nitrite reductase [NAD(P)H], small subunit; assimilatory nitrite reductase (NAD(P)H) small subunit 1946238 4269787 Mlg_1701 Alkalilimnicola ehrlichii MLHE-1 assimilatory nitrite reductase (NAD(P)H) small subunit YP_742537.1 1945840 D 187272 CDS YP_742538.1 114320855 4269788 1946242..1948956 1 NC_008340.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: rso:RSp1219 probable nitrate reductase large subunit oxidoreductase; assimilatory nitrate reductase (NADH) alpha subunit apoprotein 1948956 4269788 Mlg_1702 Alkalilimnicola ehrlichii MLHE-1 assimilatory nitrate reductase (NADH) alpha subunit apoprotein YP_742538.1 1946242 D 187272 CDS YP_742539.1 114320856 4269789 1949259..1950662 1 NC_008340.1 TIGRFAM: Twin-arginine translocation pathway signal; KEGG: mca:MCA0589 nitrate transporter; nitrate transporter 1950662 4269789 Mlg_1703 Alkalilimnicola ehrlichii MLHE-1 nitrate transporter YP_742539.1 1949259 D 187272 CDS YP_742540.1 114320857 4269790 1950673..1951608 1 NC_008340.1 TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tbd:Tbd_2273 nitrate transport permease; nitrate ABC transporter, inner membrane subunit 1951608 4269790 Mlg_1704 Alkalilimnicola ehrlichii MLHE-1 nitrate ABC transporter, inner membrane subunit YP_742540.1 1950673 D 187272 CDS YP_742541.1 114320858 4269791 1951626..1952417 1 NC_008340.1 KEGG: sme:SMa0581 nitrate transport ATP binding protein, probable; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter related; SMART: AAA ATPase; nitrate ABC transporter ATPases C and D 1952417 4269791 Mlg_1705 Alkalilimnicola ehrlichii MLHE-1 nitrate ABC transporter ATPases C and D YP_742541.1 1951626 D 187272 CDS YP_742542.1 114320859 4269792 1952436..1953329 1 NC_008340.1 TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: pst:PSPTO3344 siroheme synthase; uroporphyrinogen-III C-methyltransferase 1953329 4269792 Mlg_1706 Alkalilimnicola ehrlichii MLHE-1 uroporphyrinogen-III C-methyltransferase YP_742542.1 1952436 D 187272 CDS YP_742543.1 114320860 4269793 1953326..1954171 1 NC_008340.1 PFAM: Uroporphyrinogen III synthase HEM4; KEGG: rpa:RPA4033 uroporphyrinogen III synthase HEM4; uroporphyrinogen III synthase HEM4 1954171 4269793 Mlg_1707 Alkalilimnicola ehrlichii MLHE-1 uroporphyrinogen III synthase HEM4 YP_742543.1 1953326 D 187272 CDS YP_742544.1 114320861 4269794 complement(1954210..1955505) 1 NC_008340.1 PFAM: ANTAR domain protein; Nitrate and nitrite sensing domain protein; KEGG: eca:ECA2995 nitrate-and nitrite-responsive positive regulator; response regulator receiver/ANTAR domain-containing protein 1955505 4269794 Mlg_1708 Alkalilimnicola ehrlichii MLHE-1 response regulator receiver/ANTAR domain-containing protein YP_742544.1 1954210 R 187272 CDS YP_742545.1 114320862 4269795 complement(1955832..1956506) 1 NC_008340.1 KEGG: noc:Noc_0497 membrane protein-like; hypothetical protein 1956506 4269795 Mlg_1709 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742545.1 1955832 R 187272 CDS YP_742546.1 114320863 4269796 complement(1956522..1957907) 1 NC_008340.1 PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; KEGG: pae:PA2613 ATPase; recombination factor protein RarA 1957907 4269796 Mlg_1710 Alkalilimnicola ehrlichii MLHE-1 recombination factor protein RarA YP_742546.1 1956522 R 187272 CDS YP_742547.1 114320864 4269797 complement(1957904..1958548) 1 NC_008340.1 PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: eba:ebA7039 outer membrane lipoprotein carrier protein LolA; outer membrane lipoprotein carrier protein LolA 1958548 4269797 Mlg_1711 Alkalilimnicola ehrlichii MLHE-1 outer membrane lipoprotein carrier protein LolA YP_742547.1 1957904 R 187272 CDS YP_742548.1 114320865 4269798 complement(1958584..1960953) 1 NC_008340.1 PFAM: cell divisionFtsK/SpoIIIE; KEGG: sde:Sde_1693 cell division protein FtsK; DNA translocase FtsK 1960953 4269798 Mlg_1712 Alkalilimnicola ehrlichii MLHE-1 DNA translocase FtsK YP_742548.1 1958584 R 187272 CDS YP_742549.1 114320866 4269799 1961164..1961940 1 NC_008340.1 leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase 1961940 aat 4269799 aat Alkalilimnicola ehrlichii MLHE-1 leucyl/phenylalanyl-tRNA--protein transferase YP_742549.1 1961164 D 187272 CDS YP_742550.1 114320867 4269800 1961930..1962649 1 NC_008340.1 Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate; arginyl-tRNA-protein transferase 1962649 4269800 Mlg_1714 Alkalilimnicola ehrlichii MLHE-1 arginyl-tRNA-protein transferase YP_742550.1 1961930 D 187272 CDS YP_742551.1 114320868 4268964 complement(1962618..1962881) 1 NC_008340.1 hypothetical protein 1962881 4268964 Mlg_1715 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742551.1 1962618 R 187272 CDS YP_742552.1 114320869 4268965 complement(1962901..1963992) 1 NC_008340.1 KEGG: gme:Gmet_0724 ribonuclease Z; beta-lactamase superfamily hydrolase 1963992 4268965 Mlg_1716 Alkalilimnicola ehrlichii MLHE-1 beta-lactamase superfamily hydrolase YP_742552.1 1962901 R 187272 CDS YP_742553.1 114320870 4268966 complement(1963997..1964413) 1 NC_008340.1 TIGRFAM: uncharacterized domain 1; PFAM: thioesterase superfamily protein; KEGG: cps:CPS_3094 thioesterase; hypothetical protein 1964413 4268966 Mlg_1717 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742553.1 1963997 R 187272 CDS YP_742554.1 114320871 4268967 complement(1964410..1965426) 1 NC_008340.1 CysK; forms a complex with serine acetyltransferase CysE; functions in cysteine biosynthesis; cysteine synthase A 1965426 4268967 Mlg_1718 Alkalilimnicola ehrlichii MLHE-1 cysteine synthase A YP_742554.1 1964410 R 187272 CDS YP_742555.1 114320872 4268968 complement(1965521..1967200) 1 NC_008340.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: ilo:IL1542 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase 1967200 4268968 Mlg_1719 Alkalilimnicola ehrlichii MLHE-1 acyl-CoA dehydrogenase YP_742555.1 1965521 R 187272 CDS YP_742556.1 114320873 4268969 1967321..1968619 1 NC_008340.1 KEGG: csa:Csal_1112 hypothetical protein; hypothetical protein 1968619 4268969 Mlg_1720 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742556.1 1967321 D 187272 CDS YP_742557.1 114320874 4268970 complement(1968654..1969259) 1 NC_008340.1 PFAM: GCN5-related N-acetyltransferase; KEGG: gvi:glr2385 probable acetyltransferase; GCN5-like N-acetyltransferase 1969259 4268970 Mlg_1721 Alkalilimnicola ehrlichii MLHE-1 GCN5-like N-acetyltransferase YP_742557.1 1968654 R 187272 CDS YP_742558.1 114320875 4268971 1969307..1970608 1 NC_008340.1 TIGRFAM: acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bce:BC2248 acetylornithine deacetylase; acetylornithine deacetylase 1970608 4268971 Mlg_1722 Alkalilimnicola ehrlichii MLHE-1 acetylornithine deacetylase YP_742558.1 1969307 D 187272 CDS YP_742559.1 114320876 4268972 1970630..1972663 1 NC_008340.1 PFAM: peptidase S15; X-Pro dipeptidyl-peptidase C-terminal domain protein; KEGG: noc:Noc_2221 peptidase S15; peptidase S15 1972663 4268972 Mlg_1723 Alkalilimnicola ehrlichii MLHE-1 peptidase S15 YP_742559.1 1970630 D 187272 CDS YP_742560.1 114320877 4268973 complement(1972703..1973734) 1 NC_008340.1 KEGG: noc:Noc_2222 hypothetical protein; hypothetical protein 1973734 4268973 Mlg_1724 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742560.1 1972703 R 187272 CDS YP_742561.1 114320878 4268974 complement(1973826..1975019) 1 NC_008340.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pfl:PFL_5773 conserved hypothetical protein TIGR00275; hypothetical protein 1975019 4268974 Mlg_1725 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742561.1 1973826 R 187272 CDS YP_742562.1 114320879 4268975 complement(1975090..1975902) 1 NC_008340.1 PFAM: glutamine amidotransferase, class-II; KEGG: pae:PA1307 hypothetical protein; glutamine amidotransferase, class-II 1975902 4268975 Mlg_1726 Alkalilimnicola ehrlichii MLHE-1 glutamine amidotransferase, class-II YP_742562.1 1975090 R 187272 CDS YP_742563.1 114320880 4268976 1976020..1977741 1 NC_008340.1 PFAM: peptidase M14, carboxypeptidase A; KEGG: syf:Synpcc7942_1581 peptidase M14, carboxypeptidase A; peptidase M14, carboxypeptidase A 1977741 4268976 Mlg_1727 Alkalilimnicola ehrlichii MLHE-1 peptidase M14, carboxypeptidase A YP_742563.1 1976020 D 187272 CDS YP_742564.1 114320881 4268977 complement(1977731..1979158) 1 NC_008340.1 PFAM: protein of unknown function UPF0027; KEGG: mca:MCA0195 hypothetical protein; hypothetical protein 1979158 4268977 Mlg_1728 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742564.1 1977731 R 187272 CDS YP_742565.1 114320882 4268978 complement(1979189..1979623) 1 NC_008340.1 PFAM: protein of unknown function DUF101; KEGG: tbd:Tbd_2360 tRNA nucleotidyltransferase/poly(A) polymerase; hypothetical protein 1979623 4268978 Mlg_1729 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742565.1 1979189 R 187272 CDS YP_742566.1 114320883 4268979 1979821..1980417 1 NC_008340.1 hypothetical protein 1980417 4268979 Mlg_1730 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742566.1 1979821 D 187272 CDS YP_742567.1 114320884 4268980 1980477..1981454 1 NC_008340.1 KEGG: tbd:Tbd_1465 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; ribose-phosphate pyrophosphokinase 1981454 4268980 Mlg_1731 Alkalilimnicola ehrlichii MLHE-1 ribose-phosphate pyrophosphokinase YP_742567.1 1980477 D 187272 CDS YP_742568.1 114320885 4268981 complement(1981426..1982544) 1 NC_008340.1 KEGG: rfr:Rfer_0391 hypothetical protein; hypothetical protein 1982544 4268981 Mlg_1732 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742568.1 1981426 R 187272 CDS YP_742569.1 114320886 4270840 1982619..1983284 1 NC_008340.1 PFAM: phosphoribosyltransferase; KEGG: sme:SMc01463 hypothetical protein; phosphoribosyltransferase 1983284 4270840 Mlg_1733 Alkalilimnicola ehrlichii MLHE-1 phosphoribosyltransferase YP_742569.1 1982619 D 187272 CDS YP_742570.1 114320887 4270841 complement(1983309..1984436) 1 NC_008340.1 KEGG: tbd:Tbd_1464 capsule biosynthesis protein; K07282 poly-gamma-glutamate synthesis protein (capsule biosynthesis protein); capsule biosynthesis protein 1984436 4270841 Mlg_1734 Alkalilimnicola ehrlichii MLHE-1 capsule biosynthesis protein YP_742570.1 1983309 R 187272 CDS YP_742571.1 114320888 4270842 complement(1984489..1985379) 1 NC_008340.1 Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues; endonuclease IV 1985379 4270842 Mlg_1735 Alkalilimnicola ehrlichii MLHE-1 endonuclease IV YP_742571.1 1984489 R 187272 CDS YP_742572.1 114320889 4270843 complement(1985475..1986428) 1 NC_008340.1 KEGG: bur:Bcep18194_C6952 hypothetical protein; hypothetical protein 1986428 4270843 Mlg_1736 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742572.1 1985475 R 187272 CDS YP_742573.1 114320890 4270844 1986522..1987946 1 NC_008340.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: xac:XAC2952 succinyl-diaminopimelate desuccinylase; peptidase M20 1987946 4270844 Mlg_1737 Alkalilimnicola ehrlichii MLHE-1 peptidase M20 YP_742573.1 1986522 D 187272 CDS YP_742574.1 114320891 4270845 complement(1988021..1988713) 1 NC_008340.1 PFAM: PhoU family protein; KEGG: syf:Synpcc7942_1912 photosystem I reaction center subunit XII; phosphate uptake regulator PhoU 1988713 4270845 Mlg_1738 Alkalilimnicola ehrlichii MLHE-1 phosphate uptake regulator PhoU YP_742574.1 1988021 R 187272 CDS YP_742575.1 114320892 4270846 complement(1988741..1989982) 1 NC_008340.1 PFAM: Na+/Pi-cotransporter; KEGG: rba:RB11050 NptA protein; Na+/Pi-cotransporter 1989982 4270846 Mlg_1739 Alkalilimnicola ehrlichii MLHE-1 Na+/Pi-cotransporter YP_742575.1 1988741 R 187272 CDS YP_742576.1 114320893 4270847 1990158..1990574 1 NC_008340.1 PFAM: CBS domain containing protein; KEGG: bja:blr7332 inosine-5'-monophosphate dehydrogenase; signal transduction protein 1990574 4270847 Mlg_1740 Alkalilimnicola ehrlichii MLHE-1 signal transduction protein YP_742576.1 1990158 D 187272 CDS YP_742577.1 114320894 4270848 complement(1990656..1991033) 1 NC_008340.1 hypothetical protein 1991033 4270848 Mlg_1741 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742577.1 1990656 R 187272 CDS YP_742578.1 114320895 4270849 complement(1991043..1995389) 1 NC_008340.1 KEGG: ana:alr3311 hypothetical protein; hypothetical protein 1995389 4270849 Mlg_1742 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742578.1 1991043 R 187272 CDS YP_742579.1 114320896 4270850 complement(1995414..1998317) 1 NC_008340.1 KEGG: gme:Gmet_1144 hypothetical protein; hypothetical protein 1998317 4270850 Mlg_1743 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742579.1 1995414 R 187272 CDS YP_742580.1 114320897 4270851 complement(1998353..2000044) 1 NC_008340.1 KEGG: gme:Gmet_1142 hypothetical protein; hypothetical protein 2000044 4270851 Mlg_1744 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742580.1 1998353 R 187272 CDS YP_742581.1 114320898 4270852 complement(2000041..2003001) 1 NC_008340.1 KEGG: gme:Gmet_1141 hypothetical protein; hypothetical protein 2003001 4270852 Mlg_1745 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742581.1 2000041 R 187272 CDS YP_742582.1 114320899 4270853 complement(2003003..2004184) 1 NC_008340.1 KEGG: gme:Gmet_1140 hypothetical protein; hypothetical protein 2004184 4270853 Mlg_1746 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742582.1 2003003 R 187272 CDS YP_742583.1 114320900 4270854 complement(2004184..2004570) 1 NC_008340.1 KEGG: gme:Gmet_1139 hypothetical protein; hypothetical protein 2004570 4270854 Mlg_1747 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742583.1 2004184 R 187272 CDS YP_742584.1 114320901 4270855 complement(2004578..2005405) 1 NC_008340.1 KEGG: gme:Gmet_1138 hypothetical protein; hypothetical protein 2005405 4270855 Mlg_1748 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742584.1 2004578 R 187272 CDS YP_742585.1 114320902 4270856 complement(2005454..2006608) 1 NC_008340.1 KEGG: gme:Gmet_1137 hypothetical protein; hypothetical protein 2006608 4270856 Mlg_1749 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742585.1 2005454 R 187272 CDS YP_742586.1 114320903 4268810 complement(2006612..2006911) 1 NC_008340.1 KEGG: gme:Gmet_1136 hypothetical protein; hypothetical protein 2006911 4268810 Mlg_1750 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742586.1 2006612 R 187272 CDS YP_742587.1 114320904 4268811 complement(2006911..2007558) 1 NC_008340.1 KEGG: gme:Gmet_1135 hypothetical protein; hypothetical protein 2007558 4268811 Mlg_1751 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742587.1 2006911 R 187272 CDS YP_742588.1 114320905 4268812 complement(2007561..2007791) 1 NC_008340.1 hypothetical protein 2007791 4268812 Mlg_1752 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742588.1 2007561 R 187272 CDS YP_742589.1 114320906 4268813 complement(2007784..2009136) 1 NC_008340.1 PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; KEGG: gme:Gmet_1133 AAA ATPase, central region; ATPase central domain-containing protein 2009136 4268813 Mlg_1753 Alkalilimnicola ehrlichii MLHE-1 ATPase central domain-containing protein YP_742589.1 2007784 R 187272 CDS YP_742590.1 114320907 4268814 complement(2009133..2010146) 1 NC_008340.1 KEGG: gme:Gmet_1132 hypothetical protein; hypothetical protein 2010146 4268814 Mlg_1754 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742590.1 2009133 R 187272 CDS YP_742591.1 114320908 4268815 complement(2010149..2011201) 1 NC_008340.1 KEGG: ani:AN5649.2 hypothetical protein; hypothetical protein 2011201 4268815 Mlg_1755 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742591.1 2010149 R 187272 CDS YP_742592.1 114320909 4268816 complement(2011221..2012012) 1 NC_008340.1 KEGG: gme:Gmet_1130 hypothetical protein; hypothetical protein 2012012 4268816 Mlg_1756 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742592.1 2011221 R 187272 CDS YP_742593.1 114320910 4268817 complement(2012048..2012557) 1 NC_008340.1 TIGRFAM: conserved hypothetical phage tail protein; KEGG: gme:Gmet_1129 hypothetical protein; phage tail protein 2012557 4268817 Mlg_1757 Alkalilimnicola ehrlichii MLHE-1 phage tail protein YP_742593.1 2012048 R 187272 CDS YP_742594.1 114320911 4268818 complement(2012570..2014144) 1 NC_008340.1 PFAM: phage tail sheath protein; KEGG: gme:Gmet_1128 phage tail sheath protein; phage tail sheath protein 2014144 4268818 Mlg_1758 Alkalilimnicola ehrlichii MLHE-1 phage tail sheath protein YP_742594.1 2012570 R 187272 CDS YP_742595.1 114320912 4268819 complement(2014669..2015565) 1 NC_008340.1 PFAM: UbiA prenyltransferase; KEGG: cps:CPS_4233 UbiA prenyltransferase; UbiA prenyltransferase 2015565 4268819 Mlg_1759 Alkalilimnicola ehrlichii MLHE-1 UbiA prenyltransferase YP_742595.1 2014669 R 187272 CDS YP_742596.1 114320913 4268820 2015634..2016389 1 NC_008340.1 KEGG: ilo:IL2350 predicted permease; permease 2016389 4268820 Mlg_1760 Alkalilimnicola ehrlichii MLHE-1 permease YP_742596.1 2015634 D 187272 CDS YP_742597.1 114320914 4268821 complement(2016386..2017516) 1 NC_008340.1 PFAM: Patatin; KEGG: nmu:Nmul_A2472 patatin; patatin 2017516 4268821 Mlg_1761 Alkalilimnicola ehrlichii MLHE-1 patatin YP_742597.1 2016386 R 187272 CDS YP_742598.1 114320915 4268822 complement(2017553..2018365) 1 NC_008340.1 KEGG: rsp:RSP_3760 hypothetical protein; hypothetical protein 2018365 4268822 Mlg_1762 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742598.1 2017553 R 187272 CDS YP_742599.1 114320916 4268823 2018555..2020336 1 NC_008340.1 KEGG: pfl:PFL_3832 hypothetical protein; hypothetical protein 2020336 4268823 Mlg_1763 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742599.1 2018555 D 187272 CDS YP_742600.1 114320917 4268824 complement(2020351..2020764) 1 NC_008340.1 PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: nmu:Nmul_A0938 GreA/GreB family elongation factor; GreA/GreB family elongation factor 2020764 4268824 Mlg_1764 Alkalilimnicola ehrlichii MLHE-1 GreA/GreB family elongation factor YP_742600.1 2020351 R 187272 CDS YP_742601.1 114320918 4268825 complement(2020923..2021477) 1 NC_008340.1 KEGG: hch:HCH_04531 hypothetical protein; hypothetical protein 2021477 4268825 Mlg_1765 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742601.1 2020923 R 187272 CDS YP_742602.1 114320919 4268826 complement(2021579..2022223) 1 NC_008340.1 hypothetical protein 2022223 4268826 Mlg_1766 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742602.1 2021579 R 187272 CDS YP_742603.1 114320920 4268827 2022462..2023337 1 NC_008340.1 KEGG: par:Psyc_1159 hypothetical protein; hypothetical protein 2023337 4268827 Mlg_1767 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742603.1 2022462 D 187272 CDS YP_742604.1 114320921 4269154 complement(2023410..2024855) 1 NC_008340.1 PFAM: Gluconate transporter; Citrate transporter; KEGG: pcr:Pcryo_1595 GntP family transporter; citrate transporter 2024855 4269154 Mlg_1768 Alkalilimnicola ehrlichii MLHE-1 citrate transporter YP_742604.1 2023410 R 187272 CDS YP_742605.1 114320922 4269155 complement(2024860..2025942) 1 NC_008340.1 PFAM: Patatin; KEGG: mlo:mll3840 hypothetical protein; patatin 2025942 4269155 Mlg_1769 Alkalilimnicola ehrlichii MLHE-1 patatin YP_742605.1 2024860 R 187272 CDS YP_742606.1 114320923 4269156 2026202..2026411 1 NC_008340.1 KEGG: ilo:IL2353 predicted membrane protein; membrane protein 2026411 4269156 Mlg_1770 Alkalilimnicola ehrlichii MLHE-1 membrane protein YP_742606.1 2026202 D 187272 CDS YP_742607.1 114320924 4269157 complement(2026435..2027709) 1 NC_008340.1 transaminase C; catalyzes transamination of alanine, valine, and 2-aminobutyrate with their respective 2-keto acids; also catalyzes terminal step in valine biosynthesis; valine--pyruvate transaminase 2027709 avtA 4269157 avtA Alkalilimnicola ehrlichii MLHE-1 valine--pyruvate transaminase YP_742607.1 2026435 R 187272 CDS YP_742608.1 114320925 4269158 2027904..2029661 1 NC_008340.1 PFAM: CBS domain containing protein; Cl- channel, voltage-gated family protein; KEGG: rru:Rru_A1534 Cl-channel, voltage gated; Cl- channel, voltage-gated family protein 2029661 4269158 Mlg_1772 Alkalilimnicola ehrlichii MLHE-1 Cl- channel, voltage-gated family protein YP_742608.1 2027904 D 187272 CDS YP_742609.1 114320926 4269159 2029648..2030781 1 NC_008340.1 KEGG: rsp:RSP_0161 spermidine/putrescine-binding periplasmic protein; spermidine/putrescine-binding periplasmic protein 2030781 4269159 Mlg_1773 Alkalilimnicola ehrlichii MLHE-1 spermidine/putrescine-binding periplasmic protein YP_742609.1 2029648 D 187272 CDS YP_742610.1 114320927 4269160 2030939..2031988 1 NC_008340.1 PFAM: fatty acid desaturase; KEGG: nha:Nham_2541 fatty acid desaturase; fatty acid desaturase 2031988 4269160 Mlg_1774 Alkalilimnicola ehrlichii MLHE-1 fatty acid desaturase YP_742610.1 2030939 D 187272 CDS YP_742611.1 114320928 4269161 complement(2032076..2032669) 1 NC_008340.1 PFAM: GCN5-related N-acetyltransferase; KEGG: jan:Jann_3674 acetyltransferase, GNAT family; GCN5-like N-acetyltransferase 2032669 4269161 Mlg_1775 Alkalilimnicola ehrlichii MLHE-1 GCN5-like N-acetyltransferase YP_742611.1 2032076 R 187272 CDS YP_742612.1 114320929 4269162 2032852..2033193 1 NC_008340.1 PFAM: regulatory protein, ArsR; KEGG: mfa:Mfla_2614 transcriptional regulator, ArsR family; ArsR family transcriptional regulator 2033193 4269162 Mlg_1776 Alkalilimnicola ehrlichii MLHE-1 ArsR family transcriptional regulator YP_742612.1 2032852 D 187272 CDS YP_742613.1 114320930 4269163 2033207..2033554 1 NC_008340.1 KEGG: mfa:Mfla_2613 hypothetical protein; hypothetical protein 2033554 4269163 Mlg_1777 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742613.1 2033207 D 187272 CDS YP_742614.1 114320931 4269164 complement(2033631..2034053) 1 NC_008340.1 PFAM: glutathione-dependent formaldehyde-activating, GFA; KEGG: ava:Ava_B0058 glutathione-dependent formaldehyde-activating, GFA; glutathione-dependent formaldehyde-activating, GFA 2034053 4269164 Mlg_1778 Alkalilimnicola ehrlichii MLHE-1 glutathione-dependent formaldehyde-activating, GFA YP_742614.1 2033631 R 187272 CDS YP_742615.1 114320932 4269165 complement(2034143..2034598) 1 NC_008340.1 KEGG: par:Psyc_1673 hypothetical protein; hypothetical protein 2034598 4269165 Mlg_1779 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742615.1 2034143 R 187272 CDS YP_742616.1 114320933 4269166 complement(2034810..2035499) 1 NC_008340.1 KEGG: tbd:Tbd_2631 methionine sulfoxide reductase B; TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; methionine-R-sulfoxide reductase 2035499 4269166 Mlg_1780 Alkalilimnicola ehrlichii MLHE-1 methionine-R-sulfoxide reductase YP_742616.1 2034810 R 187272 CDS YP_742617.1 114320934 4269169 complement(2036728..2038320) 1 NC_008340.1 PFAM: transposase IS66; KEGG: ppu:PP3985 ISPpu13, transposase Orf2; transposase IS66 2038320 4269169 Mlg_1783 Alkalilimnicola ehrlichii MLHE-1 transposase IS66 YP_742617.1 2036728 R 187272 CDS YP_742618.1 114320935 4269170 complement(2038365..2038721) 1 NC_008340.1 PFAM: IS66 Orf2 family protein; KEGG: rme:Rmet_1275 IS66 Orf2 like; IS66 Orf2 family protein 2038721 4269170 Mlg_1784 Alkalilimnicola ehrlichii MLHE-1 IS66 Orf2 family protein YP_742618.1 2038365 R 187272 CDS YP_742619.1 114320936 4268704 2039018..2040430 1 NC_008340.1 KEGG: rsp:RSP_2006 hypothetical protein; hypothetical protein 2040430 4268704 Mlg_1785 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742619.1 2039018 D 187272 CDS YP_742620.1 114320937 4268705 complement(2040448..2040711) 1 NC_008340.1 TIGRFAM: addiction module toxin, Txe/YoeB family; addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; Addiction module toxin, Txe/YoeB; KEGG: eba:ebD102 hypothetical protein; addiction module antitoxin 2040711 4268705 Mlg_1786 Alkalilimnicola ehrlichii MLHE-1 addiction module antitoxin YP_742620.1 2040448 R 187272 CDS YP_742621.1 114320938 4268706 complement(2040708..2040950) 1 NC_008340.1 TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: eba:ebD103 antitoxin of toxin-antitoxin stability system; prevent-host-death family protein 2040950 4268706 Mlg_1787 Alkalilimnicola ehrlichii MLHE-1 prevent-host-death family protein YP_742621.1 2040708 R 187272 CDS YP_742622.1 114320939 4268707 complement(2041007..2041237) 1 NC_008340.1 hypothetical protein 2041237 4268707 Mlg_1788 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742622.1 2041007 R 187272 CDS YP_742623.1 114320940 4268708 complement(2041304..2044393) 1 NC_008340.1 PFAM: type III restriction enzyme, res subunit; protein of unknown function DUF450; SMART: DEAD/DEAH box helicase domain protein; KEGG: mfa:Mfla_2607 protein of unknown function DUF450; type III restriction enzyme, res subunit 2044393 4268708 Mlg_1789 Alkalilimnicola ehrlichii MLHE-1 type III restriction enzyme, res subunit YP_742623.1 2041304 R 187272 CDS YP_742624.1 114320941 4268709 complement(2044397..2045008) 1 NC_008340.1 hypothetical protein 2045008 4268709 Mlg_1790 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742624.1 2044397 R 187272 CDS YP_742625.1 114320942 4268710 complement(2045005..2046264) 1 NC_008340.1 PFAM: restriction modification system DNA specificity domain; KEGG: ilo:IL0643 restriction endonuclease S subunit; restriction modification system DNA specificity subunit 2046264 4268710 Mlg_1791 Alkalilimnicola ehrlichii MLHE-1 restriction modification system DNA specificity subunit YP_742625.1 2045005 R 187272 CDS YP_742626.1 114320943 4268711 complement(2046261..2048438) 1 NC_008340.1 PFAM: N-6 DNA methylase; KEGG: mfa:Mfla_2604 N-6 DNA methylase; N-6 DNA methylase 2048438 4268711 Mlg_1792 Alkalilimnicola ehrlichii MLHE-1 N-6 DNA methylase YP_742626.1 2046261 R 187272 CDS YP_742627.1 114320944 4268712 complement(2048598..2049212) 1 NC_008340.1 PFAM: protein of unknown function DUF867; KEGG: sha:SH2068 hypothetical protein; hypothetical protein 2049212 4268712 Mlg_1793 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742627.1 2048598 R 187272 CDS YP_742628.1 114320945 4268713 2049763..2050062 1 NC_008340.1 hypothetical protein 2050062 4268713 Mlg_1794 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742628.1 2049763 D 187272 CDS YP_742629.1 114320946 4268714 complement(2050278..2051126) 1 NC_008340.1 KEGG: xcv:XCV0216 hypothetical protein; hypothetical protein 2051126 4268714 Mlg_1795 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742629.1 2050278 R 187272 CDS YP_742630.1 114320947 4268715 complement(2051261..2051893) 1 NC_008340.1 KEGG: pcr:Pcryo_2512 hypothetical protein; hypothetical protein 2051893 4268715 Mlg_1796 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742630.1 2051261 R 187272 CDS YP_742631.1 114320948 4268716 complement(2051890..2053017) 1 NC_008340.1 KEGG: sth:STH2171 hypothetical protein; hypothetical protein 2053017 4268716 Mlg_1797 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742631.1 2051890 R 187272 CDS YP_742632.1 114320949 4268717 complement(2053054..2054343) 1 NC_008340.1 PFAM: transposase; KEGG: eba:p2A174 transposase; transposase 2054343 4268717 Mlg_1798 Alkalilimnicola ehrlichii MLHE-1 transposase YP_742632.1 2053054 R 187272 CDS YP_742633.1 114320950 4268718 2054591..2055979 1 NC_008340.1 TIGRFAM: integron integrase; PFAM: phage integrase; KEGG: gme:Gmet_3006 integron integrase; integron integrase 2055979 4268718 Mlg_1799 Alkalilimnicola ehrlichii MLHE-1 integron integrase YP_742633.1 2054591 D 187272 CDS YP_742634.1 114320951 4268719 2056294..2059794 1 NC_008340.1 TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; KEGG: noc:Noc_1642 transcription-repair coupling factor; transcription-repair coupling factor 2059794 4268719 Mlg_1800 Alkalilimnicola ehrlichii MLHE-1 transcription-repair coupling factor YP_742634.1 2056294 D 187272 CDS YP_742635.1 114320952 4268720 2059873..2060541 1 NC_008340.1 KEGG: cbu:CBU_1073 hypothetical protein; hypothetical protein 2060541 4268720 Mlg_1801 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742635.1 2059873 D 187272 CDS YP_742636.1 114320953 4268721 2060677..2062047 1 NC_008340.1 PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: dvu:DVU2677 sensor histidine kinase/response regulator; GAF sensor signal transduction histidine kinase 2062047 4268721 Mlg_1802 Alkalilimnicola ehrlichii MLHE-1 GAF sensor signal transduction histidine kinase YP_742636.1 2060677 D 187272 CDS YP_742637.1 114320954 4269465 2062044..2062436 1 NC_008340.1 PFAM: response regulator receiver; KEGG: bja:bll7479 two-component response regulator; response regulator receiver protein 2062436 4269465 Mlg_1803 Alkalilimnicola ehrlichii MLHE-1 response regulator receiver protein YP_742637.1 2062044 D 187272 CDS YP_742638.1 114320955 4269466 complement(2062765..2064264) 1 NC_008340.1 TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase, class II (D, K and N); nucleic acid binding, OB-fold, tRNA/helicase-type; KEGG: mca:MCA0301 lysyl-tRNA synthetase; lysyl-tRNA synthetase 2064264 4269466 Mlg_1804 Alkalilimnicola ehrlichii MLHE-1 lysyl-tRNA synthetase YP_742638.1 2062765 R 187272 CDS YP_742639.1 114320956 4269467 complement(2064360..2065424) 1 NC_008340.1 TIGRFAM: peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: stm:STM3041c peptide chain release factor 2; peptide chain release factor 2 2065424 4269467 Mlg_1805 Alkalilimnicola ehrlichii MLHE-1 peptide chain release factor 2 YP_742639.1 2064360 R 187272 CDS YP_742640.1 114320957 4269468 complement(2065546..2066421) 1 NC_008340.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: pae:PA3177 hypothetical protein; diguanylate cyclase 2066421 4269468 Mlg_1806 Alkalilimnicola ehrlichii MLHE-1 diguanylate cyclase YP_742640.1 2065546 R 187272 CDS YP_742641.1 114320958 4269469 2066700..2067905 1 NC_008340.1 KEGG: psb:Psyr_3394 hypothetical protein; hypothetical protein 2067905 4269469 Mlg_1807 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742641.1 2066700 D 187272 CDS YP_742642.1 114320959 4269470 2067910..2068269 1 NC_008340.1 KEGG: hch:HCH_04371 uncharacterized flagellar protein FhlB cytoplasmic domain; flagellar protein FhlB-like protein 2068269 4269470 Mlg_1808 Alkalilimnicola ehrlichii MLHE-1 flagellar protein FhlB-like protein YP_742642.1 2067910 D 187272 CDS YP_742643.1 114320960 4269471 complement(2068288..2068704) 1 NC_008340.1 KEGG: noc:Noc_2154 hypothetical protein; hypothetical protein 2068704 4269471 Mlg_1809 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742643.1 2068288 R 187272 CDS YP_742644.1 114320961 4269472 complement(2068708..2070165) 1 NC_008340.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 2070165 cysS 4269472 cysS Alkalilimnicola ehrlichii MLHE-1 cysteinyl-tRNA synthetase YP_742644.1 2068708 R 187272 CDS YP_742645.1 114320962 4269473 complement(2070162..2071595) 1 NC_008340.1 TIGRFAM: glutamyl-tRNA synthetase; PFAM: glutamyl-tRNA synthetase, class Ic; KEGG: noc:Noc_2250 glutamyl-tRNA synthetase; glutamate--tRNA(Gln) ligase/glutamyl-tRNA synthetase 2071595 4269473 Mlg_1811 Alkalilimnicola ehrlichii MLHE-1 glutamate--tRNA(Gln) ligase/glutamyl-tRNA synthetase YP_742645.1 2070162 R 187272 CDS YP_742646.1 114320963 4269474 2071724..2072476 1 NC_008340.1 TIGRFAM: UDP-2,3-diacylglucosamine hydrolase; PFAM: metallophosphoesterase; KEGG: xac:XAC1036 UDP-2,3-diacylglucosamine hydrolase; UDP-2,3-diacylglucosamine hydrolase 2072476 4269474 Mlg_1812 Alkalilimnicola ehrlichii MLHE-1 UDP-2,3-diacylglucosamine hydrolase YP_742646.1 2071724 D 187272 CDS YP_742647.1 114320964 4269475 2072479..2073306 1 NC_008340.1 TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: mag:amb3197 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; phosphomethylpyrimidine kinase 2073306 4269475 Mlg_1813 Alkalilimnicola ehrlichii MLHE-1 phosphomethylpyrimidine kinase YP_742647.1 2072479 D 187272 CDS YP_742648.1 114320965 4269476 complement(2073376..2073825) 1 NC_008340.1 PFAM: protein of unknown function DUF461; KEGG: dar:Daro_1578 protein of unknown function DUF461; hypothetical protein 2073825 4269476 Mlg_1814 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742648.1 2073376 R 187272 CDS YP_742649.1 114320966 4269477 complement(2073865..2074488) 1 NC_008340.1 PFAM: electron transport protein SCO1/SenC; KEGG: tcx:Tcr_1565 electron transport protein SCO1/SenC; electron transport protein SCO1/SenC 2074488 4269477 Mlg_1815 Alkalilimnicola ehrlichii MLHE-1 electron transport protein SCO1/SenC YP_742649.1 2073865 R 187272 CDS YP_742650.1 114320967 4269478 complement(2074492..2075010) 1 NC_008340.1 KEGG: dar:Daro_1576 hypothetical protein; hypothetical protein 2075010 4269478 Mlg_1816 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742650.1 2074492 R 187272 CDS YP_742651.1 114320968 4269479 complement(2075519..2075707) 1 NC_008340.1 hypothetical protein 2075707 4269479 Mlg_1817 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742651.1 2075519 R 187272 CDS YP_742652.1 114320969 4269480 complement(2076905..2077594) 1 NC_008340.1 PFAM: peptidase, membrane zinc metallopeptidase, KEGG: tcx:Tcr_1976 hypothetical protein; peptidase, membrane zinc metallopeptidase 2077594 4269480 Mlg_1818 Alkalilimnicola ehrlichii MLHE-1 peptidase, membrane zinc metallopeptidase YP_742652.1 2076905 R 187272 CDS YP_742653.1 114320970 4269481 complement(2077610..2079343) 1 NC_008340.1 TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase, RecJ domain protein; phosphoesterase, DHHA1; KEGG: pae:PA3725 single-stranded-DNA-specific exonuclease RecJ; single-stranded-DNA-specific exonuclease RecJ 2079343 4269481 Mlg_1819 Alkalilimnicola ehrlichii MLHE-1 single-stranded-DNA-specific exonuclease RecJ YP_742653.1 2077610 R 187272 CDS YP_742654.1 114320971 4268175 complement(2079412..2080431) 1 NC_008340.1 KEGG: cvi:CV2476 probable signal peptide protein; signal peptide protein 2080431 4268175 Mlg_1820 Alkalilimnicola ehrlichii MLHE-1 signal peptide protein YP_742654.1 2079412 R 187272 CDS YP_742655.1 114320972 4268176 complement(2080443..2081579) 1 NC_008340.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 2081579 4268176 Mlg_1821 Alkalilimnicola ehrlichii MLHE-1 threonine synthase YP_742655.1 2080443 R 187272 CDS YP_742656.1 114320973 4268177 complement(2081602..2082915) 1 NC_008340.1 catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 2082915 4268177 Mlg_1822 Alkalilimnicola ehrlichii MLHE-1 homoserine dehydrogenase YP_742656.1 2081602 R 187272 CDS YP_742657.1 114320974 4268178 complement(2082912..2084135) 1 NC_008340.1 PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase, class I and II; KEGG: tcx:Tcr_1252 aminotransferase, class I and II; aminotransferase 2084135 4268178 Mlg_1823 Alkalilimnicola ehrlichii MLHE-1 aminotransferase YP_742657.1 2082912 R 187272 CDS YP_742658.1 114320975 4268179 2084347..2084721 1 NC_008340.1 PFAM: protein of unknown function DUF498; KEGG: cbu:CBU_0859 hypothetical protein; hypothetical protein 2084721 4268179 Mlg_1824 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742658.1 2084347 D 187272 CDS YP_742659.1 114320976 4268180 complement(2084825..2085853) 1 NC_008340.1 TIGRFAM: RNA polymerase sigma factor RpoS; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; KEGG: pae:PA3622 sigma factor RpoS; RNA polymerase, sigma 28 subunit 2085853 4268180 Mlg_1825 Alkalilimnicola ehrlichii MLHE-1 RNA polymerase, sigma 28 subunit YP_742659.1 2084825 R 187272 CDS YP_742660.1 114320977 4268181 complement(2086057..2086851) 1 NC_008340.1 PFAM: Peptidoglycan-binding LysM; peptidase M23B; KEGG: bte:BTH_I2225 lipoprotein NlpD; peptidase M23B 2086851 4268181 Mlg_1826 Alkalilimnicola ehrlichii MLHE-1 peptidase M23B YP_742660.1 2086057 R 187272 CDS YP_742661.1 114320978 4268182 complement(2086848..2087429) 1 NC_008340.1 KEGG: ilo:IL0747 hypothetical protein; hypothetical protein 2087429 4268182 Mlg_1827 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742661.1 2086848 R 187272 CDS YP_742662.1 114320979 4268183 complement(2087429..2088094) 1 NC_008340.1 KEGG: ppu:PP1621 protein-L-isoaspartate O-methyltransferase; TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate O-methyltransferase 2088094 4268183 Mlg_1828 Alkalilimnicola ehrlichii MLHE-1 protein-L-isoaspartate O-methyltransferase YP_742662.1 2087429 R 187272 CDS YP_742663.1 114320980 4268184 complement(2088096..2088869) 1 NC_008340.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 2088869 surE 4268184 surE Alkalilimnicola ehrlichii MLHE-1 stationary phase survival protein SurE YP_742663.1 2088096 R 187272 CDS YP_742664.1 114320981 4268185 2088951..2089487 1 NC_008340.1 PFAM: Smr protein/MutS2; KEGG: noc:Noc_1906 Smr protein/MutS2-like; Smr protein/MutS2 2089487 4268185 Mlg_1830 Alkalilimnicola ehrlichii MLHE-1 Smr protein/MutS2 YP_742664.1 2088951 D 187272 CDS YP_742665.1 114320982 4268186 complement(2089431..2090381) 1 NC_008340.1 KEGG: noc:Noc_2021 PAS sensor diguanylate cyclase/phophodiesterase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase 2090381 4268186 Mlg_1831 Alkalilimnicola ehrlichii MLHE-1 PAS/PAC sensor-containing diguanylate cyclase YP_742665.1 2089431 R 187272 CDS YP_742666.1 114320983 4268187 complement(2090437..2091063) 1 NC_008340.1 PFAM: regulatory protein, LuxR; response regulator receiver; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: hch:HCH_05220 response regulator; LuxR family transcriptional regulator 2091063 4268187 Mlg_1832 Alkalilimnicola ehrlichii MLHE-1 LuxR family transcriptional regulator YP_742666.1 2090437 R 187272 CDS YP_742667.1 114320984 4268188 complement(2091232..2093295) 1 NC_008340.1 KEGG: mag:amb3291 signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor signal transduction histidine kinase 2093295 4268188 Mlg_1833 Alkalilimnicola ehrlichii MLHE-1 PAS/PAC sensor signal transduction histidine kinase YP_742667.1 2091232 R 187272 CDS YP_742668.1 114320985 4268189 complement(2093292..2093978) 1 NC_008340.1 PFAM: regulatory protein, LuxR; Sigma-70, region 4 type 2; KEGG: sme:SMa1686 two-component response regulator; LuxR family transcriptional regulator 2093978 4268189 Mlg_1834 Alkalilimnicola ehrlichii MLHE-1 LuxR family transcriptional regulator YP_742668.1 2093292 R 187272 CDS YP_742669.1 114320986 4268190 complement(2094075..2095106) 1 NC_008340.1 catalyzes the modification of U13 in tRNA(Glu); tRNA pseudouridine synthase D 2095106 truD 4268190 truD Alkalilimnicola ehrlichii MLHE-1 tRNA pseudouridine synthase D YP_742669.1 2094075 R 187272 CDS YP_742670.1 114320987 4268191 complement(2095096..2095590) 1 NC_008340.1 KEGG: mca:MCA2518 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: MECDP-synthase; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2095590 4268191 Mlg_1836 Alkalilimnicola ehrlichii MLHE-1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_742670.1 2095096 R 187272 CDS YP_742671.1 114320988 4268192 complement(2095640..2096347) 1 NC_008340.1 TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: noc:Noc_0854 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2096347 4268192 Mlg_1837 Alkalilimnicola ehrlichii MLHE-1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_742671.1 2095640 R 187272 CDS YP_742672.1 114320989 4269206 complement(2096344..2096631) 1 NC_008340.1 PFAM: Septum formation initiator; KEGG: noc:Noc_0853 septum formation initiator; cell division protein FtsB 2096631 4269206 Mlg_1838 Alkalilimnicola ehrlichii MLHE-1 cell division protein FtsB YP_742672.1 2096344 R 187272 CDS YP_742673.1 114320990 4269207 complement(2096659..2097948) 1 NC_008340.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 2097948 eno 4269207 eno Alkalilimnicola ehrlichii MLHE-1 phosphopyruvate hydratase YP_742673.1 2096659 R 187272 CDS YP_742674.1 114320991 4269208 complement(2098001..2098834) 1 NC_008340.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 2098834 4269208 Mlg_1840 Alkalilimnicola ehrlichii MLHE-1 2-dehydro-3-deoxyphosphooctonate aldolase YP_742674.1 2098001 R 187272 CDS YP_742675.1 114320992 4269209 complement(2098888..2100510) 1 NC_008340.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 2100510 pyrG 4269209 pyrG Alkalilimnicola ehrlichii MLHE-1 CTP synthetase YP_742675.1 2098888 R 187272 CDS YP_742676.1 114320993 4269210 complement(2100798..2102135) 1 NC_008340.1 TIGRFAM: tRNA(Ile)-lysidine synthetase; tRNA(Ile)-lysidine synthetase-like; PFAM: PP-loop domain protein; KEGG: noc:Noc_0849 tRNA(Ile)-lysidine synthase; tRNA(Ile)-lysidine synthetase 2102135 4269210 Mlg_1842 Alkalilimnicola ehrlichii MLHE-1 tRNA(Ile)-lysidine synthetase YP_742676.1 2100798 R 187272 CDS YP_742677.1 114320994 4269211 complement(2102163..2103119) 1 NC_008340.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha 2103119 4269211 Mlg_1843 Alkalilimnicola ehrlichii MLHE-1 acetyl-CoA carboxylase carboxyltransferase subunit alpha YP_742677.1 2102163 R 187272 CDS YP_742678.1 114320995 4269212 complement(2103212..2103793) 1 NC_008340.1 PFAM: type IV pilus assembly PilZ; KEGG: sde:Sde_3217 modification methylase HemK; type IV pilus assembly PilZ 2103793 4269212 Mlg_1844 Alkalilimnicola ehrlichii MLHE-1 type IV pilus assembly PilZ YP_742678.1 2103212 R 187272 CDS YP_742679.1 114320996 4269213 complement(2103874..2104680) 1 NC_008340.1 TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: syn:slr1753 hypothetical protein; TonB family protein 2104680 4269213 Mlg_1845 Alkalilimnicola ehrlichii MLHE-1 TonB family protein YP_742679.1 2103874 R 187272 CDS YP_742680.1 114320997 4269214 complement(2104677..2105081) 1 NC_008340.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: cyb:CYB_0820 proton transporter, ExbD/TolR family; biopolymer transport protein ExbD/TolR 2105081 4269214 Mlg_1846 Alkalilimnicola ehrlichii MLHE-1 biopolymer transport protein ExbD/TolR YP_742680.1 2104677 R 187272 CDS YP_742681.1 114320998 4269215 complement(2105086..2105478) 1 NC_008340.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: sde:Sde_2060 GTP cyclohydrolase I; biopolymer transport protein ExbD/TolR 2105478 4269215 Mlg_1847 Alkalilimnicola ehrlichii MLHE-1 biopolymer transport protein ExbD/TolR YP_742681.1 2105086 R 187272 CDS YP_742682.1 114320999 4269216 complement(2105468..2106187) 1 NC_008340.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: jan:Jann_2130 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 2106187 4269216 Mlg_1848 Alkalilimnicola ehrlichii MLHE-1 MotA/TolQ/ExbB proton channel YP_742682.1 2105468 R 187272 CDS YP_742683.1 114321000 4269217 complement(2106288..2109836) 1 NC_008340.1 KEGG: mca:MCA1286 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP C-terminal domain protein; nucleic acid binding, OB-fold, tRNA/helicase-type; DNA polymerase III subunit alpha 2109836 4269217 Mlg_1849 Alkalilimnicola ehrlichii MLHE-1 DNA polymerase III subunit alpha YP_742683.1 2106288 R 187272 CDS YP_742684.1 114321001 4269218 complement(2110027..2110623) 1 NC_008340.1 PFAM: ribonuclease HII/HIII; KEGG: sdy:SDY_0199 RNAse HII; RNase HII 2110623 4269218 Mlg_1850 Alkalilimnicola ehrlichii MLHE-1 RNase HII YP_742684.1 2110027 R 187272 CDS YP_742685.1 114321002 4269219 complement(2110632..2111780) 1 NC_008340.1 catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; lipid-A-disaccharide synthase 2111780 lpxB 4269219 lpxB Alkalilimnicola ehrlichii MLHE-1 lipid-A-disaccharide synthase YP_742685.1 2110632 R 187272 CDS YP_742686.1 114321003 4269220 complement(2111795..2112571) 1 NC_008340.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase 2112571 4269220 Mlg_1852 Alkalilimnicola ehrlichii MLHE-1 UDP-N-acetylglucosamine acyltransferase YP_742686.1 2111795 R 187272 CDS YP_742687.1 114321004 4269221 complement(2112568..2113035) 1 NC_008340.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 2113035 fabZ 4269221 fabZ Alkalilimnicola ehrlichii MLHE-1 (3R)-hydroxymyristoyl-ACP dehydratase YP_742687.1 2112568 R 187272 CDS YP_742688.1 114321005 4269222 complement(2113133..2113663) 1 NC_008340.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: mca:MCA2446 outer membrane protein OmpH; outer membrane chaperone Skp 2113663 4269222 Mlg_1854 Alkalilimnicola ehrlichii MLHE-1 outer membrane chaperone Skp YP_742688.1 2113133 R 187272 CDS YP_742689.1 114321006 4268073 complement(2113688..2116087) 1 NC_008340.1 PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: noc:Noc_0816 outer membrane protein; surface antigen (D15) 2116087 4268073 Mlg_1855 Alkalilimnicola ehrlichii MLHE-1 surface antigen (D15) YP_742689.1 2113688 R 187272 CDS YP_742690.1 114321007 4268074 complement(2116112..2117476) 1 NC_008340.1 TIGRFAM: membrane-associated zinc metalloprotease; PFAM: PDZ/DHR/GLGF domain protein; peptidase M50; KEGG: noc:Noc_0815 peptidase M50, membrane-associated zinc metallopeptidase; peptidase RseP 2117476 4268074 Mlg_1856 Alkalilimnicola ehrlichii MLHE-1 peptidase RseP YP_742690.1 2116112 R 187272 CDS YP_742691.1 114321008 4268075 complement(2117483..2118688) 1 NC_008340.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2118688 4268075 Mlg_1857 Alkalilimnicola ehrlichii MLHE-1 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_742691.1 2117483 R 187272 CDS YP_742692.1 114321009 4268076 complement(2118667..2119497) 1 NC_008340.1 PFAM: phosphatidate cytidylyltransferase; KEGG: cbu:CBU_1381 phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase 2119497 4268076 Mlg_1858 Alkalilimnicola ehrlichii MLHE-1 phosphatidate cytidylyltransferase YP_742692.1 2118667 R 187272 CDS YP_742693.1 114321010 4268077 complement(2119490..2120263) 1 NC_008340.1 KEGG: mca:MCA0571 undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; undecaprenyl pyrophosphate synthetase 2120263 4268077 Mlg_1859 Alkalilimnicola ehrlichii MLHE-1 undecaprenyl pyrophosphate synthetase YP_742693.1 2119490 R 187272 CDS YP_742694.1 114321011 4268078 complement(2120403..2120960) 1 NC_008340.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 2120960 frr 4268078 frr Alkalilimnicola ehrlichii MLHE-1 ribosome recycling factor YP_742694.1 2120403 R 187272 CDS YP_742695.1 114321012 4268079 complement(2120957..2121685) 1 NC_008340.1 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 2121685 pyrH 4268079 pyrH Alkalilimnicola ehrlichii MLHE-1 uridylate kinase YP_742695.1 2120957 R 187272 CDS YP_742696.1 114321013 4268080 complement(2121761..2122639) 1 NC_008340.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 2122639 tsf 4268080 tsf Alkalilimnicola ehrlichii MLHE-1 elongation factor Ts YP_742696.1 2121761 R 187272 CDS YP_742697.1 114321014 4268081 complement(2122725..2123471) 1 NC_008340.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 2123471 rpsB 4268081 rpsB Alkalilimnicola ehrlichii MLHE-1 30S ribosomal protein S2 YP_742697.1 2122725 R 187272 CDS YP_742698.1 114321015 4268082 2123713..2124480 1 NC_008340.1 TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: pae:PA3657 methionine aminopeptidase; methionine aminopeptidase, type I 2124480 4268082 Mlg_1864 Alkalilimnicola ehrlichii MLHE-1 methionine aminopeptidase, type I YP_742698.1 2123713 D 187272 CDS YP_742699.1 114321016 4268083 2124484..2127168 1 NC_008340.1 KEGG: pae:PA3658 protein-PII uridylyltransferase; TIGRFAM: protein-P-II uridylyltransferase; PFAM: amino acid-binding ACT domain protein; DNA polymerase, beta domain protein region; metal-dependent phosphohydrolase, HD sub domain; GlnD PII-uridylyltransferase; SMART: metal-dependent phosphohydrolase, HD region; UTP-GlnB uridylyltransferase, GlnD 2127168 4268083 Mlg_1865 Alkalilimnicola ehrlichii MLHE-1 UTP-GlnB uridylyltransferase, GlnD YP_742699.1 2124484 D 187272 CDS YP_742700.1 114321017 4268084 2127165..2128355 1 NC_008340.1 catalyzes the formation of succinyldiaminopimelate from N-succinyl-2-amino-6-ketopimelate; succinyldiaminopimelate transaminase 2128355 4268084 Mlg_1866 Alkalilimnicola ehrlichii MLHE-1 succinyldiaminopimelate transaminase YP_742700.1 2127165 D 187272 CDS YP_742701.1 114321018 4268085 2128450..2129268 1 NC_008340.1 KEGG: mca:MCA1490 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; PFAM: transferase hexapeptide repeat containing protein; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 2129268 4268085 Mlg_1867 Alkalilimnicola ehrlichii MLHE-1 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase YP_742701.1 2128450 D 187272 CDS YP_742702.1 114321019 4268086 2129487..2130614 1 NC_008340.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 2130614 4268086 Mlg_1868 Alkalilimnicola ehrlichii MLHE-1 succinyl-diaminopimelate desuccinylase YP_742702.1 2129487 D 187272 CDS YP_742703.1 114321020 4268087 complement(2130671..2131273) 1 NC_008340.1 KEGG: sth:STH2141 alkaline phosphatase; alkaline phosphatase 2131273 4268087 Mlg_1869 Alkalilimnicola ehrlichii MLHE-1 alkaline phosphatase YP_742703.1 2130671 R 187272 CDS YP_742704.1 114321021 4268088 2131537..2133621 1 NC_008340.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 2133621 4268088 Mlg_1870 Alkalilimnicola ehrlichii MLHE-1 polyphosphate kinase YP_742704.1 2131537 D 187272 CDS YP_742705.1 114321022 4268089 complement(2133649..2135142) 1 NC_008340.1 PFAM: Ppx/GppA phosphatase; KEGG: noc:Noc_2394 exopolyphosphatase; Ppx/GppA phosphatase 2135142 4268089 Mlg_1871 Alkalilimnicola ehrlichii MLHE-1 Ppx/GppA phosphatase YP_742705.1 2133649 R 187272 CDS YP_742706.1 114321023 4268090 complement(2135146..2135655) 1 NC_008340.1 TIGRFAM: phosphohistidine phosphatase SixA; PFAM: Phosphoglycerate mutase; KEGG: gvi:gll1752 hypothetical protein; phosphohistidine phosphatase, SixA 2135655 4268090 Mlg_1872 Alkalilimnicola ehrlichii MLHE-1 phosphohistidine phosphatase, SixA YP_742706.1 2135146 R 187272 CDS YP_742707.1 114321024 4269728 complement(2135676..2137205) 1 NC_008340.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: xcv:XCV1477 signal transduction protein; diguanylate cyclase 2137205 4269728 Mlg_1873 Alkalilimnicola ehrlichii MLHE-1 diguanylate cyclase YP_742707.1 2135676 R 187272 CDS YP_742708.1 114321025 4269729 complement(2137273..2137506) 1 NC_008340.1 TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type; KEGG: pae:PA1548 hypothetical protein; cytochrome oxidase maturation protein, cbb3-type 2137506 4269729 Mlg_1874 Alkalilimnicola ehrlichii MLHE-1 cytochrome oxidase maturation protein, cbb3-type YP_742708.1 2137273 R 187272 CDS YP_742709.1 114321026 4269730 complement(2137510..2139990) 1 NC_008340.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: ppu:PP4261 cation-transporting P-type ATPase; heavy metal translocating P-type ATPase 2139990 4269730 Mlg_1875 Alkalilimnicola ehrlichii MLHE-1 heavy metal translocating P-type ATPase YP_742709.1 2137510 R 187272 CDS YP_742710.1 114321027 4269731 complement(2139993..2140550) 1 NC_008340.1 KEGG: pae:PA1550 hypothetical protein; hypothetical protein 2140550 4269731 Mlg_1876 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742710.1 2139993 R 187272 CDS YP_742711.1 114321028 4269732 complement(2140571..2141953) 1 NC_008340.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: tbd:Tbd_0639 probable iron-sulfur 4Fe-4S ferredoxin transmembrane protein; 4Fe-4S ferredoxin 2141953 4269732 Mlg_1877 Alkalilimnicola ehrlichii MLHE-1 4Fe-4S ferredoxin YP_742711.1 2140571 R 187272 CDS YP_742712.1 114321029 4269733 complement(2141964..2142281) 1 NC_008340.1 KEGG: eba:ebD128 hypothetical protein; hypothetical protein 2142281 4269733 Mlg_1878 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742712.1 2141964 R 187272 CDS YP_742713.1 114321030 4269734 complement(2142317..2143219) 1 NC_008340.1 TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; PFAM: cytochrome c, class I; KEGG: eba:ebA5134 cytochrome-cbb3 oxidase, subunit III; cytochrome c oxidase, cbb3-type, subunit III 2143219 4269734 Mlg_1879 Alkalilimnicola ehrlichii MLHE-1 cytochrome c oxidase, cbb3-type, subunit III YP_742713.1 2142317 R 187272 CDS YP_742714.1 114321031 4269735 complement(2143212..2143403) 1 NC_008340.1 PFAM: Cbb3-type cytochrome oxidase component; KEGG: par:Psyc_0776 probable cytochrome c, oxidase component; Cbb3-type cytochrome oxidase component 2143403 4269735 Mlg_1880 Alkalilimnicola ehrlichii MLHE-1 Cbb3-type cytochrome oxidase component YP_742714.1 2143212 R 187272 CDS YP_742715.1 114321032 4269736 complement(2143412..2144023) 1 NC_008340.1 TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; PFAM: cytochrome C oxidase, mono-heme subunit/FixO; KEGG: pae:PA1553 probable cytochrome c oxidase subunit; cytochrome c oxidase, cbb3-type, subunit II 2144023 4269736 Mlg_1881 Alkalilimnicola ehrlichii MLHE-1 cytochrome c oxidase, cbb3-type, subunit II YP_742715.1 2143412 R 187272 CDS YP_742716.1 114321033 4269737 complement(2144036..2145460) 1 NC_008340.1 CcoN; FixN; cbb3-type cytochrome c oxidase subunit I 2145460 4269737 Mlg_1882 Alkalilimnicola ehrlichii MLHE-1 cbb3-type cytochrome c oxidase subunit I YP_742716.1 2144036 R 187272 CDS YP_742717.1 114321034 4269738 2145716..2146636 1 NC_008340.1 PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; KEGG: mca:MCA0468 MoxR protein; ATPase 2146636 4269738 Mlg_1883 Alkalilimnicola ehrlichii MLHE-1 ATPase YP_742717.1 2145716 D 187272 CDS YP_742718.1 114321035 4269739 2146636..2147607 1 NC_008340.1 PFAM: protein of unknown function DUF58; KEGG: dar:Daro_2518 protein of unknown function DUF58; hypothetical protein 2147607 4269739 Mlg_1884 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742718.1 2146636 D 187272 CDS YP_742719.1 114321036 4269740 2147604..2149574 1 NC_008340.1 PFAM: transglutaminase domain protein; KEGG: dar:Daro_2519 transglutaminase-like; transglutaminase domain-containing protein 2149574 4269740 Mlg_1885 Alkalilimnicola ehrlichii MLHE-1 transglutaminase domain-containing protein YP_742719.1 2147604 D 187272 CDS YP_742720.1 114321037 4269741 2149603..2150310 1 NC_008340.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: neu:NE0371 glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase 2150310 4269741 Mlg_1886 Alkalilimnicola ehrlichii MLHE-1 glycerophosphoryl diester phosphodiesterase YP_742720.1 2149603 D 187272 CDS YP_742721.1 114321038 4269742 complement(2150382..2150858) 1 NC_008340.1 TIGRFAM: transcriptional regulator, Rrf2 family; iron-sulfur cluster assembly transcription factor IscR; PFAM: protein of unknown function UPF0074; KEGG: noc:Noc_1648 iron-sulphur cluster assembly transcription factor IscR; BadM/Rrf2 family transcriptional regulator 2150858 4269742 Mlg_1887 Alkalilimnicola ehrlichii MLHE-1 BadM/Rrf2 family transcriptional regulator YP_742721.1 2150382 R 187272 CDS YP_742722.1 114321039 4269743 complement(2150972..2151430) 1 NC_008340.1 PFAM: protein of unknown function DUF1249; KEGG: mca:MCA2528 hypothetical protein; hypothetical protein 2151430 4269743 Mlg_1888 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742722.1 2150972 R 187272 CDS YP_742723.1 114321040 4269744 complement(2151500..2152324) 1 NC_008340.1 PFAM: protein of unknown function DUF299; KEGG: pae:PA1769 hypothetical protein; hypothetical protein 2152324 4269744 Mlg_1889 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742723.1 2151500 R 187272 CDS YP_742724.1 114321041 4270090 2152373..2154820 1 NC_008340.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; phosphoenolpyruvate synthase 2154820 4270090 Mlg_1890 Alkalilimnicola ehrlichii MLHE-1 phosphoenolpyruvate synthase YP_742724.1 2152373 D 187272 CDS YP_742725.1 114321042 4270091 complement(2154888..2155937) 1 NC_008340.1 PFAM: porin, Gram-negative type; KEGG: tbd:Tbd_0448 outer membrane protein (porin); porin 2155937 4270091 Mlg_1891 Alkalilimnicola ehrlichii MLHE-1 porin YP_742725.1 2154888 R 187272 CDS YP_742726.1 114321043 4270092 complement(2156003..2158195) 1 NC_008340.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; PepSY-associated TM helix domain protein; flavodoxin/nitric oxide synthase; KEGG: bbr:BB3283 probable oxidoreductase; flavodoxin/nitric oxide synthase 2158195 4270092 Mlg_1892 Alkalilimnicola ehrlichii MLHE-1 flavodoxin/nitric oxide synthase YP_742726.1 2156003 R 187272 CDS YP_742727.1 114321044 4270093 complement(2158379..2158597) 1 NC_008340.1 hypothetical protein 2158597 4270093 Mlg_1893 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742727.1 2158379 R 187272 CDS YP_742728.1 114321045 4270094 2159300..2160802 1 NC_008340.1 PFAM: FAD linked oxidase domain protein; KEGG: psb:Psyr_3331 glycolate oxidase subunit GlcD; FAD linked oxidase domain-containing protein 2160802 4270094 Mlg_1894 Alkalilimnicola ehrlichii MLHE-1 FAD linked oxidase domain-containing protein YP_742728.1 2159300 D 187272 CDS YP_742729.1 114321046 4270095 2160815..2161879 1 NC_008340.1 PFAM: FAD linked oxidase domain protein; KEGG: csa:Csal_2688 FAD linked oxidase-like protein; glycolate oxidase FAD binding subunit 2161879 glcE 4270095 glcE Alkalilimnicola ehrlichii MLHE-1 glycolate oxidase FAD binding subunit YP_742729.1 2160815 D 187272 CDS YP_742730.1 114321047 4270096 2161887..2163101 1 NC_008340.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: noc:Noc_0841 hypothetical protein; glycolate oxidase iron-sulfur subunit 2163101 glcF 4270096 glcF Alkalilimnicola ehrlichii MLHE-1 glycolate oxidase iron-sulfur subunit YP_742730.1 2161887 D 187272 CDS YP_742731.1 114321048 4270097 2163203..2164024 1 NC_008340.1 PFAM: Rhodanese domain protein; KEGG: noc:Noc_0191 thiosulfate sulfurtransferase; thiosulfate sulfurtransferase 2164024 4270097 Mlg_1897 Alkalilimnicola ehrlichii MLHE-1 thiosulfate sulfurtransferase YP_742731.1 2163203 D 187272 CDS YP_742732.1 114321049 4270098 complement(2164062..2164865) 1 NC_008340.1 PFAM: dihydrodipicolinate reductase; KEGG: pst:PSPTO4503 dihydrodipicolinate reductase; dihydrodipicolinate reductase 2164865 4270098 Mlg_1898 Alkalilimnicola ehrlichii MLHE-1 dihydrodipicolinate reductase YP_742732.1 2164062 R 187272 CDS YP_742733.1 114321050 4270099 complement(2164868..2166019) 1 NC_008340.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; molecular chaperone DnaJ 2166019 4270099 Mlg_1899 Alkalilimnicola ehrlichii MLHE-1 molecular chaperone DnaJ YP_742733.1 2164868 R 187272 CDS YP_742734.1 114321051 4270100 complement(2166125..2168140) 1 NC_008340.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 2168140 dnaK 4270100 dnaK Alkalilimnicola ehrlichii MLHE-1 molecular chaperone DnaK YP_742734.1 2166125 R 187272 CDS YP_742735.1 114321052 4270101 complement(2168204..2168860) 1 NC_008340.1 PFAM: GrpE protein; KEGG: noc:Noc_2812 GrpE protein; heat shock protein GrpE 2168860 4270101 Mlg_1901 Alkalilimnicola ehrlichii MLHE-1 heat shock protein GrpE YP_742735.1 2168204 R 187272 CDS YP_742736.1 114321053 4270102 complement(2168988..2170040) 1 NC_008340.1 TIGRFAM: heat-inducible transcription repressor HrcA; PFAM: Negative regulator of class I heat shock protein; KEGG: noc:Noc_2813 negative regulator of class I heat shock protein; heat-inducible transcription repressor HrcA 2170040 4270102 Mlg_1902 Alkalilimnicola ehrlichii MLHE-1 heat-inducible transcription repressor HrcA YP_742736.1 2168988 R 187272 CDS YP_742737.1 114321054 4270103 2170445..2171338 1 NC_008340.1 catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase 2171338 ppnK 4270103 ppnK Alkalilimnicola ehrlichii MLHE-1 inorganic polyphosphate/ATP-NAD kinase YP_742737.1 2170445 D 187272 CDS YP_742738.1 114321055 4270104 2171472..2173166 1 NC_008340.1 TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: pst:PSPTO4507 DNA repair protein RecN; DNA repair protein RecN 2173166 4270104 Mlg_1904 Alkalilimnicola ehrlichii MLHE-1 DNA repair protein RecN YP_742738.1 2171472 D 187272 CDS YP_742739.1 114321056 4270105 complement(2173185..2173607) 1 NC_008340.1 PFAM: ferric-uptake regulator; KEGG: lpp:lpp0438 ferric uptake regulation protein; ferric uptake regulator family protein 2173607 4270105 Mlg_1905 Alkalilimnicola ehrlichii MLHE-1 ferric uptake regulator family protein YP_742739.1 2173185 R 187272 CDS YP_742740.1 114321057 4270106 2173702..2174055 1 NC_008340.1 PFAM: SmpA/OmlA domain protein; KEGG: mca:MCA2622 small protein A; SmpA/OmlA domain-containing protein 2174055 4270106 Mlg_1906 Alkalilimnicola ehrlichii MLHE-1 SmpA/OmlA domain-containing protein YP_742740.1 2173702 D 187272 CDS YP_742741.1 114321058 4270107 complement(2174063..2174356) 1 NC_008340.1 PFAM: protein of unknown function UPF0125; KEGG: noc:Noc_1196 hypothetical protein; hypothetical protein 2174356 4270107 Mlg_1907 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742741.1 2174063 R 187272 CDS YP_742742.1 114321059 4270108 complement(2174349..2174780) 1 NC_008340.1 PFAM: cyclase/dehydrase; KEGG: lpp:lpp0435 hypothetical protein; cyclase 2174780 4270108 Mlg_1908 Alkalilimnicola ehrlichii MLHE-1 cyclase YP_742742.1 2174349 R 187272 CDS YP_742743.1 114321060 4270109 2174894..2175376 1 NC_008340.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 2175376 smpB 4270109 smpB Alkalilimnicola ehrlichii MLHE-1 SsrA-binding protein YP_742743.1 2174894 D 187272 CDS YP_742744.1 114321061 4270111 2176166..2176603 1 NC_008340.1 hypothetical protein 2176603 4270111 Mlg_1910 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742744.1 2176166 D 187272 CDS YP_742745.1 114321062 4270112 2176935..2177636 1 NC_008340.1 hypothetical protein 2177636 4270112 Mlg_1911 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742745.1 2176935 D 187272 CDS YP_742746.1 114321063 4270113 2177639..2178898 1 NC_008340.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rba:RB9942 conserved hypothetical protein- SAM-dependent methyltransferase; type 12 methyltransferase 2178898 4270113 Mlg_1912 Alkalilimnicola ehrlichii MLHE-1 type 12 methyltransferase YP_742746.1 2177639 D 187272 CDS YP_742747.1 114321064 4270114 2178996..2180264 1 NC_008340.1 PFAM: peptidase M42 family protein; KEGG: dge:Dgeo_1994 peptidase M42; peptidase M42 family protein 2180264 4270114 Mlg_1913 Alkalilimnicola ehrlichii MLHE-1 peptidase M42 family protein YP_742747.1 2178996 D 187272 CDS YP_742748.1 114321065 4270115 complement(2180388..2181353) 1 NC_008340.1 KEGG: ret:RHE_CH00964 hypothetical protein; hypothetical protein 2181353 4270115 Mlg_1914 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742748.1 2180388 R 187272 CDS YP_742749.1 114321066 4270116 complement(2181922..2183220) 1 NC_008340.1 KEGG: csa:Csal_1457 hypothetical protein; hypothetical protein 2183220 4270116 Mlg_1915 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742749.1 2181922 R 187272 CDS YP_742750.1 114321067 4270117 complement(2183499..2184452) 1 NC_008340.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: csa:Csal_0039 protein of unknown function DUF6, transmembrane; hypothetical protein 2184452 4270117 Mlg_1916 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742750.1 2183499 R 187272 CDS YP_742751.1 114321068 4270118 complement(2184651..2185211) 1 NC_008340.1 KEGG: xac:XAC4327 urea amidolyase; allophanate hydrolase 2185211 4270118 Mlg_1917 Alkalilimnicola ehrlichii MLHE-1 allophanate hydrolase YP_742751.1 2184651 R 187272 CDS YP_742752.1 114321069 4270119 complement(2185383..2185922) 1 NC_008340.1 KEGG: nmu:Nmul_A0942 hypothetical protein; hypothetical protein 2185922 4270119 Mlg_1918 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742752.1 2185383 R 187272 CDS YP_742753.1 114321070 4270122 2186743..2187315 1 NC_008340.1 PFAM: regulatory protein, MarR; KEGG: nwi:Nwi_0565 transcriptional regulatory protein, MarR family; MarR family transcriptional regulator 2187315 4270122 Mlg_1921 Alkalilimnicola ehrlichii MLHE-1 MarR family transcriptional regulator YP_742753.1 2186743 D 187272 CDS YP_742754.1 114321071 4270123 2187407..2187994 1 NC_008340.1 hypothetical protein 2187994 4270123 Mlg_1922 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742754.1 2187407 D 187272 CDS YP_742755.1 114321072 4270124 complement(2188099..2189223) 1 NC_008340.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: pol:Bpro_0163 ABC transporter related; ABC transporter-like protein 2189223 4270124 Mlg_1923 Alkalilimnicola ehrlichii MLHE-1 ABC transporter-like protein YP_742755.1 2188099 R 187272 CDS YP_742756.1 114321073 4270125 complement(2189216..2189884) 1 NC_008340.1 TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mfa:Mfla_1392 molybdate ABC transporter, permease; molybdate ABC transporter, inner membrane subunit 2189884 4270125 Mlg_1924 Alkalilimnicola ehrlichii MLHE-1 molybdate ABC transporter, inner membrane subunit YP_742756.1 2189216 R 187272 CDS YP_742757.1 114321074 4270126 complement(2189928..2190764) 1 NC_008340.1 TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: mfa:Mfla_1391 molybdenum ABC transporter, periplasmic molybdate-binding protein; molybdenum ABC transporter, periplasmic molybdate-binding protein 2190764 4270126 Mlg_1925 Alkalilimnicola ehrlichii MLHE-1 molybdenum ABC transporter, periplasmic molybdate-binding protein YP_742757.1 2189928 R 187272 CDS YP_742758.1 114321075 4270127 complement(2190836..2191621) 1 NC_008340.1 KEGG: mag:amb0850 xanthine and CO dehydrogenase maturation factor; xanthine and Co dehydrogenase maturation factor 2191621 4270127 Mlg_1926 Alkalilimnicola ehrlichii MLHE-1 xanthine and Co dehydrogenase maturation factor YP_742758.1 2190836 R 187272 CDS YP_742759.1 114321076 4270128 complement(2191760..2192149) 1 NC_008340.1 PFAM: regulatory protein, LysR; KEGG: pol:Bpro_2496 transcriptional regulator, ModE family; ModE family transcriptional regulator 2192149 4270128 Mlg_1927 Alkalilimnicola ehrlichii MLHE-1 ModE family transcriptional regulator YP_742759.1 2191760 R 187272 CDS YP_742760.1 114321077 4270129 complement(2192265..2192546) 1 NC_008340.1 hypothetical protein 2192546 4270129 Mlg_1928 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742760.1 2192265 R 187272 CDS YP_742761.1 114321078 4270130 2192740..2194146 1 NC_008340.1 KEGG: dar:Daro_1938 deoxyguanosinetriphosphate triphosphohydrolase; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; deoxyguanosinetriphosphate triphosphohydrolase 2194146 4270130 Mlg_1929 Alkalilimnicola ehrlichii MLHE-1 deoxyguanosinetriphosphate triphosphohydrolase YP_742761.1 2192740 D 187272 CDS YP_742762.1 114321079 4270131 complement(2194156..2196363) 1 NC_008340.1 KEGG: ppu:PP3319 sensory box protein/GGDEF domain protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase 2196363 4270131 Mlg_1930 Alkalilimnicola ehrlichii MLHE-1 PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase YP_742762.1 2194156 R 187272 CDS YP_742763.1 114321080 4270132 2196588..2197652 1 NC_008340.1 KEGG: dar:Daro_0927 hypothetical protein; hypothetical protein 2197652 4270132 Mlg_1931 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742763.1 2196588 D 187272 CDS YP_742764.1 114321081 4270133 complement(2197673..2198053) 1 NC_008340.1 KEGG: tel:tll1086 hypothetical protein; hypothetical protein 2198053 4270133 Mlg_1932 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742764.1 2197673 R 187272 CDS YP_742765.1 114321082 4270134 complement(2198190..2198564) 1 NC_008340.1 KEGG: pae:PA3880 hypothetical protein; hypothetical protein 2198564 4270134 Mlg_1933 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742765.1 2198190 R 187272 CDS YP_742766.1 114321083 4270135 2198702..2199868 1 NC_008340.1 PFAM: NnrS family protein; KEGG: neu:NE1696 hypothetical protein; NnrS family protein 2199868 4270135 Mlg_1934 Alkalilimnicola ehrlichii MLHE-1 NnrS family protein YP_742766.1 2198702 D 187272 CDS YP_742767.1 114321084 4270136 2199865..2200470 1 NC_008340.1 PFAM: Glutathione S-transferase, N-terminal domain; KEGG: cps:CPS_1910 glutathione S-transferase; glutathione S-transferase-like protein 2200470 4270136 Mlg_1935 Alkalilimnicola ehrlichii MLHE-1 glutathione S-transferase-like protein YP_742767.1 2199865 D 187272 CDS YP_742768.1 114321085 4270137 complement(2200771..2202252) 1 NC_008340.1 TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; Citrate transporter; KEGG: csa:Csal_1795 anion transporter; anion transporter 2202252 4270137 Mlg_1936 Alkalilimnicola ehrlichii MLHE-1 anion transporter YP_742768.1 2200771 R 187272 CDS YP_742769.1 114321086 4270138 complement(2202254..2203879) 1 NC_008340.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: dar:Daro_0926 histidine kinase, HAMP region:bacterial chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2203879 4270138 Mlg_1937 Alkalilimnicola ehrlichii MLHE-1 methyl-accepting chemotaxis sensory transducer YP_742769.1 2202254 R 187272 CDS YP_742770.1 114321087 4270139 complement(2203984..2205354) 1 NC_008340.1 KEGG: cps:CPS_4073 signal recognition particle protein; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54, G- domain; Signal peptide binding (SRP54) M- domain protein; SMART: AAA ATPase; signal recognition particle subunit FFH/SRP54 (srp54) 2205354 4270139 Mlg_1938 Alkalilimnicola ehrlichii MLHE-1 signal recognition particle subunit FFH/SRP54 (srp54) YP_742770.1 2203984 R 187272 CDS YP_742771.1 114321088 4270140 2205484..2206326 1 NC_008340.1 PFAM: cytochrome c assembly protein; KEGG: pst:PSPTO1471 hypothetical protein; cytochrome c assembly protein 2206326 4270140 Mlg_1939 Alkalilimnicola ehrlichii MLHE-1 cytochrome c assembly protein YP_742771.1 2205484 D 187272 CDS YP_742772.1 114321089 4270141 complement(2206379..2207032) 1 NC_008340.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: noc:Noc_0989 hypothetical protein; redoxin domain-containing protein 2207032 4270141 Mlg_1940 Alkalilimnicola ehrlichii MLHE-1 redoxin domain-containing protein YP_742772.1 2206379 R 187272 CDS YP_742773.1 114321090 4268109 complement(2207137..2208204) 1 NC_008340.1 PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: csa:Csal_3140 TRAP dicarboxylate transporter-DctP subunit; TRAP dicarboxylate transporter subunit DctP 2208204 4268109 Mlg_1941 Alkalilimnicola ehrlichii MLHE-1 TRAP dicarboxylate transporter subunit DctP YP_742773.1 2207137 R 187272 CDS YP_742774.1 114321091 4268110 2208455..2209282 1 NC_008340.1 PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: csa:Csal_3138 tripartite ATP-independent periplasmic transporter, DctQ component; tripartite ATP-independent periplasmic transporter DctQ 2209282 4268110 Mlg_1942 Alkalilimnicola ehrlichii MLHE-1 tripartite ATP-independent periplasmic transporter DctQ YP_742774.1 2208455 D 187272 CDS YP_742775.1 114321092 4268111 2209349..2210632 1 NC_008340.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: csa:Csal_3139 TRAP dicarboxylate transporter-DctM subunit; TRAP dicarboxylate transporter subunit DctM 2210632 4268111 Mlg_1943 Alkalilimnicola ehrlichii MLHE-1 TRAP dicarboxylate transporter subunit DctM YP_742775.1 2209349 D 187272 CDS YP_742776.1 114321093 4268112 complement(2210799..2212961) 1 NC_008340.1 KEGG: mca:MCA1309 polyribonucleotide nucleotidyltransferase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH, type 1, domain protein; SMART: KH domain protein; polynucleotide phosphorylase 2212961 4268112 Mlg_1944 Alkalilimnicola ehrlichii MLHE-1 polynucleotide phosphorylase YP_742776.1 2210799 R 187272 CDS YP_742777.1 114321094 4268113 complement(2212995..2213264) 1 NC_008340.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 2213264 rpsO 4268113 rpsO Alkalilimnicola ehrlichii MLHE-1 30S ribosomal protein S15 YP_742777.1 2212995 R 187272 CDS YP_742778.1 114321095 4268114 complement(2213362..2214288) 1 NC_008340.1 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 2214288 truB 4268114 truB Alkalilimnicola ehrlichii MLHE-1 tRNA pseudouridine synthase B YP_742778.1 2213362 R 187272 CDS YP_742779.1 114321096 4268115 complement(2214300..2214692) 1 NC_008340.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 2214692 rbfA 4268115 rbfA Alkalilimnicola ehrlichii MLHE-1 ribosome-binding factor A YP_742779.1 2214300 R 187272 CDS YP_742780.1 114321097 4268116 complement(2214700..2217351) 1 NC_008340.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 2217351 infB 4268116 infB Alkalilimnicola ehrlichii MLHE-1 translation initiation factor IF-2 YP_742780.1 2214700 R 187272 CDS YP_742781.1 114321098 4268117 complement(2217425..2218921) 1 NC_008340.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 2218921 nusA 4268117 nusA Alkalilimnicola ehrlichii MLHE-1 transcription elongation factor NusA YP_742781.1 2217425 R 187272 CDS YP_742782.1 114321099 4268118 complement(2218947..2219477) 1 NC_008340.1 in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein 2219477 4268118 Mlg_1950 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742782.1 2218947 R 187272 CDS YP_742783.1 114321100 4268120 2219764..2220234 1 NC_008340.1 hypothetical protein 2220234 4268120 Mlg_1951 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742783.1 2219764 D 187272 CDS YP_742784.1 114321101 4268121 complement(2220354..2222492) 1 NC_008340.1 catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA; 23S rRNA m(2)G2445 methyltransferase 2222492 rlmL 4268121 rlmL Alkalilimnicola ehrlichii MLHE-1 23S rRNA m(2)G2445 methyltransferase YP_742784.1 2220354 R 187272 CDS YP_742785.1 114321102 4268122 complement(2222500..2223054) 1 NC_008340.1 KEGG: hch:HCH_01554 hypothetical protein; hypothetical protein 2223054 4268122 Mlg_1953 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742785.1 2222500 R 187272 CDS YP_742786.1 114321103 4268123 2223384..2224601 1 NC_008340.1 KEGG: sdn:Sden_3099 hypothetical protein; hypothetical protein 2224601 4268123 Mlg_1954 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742786.1 2223384 D 187272 CDS YP_742787.1 114321104 4268124 complement(2224660..2225400) 1 NC_008340.1 PFAM: pseudouridine synthase; KEGG: dar:Daro_2869 pseudouridine synthase; tRNA pseudouridine synthase C 2225400 4268124 Mlg_1955 Alkalilimnicola ehrlichii MLHE-1 tRNA pseudouridine synthase C YP_742787.1 2224660 R 187272 CDS YP_742788.1 114321105 4268158 complement(2225446..2225805) 1 NC_008340.1 KEGG: tcx:Tcr_0831 hypothetical protein; hypothetical protein 2225805 4268158 Mlg_1956 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742788.1 2225446 R 187272 CDS YP_742789.1 114321106 4268159 complement(2225798..2227264) 1 NC_008340.1 KEGG: noc:Noc_2552 proton-translocating NADH-quinone oxidoreductase, chain N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit N 2227264 4268159 Mlg_1957 Alkalilimnicola ehrlichii MLHE-1 proton-translocating NADH-quinone oxidoreductase subunit N YP_742789.1 2225798 R 187272 CDS YP_742790.1 114321107 4268160 complement(2227347..2228852) 1 NC_008340.1 KEGG: noc:Noc_2553 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit M 2228852 4268160 Mlg_1958 Alkalilimnicola ehrlichii MLHE-1 proton-translocating NADH-quinone oxidoreductase subunit M YP_742790.1 2227347 R 187272 CDS YP_742791.1 114321108 4268161 complement(2228915..2230876) 1 NC_008340.1 KEGG: noc:Noc_2554 NADH-plastoquinone oxidoreductase, chain 5; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit L 2230876 4268161 Mlg_1959 Alkalilimnicola ehrlichii MLHE-1 proton-translocating NADH-quinone oxidoreductase subunit L YP_742791.1 2228915 R 187272 CDS YP_742792.1 114321109 4268162 complement(2230882..2231187) 1 NC_008340.1 PFAM: NADH-ubiquinone oxidoreductase, chain 4L; KEGG: noc:Noc_2555 NADH-ubiquinone oxidoreductase, chain 4L; NADH-ubiquinone oxidoreductase, chain 4L 2231187 4268162 Mlg_1960 Alkalilimnicola ehrlichii MLHE-1 NADH-ubiquinone oxidoreductase, chain 4L YP_742792.1 2230882 R 187272 CDS YP_742793.1 114321110 4268163 complement(2231231..2231827) 1 NC_008340.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 6; KEGG: noc:Noc_2556 NADH-ubiquinone/plastoquinone oxidoreductase, chain 6; NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 2231827 4268163 Mlg_1961 Alkalilimnicola ehrlichii MLHE-1 NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 YP_742793.1 2231231 R 187272 CDS YP_742794.1 114321111 4268164 complement(2231922..2232413) 1 NC_008340.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 2232413 4268164 Mlg_1962 Alkalilimnicola ehrlichii MLHE-1 NADH dehydrogenase subunit I YP_742794.1 2231922 R 187272 CDS YP_742795.1 114321112 4268165 complement(2232425..2233444) 1 NC_008340.1 PFAM: respiratory-chain NADH dehydrogenase, subunit 1; KEGG: cbu:CBU_1441 NADH dehydrogenase I, H subunit; respiratory-chain NADH dehydrogenase, subunit 1 2233444 4268165 Mlg_1963 Alkalilimnicola ehrlichii MLHE-1 respiratory-chain NADH dehydrogenase, subunit 1 YP_742795.1 2232425 R 187272 CDS YP_742796.1 114321113 4268166 complement(2233476..2235869) 1 NC_008340.1 Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit G 2235869 4268166 Mlg_1964 Alkalilimnicola ehrlichii MLHE-1 NADH dehydrogenase subunit G YP_742796.1 2233476 R 187272 CDS YP_742797.1 114321114 4268167 complement(2235872..2237149) 1 NC_008340.1 KEGG: lpp:lpp2831 NADH dehydrogenase I chain F; TIGRFAM: NADH-quinone oxidoreductase, F subunit; PFAM: Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; NADH-quinone oxidoreductase, F subunit 2237149 4268167 Mlg_1965 Alkalilimnicola ehrlichii MLHE-1 NADH-quinone oxidoreductase, F subunit YP_742797.1 2235872 R 187272 CDS YP_742798.1 114321115 4268168 complement(2237153..2237653) 1 NC_008340.1 KEGG: noc:Noc_2561 NADH dehydrogenase (ubiquinone), 24 kDa subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone), 24 kDa subunit; NADH-quinone oxidoreductase, E subunit 2237653 4268168 Mlg_1966 Alkalilimnicola ehrlichii MLHE-1 NADH-quinone oxidoreductase, E subunit YP_742798.1 2237153 R 187272 CDS YP_742799.1 114321116 4268169 complement(2237650..2238903) 1 NC_008340.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit D 2238903 4268169 Mlg_1967 Alkalilimnicola ehrlichii MLHE-1 NADH dehydrogenase subunit D YP_742799.1 2237650 R 187272 CDS YP_742800.1 114321117 4268170 complement(2238896..2239639) 1 NC_008340.1 KEGG: xac:XAC2702 NADH dehydrogenase I chain C; TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone), 30 kDa subunit; NADH (or F420H2) dehydrogenase, subunit C 2239639 4268170 Mlg_1968 Alkalilimnicola ehrlichii MLHE-1 NADH (or F420H2) dehydrogenase, subunit C YP_742800.1 2238896 R 187272 CDS YP_742801.1 114321118 4268171 complement(2239650..2240126) 1 NC_008340.1 KEGG: neu:NE1776 respiratory-chain NADH dehydrogenase 20 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; NADH-quinone oxidoreductase subunit B 2240126 4268171 Mlg_1969 Alkalilimnicola ehrlichii MLHE-1 NADH-quinone oxidoreductase subunit B YP_742801.1 2239650 R 187272 CDS YP_742802.1 114321119 4268172 complement(2240117..2240473) 1 NC_008340.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; KEGG: tcx:Tcr_0817 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 2240473 4268172 Mlg_1970 Alkalilimnicola ehrlichii MLHE-1 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 YP_742802.1 2240117 R 187272 CDS YP_742803.1 114321120 4268174 complement(2240805..2241161) 1 NC_008340.1 TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: ilo:IL0971 biopolymer transport protein; preprotein translocase subunit SecG 2241161 secG 4268174 secG Alkalilimnicola ehrlichii MLHE-1 preprotein translocase subunit SecG YP_742803.1 2240805 R 187272 CDS YP_742804.1 114321121 4268515 complement(2241207..2241959) 1 NC_008340.1 PFAM: triosephosphate isomerase; KEGG: dar:Daro_0947 triosephosphate isomerase; triosephosphate isomerase 2241959 4268515 Mlg_1972 Alkalilimnicola ehrlichii MLHE-1 triosephosphate isomerase YP_742804.1 2241207 R 187272 CDS YP_742805.1 114321122 4268516 complement(2242025..2243380) 1 NC_008340.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 2243380 glmM 4268516 glmM Alkalilimnicola ehrlichii MLHE-1 phosphoglucosamine mutase YP_742805.1 2242025 R 187272 CDS YP_742806.1 114321123 4268517 complement(2243382..2244278) 1 NC_008340.1 KEGG: bpm:BURPS1710b_1616 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase, DHPS; dihydropteroate synthase 2244278 4268517 Mlg_1974 Alkalilimnicola ehrlichii MLHE-1 dihydropteroate synthase YP_742806.1 2243382 R 187272 CDS YP_742807.1 114321124 4268518 complement(2244278..2246197) 1 NC_008340.1 KEGG: mca:MCA1848 cell division protein FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase, central domain protein; peptidase M41, FtsH extracellular; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; FtsH peptidase 2246197 4268518 Mlg_1975 Alkalilimnicola ehrlichii MLHE-1 FtsH peptidase YP_742807.1 2244278 R 187272 CDS YP_742808.1 114321125 4268519 complement(2246290..2246919) 1 NC_008340.1 PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: pae:PA4752 cell division protein ftsj homolog (ribosomal RNA large subunit methyltransferase J); ribosomal RNA methyltransferase RrmJ/FtsJ 2246919 4268519 Mlg_1976 Alkalilimnicola ehrlichii MLHE-1 ribosomal RNA methyltransferase RrmJ/FtsJ YP_742808.1 2246290 R 187272 CDS YP_742809.1 114321126 4268520 complement(2246906..2247175) 1 NC_008340.1 hypothetical protein 2247175 4268520 Mlg_1977 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742809.1 2246906 R 187272 CDS YP_742810.1 114321127 4268521 2247193..2247495 1 NC_008340.1 PFAM: protein of unknown function UPF0044; KEGG: vch:VC0635 RNA-binding protein containing KH domain; hypothetical protein 2247495 4268521 Mlg_1978 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742810.1 2247193 D 187272 CDS YP_742811.1 114321128 4268522 complement(2247482..2247934) 1 NC_008340.1 KEGG: eba:ebA4818 hypothetical protein; hypothetical protein 2247934 4268522 Mlg_1979 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742811.1 2247482 R 187272 CDS YP_742812.1 114321129 4268523 complement(2247996..2248472) 1 NC_008340.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 2248472 greA 4268523 greA Alkalilimnicola ehrlichii MLHE-1 transcription elongation factor GreA YP_742812.1 2247996 R 187272 CDS YP_742813.1 114321130 4268524 complement(2248469..2251705) 1 NC_008340.1 TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp; protein of unknown function DUF201; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain, oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; MGS domain protein; KEGG: noc:Noc_2572 carbamoyl-phosphate synthase, large subunit, glutamine-dependent; carbamoyl-phosphate synthase large subunit 2251705 4268524 Mlg_1981 Alkalilimnicola ehrlichii MLHE-1 carbamoyl-phosphate synthase large subunit YP_742813.1 2248469 R 187272 CDS YP_742814.1 114321131 4268525 complement(2251743..2252903) 1 NC_008340.1 TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; Carbamoyl-phosphate synthase, small chain; KEGG: vch:VC2390 carbamoyl-phosphate synthase, small subunit; carbamoyl-phosphate synthase small subunit 2252903 4268525 Mlg_1982 Alkalilimnicola ehrlichii MLHE-1 carbamoyl-phosphate synthase small subunit YP_742814.1 2251743 R 187272 CDS YP_742815.1 114321132 4268526 2253110..2254036 1 NC_008340.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pae:PA2812 ABC-2 type transport system ATP-binding protein; ABC transporter-like protein 2254036 4268526 Mlg_1983 Alkalilimnicola ehrlichii MLHE-1 ABC transporter-like protein YP_742815.1 2253110 D 187272 CDS YP_742816.1 114321133 4268527 2254029..2254811 1 NC_008340.1 PFAM: ABC-2 type transporter; KEGG: hch:HCH_04490 ABC-type multidrug transport system, permease component; ABC-2 type transporter 2254811 4268527 Mlg_1984 Alkalilimnicola ehrlichii MLHE-1 ABC-2 type transporter YP_742816.1 2254029 D 187272 CDS YP_742817.1 114321134 4268528 2254819..2256162 1 NC_008340.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 2256162 4268528 Mlg_1985 Alkalilimnicola ehrlichii MLHE-1 nicotinate phosphoribosyltransferase YP_742817.1 2254819 D 187272 CDS YP_742818.1 114321135 4268529 complement(2256241..2256558) 1 NC_008340.1 PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: sil:SPO0367 DNA-binding protein, H-NS family; histone family protein nucleoid-structuring protein H-NS 2256558 4268529 Mlg_1986 Alkalilimnicola ehrlichii MLHE-1 histone family protein nucleoid-structuring protein H-NS YP_742818.1 2256241 R 187272 CDS YP_742819.1 114321136 4268530 2256863..2258086 1 NC_008340.1 KEGG: xoo:XOO4083 hypothetical protein; hypothetical protein 2258086 4268530 Mlg_1987 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742819.1 2256863 D 187272 CDS YP_742820.1 114321137 4268531 complement(2258121..2258711) 1 NC_008340.1 PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: ade:Adeh_1455 pyridoxamine 5'-phosphate oxidase; pyridoxamine 5'-phosphate oxidase 2258711 4268531 Mlg_1988 Alkalilimnicola ehrlichii MLHE-1 pyridoxamine 5'-phosphate oxidase YP_742820.1 2258121 R 187272 CDS YP_742821.1 114321138 4270463 complement(2258791..2260212) 1 NC_008340.1 PFAM: protein of unknown function DUF107; KEGG: nmu:Nmul_A1039 protein of unknown function DUF107; nodulation efficiency protein NfeD 2260212 4270463 Mlg_1989 Alkalilimnicola ehrlichii MLHE-1 nodulation efficiency protein NfeD YP_742821.1 2258791 R 187272 CDS YP_742822.1 114321139 4270464 complement(2260316..2261020) 1 NC_008340.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pae:PA5281 probable hydrolase; HAD family hydrolase 2261020 4270464 Mlg_1990 Alkalilimnicola ehrlichii MLHE-1 HAD family hydrolase YP_742822.1 2260316 R 187272 CDS YP_742823.1 114321140 4270465 complement(2261013..2261744) 1 NC_008340.1 KEGG: hch:HCH_02528 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease; DNA polymerase III subunit epsilon 2261744 4270465 Mlg_1991 Alkalilimnicola ehrlichii MLHE-1 DNA polymerase III subunit epsilon YP_742823.1 2261013 R 187272 CDS YP_742824.1 114321141 4270466 complement(2261741..2262181) 1 NC_008340.1 An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease H 2262181 rnhA 4270466 rnhA Alkalilimnicola ehrlichii MLHE-1 ribonuclease H YP_742824.1 2261741 R 187272 CDS YP_742825.1 114321142 4270467 complement(2262183..2262998) 1 NC_008340.1 PFAM: Methyltransferase type 11; KEGG: pfl:PFL_3298 hypothetical protein; type 11 methyltransferase 2262998 4270467 Mlg_1993 Alkalilimnicola ehrlichii MLHE-1 type 11 methyltransferase YP_742825.1 2262183 R 187272 CDS YP_742826.1 114321143 4270468 2263131..2263901 1 NC_008340.1 PFAM: beta-lactamase domain protein; KEGG: neu:NE0138 metallo-beta-lactamase superfamily; hydroxyacylglutathione hydrolase 2263901 4270468 Mlg_1994 Alkalilimnicola ehrlichii MLHE-1 hydroxyacylglutathione hydrolase YP_742826.1 2263131 D 187272 CDS YP_742827.1 114321144 4270469 2263965..2265584 1 NC_008340.1 PFAM: Peptidoglycan-binding LysM; Lytic transglycosylase, catalytic; MLTD_N domain protein; KEGG: ilo:IL1698 soluble lytic murein transglycosylase; lytic transglycosylase catalytic subunit 2265584 4270469 Mlg_1995 Alkalilimnicola ehrlichii MLHE-1 lytic transglycosylase catalytic subunit YP_742827.1 2263965 D 187272 CDS YP_742828.1 114321145 4270470 complement(2265606..2265890) 1 NC_008340.1 TIGRFAM: cell division topological specificity factor MinE; PFAM: Septum formation topological specificity factor MinE; KEGG: pha:PSHAb0505 cell division topological specificity factor; cell division topological specificity factor MinE 2265890 4270470 Mlg_1996 Alkalilimnicola ehrlichii MLHE-1 cell division topological specificity factor MinE YP_742828.1 2265606 R 187272 CDS YP_742829.1 114321146 4270471 complement(2265893..2266702) 1 NC_008340.1 TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: pfo:Pfl_1694 septum site-determining protein MinD; septum site-determining protein MinD 2266702 4270471 Mlg_1997 Alkalilimnicola ehrlichii MLHE-1 septum site-determining protein MinD YP_742829.1 2265893 R 187272 CDS YP_742830.1 114321147 4270472 complement(2266735..2267460) 1 NC_008340.1 TIGRFAM: septum site-determining protein MinC; PFAM: Septum formation inhibitor MinC; Septum formation inhibitor MinC domain protein; KEGG: ppu:PP1734 septum site-determining protein MinC; septum site-determining protein MinC 2267460 4270472 Mlg_1998 Alkalilimnicola ehrlichii MLHE-1 septum site-determining protein MinC YP_742830.1 2266735 R 187272 CDS YP_742831.1 114321148 4270473 complement(2267939..2268682) 1 NC_008340.1 PFAM: peptidase S24, S26A and S26B; KEGG: son:SO0641 prophage MuSo1, transcriptional regulator, Cro/CI family; phage repressor 2268682 4270473 Mlg_1999 Alkalilimnicola ehrlichii MLHE-1 phage repressor YP_742831.1 2267939 R 187272 CDS YP_742832.1 114321149 4270474 2269014..2269196 1 NC_008340.1 hypothetical protein 2269196 4270474 Mlg_2000 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742832.1 2269014 D 187272 CDS YP_742833.1 114321150 4270475 complement(2269237..2269818) 1 NC_008340.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mac:MA1362 O-linked GlcNAc transferase; TPR repeat-containing protein 2269818 4270475 Mlg_2001 Alkalilimnicola ehrlichii MLHE-1 TPR repeat-containing protein YP_742833.1 2269237 R 187272 CDS YP_742834.1 114321151 4270476 complement(2269811..2270056) 1 NC_008340.1 hypothetical protein 2270056 4270476 Mlg_2002 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742834.1 2269811 R 187272 CDS YP_742835.1 114321152 4270477 complement(2270113..2272287) 1 NC_008340.1 PFAM: Na+/solute symporter; KEGG: csa:Csal_2927 Na+/solute symporter; Na+/solute symporter 2272287 4270477 Mlg_2003 Alkalilimnicola ehrlichii MLHE-1 Na+/solute symporter YP_742835.1 2270113 R 187272 CDS YP_742836.1 114321153 4270478 2272692..2274560 1 NC_008340.1 PFAM: cyclic nucleotide-binding; CBS domain containing protein; protein of unknown function DUF294, nucleotidyltransferase KEGG: mag:amb1544 predicted signal-transduction protein containing cAMP-binding and CBS domains; cyclic nucleotide-binding protein 2274560 4270478 Mlg_2004 Alkalilimnicola ehrlichii MLHE-1 cyclic nucleotide-binding protein YP_742836.1 2272692 D 187272 CDS YP_742837.1 114321154 4270479 2274575..2275702 1 NC_008340.1 PFAM: protein of unknown function DUF294, nucleotidyltransferase KEGG: rsp:RSP_0575 predicted signal transduction protein containing cyclic nucleotide-binding and CBS domains; hypothetical protein 2275702 4270479 Mlg_2005 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742837.1 2274575 D 187272 CDS YP_742838.1 114321155 4270480 2275718..2277907 1 NC_008340.1 KEGG: pol:Bpro_4151 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: histidine kinase A domain protein domain protein; Exonuclease, RNase T and DNA polymerase III; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; Exonuclease; PAS/PAC sensor protein 2277907 4270480 Mlg_2006 Alkalilimnicola ehrlichii MLHE-1 PAS/PAC sensor protein YP_742838.1 2275718 D 187272 CDS YP_742839.1 114321156 4269607 complement(2277974..2279932) 1 NC_008340.1 molecular chaperone; heat shock protein 90 2279932 4269607 Mlg_2007 Alkalilimnicola ehrlichii MLHE-1 heat shock protein 90 YP_742839.1 2277974 R 187272 CDS YP_742840.1 114321157 4269608 complement(2280033..2280452) 1 NC_008340.1 PFAM: CopG domain protein DNA-binding domain protein; KEGG: dar:Daro_3947 nickel responsive regulator; CopG family transcriptional regulator 2280452 4269608 Mlg_2008 Alkalilimnicola ehrlichii MLHE-1 CopG family transcriptional regulator YP_742840.1 2280033 R 187272 CDS YP_742841.1 114321158 4269609 complement(2280445..2281857) 1 NC_008340.1 KEGG: dar:Daro_3946 PAS; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 2281857 4269609 Mlg_2009 Alkalilimnicola ehrlichii MLHE-1 PAS/PAC sensor signal transduction histidine kinase YP_742841.1 2280445 R 187272 CDS YP_742842.1 114321159 4269610 complement(2281880..2283328) 1 NC_008340.1 PFAM: nickel-dependent hydrogenase, large subunit; KEGG: mag:amb1942 uptake hydrogenase; nickel-dependent hydrogenase, large subunit 2283328 4269610 Mlg_2010 Alkalilimnicola ehrlichii MLHE-1 nickel-dependent hydrogenase, large subunit YP_742842.1 2281880 R 187272 CDS YP_742843.1 114321160 4269611 complement(2283325..2284344) 1 NC_008340.1 PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; KEGG: rfr:Rfer_4120 uptake hydrogenase accessory protein HupU; NADH ubiquinone oxidoreductase, 20 kDa subunit 2284344 4269611 Mlg_2011 Alkalilimnicola ehrlichii MLHE-1 NADH ubiquinone oxidoreductase, 20 kDa subunit YP_742843.1 2283325 R 187272 CDS YP_742844.1 114321161 4269612 complement(2284341..2285795) 1 NC_008340.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: dar:Daro_3962 helix-turn-helix, fis-type; Fis family transcriptional regulator 2285795 4269612 Mlg_2012 Alkalilimnicola ehrlichii MLHE-1 Fis family transcriptional regulator YP_742844.1 2284341 R 187272 CDS YP_742845.1 114321162 4269613 complement(2285792..2287519) 1 NC_008340.1 PFAM: Enoyl-CoA hydratase/isomerase; formyl transferase domain protein; KEGG: dar:Daro_3963 enoyl-CoA hydratase/isomerase:formyl transferase, N-terminal:formyl transferase, C-terminal; formyl transferase domain-containing protein 2287519 4269613 Mlg_2013 Alkalilimnicola ehrlichii MLHE-1 formyl transferase domain-containing protein YP_742845.1 2285792 R 187272 CDS YP_742846.1 114321163 4269614 complement(2287541..2288593) 1 NC_008340.1 TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: rme:Rmet_1540 hydrogenase expression/formation protein HypE; hydrogenase expression/formation protein HypE 2288593 4269614 Mlg_2014 Alkalilimnicola ehrlichii MLHE-1 hydrogenase expression/formation protein HypE YP_742846.1 2287541 R 187272 CDS YP_742847.1 114321164 4269615 complement(2288590..2289726) 1 NC_008340.1 TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; KEGG: rme:Rmet_1539 hydrogenase expression/formation protein HypD; hydrogenase expression/formation protein HypD 2289726 4269615 Mlg_2015 Alkalilimnicola ehrlichii MLHE-1 hydrogenase expression/formation protein HypD YP_742847.1 2288590 R 187272 CDS YP_742848.1 114321165 4269616 complement(2289723..2289950) 1 NC_008340.1 TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: dar:Daro_3967 hydrogenase expression/formation protein (HUPF/HYPC); hydrogenase assembly chaperone hypC/hupF 2289950 4269616 Mlg_2016 Alkalilimnicola ehrlichii MLHE-1 hydrogenase assembly chaperone hypC/hupF YP_742848.1 2289723 R 187272 CDS YP_742849.1 114321166 4269617 complement(2289957..2292278) 1 NC_008340.1 TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: acylphosphatase; SUA5/yciO/yrdC, N-terminal domain; zinc finger, HypF domain protein; KEGG: rme:Rmet_1537 (NiFe) hydrogenase maturation protein HypF; (NiFe) hydrogenase maturation protein HypF 2292278 4269617 Mlg_2017 Alkalilimnicola ehrlichii MLHE-1 (NiFe) hydrogenase maturation protein HypF YP_742849.1 2289957 R 187272 CDS YP_742850.1 114321167 4269618 complement(2292280..2293227) 1 NC_008340.1 TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein, P47K; KEGG: rfr:Rfer_4096 hydrogenase accessory protein HypB; hydrogenase accessory protein HypB 2293227 4269618 Mlg_2018 Alkalilimnicola ehrlichii MLHE-1 hydrogenase accessory protein HypB YP_742850.1 2292280 R 187272 CDS YP_742851.1 114321168 4269619 complement(2293227..2293568) 1 NC_008340.1 TIGRFAM: hydrogenase nickel insertion protein HypA; PFAM: hydrogenase expression/synthesis, HypA; KEGG: rfr:Rfer_4095 hydrogenase nickel insertion protein HypA; hydrogenase nickel insertion protein HypA 2293568 4269619 Mlg_2019 Alkalilimnicola ehrlichii MLHE-1 hydrogenase nickel insertion protein HypA YP_742851.1 2293227 R 187272 CDS YP_742852.1 114321169 4269620 complement(2293568..2294707) 1 NC_008340.1 KEGG: mag:amb1644 Ni,Fe-hydrogenase I large subunit; hypothetical protein 2294707 4269620 Mlg_2020 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742852.1 2293568 R 187272 CDS YP_742853.1 114321170 4269621 complement(2294707..2295168) 1 NC_008340.1 KEGG: rsp:RSP_0503 HupJ, contains rubredoxin domain; hypothetical protein 2295168 4269621 Mlg_2021 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742853.1 2294707 R 187272 CDS YP_742854.1 114321171 4269622 complement(2295180..2295404) 1 NC_008340.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: rme:Rmet_1289 rubredoxin-type Fe(Cys)4 protein; rubredoxin-type Fe(Cys)4 protein 2295404 4269622 Mlg_2022 Alkalilimnicola ehrlichii MLHE-1 rubredoxin-type Fe(Cys)4 protein YP_742854.1 2295180 R 187272 CDS YP_742855.1 114321172 4269623 complement(2295401..2296237) 1 NC_008340.1 PFAM: HupH hydrogenase expression protein; KEGG: mca:MCA0161 hydrogenase expression/formation protein; HupH hydrogenase expression protein 2296237 4269623 Mlg_2023 Alkalilimnicola ehrlichii MLHE-1 HupH hydrogenase expression protein YP_742855.1 2295401 R 187272 CDS YP_742856.1 114321173 4268140 complement(2296246..2296683) 1 NC_008340.1 PFAM: hydrogenase-1 expression HyaE; KEGG: rme:Rmet_1291 hydrogenase-1 expression HyaE; hydrogenase-1 expression HyaE 2296683 4268140 Mlg_2024 Alkalilimnicola ehrlichii MLHE-1 hydrogenase-1 expression HyaE YP_742856.1 2296246 R 187272 CDS YP_742857.1 114321174 4268141 complement(2296652..2297038) 1 NC_008340.1 TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: dar:Daro_3985 hydrogenase expression/formation protein (HUPF/HYPC); hydrogenase assembly chaperone hypC/hupF 2297038 4268141 Mlg_2025 Alkalilimnicola ehrlichii MLHE-1 hydrogenase assembly chaperone hypC/hupF YP_742857.1 2296652 R 187272 CDS YP_742858.1 114321175 4268142 complement(2297038..2297664) 1 NC_008340.1 TIGRFAM: hydrogenase maturation protease; hydrogenase expression/formation protein; hydrogenase maturation peptidase superfamily; PFAM: peptidase M52, hydrogen uptake protein; KEGG: rme:Rmet_1293 hydrogenase expression/formation protein; HyaD peptidase 2297664 4268142 Mlg_2026 Alkalilimnicola ehrlichii MLHE-1 HyaD peptidase YP_742858.1 2297038 R 187272 CDS YP_742859.1 114321176 4268143 complement(2297727..2298449) 1 NC_008340.1 TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit; PFAM: cytochrome B561; KEGG: dar:Daro_3987 nickel-dependent hydrogenase b-type cytochrome subunit; Ni/Fe-hydrogenase, b-type cytochrome subunit 2298449 4268143 Mlg_2027 Alkalilimnicola ehrlichii MLHE-1 Ni/Fe-hydrogenase, b-type cytochrome subunit YP_742859.1 2297727 R 187272 CDS YP_742860.1 114321177 4268144 complement(2298497..2300284) 1 NC_008340.1 PFAM: nickel-dependent hydrogenase, large subunit; KEGG: mca:MCA0165 nickel-iron hydrogenase, large subunit; nickel-dependent hydrogenase, large subunit 2300284 4268144 Mlg_2028 Alkalilimnicola ehrlichii MLHE-1 nickel-dependent hydrogenase, large subunit YP_742860.1 2298497 R 187272 CDS YP_742861.1 114321178 4268145 complement(2300285..2301400) 1 NC_008340.1 KEGG: rme:Rmet_1298 hydrogenase (NiFe) small subunit (HydA); TIGRFAM: hydrogenase (NiFe) small subunit HydA; Twin-arginine translocation pathway signal; PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; Nickel-iron dehydrogenase small subunit, N-terminal domain protein; hydrogenase (NiFe) small subunit HydA 2301400 4268145 Mlg_2029 Alkalilimnicola ehrlichii MLHE-1 hydrogenase (NiFe) small subunit HydA YP_742861.1 2300285 R 187272 CDS YP_742862.1 114321179 4268146 2301812..2303818 1 NC_008340.1 PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: plt:Plut_1539 receptor; TonB-dependent receptor, plug 2303818 4268146 Mlg_2030 Alkalilimnicola ehrlichii MLHE-1 TonB-dependent receptor, plug YP_742862.1 2301812 D 187272 CDS YP_742863.1 114321180 4268147 2303844..2304656 1 NC_008340.1 KEGG: nme:NMB1475 hypothetical protein; Co2+ ABC transporter periplasmic component-like protein 2304656 4268147 Mlg_2031 Alkalilimnicola ehrlichii MLHE-1 Co2+ ABC transporter periplasmic component-like protein YP_742863.1 2303844 D 187272 CDS YP_742864.1 114321181 4268148 2304653..2305111 1 NC_008340.1 KEGG: tdn:Tmden_0060 hypothetical protein; hypothetical protein 2305111 4268148 Mlg_2032 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742864.1 2304653 D 187272 CDS YP_742865.1 114321182 4268149 2305098..2305751 1 NC_008340.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: tdn:Tmden_0062 cobalamin (vitamin B12) biosynthesis CbiM protein; cobalamin (vitamin B12) biosynthesis CbiM protein 2305751 4268149 Mlg_2033 Alkalilimnicola ehrlichii MLHE-1 cobalamin (vitamin B12) biosynthesis CbiM protein YP_742865.1 2305098 D 187272 CDS YP_742866.1 114321183 4268150 2305748..2306308 1 NC_008340.1 KEGG: ade:Adeh_0494 hypothetical protein; hypothetical protein 2306308 4268150 Mlg_2034 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742866.1 2305748 D 187272 CDS YP_742867.1 114321184 4268151 2306298..2307056 1 NC_008340.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ade:Adeh_0493 ABC transporter, ATPase subunit; ABC transporter-like protein 2307056 4268151 Mlg_2035 Alkalilimnicola ehrlichii MLHE-1 ABC transporter-like protein YP_742867.1 2306298 D 187272 CDS YP_742868.1 114321185 4268152 complement(2307098..2307298) 1 NC_008340.1 KEGG: tbd:Tbd_1667 hypothetical protein; hypothetical protein 2307298 4268152 Mlg_2036 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742868.1 2307098 R 187272 CDS YP_742869.1 114321186 4268153 complement(2307300..2307782) 1 NC_008340.1 TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase; KEGG: dar:Daro_0538 methylated-DNA-(protein)-cysteine S-methyltransferase; methylated-DNA--protein-cysteine methyltransferase 2307782 4268153 Mlg_2037 Alkalilimnicola ehrlichii MLHE-1 methylated-DNA--protein-cysteine methyltransferase YP_742869.1 2307300 R 187272 CDS YP_742870.1 114321187 4268154 complement(2307874..2309751) 1 NC_008340.1 TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: reu:Reut_B4490 acetolactate synthase, large subunit, biosynthetic type; acetolactate synthase, large subunit 2309751 4268154 Mlg_2038 Alkalilimnicola ehrlichii MLHE-1 acetolactate synthase, large subunit YP_742870.1 2307874 R 187272 CDS YP_742871.1 114321188 4268155 complement(2309897..2310292) 1 NC_008340.1 KEGG: pfo:Pfl_3982 methionine sulfoxide reductase B; TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; methionine-R-sulfoxide reductase 2310292 4268155 Mlg_2039 Alkalilimnicola ehrlichii MLHE-1 methionine-R-sulfoxide reductase YP_742871.1 2309897 R 187272 CDS YP_742872.1 114321189 4268156 complement(2310366..2311091) 1 NC_008340.1 PFAM: Silent information regulator protein Sir2; KEGG: pae:PA1125 probable cobalamin biosynthetic protein; silent information regulator protein Sir2 2311091 4268156 Mlg_2040 Alkalilimnicola ehrlichii MLHE-1 silent information regulator protein Sir2 YP_742872.1 2310366 R 187272 CDS YP_742873.1 114321190 4268157 2311166..2312380 1 NC_008340.1 KEGG: hch:HCH_05403 phosphoserine phosphatase SerB; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; PFAM: amino acid-binding ACT domain protein; Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase, subfamily IB hypothetical 1; Haloacid dehalogenase domain protein hydrolase, type 3; phosphoserine phosphatase 2312380 4268157 Mlg_2041 Alkalilimnicola ehrlichii MLHE-1 phosphoserine phosphatase YP_742873.1 2311166 D 187272 CDS YP_742874.1 114321191 4270176 2312667..2313725 1 NC_008340.1 PFAM: EAL domain protein; KEGG: dde:Dde_1073 diguanylate phosphodiesterase (EAL domain); diguanylate phosphodiesterase 2313725 4270176 Mlg_2042 Alkalilimnicola ehrlichii MLHE-1 diguanylate phosphodiesterase YP_742874.1 2312667 D 187272 CDS YP_742875.1 114321192 4270177 complement(2313740..2315059) 1 NC_008340.1 PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; PAS fold-4 domain protein; SMART: AAA ATPase; KEGG: dar:Daro_0682 helix-turn-helix, fis-type; Fis family transcriptional regulator 2315059 4270177 Mlg_2043 Alkalilimnicola ehrlichii MLHE-1 Fis family transcriptional regulator YP_742875.1 2313740 R 187272 CDS YP_742876.1 114321193 4270178 complement(2315215..2316216) 1 NC_008340.1 TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase, subunit II; KEGG: csa:Csal_2000 cytochrome d ubiquinol oxidase, subunit II; cytochrome d ubiquinol oxidase, subunit II 2316216 4270178 Mlg_2044 Alkalilimnicola ehrlichii MLHE-1 cytochrome d ubiquinol oxidase, subunit II YP_742876.1 2315215 R 187272 CDS YP_742877.1 114321194 4270179 complement(2316224..2317636) 1 NC_008340.1 PFAM: cytochrome bd ubiquinol oxidase, subunit I; KEGG: csa:Csal_2001 cytochrome bd ubiquinol oxidase, subunit I; cytochrome bd ubiquinol oxidase, subunit I 2317636 4270179 Mlg_2045 Alkalilimnicola ehrlichii MLHE-1 cytochrome bd ubiquinol oxidase, subunit I YP_742877.1 2316224 R 187272 CDS YP_742878.1 114321195 4270180 complement(2318024..2318845) 1 NC_008340.1 PFAM: protein of unknown function DUF81; KEGG: rru:Rru_A1348 protein of unknown function DUF81; hypothetical protein 2318845 4270180 Mlg_2046 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742878.1 2318024 R 187272 CDS YP_742879.1 114321196 4270181 complement(2318842..2320443) 1 NC_008340.1 PFAM: gamma-glutamyltranspeptidase; KEGG: bxe:Bxe_B1050 gamma-glutamyltransferase; gamma-glutamyltransferase 2 2320443 4270181 Mlg_2047 Alkalilimnicola ehrlichii MLHE-1 gamma-glutamyltransferase 2 YP_742879.1 2318842 R 187272 CDS YP_742880.1 114321197 4270182 2320634..2321731 1 NC_008340.1 PFAM: histone deacetylase superfamily; KEGG: sat:SYN_00740 histone deacetylase; histone deacetylase superfamily protein 2321731 4270182 Mlg_2048 Alkalilimnicola ehrlichii MLHE-1 histone deacetylase superfamily protein YP_742880.1 2320634 D 187272 CDS YP_742881.1 114321198 4270183 complement(2321784..2322905) 1 NC_008340.1 PFAM: protein of unknown function DUF294, nucleotidyltransferase KEGG: cps:CPS_4954 CBS domain protein; hypothetical protein 2322905 4270183 Mlg_2049 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742881.1 2321784 R 187272 CDS YP_742882.1 114321199 4270184 complement(2323156..2324937) 1 NC_008340.1 PFAM: Na+/solute symporter; KEGG: sde:Sde_3155 ribonuclease E and G; Na+/solute symporter 2324937 4270184 Mlg_2050 Alkalilimnicola ehrlichii MLHE-1 Na+/solute symporter YP_742882.1 2323156 R 187272 CDS YP_742883.1 114321200 4270185 complement(2324950..2325225) 1 NC_008340.1 KEGG: sde:Sde_3156 Maf-like protein; Maf-like protein 2325225 4270185 Mlg_2051 Alkalilimnicola ehrlichii MLHE-1 Maf-like protein YP_742883.1 2324950 R 187272 CDS YP_742884.1 114321201 4270186 complement(2325293..2327284) 1 NC_008340.1 PFAM: cyclic nucleotide-binding; CBS domain containing protein; protein of unknown function DUF294, nucleotidyltransferase KEGG: psb:Psyr_4702 cyclic nucleotide-binding:CBS: nucleotidyltransferase DUF294; cyclic nucleotide-binding protein 2327284 4270186 Mlg_2052 Alkalilimnicola ehrlichii MLHE-1 cyclic nucleotide-binding protein YP_742884.1 2325293 R 187272 CDS YP_742885.1 114321202 4270187 complement(2327416..2329560) 1 NC_008340.1 KEGG: mag:amb1543 DNA polymerase III; TIGRFAM: PAS sensor protein; DNA polymerase III, epsilon subunit; PFAM: histidine kinase, HAMP region domain protein; Exonuclease, RNase T and DNA polymerase III; PAS fold domain protein; SMART: PAS domain containing protein; Exonuclease; PAS/PAC sensor protein 2329560 4270187 Mlg_2053 Alkalilimnicola ehrlichii MLHE-1 PAS/PAC sensor protein YP_742885.1 2327416 R 187272 CDS YP_742886.1 114321203 4270188 complement(2329560..2329982) 1 NC_008340.1 PFAM: response regulator receiver; KEGG: pol:Bpro_4150 response regulator receiver domain protein (CheY-like); response regulator receiver protein 2329982 4270188 Mlg_2054 Alkalilimnicola ehrlichii MLHE-1 response regulator receiver protein YP_742886.1 2329560 R 187272 CDS YP_742887.1 114321204 4270189 2330202..2330453 1 NC_008340.1 hypothetical protein 2330453 4270189 Mlg_2055 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742887.1 2330202 D 187272 CDS YP_742888.1 114321205 4270190 complement(2330469..2331926) 1 NC_008340.1 PFAM: CBS domain containing protein; protein of unknown function DUF294, nucleotidyltransferase KEGG: mag:amb1544 predicted signal-transduction protein containing cAMP-binding and CBS domains; signal-transduction protein 2331926 4270190 Mlg_2056 Alkalilimnicola ehrlichii MLHE-1 signal-transduction protein YP_742888.1 2330469 R 187272 CDS YP_742889.1 114321206 4270191 2332096..2332470 1 NC_008340.1 hypothetical protein 2332470 4270191 Mlg_2057 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742889.1 2332096 D 187272 CDS YP_742890.1 114321207 4270192 complement(2332446..2333543) 1 NC_008340.1 PFAM: proline racemase; KEGG: csa:Csal_2339 proline racemase; proline racemase 2333543 4270192 Mlg_2058 Alkalilimnicola ehrlichii MLHE-1 proline racemase YP_742890.1 2332446 R 187272 CDS YP_742891.1 114321208 4270445 complement(2333533..2334633) 1 NC_008340.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mlo:mll7125 alcohol dehydrogenase; alcohol dehydrogenase 2334633 4270445 Mlg_2059 Alkalilimnicola ehrlichii MLHE-1 alcohol dehydrogenase YP_742891.1 2333533 R 187272 CDS YP_742892.1 114321209 4270446 2334879..2335259 1 NC_008340.1 hypothetical protein 2335259 4270446 Mlg_2060 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742892.1 2334879 D 187272 CDS YP_742893.1 114321210 4270447 2335350..2336678 1 NC_008340.1 PFAM: major facilitator superfamily MFS_1; KEGG: csa:Csal_2623 major facilitator superfamily MFS_1; major facilitator transporter 2336678 4270447 Mlg_2061 Alkalilimnicola ehrlichii MLHE-1 major facilitator transporter YP_742893.1 2335350 D 187272 CDS YP_742894.1 114321211 4270448 complement(2336622..2338865) 1 NC_008340.1 PFAM: MscS Mechanosensitive ion channel; KEGG: csa:Csal_0950 MscS mechanosensitive ion channel; mechanosensitive ion channel MscS 2338865 4270448 Mlg_2062 Alkalilimnicola ehrlichii MLHE-1 mechanosensitive ion channel MscS YP_742894.1 2336622 R 187272 CDS YP_742895.1 114321212 4270449 complement(2338968..2339984) 1 NC_008340.1 PFAM: AIR synthase related protein domain protein; KEGG: tko:TK1032 hydrogenase expression/formation protein HypE; AIR synthase-like protein 2339984 4270449 Mlg_2063 Alkalilimnicola ehrlichii MLHE-1 AIR synthase-like protein YP_742895.1 2338968 R 187272 CDS YP_742896.1 114321213 4270450 2340241..2341614 1 NC_008340.1 KEGG: dar:Daro_0549 TRAP transporter solute receptor, TAXI family; TRAP transporter solute receptor TAXI family protein 2341614 4270450 Mlg_2064 Alkalilimnicola ehrlichii MLHE-1 TRAP transporter solute receptor TAXI family protein YP_742896.1 2340241 D 187272 CDS YP_742897.1 114321214 4270451 complement(2341616..2342341) 1 NC_008340.1 PFAM: protein of unknown function UPF0066; KEGG: pca:Pcar_2362 uncharacterized ACR; hypothetical protein 2342341 4270451 Mlg_2065 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742897.1 2341616 R 187272 CDS YP_742898.1 114321215 4270452 complement(2342334..2344088) 1 NC_008340.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: tbd:Tbd_1456 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s); diguanylate cyclase/phosphodiesterase 2344088 4270452 Mlg_2066 Alkalilimnicola ehrlichii MLHE-1 diguanylate cyclase/phosphodiesterase YP_742898.1 2342334 R 187272 CDS YP_742899.1 114321216 4270453 complement(2344199..2344840) 1 NC_008340.1 KEGG: tbd:Tbd_2556 thiamine monophosphate synthase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; thiamine-phosphate pyrophosphorylase 2344840 4270453 Mlg_2067 Alkalilimnicola ehrlichii MLHE-1 thiamine-phosphate pyrophosphorylase YP_742899.1 2344199 R 187272 CDS YP_742900.1 114321217 4270454 2344957..2345127 1 NC_008340.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: bur:Bcep18194_A3960 rubredoxin-type Fe(Cys)4 protein; rubredoxin-type Fe(Cys)4 protein 2345127 4270454 Mlg_2068 Alkalilimnicola ehrlichii MLHE-1 rubredoxin-type Fe(Cys)4 protein YP_742900.1 2344957 D 187272 CDS YP_742901.1 114321218 4270455 complement(2345168..2346550) 1 NC_008340.1 PFAM: major facilitator superfamily MFS_1; KEGG: lic:LIC13210 permease of the major facilitator superfamily; major facilitator transporter 2346550 4270455 Mlg_2069 Alkalilimnicola ehrlichii MLHE-1 major facilitator transporter YP_742901.1 2345168 R 187272 CDS YP_742902.1 114321219 4270456 2347046..2348362 1 NC_008340.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: ilo:IL2363 ATP-dependent RNA helicase; DEAD/DEAH box helicase domain-containing protein 2348362 4270456 Mlg_2070 Alkalilimnicola ehrlichii MLHE-1 DEAD/DEAH box helicase domain-containing protein YP_742902.1 2347046 D 187272 CDS YP_742903.1 114321220 4270457 2348449..2349069 1 NC_008340.1 PFAM: protein of unknown function DUF479; KEGG: pae:PA4353 hypothetical protein; hypothetical protein 2349069 4270457 Mlg_2071 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742903.1 2348449 D 187272 CDS YP_742904.1 114321221 4270458 2349159..2350112 1 NC_008340.1 TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: csa:Csal_2671 TRAP transporter solute receptor, TAXI family; TRAP transporter solute receptor TAXI family protein 2350112 4270458 Mlg_2072 Alkalilimnicola ehrlichii MLHE-1 TRAP transporter solute receptor TAXI family protein YP_742904.1 2349159 D 187272 CDS YP_742905.1 114321222 4270459 2350167..2352287 1 NC_008340.1 TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: wsu:WS0747 hypothetical protein; TRAP transporter, 4TM/12TM fusion protein 2352287 4270459 Mlg_2073 Alkalilimnicola ehrlichii MLHE-1 TRAP transporter, 4TM/12TM fusion protein YP_742905.1 2350167 D 187272 CDS YP_742906.1 114321223 4270460 2352387..2352815 1 NC_008340.1 PFAM: CBS domain containing protein; KEGG: rpc:RPC_4046 CBS domain containing membrane protein; signal transduction protein 2352815 4270460 Mlg_2074 Alkalilimnicola ehrlichii MLHE-1 signal transduction protein YP_742906.1 2352387 D 187272 CDS YP_742907.1 114321224 4270461 2352829..2353662 1 NC_008340.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: csa:Csal_1505 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 2353662 4270461 Mlg_2075 Alkalilimnicola ehrlichii MLHE-1 MotA/TolQ/ExbB proton channel YP_742907.1 2352829 D 187272 CDS YP_742908.1 114321225 4270462 2353652..2354407 1 NC_008340.1 PFAM: OmpA/MotB domain protein; KEGG: csa:Csal_1504 OmpA/MotB; OmpA/MotB domain-containing protein 2354407 4270462 Mlg_2076 Alkalilimnicola ehrlichii MLHE-1 OmpA/MotB domain-containing protein YP_742908.1 2353652 D 187272 CDS YP_742909.1 114321226 4269396 2354486..2355634 1 NC_008340.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: eba:ebA784 hypothetical protein; diguanylate cyclase 2355634 4269396 Mlg_2077 Alkalilimnicola ehrlichii MLHE-1 diguanylate cyclase YP_742909.1 2354486 D 187272 CDS YP_742910.1 114321227 4269397 2355631..2356311 1 NC_008340.1 PFAM: Rhomboid family protein; KEGG: sru:SRU_0684 cytoplasmic membrane protein; rhomboid family protein 2356311 4269397 Mlg_2078 Alkalilimnicola ehrlichii MLHE-1 rhomboid family protein YP_742910.1 2355631 D 187272 CDS YP_742911.1 114321228 4269398 2356460..2358196 1 NC_008340.1 TIGRFAM: type IV-A pilus assembly ATPase PilB; PFAM: type II secretion system protein E; General secretory system II, protein E domain protein; KEGG: noc:Noc_0312 type II secretion system protein E; type IV-A pilus assembly ATPase PilB 2358196 4269398 Mlg_2079 Alkalilimnicola ehrlichii MLHE-1 type IV-A pilus assembly ATPase PilB YP_742911.1 2356460 D 187272 CDS YP_742912.1 114321229 4269399 2358221..2359474 1 NC_008340.1 PFAM: type II secretion system protein; KEGG: noc:Noc_0311 type II secretion system protein F; type II secretion system protein 2359474 4269399 Mlg_2080 Alkalilimnicola ehrlichii MLHE-1 type II secretion system protein YP_742912.1 2358221 D 187272 CDS YP_742913.1 114321230 4269400 2359476..2360357 1 NC_008340.1 PFAM: peptidase A24A, prepilin type IV; peptidase A24A domain protein; KEGG: dar:Daro_0637 peptidase A24A, prepilin type IV:peptidase A24A, N-terminal; type 4 prepilin peptidase 2360357 4269400 Mlg_2081 Alkalilimnicola ehrlichii MLHE-1 type 4 prepilin peptidase YP_742913.1 2359476 D 187272 CDS YP_742914.1 114321231 4269401 2360357..2361007 1 NC_008340.1 KEGG: sgl:SG0461 dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; dephospho-CoA kinase 2361007 4269401 Mlg_2082 Alkalilimnicola ehrlichii MLHE-1 dephospho-CoA kinase YP_742914.1 2360357 D 187272 CDS YP_742915.1 114321232 4269402 2360994..2361851 1 NC_008340.1 PFAM: protein of unknown function DUF1342; KEGG: mca:MCA2091 hypothetical protein; hypothetical protein 2361851 4269402 Mlg_2083 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742915.1 2360994 D 187272 CDS YP_742916.1 114321233 4269403 complement(2361885..2362844) 1 NC_008340.1 TIGRFAM: mutator MutT protein; PFAM: NUDIX hydrolase; thiamine monophosphate synthase; KEGG: pfl:PFL_4779 mutator MutT protein; hypothetical protein 2362844 4269403 Mlg_2084 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742916.1 2361885 R 187272 CDS YP_742917.1 114321234 4269404 complement(2362849..2364045) 1 NC_008340.1 KEGG: csa:Csal_2180 arginine biosynthesis bifunctional protein ArgJ; TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; PFAM: arginine biosynthesis protein ArgJ; glutamate N-acetyltransferase 2364045 4269404 Mlg_2085 Alkalilimnicola ehrlichii MLHE-1 glutamate N-acetyltransferase YP_742917.1 2362849 R 187272 CDS YP_742918.1 114321235 4269405 complement(2364056..2366785) 1 NC_008340.1 TIGRFAM: preprotein translocase, SecA subunit; PFAM: SEC-C motif domain protein; SecA DEAD domain protein; SecA Wing and Scaffold; SecA preprotein cross-linking region; KEGG: noc:Noc_2851 SecA protein; protein translocase subunit secA 2366785 4269405 Mlg_2086 Alkalilimnicola ehrlichii MLHE-1 protein translocase subunit secA YP_742918.1 2364056 R 187272 CDS YP_742919.1 114321236 4269406 2366897..2367361 1 NC_008340.1 KEGG: ppu:PP1344 hypothetical protein; hypothetical protein 2367361 4269406 Mlg_2087 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742919.1 2366897 D 187272 CDS YP_742920.1 114321237 4269407 complement(2367372..2368946) 1 NC_008340.1 KEGG: pst:PSPTO0949 hypothetical protein; hypothetical protein 2368946 4269407 Mlg_2088 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742920.1 2367372 R 187272 CDS YP_742921.1 114321238 4269408 2369069..2370118 1 NC_008340.1 catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate; fructose-bisphosphate aldolase 2370118 4269408 Mlg_2089 Alkalilimnicola ehrlichii MLHE-1 fructose-bisphosphate aldolase YP_742921.1 2369069 D 187272 CDS YP_742922.1 114321239 4269409 2370426..2372738 1 NC_008340.1 subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+; monovalent cation/H+ antiporter subunit A 2372738 4269409 Mlg_2090 Alkalilimnicola ehrlichii MLHE-1 monovalent cation/H+ antiporter subunit A YP_742922.1 2370426 D 187272 CDS YP_742923.1 114321240 4269410 2372740..2373162 1 NC_008340.1 subunit B of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit B 2373162 4269410 Mlg_2091 Alkalilimnicola ehrlichii MLHE-1 monovalent cation/H+ antiporter subunit B YP_742923.1 2372740 D 187272 CDS YP_742924.1 114321241 4269411 2373164..2373511 1 NC_008340.1 subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit C 2373511 4269411 Mlg_2092 Alkalilimnicola ehrlichii MLHE-1 monovalent cation/H+ antiporter subunit C YP_742924.1 2373164 D 187272 CDS YP_742925.1 114321242 4269412 2373508..2375013 1 NC_008340.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: jan:Jann_3692 NADH dehydrogenase (quinone); NADH dehydrogenase (quinone) 2375013 4269412 Mlg_2093 Alkalilimnicola ehrlichii MLHE-1 NADH dehydrogenase (quinone) YP_742925.1 2373508 D 187272 CDS YP_742926.1 114321243 4270072 2375010..2375489 1 NC_008340.1 PFAM: cation antiporter; KEGG: gsu:GSU2340 Na+/H+ ion antiporter family protein; cation antiporter 2375489 4270072 Mlg_2094 Alkalilimnicola ehrlichii MLHE-1 cation antiporter YP_742926.1 2375010 D 187272 CDS YP_742927.1 114321244 4270073 2375501..2375773 1 NC_008340.1 PFAM: multiple resistance and pH regulation protein F; KEGG: gsu:GSU2339 monovalent cation/proton antiporter, MrpF/PhaF family; multiple resistance and pH regulation protein F 2375773 4270073 Mlg_2095 Alkalilimnicola ehrlichii MLHE-1 multiple resistance and pH regulation protein F YP_742927.1 2375501 D 187272 CDS YP_742928.1 114321245 4270074 2375766..2376185 1 NC_008340.1 TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; KEGG: gsu:GSU2338 Na+/H+ antiporter component; monovalent cation/proton antiporter subunit MnhG/PhaG 2376185 4270074 Mlg_2096 Alkalilimnicola ehrlichii MLHE-1 monovalent cation/proton antiporter subunit MnhG/PhaG YP_742928.1 2375766 D 187272 CDS YP_742929.1 114321246 4270075 2376199..2377056 1 NC_008340.1 [carboxylating]; KEGG: pst:PSPTO0948 nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; nicotinate-nucleotide pyrophosphorylase 2377056 4270075 Mlg_2097 Alkalilimnicola ehrlichii MLHE-1 nicotinate-nucleotide pyrophosphorylase YP_742929.1 2376199 D 187272 CDS YP_742930.1 114321247 4270076 2377346..2379013 1 NC_008340.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; ABC transporter ATP-binding protein 2379013 4270076 Mlg_2098 Alkalilimnicola ehrlichii MLHE-1 ABC transporter ATP-binding protein YP_742930.1 2377346 D 187272 CDS YP_742931.1 114321248 4270077 2379261..2380130 1 NC_008340.1 TIGRFAM: formyltetrahydrofolate deformylase; PFAM: formyl transferase domain protein; amino acid-binding ACT domain protein; KEGG: bth:BT1381 formyltetrahydrofolate deformylase; formyltetrahydrofolate deformylase 2380130 4270077 Mlg_2099 Alkalilimnicola ehrlichii MLHE-1 formyltetrahydrofolate deformylase YP_742931.1 2379261 D 187272 CDS YP_742932.1 114321249 4270078 2380236..2380451 1 NC_008340.1 KEGG: cps:CPS_2608 hypothetical protein; hypothetical protein 2380451 4270078 Mlg_2100 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742932.1 2380236 D 187272 CDS YP_742933.1 114321250 4270079 complement(2380581..2381858) 1 NC_008340.1 KEGG: pae:PA5025 O-acetylhomoserine (thiol)-lyase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; aromatic amino acid beta-eliminating lyase/threonine aldolase; O-acetylhomoserine/O-acetylserine sulfhydrylase 2381858 4270079 Mlg_2101 Alkalilimnicola ehrlichii MLHE-1 O-acetylhomoserine/O-acetylserine sulfhydrylase YP_742933.1 2380581 R 187272 CDS YP_742934.1 114321251 4270080 2382428..2385214 1 NC_008340.1 KEGG: mca:MCA1634 ribonucleoside-diphosphate reductase, alpha subunit; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; PFAM: ribonucleotide reductase large subunit; ATP-cone domain protein; Ribonucleotide reductase large subunit, N terminal domain protein; ribonucleoside-diphosphate reductase subunit alpha 2385214 4270080 Mlg_2102 Alkalilimnicola ehrlichii MLHE-1 ribonucleoside-diphosphate reductase subunit alpha YP_742934.1 2382428 D 187272 CDS YP_742935.1 114321252 4270081 2385790..2386854 1 NC_008340.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit beta 2386854 4270081 Mlg_2103 Alkalilimnicola ehrlichii MLHE-1 ribonucleotide-diphosphate reductase subunit beta YP_742935.1 2385790 D 187272 CDS YP_742936.1 114321253 4270082 complement(2386851..2387777) 1 NC_008340.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: csa:Csal_0671 transcriptional regulator, LysR family; LysR family transcriptional regulator 2387777 4270082 Mlg_2104 Alkalilimnicola ehrlichii MLHE-1 LysR family transcriptional regulator YP_742936.1 2386851 R 187272 CDS YP_742937.1 114321254 4270083 2387875..2390196 1 NC_008340.1 catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase 2390196 4270083 Mlg_2105 Alkalilimnicola ehrlichii MLHE-1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase YP_742937.1 2387875 D 187272 CDS YP_742938.1 114321255 4270084 2390602..2391087 1 NC_008340.1 hypothetical protein 2391087 4270084 Mlg_2106 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742938.1 2390602 D 187272 CDS YP_742939.1 114321256 4270085 2391229..2391321 1 NC_008340.1 hypothetical protein 2391321 4270085 Mlg_2107 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742939.1 2391229 D 187272 CDS YP_742940.1 114321257 4270086 complement(2391351..2393306) 1 NC_008340.1 AcsA; in Sinorhizobium meliloti this enzyme is required for acetoacetate activation; similar to acetyl-CoA synthase; acetoacetyl-CoA synthetase 2393306 4270086 Mlg_2108 Alkalilimnicola ehrlichii MLHE-1 acetoacetyl-CoA synthetase YP_742940.1 2391351 R 187272 CDS YP_742941.1 114321258 4270087 2393692..2394519 1 NC_008340.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ade:Adeh_3760 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2394519 4270087 Mlg_2109 Alkalilimnicola ehrlichii MLHE-1 short-chain dehydrogenase/reductase SDR YP_742941.1 2393692 D 187272 CDS YP_742942.1 114321259 4270088 2394655..2395971 1 NC_008340.1 FadI; fatty acid oxidation complex component beta; functions in a heterotetramer with FadJ; similar to FadA2B2 complex; functions in beta-oxidation of fatty acids during anaerobic growth; 3-ketoacyl-CoA thiolase 2395971 fadI 4270088 fadI Alkalilimnicola ehrlichii MLHE-1 3-ketoacyl-CoA thiolase YP_742942.1 2394655 D 187272 CDS YP_742943.1 114321260 4270089 2395968..2398112 1 NC_008340.1 PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: ilo:IL0993 fatty oxidation complex, alpha subunit; short chain enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase 2398112 4270089 Mlg_2111 Alkalilimnicola ehrlichii MLHE-1 short chain enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase YP_742943.1 2395968 D 187272 CDS YP_742944.1 114321261 4269362 complement(2398607..2399134) 1 NC_008340.1 KEGG: bba:Bd0666 hypothetical protein; hypothetical protein 2399134 4269362 Mlg_2112 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742944.1 2398607 R 187272 CDS YP_742945.1 114321262 4269363 2399620..2400714 1 NC_008340.1 PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: csa:Csal_3004 membrane protein involved in aromatic hydrocarbon degradation; aromatic hydrocarbon degradation membrane protein 2400714 4269363 Mlg_2113 Alkalilimnicola ehrlichii MLHE-1 aromatic hydrocarbon degradation membrane protein YP_742945.1 2399620 D 187272 CDS YP_742946.1 114321263 4269364 2400923..2401660 1 NC_008340.1 PFAM: phosphoadenosine phosphosulfate reductase; KEGG: yps:YPTB0761 phosphoadenosine phosphosulfate reductase; phosphoadenylylsulfate reductase 2401660 4269364 Mlg_2114 Alkalilimnicola ehrlichii MLHE-1 phosphoadenylylsulfate reductase YP_742946.1 2400923 D 187272 CDS YP_742947.1 114321264 4269365 complement(2401784..2402098) 1 NC_008340.1 KEGG: mag:amb2940 hypothetical protein; hypothetical protein 2402098 4269365 Mlg_2115 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742947.1 2401784 R 187272 CDS YP_742948.1 114321265 4269366 complement(2402102..2402698) 1 NC_008340.1 PFAM: cytochrome c oxidase, subunit III; KEGG: mag:amb2941 heme/copper-type cytochrome/quinol oxidase, subunit 3; cytochrome c oxidase, subunit III 2402698 4269366 Mlg_2116 Alkalilimnicola ehrlichii MLHE-1 cytochrome c oxidase, subunit III YP_742948.1 2402102 R 187272 CDS YP_742949.1 114321266 4269367 2402895..2403347 1 NC_008340.1 KEGG: neu:NE2003 nitric oxide reductase, cytochrome c-containing subunit; nitric-oxide reductase 2403347 4269367 Mlg_2117 Alkalilimnicola ehrlichii MLHE-1 nitric-oxide reductase YP_742949.1 2402895 D 187272 CDS YP_742950.1 114321267 4269368 2403408..2404751 1 NC_008340.1 PFAM: cytochrome c oxidase, subunit I; KEGG: neu:NE2004 cytochrome c oxidase, subunit I; cytochrome c oxidase, subunit I 2404751 4269368 Mlg_2118 Alkalilimnicola ehrlichii MLHE-1 cytochrome c oxidase, subunit I YP_742950.1 2403408 D 187272 CDS YP_742951.1 114321268 4269369 2404862..2405674 1 NC_008340.1 PFAM: ATPase associated with various cellular activities, AAA_5; CbbQ/NirQ/NorQ C-terminal domain protein; KEGG: noc:Noc_1848 ATPase associated with various cellular activities, AAA_5; ATPase 2405674 4269369 Mlg_2119 Alkalilimnicola ehrlichii MLHE-1 ATPase YP_742951.1 2404862 D 187272 CDS YP_742952.1 114321269 4269370 2405703..2407646 1 NC_008340.1 PFAM: von Willebrand factor, type A; KEGG: noc:Noc_1847 nitric oxide reductase activation protein; von Willebrand factor A 2407646 4269370 Mlg_2120 Alkalilimnicola ehrlichii MLHE-1 von Willebrand factor A YP_742952.1 2405703 D 187272 CDS YP_742953.1 114321270 4269371 complement(2407856..2408251) 1 NC_008340.1 KEGG: ccr:CC0412 hypothetical protein; hypothetical protein 2408251 4269371 Mlg_2121 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742953.1 2407856 R 187272 CDS YP_742954.1 114321271 4269372 2408392..2411031 1 NC_008340.1 KEGG: sat:SYN_02383 phosphoenolpyruvate synthase; phosphoenolpyruvate synthase 2411031 4269372 Mlg_2122 Alkalilimnicola ehrlichii MLHE-1 phosphoenolpyruvate synthase YP_742954.1 2408392 D 187272 CDS YP_742955.1 114321272 4269373 complement(2411135..2412484) 1 NC_008340.1 converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; glutamate dehydrogenase 2412484 4269373 Mlg_2123 Alkalilimnicola ehrlichii MLHE-1 glutamate dehydrogenase YP_742955.1 2411135 R 187272 CDS YP_742956.1 114321273 4269374 complement(2412706..2415180) 1 NC_008340.1 functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; acyl-CoA dehydrogenase 2415180 4269374 Mlg_2124 Alkalilimnicola ehrlichii MLHE-1 acyl-CoA dehydrogenase YP_742956.1 2412706 R 187272 CDS YP_742957.1 114321274 4269375 complement(2415197..2416387) 1 NC_008340.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 2416387 4269375 Mlg_2125 Alkalilimnicola ehrlichii MLHE-1 acetyl-CoA acetyltransferase YP_742957.1 2415197 R 187272 CDS YP_742958.1 114321275 4269376 complement(2416423..2418840) 1 NC_008340.1 PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: neu:NE1528 3-hydroxyacyl-CoA dehydrogenase oxidoreductase; 3-hydroxyacyl-CoA dehydrogenase 2418840 4269376 Mlg_2126 Alkalilimnicola ehrlichii MLHE-1 3-hydroxyacyl-CoA dehydrogenase YP_742958.1 2416423 R 187272 CDS YP_742959.1 114321276 4269377 complement(2418857..2420719) 1 NC_008340.1 PFAM: AMP-dependent synthetase and ligase; KEGG: neu:NE1549 AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase 2420719 4269377 Mlg_2127 Alkalilimnicola ehrlichii MLHE-1 AMP-dependent synthetase/ligase YP_742959.1 2418857 R 187272 CDS YP_742960.1 114321277 4269378 complement(2420742..2423066) 1 NC_008340.1 functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; acyl-CoA dehydrogenase 2423066 fadE 4269378 fadE Alkalilimnicola ehrlichii MLHE-1 acyl-CoA dehydrogenase YP_742960.1 2420742 R 187272 CDS YP_742961.1 114321278 4269869 complement(2423214..2423903) 1 NC_008340.1 PFAM: regulatory protein, TetR; KEGG: eba:c1A220 transcriptional regulator, TetR family; TetR family transcriptional regulator 2423903 4269869 Mlg_2129 Alkalilimnicola ehrlichii MLHE-1 TetR family transcriptional regulator YP_742961.1 2423214 R 187272 CDS YP_742962.1 114321279 4269870 2424128..2425099 1 NC_008340.1 PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: noc:Noc_1382 heat shock protein DnaJ-like; molecular chaperone DnaJ 2425099 4269870 Mlg_2130 Alkalilimnicola ehrlichii MLHE-1 molecular chaperone DnaJ YP_742962.1 2424128 D 187272 CDS YP_742963.1 114321280 4269871 2425105..2425428 1 NC_008340.1 KEGG: noc:Noc_1383 transcriptional regulator, MerR family; MerR family transcriptional regulator 2425428 4269871 Mlg_2131 Alkalilimnicola ehrlichii MLHE-1 MerR family transcriptional regulator YP_742963.1 2425105 D 187272 CDS YP_742964.1 114321281 4269872 2425553..2429290 1 NC_008340.1 one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity; B12-dependent methionine synthase 2429290 metH 4269872 metH Alkalilimnicola ehrlichii MLHE-1 B12-dependent methionine synthase YP_742964.1 2425553 D 187272 CDS YP_742965.1 114321282 4269873 2429597..2430367 1 NC_008340.1 PFAM: cyclic nucleotide-binding; regulatory protein, Crp; KEGG: pae:PA1544 transcriptional regulator Anr; Crp/Fnr family transcriptional regulator 2430367 4269873 Mlg_2133 Alkalilimnicola ehrlichii MLHE-1 Crp/Fnr family transcriptional regulator YP_742965.1 2429597 D 187272 CDS YP_742966.1 114321283 4269874 complement(2430342..2430815) 1 NC_008340.1 KEGG: pae:PA3911 hypothetical protein; hypothetical protein 2430815 4269874 Mlg_2134 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742966.1 2430342 R 187272 CDS YP_742967.1 114321284 4269875 complement(2430812..2431750) 1 NC_008340.1 PFAM: peptidase U32; KEGG: pae:PA3912 hypothetical protein; peptidase U32 2431750 4269875 Mlg_2135 Alkalilimnicola ehrlichii MLHE-1 peptidase U32 YP_742967.1 2430812 R 187272 CDS YP_742968.1 114321285 4269876 complement(2431747..2432742) 1 NC_008340.1 PFAM: peptidase U32; KEGG: yps:YPTB0495 protease; peptidase U32 2432742 4269876 Mlg_2136 Alkalilimnicola ehrlichii MLHE-1 peptidase U32 YP_742968.1 2431747 R 187272 CDS YP_742969.1 114321286 4269877 2433464..2434519 1 NC_008340.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rme:Rmet_5645 alcohol dehydrogenase, zinc-binding; alcohol dehydrogenase 2434519 4269877 Mlg_2137 Alkalilimnicola ehrlichii MLHE-1 alcohol dehydrogenase YP_742969.1 2433464 D 187272 CDS YP_742970.1 114321287 4269878 2434516..2434902 1 NC_008340.1 KEGG: ade:Adeh_3030 hypothetical protein; hypothetical protein 2434902 4269878 Mlg_2138 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742970.1 2434516 D 187272 CDS YP_742971.1 114321288 4269879 complement(2434924..2435655) 1 NC_008340.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sdy:SDY_0787 ATP-binding component of glutamine high-affinity transport system; ABC transporter-like protein 2435655 4269879 Mlg_2139 Alkalilimnicola ehrlichii MLHE-1 ABC transporter-like protein YP_742971.1 2434924 R 187272 CDS YP_742972.1 114321289 4269880 complement(2435652..2436308) 1 NC_008340.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B1960 ABC polar amino acid transporter, inner membrane subunit; polar amino acid ABC transporter, inner membrane subunit 2436308 4269880 Mlg_2140 Alkalilimnicola ehrlichii MLHE-1 polar amino acid ABC transporter, inner membrane subunit YP_742972.1 2435652 R 187272 CDS YP_742973.1 114321290 4269881 complement(2436395..2437138) 1 NC_008340.1 PFAM: extracellular solute-binding protein, family 3; SMART: ionotropic glutamate receptor; KEGG: ypm:YP2327 glutamine-binding periplasmic protein; extracellular solute-binding protein 2437138 4269881 Mlg_2141 Alkalilimnicola ehrlichii MLHE-1 extracellular solute-binding protein YP_742973.1 2436395 R 187272 CDS YP_742974.1 114321291 4269882 complement(2437256..2438002) 1 NC_008340.1 PFAM: protein of unknown function DUF159; KEGG: gvi:gll2498 hypothetical protein; hypothetical protein 2438002 4269882 Mlg_2142 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742974.1 2437256 R 187272 CDS YP_742975.1 114321292 4269883 2438079..2438597 1 NC_008340.1 hypothetical protein 2438597 4269883 Mlg_2143 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742975.1 2438079 D 187272 CDS YP_742976.1 114321293 4269884 2438594..2439265 1 NC_008340.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sde:Sde_0124 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 2439265 4269884 Mlg_2144 Alkalilimnicola ehrlichii MLHE-1 short-chain dehydrogenase/reductase SDR YP_742976.1 2438594 D 187272 CDS YP_742977.1 114321294 4269885 2439772..2441190 1 NC_008340.1 PFAM: outer membrane efflux protein; KEGG: ava:Ava_1015 outer membrane efflux protein; outer membrane efflux protein 2441190 4269885 Mlg_2145 Alkalilimnicola ehrlichii MLHE-1 outer membrane efflux protein YP_742977.1 2439772 D 187272 CDS YP_742978.1 114321295 4269886 2441193..2442446 1 NC_008340.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: gsu:GSU0496 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 2442446 4269886 Mlg_2146 Alkalilimnicola ehrlichii MLHE-1 RND family efflux transporter MFP subunit YP_742978.1 2441193 D 187272 CDS YP_742979.1 114321296 4270142 2442456..2443193 1 NC_008340.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pca:Pcar_0366 ATP-binding protein of ABC transporter; ABC transporter-like protein 2443193 4270142 Mlg_2147 Alkalilimnicola ehrlichii MLHE-1 ABC transporter-like protein YP_742979.1 2442456 D 187272 CDS YP_742980.1 114321297 4270143 2443190..2444416 1 NC_008340.1 PFAM: protein of unknown function DUF214; KEGG: gme:Gmet_3036 protein of unknown function DUF214; hypothetical protein 2444416 4270143 Mlg_2148 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742980.1 2443190 D 187272 CDS YP_742981.1 114321298 4270144 2444409..2444936 1 NC_008340.1 hypothetical protein 2444936 4270144 Mlg_2149 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742981.1 2444409 D 187272 CDS YP_742982.1 114321299 4270145 2445306..2445866 1 NC_008340.1 PFAM: peptidase C39, bacteriocin processing; KEGG: ngo:NGO0427 hypothetical protein; peptidase C39, bacteriocin processing 2445866 4270145 Mlg_2150 Alkalilimnicola ehrlichii MLHE-1 peptidase C39, bacteriocin processing YP_742982.1 2445306 D 187272 CDS YP_742983.1 114321300 4270146 complement(2445966..2446760) 1 NC_008340.1 PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: ppu:PP0574 DNA-binding response regulator, LuxR family; LuxR family transcriptional regulator 2446760 4270146 Mlg_2151 Alkalilimnicola ehrlichii MLHE-1 LuxR family transcriptional regulator YP_742983.1 2445966 R 187272 CDS YP_742984.1 114321301 4270147 complement(2446832..2449336) 1 NC_008340.1 KEGG: pst:PSPTO4833 sensory box histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAC repeat-containing protein; PAS/PAC sensor signal transduction histidine kinase 2449336 4270147 Mlg_2152 Alkalilimnicola ehrlichii MLHE-1 PAS/PAC sensor signal transduction histidine kinase YP_742984.1 2446832 R 187272 CDS YP_742985.1 114321302 4270148 complement(2449407..2449796) 1 NC_008340.1 PFAM: response regulator receiver; KEGG: bba:Bd3035 nitrogen assimilation regulatory protein NtrX; response regulator receiver protein 2449796 4270148 Mlg_2153 Alkalilimnicola ehrlichii MLHE-1 response regulator receiver protein YP_742985.1 2449407 R 187272 CDS YP_742986.1 114321303 4270149 complement(2449817..2450341) 1 NC_008340.1 PFAM: TadE family protein; KEGG: pfo:Pfl_0638 TadE-like; TadE family protein 2450341 4270149 Mlg_2154 Alkalilimnicola ehrlichii MLHE-1 TadE family protein YP_742986.1 2449817 R 187272 CDS YP_742987.1 114321304 4270150 complement(2450338..2452149) 1 NC_008340.1 KEGG: pae:PA4297 hypothetical protein; hypothetical protein 2452149 4270150 Mlg_2155 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742987.1 2450338 R 187272 CDS YP_742988.1 114321305 4270151 complement(2452178..2452495) 1 NC_008340.1 KEGG: pae:PA4298 hypothetical protein; hypothetical protein 2452495 4270151 Mlg_2156 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742988.1 2452178 R 187272 CDS YP_742989.1 114321306 4270152 complement(2452511..2453272) 1 NC_008340.1 KEGG: pae:PA4299 hypothetical protein; hypothetical protein 2453272 4270152 Mlg_2157 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_742989.1 2452511 R 187272 CDS YP_742990.1 114321307 4270153 complement(2453259..2454197) 1 NC_008340.1 PFAM: type II secretion system protein; KEGG: pae:PA4300 hypothetical protein; type II secretion system protein 2454197 4270153 Mlg_2158 Alkalilimnicola ehrlichii MLHE-1 type II secretion system protein YP_742990.1 2453259 R 187272 CDS YP_742991.1 114321308 4270154 complement(2454214..2455098) 1 NC_008340.1 PFAM: type II secretion system protein; KEGG: pfo:Pfl_0645 type II secretion system protein; type II secretion system protein 2455098 4270154 Mlg_2159 Alkalilimnicola ehrlichii MLHE-1 type II secretion system protein YP_742991.1 2454214 R 187272 CDS YP_742992.1 114321309 4270155 complement(2455108..2456424) 1 NC_008340.1 PFAM: type II secretion system protein E; KEGG: pae:PA4302 probable type II secretion system protein; type II secretion system protein E 2456424 4270155 Mlg_2160 Alkalilimnicola ehrlichii MLHE-1 type II secretion system protein E YP_742992.1 2455108 R 187272 CDS YP_742993.1 114321310 4270156 complement(2456424..2457644) 1 NC_008340.1 KEGG: pae:PA4303 pilus assembly protein CpaE; pilus assembly protein CpaE 2457644 4270156 Mlg_2161 Alkalilimnicola ehrlichii MLHE-1 pilus assembly protein CpaE YP_742993.1 2456424 R 187272 CDS YP_742994.1 114321311 4270157 complement(2457634..2458920) 1 NC_008340.1 PFAM: type II and III secretion system protein; KEGG: pfo:Pfl_0648 type II and III secretion system protein; type II and III secretion system protein 2458920 4270157 Mlg_2162 Alkalilimnicola ehrlichii MLHE-1 type II and III secretion system protein YP_742994.1 2457634 R 187272 CDS YP_742995.1 114321312 4270158 complement(2458946..2459896) 1 NC_008340.1 KEGG: pae:PA4305 pilus assembly protein CpaB; Flp pilus assembly protein CpaB-like protein 2459896 4270158 Mlg_2163 Alkalilimnicola ehrlichii MLHE-1 Flp pilus assembly protein CpaB-like protein YP_742995.1 2458946 R 187272 CDS YP_742996.1 114321313 4270943 2460171..2460356 1 NC_008340.1 PFAM: Flp/Fap pilin component; KEGG: psb:Psyr_4389 Flp/Fap pilin component; Flp/Fap pilin component 2460356 4270943 Mlg_2164 Alkalilimnicola ehrlichii MLHE-1 Flp/Fap pilin component YP_742996.1 2460171 D 187272 CDS YP_742997.1 114321314 4270944 2460356..2460856 1 NC_008340.1 PFAM: peptidase A24A, prepilin type IV; KEGG: mfa:Mfla_1645 peptidase A24A, prepilin type IV; peptidase A24A, prepilin type IV 2460856 4270944 Mlg_2165 Alkalilimnicola ehrlichii MLHE-1 peptidase A24A, prepilin type IV YP_742997.1 2460356 D 187272 CDS YP_742998.1 114321315 4270945 complement(2461026..2462309) 1 NC_008340.1 TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: ppu:PP0803 protein secretion ABC efflux system, membrane fusion protein; HlyD family type I secretion membrane fusion protein 2462309 4270945 Mlg_2166 Alkalilimnicola ehrlichii MLHE-1 HlyD family type I secretion membrane fusion protein YP_742998.1 2461026 R 187272 CDS YP_742999.1 114321316 4270946 complement(2462302..2464491) 1 NC_008340.1 PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: ppu:PP0804 protein secretion ABC efflux system, permease and ATP-binding protein; ABC transporter-like protein 2464491 4270946 Mlg_2167 Alkalilimnicola ehrlichii MLHE-1 ABC transporter-like protein YP_742999.1 2462302 R 187272 CDS YP_743000.1 114321317 4270947 complement(2464488..2465867) 1 NC_008340.1 PFAM: outer membrane efflux protein; KEGG: ppu:PP0805 outer membrane efflux protein; outer membrane efflux protein 2465867 4270947 Mlg_2168 Alkalilimnicola ehrlichii MLHE-1 outer membrane efflux protein YP_743000.1 2464488 R 187272 CDS YP_743001.1 114321318 4270948 complement(2465867..2467780) 1 NC_008340.1 KEGG: ppu:PP0806 surface adhesion protein; hypothetical protein 2467780 4270948 Mlg_2169 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743001.1 2465867 R 187272 CDS YP_743002.1 114321319 4270949 complement(2467894..2468724) 1 NC_008340.1 PFAM: OmpA/MotB domain protein; KEGG: bte:BTH_II1488 outer membrane lipoprotein, OmpA/SmpA/OmlA family; OmpA/MotB domain-containing protein 2468724 4270949 Mlg_2170 Alkalilimnicola ehrlichii MLHE-1 OmpA/MotB domain-containing protein YP_743002.1 2467894 R 187272 CDS YP_743003.1 114321320 4270950 2468969..2470195 1 NC_008340.1 PFAM: EAL domain protein; response regulator receiver; KEGG: vpa:VPA0737 two-component response regulator; response regulator receiver modulated diguanylate phosphodiesterase 2470195 4270950 Mlg_2171 Alkalilimnicola ehrlichii MLHE-1 response regulator receiver modulated diguanylate phosphodiesterase YP_743003.1 2468969 D 187272 CDS YP_743004.1 114321321 4270951 2470213..2471223 1 NC_008340.1 hypothetical protein 2471223 4270951 Mlg_2172 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743004.1 2470213 D 187272 CDS YP_743005.1 114321322 4270952 complement(2471256..2471960) 1 NC_008340.1 KEGG: noc:Noc_0984 hypothetical protein; hypothetical protein 2471960 4270952 Mlg_2173 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743005.1 2471256 R 187272 CDS YP_743006.1 114321323 4270953 2471996..2472601 1 NC_008340.1 PFAM: protein of unknown function UPF0029; KEGG: hch:HCH_06880 hypothetical protein; hypothetical protein 2472601 4270953 Mlg_2174 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743006.1 2471996 D 187272 CDS YP_743007.1 114321324 4270954 2472727..2473713 1 NC_008340.1 PFAM: protein of unknown function DUF900, hydrolase; KEGG: vfi:VFA0139 hypothetical protein; hypothetical protein 2473713 4270954 Mlg_2175 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743007.1 2472727 D 187272 CDS YP_743008.1 114321325 4270955 complement(2473745..2474776) 1 NC_008340.1 KEGG: pai:PAE3316 oligopeptide transport ATP-binding protein, TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 2474776 4270955 Mlg_2176 Alkalilimnicola ehrlichii MLHE-1 oligopeptide/dipeptide ABC transporter ATPase YP_743008.1 2473745 R 187272 CDS YP_743009.1 114321326 4270956 complement(2474773..2475738) 1 NC_008340.1 KEGG: pai:PAE3317 oligopeptide transport ATP-binding protein, TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 2475738 4270956 Mlg_2177 Alkalilimnicola ehrlichii MLHE-1 oligopeptide/dipeptide ABC transporter ATPase YP_743009.1 2474773 R 187272 CDS YP_743010.1 114321327 4270957 complement(2475743..2477080) 1 NC_008340.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tko:TK1802 ABC-type dipeptide/oligopeptide transport system, permease component; binding-protein-dependent transport systems inner membrane component 2477080 4270957 Mlg_2178 Alkalilimnicola ehrlichii MLHE-1 binding-protein-dependent transport systems inner membrane component YP_743010.1 2475743 R 187272 CDS YP_743011.1 114321328 4270958 complement(2477077..2478195) 1 NC_008340.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pai:PAE3087 oligopeptide ABC transporter, permease; binding-protein-dependent transport systems inner membrane component 2478195 4270958 Mlg_2179 Alkalilimnicola ehrlichii MLHE-1 binding-protein-dependent transport systems inner membrane component YP_743011.1 2477077 R 187272 CDS YP_743012.1 114321329 4270959 complement(2478192..2480780) 1 NC_008340.1 KEGG: pai:PAE3088 oligopeptide binding protein; solute binding protein-like protein 2480780 4270959 Mlg_2180 Alkalilimnicola ehrlichii MLHE-1 solute binding protein-like protein YP_743012.1 2478192 R 187272 CDS YP_743013.1 114321330 4270960 2481023..2481622 1 NC_008340.1 KEGG: son:SO1968 hypothetical protein; hypothetical protein 2481622 4270960 Mlg_2181 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743013.1 2481023 D 187272 CDS YP_743014.1 114321331 4270961 complement(2481695..2482132) 1 NC_008340.1 KEGG: cbu:CBU_0714 hypothetical protein; hypothetical protein 2482132 4270961 Mlg_2182 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743014.1 2481695 R 187272 CDS YP_743015.1 114321332 4270962 2482184..2483407 1 NC_008340.1 PFAM: major facilitator superfamily MFS_1; KEGG: sde:Sde_2675 initiation factor 2; major facilitator transporter 2483407 4270962 Mlg_2183 Alkalilimnicola ehrlichii MLHE-1 major facilitator transporter YP_743015.1 2482184 D 187272 CDS YP_743016.1 114321333 4270963 complement(2483420..2484067) 1 NC_008340.1 PFAM: beta-lactamase domain protein; KEGG: eba:ebA2717 metallo-beta-lactamase; beta-lactamase domain-containing protein 2484067 4270963 Mlg_2184 Alkalilimnicola ehrlichii MLHE-1 beta-lactamase domain-containing protein YP_743016.1 2483420 R 187272 CDS YP_743017.1 114321334 4270964 2484174..2490701 1 NC_008340.1 KEGG: gme:Gmet_2580 excinuclease ABC, A subunit; TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; SMART: AAA ATPase; excinuclease ABC subunit A 2490701 4270964 Mlg_2185 Alkalilimnicola ehrlichii MLHE-1 excinuclease ABC subunit A YP_743017.1 2484174 D 187272 CDS YP_743018.1 114321335 4270965 complement(2490801..2491718) 1 NC_008340.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2491718 lpxC 4270965 lpxC Alkalilimnicola ehrlichii MLHE-1 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase YP_743018.1 2490801 R 187272 CDS YP_743019.1 114321336 4270966 complement(2491891..2493030) 1 NC_008340.1 TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ, GTPase; Tubulin/FtsZ domain protein; KEGG: hch:HCH_05877 cell division protein FtsZ; cell division protein FtsZ 2493030 4270966 Mlg_2187 Alkalilimnicola ehrlichii MLHE-1 cell division protein FtsZ YP_743019.1 2491891 R 187272 CDS YP_743020.1 114321337 4270967 complement(2493122..2494360) 1 NC_008340.1 PFAM: cell division protein FtsA; KEGG: mca:MCA2424 cell division protein FtsA; cell division protein FtsA 2494360 4270967 Mlg_2188 Alkalilimnicola ehrlichii MLHE-1 cell division protein FtsA YP_743020.1 2493122 R 187272 CDS YP_743021.1 114321338 4270968 complement(2494387..2495202) 1 NC_008340.1 PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein, FtsQ-type; KEGG: psp:PSPPH_4105 cell division protein FtsQ; polypeptide-transport-associated domain-containing protein 2495202 4270968 Mlg_2189 Alkalilimnicola ehrlichii MLHE-1 polypeptide-transport-associated domain-containing protein YP_743021.1 2494387 R 187272 CDS YP_743022.1 114321339 4270969 complement(2495199..2496134) 1 NC_008340.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase 2496134 ddl 4270969 ddl Alkalilimnicola ehrlichii MLHE-1 D-alanine--D-alanine ligase YP_743022.1 2495199 R 187272 CDS YP_743023.1 114321340 4270970 complement(2496131..2497027) 1 NC_008340.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 2497027 murB 4270970 murB Alkalilimnicola ehrlichii MLHE-1 UDP-N-acetylenolpyruvoylglucosamine reductase YP_743023.1 2496131 R 187272 CDS YP_743024.1 114321341 4270971 complement(2497024..2498463) 1 NC_008340.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 2498463 murC 4270971 murC Alkalilimnicola ehrlichii MLHE-1 UDP-N-acetylmuramate--L-alanine ligase YP_743024.1 2497024 R 187272 CDS YP_743025.1 114321342 4270972 complement(2498460..2499533) 1 NC_008340.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 2499533 murG 4270972 murG Alkalilimnicola ehrlichii MLHE-1 undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase YP_743025.1 2498460 R 187272 CDS YP_743026.1 114321343 4270973 complement(2499530..2500735) 1 NC_008340.1 TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: noc:Noc_2862 cell cycle protein, FtsW; cell division protein FtsW 2500735 4270973 Mlg_2194 Alkalilimnicola ehrlichii MLHE-1 cell division protein FtsW YP_743026.1 2499530 R 187272 CDS YP_743027.1 114321344 4270974 complement(2500728..2502077) 1 NC_008340.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 2502077 murD 4270974 murD Alkalilimnicola ehrlichii MLHE-1 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase YP_743027.1 2500728 R 187272 CDS YP_743028.1 114321345 4270975 complement(2502080..2503162) 1 NC_008340.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 2503162 mraY 4270975 mraY Alkalilimnicola ehrlichii MLHE-1 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_743028.1 2502080 R 187272 CDS YP_743029.1 114321346 4270976 complement(2503163..2504518) 1 NC_008340.1 TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; cytoplasmic peptidoglycan synthetases domain protein; Mur ligase, middle domain protein; KEGG: noc:Noc_2865 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D -alanyl ligase; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 2504518 4270976 Mlg_2197 Alkalilimnicola ehrlichii MLHE-1 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase YP_743029.1 2503163 R 187272 CDS YP_743030.1 114321347 4270977 complement(2504515..2506011) 1 NC_008340.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 2506011 murE 4270977 murE Alkalilimnicola ehrlichii MLHE-1 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_743030.1 2504515 R 187272 CDS YP_743031.1 114321348 4268670 complement(2506008..2507744) 1 NC_008340.1 PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; KEGG: noc:Noc_2867 peptidoglycan glycosyltransferase; peptidoglycan synthetase FtsI 2507744 4268670 Mlg_2199 Alkalilimnicola ehrlichii MLHE-1 peptidoglycan synthetase FtsI YP_743031.1 2506008 R 187272 CDS YP_743032.1 114321349 4268671 complement(2507767..2508042) 1 NC_008340.1 PFAM: cell division protein FtsL; KEGG: xcb:XC_3516 cell division protein; cell division protein FtsL 2508042 4268671 Mlg_2200 Alkalilimnicola ehrlichii MLHE-1 cell division protein FtsL YP_743032.1 2507767 R 187272 CDS YP_743033.1 114321350 4268672 complement(2508039..2508992) 1 NC_008340.1 TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: eba:ebA1452 S-adenosyl-methyltransferase MraW; S-adenosyl-methyltransferase MraW 2508992 mraW 4268672 mraW Alkalilimnicola ehrlichii MLHE-1 S-adenosyl-methyltransferase MraW YP_743033.1 2508039 R 187272 CDS YP_743034.1 114321351 4268673 complement(2508989..2509441) 1 NC_008340.1 MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ 2509441 4268673 Mlg_2202 Alkalilimnicola ehrlichii MLHE-1 cell division protein MraZ YP_743034.1 2508989 R 187272 CDS YP_743035.1 114321352 4268675 complement(2510180..2511028) 1 NC_008340.1 TIGRFAM: Protein of unknown function UPF0011; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: ecc:c3899 hypothetical protein YraL; hypothetical protein 2511028 4268675 Mlg_2203 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743035.1 2510180 R 187272 CDS YP_743036.1 114321353 4268676 2511157..2513043 1 NC_008340.1 PFAM: LppC family lipoprotein; Tetratricopeptide TPR_2 repeat protein; KEGG: noc:Noc_0356 LppC lipoprotein; LppC family lipoprotein 2513043 4268676 Mlg_2204 Alkalilimnicola ehrlichii MLHE-1 LppC family lipoprotein YP_743036.1 2511157 D 187272 CDS YP_743037.1 114321354 4268677 2513040..2513420 1 NC_008340.1 PFAM: protein of unknown function UPF0102; KEGG: bbr:BB4515 predicted endonuclease; hypothetical protein 2513420 4268677 Mlg_2205 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743037.1 2513040 D 187272 CDS YP_743038.1 114321355 4268678 2513499..2514089 1 NC_008340.1 catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate; phosphoheptose isomerase 2514089 4268678 Mlg_2206 Alkalilimnicola ehrlichii MLHE-1 phosphoheptose isomerase YP_743038.1 2513499 D 187272 CDS YP_743039.1 114321356 4268679 complement(2514126..2514539) 1 NC_008340.1 PFAM: Stringent starvation protein B; KEGG: hch:HCH_10003 stringent starvation protein B; ClpXP protease specificity-enhancing factor 2514539 4268679 Mlg_2207 Alkalilimnicola ehrlichii MLHE-1 ClpXP protease specificity-enhancing factor YP_743039.1 2514126 R 187272 CDS YP_743040.1 114321357 4268680 complement(2514565..2515188) 1 NC_008340.1 PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; KEGG: mca:MCA1959 stringent starvation protein A; glutathione S-transferase 2515188 4268680 Mlg_2208 Alkalilimnicola ehrlichii MLHE-1 glutathione S-transferase YP_743040.1 2514565 R 187272 CDS YP_743041.1 114321358 4268681 complement(2515267..2516001) 1 NC_008340.1 PFAM: cytochrome c1; KEGG: nmu:Nmul_A1003 cytochrome c1; cytochrome c1 2516001 4268681 Mlg_2209 Alkalilimnicola ehrlichii MLHE-1 cytochrome c1 YP_743041.1 2515267 R 187272 CDS YP_743042.1 114321359 4268682 complement(2516001..2517242) 1 NC_008340.1 PFAM: Cytochrome b/b6, N-terminal domain; Cytochrome b/b6, C-terminal domain; KEGG: pae:PA4430 ubiquinol-cytochrome c reductase cytochrome b subunit; cytochrome b/b6 2517242 4268682 Mlg_2210 Alkalilimnicola ehrlichii MLHE-1 cytochrome b/b6 YP_743042.1 2516001 R 187272 CDS YP_743043.1 114321360 4268683 complement(2517242..2517841) 1 NC_008340.1 KEGG: noc:Noc_0299 ubiquinol-cytochrome c reductase, iron-sulfur subunit; TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein; ubiquinol-cytochrome c reductase, iron-sulfur subunit 2517841 4268683 Mlg_2211 Alkalilimnicola ehrlichii MLHE-1 ubiquinol-cytochrome c reductase, iron-sulfur subunit YP_743043.1 2517242 R 187272 CDS YP_743044.1 114321361 4268684 complement(2518116..2518907) 1 NC_008340.1 PFAM: protein of unknown function DUF34; KEGG: hch:HCH_05302 hypothetical protein; hypothetical protein 2518907 4268684 Mlg_2212 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743044.1 2518116 R 187272 CDS YP_743045.1 114321362 4268685 2518981..2520207 1 NC_008340.1 PFAM: peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: csa:Csal_2211 peptidase S1 and S6, chymotrypsin/Hap; peptidase S1 and S6, chymotrypsin/Hap 2520207 4268685 Mlg_2213 Alkalilimnicola ehrlichii MLHE-1 peptidase S1 and S6, chymotrypsin/Hap YP_743045.1 2518981 D 187272 CDS YP_743046.1 114321363 4268686 complement(2520199..2521296) 1 NC_008340.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 2521296 4268686 Mlg_2214 Alkalilimnicola ehrlichii MLHE-1 histidinol-phosphate aminotransferase YP_743046.1 2520199 R 187272 CDS YP_743047.1 114321364 4269430 complement(2521293..2522609) 1 NC_008340.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 2522609 hisD 4269430 hisD Alkalilimnicola ehrlichii MLHE-1 histidinol dehydrogenase YP_743047.1 2521293 R 187272 CDS YP_743048.1 114321365 4269431 complement(2522670..2523317) 1 NC_008340.1 short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ; ATP phosphoribosyltransferase 2523317 hisG 4269431 hisG Alkalilimnicola ehrlichii MLHE-1 ATP phosphoribosyltransferase YP_743048.1 2522670 R 187272 CDS YP_743049.1 114321366 4269432 complement(2523348..2524604) 1 NC_008340.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2524604 4269432 Mlg_2217 Alkalilimnicola ehrlichii MLHE-1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_743049.1 2523348 R 187272 CDS YP_743050.1 114321367 4269433 complement(2524609..2524854) 1 NC_008340.1 PFAM: BolA family protein; KEGG: dar:Daro_3394 BolA-like protein; BolA family protein 2524854 4269433 Mlg_2218 Alkalilimnicola ehrlichii MLHE-1 BolA family protein YP_743050.1 2524609 R 187272 CDS YP_743051.1 114321368 4269434 complement(2524972..2525301) 1 NC_008340.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: noc:Noc_2783 sulfate transporter/antisigma-factor antagonist STAS; anti-sigma-factor antagonist 2525301 4269434 Mlg_2219 Alkalilimnicola ehrlichii MLHE-1 anti-sigma-factor antagonist YP_743051.1 2524972 R 187272 CDS YP_743052.1 114321369 4269435 complement(2525298..2525921) 1 NC_008340.1 PFAM: toluene tolerance family protein; KEGG: mfa:Mfla_0240 toluene tolerance; toluene tolerance family protein 2525921 4269435 Mlg_2220 Alkalilimnicola ehrlichii MLHE-1 toluene tolerance family protein YP_743052.1 2525298 R 187272 CDS YP_743053.1 114321370 4269436 complement(2525936..2526397) 1 NC_008340.1 PFAM: Mammalian cell entry related domain protein; KEGG: noc:Noc_2784 ABC-type transport system involved in resistance to organic solvents periplasmic component; hypothetical protein 2526397 4269436 Mlg_2221 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743053.1 2525936 R 187272 CDS YP_743054.1 114321371 4269437 complement(2526428..2527207) 1 NC_008340.1 PFAM: protein of unknown function DUF140; KEGG: mca:MCA1968 ABC transport system permease; hypothetical protein 2527207 4269437 Mlg_2222 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743054.1 2526428 R 187272 CDS YP_743055.1 114321372 4269438 complement(2527204..2528034) 1 NC_008340.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mca:MCA1969 ABC transporter, ATP-binding protein; ABC transporter-like protein 2528034 4269438 Mlg_2223 Alkalilimnicola ehrlichii MLHE-1 ABC transporter-like protein YP_743055.1 2527204 R 187272 CDS YP_743056.1 114321373 4269439 2528213..2529196 1 NC_008340.1 TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; KEGG: csa:Csal_2006 K+-dependent Na+/Ca+ exchanger related-protein; CaCA family Na(+)/Ca(+) antiporter 2529196 4269439 Mlg_2224 Alkalilimnicola ehrlichii MLHE-1 CaCA family Na(+)/Ca(+) antiporter YP_743056.1 2528213 D 187272 CDS YP_743057.1 114321374 4269440 2529229..2530254 1 NC_008340.1 KEGG: noc:Noc_2788 sugar phosphate isomerase involved in capsule formation, KpsF/GutQ; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS); KpsF/GutQ family protein 2530254 4269440 Mlg_2225 Alkalilimnicola ehrlichii MLHE-1 KpsF/GutQ family protein YP_743057.1 2529229 D 187272 CDS YP_743058.1 114321375 4269441 2530264..2530839 1 NC_008340.1 TIGRFAM: hydrolase, HAD-superfamily, subfamily IIIA; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; KEGG: bbr:BB4502 probable hydrolase; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 2530839 4269441 Mlg_2226 Alkalilimnicola ehrlichii MLHE-1 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase YP_743058.1 2530264 D 187272 CDS YP_743059.1 114321376 4269442 2530823..2531401 1 NC_008340.1 PFAM: protein of unknown function DUF1239; KEGG: noc:Noc_2790 protein of unknown function DUF1239; hypothetical protein 2531401 4269442 Mlg_2227 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743059.1 2530823 D 187272 CDS YP_743060.1 114321377 4269443 2531388..2531915 1 NC_008340.1 PFAM: OstA family protein; KEGG: tbd:Tbd_0535 OstA-like family protein; OstA family protein 2531915 4269443 Mlg_2228 Alkalilimnicola ehrlichii MLHE-1 OstA family protein YP_743060.1 2531388 D 187272 CDS YP_743061.1 114321378 4269444 2531912..2532637 1 NC_008340.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ppu:PP0953 ABC transporter, ATP-binding protein; ABC transporter-like protein 2532637 4269444 Mlg_2229 Alkalilimnicola ehrlichii MLHE-1 ABC transporter-like protein YP_743061.1 2531912 D 187272 CDS YP_743062.1 114321379 4269445 2532778..2534295 1 NC_008340.1 TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor; sigma-54 factor, core-binding region; sigma-54, DNA-binding domain protein; KEGG: pae:PA4462 RNA polymerase sigma-54 factor; RNA polymerase sigma-54 subunit RpoN 2534295 4269445 Mlg_2230 Alkalilimnicola ehrlichii MLHE-1 RNA polymerase sigma-54 subunit RpoN YP_743062.1 2532778 D 187272 CDS YP_743063.1 114321380 4269446 2534320..2534661 1 NC_008340.1 TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: tcx:Tcr_0972 sigma 54 modulation protein/ribosomal protein S30EA; sigma 54 modulation protein/SSU ribosomal protein S30P 2534661 4269446 Mlg_2231 Alkalilimnicola ehrlichii MLHE-1 sigma 54 modulation protein/SSU ribosomal protein S30P YP_743063.1 2534320 D 187272 CDS YP_743064.1 114321381 4270264 2534680..2535192 1 NC_008340.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; KEGG: noc:Noc_2795 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; PTS IIA-like nitrogen-regulatory protein PtsN 2535192 4270264 Mlg_2232 Alkalilimnicola ehrlichii MLHE-1 PTS IIA-like nitrogen-regulatory protein PtsN YP_743064.1 2534680 D 187272 CDS YP_743065.1 114321382 4270265 2535238..2536104 1 NC_008340.1 PFAM: Uncharacterised P-loop ATPase UPF0042; KEGG: noc:Noc_2797 uncharacterized P-loop ATPase UPF0042; hypothetical protein 2536104 4270265 Mlg_2233 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743065.1 2535238 D 187272 CDS YP_743066.1 114321383 4270266 2536101..2536460 1 NC_008340.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: sde:Sde_3182 HNH nuclease; HPr family phosphocarrier protein 2536460 4270266 Mlg_2234 Alkalilimnicola ehrlichii MLHE-1 HPr family phosphocarrier protein YP_743066.1 2536101 D 187272 CDS YP_743067.1 114321384 4270267 2536560..2536928 1 NC_008340.1 KEGG: hch:HCH_01809 hypothetical protein; hypothetical protein 2536928 4270267 Mlg_2235 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743067.1 2536560 D 187272 CDS YP_743068.1 114321385 4270268 complement(2536972..2538120) 1 NC_008340.1 KEGG: tbd:Tbd_2662 phosphoribosylaminoimidazole carboxylase, ATPase subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase subunit; PFAM: ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp; phosphoribosylaminoimidazole carboxylase 2538120 4270268 Mlg_2236 Alkalilimnicola ehrlichii MLHE-1 phosphoribosylaminoimidazole carboxylase YP_743068.1 2536972 R 187272 CDS YP_743069.1 114321386 4270269 complement(2538117..2538611) 1 NC_008340.1 KEGG: eba:ebA116 phosphoribosylaminoimidazole carboxylase catalytic subunit (AIR carboxylase) (AIRC), gene: PurE or BSU06420; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase, catalytic subunit 2538611 4270269 Mlg_2237 Alkalilimnicola ehrlichii MLHE-1 phosphoribosylaminoimidazole carboxylase, catalytic subunit YP_743069.1 2538117 R 187272 CDS YP_743070.1 114321387 4270270 2538719..2538955 1 NC_008340.1 PFAM: protein of unknown function DUF1078 domain protein; KEGG: sdn:Sden_1776 conserved hypothetical methyl-accepting chemotaxis protein; hypothetical protein 2538955 4270270 Mlg_2238 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743070.1 2538719 D 187272 CDS YP_743071.1 114321388 4270271 complement(2539585..2541393) 1 NC_008340.1 TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class I; PFAM: alpha/beta hydrolase fold; Poly-beta-hydroxybutyrate polymerase domain protein; KEGG: mag:amb3725 poly(3-hydroxyalkanoate) synthetase; poly(R)-hydroxyalkanoic acid synthase, class I 2541393 4270271 Mlg_2239 Alkalilimnicola ehrlichii MLHE-1 poly(R)-hydroxyalkanoic acid synthase, class I YP_743071.1 2539585 R 187272 CDS YP_743072.1 114321389 4270272 2541508..2542302 1 NC_008340.1 PFAM: protein of unknown function DUF548; KEGG: cvi:CV0463 hypothetical protein; hypothetical protein 2542302 4270272 Mlg_2240 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743072.1 2541508 D 187272 CDS YP_743073.1 114321390 4270274 complement(2543858..2544250) 1 NC_008340.1 PFAM: ribosomal protein S9; KEGG: ilo:IL0415 ribosomal protein S9; 30S ribosomal protein S9 2544250 4270274 Mlg_2241 Alkalilimnicola ehrlichii MLHE-1 30S ribosomal protein S9 YP_743073.1 2543858 R 187272 CDS YP_743074.1 114321391 4270275 complement(2544274..2544702) 1 NC_008340.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 2544702 rplM 4270275 rplM Alkalilimnicola ehrlichii MLHE-1 50S ribosomal protein L13 YP_743074.1 2544274 R 187272 CDS YP_743075.1 114321392 4270276 complement(2545018..2545329) 1 NC_008340.1 KEGG: bpm:BURPS1710b_0617 ferredoxin, 2Fe-2S; (2Fe-2S) ferredoxin 2545329 4270276 Mlg_2243 Alkalilimnicola ehrlichii MLHE-1 (2Fe-2S) ferredoxin YP_743075.1 2545018 R 187272 CDS YP_743076.1 114321393 4270277 complement(2545337..2546158) 1 NC_008340.1 S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine; S-adenosylmethionine decarboxylase 2546158 4270277 Mlg_2244 Alkalilimnicola ehrlichii MLHE-1 S-adenosylmethionine decarboxylase YP_743076.1 2545337 R 187272 CDS YP_743077.1 114321394 4270278 complement(2546280..2546690) 1 NC_008340.1 PFAM: OsmC family protein; KEGG: nmu:Nmul_A0342 OsmC-like protein; OsmC family protein 2546690 4270278 Mlg_2245 Alkalilimnicola ehrlichii MLHE-1 OsmC family protein YP_743077.1 2546280 R 187272 CDS YP_743078.1 114321395 4270279 2546853..2547509 1 NC_008340.1 complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons; cAMP-regulatory protein 2547509 4270279 Mlg_2246 Alkalilimnicola ehrlichii MLHE-1 cAMP-regulatory protein YP_743078.1 2546853 D 187272 CDS YP_743079.1 114321396 4270280 complement(2547540..2548343) 1 NC_008340.1 PFAM: Indole-3-glycerol phosphate synthase; KEGG: mca:MCA2587 indole-3-glycerol phosphate synthase; indole-3-glycerol phosphate synthase 2548343 4270280 Mlg_2247 Alkalilimnicola ehrlichii MLHE-1 indole-3-glycerol phosphate synthase YP_743079.1 2547540 R 187272 CDS YP_743080.1 114321397 4269189 complement(2548346..2549362) 1 NC_008340.1 TIGRFAM: anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase, family 3; KEGG: noc:Noc_2496 anthranilate phosphoribosyl transferase; anthranilate phosphoribosyltransferase 2549362 4269189 Mlg_2248 Alkalilimnicola ehrlichii MLHE-1 anthranilate phosphoribosyltransferase YP_743080.1 2548346 R 187272 CDS YP_743081.1 114321398 4269190 complement(2549368..2549946) 1 NC_008340.1 TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: pae:PA0649 anthranilate synthase component II; anthranilate synthase, component II 2549946 4269190 Mlg_2249 Alkalilimnicola ehrlichii MLHE-1 anthranilate synthase, component II YP_743081.1 2549368 R 187272 CDS YP_743082.1 114321399 4269191 complement(2549950..2551458) 1 NC_008340.1 with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I 2551458 4269191 Mlg_2250 Alkalilimnicola ehrlichii MLHE-1 anthranilate synthase component I YP_743082.1 2549950 R 187272 CDS YP_743083.1 114321400 4269192 complement(2551573..2552262) 1 NC_008340.1 TIGRFAM: phosphoglycolate phosphatase ; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: csa:Csal_2324 phosphoglycolate phosphatase; phosphoglycolate phosphatase 2552262 4269192 Mlg_2251 Alkalilimnicola ehrlichii MLHE-1 phosphoglycolate phosphatase YP_743083.1 2551573 R 187272 CDS YP_743084.1 114321401 4269193 complement(2552371..2553171) 1 NC_008340.1 PFAM: heat shock protein DnaJ domain protein; KEGG: pfl:PFL_5643 DnaJ-like protein DjlA; heat shock protein DnaJ domain-containing protein 2553171 4269193 Mlg_2252 Alkalilimnicola ehrlichii MLHE-1 heat shock protein DnaJ domain-containing protein YP_743084.1 2552371 R 187272 CDS YP_743085.1 114321402 4269194 2553300..2554655 1 NC_008340.1 PFAM: amine oxidase; KEGG: bur:Bcep18194_C6583 FAD dependent oxidoreductase; amine oxidase 2554655 4269194 Mlg_2253 Alkalilimnicola ehrlichii MLHE-1 amine oxidase YP_743085.1 2553300 D 187272 CDS YP_743086.1 114321403 4269195 2554652..2555905 1 NC_008340.1 PFAM: RNA methylase; Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mlo:mll0368 cyclopropane-fatty-acyl-phospholipid synthase; cyclopropane-fatty-acyl-phospholipid synthase 2555905 4269195 Mlg_2254 Alkalilimnicola ehrlichii MLHE-1 cyclopropane-fatty-acyl-phospholipid synthase YP_743086.1 2554652 D 187272 CDS YP_743087.1 114321404 4269196 2555899..2556807 1 NC_008340.1 PFAM: regulatory protein, MerR; KEGG: csa:Csal_0466 transcriptional regulator, MerR family; MerR family transcriptional regulator 2556807 4269196 Mlg_2255 Alkalilimnicola ehrlichii MLHE-1 MerR family transcriptional regulator YP_743087.1 2555899 D 187272 CDS YP_743088.1 114321405 4269197 2556825..2558264 1 NC_008340.1 PFAM: DNA photolyase, FAD-binding; DNA photolyase domain protein; KEGG: rru:Rru_A2903 deoxyribodipyrimidine photolyase; deoxyribodipyrimidine photo-lyase type I 2558264 4269197 Mlg_2256 Alkalilimnicola ehrlichii MLHE-1 deoxyribodipyrimidine photo-lyase type I YP_743088.1 2556825 D 187272 CDS YP_743089.1 114321406 4269198 2558363..2559256 1 NC_008340.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 2559256 4269198 Mlg_2257 Alkalilimnicola ehrlichii MLHE-1 phosphoribosylaminoimidazole-succinocarboxamide synthase YP_743089.1 2558363 D 187272 CDS YP_743090.1 114321407 4269199 2559282..2559458 1 NC_008340.1 hypothetical protein 2559458 4269199 Mlg_2258 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743090.1 2559282 D 187272 CDS YP_743091.1 114321408 4269200 complement(2559751..2560599) 1 NC_008340.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bbr:BB4132 enzyme; 5-carboxymethyl-2-hydroxymuconate delta-isomerase 2560599 4269200 Mlg_2259 Alkalilimnicola ehrlichii MLHE-1 5-carboxymethyl-2-hydroxymuconate delta-isomerase YP_743091.1 2559751 R 187272 CDS YP_743092.1 114321409 4269201 complement(2560634..2561647) 1 NC_008340.1 KEGG: bte:BTH_I1196 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase 2561647 4269201 Mlg_2260 Alkalilimnicola ehrlichii MLHE-1 glyceraldehyde-3-phosphate dehydrogenase YP_743092.1 2560634 R 187272 CDS YP_743093.1 114321410 4269202 complement(2561840..2563840) 1 NC_008340.1 KEGG: noc:Noc_2808 transketolase; TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase, central region; transketolase 2563840 4269202 Mlg_2261 Alkalilimnicola ehrlichii MLHE-1 transketolase YP_743093.1 2561840 R 187272 CDS YP_743094.1 114321411 4269203 2564035..2565192 1 NC_008340.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 2565192 4269203 Mlg_2262 Alkalilimnicola ehrlichii MLHE-1 S-adenosylmethionine synthetase YP_743094.1 2564035 D 187272 CDS YP_743095.1 114321412 4269204 2565310..2566722 1 NC_008340.1 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase 2566722 4269204 Mlg_2263 Alkalilimnicola ehrlichii MLHE-1 S-adenosyl-L-homocysteine hydrolase YP_743095.1 2565310 D 187272 CDS YP_743096.1 114321413 4269205 2567554..2568423 1 NC_008340.1 KEGG: nmu:Nmul_A2539 5,10-methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; 5,10-methylenetetrahydrofolate reductase 2568423 4269205 Mlg_2264 Alkalilimnicola ehrlichii MLHE-1 5,10-methylenetetrahydrofolate reductase YP_743096.1 2567554 D 187272 CDS YP_743097.1 114321414 4268228 2568474..2568959 1 NC_008340.1 PFAM: protein of unknown function DUF785; KEGG: cbu:CBU_1601 hypothetical protein; hypothetical protein 2568959 4268228 Mlg_2265 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743097.1 2568474 D 187272 CDS YP_743098.1 114321415 4268229 2568974..2569891 1 NC_008340.1 TIGRFAM: alpha-L-glutamate ligases, RimK family; PFAM: protein of unknown function DUF201; RimK domain protein ATP-grasp; KEGG: hch:HCH_00778 glutathione synthase/ribosomal protein S6 modification enzyme (glutaminyl transferase); 30S ribosomal protein S6 2569891 4268229 Mlg_2266 Alkalilimnicola ehrlichii MLHE-1 30S ribosomal protein S6 YP_743098.1 2568974 D 187272 CDS YP_743099.1 114321416 4268230 complement(2569936..2571192) 1 NC_008340.1 hypothetical protein 2571192 4268230 Mlg_2267 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743099.1 2569936 R 187272 CDS YP_743100.1 114321417 4268231 complement(2571537..2572187) 1 NC_008340.1 Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A); ribonuclease T 2572187 4268231 Mlg_2268 Alkalilimnicola ehrlichii MLHE-1 ribonuclease T YP_743100.1 2571537 R 187272 CDS YP_743101.1 114321418 4268232 complement(2572751..2574349) 1 NC_008340.1 PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; KEGG: mag:amb4386 ABC-type uncharacterized transport system, duplicated ATPase component; ABC transporter-like protein 2574349 4268232 Mlg_2269 Alkalilimnicola ehrlichii MLHE-1 ABC transporter-like protein YP_743101.1 2572751 R 187272 CDS YP_743102.1 114321419 4268233 complement(2574346..2575419) 1 NC_008340.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pae:PA1808 peptide transport system permease; binding-protein-dependent transport systems inner membrane component 2575419 4268233 Mlg_2270 Alkalilimnicola ehrlichii MLHE-1 binding-protein-dependent transport systems inner membrane component YP_743102.1 2574346 R 187272 CDS YP_743103.1 114321420 4268234 complement(2575419..2576510) 1 NC_008340.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: nwi:Nwi_0290 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 2576510 4268234 Mlg_2271 Alkalilimnicola ehrlichii MLHE-1 binding-protein-dependent transport systems inner membrane component YP_743103.1 2575419 R 187272 CDS YP_743104.1 114321421 4268235 complement(2576535..2576744) 1 NC_008340.1 PFAM: protein of unknown function UPF0150; KEGG: rpb:RPB_4320 protein of unknown function UPF0150; hypothetical protein 2576744 4268235 Mlg_2272 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743104.1 2576535 R 187272 CDS YP_743105.1 114321422 4268236 complement(2576751..2576936) 1 NC_008340.1 PFAM: YcfA family protein; KEGG: mac:MA2135 hypothetical protein; hypothetical protein 2576936 4268236 Mlg_2273 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743105.1 2576751 R 187272 CDS YP_743106.1 114321423 4268237 complement(2577009..2578811) 1 NC_008340.1 PFAM: extracellular solute-binding protein, family 5; KEGG: mag:amb4389 ABC-type oligopeptide transport system, periplasmic component; extracellular solute-binding protein 2578811 4268237 Mlg_2274 Alkalilimnicola ehrlichii MLHE-1 extracellular solute-binding protein YP_743106.1 2577009 R 187272 CDS YP_743107.1 114321424 4268238 complement(2578933..2579430) 1 NC_008340.1 KEGG: tcx:Tcr_1885 hypothetical protein; hypothetical protein 2579430 4268238 Mlg_2275 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743107.1 2578933 R 187272 CDS YP_743108.1 114321425 4268239 complement(2579486..2581741) 1 NC_008340.1 PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: wsu:WS1425 outer membrane receptor for iron-regulated colicin I receptor, porin, requires TonB gene product colicin I receptor; TonB-dependent receptor 2581741 4268239 Mlg_2276 Alkalilimnicola ehrlichii MLHE-1 TonB-dependent receptor YP_743108.1 2579486 R 187272 CDS YP_743109.1 114321426 4268240 2582002..2582793 1 NC_008340.1 [NADH]; PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mca:MCA1263 enoyl-(acyl-carrier-protein) reductase; enoyl-ACP reductase 2582793 4268240 Mlg_2277 Alkalilimnicola ehrlichii MLHE-1 enoyl-ACP reductase YP_743109.1 2582002 D 187272 CDS YP_743110.1 114321427 4268241 complement(2582847..2583245) 1 NC_008340.1 KEGG: ftl:FTL_0105 hypothetical membrane protein; hypothetical protein 2583245 4268241 Mlg_2278 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743110.1 2582847 R 187272 CDS YP_743111.1 114321428 4268242 complement(2583422..2585257) 1 NC_008340.1 TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: bha:BH1831 L-lactate permease; L-lactate transport 2585257 4268242 Mlg_2279 Alkalilimnicola ehrlichii MLHE-1 L-lactate transport YP_743111.1 2583422 R 187272 CDS YP_743112.1 114321429 4268243 complement(2585388..2586047) 1 NC_008340.1 PFAM: protein of unknown function DUF162; KEGG: dar:Daro_0673 protein of unknown function DUF162; hypothetical protein 2586047 4268243 Mlg_2280 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743112.1 2585388 R 187272 CDS YP_743113.1 114321430 4268244 complement(2586040..2587470) 1 NC_008340.1 TIGRFAM: iron-sulfur cluster binding protein; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: eba:ebA3917 iron-sulfur binding protein; iron-sulfur cluster binding protein 2587470 4268244 Mlg_2281 Alkalilimnicola ehrlichii MLHE-1 iron-sulfur cluster binding protein YP_743113.1 2586040 R 187272 CDS YP_743114.1 114321431 4268245 complement(2587470..2588252) 1 NC_008340.1 PFAM: protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: eba:ebA3918 predicted Fe-S oxidoreductase; hypothetical protein 2588252 4268245 Mlg_2282 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743114.1 2587470 R 187272 CDS YP_743115.1 114321432 4268378 2588519..2589286 1 NC_008340.1 PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: csa:Csal_0403 GntR-like protein; GntR family transcriptional regulator 2589286 4268378 Mlg_2283 Alkalilimnicola ehrlichii MLHE-1 GntR family transcriptional regulator YP_743115.1 2588519 D 187272 CDS YP_743116.1 114321433 4268379 complement(2589696..2591150) 1 NC_008340.1 KEGG: cbu:CBU_1451 peptidyl-prolyl cis-trans isomerse D - related protein; hypothetical protein 2591150 4268379 Mlg_2284 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743116.1 2589696 R 187272 CDS YP_743117.1 114321434 4268382 complement(2591450..2591722) 1 NC_008340.1 PFAM: histone family protein DNA-binding protein; KEGG: hch:HCH_02163 bacterial nucleoid DNA-binding protein; histone family protein DNA-binding protein 2591722 4268382 Mlg_2285 Alkalilimnicola ehrlichii MLHE-1 histone family protein DNA-binding protein YP_743117.1 2591450 R 187272 CDS YP_743118.1 114321435 4268383 complement(2591990..2594440) 1 NC_008340.1 KEGG: mca:MCA0531 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16, lon domain protein; AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; Lon-A peptidase 2594440 4268383 Mlg_2286 Alkalilimnicola ehrlichii MLHE-1 Lon-A peptidase YP_743118.1 2591990 R 187272 CDS YP_743119.1 114321436 4268384 complement(2595034..2596311) 1 NC_008340.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 2596311 clpX 4268384 clpX Alkalilimnicola ehrlichii MLHE-1 ATP-dependent protease ATP-binding subunit ClpX YP_743119.1 2595034 R 187272 CDS YP_743120.1 114321437 4268385 complement(2596514..2597158) 1 NC_008340.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 2597158 clpP 4268385 clpP Alkalilimnicola ehrlichii MLHE-1 ATP-dependent Clp protease proteolytic subunit YP_743120.1 2596514 R 187272 CDS YP_743121.1 114321438 4268386 complement(2597165..2598517) 1 NC_008340.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 2598517 tig 4268386 tig Alkalilimnicola ehrlichii MLHE-1 trigger factor YP_743121.1 2597165 R 187272 CDS YP_743122.1 114321439 4268388 2598754..2599512 1 NC_008340.1 PFAM: protein of unknown function DUF218; KEGG: eca:ECA2551 hypothetical protein; hypothetical protein 2599512 4268388 Mlg_2290 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743122.1 2598754 D 187272 CDS YP_743123.1 114321440 4268389 complement(2600265..2600552) 1 NC_008340.1 PFAM: Excinuclease ABC, C subunit domain protein; KEGG: nha:Nham_0101 excinuclease ABC, C subunit-like; excinuclease ABC subunit C 2600552 4268389 Mlg_2291 Alkalilimnicola ehrlichii MLHE-1 excinuclease ABC subunit C YP_743123.1 2600265 R 187272 CDS YP_743124.1 114321441 4268390 complement(2600586..2601335) 1 NC_008340.1 KEGG: tfu:Tfu_1919 conserved hypothetical protein; hypothetical protein 2601335 4268390 Mlg_2292 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743124.1 2600586 R 187272 CDS YP_743125.1 114321442 4268391 complement(2601815..2603002) 1 NC_008340.1 KEGG: sat:SYN_01816 hypothetical cytosolic protein; hypothetical protein 2603002 4268391 Mlg_2293 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743125.1 2601815 R 187272 CDS YP_743126.1 114321443 4268392 complement(2602999..2606376) 1 NC_008340.1 KEGG: pca:Pcar_1809 hypothetical protein; hypothetical protein 2606376 4268392 Mlg_2294 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743126.1 2602999 R 187272 CDS YP_743127.1 114321444 4268393 complement(2606394..2606993) 1 NC_008340.1 KEGG: sat:SYN_01818 hypothetical cytosolic protein; hypothetical protein 2606993 4268393 Mlg_2295 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743127.1 2606394 R 187272 CDS YP_743128.1 114321445 4268394 complement(2606998..2608434) 1 NC_008340.1 KEGG: sat:SYN_01819 hypothetical cytosolic protein; hypothetical protein 2608434 4268394 Mlg_2296 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743128.1 2606998 R 187272 CDS YP_743129.1 114321446 4268395 2608491..2609039 1 NC_008340.1 hypothetical protein 2609039 4268395 Mlg_2297 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743129.1 2608491 D 187272 CDS YP_743130.1 114321447 4268396 2609445..2610575 1 NC_008340.1 PFAM: AAA-4 family protein; KEGG: cch:Cag_1221 transcriptional regulator; transcriptional regulator 2610575 4268396 Mlg_2298 Alkalilimnicola ehrlichii MLHE-1 transcriptional regulator YP_743130.1 2609445 D 187272 CDS YP_743131.1 114321448 4268397 2610572..2611543 1 NC_008340.1 PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: fra:Francci3_4507 cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase 2611543 4268397 Mlg_2299 Alkalilimnicola ehrlichii MLHE-1 cobyrinic acid a,c-diamide synthase YP_743131.1 2610572 D 187272 CDS YP_743132.1 114321449 4268398 2612295..2612546 1 NC_008340.1 PFAM: helix-turn-helix domain protein; KEGG: rru:Rru_A2442 transcriptional regulator, XRE family; XRE family transcriptional regulator 2612546 4268398 Mlg_2300 Alkalilimnicola ehrlichii MLHE-1 XRE family transcriptional regulator YP_743132.1 2612295 D 187272 CDS YP_743133.1 114321450 4268399 2612546..2613859 1 NC_008340.1 PFAM: HipA domain protein; KEGG: rru:Rru_A2443 HipA protein; HipA domain-containing protein 2613859 4268399 Mlg_2301 Alkalilimnicola ehrlichii MLHE-1 HipA domain-containing protein YP_743133.1 2612546 D 187272 CDS YP_743134.1 114321451 4268400 2614438..2615559 1 NC_008340.1 hypothetical protein 2615559 4268400 Mlg_2302 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743134.1 2614438 D 187272 CDS YP_743135.1 114321452 4268403 2616556..2616852 1 NC_008340.1 hypothetical protein 2616852 4268403 Mlg_2305 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743135.1 2616556 D 187272 CDS YP_743136.1 114321453 4268404 2616849..2617250 1 NC_008340.1 KEGG: chy:CHY_1722 PIN domain protein; twitching motility protein PilT 2617250 4268404 Mlg_2306 Alkalilimnicola ehrlichii MLHE-1 twitching motility protein PilT YP_743136.1 2616849 D 187272 CDS YP_743137.1 114321454 4268405 2618091..2618705 1 NC_008340.1 KEGG: sat:SYN_00015 transcriptional regulator with HTH domain; hypothetical protein 2618705 4268405 Mlg_2307 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743137.1 2618091 D 187272 CDS YP_743138.1 114321455 4268406 2618702..2619139 1 NC_008340.1 hypothetical protein 2619139 4268406 Mlg_2308 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743138.1 2618702 D 187272 CDS YP_743139.1 114321456 4268407 2619747..2619953 1 NC_008340.1 KEGG: rru:Rru_A1247 transcriptional regulator, XRE family; XRE family transcriptional regulator 2619953 4268407 Mlg_2309 Alkalilimnicola ehrlichii MLHE-1 XRE family transcriptional regulator YP_743139.1 2619747 D 187272 CDS YP_743140.1 114321457 4268408 2619943..2620185 1 NC_008340.1 KEGG: noc:Noc_2931 hypothetical protein; hypothetical protein 2620185 4268408 Mlg_2310 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743140.1 2619943 D 187272 CDS YP_743141.1 114321458 4268409 2620335..2620766 1 NC_008340.1 KEGG: plt:Plut_0831 hypothetical protein; hypothetical protein 2620766 4268409 Mlg_2311 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743141.1 2620335 D 187272 CDS YP_743142.1 114321459 4270567 2620763..2622097 1 NC_008340.1 KEGG: plt:Plut_0830 hypothetical protein; hypothetical protein 2622097 4270567 Mlg_2312 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743142.1 2620763 D 187272 CDS YP_743143.1 114321460 4270568 2622649..2624031 1 NC_008340.1 PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: sde:Sde_2114 chorismate mutase, gamma, beta and epsilon; RNA-metabolising metallo-beta-lactamase 2624031 4270568 Mlg_2313 Alkalilimnicola ehrlichii MLHE-1 RNA-metabolising metallo-beta-lactamase YP_743143.1 2622649 D 187272 CDS YP_743144.1 114321461 4270569 2624658..2625788 1 NC_008340.1 KEGG: dps:DPPB61 hypothetical protein; hypothetical protein 2625788 4270569 Mlg_2314 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743144.1 2624658 D 187272 CDS YP_743145.1 114321462 4270570 2625764..2626354 1 NC_008340.1 KEGG: mhu:Mhun_1079 hypothetical protein; hypothetical protein 2626354 4270570 Mlg_2315 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743145.1 2625764 D 187272 CDS YP_743146.1 114321463 4270571 2626579..2626956 1 NC_008340.1 PFAM: regulatory protein, MarR; KEGG: lic:LIC12206 transcriptional regulator (MarR family); AsnC family transcriptional regulator 2626956 4270571 Mlg_2316 Alkalilimnicola ehrlichii MLHE-1 AsnC family transcriptional regulator YP_743146.1 2626579 D 187272 CDS YP_743147.1 114321464 4270572 2627020..2628123 1 NC_008340.1 TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: pfo:Pfl_4058 dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase 2628123 4270572 Mlg_2317 Alkalilimnicola ehrlichii MLHE-1 dTDP-glucose 4,6-dehydratase YP_743147.1 2627020 D 187272 CDS YP_743148.1 114321465 4270573 2628120..2629040 1 NC_008340.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: pol:Bpro_4021 dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase 2629040 4270573 Mlg_2318 Alkalilimnicola ehrlichii MLHE-1 dTDP-4-dehydrorhamnose reductase YP_743148.1 2628120 D 187272 CDS YP_743149.1 114321466 4270574 2629040..2629921 1 NC_008340.1 TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: pol:Bpro_4018 glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylyltransferase 2629921 4270574 Mlg_2319 Alkalilimnicola ehrlichii MLHE-1 glucose-1-phosphate thymidylyltransferase YP_743149.1 2629040 D 187272 CDS YP_743150.1 114321467 4270575 2629943..2630491 1 NC_008340.1 KEGG: eba:ebA2275 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase 2630491 4270575 Mlg_2320 Alkalilimnicola ehrlichii MLHE-1 dTDP-4-dehydrorhamnose 3,5-epimerase YP_743150.1 2629943 D 187272 CDS YP_743151.1 114321468 4270576 2630746..2632623 1 NC_008340.1 PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: ilo:IL0540 ABC-type multidrug transport system, ATPase and permease components; ABC transporter-like protein 2632623 4270576 Mlg_2321 Alkalilimnicola ehrlichii MLHE-1 ABC transporter-like protein YP_743151.1 2630746 D 187272 CDS YP_743152.1 114321469 4270577 2632647..2633645 1 NC_008340.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: par:Psyc_0653 polysaccharide biosynthesis protein CapD; polysaccharide biosynthesis protein CapD 2633645 4270577 Mlg_2322 Alkalilimnicola ehrlichii MLHE-1 polysaccharide biosynthesis protein CapD YP_743152.1 2632647 D 187272 CDS YP_743153.1 114321470 4270578 2633645..2634805 1 NC_008340.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: par:Psyc_0654 DegT/DnrJ/EryC1/StrS aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase 2634805 4270578 Mlg_2323 Alkalilimnicola ehrlichii MLHE-1 DegT/DnrJ/EryC1/StrS aminotransferase YP_743153.1 2633645 D 187272 CDS YP_743154.1 114321471 4270579 2634802..2635512 1 NC_008340.1 PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; acylneuraminate cytidylyltransferase; KEGG: par:Psyc_0656 acylneuraminate cytidylyltransferase; acylneuraminate cytidylyltransferase 2635512 4270579 Mlg_2324 Alkalilimnicola ehrlichii MLHE-1 acylneuraminate cytidylyltransferase YP_743154.1 2634802 D 187272 CDS YP_743155.1 114321472 4270580 2635515..2636714 1 NC_008340.1 KEGG: par:Psyc_0657 probable polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 2636714 4270580 Mlg_2325 Alkalilimnicola ehrlichii MLHE-1 polysaccharide biosynthesis protein YP_743155.1 2635515 D 187272 CDS YP_743156.1 114321473 4270581 2636800..2637237 1 NC_008340.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sdn:Sden_1284 MaoC-like dehydratase; GCN5-like N-acetyltransferase 2637237 4270581 Mlg_2326 Alkalilimnicola ehrlichii MLHE-1 GCN5-like N-acetyltransferase YP_743156.1 2636800 D 187272 CDS YP_743157.1 114321474 4270582 2637234..2638286 1 NC_008340.1 PFAM: N-acetylneuraminic acid synthase, N-terminal domain; KEGG: cps:CPS_2097 NeuB protein; N-acetylneuraminate synthase 2638286 4270582 Mlg_2327 Alkalilimnicola ehrlichii MLHE-1 N-acetylneuraminate synthase YP_743157.1 2637234 D 187272 CDS YP_743158.1 114321475 4270583 2638471..2639400 1 NC_008340.1 PFAM: sulfotransferase; KEGG: sru:SRU_1002 sulfotransferase domain superfamily; sulfotransferase 2639400 4270583 Mlg_2328 Alkalilimnicola ehrlichii MLHE-1 sulfotransferase YP_743158.1 2638471 D 187272 CDS YP_743159.1 114321476 4269085 complement(2639600..2640658) 1 NC_008340.1 PFAM: Integrase, catalytic region; KEGG: dsy:DSY4578 hypothetical protein; integrase catalytic subunit 2640658 4269085 Mlg_2329 Alkalilimnicola ehrlichii MLHE-1 integrase catalytic subunit YP_743159.1 2639600 R 187272 CDS YP_743160.1 114321477 4269086 complement(2640655..2641146) 1 NC_008340.1 KEGG: sdn:Sden_2169 hypothetical protein; hypothetical protein 2641146 4269086 Mlg_2330 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743160.1 2640655 R 187272 CDS YP_743161.1 114321478 4269087 2641267..2642637 1 NC_008340.1 KEGG: neu:NE1571 hypothetical protein; hypothetical protein 2642637 4269087 Mlg_2331 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743161.1 2641267 D 187272 CDS YP_743162.1 114321479 4269088 2642829..2643956 1 NC_008340.1 PFAM: glycosyl transferase, group 1; KEGG: csa:Csal_1715 glycosyl transferase, group 1; group 1 glycosyl transferase 2643956 4269088 Mlg_2332 Alkalilimnicola ehrlichii MLHE-1 group 1 glycosyl transferase YP_743162.1 2642829 D 187272 CDS YP_743163.1 114321480 4269089 2644053..2644388 1 NC_008340.1 KEGG: sdn:Sden_2169 hypothetical protein; hypothetical protein 2644388 4269089 Mlg_2333 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743163.1 2644053 D 187272 CDS YP_743164.1 114321481 4269090 2644456..2646027 1 NC_008340.1 PFAM: Integrase, catalytic region; KEGG: bha:BH3965 transposase (22); integrase catalytic subunit 2646027 4269090 Mlg_2334 Alkalilimnicola ehrlichii MLHE-1 integrase catalytic subunit YP_743164.1 2644456 D 187272 CDS YP_743165.1 114321482 4269091 2646014..2646160 1 NC_008340.1 hypothetical protein 2646160 4269091 Mlg_2335 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743165.1 2646014 D 187272 CDS YP_743166.1 114321483 4269092 2646220..2646711 1 NC_008340.1 KEGG: sdn:Sden_2169 hypothetical protein; hypothetical protein 2646711 4269092 Mlg_2336 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743166.1 2646220 D 187272 CDS YP_743167.1 114321484 4269093 2646708..2647772 1 NC_008340.1 PFAM: Integrase, catalytic region; KEGG: dsy:DSY4578 hypothetical protein; integrase catalytic subunit 2647772 4269093 Mlg_2337 Alkalilimnicola ehrlichii MLHE-1 integrase catalytic subunit YP_743167.1 2646708 D 187272 CDS YP_743168.1 114321485 4269094 2647964..2649043 1 NC_008340.1 PFAM: glycosyl transferase, group 1; KEGG: par:Psyc_0667 probable glycosyl transferase, group 1; group 1 glycosyl transferase 2649043 4269094 Mlg_2338 Alkalilimnicola ehrlichii MLHE-1 group 1 glycosyl transferase YP_743168.1 2647964 D 187272 CDS YP_743169.1 114321486 4269095 2649043..2650962 1 NC_008340.1 KEGG: reu:Reut_B5373 asparagine synthase, glutamine-hydrolyzing; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase, class-II; asparagine synthase; asparagine synthase 2650962 4269095 Mlg_2339 Alkalilimnicola ehrlichii MLHE-1 asparagine synthase YP_743169.1 2649043 D 187272 CDS YP_743170.1 114321487 4269096 2650964..2652004 1 NC_008340.1 KEGG: tel:tll1203 unknown protein; hypothetical protein 2652004 4269096 Mlg_2340 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743170.1 2650964 D 187272 CDS YP_743171.1 114321488 4269097 2652074..2653213 1 NC_008340.1 PFAM: glycosyl transferase, group 1; KEGG: csa:Csal_1721 glycosyl transferase, group 1; group 1 glycosyl transferase 2653213 4269097 Mlg_2341 Alkalilimnicola ehrlichii MLHE-1 group 1 glycosyl transferase YP_743171.1 2652074 D 187272 CDS YP_743172.1 114321489 4269098 complement(2653230..2654645) 1 NC_008340.1 PFAM: glycosyl transferase, family 4; KEGG: bbr:BB0875 probable glycosyltransferase; glycosyl transferase 2654645 4269098 Mlg_2342 Alkalilimnicola ehrlichii MLHE-1 glycosyl transferase YP_743172.1 2653230 R 187272 CDS YP_743173.1 114321490 4269099 2655371..2656180 1 NC_008340.1 TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase; PFAM: inositol monophosphatase; KEGG: csa:Csal_1672 3'(2'),5'-bisphosphate nucleotidase; 3'(2'),5'-bisphosphate nucleotidase 2656180 4269099 Mlg_2343 Alkalilimnicola ehrlichii MLHE-1 3'(2'),5'-bisphosphate nucleotidase YP_743173.1 2655371 D 187272 CDS YP_743174.1 114321491 4269100 2656205..2657113 1 NC_008340.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 2657113 4269100 Mlg_2344 Alkalilimnicola ehrlichii MLHE-1 sulfate adenylyltransferase subunit 2 YP_743174.1 2656205 D 187272 CDS YP_743175.1 114321492 4269101 2657116..2659032 1 NC_008340.1 KEGG: csa:Csal_1687 sulfate adenylyltransferase, large subunit; TIGRFAM: sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor, GTP-binding; adenylylsulfate kinase; elongation factor Tu, domain 2 protein; sulfate adenylyltransferase subunit 1/adenylylsulfate kinase 2659032 4269101 Mlg_2345 Alkalilimnicola ehrlichii MLHE-1 sulfate adenylyltransferase subunit 1/adenylylsulfate kinase YP_743175.1 2657116 D 187272 CDS YP_743176.1 114321493 4269102 2659069..2660226 1 NC_008340.1 KEGG: mhu:Mhun_0414 ATPase (AAA+ superfamily)-like; AAA family ATPase 2660226 4269102 Mlg_2346 Alkalilimnicola ehrlichii MLHE-1 AAA family ATPase YP_743176.1 2659069 D 187272 CDS YP_743177.1 114321494 4268445 2660335..2662101 1 NC_008340.1 PFAM: Citrate transporter; TrkA-C domain protein; KEGG: noc:Noc_1175 TrkA-C, di- and tricarboxylate transporters; TrkA domain-containing protein 2662101 4268445 Mlg_2347 Alkalilimnicola ehrlichii MLHE-1 TrkA domain-containing protein YP_743177.1 2660335 D 187272 CDS YP_743178.1 114321495 4268446 complement(2662734..2664272) 1 NC_008340.1 KEGG: hch:HCH_02378 hypothetical protein; hypothetical protein 2664272 4268446 Mlg_2348 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743178.1 2662734 R 187272 CDS YP_743179.1 114321496 4268447 2664464..2665447 1 NC_008340.1 PFAM: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; KEGG: ppr:PBPRA1875 hypothetical D-alanyl-D-alanine endopeptidase; peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 2665447 4268447 Mlg_2349 Alkalilimnicola ehrlichii MLHE-1 peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 YP_743179.1 2664464 D 187272 CDS YP_743180.1 114321497 4268448 complement(2665484..2666752) 1 NC_008340.1 PFAM: glycosyl transferase, group 1; KEGG: eba:ebA4292 conserved hypothetical protein, possibly glycosyltransferase; group 1 glycosyl transferase 2666752 4268448 Mlg_2350 Alkalilimnicola ehrlichii MLHE-1 group 1 glycosyl transferase YP_743180.1 2665484 R 187272 CDS YP_743181.1 114321498 4268449 complement(2666742..2667872) 1 NC_008340.1 KEGG: xcb:XC_3634 glycosyltransferase; hypothetical protein 2667872 4268449 Mlg_2351 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743181.1 2666742 R 187272 CDS YP_743182.1 114321499 4268450 complement(2667882..2668835) 1 NC_008340.1 PFAM: glycosyl transferase, family 2; KEGG: ret:RHE_CH03223 glycosyltransferase; glycosyl transferase 2668835 4268450 Mlg_2352 Alkalilimnicola ehrlichii MLHE-1 glycosyl transferase YP_743182.1 2667882 R 187272 CDS YP_743183.1 114321500 4268451 complement(2668832..2669590) 1 NC_008340.1 PFAM: glycosyl transferase, family 2; KEGG: bha:BH3661 teichuronic acid biosynthesis; glycosyl transferase 2669590 4268451 Mlg_2353 Alkalilimnicola ehrlichii MLHE-1 glycosyl transferase YP_743183.1 2668832 R 187272 CDS YP_743184.1 114321501 4268452 2669672..2670565 1 NC_008340.1 PFAM: glycosyl transferase, family 2; KEGG: nha:Nham_3045 glycosyl transferase, family 2; glycosyl transferase 2670565 4268452 Mlg_2354 Alkalilimnicola ehrlichii MLHE-1 glycosyl transferase YP_743184.1 2669672 D 187272 CDS YP_743185.1 114321502 4268453 2670639..2672450 1 NC_008340.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sru:SRU_0598 ABC transporter, multidrug efflux family; ABC transporter-like protein 2672450 4268453 Mlg_2355 Alkalilimnicola ehrlichii MLHE-1 ABC transporter-like protein YP_743185.1 2670639 D 187272 CDS YP_743186.1 114321503 4268454 2672454..2673449 1 NC_008340.1 hypothetical protein 2673449 4268454 Mlg_2356 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743186.1 2672454 D 187272 CDS YP_743187.1 114321504 4268455 2673497..2674897 1 NC_008340.1 PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mta:Moth_0582 oxygen-independent coproporphyrinogen III oxidase; coproporphyrinogen III oxidase, anaerobic 2674897 4268455 Mlg_2357 Alkalilimnicola ehrlichii MLHE-1 coproporphyrinogen III oxidase, anaerobic YP_743187.1 2673497 D 187272 CDS YP_743188.1 114321505 4268456 complement(2674854..2676044) 1 NC_008340.1 KEGG: ret:RHE_PE00036 glycosyltransferase; glycosyltransferase 2676044 4268456 Mlg_2358 Alkalilimnicola ehrlichii MLHE-1 glycosyltransferase YP_743188.1 2674854 R 187272 CDS YP_743189.1 114321506 4268457 complement(2676055..2677287) 1 NC_008340.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: rpa:RPA0983 possible phthalate dioxygenase; Rieske (2Fe-2S) domain-containing protein 2677287 4268457 Mlg_2359 Alkalilimnicola ehrlichii MLHE-1 Rieske (2Fe-2S) domain-containing protein YP_743189.1 2676055 R 187272 CDS YP_743190.1 114321507 4268458 complement(2677284..2678027) 1 NC_008340.1 KEGG: pmt:PMT0107 hypothetical protein; hypothetical protein 2678027 4268458 Mlg_2360 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743190.1 2677284 R 187272 CDS YP_743191.1 114321508 4268459 complement(2678137..2680188) 1 NC_008340.1 PFAM: isochorismatase hydrolase; aldehyde dehydrogenase; KEGG: bbr:BB0641 aldehyde dehydrogenase; aldehyde dehydrogenase 2680188 4268459 Mlg_2361 Alkalilimnicola ehrlichii MLHE-1 aldehyde dehydrogenase YP_743191.1 2678137 R 187272 CDS YP_743192.1 114321509 4268460 complement(2680191..2681339) 1 NC_008340.1 PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: gvi:gll3551 3-isopropylmalate dehydrogenase; isocitrate/isopropylmalate dehydrogenase 2681339 4268460 Mlg_2362 Alkalilimnicola ehrlichii MLHE-1 isocitrate/isopropylmalate dehydrogenase YP_743192.1 2680191 R 187272 CDS YP_743193.1 114321510 4268461 complement(2681475..2682446) 1 NC_008340.1 hypothetical protein 2682446 4268461 Mlg_2363 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743193.1 2681475 R 187272 CDS YP_743194.1 114321511 4270703 complement(2682443..2683438) 1 NC_008340.1 KEGG: bur:Bcep18194_B1165 hypothetical protein; hypothetical protein 2683438 4270703 Mlg_2364 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743194.1 2682443 R 187272 CDS YP_743195.1 114321512 4270704 2683824..2685023 1 NC_008340.1 PFAM: glycosyl transferase, group 1; KEGG: atc:AGR_L_2541 hypothetical protein; group 1 glycosyl transferase 2685023 4270704 Mlg_2365 Alkalilimnicola ehrlichii MLHE-1 group 1 glycosyl transferase YP_743195.1 2683824 D 187272 CDS YP_743196.1 114321513 4270705 2685030..2685737 1 NC_008340.1 PFAM: acylneuraminate cytidylyltransferase; KEGG: pmt:PMT0102 surface polysaccharide biosynthesis protein, possible cytidylyltransferase; acylneuraminate cytidylyltransferase 2685737 4270705 Mlg_2366 Alkalilimnicola ehrlichii MLHE-1 acylneuraminate cytidylyltransferase YP_743196.1 2685030 D 187272 CDS YP_743197.1 114321514 4270706 2685730..2687049 1 NC_008340.1 hypothetical protein 2687049 4270706 Mlg_2367 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743197.1 2685730 D 187272 CDS YP_743198.1 114321515 4270707 2687042..2688079 1 NC_008340.1 KEGG: dvu:DVU0351 cytidine 5'monophosphate N-acetylneuraminic acid synthetase, /polysaccharide biosynthesis protein; cytidine 5'monophosphate N-acetylneuraminic acid synthetase 2688079 4270707 Mlg_2368 Alkalilimnicola ehrlichii MLHE-1 cytidine 5'monophosphate N-acetylneuraminic acid synthetase YP_743198.1 2687042 D 187272 CDS YP_743199.1 114321516 4270708 2688076..2689122 1 NC_008340.1 PFAM: N-acetylneuraminic acid synthase, N-terminal domain; KEGG: hch:HCH_05266 sialic acid synthase; N-acetylneuraminate synthase 2689122 4270708 Mlg_2369 Alkalilimnicola ehrlichii MLHE-1 N-acetylneuraminate synthase YP_743199.1 2688076 D 187272 CDS YP_743200.1 114321517 4270709 complement(2689132..2690253) 1 NC_008340.1 KEGG: cya:CYA_1816 tetratricopeptide repeat protein; capsular polysaccharide biosynthesis protein-like protein 2690253 4270709 Mlg_2370 Alkalilimnicola ehrlichii MLHE-1 capsular polysaccharide biosynthesis protein-like protein YP_743200.1 2689132 R 187272 CDS YP_743201.1 114321518 4270710 complement(2690255..2691061) 1 NC_008340.1 hypothetical protein 2691061 4270710 Mlg_2371 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743201.1 2690255 R 187272 CDS YP_743202.1 114321519 4270711 complement(2691163..2693766) 1 NC_008340.1 hypothetical protein 2693766 4270711 Mlg_2372 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743202.1 2691163 R 187272 CDS YP_743203.1 114321520 4270712 2694767..2695591 1 NC_008340.1 TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase; PFAM: inositol monophosphatase; KEGG: csa:Csal_1672 3'(2'),5'-bisphosphate nucleotidase; 3'(2'),5'-bisphosphate nucleotidase 2695591 4270712 Mlg_2373 Alkalilimnicola ehrlichii MLHE-1 3'(2'),5'-bisphosphate nucleotidase YP_743203.1 2694767 D 187272 CDS YP_743204.1 114321521 4270713 2695699..2696424 1 NC_008340.1 PFAM: GAF domain protein; KEGG: gme:Gmet_2614 GAF sensor protein; GAF sensor protein 2696424 4270713 Mlg_2374 Alkalilimnicola ehrlichii MLHE-1 GAF sensor protein YP_743204.1 2695699 D 187272 CDS YP_743205.1 114321522 4270714 complement(2696662..2696997) 1 NC_008340.1 hypothetical protein 2696997 4270714 Mlg_2375 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743205.1 2696662 R 187272 CDS YP_743206.1 114321523 4270715 complement(2697007..2698353) 1 NC_008340.1 hypothetical protein 2698353 4270715 Mlg_2376 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743206.1 2697007 R 187272 CDS YP_743207.1 114321524 4270716 complement(2698919..2700100) 1 NC_008340.1 TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: bur:Bcep18194_B2633 acetate kinase; acetate kinase 2700100 4270716 Mlg_2377 Alkalilimnicola ehrlichii MLHE-1 acetate kinase YP_743207.1 2698919 R 187272 CDS YP_743208.1 114321525 4270717 complement(2700892..2702301) 1 NC_008340.1 PFAM: phosphate acetyl/butaryl transferase; MaoC domain protein dehydratase; KEGG: rpa:RPA4567 phosphate acetyltransferase; bifunctional enoyl-CoA hydratase/phosphate acetyltransferase 2702301 4270717 Mlg_2378 Alkalilimnicola ehrlichii MLHE-1 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase YP_743208.1 2700892 R 187272 CDS YP_743209.1 114321526 4270718 complement(2702341..2703117) 1 NC_008340.1 [NADH]; PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rpa:RPA4568 enoyl-acyl carrier protein reductase; enoyl-ACP reductase 2703117 4270718 Mlg_2379 Alkalilimnicola ehrlichii MLHE-1 enoyl-ACP reductase YP_743209.1 2702341 R 187272 CDS YP_743210.1 114321527 4270719 complement(2703136..2704893) 1 NC_008340.1 PFAM: alpha/beta hydrolase fold; Poly-beta-hydroxybutyrate polymerase domain protein; KEGG: sil:SPO0112 poly(3-hydroxyalkanoate) polymerase; poly-beta-hydroxybutyrate polymerase domain-containing protein 2704893 4270719 Mlg_2380 Alkalilimnicola ehrlichii MLHE-1 poly-beta-hydroxybutyrate polymerase domain-containing protein YP_743210.1 2703136 R 187272 CDS YP_743211.1 114321528 4270720 complement(2704978..2705841) 1 NC_008340.1 PFAM: MscS Mechanosensitive ion channel; KEGG: sru:SRU_0808 transporter, small conductance mechanosensitive ion channel (MscS) family; mechanosensitive ion channel MscS 2705841 4270720 Mlg_2381 Alkalilimnicola ehrlichii MLHE-1 mechanosensitive ion channel MscS YP_743211.1 2704978 R 187272 CDS YP_743212.1 114321529 4269379 complement(2706512..2707330) 1 NC_008340.1 KEGG: sru:SRU_0809 hypothetical protein; hypothetical protein 2707330 4269379 Mlg_2382 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743212.1 2706512 R 187272 CDS YP_743213.1 114321530 4269380 complement(2707327..2708115) 1 NC_008340.1 PFAM: type II secretion system protein N; KEGG: son:SO0176 general secretion pathway protein N; type II secretion system protein N 2708115 4269380 Mlg_2383 Alkalilimnicola ehrlichii MLHE-1 type II secretion system protein N YP_743213.1 2707327 R 187272 CDS YP_743214.1 114321531 4269381 complement(2708112..2708606) 1 NC_008340.1 PFAM: General secretion pathway M protein; KEGG: hch:HCH_03928 type II secretory pathway, component PulM; general secretion pathway M protein 2708606 4269381 Mlg_2384 Alkalilimnicola ehrlichii MLHE-1 general secretion pathway M protein YP_743214.1 2708112 R 187272 CDS YP_743215.1 114321532 4269382 complement(2708603..2709877) 1 NC_008340.1 TIGRFAM: general secretion pathway protein L; PFAM: General secretion pathway L; KEGG: ilo:IL2018 type II secretory pathway, component PulL; general secretion pathway protein L 2709877 4269382 Mlg_2385 Alkalilimnicola ehrlichii MLHE-1 general secretion pathway protein L YP_743215.1 2708603 R 187272 CDS YP_743216.1 114321533 4269383 complement(2709903..2710721) 1 NC_008340.1 PFAM: General secretion pathway protein K; KEGG: xcb:XC_0746 type II secretion system protein K; general secretion pathway protein K 2710721 4269383 Mlg_2386 Alkalilimnicola ehrlichii MLHE-1 general secretion pathway protein K YP_743216.1 2709903 R 187272 CDS YP_743217.1 114321534 4269384 complement(2710724..2712766) 1 NC_008340.1 PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: son:SO0867 serine protease, subtilase; peptidase S8/S53 subtilisin kexin sedolisin 2712766 4269384 Mlg_2387 Alkalilimnicola ehrlichii MLHE-1 peptidase S8/S53 subtilisin kexin sedolisin YP_743217.1 2710724 R 187272 CDS YP_743218.1 114321535 4269385 complement(2712763..2713401) 1 NC_008340.1 TIGRFAM: general secretion pathway protein J; KEGG: pae:PA3098 general secretion pathway protein J; general secretion pathway protein J 2713401 4269385 Mlg_2388 Alkalilimnicola ehrlichii MLHE-1 general secretion pathway protein J YP_743218.1 2712763 R 187272 CDS YP_743219.1 114321536 4269386 complement(2713391..2713840) 1 NC_008340.1 TIGRFAM: general secretion pathway protein I; PFAM: type II secretion system protein I/J; KEGG: cvi:CV3809 general secretion pathway protein I; general secretion pathway protein I 2713840 4269386 Mlg_2389 Alkalilimnicola ehrlichii MLHE-1 general secretion pathway protein I YP_743219.1 2713391 R 187272 CDS YP_743220.1 114321537 4269387 complement(2713833..2714375) 1 NC_008340.1 TIGRFAM: general secretion pathway protein H; Prepilin-type cleavage/methylation-like; KEGG: sdn:Sden_0125 general secretion pathway protein H; general secretion pathway protein H 2714375 4269387 Mlg_2390 Alkalilimnicola ehrlichii MLHE-1 general secretion pathway protein H YP_743220.1 2713833 R 187272 CDS YP_743221.1 114321538 4269388 complement(2714382..2714816) 1 NC_008340.1 TIGRFAM: general secretion pathway protein G; PFAM: II secretion system protein G; KEGG: cvi:CV3811 general secretion pathway protein G; general secretion pathway protein G 2714816 4269388 Mlg_2391 Alkalilimnicola ehrlichii MLHE-1 general secretion pathway protein G YP_743221.1 2714382 R 187272 CDS YP_743222.1 114321539 4269389 complement(2714886..2716100) 1 NC_008340.1 TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; KEGG: son:SO0168 general secretion pathway protein F; general secretion pathway protein F 2716100 4269389 Mlg_2392 Alkalilimnicola ehrlichii MLHE-1 general secretion pathway protein F YP_743222.1 2714886 R 187272 CDS YP_743223.1 114321540 4269390 2716259..2716738 1 NC_008340.1 PFAM: Abortive infection protein; KEGG: pcu:pc0718 hypothetical protein; abortive infection protein 2716738 4269390 Mlg_2393 Alkalilimnicola ehrlichii MLHE-1 abortive infection protein YP_743223.1 2716259 D 187272 CDS YP_743224.1 114321541 4269391 complement(2716823..2719741) 1 NC_008340.1 PFAM: von Willebrand factor, type A; KEGG: mma:MM2478 chloride channel; von Willebrand factor, type A 2719741 4269391 Mlg_2394 Alkalilimnicola ehrlichii MLHE-1 von Willebrand factor, type A YP_743224.1 2716823 R 187272 CDS YP_743225.1 114321542 4269392 complement(2719824..2720627) 1 NC_008340.1 hypothetical protein 2720627 4269392 Mlg_2395 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743225.1 2719824 R 187272 CDS YP_743226.1 114321543 4269393 complement(2720826..2722676) 1 NC_008340.1 KEGG: noc:Noc_0277 possible streptogramin lyase, gluconolactonase; hypothetical protein 2722676 4269393 Mlg_2396 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743226.1 2720826 R 187272 CDS YP_743227.1 114321544 4269394 complement(2722741..2723799) 1 NC_008340.1 PFAM: WD40 domain protein beta Propeller; KEGG: gsu:GSU0025 tolB protein; WD40 domain-containing protein 2723799 4269394 Mlg_2397 Alkalilimnicola ehrlichii MLHE-1 WD40 domain-containing protein YP_743227.1 2722741 R 187272 CDS YP_743228.1 114321545 4269395 complement(2723792..2724118) 1 NC_008340.1 hypothetical protein 2724118 4269395 Mlg_2398 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743228.1 2723792 R 187272 CDS YP_743229.1 114321546 4269986 complement(2724552..2726099) 1 NC_008340.1 KEGG: pae:PA3103 general secretion pathway protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase; general secretory pathway protein E 2726099 4269986 Mlg_2399 Alkalilimnicola ehrlichii MLHE-1 general secretory pathway protein E YP_743229.1 2724552 R 187272 CDS YP_743230.1 114321547 4269987 2726255..2728150 1 NC_008340.1 hypothetical protein 2728150 4269987 Mlg_2400 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743230.1 2726255 D 187272 CDS YP_743231.1 114321548 4269988 complement(2728254..2730275) 1 NC_008340.1 TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: sde:Sde_3580 helix-turn-helix, AraC type; general secretion pathway protein D 2730275 4269988 Mlg_2401 Alkalilimnicola ehrlichii MLHE-1 general secretion pathway protein D YP_743231.1 2728254 R 187272 CDS YP_743232.1 114321549 4269989 complement(2730272..2731258) 1 NC_008340.1 TIGRFAM: general secretion pathway protein C; KEGG: son:SO0165 general secretion pathway protein C; general secretion pathway protein C 2731258 4269989 Mlg_2402 Alkalilimnicola ehrlichii MLHE-1 general secretion pathway protein C YP_743232.1 2730272 R 187272 CDS YP_743233.1 114321550 4269990 2731396..2732133 1 NC_008340.1 KEGG: ppu:PP0622 competence lipoprotein ComL; DNA uptake lipoprotein-like protein 2732133 4269990 Mlg_2403 Alkalilimnicola ehrlichii MLHE-1 DNA uptake lipoprotein-like protein YP_743233.1 2731396 D 187272 CDS YP_743234.1 114321551 4269991 complement(2732130..2733035) 1 NC_008340.1 PFAM: alpha/beta hydrolase fold; KEGG: rme:Rmet_0084 alpha/beta hydrolase fold; alpha/beta hydrolase 2733035 4269991 Mlg_2404 Alkalilimnicola ehrlichii MLHE-1 alpha/beta hydrolase YP_743234.1 2732130 R 187272 CDS YP_743235.1 114321552 4269992 2733062..2734270 1 NC_008340.1 PFAM: regulatory protein, LuxR; KEGG: ppr:PBPRB1591 hypothetical protein; LuxR family transcriptional regulator 2734270 4269992 Mlg_2405 Alkalilimnicola ehrlichii MLHE-1 LuxR family transcriptional regulator YP_743235.1 2733062 D 187272 CDS YP_743236.1 114321553 4269993 2734410..2736473 1 NC_008340.1 hypothetical protein 2736473 4269993 Mlg_2406 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743236.1 2734410 D 187272 CDS YP_743237.1 114321554 4269994 complement(2736549..2739029) 1 NC_008340.1 PFAM: protein of unknown function DUF214; KEGG: bbr:BB3420 inner membrane transport permease; hypothetical protein 2739029 4269994 Mlg_2407 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743237.1 2736549 R 187272 CDS YP_743238.1 114321555 4269995 complement(2739026..2739685) 1 NC_008340.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pfo:Pfl_4015 ABC transporter-like; ABC transporter-like protein 2739685 4269995 Mlg_2408 Alkalilimnicola ehrlichii MLHE-1 ABC transporter-like protein YP_743238.1 2739026 R 187272 CDS YP_743239.1 114321556 4269996 2739759..2740373 1 NC_008340.1 PFAM: lipolytic enzyme, G-D-S-L family; KEGG: noc:Noc_0429 arylesterase; arylesterase 2740373 4269996 Mlg_2409 Alkalilimnicola ehrlichii MLHE-1 arylesterase YP_743239.1 2739759 D 187272 CDS YP_743240.2 161484716 4269997 complement(2740630..2741628) 1 NC_008340.1 Required for efficient pilin antigenic variation; recombination associated protein 2741628 rdgC 4269997 rdgC Alkalilimnicola ehrlichii MLHE-1 recombination associated protein YP_743240.2 2740630 R 187272 CDS YP_743241.1 114321558 4269998 complement(2742359..2742811) 1 NC_008340.1 PFAM: TspO/MBR family protein; KEGG: ret:RHE_PE00375 tryptophan rich sensory protein; TspO and MBR like proteins 2742811 4269998 Mlg_2411 Alkalilimnicola ehrlichii MLHE-1 TspO and MBR like proteins YP_743241.1 2742359 R 187272 CDS YP_743242.1 114321559 4269999 2743624..2745141 1 NC_008340.1 TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha subunit; hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyases tartrate/fumarate alpha region; Fe-S type hydro-lyases tartrate/fumarate beta region; KEGG: csa:Csal_1834 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region; fumarase 2745141 4269999 Mlg_2412 Alkalilimnicola ehrlichii MLHE-1 fumarase YP_743242.1 2743624 D 187272 CDS YP_743243.1 114321560 4270000 2745289..2746080 1 NC_008340.1 KEGG: eba:ebA4859 predicted integral membrane protein; hypothetical protein 2746080 4270000 Mlg_2413 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743243.1 2745289 D 187272 CDS YP_743244.1 114321561 4270001 complement(2746292..2747524) 1 NC_008340.1 PFAM: cyclic nucleotide-binding; KEGG: hch:HCH_05853 predicted signal transduction protein; cyclic nucleotide-binding protein 2747524 4270001 Mlg_2414 Alkalilimnicola ehrlichii MLHE-1 cyclic nucleotide-binding protein YP_743244.1 2746292 R 187272 CDS YP_743245.1 114321562 4270002 2747674..2748144 1 NC_008340.1 PFAM: peptidylprolyl isomerase, FKBP-type; KEGG: noc:Noc_1086 peptidylprolyl isomerase, FKBP-type; FKBP-type peptidylprolyl isomerase 2748144 4270002 Mlg_2415 Alkalilimnicola ehrlichii MLHE-1 FKBP-type peptidylprolyl isomerase YP_743245.1 2747674 D 187272 CDS YP_743246.1 114321563 4270003 complement(2748268..2748606) 1 NC_008340.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: pae:PA3347 hypothetical protein; anti-sigma-factor antagonist 2748606 4270003 Mlg_2416 Alkalilimnicola ehrlichii MLHE-1 anti-sigma-factor antagonist YP_743246.1 2748268 R 187272 CDS YP_743247.1 114321564 4269482 complement(2748647..2748856) 1 NC_008340.1 PFAM: protein of unknown function DUF1458; KEGG: csa:Csal_2871 protein of unknown function DUF1458; hypothetical protein 2748856 4269482 Mlg_2417 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743247.1 2748647 R 187272 CDS YP_743248.1 114321565 4269483 complement(2748915..2749520) 1 NC_008340.1 PFAM: isochorismatase hydrolase; KEGG: pae:PA3846 hypothetical protein; isochorismatase hydrolase 2749520 4269483 Mlg_2418 Alkalilimnicola ehrlichii MLHE-1 isochorismatase hydrolase YP_743248.1 2748915 R 187272 CDS YP_743249.1 114321566 4269484 complement(2749926..2750426) 1 NC_008340.1 PFAM: outer membrane lipoprotein Slp; KEGG: vvy:VV1051 starvation-inducible outer membrane lipoprotein; outer membrane lipoprotein Slp 2750426 4269484 Mlg_2419 Alkalilimnicola ehrlichii MLHE-1 outer membrane lipoprotein Slp YP_743249.1 2749926 R 187272 CDS YP_743250.1 114321567 4269485 complement(2750438..2750983) 1 NC_008340.1 PFAM: outer membrane lipoprotein Slp; KEGG: noc:Noc_1325 outer membrane lipoprotein Slp; outer membrane lipoprotein Slp 2750983 4269485 Mlg_2420 Alkalilimnicola ehrlichii MLHE-1 outer membrane lipoprotein Slp YP_743250.1 2750438 R 187272 CDS YP_743251.1 114321568 4269486 complement(2751028..2751660) 1 NC_008340.1 PFAM: carbonic anhydrase; KEGG: xac:XAC1604 carbonic anhydrase; carbonate dehydratase 2751660 4269486 Mlg_2421 Alkalilimnicola ehrlichii MLHE-1 carbonate dehydratase YP_743251.1 2751028 R 187272 CDS YP_743252.1 114321569 4269487 complement(2751761..2752525) 1 NC_008340.1 KEGG: plt:Plut_1005 ATPase, ParA family; ParaA family ATPase 2752525 4269487 Mlg_2422 Alkalilimnicola ehrlichii MLHE-1 ParaA family ATPase YP_743252.1 2751761 R 187272 CDS YP_743253.1 114321570 4269488 complement(2752573..2753496) 1 NC_008340.1 PFAM: CHAD domain containing protein; KEGG: csa:Csal_2889 hypothetical protein; CHAD domain-containing protein 2753496 4269488 Mlg_2423 Alkalilimnicola ehrlichii MLHE-1 CHAD domain-containing protein YP_743253.1 2752573 R 187272 CDS YP_743254.1 114321571 4269489 complement(2753612..2755630) 1 NC_008340.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ppu:PP0196 ABC transporter, ATP-binding protein; ABC transporter-like protein 2755630 4269489 Mlg_2424 Alkalilimnicola ehrlichii MLHE-1 ABC transporter-like protein YP_743254.1 2753612 R 187272 CDS YP_743255.1 114321572 4269490 2756044..2757153 1 NC_008340.1 TIGRFAM: formate dehydrogenase, gamma subunit; PFAM: cytochrome B561; KEGG: csa:Csal_1917 formate dehydrogenase, gamma subunit; formate dehydrogenase gamma subunit 2757153 4269490 Mlg_2425 Alkalilimnicola ehrlichii MLHE-1 formate dehydrogenase gamma subunit YP_743255.1 2756044 D 187272 CDS YP_743256.1 114321573 4269491 2757424..2759904 1 NC_008340.1 TIGRFAM: Twin-arginine translocation pathway signal; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: dsy:DSY4131 anaerobic dehydrogenase; molybdopterin oxidoreductase 2759904 4269491 Mlg_2426 Alkalilimnicola ehrlichii MLHE-1 molybdopterin oxidoreductase YP_743256.1 2757424 D 187272 CDS YP_743257.1 114321574 4269492 2759929..2760675 1 NC_008340.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: sth:STH2083 molybdopterin oxidoreductase iron-sulfur binding subunit; 4Fe-4S ferredoxin 2760675 4269492 Mlg_2427 Alkalilimnicola ehrlichii MLHE-1 4Fe-4S ferredoxin YP_743257.1 2759929 D 187272 CDS YP_743258.1 114321575 4269493 2760677..2761510 1 NC_008340.1 hypothetical protein 2761510 4269493 Mlg_2428 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743258.1 2760677 D 187272 CDS YP_743259.1 114321576 4269494 complement(2761584..2763026) 1 NC_008340.1 KEGG: mca:MCA2070 sensory box protein; TIGRFAM: metal dependent phophohydrolase; PFAM: response regulator receiver; metal-dependent phosphohydrolase, HD sub domain; HDIG domain protein; SMART: metal-dependent phosphohydrolase, HD region; response regulator receiver modulated metal dependent phosphohydrolase 2763026 4269494 Mlg_2429 Alkalilimnicola ehrlichii MLHE-1 response regulator receiver modulated metal dependent phosphohydrolase YP_743259.1 2761584 R 187272 CDS YP_743260.1 114321577 4269495 complement(2763023..2764912) 1 NC_008340.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: dar:Daro_1009 response regulator receiver:ATP-binding region, ATPase-like:histidine kinase A, N-terminal; histidine kinase 2764912 4269495 Mlg_2430 Alkalilimnicola ehrlichii MLHE-1 histidine kinase YP_743260.1 2763023 R 187272 CDS YP_743261.1 114321578 4269496 complement(2764983..2765297) 1 NC_008340.1 KEGG: csa:Csal_2967 hypothetical protein; hypothetical protein 2765297 4269496 Mlg_2431 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743261.1 2764983 R 187272 CDS YP_743262.1 114321579 4269497 complement(2765294..2765680) 1 NC_008340.1 KEGG: nme:NMB0979 hypothetical protein; hypothetical protein 2765680 4269497 Mlg_2432 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743262.1 2765294 R 187272 CDS YP_743263.1 114321580 4269498 complement(2765734..2766609) 1 NC_008340.1 TIGRFAM: biotin biosynthesis protein BioC; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: tbd:Tbd_0322 biotin biosynthesis protein BioC; biotin biosynthesis protein BioC 2766609 4269498 Mlg_2433 Alkalilimnicola ehrlichii MLHE-1 biotin biosynthesis protein BioC YP_743263.1 2765734 R 187272 CDS YP_743264.1 114321581 4268740 complement(2766606..2767367) 1 NC_008340.1 PFAM: alpha/beta hydrolase fold; KEGG: xcb:XC_0397 biotin biosynthesis protein; alpha/beta hydrolase 2767367 4268740 Mlg_2434 Alkalilimnicola ehrlichii MLHE-1 alpha/beta hydrolase YP_743264.1 2766606 R 187272 CDS YP_743265.1 114321582 4268741 complement(2767364..2768539) 1 NC_008340.1 KEGG: mca:MCA1126 8-amino-7-oxononanoate synthase; TIGRFAM: 8-amino-7-oxononanoate synthase; PFAM: aminotransferase, class I and II; 8-amino-7-oxononanoate synthase 2768539 4268741 Mlg_2435 Alkalilimnicola ehrlichii MLHE-1 8-amino-7-oxononanoate synthase YP_743265.1 2767364 R 187272 CDS YP_743266.1 114321583 4268742 complement(2768536..2769549) 1 NC_008340.1 KEGG: xcv:XCV0403 biotin synthase BioB; TIGRFAM: biotin synthase; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB; biotin synthase 2769549 4268742 Mlg_2436 Alkalilimnicola ehrlichii MLHE-1 biotin synthase YP_743266.1 2768536 R 187272 CDS YP_743267.1 114321584 4268743 2769921..2770709 1 NC_008340.1 KEGG: mca:MCA1124 competence protein F; competence protein F 2770709 4268743 Mlg_2437 Alkalilimnicola ehrlichii MLHE-1 competence protein F YP_743267.1 2769921 D 187272 CDS YP_743268.1 114321585 4268744 complement(2770712..2771593) 1 NC_008340.1 catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate, as part of the ubiquinone biosynthesis pathway; 4-hydroxybenzoate octaprenyltransferase 2771593 ubiA 4268744 ubiA Alkalilimnicola ehrlichii MLHE-1 4-hydroxybenzoate octaprenyltransferase YP_743268.1 2770712 R 187272 CDS YP_743269.1 114321586 4268745 complement(2771599..2772147) 1 NC_008340.1 PFAM: Chorismate lyase; KEGG: eba:ebA2295 chorismate:pyruvate lyase, 4-hydroxybenzoate synthetase; chorismate lyase 2772147 4268745 Mlg_2439 Alkalilimnicola ehrlichii MLHE-1 chorismate lyase YP_743269.1 2771599 R 187272 CDS YP_743270.1 114321587 4268746 complement(2772422..2774539) 1 NC_008340.1 catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 2774539 4268746 Mlg_2440 Alkalilimnicola ehrlichii MLHE-1 ATP-dependent DNA helicase RecG YP_743270.1 2772422 R 187272 CDS YP_743271.1 114321588 4268747 complement(2774804..2775187) 1 NC_008340.1 TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: mca:MCA2024 endoribonuclease L-PSP; endoribonuclease L-PSP 2775187 4268747 Mlg_2441 Alkalilimnicola ehrlichii MLHE-1 endoribonuclease L-PSP YP_743271.1 2774804 R 187272 CDS YP_743272.1 114321589 4268748 complement(2775214..2777406) 1 NC_008340.1 KEGG: pae:PA5338 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase, HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase, HD region; (p)ppGpp synthetase I SpoT/RelA 2777406 4268748 Mlg_2442 Alkalilimnicola ehrlichii MLHE-1 (p)ppGpp synthetase I SpoT/RelA YP_743272.1 2775214 R 187272 CDS YP_743273.1 114321590 4268749 complement(2777420..2777743) 1 NC_008340.1 Promotes RNA polymerase assembly; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega 2777743 rpoZ 4268749 rpoZ Alkalilimnicola ehrlichii MLHE-1 DNA-directed RNA polymerase subunit omega YP_743273.1 2777420 R 187272 CDS YP_743274.1 114321591 4268750 complement(2778373..2778984) 1 NC_008340.1 KEGG: ppu:PP5296 guanylate kinase; PFAM: guanylate kinase; SMART: guanylate kinase/L-type calcium channel region; guanylate kinase 2778984 4268750 Mlg_2444 Alkalilimnicola ehrlichii MLHE-1 guanylate kinase YP_743274.1 2778373 R 187272 CDS YP_743275.1 114321592 4268751 complement(2779310..2780176) 1 NC_008340.1 TIGRFAM: conserved hypothetical protein; PFAM: YicC N-terminal domain protein; domain of unknown function DUF1732; KEGG: sfx:S4085 alpha helix protein; hypothetical protein 2780176 4268751 Mlg_2445 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743275.1 2779310 R 187272 CDS YP_743276.1 114321593 4268752 2780583..2781299 1 NC_008340.1 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH 2781299 rph 4268752 rph Alkalilimnicola ehrlichii MLHE-1 ribonuclease PH YP_743276.1 2780583 D 187272 CDS YP_743277.1 114321594 4268753 2781345..2781956 1 NC_008340.1 TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein; KEGG: sde:Sde_3647 ribosomal protein L33; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase 2781956 4268753 Mlg_2447 Alkalilimnicola ehrlichii MLHE-1 RdgB/HAM1 family non-canonical purine NTP pyrophosphatase YP_743277.1 2781345 D 187272 CDS YP_743278.1 114321595 4268754 2781953..2783149 1 NC_008340.1 KEGG: xcb:XC_0963 oxidoreductase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; coproporphyrinogen III oxidase, anaerobic 2783149 4268754 Mlg_2448 Alkalilimnicola ehrlichii MLHE-1 coproporphyrinogen III oxidase, anaerobic YP_743278.1 2781953 D 187272 CDS YP_743279.1 114321596 4268755 2783193..2783390 1 NC_008340.1 KEGG: pfl:PFL_5128 hypothetical protein; hypothetical protein 2783390 4268755 Mlg_2449 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743279.1 2783193 D 187272 CDS YP_743280.1 114321597 4268756 2783383..2783634 1 NC_008340.1 transcriptional antiterminator, Rof 2783634 4268756 Mlg_2450 Alkalilimnicola ehrlichii MLHE-1 transcriptional antiterminator, Rof YP_743280.1 2783383 D 187272 CDS YP_743281.1 114321598 4268757 2783702..2786110 1 NC_008340.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: pae:PA0575 hypothetical protein; periplasmic sensor diguanylate cyclase/phosphodiesterase 2786110 4268757 Mlg_2451 Alkalilimnicola ehrlichii MLHE-1 periplasmic sensor diguanylate cyclase/phosphodiesterase YP_743281.1 2783702 D 187272 CDS YP_743282.1 114321599 4270193 complement(2786273..2787586) 1 NC_008340.1 KEGG: dar:Daro_1338 acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase-like protein; acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase-like protein 2787586 4270193 Mlg_2452 Alkalilimnicola ehrlichii MLHE-1 acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase-like protein YP_743282.1 2786273 R 187272 CDS YP_743283.1 114321600 4270194 complement(2787602..2789005) 1 NC_008340.1 PFAM: Amidase; KEGG: bbr:BB4925 amidase; amidase 2789005 4270194 Mlg_2453 Alkalilimnicola ehrlichii MLHE-1 amidase YP_743283.1 2787602 R 187272 CDS YP_743284.1 114321601 4270195 complement(2789078..2790343) 1 NC_008340.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: dar:Daro_1358 Rieske (2Fe-2S) region; Rieske (2Fe-2S) domain-containing protein 2790343 4270195 Mlg_2454 Alkalilimnicola ehrlichii MLHE-1 Rieske (2Fe-2S) domain-containing protein YP_743284.1 2789078 R 187272 CDS YP_743285.1 114321602 4270196 complement(2790465..2791061) 1 NC_008340.1 KEGG: bpe:BP1562 hypothetical protein; hypothetical protein 2791061 4270196 Mlg_2455 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743285.1 2790465 R 187272 CDS YP_743286.1 114321603 4270197 2791224..2792060 1 NC_008340.1 PFAM: alpha/beta hydrolase fold; KEGG: dar:Daro_3786 alpha/beta hydrolase fold; alpha/beta hydrolase 2792060 4270197 Mlg_2456 Alkalilimnicola ehrlichii MLHE-1 alpha/beta hydrolase YP_743286.1 2791224 D 187272 CDS YP_743287.1 114321604 4270198 2792087..2792722 1 NC_008340.1 PFAM: HesB/YadR/YfhF-family protein; nitrogen-fixing NifU domain protein; KEGG: ilo:IL0248 hypothetical protein; HesB/YadR/YfhF-family protein 2792722 4270198 Mlg_2457 Alkalilimnicola ehrlichii MLHE-1 HesB/YadR/YfhF-family protein YP_743287.1 2792087 D 187272 CDS YP_743288.1 114321605 4270199 complement(2792799..2793674) 1 NC_008340.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bja:bll5282 biphenyl-2,3-diol 1,2-dioxygenase; biphenyl-2,3-diol 1,2-dioxygenase 2793674 4270199 Mlg_2458 Alkalilimnicola ehrlichii MLHE-1 biphenyl-2,3-diol 1,2-dioxygenase YP_743288.1 2792799 R 187272 CDS YP_743289.1 114321606 4270200 complement(2793726..2794784) 1 NC_008340.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: dar:Daro_1359 oxidoreductase FAD/NAD(P)-binding:oxidoreductase FAD-binding region; oxidoreductase FAD-binding subunit 2794784 4270200 Mlg_2459 Alkalilimnicola ehrlichii MLHE-1 oxidoreductase FAD-binding subunit YP_743289.1 2793726 R 187272 CDS YP_743290.1 114321607 4270201 2794996..2795778 1 NC_008340.1 PFAM: Hydratase/decarboxylase; KEGG: bur:Bcep18194_B2961 4-oxalocrotonate decarboxylase; 4-oxalocrotonate decarboxylase 2795778 4270201 Mlg_2460 Alkalilimnicola ehrlichii MLHE-1 4-oxalocrotonate decarboxylase YP_743290.1 2794996 D 187272 CDS YP_743291.1 114321608 4270202 2795811..2796713 1 NC_008340.1 catalyzes the formation of acetyl-CoA from acetalaldehyde; acetaldehyde dehydrogenase 2796713 4270202 Mlg_2461 Alkalilimnicola ehrlichii MLHE-1 acetaldehyde dehydrogenase YP_743291.1 2795811 D 187272 CDS YP_743292.1 114321609 4270203 2796724..2797752 1 NC_008340.1 catalyzes the formation of pyruvate and acetaldehyde from 4-hydroxy-2-ketovaleric acid; involved in the degradation of phenylpropionate; 4-hydroxy-2-ketovalerate aldolase 2797752 4270203 Mlg_2462 Alkalilimnicola ehrlichii MLHE-1 4-hydroxy-2-ketovalerate aldolase YP_743292.1 2796724 D 187272 CDS YP_743293.1 114321610 4270204 2797814..2798422 1 NC_008340.1 PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: tcx:Tcr_2059 (acyl-carrier protein) phosphodiesterase; ACP phosphodiesterase 2798422 4270204 Mlg_2463 Alkalilimnicola ehrlichii MLHE-1 ACP phosphodiesterase YP_743293.1 2797814 D 187272 CDS YP_743294.1 114321611 4270205 complement(2798566..2799312) 1 NC_008340.1 TIGRFAM: Glutaredoxin-family domain protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; glutaredoxin; Redoxin domain protein; KEGG: ava:Ava_4981 glutaredoxin-like region; glutaredoxin family protein 2799312 4270205 Mlg_2464 Alkalilimnicola ehrlichii MLHE-1 glutaredoxin family protein YP_743294.1 2798566 R 187272 CDS YP_743295.1 114321612 4270206 complement(2799451..2800716) 1 NC_008340.1 KEGG: dar:Daro_1352 hypothetical protein; hypothetical protein 2800716 4270206 Mlg_2465 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743295.1 2799451 R 187272 CDS YP_743296.1 114321613 4270207 complement(2800737..2802275) 1 NC_008340.1 KEGG: dar:Daro_1351 probable regulatory protein, LysR; regulatory protein, LysR 2802275 4270207 Mlg_2466 Alkalilimnicola ehrlichii MLHE-1 regulatory protein, LysR YP_743296.1 2800737 R 187272 CDS YP_743297.1 114321614 4270208 complement(2802324..2804702) 1 NC_008340.1 KEGG: dar:Daro_1350 exporters of the RND superfamily; RND efflux transporter 2804702 4270208 Mlg_2467 Alkalilimnicola ehrlichii MLHE-1 RND efflux transporter YP_743297.1 2802324 R 187272 CDS YP_743298.1 114321615 4270209 complement(2804709..2805824) 1 NC_008340.1 PFAM: glycosyl hydrolase, BNR repeat-containing protein; KEGG: dar:Daro_1349 glycosyl hydrolase, BNR repeat; BNR repeat-containing glycosyl hydrolase 2805824 4270209 Mlg_2468 Alkalilimnicola ehrlichii MLHE-1 BNR repeat-containing glycosyl hydrolase YP_743298.1 2804709 R 187272 CDS YP_743299.1 114321616 4268410 2806171..2806773 1 NC_008340.1 PFAM: regulatory protein, MarR; helix-turn-helix, HxlR type; KEGG: dar:Daro_1332 hypothetical protein; transcriptional regulator 2806773 4268410 Mlg_2469 Alkalilimnicola ehrlichii MLHE-1 transcriptional regulator YP_743299.1 2806171 D 187272 CDS YP_743300.1 114321617 4268411 2806884..2807507 1 NC_008340.1 PFAM: regulatory protein, MarR; KEGG: dar:Daro_1332 hypothetical protein; transcriptional regulator 2807507 4268411 Mlg_2470 Alkalilimnicola ehrlichii MLHE-1 transcriptional regulator YP_743300.1 2806884 D 187272 CDS YP_743301.1 114321618 4268412 complement(2807570..2809069) 1 NC_008340.1 PFAM: carboxyl transferase; malonate decarboxylase gamma subunit; KEGG: rfr:Rfer_1845 acetyl-CoA carboxylase beta subunit; malonate decarboxylase subunit gamma 2809069 4268412 Mlg_2471 Alkalilimnicola ehrlichii MLHE-1 malonate decarboxylase subunit gamma YP_743301.1 2807570 R 187272 CDS YP_743302.1 114321619 4268413 complement(2809315..2810292) 1 NC_008340.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mag:amb4555 NADPH:quinone reductase and related Zn-dependent oxidoreductase; alcohol dehydrogenase 2810292 4268413 Mlg_2472 Alkalilimnicola ehrlichii MLHE-1 alcohol dehydrogenase YP_743302.1 2809315 R 187272 CDS YP_743303.1 114321620 4268414 complement(2810354..2811232) 1 NC_008340.1 TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: dar:Daro_1735 UTP--glucose-1-phosphate uridylyltransferase, bacterial and archaeal type; UDP-glucose pyrophosphorylase 2811232 4268414 Mlg_2473 Alkalilimnicola ehrlichii MLHE-1 UDP-glucose pyrophosphorylase YP_743303.1 2810354 R 187272 CDS YP_743304.1 114321621 4268415 complement(2811289..2815176) 1 NC_008340.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase 2815176 4268415 Mlg_2474 Alkalilimnicola ehrlichii MLHE-1 phosphoribosylformylglycinamidine synthase YP_743304.1 2811289 R 187272 CDS YP_743305.1 114321622 4268416 complement(2815200..2816240) 1 NC_008340.1 KEGG: dar:Daro_0847 NlpBDapX lipoprotein; NlpBDapX lipoprotein 2816240 4268416 Mlg_2475 Alkalilimnicola ehrlichii MLHE-1 NlpBDapX lipoprotein YP_743305.1 2815200 R 187272 CDS YP_743306.1 114321623 4268417 complement(2816253..2817125) 1 NC_008340.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 2817125 4268417 Mlg_2476 Alkalilimnicola ehrlichii MLHE-1 dihydrodipicolinate synthase YP_743306.1 2816253 R 187272 CDS YP_743307.1 114321624 4268418 complement(2817241..2817867) 1 NC_008340.1 hypothetical protein 2817867 4268418 Mlg_2477 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743307.1 2817241 R 187272 CDS YP_743308.1 114321625 4268419 complement(2817886..2818497) 1 NC_008340.1 PFAM: protein of unknown function DUF583; KEGG: csa:Csal_2787 protein of unknown function DUF583; hypothetical protein 2818497 4268419 Mlg_2478 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743308.1 2817886 R 187272 CDS YP_743309.1 114321626 4268420 2818641..2819192 1 NC_008340.1 PFAM: amino acid-binding ACT domain protein; KEGG: hch:HCH_04907 glycine cleavage system regulatory protein; amino acid-binding ACT domain-containing protein 2819192 4268420 Mlg_2479 Alkalilimnicola ehrlichii MLHE-1 amino acid-binding ACT domain-containing protein YP_743309.1 2818641 D 187272 CDS YP_743310.1 114321627 4268421 2819233..2819703 1 NC_008340.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bxe:Bxe_A2391 bacterioferritin comigratory oxidoreductase; redoxin domain-containing protein 2819703 4268421 Mlg_2480 Alkalilimnicola ehrlichii MLHE-1 redoxin domain-containing protein YP_743310.1 2819233 D 187272 CDS YP_743311.1 114321628 4268422 2819748..2821100 1 NC_008340.1 PFAM: PhoH family protein; SMART: Nucleotide binding protein, PINc; KEGG: noc:Noc_1210 PhoH-like protein; PhoH family protein 2821100 4268422 Mlg_2481 Alkalilimnicola ehrlichii MLHE-1 PhoH family protein YP_743311.1 2819748 D 187272 CDS YP_743312.1 114321629 4268423 complement(2821212..2822291) 1 NC_008340.1 PFAM: protein of unknown function UPF0118; KEGG: noc:Noc_0190 protein of unknown function UPF0118; hypothetical protein 2822291 4268423 Mlg_2482 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743312.1 2821212 R 187272 CDS YP_743313.1 114321630 4268424 2822377..2823879 1 NC_008340.1 PFAM: peptidase M48, Ste24p; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; KEGG: noc:Noc_2619 peptidase M48, Ste24p; peptidase M48, Ste24p 2823879 4268424 Mlg_2483 Alkalilimnicola ehrlichii MLHE-1 peptidase M48, Ste24p YP_743313.1 2822377 D 187272 CDS YP_743314.1 114321631 4268425 2823963..2824838 1 NC_008340.1 KEGG: xcb:XC_1958 PHA synthase subunit; hypothetical protein 2824838 4268425 Mlg_2484 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743314.1 2823963 D 187272 CDS YP_743315.1 114321632 4268426 2824835..2825926 1 NC_008340.1 PFAM: alpha/beta hydrolase fold; KEGG: xcv:XCV2209 poly-beta-hydroxybutyrate polymerase; alpha/beta hydrolase 2825926 4268426 Mlg_2485 Alkalilimnicola ehrlichii MLHE-1 alpha/beta hydrolase YP_743315.1 2824835 D 187272 CDS YP_743316.1 114321633 4268427 complement(2826419..2827165) 1 NC_008340.1 TIGRFAM: acetoacetyl-CoA reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; Acetoacetyl-CoA reductase; KEGG: hch:HCH_04996 acetoacetyl-CoA reductase; 3-oxoacyl-ACP reductase 2827165 4268427 Mlg_2486 Alkalilimnicola ehrlichii MLHE-1 3-oxoacyl-ACP reductase YP_743316.1 2826419 R 187272 CDS YP_743317.1 114321634 4270806 complement(2827355..2827888) 1 NC_008340.1 TIGRFAM: polyhydroxyalkanoate synthesis repressor PhaR; PFAM: PHB accumulation regulatory domain protein; PHA accumulation regulator DNA-binding protein; KEGG: xac:XAC2402 hypothetical protein; polyhydroxyalkonate synthesis repressor, PhaR 2827888 4270806 Mlg_2487 Alkalilimnicola ehrlichii MLHE-1 polyhydroxyalkonate synthesis repressor, PhaR YP_743317.1 2827355 R 187272 CDS YP_743318.1 114321635 4270807 2828082..2828909 1 NC_008340.1 KEGG: dar:Daro_1978 HDIG; signal transduction protein 2828909 4270807 Mlg_2488 Alkalilimnicola ehrlichii MLHE-1 signal transduction protein YP_743318.1 2828082 D 187272 CDS YP_743319.1 114321636 4270808 complement(2828953..2830305) 1 NC_008340.1 KEGG: noc:Noc_0255 para-aminobenzoate synthase, component I; TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Anthranilate synthase component I and chorismate binding protein; Anthranilate synthase component I domain protein; aminodeoxychorismate synthase, subunit I 2830305 4270808 Mlg_2489 Alkalilimnicola ehrlichii MLHE-1 aminodeoxychorismate synthase, subunit I YP_743319.1 2828953 R 187272 CDS YP_743320.1 114321637 4270809 2830410..2832155 1 NC_008340.1 PFAM: AMP-dependent synthetase and ligase; KEGG: jan:Jann_1256 AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase 2832155 4270809 Mlg_2490 Alkalilimnicola ehrlichii MLHE-1 AMP-dependent synthetase/ligase YP_743320.1 2830410 D 187272 CDS YP_743321.1 114321638 4270810 2832238..2833278 1 NC_008340.1 PFAM: Patatin; KEGG: bja:bll7964 hypothetical protein; patatin 2833278 4270810 Mlg_2491 Alkalilimnicola ehrlichii MLHE-1 patatin YP_743321.1 2832238 D 187272 CDS YP_743322.1 114321639 4270811 2833335..2834087 1 NC_008340.1 PFAM: protein of unknown function DUF28; KEGG: neu:NE0210 hypothetical protein; hypothetical protein 2834087 4270811 Mlg_2492 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743322.1 2833335 D 187272 CDS YP_743323.1 114321640 4270812 2834087..2834584 1 NC_008340.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 2834584 ruvC 4270812 ruvC Alkalilimnicola ehrlichii MLHE-1 Holliday junction resolvase YP_743323.1 2834087 D 187272 CDS YP_743324.1 114321641 4270813 2834581..2835207 1 NC_008340.1 KEGG: pae:PA0966 Holliday junction DNA helicase RuvA; TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: DNA recombination protein, RuvA; RuvA domain protein; SMART: Helix-hairpin-helix DNA-binding, class 1; Holliday junction DNA helicase RuvA 2835207 4270813 Mlg_2494 Alkalilimnicola ehrlichii MLHE-1 Holliday junction DNA helicase RuvA YP_743324.1 2834581 D 187272 CDS YP_743325.1 114321642 4270814 complement(2835244..2835471) 1 NC_008340.1 KEGG: hch:HCH_02750 hypothetical protein; hypothetical protein 2835471 4270814 Mlg_2495 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743325.1 2835244 R 187272 CDS YP_743326.1 114321643 4270815 complement(2835627..2837843) 1 NC_008340.1 binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA 2837843 4270815 Mlg_2496 Alkalilimnicola ehrlichii MLHE-1 primosome assembly protein PriA YP_743326.1 2835627 R 187272 CDS YP_743327.1 114321644 4270816 2837857..2838528 1 NC_008340.1 PFAM: heat shock protein DnaJ domain protein; KEGG: pae:PA1191 hypothetical protein; molecular chaperone DnaJ 2838528 4270816 Mlg_2497 Alkalilimnicola ehrlichii MLHE-1 molecular chaperone DnaJ YP_743327.1 2837857 D 187272 CDS YP_743328.1 114321645 4270817 2838749..2840062 1 NC_008340.1 PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: tbd:Tbd_2180 long-chain fatty acid transport protein; aromatic hydrocarbon degradation membrane protein 2840062 4270817 Mlg_2498 Alkalilimnicola ehrlichii MLHE-1 aromatic hydrocarbon degradation membrane protein YP_743328.1 2838749 D 187272 CDS YP_743329.1 114321646 4270818 2840103..2840648 1 NC_008340.1 KEGG: tbd:Tbd_0575 hypothetical protein; hypothetical protein 2840648 4270818 Mlg_2499 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743329.1 2840103 D 187272 CDS YP_743330.1 114321647 4270819 2840775..2841416 1 NC_008340.1 PFAM: SirA family protein; KEGG: mag:amb0858 predicted redox protein; SirA family protein 2841416 4270819 Mlg_2500 Alkalilimnicola ehrlichii MLHE-1 SirA family protein YP_743330.1 2840775 D 187272 CDS YP_743331.1 114321648 4270820 complement(2841443..2842669) 1 NC_008340.1 KEGG: pol:Bpro_5280 hypothetical protein; hypothetical protein 2842669 4270820 Mlg_2501 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743331.1 2841443 R 187272 CDS YP_743332.1 114321649 4270821 2842900..2843949 1 NC_008340.1 KEGG: hma:rrnAC1162 hypothetical protein; hypothetical protein 2843949 4270821 Mlg_2502 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743332.1 2842900 D 187272 CDS YP_743333.1 114321650 4270822 2843933..2844472 1 NC_008340.1 KEGG: hma:rrnAC1161 hypothetical protein; hypothetical protein 2844472 4270822 Mlg_2503 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743333.1 2843933 D 187272 CDS YP_743334.1 114321651 4268758 complement(2844469..2845800) 1 NC_008340.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; KEGG: rfr:Rfer_3684 periplasmic sensor signal transduction histidine kinase; periplasmic sensor signal transduction histidine kinase 2845800 4268758 Mlg_2504 Alkalilimnicola ehrlichii MLHE-1 periplasmic sensor signal transduction histidine kinase YP_743334.1 2844469 R 187272 CDS YP_743335.1 114321652 4268759 complement(2845800..2846480) 1 NC_008340.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: xoo:XOO0423 two-component system regulatory protein; two component transcriptional regulator 2846480 4268759 Mlg_2505 Alkalilimnicola ehrlichii MLHE-1 two component transcriptional regulator YP_743335.1 2845800 R 187272 CDS YP_743336.1 114321653 4268760 complement(2846480..2846713) 1 NC_008340.1 KEGG: pol:Bpro_1955 propeptide, PepSY amd peptidase M4; propeptide, PepSY amd peptidase M4 2846713 4268760 Mlg_2506 Alkalilimnicola ehrlichii MLHE-1 propeptide, PepSY amd peptidase M4 YP_743336.1 2846480 R 187272 CDS YP_743337.1 114321654 4268761 complement(2846766..2847281) 1 NC_008340.1 PFAM: 17 kDa surface antigen; KEGG: hch:HCH_06412 predicted outer membrane lipoprotein; 17 kDa surface antigen 2847281 4268761 Mlg_2507 Alkalilimnicola ehrlichii MLHE-1 17 kDa surface antigen YP_743337.1 2846766 R 187272 CDS YP_743338.1 114321655 4268762 2847620..2847988 1 NC_008340.1 KEGG: neu:NE1189 hypothetical protein; hypothetical protein 2847988 4268762 Mlg_2508 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743338.1 2847620 D 187272 CDS YP_743339.1 114321656 4268763 2848018..2849049 1 NC_008340.1 KEGG: pol:Bpro_4057 hypothetical protein; hypothetical protein 2849049 4268763 Mlg_2509 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743339.1 2848018 D 187272 CDS YP_743340.1 114321657 4268764 complement(2849021..2850013) 1 NC_008340.1 PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: noc:Noc_0872 alpha/beta hydrolase fold; alpha/beta hydrolase 2850013 4268764 Mlg_2510 Alkalilimnicola ehrlichii MLHE-1 alpha/beta hydrolase YP_743340.1 2849021 R 187272 CDS YP_743341.1 114321658 4268765 complement(2849998..2851257) 1 NC_008340.1 KEGG: pst:PSPTO1346 sensory box/GGDEF domain protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase 2851257 4268765 Mlg_2511 Alkalilimnicola ehrlichii MLHE-1 PAS/PAC sensor-containing diguanylate cyclase YP_743341.1 2849998 R 187272 CDS YP_743342.1 114321659 4268766 2851466..2853157 1 NC_008340.1 PFAM: NADH dehydrogenase (ubiquinone), 24 kDa subunit; Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: mca:MCA2577 dehydrogenase subunit; NADH dehydrogenase (quinone) 2853157 4268766 Mlg_2512 Alkalilimnicola ehrlichii MLHE-1 NADH dehydrogenase (quinone) YP_743342.1 2851466 D 187272 CDS YP_743343.1 114321660 4268767 2853157..2855940 1 NC_008340.1 TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: ferredoxin; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: reu:Reut_B4651 formate dehydrogenase, alpha subunit; formate dehydrogenase subunit alpha 2855940 4268767 Mlg_2513 Alkalilimnicola ehrlichii MLHE-1 formate dehydrogenase subunit alpha YP_743343.1 2853157 D 187272 CDS YP_743344.1 114321661 4268768 complement(2855986..2857752) 1 NC_008340.1 KEGG: bbr:BB4050 gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase 1 2857752 4268768 Mlg_2514 Alkalilimnicola ehrlichii MLHE-1 gamma-glutamyltransferase 1 YP_743344.1 2855986 R 187272 CDS YP_743345.1 114321662 4268769 complement(2857966..2858904) 1 NC_008340.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mlo:mll3759 similar to ABC transporter (binding protein); glyoxalase/bleomycin resistance protein/dioxygenase 2858904 4268769 Mlg_2515 Alkalilimnicola ehrlichii MLHE-1 glyoxalase/bleomycin resistance protein/dioxygenase YP_743345.1 2857966 R 187272 CDS YP_743346.1 114321663 4268771 complement(2859217..2861013) 1 NC_008340.1 TIGRFAM: RNA polymerase sigma factor RpoD; PFAM: sigma-70 1.1 domain protein; sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70, non-essential domain protein; sigma-70 region 1.2; KEGG: ppu:PP0387 RNA polymerase sigma factor RpoD; RNA polymerase sigma-70 subunit RpoD 2861013 4268771 Mlg_2516 Alkalilimnicola ehrlichii MLHE-1 RNA polymerase sigma-70 subunit RpoD YP_743346.1 2859217 R 187272 CDS YP_743347.1 114321664 4268772 complement(2861112..2862965) 1 NC_008340.1 KEGG: ppr:PBPRA0431 DNA primase; TIGRFAM: DNA primase; PFAM: zinc finger, CHC2-family protein; TOPRIM domain protein; DNA primase DnaG, DnaB-binding; DNA primase catalytic core, N-terminal domain; SMART: Toprim sub domain protein; DNA primase 2862965 4268772 Mlg_2517 Alkalilimnicola ehrlichii MLHE-1 DNA primase YP_743347.1 2861112 R 187272 CDS YP_743348.1 114321665 4268773 complement(2863012..2863470) 1 NC_008340.1 PFAM: GatB/Yqey domain protein; KEGG: sde:Sde_0718 hypothetical protein; GatB/Yqey domain-containing protein 2863470 4268773 Mlg_2518 Alkalilimnicola ehrlichii MLHE-1 GatB/Yqey domain-containing protein YP_743348.1 2863012 R 187272 CDS YP_743349.1 114321666 4268774 complement(2863497..2863712) 1 NC_008340.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 2863712 rpsU 4268774 rpsU Alkalilimnicola ehrlichii MLHE-1 30S ribosomal protein S21 YP_743349.1 2863497 R 187272 CDS YP_743350.1 114321667 4270159 2863838..2864857 1 NC_008340.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease 2864857 4270159 Mlg_2520 Alkalilimnicola ehrlichii MLHE-1 DNA-binding/iron metalloprotein/AP endonuclease YP_743350.1 2863838 D 187272 CDS YP_743351.1 114321668 4270160 complement(2864882..2865493) 1 NC_008340.1 PFAM: protein of unknown function DUF205; KEGG: lpn:lpg2356 transmembrane protein; acyl-phosphate glycerol-3-phosphate acyltransferase 2865493 4270160 Mlg_2521 Alkalilimnicola ehrlichii MLHE-1 acyl-phosphate glycerol-3-phosphate acyltransferase YP_743351.1 2864882 R 187272 CDS YP_743352.1 114321669 4270161 2865864..2866220 1 NC_008340.1 TIGRFAM: dihydroneopterin aldolase; KEGG: pae:PA0582 dihydroneopterin aldolase; dihydroneopterin aldolase 2866220 4270161 Mlg_2522 Alkalilimnicola ehrlichii MLHE-1 dihydroneopterin aldolase YP_743352.1 2865864 D 187272 CDS YP_743353.1 114321670 4270162 2866217..2866705 1 NC_008340.1 TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; KEGG: noc:Noc_0038 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, HppK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 2866705 4270162 Mlg_2523 Alkalilimnicola ehrlichii MLHE-1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_743353.1 2866217 D 187272 CDS YP_743354.1 114321671 4270163 2866702..2867913 1 NC_008340.1 PFAM: protein of unknown function DUF185; KEGG: dar:Daro_4140 protein of unknown function DUF185; hypothetical protein 2867913 4270163 Mlg_2524 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743354.1 2866702 D 187272 CDS YP_743355.1 114321672 4270164 2868200..2868490 1 NC_008340.1 KEGG: mca:MCA2737 hypothetical protein; hypothetical protein 2868490 4270164 Mlg_2525 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743355.1 2868200 D 187272 CDS YP_743356.1 114321673 4270165 2868500..2869183 1 NC_008340.1 PFAM: Endonuclease V; KEGG: mca:MCA0045 endonuclease V; endonuclease V 2869183 4270165 Mlg_2526 Alkalilimnicola ehrlichii MLHE-1 endonuclease V YP_743356.1 2868500 D 187272 CDS YP_743357.1 114321674 4270166 2869180..2869563 1 NC_008340.1 KEGG: eba:ebB186 hypothetical protein; hypothetical protein 2869563 4270166 Mlg_2527 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743357.1 2869180 D 187272 CDS YP_743358.1 114321675 4270167 2869568..2871319 1 NC_008340.1 PFAM: TrkA-N domain protein; KEGG: mfa:Mfla_2071 TrkA-N; TrkA domain-containing protein 2871319 4270167 Mlg_2528 Alkalilimnicola ehrlichii MLHE-1 TrkA domain-containing protein YP_743358.1 2869568 D 187272 CDS YP_743359.1 114321676 4270168 complement(2871356..2872006) 1 NC_008340.1 PFAM: OmpA/MotB domain protein; KEGG: mfa:Mfla_1578 OmpA/MotB; OmpA/MotB domain-containing protein 2872006 4270168 Mlg_2529 Alkalilimnicola ehrlichii MLHE-1 OmpA/MotB domain-containing protein YP_743359.1 2871356 R 187272 CDS YP_743360.1 114321677 4270169 complement(2872126..2873154) 1 NC_008340.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: mfa:Mfla_0031 oxidoreductase FAD/NAD(P)-binding; oxidoreductase FAD/NAD(P)-binding subunit 2873154 4270169 Mlg_2530 Alkalilimnicola ehrlichii MLHE-1 oxidoreductase FAD/NAD(P)-binding subunit YP_743360.1 2872126 R 187272 CDS YP_743361.1 114321678 4270170 complement(2873183..2874649) 1 NC_008340.1 TIGRFAM: UbiD family decarboxylases; PFAM: Carboxylyase-related protein; KEGG: pfl:PFL_5980 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; UbiD family decarboxylase 2874649 4270170 Mlg_2531 Alkalilimnicola ehrlichii MLHE-1 UbiD family decarboxylase YP_743361.1 2873183 R 187272 CDS YP_743362.1 114321679 4270171 2874833..2875306 1 NC_008340.1 KEGG: ssn:SSO_0271 hypothetical protein; hypothetical protein 2875306 4270171 Mlg_2532 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743362.1 2874833 D 187272 CDS YP_743363.1 114321680 4270172 complement(2875802..2877841) 1 NC_008340.1 PFAM: peptidase M3A and M3B, thimet/oligopeptidase F; KEGG: noc:Noc_0208 oligopeptidase A; oligopeptidase A 2877841 4270172 Mlg_2533 Alkalilimnicola ehrlichii MLHE-1 oligopeptidase A YP_743363.1 2875802 R 187272 CDS YP_743364.1 114321681 4270173 complement(2878188..2879543) 1 NC_008340.1 TIGRFAM: glutathione-disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD dependent oxidoreductase; KEGG: yps:YPTB3818 glutathione reductase; NADPH-glutathione reductase 2879543 4270173 Mlg_2534 Alkalilimnicola ehrlichii MLHE-1 NADPH-glutathione reductase YP_743364.1 2878188 R 187272 CDS YP_743365.1 114321682 4270174 complement(2879625..2880449) 1 NC_008340.1 KEGG: pol:Bpro_1826 hypothetical protein; hypothetical protein 2880449 4270174 Mlg_2535 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743365.1 2879625 R 187272 CDS YP_743366.1 114321683 4270175 2880674..2880883 1 NC_008340.1 PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: pae:PA1159 probable cold-shock protein; cold-shock DNA-binding protein family protein 2880883 4270175 Mlg_2536 Alkalilimnicola ehrlichii MLHE-1 cold-shock DNA-binding protein family protein YP_743366.1 2880674 D 187272 CDS YP_743367.1 114321684 4270925 complement(2880955..2881431) 1 NC_008340.1 PFAM: protein of unknown function DUF55; KEGG: mca:MCA0353 hypothetical protein; hypothetical protein 2881431 4270925 Mlg_2537 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743367.1 2880955 R 187272 CDS YP_743368.1 114321685 4270926 complement(2881729..2882358) 1 NC_008340.1 PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: pfl:PFL_5971 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase 2882358 4270926 Mlg_2538 Alkalilimnicola ehrlichii MLHE-1 5-formyltetrahydrofolate cyclo-ligase YP_743368.1 2881729 R 187272 CDS YP_743369.1 114321686 4270927 complement(2882667..2882951) 1 NC_008340.1 PFAM: protein of unknown function DUF710; KEGG: nmu:Nmul_A0626 protein of unknown function DUF710; cell division protein ZapA 2882951 4270927 Mlg_2539 Alkalilimnicola ehrlichii MLHE-1 cell division protein ZapA YP_743369.1 2882667 R 187272 CDS YP_743370.1 114321687 4270928 complement(2882977..2883192) 1 NC_008340.1 TIGRFAM: conserved hypothetical protein; KEGG: xcb:XC_0903 hypothetical protein; hypothetical protein 2883192 4270928 Mlg_2540 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743370.1 2882977 R 187272 CDS YP_743371.1 114321688 4270929 2883340..2883915 1 NC_008340.1 TIGRFAM: yecA family protein; PFAM: protein of unknown function UPF0149; KEGG: sdn:Sden_0830 YgfB and YecA; hypothetical protein 2883915 4270929 Mlg_2541 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743371.1 2883340 D 187272 CDS YP_743372.1 114321689 4270930 2883927..2885240 1 NC_008340.1 PFAM: peptidase M24; peptidase M24B, X-Pro dipeptidase/aminopeptidase domain protein; KEGG: noc:Noc_2579 peptidase M24; aminopeptidase 2885240 4270930 Mlg_2542 Alkalilimnicola ehrlichii MLHE-1 aminopeptidase YP_743372.1 2883927 D 187272 CDS YP_743373.1 114321690 4270931 2885237..2886478 1 NC_008340.1 TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; 2-polyprenyl-6-methoxyphenol 4-hydroxylase; PFAM: monooxygenase, FAD-binding; KEGG: noc:Noc_2580 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6; 2-octaprenyl-6-methoxyphenol hydroxylase/2-octaprenyl-3-methyl-6-methoxy-1, 4-benzoquinol hydroxylase 2886478 4270931 Mlg_2543 Alkalilimnicola ehrlichii MLHE-1 2-octaprenyl-6-methoxyphenol hydroxylase/2-octaprenyl-3-methyl-6-methoxy-1, 4-benzoquinol hydroxylase YP_743373.1 2885237 D 187272 CDS YP_743374.1 114321691 4270932 2886475..2887698 1 NC_008340.1 TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase, FAD-binding; KEGG: noc:Noc_2581 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6; UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase 2887698 4270932 Mlg_2544 Alkalilimnicola ehrlichii MLHE-1 UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase YP_743374.1 2886475 D 187272 CDS YP_743375.1 114321692 4270933 complement(2887649..2889319) 1 NC_008340.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: noc:Noc_0722 signal transduction histidine kinase; periplasmic sensor signal transduction histidine kinase 2889319 4270933 Mlg_2545 Alkalilimnicola ehrlichii MLHE-1 periplasmic sensor signal transduction histidine kinase YP_743375.1 2887649 R 187272 CDS YP_743376.1 114321693 4270934 complement(2889326..2889592) 1 NC_008340.1 KEGG: rme:Rmet_3092 hypothetical protein; hypothetical protein 2889592 4270934 Mlg_2546 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743376.1 2889326 R 187272 CDS YP_743377.1 114321694 4270935 2889741..2890916 1 NC_008340.1 catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 2890916 sucC 4270935 sucC Alkalilimnicola ehrlichii MLHE-1 succinyl-CoA synthetase subunit beta YP_743377.1 2889741 D 187272 CDS YP_743378.1 114321695 4270936 2890946..2891818 1 NC_008340.1 TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: csa:Csal_1221 succinyl-CoA synthetase, alpha subunit; succinyl-CoA synthetase alpha subunit 2891818 4270936 Mlg_2548 Alkalilimnicola ehrlichii MLHE-1 succinyl-CoA synthetase alpha subunit YP_743378.1 2890946 D 187272 CDS YP_743379.1 114321696 4270937 2891927..2893552 1 NC_008340.1 KEGG: mca:MCA0969 NAD(+) synthetase; TIGRFAM: NAD+ synthetase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; NAD+ synthase; ExsB family protein; NAD+ synthetase 2893552 4270937 Mlg_2549 Alkalilimnicola ehrlichii MLHE-1 NAD+ synthetase YP_743379.1 2891927 D 187272 CDS YP_743380.1 114321697 4270938 2893679..2894017 1 NC_008340.1 PFAM: nitrogen regulatory protein P-II; KEGG: pmu:PM2004 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II 2894017 4270938 Mlg_2550 Alkalilimnicola ehrlichii MLHE-1 nitrogen regulatory protein P-II YP_743380.1 2893679 D 187272 CDS YP_743381.1 114321698 4270939 complement(2894078..2894842) 1 NC_008340.1 KEGG: son:SO3580 lipoprotein; lipoprotein 2894842 4270939 Mlg_2551 Alkalilimnicola ehrlichii MLHE-1 lipoprotein YP_743381.1 2894078 R 187272 CDS YP_743382.1 114321699 4270940 2894913..2895854 1 NC_008340.1 KEGG: csa:Csal_0497 pseudouridine synthase, RluD; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; ribosomal large subunit pseudouridine synthase D 2895854 4270940 Mlg_2552 Alkalilimnicola ehrlichii MLHE-1 ribosomal large subunit pseudouridine synthase D YP_743382.1 2894913 D 187272 CDS YP_743383.1 114321700 4270941 2895909..2897009 1 NC_008340.1 PFAM: ATP dependent DNA ligase; KEGG: noc:Noc_1413 ATP-dependent DNA ligase; ATP dependent DNA ligase 2897009 4270941 Mlg_2553 Alkalilimnicola ehrlichii MLHE-1 ATP dependent DNA ligase YP_743383.1 2895909 D 187272 CDS YP_743384.1 114321701 4270942 complement(2897032..2898348) 1 NC_008340.1 PFAM: aminotransferase, class I and II; KEGG: csa:Csal_1034 aminotransferase, class I and II; aminotransferase 2898348 4270942 Mlg_2554 Alkalilimnicola ehrlichii MLHE-1 aminotransferase YP_743384.1 2897032 R 187272 CDS YP_743385.1 114321702 4269658 2898596..2899378 1 NC_008340.1 TIGRFAM: HAD-superfamily subfamily IIA hydrolase like protein; HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: dar:Daro_4161 HAD-superfamily subfamily IIA hydrolase, hypothetical 2:HAD-superfamily hydrolase, subfamily IIA; HAD family hydrolase 2899378 4269658 Mlg_2555 Alkalilimnicola ehrlichii MLHE-1 HAD family hydrolase YP_743385.1 2898596 D 187272 CDS YP_743386.1 114321703 4269659 complement(2899375..2899953) 1 NC_008340.1 KEGG: noc:Noc_1414 hypothetical protein; hypothetical protein 2899953 4269659 Mlg_2556 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743386.1 2899375 R 187272 CDS YP_743387.1 114321704 4269660 complement(2900036..2900851) 1 NC_008340.1 PFAM: protein of unknown function DUF152; KEGG: cvi:CV2191 conserved hypothetical protein; hypothetical protein 2900851 4269660 Mlg_2557 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743387.1 2900036 R 187272 CDS YP_743388.1 114321705 4269661 2900908..2903502 1 NC_008340.1 PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: noc:Noc_2381 ATP-dependent Clp protease; ATPase 2903502 4269661 Mlg_2558 Alkalilimnicola ehrlichii MLHE-1 ATPase YP_743388.1 2900908 D 187272 CDS YP_743389.1 114321706 4269662 2903650..2903898 1 NC_008340.1 KEGG: xcb:XC_3180 type I site-specific restriction-modification system, R (restriction) subunit and related helicases; hypothetical protein 2903898 4269662 Mlg_2559 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743389.1 2903650 D 187272 CDS YP_743390.1 114321707 4269663 2903975..2904256 1 NC_008340.1 hypothetical protein 2904256 4269663 Mlg_2560 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743390.1 2903975 D 187272 CDS YP_743391.1 114321708 4269664 2904258..2904518 1 NC_008340.1 PFAM: helix-turn-helix domain protein; KEGG: noc:Noc_0167 transcriptional regulator, XRE family; XRE family transcriptional regulator 2904518 4269664 Mlg_2561 Alkalilimnicola ehrlichii MLHE-1 XRE family transcriptional regulator YP_743391.1 2904258 D 187272 CDS YP_743392.1 114321709 4269665 2904627..2904884 1 NC_008340.1 TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: vvu:VV12432 antitoxin of toxin-antitoxin stability system; prevent-host-death family protein 2904884 4269665 Mlg_2562 Alkalilimnicola ehrlichii MLHE-1 prevent-host-death family protein YP_743392.1 2904627 D 187272 CDS YP_743393.1 114321710 4269666 2904872..2905183 1 NC_008340.1 PFAM: plasmid stabilization system; KEGG: vvu:VV12433 plasmid stabilization system protein; plasmid stabilization system protein 2905183 4269666 Mlg_2563 Alkalilimnicola ehrlichii MLHE-1 plasmid stabilization system protein YP_743393.1 2904872 D 187272 CDS YP_743394.1 114321711 4269667 complement(2905210..2906115) 1 NC_008340.1 PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: atc:AGR_C_4804 glycerol-3-phosphate dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein 2906115 4269667 Mlg_2564 Alkalilimnicola ehrlichii MLHE-1 NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein YP_743394.1 2905210 R 187272 CDS YP_743395.1 114321712 4269668 complement(2906649..2907536) 1 NC_008340.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase; NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; Shikimate/quinate 5-dehydrogenase; KEGG: mca:MCA2048 oxidoreductase, Gfo/Idh/MocA family; 6-phosphogluconate dehydrogenase 2907536 4269668 Mlg_2565 Alkalilimnicola ehrlichii MLHE-1 6-phosphogluconate dehydrogenase YP_743395.1 2906649 R 187272 CDS YP_743396.1 114321713 4269669 complement(2907577..2908155) 1 NC_008340.1 TIGRFAM: DJ-1 family protein; PFAM: ThiJ/PfpI domain protein; KEGG: tbd:Tbd_1845 protease; DJ-1 family protein 2908155 4269669 Mlg_2566 Alkalilimnicola ehrlichii MLHE-1 DJ-1 family protein YP_743396.1 2907577 R 187272 CDS YP_743397.1 114321714 4269670 complement(2908152..2908946) 1 NC_008340.1 PFAM: protein of unknown function DUF610, YibQ; KEGG: pha:PSHAa0363 hypothetical protein; hypothetical protein 2908946 4269670 Mlg_2567 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743397.1 2908152 R 187272 CDS YP_743398.1 114321715 4269671 complement(2908951..2910231) 1 NC_008340.1 KEGG: noc:Noc_0030 peptidase S41A; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; C-terminal processing peptidase-3 2910231 4269671 Mlg_2568 Alkalilimnicola ehrlichii MLHE-1 C-terminal processing peptidase-3 YP_743398.1 2908951 R 187272 CDS YP_743399.1 114321716 4269672 complement(2910346..2911563) 1 NC_008340.1 PFAM: peptidase M23B; KEGG: ilo:IL0232 membrane-associated metallopeptidase, NlpD family; peptidase M23B 2911563 4269672 Mlg_2569 Alkalilimnicola ehrlichii MLHE-1 peptidase M23B YP_743399.1 2910346 R 187272 CDS YP_743400.1 114321717 4269673 2911653..2912108 1 NC_008340.1 PFAM: Rhodanese domain protein; KEGG: ppr:PBPRA0225 hypothetical protein; rhodanese domain-containing protein 2912108 4269673 Mlg_2570 Alkalilimnicola ehrlichii MLHE-1 rhodanese domain-containing protein YP_743400.1 2911653 D 187272 CDS YP_743401.1 114321718 4269674 2912192..2912758 1 NC_008340.1 molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB 2912758 4269674 Mlg_2571 Alkalilimnicola ehrlichii MLHE-1 preprotein translocase subunit SecB YP_743401.1 2912192 D 187272 CDS YP_743402.1 114321719 4270281 2912780..2913778 1 NC_008340.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 2913778 gpsA 4270281 gpsA Alkalilimnicola ehrlichii MLHE-1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_743402.1 2912780 D 187272 CDS YP_743403.1 114321720 4270282 2913786..2914247 1 NC_008340.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: noc:Noc_2823 RNA methyltransferase TrmH, group 2; tRNA/rRNA methyltransferase SpoU 2914247 4270282 Mlg_2573 Alkalilimnicola ehrlichii MLHE-1 tRNA/rRNA methyltransferase SpoU YP_743403.1 2913786 D 187272 CDS YP_743404.1 114321721 4270283 2914337..2915356 1 NC_008340.1 PFAM: extracellular solute-binding protein, family 1; KEGG: tbd:Tbd_0990 ABC transporter, iron binding protein; extracellular solute-binding protein 2915356 4270283 Mlg_2574 Alkalilimnicola ehrlichii MLHE-1 extracellular solute-binding protein YP_743404.1 2914337 D 187272 CDS YP_743405.1 114321722 4270284 2915361..2917067 1 NC_008340.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pae:PA5216 iron transport system permease; binding-protein-dependent transport systems inner membrane component 2917067 4270284 Mlg_2575 Alkalilimnicola ehrlichii MLHE-1 binding-protein-dependent transport systems inner membrane component YP_743405.1 2915361 D 187272 CDS YP_743406.1 114321723 4270285 2917152..2918246 1 NC_008340.1 catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T 2918246 gcvT 4270285 gcvT Alkalilimnicola ehrlichii MLHE-1 glycine cleavage system aminomethyltransferase T YP_743406.1 2917152 D 187272 CDS YP_743407.1 114321724 4270286 2918325..2918717 1 NC_008340.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H 2918717 4270286 Mlg_2577 Alkalilimnicola ehrlichii MLHE-1 glycine cleavage system protein H YP_743407.1 2918325 D 187272 CDS YP_743408.1 114321725 4270287 2918723..2920105 1 NC_008340.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 2 to form the P protein; glycine dehydrogenase subunit 1 2920105 4270287 Mlg_2578 Alkalilimnicola ehrlichii MLHE-1 glycine dehydrogenase subunit 1 YP_743408.1 2918723 D 187272 CDS YP_743409.1 114321726 4270288 2920122..2920622 1 NC_008340.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: ade:Adeh_0828 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; thiol peroxidase 2920622 4270288 Mlg_2579 Alkalilimnicola ehrlichii MLHE-1 thiol peroxidase YP_743409.1 2920122 D 187272 CDS YP_743410.1 114321727 4270289 2920633..2922168 1 NC_008340.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein; glycine dehydrogenase subunit 2 2922168 4270289 Mlg_2580 Alkalilimnicola ehrlichii MLHE-1 glycine dehydrogenase subunit 2 YP_743410.1 2920633 D 187272 CDS YP_743411.1 114321728 4270290 complement(2922481..2923368) 1 NC_008340.1 KEGG: dps:DP0063 hypothetical protein; hypothetical protein 2923368 4270290 Mlg_2581 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743411.1 2922481 R 187272 CDS YP_743412.1 114321729 4270291 2923506..2924585 1 NC_008340.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: nmu:Nmul_A0104 Sel1-like repeat; Sel1 domain-containing protein 2924585 4270291 Mlg_2582 Alkalilimnicola ehrlichii MLHE-1 Sel1 domain-containing protein YP_743412.1 2923506 D 187272 CDS YP_743413.1 114321730 4270292 2924640..2926031 1 NC_008340.1 KEGG: pca:Pcar_2788 hypothetical protein; hypothetical protein 2926031 4270292 Mlg_2583 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743413.1 2924640 D 187272 CDS YP_743414.1 114321731 4270293 2926110..2929604 1 NC_008340.1 KEGG: noc:Noc_1583 hypothetical protein; hypothetical protein 2929604 4270293 Mlg_2584 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743414.1 2926110 D 187272 CDS YP_743415.1 114321732 4270294 2929920..2930117 1 NC_008340.1 KEGG: nar:Saro_0851 hypothetical protein; hypothetical protein 2930117 4270294 Mlg_2585 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743415.1 2929920 D 187272 CDS YP_743416.1 114321733 4270295 complement(2930211..2930654) 1 NC_008340.1 catalyzes the reaction of cyanate and bicarbonate to produce ammonia and carbon dioxide; cyanate hydratase 2930654 4270295 Mlg_2586 Alkalilimnicola ehrlichii MLHE-1 cyanate hydratase YP_743416.1 2930211 R 187272 CDS YP_743417.1 114321734 4270296 complement(2930741..2931613) 1 NC_008340.1 KEGG: mfa:Mfla_2170 nitrate transport ATP-binding subunits C and D; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter related; SMART: AAA ATPase; nitrate ABC transporter ATPases C and D 2931613 4270296 Mlg_2587 Alkalilimnicola ehrlichii MLHE-1 nitrate ABC transporter ATPases C and D YP_743417.1 2930741 R 187272 CDS YP_743418.1 114321735 4270297 complement(2931710..2932549) 1 NC_008340.1 TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rfr:Rfer_3741 nitrate transport permease; nitrate ABC transporter, inner membrane subunit 2932549 4270297 Mlg_2588 Alkalilimnicola ehrlichii MLHE-1 nitrate ABC transporter, inner membrane subunit YP_743418.1 2931710 R 187272 CDS YP_743419.1 114321736 4270298 complement(2932553..2933980) 1 NC_008340.1 TIGRFAM: Twin-arginine translocation pathway signal; KEGG: rpa:RPA2112 nitrate transporter component, nrtA; nitrate transporter component 2933980 4270298 Mlg_2589 Alkalilimnicola ehrlichii MLHE-1 nitrate transporter component YP_743419.1 2932553 R 187272 CDS YP_743420.1 114321737 4269223 complement(2934251..2934832) 1 NC_008340.1 PFAM: ANTAR domain protein; KEGG: csa:Csal_1132 response regulator receiver (CheY-like) and ANTAR domain protein; response regulator receiver/ANTAR domain-containing protein 2934832 4269223 Mlg_2590 Alkalilimnicola ehrlichii MLHE-1 response regulator receiver/ANTAR domain-containing protein YP_743420.1 2934251 R 187272 CDS YP_743421.1 114321738 4269224 2935100..2936749 1 NC_008340.1 PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 2936749 4269224 Mlg_2591 Alkalilimnicola ehrlichii MLHE-1 phosphoenolpyruvate carboxykinase YP_743421.1 2935100 D 187272 CDS YP_743422.1 114321739 4269225 2936829..2937437 1 NC_008340.1 hypothetical protein 2937437 4269225 Mlg_2592 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743422.1 2936829 D 187272 CDS YP_743423.1 114321740 4269226 complement(2937474..2938517) 1 NC_008340.1 PFAM: cobalamin synthesis protein, P47K; KEGG: ypm:YP1312 cobalamin synthesis protein; cobalamin synthesis protein, P47K 2938517 4269226 Mlg_2593 Alkalilimnicola ehrlichii MLHE-1 cobalamin synthesis protein, P47K YP_743423.1 2937474 R 187272 CDS YP_743424.1 114321741 4269227 complement(2938869..2939114) 1 NC_008340.1 PFAM: phosphopantetheine-binding; KEGG: bte:BTH_II0931 hypothetical protein; phosphopantetheine-binding 2939114 4269227 Mlg_2594 Alkalilimnicola ehrlichii MLHE-1 phosphopantetheine-binding YP_743424.1 2938869 R 187272 CDS YP_743425.1 114321742 4269228 complement(2939111..2940436) 1 NC_008340.1 PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: rfr:Rfer_0385 catalytic domain of components of various dehydrogenase complexes; dehydrogenase catalytic domain-containing protein 2940436 4269228 Mlg_2595 Alkalilimnicola ehrlichii MLHE-1 dehydrogenase catalytic domain-containing protein YP_743425.1 2939111 R 187272 CDS YP_743426.1 114321743 4269229 complement(2940433..2942442) 1 NC_008340.1 PFAM: dehydrogenase, E1 component; Transketolase, central region; Transketolase domain protein; KEGG: jan:Jann_3081 dehydrogenase, E1 component; dehydrogenase, E1 component 2942442 4269229 Mlg_2596 Alkalilimnicola ehrlichii MLHE-1 dehydrogenase, E1 component YP_743426.1 2940433 R 187272 CDS YP_743427.1 114321744 4269230 complement(2942432..2944198) 1 NC_008340.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase 2944198 4269230 Mlg_2597 Alkalilimnicola ehrlichii MLHE-1 acetyl-CoA synthetase YP_743427.1 2942432 R 187272 CDS YP_743428.1 114321745 4269231 2944417..2945013 1 NC_008340.1 PFAM: Abortive infection protein; KEGG: noc:Noc_1193 abortive infection protein; abortive infection protein 2945013 4269231 Mlg_2598 Alkalilimnicola ehrlichii MLHE-1 abortive infection protein YP_743428.1 2944417 D 187272 CDS YP_743429.1 114321746 4269232 complement(2945050..2945727) 1 NC_008340.1 PFAM: nitroreductase; KEGG: pab:PAB0163 NADH oxidase; nitroreductase 2945727 4269232 Mlg_2599 Alkalilimnicola ehrlichii MLHE-1 nitroreductase YP_743429.1 2945050 R 187272 CDS YP_743430.1 114321747 4269233 2945940..2946305 1 NC_008340.1 KEGG: csa:Csal_2464 hypothetical protein; hypothetical protein 2946305 4269233 Mlg_2600 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743430.1 2945940 D 187272 CDS YP_743431.1 114321748 4269234 complement(2946388..2947842) 1 NC_008340.1 functions in propionate metabolism; involved in isomerization of (2S,3S)-methylcitrate to (2R,3S)-methylisocitrate; also encodes minor aconitase or dehydratase activity; aconitase C; 2-methylcitrate dehydratase 2947842 prpD 4269234 prpD Alkalilimnicola ehrlichii MLHE-1 2-methylcitrate dehydratase YP_743431.1 2946388 R 187272 CDS YP_743432.1 114321749 4269235 complement(2948461..2949639) 1 NC_008340.1 TIGRFAM: AcnD-accessory protein PrpF; PFAM: protein of unknown function DUF453; KEGG: rme:Rmet_1584 PrpF, AcnD-accessory; methylitaconate delta2-delta3-isomerase 2949639 4269235 Mlg_2602 Alkalilimnicola ehrlichii MLHE-1 methylitaconate delta2-delta3-isomerase YP_743432.1 2948461 R 187272 CDS YP_743433.1 114321750 4269236 complement(2949762..2952380) 1 NC_008340.1 Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 2952380 4269236 Mlg_2603 Alkalilimnicola ehrlichii MLHE-1 aconitate hydratase YP_743433.1 2949762 R 187272 CDS YP_743434.1 114321751 4269237 complement(2952736..2953860) 1 NC_008340.1 KEGG: csa:Csal_2420 2-methylcitrate synthase/citrate synthase II; TIGRFAM: 2-methylcitrate synthase/citrate synthase II; PFAM: Citrate synthase; 2-methylcitrate synthase 2953860 4269237 Mlg_2604 Alkalilimnicola ehrlichii MLHE-1 2-methylcitrate synthase YP_743434.1 2952736 R 187272 CDS YP_743435.1 114321752 4269238 complement(2954067..2954948) 1 NC_008340.1 catalyzes the formation of pyruvate and succinate from 2-methylisocitrate; 2-methylisocitrate lyase 2954948 prpB 4269238 prpB Alkalilimnicola ehrlichii MLHE-1 2-methylisocitrate lyase YP_743435.1 2954067 R 187272 CDS YP_743436.1 114321753 4269239 complement(2955011..2955997) 1 NC_008340.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: noc:Noc_2046 zinc-containing alcohol dehydrogenase superfamily; alcohol dehydrogenase 2955997 4269239 Mlg_2606 Alkalilimnicola ehrlichii MLHE-1 alcohol dehydrogenase YP_743436.1 2955011 R 187272 CDS YP_743437.1 114321754 4269516 complement(2956295..2957719) 1 NC_008340.1 TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD dependent oxidoreductase; KEGG: hch:HCH_04743 dihydrolipoamide dehydrogenase; dihydrolipoamide dehydrogenase 2957719 4269516 Mlg_2607 Alkalilimnicola ehrlichii MLHE-1 dihydrolipoamide dehydrogenase YP_743437.1 2956295 R 187272 CDS YP_743438.1 114321755 4269517 complement(2957764..2959032) 1 NC_008340.1 TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: pae:PA1586 dihydrolipoamide succinyltransferase (E2 subunit); 2-oxoglutarate dehydrogenase E2 2959032 4269517 Mlg_2608 Alkalilimnicola ehrlichii MLHE-1 2-oxoglutarate dehydrogenase E2 YP_743438.1 2957764 R 187272 CDS YP_743439.1 114321756 4269518 complement(2959122..2961947) 1 NC_008340.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 2961947 sucA 4269518 sucA Alkalilimnicola ehrlichii MLHE-1 2-oxoglutarate dehydrogenase E1 YP_743439.1 2959122 R 187272 CDS YP_743440.1 114321757 4269519 complement(2962555..2963343) 1 NC_008340.1 TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: csa:Csal_0591 sec-independent protein translocase TatC; Sec-independent protein translocase TatC 2963343 4269519 Mlg_2610 Alkalilimnicola ehrlichii MLHE-1 Sec-independent protein translocase TatC YP_743440.1 2962555 R 187272 CDS YP_743441.1 114321758 4269520 complement(2963340..2963879) 1 NC_008340.1 TIGRFAM: twin-arginine translocation protein, TatB subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: vfi:VF0050 sec-independent protein translocase TatB; twin-arginine translocation protein, TatB subunit 2963879 4269520 Mlg_2611 Alkalilimnicola ehrlichii MLHE-1 twin-arginine translocation protein, TatB subunit YP_743441.1 2963340 R 187272 CDS YP_743442.1 114321759 4269521 complement(2963909..2964181) 1 NC_008340.1 TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: hch:HCH_01076 sec-independent protein secretion pathway components; twin arginine-targeting protein translocase 2964181 4269521 Mlg_2612 Alkalilimnicola ehrlichii MLHE-1 twin arginine-targeting protein translocase YP_743442.1 2963909 R 187272 CDS YP_743443.1 114321760 4269522 complement(2964215..2964544) 1 NC_008340.1 catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis; phosphoribosyl-ATP pyrophosphatase 2964544 hisE 4269522 hisE Alkalilimnicola ehrlichii MLHE-1 phosphoribosyl-ATP pyrophosphatase YP_743443.1 2964215 R 187272 CDS YP_743444.1 114321761 4269523 complement(2964541..2965338) 1 NC_008340.1 TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis; KEGG: noc:Noc_3054 imidazole glycerol phosphate synthase subunit HisF; imidazole glycerol phosphate synthase subunit HisF 2965338 4269523 Mlg_2614 Alkalilimnicola ehrlichii MLHE-1 imidazole glycerol phosphate synthase subunit HisF YP_743444.1 2964541 R 187272 CDS YP_743445.1 114321762 4269524 complement(2965335..2966093) 1 NC_008340.1 TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: histidine biosynthesis; KEGG: sde:Sde_0489 response regulator receiver domain protein (CheY-like); 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 2966093 4269524 Mlg_2615 Alkalilimnicola ehrlichii MLHE-1 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase YP_743445.1 2965335 R 187272 CDS YP_743446.1 114321763 4269525 complement(2966098..2966742) 1 NC_008340.1 TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I; KEGG: ppu:PP0290 glutamine amidotransferase HisH; imidazole glycerol phosphate synthase subunit HisH 2966742 4269525 Mlg_2616 Alkalilimnicola ehrlichii MLHE-1 imidazole glycerol phosphate synthase subunit HisH YP_743446.1 2966098 R 187272 CDS YP_743447.1 114321764 4269526 complement(2966742..2967335) 1 NC_008340.1 PFAM: imidazoleglycerol-phosphate dehydratase; KEGG: pfo:Pfl_0323 imidazoleglycerol-phosphate dehydratase; imidazoleglycerol-phosphate dehydratase 2967335 4269526 Mlg_2617 Alkalilimnicola ehrlichii MLHE-1 imidazoleglycerol-phosphate dehydratase YP_743447.1 2966742 R 187272 CDS YP_743448.1 114321765 4269527 complement(2967462..2967914) 1 NC_008340.1 PFAM: D-tyrosyl-tRNA(Tyr) deacylase; KEGG: mca:MCA1743 D-tyrosyl-tRNA deacylase; D-tyrosyl-tRNA(Tyr) deacylase 2967914 4269527 Mlg_2618 Alkalilimnicola ehrlichii MLHE-1 D-tyrosyl-tRNA(Tyr) deacylase YP_743448.1 2967462 R 187272 CDS YP_743449.1 114321766 4269528 complement(2968047..2968604) 1 NC_008340.1 hypothetical protein 2968604 4269528 Mlg_2619 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743449.1 2968047 R 187272 CDS YP_743450.1 114321767 4269529 2968740..2969666 1 NC_008340.1 PFAM: lipid A biosynthesis acyltransferase; KEGG: tcx:Tcr_0183 lipid A biosynthesis acyltransferase; lipid A biosynthesis acyltransferase 2969666 4269529 Mlg_2620 Alkalilimnicola ehrlichii MLHE-1 lipid A biosynthesis acyltransferase YP_743450.1 2968740 D 187272 CDS YP_743451.1 114321768 4269530 complement(2969683..2970006) 1 NC_008340.1 PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: tbd:Tbd_0023 hypothetical protein with TPR repeat; TPR repeat-containing protein 2970006 4269530 Mlg_2621 Alkalilimnicola ehrlichii MLHE-1 TPR repeat-containing protein YP_743451.1 2969683 R 187272 CDS YP_743452.1 114321769 4269531 complement(2970041..2971417) 1 NC_008340.1 involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; potassium transporter peripheral membrane component 2971417 trkA 4269531 trkA Alkalilimnicola ehrlichii MLHE-1 potassium transporter peripheral membrane component YP_743452.1 2970041 R 187272 CDS YP_743453.1 114321770 4269532 complement(2971431..2972801) 1 NC_008340.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; KEGG: mca:MCA2848 nitrogen regulation protein NtrX; Fis family transcriptional regulator 2972801 4269532 Mlg_2623 Alkalilimnicola ehrlichii MLHE-1 Fis family transcriptional regulator YP_743453.1 2971431 R 187272 CDS YP_743454.1 114321771 4269533 complement(2972808..2974997) 1 NC_008340.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; KEGG: noc:Noc_3018 signal transduction histidine kinase, NtrY; multi-sensor signal transduction histidine kinase 2974997 4269533 Mlg_2624 Alkalilimnicola ehrlichii MLHE-1 multi-sensor signal transduction histidine kinase YP_743454.1 2972808 R 187272 CDS YP_743455.1 114321772 4270670 complement(2974979..2975569) 1 NC_008340.1 KEGG: mca:MCA2846 hypothetical protein; hypothetical protein 2975569 4270670 Mlg_2625 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743455.1 2974979 R 187272 CDS YP_743456.1 114321773 4270671 complement(2975566..2976879) 1 NC_008340.1 TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: pae:PA0017 Sun protein; sun protein 2976879 4270671 Mlg_2626 Alkalilimnicola ehrlichii MLHE-1 sun protein YP_743456.1 2975566 R 187272 CDS YP_743457.1 114321774 4270672 complement(2976883..2977827) 1 NC_008340.1 TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: mca:MCA2844 methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase 2977827 4270672 Mlg_2627 Alkalilimnicola ehrlichii MLHE-1 methionyl-tRNA formyltransferase YP_743457.1 2976883 R 187272 CDS YP_743458.1 114321775 4270673 complement(2977824..2978360) 1 NC_008340.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 2978360 def 4270673 def Alkalilimnicola ehrlichii MLHE-1 peptide deformylase YP_743458.1 2977824 R 187272 CDS YP_743459.1 114321776 4270674 2978528..2979544 1 NC_008340.1 PFAM: Peptidoglycan-binding LysM; KEGG: hch:HCH_00031 uncharacterized protein containing LysM domain; peptidoglycan-binding protein LysM 2979544 4270674 Mlg_2629 Alkalilimnicola ehrlichii MLHE-1 peptidoglycan-binding protein LysM YP_743459.1 2978528 D 187272 CDS YP_743460.1 114321777 4270675 2979568..2980707 1 NC_008340.1 TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: noc:Noc_3012 smf protein; DNA protecting protein DprA 2980707 4270675 Mlg_2630 Alkalilimnicola ehrlichii MLHE-1 DNA protecting protein DprA YP_743460.1 2979568 D 187272 CDS YP_743461.1 114321778 4270676 2980707..2981180 1 NC_008340.1 PFAM: protein of unknown function DUF494; KEGG: xoo:XOO0582 Smg; hypothetical protein 2981180 4270676 Mlg_2631 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743461.1 2980707 D 187272 CDS YP_743462.1 114321779 4270677 2981243..2983636 1 NC_008340.1 decatenates replicating daughter chromosomes; DNA topoisomerase I 2983636 4270677 Mlg_2632 Alkalilimnicola ehrlichii MLHE-1 DNA topoisomerase I YP_743462.1 2981243 D 187272 CDS YP_743463.1 114321780 4270678 2983713..2984285 1 NC_008340.1 PFAM: SUA5/yciO/yrdC, N-terminal domain; KEGG: csa:Csal_2864 SUA5/YciO/YrdC-like protein; SUA5/yciO/yrdC-like protein 2984285 4270678 Mlg_2633 Alkalilimnicola ehrlichii MLHE-1 SUA5/yciO/yrdC-like protein YP_743463.1 2983713 D 187272 CDS YP_743464.1 114321781 4270679 2984946..2985860 1 NC_008340.1 catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase 2985860 4270679 Mlg_2634 Alkalilimnicola ehrlichii MLHE-1 coproporphyrinogen III oxidase YP_743464.1 2984946 D 187272 CDS YP_743465.1 114321782 4270680 2985879..2986334 1 NC_008340.1 PFAM: globin; KEGG: bmb:BruAb2_0335 hypothetical protein; globin 2986334 4270680 Mlg_2635 Alkalilimnicola ehrlichii MLHE-1 globin YP_743465.1 2985879 D 187272 CDS YP_743466.1 114321783 4270681 complement(2986341..2987342) 1 NC_008340.1 PFAM: Inositol phosphatase/fructose-1,6-bisphosphatase; KEGG: rfr:Rfer_2704 inositol phosphatase/fructose-1,6-bisphosphatase; D-fructose 1,6-bisphosphatase 2987342 4270681 Mlg_2636 Alkalilimnicola ehrlichii MLHE-1 D-fructose 1,6-bisphosphatase YP_743466.1 2986341 R 187272 CDS YP_743467.1 114321784 4270682 complement(2987446..2988693) 1 NC_008340.1 PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain protein; KEGG: csa:Csal_0018 three-deoxy-D-manno-octulosonic-acid transferase-like protein; 3-deoxy-D-manno-octulosonic-acid transferase 2988693 4270682 Mlg_2637 Alkalilimnicola ehrlichii MLHE-1 3-deoxy-D-manno-octulosonic-acid transferase YP_743467.1 2987446 R 187272 CDS YP_743468.1 114321785 4270683 complement(2988976..2989899) 1 NC_008340.1 TIGRFAM: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase; PFAM: lipid A biosynthesis acyltransferase; KEGG: pfo:Pfl_1696 lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase; lipid A biosynthesis lauroyl acyltransferase 2989899 4270683 Mlg_2638 Alkalilimnicola ehrlichii MLHE-1 lipid A biosynthesis lauroyl acyltransferase YP_743468.1 2988976 R 187272 CDS YP_743469.1 114321786 4270684 complement(2989944..2991329) 1 NC_008340.1 TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: mca:MCA1277 outer membrane protein TolC; TolC family type I secretion outer membrane protein 2991329 4270684 Mlg_2639 Alkalilimnicola ehrlichii MLHE-1 TolC family type I secretion outer membrane protein YP_743469.1 2989944 R 187272 CDS YP_743470.1 114321787 4270685 complement(2991352..2992014) 1 NC_008340.1 PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; KEGG: rme:Rmet_2709 protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate(D-aspartate) O-methyltransferase 2992014 4270685 Mlg_2640 Alkalilimnicola ehrlichii MLHE-1 protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_743470.1 2991352 R 187272 CDS YP_743471.1 114321788 4270686 2992317..2992553 1 NC_008340.1 PFAM: ribosomal protein L28; KEGG: pcr:Pcryo_1989 ribosomal protein L28; 50S ribosomal protein L28 2992553 4270686 Mlg_2641 Alkalilimnicola ehrlichii MLHE-1 50S ribosomal protein L28 YP_743471.1 2992317 D 187272 CDS YP_743472.1 114321789 4268532 2992569..2992724 1 NC_008340.1 PFAM: ribosomal protein L33; KEGG: csa:Csal_2970 ribosomal protein L33; 50S ribosomal protein L33 2992724 4268532 Mlg_2642 Alkalilimnicola ehrlichii MLHE-1 50S ribosomal protein L33 YP_743472.1 2992569 D 187272 CDS YP_743473.1 114321790 4268533 complement(2992801..2993256) 1 NC_008340.1 PFAM: protein of unknown function DUF411; KEGG: vch:VC2216 hypothetical protein; hypothetical protein 2993256 4268533 Mlg_2643 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743473.1 2992801 R 187272 CDS YP_743474.1 114321791 4268534 complement(2993351..2995306) 1 NC_008340.1 PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: pca:Pcar_3103 N-methylhydantoinase A; 5-oxoprolinase 2995306 4268534 Mlg_2644 Alkalilimnicola ehrlichii MLHE-1 5-oxoprolinase YP_743474.1 2993351 R 187272 CDS YP_743475.1 114321792 4268535 2995363..2996340 1 NC_008340.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mca:MCA3078 ABC transporter, ATP-binding protein; ABC transporter-like protein 2996340 4268535 Mlg_2645 Alkalilimnicola ehrlichii MLHE-1 ABC transporter-like protein YP_743475.1 2995363 D 187272 CDS YP_743476.1 114321793 4268536 2996337..2997089 1 NC_008340.1 KEGG: noc:Noc_2645 ABC transporter, permease; ABC transporter, permease 2997089 4268536 Mlg_2646 Alkalilimnicola ehrlichii MLHE-1 ABC transporter, permease YP_743476.1 2996337 D 187272 CDS YP_743477.1 114321794 4268537 2997101..2998414 1 NC_008340.1 KEGG: mca:MCA3076 hypothetical protein; hypothetical protein 2998414 4268537 Mlg_2647 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743477.1 2997101 D 187272 CDS YP_743478.1 114321795 4268538 2998414..2998914 1 NC_008340.1 KEGG: noc:Noc_2647 hypothetical protein; hypothetical protein 2998914 4268538 Mlg_2648 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743478.1 2998414 D 187272 CDS YP_743479.1 114321796 4268539 2998948..2999781 1 NC_008340.1 KEGG: mca:MCA3072 formamidopyrimidine-DNA glycosylase; TIGRFAM: formamidopyrimidine-DNA glycosylase; PFAM: Formamidopyrimidine-DNA glycolase; formamidopyrimidine-DNA glycosylase/DNA-(apurinic or apyrimidinic site) lyase 2999781 4268539 Mlg_2649 Alkalilimnicola ehrlichii MLHE-1 formamidopyrimidine-DNA glycosylase/DNA-(apurinic or apyrimidinic site) lyase YP_743479.1 2998948 D 187272 CDS YP_743480.1 114321797 4268540 complement(2999792..3001453) 1 NC_008340.1 PFAM: AMP-dependent synthetase and ligase; KEGG: dps:DP2097 probable acetyl-CoA synthetase; AMP-dependent synthetase/ligase 3001453 4268540 Mlg_2650 Alkalilimnicola ehrlichii MLHE-1 AMP-dependent synthetase/ligase YP_743480.1 2999792 R 187272 CDS YP_743481.1 114321798 4268541 3001624..3002691 1 NC_008340.1 PFAM: permease; KEGG: cps:CPS_4074 permease; permease 3002691 4268541 Mlg_2651 Alkalilimnicola ehrlichii MLHE-1 permease YP_743481.1 3001624 D 187272 CDS YP_743482.1 114321799 4268542 complement(3002632..3004311) 1 NC_008340.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sde:Sde_0078 GGDEF domain protein; diguanylate cyclase 3004311 4268542 Mlg_2652 Alkalilimnicola ehrlichii MLHE-1 diguanylate cyclase YP_743482.1 3002632 R 187272 CDS YP_743483.1 114321800 4268543 3004477..3005670 1 NC_008340.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mag:amb2752 FOG: GGDEF domain; diguanylate cyclase 3005670 4268543 Mlg_2653 Alkalilimnicola ehrlichii MLHE-1 diguanylate cyclase YP_743483.1 3004477 D 187272 CDS YP_743484.1 114321801 4268544 complement(3005680..3007341) 1 NC_008340.1 KEGG: noc:Noc_0769 gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase 1 3007341 4268544 Mlg_2654 Alkalilimnicola ehrlichii MLHE-1 gamma-glutamyltransferase 1 YP_743484.1 3005680 R 187272 CDS YP_743485.1 114321802 4268545 complement(3007344..3007868) 1 NC_008340.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 3007868 coaD 4268545 coaD Alkalilimnicola ehrlichii MLHE-1 phosphopantetheine adenylyltransferase YP_743485.1 3007344 R 187272 CDS YP_743486.1 114321803 4268546 complement(3007908..3008486) 1 NC_008340.1 TIGRFAM: methyltransferase; PFAM: conserved hypothetical protein 95; methyltransferase small; KEGG: noc:Noc_1931 conserved hypothetical protein 95; methyltransferase 3008486 4268546 Mlg_2656 Alkalilimnicola ehrlichii MLHE-1 methyltransferase YP_743486.1 3007908 R 187272 CDS YP_743487.1 114321804 4268547 complement(3008483..3009928) 1 NC_008340.1 PFAM: peptidase M16 domain protein; KEGG: mca:MCA0064 hypothetical protein; peptidase M16 domain-containing protein 3009928 4268547 Mlg_2657 Alkalilimnicola ehrlichii MLHE-1 peptidase M16 domain-containing protein YP_743487.1 3008483 R 187272 CDS YP_743488.1 114321805 4268548 complement(3009925..3011307) 1 NC_008340.1 PFAM: peptidase M16 domain protein; KEGG: mca:MCA0063 peptidase, M16 family; peptidase M16 domain-containing protein 3011307 4268548 Mlg_2658 Alkalilimnicola ehrlichii MLHE-1 peptidase M16 domain-containing protein YP_743488.1 3009925 R 187272 CDS YP_743489.1 114321806 4268549 3011497..3012666 1 NC_008340.1 KEGG: csa:Csal_2989 signal recognition particle-docking protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54, G- domain; SMART: AAA ATPase; signal recognition particle-docking protein FtsY 3012666 4268549 Mlg_2659 Alkalilimnicola ehrlichii MLHE-1 signal recognition particle-docking protein FtsY YP_743489.1 3011497 D 187272 CDS YP_743490.1 114321807 4268793 3012663..3013337 1 NC_008340.1 KEGG: hch:HCH_00573 predicted ATPase involved in cell division; TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: AAA ATPase; cell division ATP-binding protein FtsE 3013337 4268793 Mlg_2660 Alkalilimnicola ehrlichii MLHE-1 cell division ATP-binding protein FtsE YP_743490.1 3012663 D 187272 CDS YP_743491.1 114321808 4268794 3013337..3014284 1 NC_008340.1 PFAM: protein of unknown function DUF214; KEGG: hch:HCH_00574 cell division protein; cell division protein FtsX 3014284 4268794 Mlg_2661 Alkalilimnicola ehrlichii MLHE-1 cell division protein FtsX YP_743491.1 3013337 D 187272 CDS YP_743492.1 114321809 4268795 3014489..3015346 1 NC_008340.1 TIGRFAM: RNA polymerase sigma factor RpoH; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: pae:PA0376 sigma factor RpoH; RNA polymerase sigma-32 subunit RpoH 3015346 4268795 Mlg_2662 Alkalilimnicola ehrlichii MLHE-1 RNA polymerase sigma-32 subunit RpoH YP_743492.1 3014489 D 187272 CDS YP_743493.1 114321810 4268796 complement(3015450..3015671) 1 NC_008340.1 hypothetical protein 3015671 4268796 Mlg_2663 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743493.1 3015450 R 187272 CDS YP_743494.1 114321811 4268797 complement(3015715..3016389) 1 NC_008340.1 Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC 3016389 radC 4268797 radC Alkalilimnicola ehrlichii MLHE-1 DNA repair protein RadC YP_743494.1 3015715 R 187272 CDS YP_743495.1 114321812 4268798 3016787..3018565 1 NC_008340.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 3018565 aspS 4268798 aspS Alkalilimnicola ehrlichii MLHE-1 aspartyl-tRNA synthetase YP_743495.1 3016787 D 187272 CDS YP_743496.1 114321813 4268799 3018626..3019339 1 NC_008340.1 PFAM: Ankyrin; KEGG: xcv:XCV0710 hypothetical protein; ankyrin 3019339 4268799 Mlg_2666 Alkalilimnicola ehrlichii MLHE-1 ankyrin YP_743496.1 3018626 D 187272 CDS YP_743497.1 114321814 4268800 complement(3019405..3020712) 1 NC_008340.1 PFAM: TPR repeat-containing protein; HemY domain protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: cbu:CBU_2081 HemY protein; HemY domain-containing protein 3020712 4268800 Mlg_2667 Alkalilimnicola ehrlichii MLHE-1 HemY domain-containing protein YP_743497.1 3019405 R 187272 CDS YP_743498.1 114321815 4268801 complement(3020731..3021942) 1 NC_008340.1 PFAM: protein of unknown function DUF513, hemX; KEGG: noc:Noc_0504 protein of unknown function DUF513, HemX; hypothetical protein 3021942 4268801 Mlg_2668 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743498.1 3020731 R 187272 CDS YP_743499.1 114321816 4268802 complement(3021949..3022734) 1 NC_008340.1 PFAM: Uroporphyrinogen III synthase HEM4; KEGG: neu:NE0591 uroporphyrinogen III synthase HEM4; uroporphyrinogen-III synthase 3022734 4268802 Mlg_2669 Alkalilimnicola ehrlichii MLHE-1 uroporphyrinogen-III synthase YP_743499.1 3021949 R 187272 CDS YP_743500.1 114321817 4268803 complement(3022737..3023663) 1 NC_008340.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 3023663 hemC 4268803 hemC Alkalilimnicola ehrlichii MLHE-1 porphobilinogen deaminase YP_743500.1 3022737 R 187272 CDS YP_743501.1 114321818 4268804 complement(3023772..3024503) 1 NC_008340.1 PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: psp:PSPPH_0069 alginate biosynthesis regulatory protein AlgR; response regulator receiver protein 3024503 4268804 Mlg_2671 Alkalilimnicola ehrlichii MLHE-1 response regulator receiver protein YP_743501.1 3023772 R 187272 CDS YP_743502.1 114321819 4268805 complement(3024507..3025547) 1 NC_008340.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase internal region; KEGG: psp:PSPPH_0070 sensor histidine kinase FimS; sensory transduction protein kinase AlgZ 3025547 4268805 Mlg_2672 Alkalilimnicola ehrlichii MLHE-1 sensory transduction protein kinase AlgZ YP_743502.1 3024507 R 187272 CDS YP_743503.1 114321820 4268806 3025681..3027087 1 NC_008340.1 catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 3027087 4268806 Mlg_2673 Alkalilimnicola ehrlichii MLHE-1 argininosuccinate lyase YP_743503.1 3025681 D 187272 CDS YP_743504.1 114321821 4268807 complement(3027388..3027888) 1 NC_008340.1 PFAM: CBS domain containing protein; KEGG: ppr:PBPRA1175 hypothetical protein; signal transduction protein 3027888 4268807 Mlg_2674 Alkalilimnicola ehrlichii MLHE-1 signal transduction protein YP_743504.1 3027388 R 187272 CDS YP_743505.1 114321822 4268808 3028006..3030528 1 NC_008340.1 KEGG: mag:amb1214 predicted signal transduction protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; CBS domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 3030528 4268808 Mlg_2675 Alkalilimnicola ehrlichii MLHE-1 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_743505.1 3028006 D 187272 CDS YP_743506.1 114321823 4268809 complement(3030615..3030818) 1 NC_008340.1 PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: ade:Adeh_0252 cold-shock DNA-binding domain protein; cold-shock DNA-binding protein family protein 3030818 4268809 Mlg_2676 Alkalilimnicola ehrlichii MLHE-1 cold-shock DNA-binding protein family protein YP_743506.1 3030615 R 187272 CDS YP_743507.1 114321824 4269552 3031106..3032089 1 NC_008340.1 hypothetical protein 3032089 4269552 Mlg_2677 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743507.1 3031106 D 187272 CDS YP_743508.1 114321825 4269553 3032302..3033309 1 NC_008340.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: eba:ebA1639 predicted nucleoside-diphosphate-sugar epimerase; NAD-dependent epimerase/dehydratase 3033309 4269553 Mlg_2678 Alkalilimnicola ehrlichii MLHE-1 NAD-dependent epimerase/dehydratase YP_743508.1 3032302 D 187272 CDS YP_743509.1 114321826 4269554 3033708..3035105 1 NC_008340.1 PFAM: major facilitator superfamily MFS_1; KEGG: csa:Csal_2143 major facilitator superfamily MFS_1; major facilitator transporter 3035105 4269554 Mlg_2679 Alkalilimnicola ehrlichii MLHE-1 major facilitator transporter YP_743509.1 3033708 D 187272 CDS YP_743510.1 114321827 4269555 3035346..3035966 1 NC_008340.1 KEGG: csa:Csal_2599 beta-lactamase-like protein; beta-lactamase-like protein 3035966 4269555 Mlg_2680 Alkalilimnicola ehrlichii MLHE-1 beta-lactamase-like protein YP_743510.1 3035346 D 187272 CDS YP_743511.1 114321828 4269556 complement(3035976..3037223) 1 NC_008340.1 PFAM: peptidase M42 family protein; KEGG: dge:Dgeo_1994 peptidase M42; peptidase M42 family protein 3037223 4269556 Mlg_2681 Alkalilimnicola ehrlichii MLHE-1 peptidase M42 family protein YP_743511.1 3035976 R 187272 CDS YP_743512.1 114321829 4269557 3037765..3039360 1 NC_008340.1 Catalyzes the first step in the glyoxalate cycle, which converts lipids to carbohydrates; isocitrate lyase 3039360 4269557 Mlg_2682 Alkalilimnicola ehrlichii MLHE-1 isocitrate lyase YP_743512.1 3037765 D 187272 CDS YP_743513.1 114321830 4269558 complement(3039469..3042540) 1 NC_008340.1 KEGG: rfr:Rfer_1983 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 3042540 4269558 Mlg_2683 Alkalilimnicola ehrlichii MLHE-1 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_743513.1 3039469 R 187272 CDS YP_743514.1 114321831 4269559 complement(3042569..3043492) 1 NC_008340.1 KEGG: dvu:DVU0120 ABC transporter, substrate-binding protein; ABC transporter, substrate-binding protein 3043492 4269559 Mlg_2684 Alkalilimnicola ehrlichii MLHE-1 ABC transporter, substrate-binding protein YP_743514.1 3042569 R 187272 CDS YP_743515.1 114321832 4269560 complement(3043584..3044171) 1 NC_008340.1 KEGG: ilo:IL1543 hypothetical protein; hypothetical protein 3044171 4269560 Mlg_2685 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743515.1 3043584 R 187272 CDS YP_743516.1 114321833 4269562 3044406..3045569 1 NC_008340.1 PFAM: regulatory protein, LuxR; KEGG: bur:Bcep18194_B0664 transcriptional regulator, LuxR family; LuxR family transcriptional regulator 3045569 4269562 Mlg_2686 Alkalilimnicola ehrlichii MLHE-1 LuxR family transcriptional regulator YP_743516.1 3044406 D 187272 CDS YP_743517.1 114321834 4269563 3045707..3048172 1 NC_008340.1 PFAM: regulator of chromosome condensation, RCC1; KEGG: gsu:GSU1251 BNR repeat domain protein; regulator of chromosome condensation, RCC1 3048172 4269563 Mlg_2687 Alkalilimnicola ehrlichii MLHE-1 regulator of chromosome condensation, RCC1 YP_743517.1 3045707 D 187272 CDS YP_743518.1 114321835 4269564 3048322..3050778 1 NC_008340.1 PFAM: regulator of chromosome condensation, RCC1; KEGG: gsu:GSU1251 BNR repeat domain protein; regulator of chromosome condensation, RCC1 3050778 4269564 Mlg_2688 Alkalilimnicola ehrlichii MLHE-1 regulator of chromosome condensation, RCC1 YP_743518.1 3048322 D 187272 CDS YP_743519.1 114321836 4269565 3050878..3051393 1 NC_008340.1 TIGRFAM: molybdenum cofactor synthesis domain; molybdenum cofactor biosynthesis protein B; PFAM: molybdopterin binding domain; KEGG: csa:Csal_1919 molybdopterin binding protein; molybdenum cofactor biosynthesis protein B 3051393 4269565 Mlg_2689 Alkalilimnicola ehrlichii MLHE-1 molybdenum cofactor biosynthesis protein B YP_743519.1 3050878 D 187272 CDS YP_743520.1 114321837 4269566 3051474..3052595 1 NC_008340.1 PFAM: Squalene/phytoene synthase; KEGG: neu:NE1958 squalene and phytoene synthase; farnesyl-diphosphate farnesyltransferase 3052595 4269566 Mlg_2690 Alkalilimnicola ehrlichii MLHE-1 farnesyl-diphosphate farnesyltransferase YP_743520.1 3051474 D 187272 CDS YP_743521.1 114321838 4269567 3052599..3053480 1 NC_008340.1 PFAM: aminoglycoside phosphotransferase; fructosamine kinase; KEGG: syf:Synpcc7942_1985 hypothetical protein; fructosamine kinase 3053480 4269567 Mlg_2691 Alkalilimnicola ehrlichii MLHE-1 fructosamine kinase YP_743521.1 3052599 D 187272 CDS YP_743522.1 114321839 4269568 complement(3053481..3054101) 1 NC_008340.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sme:SMa0279 hypothetical protein; type 11 methyltransferase 3054101 4269568 Mlg_2692 Alkalilimnicola ehrlichii MLHE-1 type 11 methyltransferase YP_743522.1 3053481 R 187272 CDS YP_743523.1 114321840 4269936 complement(3054205..3054699) 1 NC_008340.1 KEGG: gvi:gll1070 unknown protein; hypothetical protein 3054699 4269936 Mlg_2693 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743523.1 3054205 R 187272 CDS YP_743524.1 114321841 4269937 3054897..3056996 1 NC_008340.1 PFAM: AsmA family protein; KEGG: noc:Noc_2265 conserved hypothetical protein, AsmA; AsmA family protein 3056996 4269937 Mlg_2694 Alkalilimnicola ehrlichii MLHE-1 AsmA family protein YP_743524.1 3054897 D 187272 CDS YP_743525.1 114321842 4269938 3056996..3058081 1 NC_008340.1 KEGG: noc:Noc_2267 A/G-specific adenine glycosylase MutY; TIGRFAM: A/G-specific adenine glycosylase; PFAM: NUDIX hydrolase; helix-hairpin-helix motif; HhH-GPD family protein; SMART: iron-sulfur cluster loop; A/G-specific adenine glycosylase 3058081 4269938 Mlg_2695 Alkalilimnicola ehrlichii MLHE-1 A/G-specific adenine glycosylase YP_743525.1 3056996 D 187272 CDS YP_743526.1 114321843 4269939 3058078..3058344 1 NC_008340.1 PFAM: Fe(II) trafficking protein YggX; KEGG: noc:Noc_2268 Fe(II) trafficking protein YggX; hypothetical protein 3058344 4269939 Mlg_2696 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743526.1 3058078 D 187272 CDS YP_743527.1 114321844 4269941 3058564..3059280 1 NC_008340.1 TIGRFAM: exsB protein; PFAM: ExsB family protein; KEGG: gox:GOX1542 aluminum resistance protein; exoenzyme S synthesis protein B 3059280 4269941 Mlg_2697 Alkalilimnicola ehrlichii MLHE-1 exoenzyme S synthesis protein B YP_743527.1 3058564 D 187272 CDS YP_743528.1 114321845 4269942 3059338..3062229 1 NC_008340.1 PFAM: glutamate-ammonia ligase adenylyltransferase; KEGG: noc:Noc_0135 glutamate-ammonia-ligase adenylyltransferase; (glutamate--ammonia-ligase) adenylyltransferase 3062229 4269942 Mlg_2698 Alkalilimnicola ehrlichii MLHE-1 (glutamate--ammonia-ligase) adenylyltransferase YP_743528.1 3059338 D 187272 CDS YP_743529.1 114321846 4269943 3062318..3063238 1 NC_008340.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 3063238 4269943 Mlg_2699 Alkalilimnicola ehrlichii MLHE-1 branched-chain amino acid aminotransferase YP_743529.1 3062318 D 187272 CDS YP_743530.1 114321847 4269944 complement(3063290..3063556) 1 NC_008340.1 hypothetical protein 3063556 4269944 Mlg_2700 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743530.1 3063290 R 187272 CDS YP_743531.1 114321848 4269945 complement(3063606..3065441) 1 NC_008340.1 PFAM: Na+/Pi-cotransporter; KEGG: tdn:Tmden_1943 Na+/Pi-cotransporter; Na+/Pi-cotransporter 3065441 4269945 Mlg_2701 Alkalilimnicola ehrlichii MLHE-1 Na+/Pi-cotransporter YP_743531.1 3063606 R 187272 CDS YP_743532.1 114321849 4269946 complement(3065578..3068730) 1 NC_008340.1 proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichia coli this protein self regulates transcription via a DNA-binding domain at the N-terminus but the proteins from this group do not and in addition appear to have a truncated C-terminal domain; bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 3068730 4269946 Mlg_2702 Alkalilimnicola ehrlichii MLHE-1 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase YP_743532.1 3065578 R 187272 CDS YP_743533.1 114321850 4269947 3068793..3070124 1 NC_008340.1 KEGG: gsu:GSU1615 hypothetical protein; hypothetical protein 3070124 4269947 Mlg_2703 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743533.1 3068793 D 187272 CDS YP_743534.1 114321851 4269948 3070346..3071065 1 NC_008340.1 hypothetical protein 3071065 4269948 Mlg_2704 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743534.1 3070346 D 187272 CDS YP_743535.1 114321852 4269949 3071239..3071841 1 NC_008340.1 hypothetical protein 3071841 4269949 Mlg_2705 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743535.1 3071239 D 187272 CDS YP_743536.1 114321853 4269950 complement(3071915..3073099) 1 NC_008340.1 KEGG: reu:Reut_B4738 thiolase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase; acetyl-CoA acetyltransferase 3073099 4269950 Mlg_2706 Alkalilimnicola ehrlichii MLHE-1 acetyl-CoA acetyltransferase YP_743536.1 3071915 R 187272 CDS YP_743537.1 114321854 4269951 complement(3073235..3074074) 1 NC_008340.1 PFAM: UspA domain protein; KEGG: tko:TK2034 universal stress protein; UspA domain-containing protein 3074074 4269951 Mlg_2707 Alkalilimnicola ehrlichii MLHE-1 UspA domain-containing protein YP_743537.1 3073235 R 187272 CDS YP_743538.1 114321855 4269499 complement(3074105..3074425) 1 NC_008340.1 KEGG: sru:SRU_2459 hypothetical protein; hypothetical protein 3074425 4269499 Mlg_2708 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743538.1 3074105 R 187272 CDS YP_743539.1 114321856 4269500 complement(3074422..3075537) 1 NC_008340.1 PFAM: Bile acid:sodium symporter; KEGG: sru:SRU_2460 hypothetical protein; bile acid:sodium symporter 3075537 4269500 Mlg_2709 Alkalilimnicola ehrlichii MLHE-1 bile acid:sodium symporter YP_743539.1 3074422 R 187272 CDS YP_743540.1 114321857 4269501 complement(3075534..3077249) 1 NC_008340.1 KEGG: rba:RB9551 ArsA-catalytic subunit of arsenic oxyanion-translocating ATPase; TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase; SMART: AAA ATPase; arsenite-activated ATPase ArsA 3077249 4269501 Mlg_2710 Alkalilimnicola ehrlichii MLHE-1 arsenite-activated ATPase ArsA YP_743540.1 3075534 R 187272 CDS YP_743541.1 114321858 4269502 complement(3077358..3077735) 1 NC_008340.1 PFAM: Arsenical resistance operon trans-acting repressor ArsD; KEGG: mfa:Mfla_1492 arsenical resistance operon trans-acting repressor ArsD; arsenical resistance operon trans-acting repressor ArsD 3077735 4269502 Mlg_2711 Alkalilimnicola ehrlichii MLHE-1 arsenical resistance operon trans-acting repressor ArsD YP_743541.1 3077358 R 187272 CDS YP_743542.1 114321859 4269503 complement(3077810..3078232) 1 NC_008340.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: gka:GK0589 arsenate reductase; protein tyrosine phosphatase 3078232 4269503 Mlg_2712 Alkalilimnicola ehrlichii MLHE-1 protein tyrosine phosphatase YP_743542.1 3077810 R 187272 CDS YP_743543.1 114321860 4269504 complement(3078251..3078595) 1 NC_008340.1 PFAM: regulatory protein, ArsR; KEGG: hch:HCH_04651 predicted transcriptional regulator; ArsR family transcriptional regulator 3078595 4269504 Mlg_2713 Alkalilimnicola ehrlichii MLHE-1 ArsR family transcriptional regulator YP_743543.1 3078251 R 187272 CDS YP_743544.1 114321861 4269505 3078719..3079390 1 NC_008340.1 PFAM: NADPH-dependent FMN reductase; KEGG: ilo:IL2128 predicted flavoprotein; NADPH-dependent FMN reductase 3079390 4269505 Mlg_2714 Alkalilimnicola ehrlichii MLHE-1 NADPH-dependent FMN reductase YP_743544.1 3078719 D 187272 CDS YP_743545.1 114321862 4269506 3079498..3080466 1 NC_008340.1 KEGG: sco:SCO4963 ABC transporter ATP-binding protein; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; daunorubicin resistance ABC transporter ATPase subunit 3080466 4269506 Mlg_2715 Alkalilimnicola ehrlichii MLHE-1 daunorubicin resistance ABC transporter ATPase subunit YP_743545.1 3079498 D 187272 CDS YP_743546.1 114321863 4269507 3080463..3081227 1 NC_008340.1 PFAM: ABC-2 type transporter; KEGG: ade:Adeh_3916 ABC transporter, inner membrane subunit; ABC-2 type transporter 3081227 4269507 Mlg_2716 Alkalilimnicola ehrlichii MLHE-1 ABC-2 type transporter YP_743546.1 3080463 D 187272 CDS YP_743547.1 114321864 4269508 complement(3081328..3081702) 1 NC_008340.1 hypothetical protein 3081702 4269508 Mlg_2717 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743547.1 3081328 R 187272 CDS YP_743548.1 114321865 4269510 3082145..3082519 1 NC_008340.1 KEGG: rfr:Rfer_2852 di-heme cytochrome c; hypothetical protein 3082519 4269510 Mlg_2718 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743548.1 3082145 D 187272 CDS YP_743549.1 114321866 4269511 3082948..3084441 1 NC_008340.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: csa:Csal_2764 sulphate transporter; sulfate transporter 3084441 4269511 Mlg_2719 Alkalilimnicola ehrlichii MLHE-1 sulfate transporter YP_743549.1 3082948 D 187272 CDS YP_743550.1 114321867 4269512 3084479..3085333 1 NC_008340.1 PFAM: UspA domain protein; KEGG: csa:Csal_2763 UspA; UspA domain-containing protein 3085333 4269512 Mlg_2720 Alkalilimnicola ehrlichii MLHE-1 UspA domain-containing protein YP_743550.1 3084479 D 187272 CDS YP_743551.1 114321868 4269513 complement(3085422..3086480) 1 NC_008340.1 TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: transferase hexapeptide repeat containing protein; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD; KEGG: pfo:Pfl_1111 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase, LpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 3086480 4269513 Mlg_2721 Alkalilimnicola ehrlichii MLHE-1 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_743551.1 3085422 R 187272 CDS YP_743552.1 114321869 4269514 3086771..3087415 1 NC_008340.1 PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: mca:MCA0777 DNA binding response regulator, LuxR family; LuxR family transcriptional regulator 3087415 4269514 Mlg_2722 Alkalilimnicola ehrlichii MLHE-1 LuxR family transcriptional regulator YP_743552.1 3086771 D 187272 CDS YP_743553.1 114321870 4269515 3087419..3088879 1 NC_008340.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: mfa:Mfla_0814 signal transduction histidine kinase, glucose-6-phosphate specific; glucose-6-phosphate specific signal transduction histidine kinase 3088879 4269515 Mlg_2723 Alkalilimnicola ehrlichii MLHE-1 glucose-6-phosphate specific signal transduction histidine kinase YP_743553.1 3087419 D 187272 CDS YP_743554.1 114321871 4270978 complement(3088799..3090928) 1 NC_008340.1 PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: ccr:CC0139 TonB-dependent receptor; TonB-dependent receptor 3090928 4270978 Mlg_2724 Alkalilimnicola ehrlichii MLHE-1 TonB-dependent receptor YP_743554.1 3088799 R 187272 CDS YP_743555.1 114321872 4270979 complement(3091196..3092440) 1 NC_008340.1 KEGG: mfa:Mfla_2453 hypothetical protein; hypothetical protein 3092440 4270979 Mlg_2725 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743555.1 3091196 R 187272 CDS YP_743556.1 114321873 4270980 3093025..3094545 1 NC_008340.1 PFAM: aldehyde dehydrogenase; KEGG: gka:GK0730 aldehyde dehydrogenase; aldehyde dehydrogenase 3094545 4270980 Mlg_2726 Alkalilimnicola ehrlichii MLHE-1 aldehyde dehydrogenase YP_743556.1 3093025 D 187272 CDS YP_743557.1 114321874 4270981 3094661..3095041 1 NC_008340.1 PFAM: protein of unknown function DUF779; KEGG: bha:BH0680 hypothetical protein; hypothetical protein 3095041 4270981 Mlg_2727 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743557.1 3094661 D 187272 CDS YP_743558.1 114321875 4270982 3095108..3097174 1 NC_008340.1 PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: csa:Csal_0094 TonB-dependent receptor; TonB-dependent receptor 3097174 4270982 Mlg_2728 Alkalilimnicola ehrlichii MLHE-1 TonB-dependent receptor YP_743558.1 3095108 D 187272 CDS YP_743559.1 114321876 4270983 3097561..3099369 1 NC_008340.1 PFAM: Pyrrolo-quinoline quinone; KEGG: sil:SPO1508 quinoprotein ethanol dehydrogenase; Pyrrolo-quinoline quinone 3099369 4270983 Mlg_2729 Alkalilimnicola ehrlichii MLHE-1 Pyrrolo-quinoline quinone YP_743559.1 3097561 D 187272 CDS YP_743560.1 114321877 4270984 3099470..3099916 1 NC_008340.1 KEGG: sil:SPO1515 cytochrome c550; cytochrome c550 3099916 4270984 Mlg_2730 Alkalilimnicola ehrlichii MLHE-1 cytochrome c550 YP_743560.1 3099470 D 187272 CDS YP_743561.1 114321878 4270985 3099903..3100919 1 NC_008340.1 SMART: extracellular solute-binding protein, family 3; KEGG: dar:Daro_1002 hypothetical protein; extracellular solute-binding protein 3100919 4270985 Mlg_2731 Alkalilimnicola ehrlichii MLHE-1 extracellular solute-binding protein YP_743561.1 3099903 D 187272 CDS YP_743562.1 114321879 4270986 3100952..3101719 1 NC_008340.1 KEGG: pfl:PFL_2219 hypothetical protein; hypothetical protein 3101719 4270986 Mlg_2732 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743562.1 3100952 D 187272 CDS YP_743563.1 114321880 4270987 3101716..3102693 1 NC_008340.1 PFAM: beta-lactamase domain protein; KEGG: pfl:PFL_2220 hydrolase; beta-lactamase domain-containing protein 3102693 4270987 Mlg_2733 Alkalilimnicola ehrlichii MLHE-1 beta-lactamase domain-containing protein YP_743563.1 3101716 D 187272 CDS YP_743564.1 114321881 4270988 3102680..3103318 1 NC_008340.1 SMART: Rhodanese domain protein; KEGG: bja:bll6194 hypothetical protein; rhodanese domain-containing protein 3103318 4270988 Mlg_2734 Alkalilimnicola ehrlichii MLHE-1 rhodanese domain-containing protein YP_743564.1 3102680 D 187272 CDS YP_743565.1 114321882 4270989 3103328..3103636 1 NC_008340.1 hypothetical protein 3103636 4270989 Mlg_2735 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743565.1 3103328 D 187272 CDS YP_743566.1 114321883 4270990 3103832..3105820 1 NC_008340.1 PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; GAF domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: pae:PA4021 probable transcriptional regulator; Fis family transcriptional regulator 3105820 4270990 Mlg_2736 Alkalilimnicola ehrlichii MLHE-1 Fis family transcriptional regulator YP_743566.1 3103832 D 187272 CDS YP_743567.1 114321884 4270991 complement(3105865..3107112) 1 NC_008340.1 PFAM: glucose sorbosone dehydrogenase; KEGG: sru:SRU_0451 pyrroloquinoline-quinone glucose dehydrogenase; glucose sorbosone dehydrogenase 3107112 4270991 Mlg_2737 Alkalilimnicola ehrlichii MLHE-1 glucose sorbosone dehydrogenase YP_743567.1 3105865 R 187272 CDS YP_743568.1 114321885 4270992 complement(3107204..3108010) 1 NC_008340.1 KEGG: mag:amb3044 ABC-type tungstate transport system, permease component; tungstate ABC transporter permease 3108010 4270992 Mlg_2738 Alkalilimnicola ehrlichii MLHE-1 tungstate ABC transporter permease YP_743568.1 3107204 R 187272 CDS YP_743569.1 114321886 4270993 complement(3108071..3108850) 1 NC_008340.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mag:amb3045 ABC-type polar amino acid transport system, ATPase component; ABC transporter-like protein 3108850 4270993 Mlg_2739 Alkalilimnicola ehrlichii MLHE-1 ABC transporter-like protein YP_743569.1 3108071 R 187272 CDS YP_743570.1 114321887 4270994 complement(3108853..3109551) 1 NC_008340.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mag:amb3046 ABC-type tungstate transport system, periplasmic component; binding-protein-dependent transport systems inner membrane component 3109551 4270994 Mlg_2740 Alkalilimnicola ehrlichii MLHE-1 binding-protein-dependent transport systems inner membrane component YP_743570.1 3108853 R 187272 CDS YP_743571.1 114321888 4270210 complement(3109733..3109933) 1 NC_008340.1 KEGG: gme:Gmet_3124 hypothetical protein; hypothetical protein 3109933 4270210 Mlg_2741 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743571.1 3109733 R 187272 CDS YP_743572.1 114321889 4270211 complement(3109979..3111352) 1 NC_008340.1 KEGG: hch:HCH_05426 hypothetical protein; hypothetical protein 3111352 4270211 Mlg_2742 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743572.1 3109979 R 187272 CDS YP_743573.1 114321890 4270212 complement(3111358..3112212) 1 NC_008340.1 KEGG: ilo:IL0172 probable outer membrane protein; outer membrane protein 3112212 4270212 Mlg_2743 Alkalilimnicola ehrlichii MLHE-1 outer membrane protein YP_743573.1 3111358 R 187272 CDS YP_743574.1 114321891 4270213 complement(3112236..3114818) 1 NC_008340.1 KEGG: ilo:IL0173 predicted exporter, RND superfamily; RND efflux transporter 3114818 4270213 Mlg_2744 Alkalilimnicola ehrlichii MLHE-1 RND efflux transporter YP_743574.1 3112236 R 187272 CDS YP_743575.1 114321892 4270214 3115020..3115922 1 NC_008340.1 TIGRFAM: DNA binding domain, excisionase; KEGG: mag:amb2274 periplasmic molybdate-binding protein/domain; DNA binding domain-containing protein 3115922 4270214 Mlg_2745 Alkalilimnicola ehrlichii MLHE-1 DNA binding domain-containing protein YP_743575.1 3115020 D 187272 CDS YP_743576.1 114321893 4270215 complement(3115940..3116404) 1 NC_008340.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: sde:Sde_0996 single-stranded DNA-binding protein; single-strand binding protein 3116404 4270215 Mlg_2746 Alkalilimnicola ehrlichii MLHE-1 single-strand binding protein YP_743576.1 3115940 R 187272 CDS YP_743577.1 114321894 4270216 complement(3116575..3117795) 1 NC_008340.1 PFAM: major facilitator superfamily MFS_1; KEGG: noc:Noc_3022 major facilitator superfamily MFS_1; major facilitator transporter 3117795 4270216 Mlg_2747 Alkalilimnicola ehrlichii MLHE-1 major facilitator transporter YP_743577.1 3116575 R 187272 CDS YP_743578.1 114321895 4270217 3117911..3120733 1 NC_008340.1 KEGG: mca:MCA2694 excinuclease ABC, A subunit; TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; SMART: AAA ATPase; excinuclease ABC subunit A 3120733 4270217 Mlg_2748 Alkalilimnicola ehrlichii MLHE-1 excinuclease ABC subunit A YP_743578.1 3117911 D 187272 CDS YP_743579.1 114321896 4270218 complement(3120797..3121585) 1 NC_008340.1 PFAM: glutamine amidotransferase class-I; peptidase C26; KEGG: dde:Dde_1620 glutamine amidotransferases-like; peptidase C26 3121585 4270218 Mlg_2749 Alkalilimnicola ehrlichii MLHE-1 peptidase C26 YP_743579.1 3120797 R 187272 CDS YP_743580.1 114321897 4270219 complement(3121561..3122586) 1 NC_008340.1 KEGG: dde:Dde_1621 hypothetical protein; hypothetical protein 3122586 4270219 Mlg_2750 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743580.1 3121561 R 187272 CDS YP_743581.1 114321898 4270220 3122760..3123014 1 NC_008340.1 RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 3123014 rpmE2 4270220 rpmE2 Alkalilimnicola ehrlichii MLHE-1 50S ribosomal protein L31 YP_743581.1 3122760 D 187272 CDS YP_743582.1 114321899 4270221 3123387..3124685 1 NC_008340.1 KEGG: rru:Rru_A1600 citrate synthase I; TIGRFAM: citrate synthase I; PFAM: Citrate synthase; citrate synthase 3124685 4270221 Mlg_2752 Alkalilimnicola ehrlichii MLHE-1 citrate synthase YP_743582.1 3123387 D 187272 CDS YP_743583.1 114321900 4270222 complement(3124757..3125401) 1 NC_008340.1 KEGG: noc:Noc_0245 hypothetical protein; hypothetical protein 3125401 4270222 Mlg_2753 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743583.1 3124757 R 187272 CDS YP_743584.1 114321901 4270223 complement(3125431..3127833) 1 NC_008340.1 KEGG: noc:Noc_0246 penicillin-binding protein 1A; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; 1A family penicillin-binding protein 3127833 4270223 Mlg_2754 Alkalilimnicola ehrlichii MLHE-1 1A family penicillin-binding protein YP_743584.1 3125431 R 187272 CDS YP_743585.1 114321902 4270224 3128016..3129083 1 NC_008340.1 TIGRFAM: type IV pilus assembly protein PilM; KEGG: pfo:Pfl_0405 type IV pilus assembly protein PilM; type IV pilus assembly protein PilM 3129083 4270224 Mlg_2755 Alkalilimnicola ehrlichii MLHE-1 type IV pilus assembly protein PilM YP_743585.1 3128016 D 187272 CDS YP_743586.1 114321903 4270225 3129080..3129634 1 NC_008340.1 PFAM: Fimbrial assembly family protein; KEGG: noc:Noc_0248 type 4 fimbrial biogenesis protein PilN; fimbrial assembly family protein 3129634 4270225 Mlg_2756 Alkalilimnicola ehrlichii MLHE-1 fimbrial assembly family protein YP_743586.1 3129080 D 187272 CDS YP_743587.1 114321904 4270226 3129655..3130239 1 NC_008340.1 PFAM: Pilus assembly protein, PilO; KEGG: eba:ebA2264 fimbrial type-IV assembly protein PilO; pilus assembly protein, PilO 3130239 4270226 Mlg_2757 Alkalilimnicola ehrlichii MLHE-1 pilus assembly protein, PilO YP_743587.1 3129655 D 187272 CDS YP_743588.1 114321905 4270227 3130242..3130787 1 NC_008340.1 PFAM: Pilus assembly protein, PilQ; KEGG: lpf:lpl0961 tfp pilus assembly protein PilP; pilus assembly protein, PilQ 3130787 4270227 Mlg_2758 Alkalilimnicola ehrlichii MLHE-1 pilus assembly protein, PilQ YP_743588.1 3130242 D 187272 CDS YP_743589.1 114321906 4269120 3130822..3132906 1 NC_008340.1 TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: noc:Noc_0251 fimbrial assembly protein PilQ precursor; type IV pilus secretin PilQ 3132906 4269120 Mlg_2759 Alkalilimnicola ehrlichii MLHE-1 type IV pilus secretin PilQ YP_743589.1 3130822 D 187272 CDS YP_743590.1 114321907 4269121 3132974..3134986 1 NC_008340.1 PFAM: Ig domain protein, group 1 domain protein; KEGG: rfr:Rfer_2924 Ig-like, group 1; Ig domain-containing protein 3134986 4269121 Mlg_2760 Alkalilimnicola ehrlichii MLHE-1 Ig domain-containing protein YP_743590.1 3132974 D 187272 CDS YP_743591.1 114321908 4269122 3135148..3135687 1 NC_008340.1 PFAM: shikimate kinase; KEGG: aci:ACIAD3354 shikimate-kinase; shikimate kinase 3135687 4269122 Mlg_2761 Alkalilimnicola ehrlichii MLHE-1 shikimate kinase YP_743591.1 3135148 D 187272 CDS YP_743592.1 114321909 4269123 3135684..3136778 1 NC_008340.1 PFAM: 3-dehydroquinate synthase; KEGG: mca:MCA0331 3-dehydroquinate synthase; 3-dehydroquinate synthase 3136778 4269123 Mlg_2762 Alkalilimnicola ehrlichii MLHE-1 3-dehydroquinate synthase YP_743592.1 3135684 D 187272 CDS YP_743593.1 114321910 4269124 3137088..3141563 1 NC_008340.1 catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate; glutamate synthase subunit alpha 3141563 gltB 4269124 gltB Alkalilimnicola ehrlichii MLHE-1 glutamate synthase subunit alpha YP_743593.1 3137088 D 187272 CDS YP_743594.1 114321911 4269125 3141622..3143031 1 NC_008340.1 glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta 3143031 gltD 4269125 gltD Alkalilimnicola ehrlichii MLHE-1 glutamate synthase subunit beta YP_743594.1 3141622 D 187272 CDS YP_743595.1 114321912 4269126 3143468..3144565 1 NC_008340.1 KEGG: sde:Sde_2681 uroporphyrinogen decarboxylase; TIGRFAM: uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D); uroporphyrinogen decarboxylase 3144565 4269126 Mlg_2765 Alkalilimnicola ehrlichii MLHE-1 uroporphyrinogen decarboxylase YP_743595.1 3143468 D 187272 CDS YP_743596.1 114321913 4269127 3144597..3145031 1 NC_008340.1 PFAM: NUDIX hydrolase; KEGG: tbd:Tbd_2635 hypothetical protein; NUDIX hydrolase 3145031 4269127 Mlg_2766 Alkalilimnicola ehrlichii MLHE-1 NUDIX hydrolase YP_743596.1 3144597 D 187272 CDS YP_743597.1 114321914 4269128 3145088..3145564 1 NC_008340.1 PFAM: protein of unknown function DUF1332; KEGG: rfr:Rfer_1818 protein of unknown function DUF1332; hypothetical protein 3145564 4269128 Mlg_2767 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743597.1 3145088 D 187272 CDS YP_743598.1 114321915 4269129 complement(3145569..3146138) 1 NC_008340.1 TIGRFAM: conserved hypothetical protein; KEGG: sme:SMa2229 hypothetical protein; hypothetical protein 3146138 4269129 Mlg_2768 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743598.1 3145569 R 187272 CDS YP_743599.1 114321916 4269130 complement(3146305..3147783) 1 NC_008340.1 PFAM: NAD(P) transhydrogenase, beta subunit; KEGG: eba:ebA4500 pyridine nucleotide transhydrogenase subunit beta; NAD(P) transhydrogenase subunit beta 3147783 4269130 Mlg_2769 Alkalilimnicola ehrlichii MLHE-1 NAD(P) transhydrogenase subunit beta YP_743599.1 3146305 R 187272 CDS YP_743600.1 114321917 4269131 complement(3147784..3148098) 1 NC_008340.1 KEGG: xoo:XOO3630 pyridine nucleotide transhydrogenase subunit alpha; pyridine nucleotide transhydrogenase subunit alpha 3148098 4269131 Mlg_2770 Alkalilimnicola ehrlichii MLHE-1 pyridine nucleotide transhydrogenase subunit alpha YP_743600.1 3147784 R 187272 CDS YP_743601.1 114321918 4269132 complement(3148095..3149228) 1 NC_008340.1 PFAM: alanine dehydrogenase/PNT domain protein; KEGG: eba:ebA4497 pyridine nucleotide transhydrogenase alpha subunit; NAD(P)(+) transhydrogenase 3149228 4269132 Mlg_2771 Alkalilimnicola ehrlichii MLHE-1 NAD(P)(+) transhydrogenase YP_743601.1 3148095 R 187272 CDS YP_743602.1 114321919 4269133 3149669..3150268 1 NC_008340.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: mca:MCA2596 HNH endonuclease domain protein; HNH endonuclease 3150268 4269133 Mlg_2772 Alkalilimnicola ehrlichii MLHE-1 HNH endonuclease YP_743602.1 3149669 D 187272 CDS YP_743603.1 114321920 4269134 complement(3150276..3150944) 1 NC_008340.1 PFAM: Sporulation domain protein; KEGG: pae:PA5052 hypothetical protein; sporulation domain-containing protein 3150944 4269134 Mlg_2773 Alkalilimnicola ehrlichii MLHE-1 sporulation domain-containing protein YP_743603.1 3150276 R 187272 CDS YP_743604.1 114321921 4269135 complement(3150947..3152782) 1 NC_008340.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 3152782 argS 4269135 argS Alkalilimnicola ehrlichii MLHE-1 arginyl-tRNA synthetase YP_743604.1 3150947 R 187272 CDS YP_743605.1 114321922 4269136 3152854..3153921 1 NC_008340.1 PFAM: UMUC domain protein DNA-repair protein; KEGG: sme:SMa2355 DNA polymerase IV; DNA-directed DNA polymerase 3153921 4269136 Mlg_2775 Alkalilimnicola ehrlichii MLHE-1 DNA-directed DNA polymerase YP_743605.1 3152854 D 187272 CDS YP_743606.1 114321923 4269710 complement(3153913..3154209) 1 NC_008340.1 hypothetical protein 3154209 4269710 Mlg_2776 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743606.1 3153913 R 187272 CDS YP_743607.1 114321924 4269711 3154533..3155588 1 NC_008340.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 3155588 ruvB 4269711 ruvB Alkalilimnicola ehrlichii MLHE-1 Holliday junction DNA helicase RuvB YP_743607.1 3154533 D 187272 CDS YP_743608.1 114321925 4269712 3155585..3156211 1 NC_008340.1 PFAM: class II aldolase/adducin family protein; KEGG: rru:Rru_A0359 class II aldolase/adducin-like; L-fuculose-phosphate aldolase 3156211 4269712 Mlg_2778 Alkalilimnicola ehrlichii MLHE-1 L-fuculose-phosphate aldolase YP_743608.1 3155585 D 187272 CDS YP_743609.1 114321926 4269713 3156299..3161149 1 NC_008340.1 PFAM: NAD-glutamate dehydrogenase; KEGG: eba:ebA3619 NAD-glutamate dehydrogenase; glutamate dehydrogenase (NAD) 3161149 4269713 Mlg_2779 Alkalilimnicola ehrlichii MLHE-1 glutamate dehydrogenase (NAD) YP_743609.1 3156299 D 187272 CDS YP_743610.1 114321927 4269714 complement(3161183..3162343) 1 NC_008340.1 PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: tbd:Tbd_1468 hypothetical protein; type I phosphodiesterase/nucleotide pyrophosphatase 3162343 4269714 Mlg_2780 Alkalilimnicola ehrlichii MLHE-1 type I phosphodiesterase/nucleotide pyrophosphatase YP_743610.1 3161183 R 187272 CDS YP_743611.1 114321928 4269715 3162416..3163201 1 NC_008340.1 PFAM: alpha/beta hydrolase fold; KEGG: csa:Csal_1935 alpha/beta hydrolase; alpha/beta hydrolase 3163201 4269715 Mlg_2781 Alkalilimnicola ehrlichii MLHE-1 alpha/beta hydrolase YP_743611.1 3162416 D 187272 CDS YP_743612.1 114321929 4269716 3163274..3164050 1 NC_008340.1 TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: mca:MCA3070 exodeoxyribonuclease III; exodeoxyribonuclease III 3164050 4269716 Mlg_2782 Alkalilimnicola ehrlichii MLHE-1 exodeoxyribonuclease III YP_743612.1 3163274 D 187272 CDS YP_743613.1 114321930 4269717 3164057..3164800 1 NC_008340.1 PFAM: lipopolysaccharide biosynthesis; lipopolysaccharide biosynthesis 3164800 4269717 Mlg_2783 Alkalilimnicola ehrlichii MLHE-1 lipopolysaccharide biosynthesis YP_743613.1 3164057 D 187272 CDS YP_743614.1 114321931 4269718 complement(3164827..3167232) 1 NC_008340.1 PFAM: MscS Mechanosensitive ion channel; KEGG: csa:Csal_3104 MscS mechanosensitive ion channel; mechanosensitive ion channel MscS 3167232 4269718 Mlg_2784 Alkalilimnicola ehrlichii MLHE-1 mechanosensitive ion channel MscS YP_743614.1 3164827 R 187272 CDS YP_743615.1 114321932 4269719 complement(3167352..3168779) 1 NC_008340.1 PFAM: Malonyl-CoA decarboxylase; KEGG: rpd:RPD_0148 malonyl-CoA decarboxylase; malonyl-CoA decarboxylase 3168779 4269719 Mlg_2785 Alkalilimnicola ehrlichii MLHE-1 malonyl-CoA decarboxylase YP_743615.1 3167352 R 187272 CDS YP_743616.1 114321933 4269720 complement(3168776..3170095) 1 NC_008340.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: sme:SMa0151 hypothetical protein; TRAP dicarboxylate transporter subunit DctM 3170095 4269720 Mlg_2786 Alkalilimnicola ehrlichii MLHE-1 TRAP dicarboxylate transporter subunit DctM YP_743616.1 3168776 R 187272 CDS YP_743617.1 114321934 4269721 complement(3170088..3170708) 1 NC_008340.1 PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: sme:SMa0155 hypothetical protein; tripartite ATP-independent periplasmic transporter DctQ 3170708 4269721 Mlg_2787 Alkalilimnicola ehrlichii MLHE-1 tripartite ATP-independent periplasmic transporter DctQ YP_743617.1 3170088 R 187272 CDS YP_743618.1 114321935 4269722 complement(3170819..3171847) 1 NC_008340.1 PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: sme:SMa0157 hypothetical protein; TRAP dicarboxylate transporter subunit DctP 3171847 4269722 Mlg_2788 Alkalilimnicola ehrlichii MLHE-1 TRAP dicarboxylate transporter subunit DctP YP_743618.1 3170819 R 187272 CDS YP_743619.1 114321936 4269723 complement(3172063..3172722) 1 NC_008340.1 PFAM: regulatory protein GntR, HTH; GntR domain protein; Helix-turn-helix, type 11 domain protein; KEGG: xcb:XC_0580 transcriptional regulator MdcY family; GntR family transcriptional regulator 3172722 4269723 Mlg_2789 Alkalilimnicola ehrlichii MLHE-1 GntR family transcriptional regulator YP_743619.1 3172063 R 187272 CDS YP_743620.1 114321937 4269724 3172895..3174433 1 NC_008340.1 catalyzes the formation of malonyl-CoA from malonate and CoA; malonyl-CoA synthase 3174433 4269724 Mlg_2790 Alkalilimnicola ehrlichii MLHE-1 malonyl-CoA synthase YP_743620.1 3172895 D 187272 CDS YP_743621.1 114321938 4269725 3174576..3174836 1 NC_008340.1 KEGG: noc:Noc_0304 hypothetical protein; hypothetical protein 3174836 4269725 Mlg_2791 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743621.1 3174576 D 187272 CDS YP_743622.1 114321939 4269726 3174861..3175949 1 NC_008340.1 TIGRFAM: lipopolysaccharide heptosyltransferase II; PFAM: glycosyl transferase, family 9; KEGG: mfa:Mfla_0768 lipopolysaccharide heptosyltransferase II; lipopolysaccharide heptosyltransferase II 3175949 4269726 Mlg_2792 Alkalilimnicola ehrlichii MLHE-1 lipopolysaccharide heptosyltransferase II YP_743622.1 3174861 D 187272 CDS YP_743623.1 114321940 4269727 3175949..3177082 1 NC_008340.1 PFAM: glycosyl transferase, group 1; KEGG: psb:Psyr_0522 glycosyl transferase, group 1; group 1 glycosyl transferase 3177082 4269727 Mlg_2793 Alkalilimnicola ehrlichii MLHE-1 group 1 glycosyl transferase YP_743623.1 3175949 D 187272 CDS YP_743624.1 114321941 4269137 3177087..3177947 1 NC_008340.1 PFAM: lipopolysaccharide kinase; KEGG: mfa:Mfla_0755 lipopolysaccharide kinase; lipopolysaccharide kinase 3177947 4269137 Mlg_2794 Alkalilimnicola ehrlichii MLHE-1 lipopolysaccharide kinase YP_743624.1 3177087 D 187272 CDS YP_743625.1 114321942 4269138 3177944..3178789 1 NC_008340.1 Mn2+-dependent serine/threonine protein kinase 3178789 4269138 Mlg_2795 Alkalilimnicola ehrlichii MLHE-1 Mn2+-dependent serine/threonine protein kinase YP_743625.1 3177944 D 187272 CDS YP_743626.1 114321943 4269139 3178786..3179586 1 NC_008340.1 KEGG: sma:SAV5424 serine/threonine protein kinase; Mn2+-dependent serine/threonine protein kinase 3179586 4269139 Mlg_2796 Alkalilimnicola ehrlichii MLHE-1 Mn2+-dependent serine/threonine protein kinase YP_743626.1 3178786 D 187272 CDS YP_743627.1 114321944 4269140 3179640..3180632 1 NC_008340.1 PFAM: glycosyl transferase, family 9; KEGG: gsu:GSU2256 ADP-heptose--LPS heptosyltransferase II; glycosyl transferase 3180632 4269140 Mlg_2797 Alkalilimnicola ehrlichii MLHE-1 glycosyl transferase YP_743627.1 3179640 D 187272 CDS YP_743628.1 114321945 4269141 3180641..3181813 1 NC_008340.1 PFAM: glycosyl transferase, group 1; KEGG: ppu:PP4943 glycosyl transferase; group 1 glycosyl transferase 3181813 4269141 Mlg_2798 Alkalilimnicola ehrlichii MLHE-1 group 1 glycosyl transferase YP_743628.1 3180641 D 187272 CDS YP_743629.1 114321946 4269142 complement(3181816..3182901) 1 NC_008340.1 KEGG: pha:PSHAa2321 hypothetical protein; hypothetical protein 3182901 4269142 Mlg_2799 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743629.1 3181816 R 187272 CDS YP_743630.1 114321947 4269143 complement(3182914..3184182) 1 NC_008340.1 PFAM: O-antigen polymerase; KEGG: rpa:RPA3948 hypothetical protein; O-antigen polymerase 3184182 4269143 Mlg_2800 Alkalilimnicola ehrlichii MLHE-1 O-antigen polymerase YP_743630.1 3182914 R 187272 CDS YP_743631.1 114321948 4269144 complement(3184228..3185052) 1 NC_008340.1 PFAM: glycosyl transferase, family 2; KEGG: pfo:Pfl_2033 hypothetical protein; glycosyl transferase 3185052 4269144 Mlg_2801 Alkalilimnicola ehrlichii MLHE-1 glycosyl transferase YP_743631.1 3184228 R 187272 CDS YP_743632.1 114321949 4269145 complement(3185088..3186041) 1 NC_008340.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: mca:MCA1165 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 3186041 4269145 Mlg_2802 Alkalilimnicola ehrlichii MLHE-1 NAD-dependent epimerase/dehydratase YP_743632.1 3185088 R 187272 CDS YP_743633.1 114321950 4269146 3186271..3188040 1 NC_008340.1 KEGG: noc:Noc_2675 lipid A export ATP-binding/permease MsbA; TIGRFAM: lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA 3188040 4269146 Mlg_2803 Alkalilimnicola ehrlichii MLHE-1 lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA YP_743633.1 3186271 D 187272 CDS YP_743634.1 114321951 4269147 complement(3188070..3188912) 1 NC_008340.1 KEGG: bbr:BB1918 hypothetical protein; Mn2+-dependent serine/threonine protein kinase 3188912 4269147 Mlg_2804 Alkalilimnicola ehrlichii MLHE-1 Mn2+-dependent serine/threonine protein kinase YP_743634.1 3188070 R 187272 CDS YP_743635.1 114321952 4269148 3189029..3190003 1 NC_008340.1 TIGRFAM: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase; PFAM: lipid A biosynthesis acyltransferase; KEGG: pae:PA3242 probable lauroyl acyltransferase; lipid A biosynthesis lauroyl acyltransferase 3190003 4269148 Mlg_2805 Alkalilimnicola ehrlichii MLHE-1 lipid A biosynthesis lauroyl acyltransferase YP_743635.1 3189029 D 187272 CDS YP_743636.1 114321953 4269149 3190011..3191099 1 NC_008340.1 PFAM: glycosyl transferase, family 9; KEGG: xoo:XOO1056 saccharide biosynthesis regulatory protein; glycosyl transferase 3191099 4269149 Mlg_2806 Alkalilimnicola ehrlichii MLHE-1 glycosyl transferase YP_743636.1 3190011 D 187272 CDS YP_743637.1 114321954 4269150 complement(3191110..3191880) 1 NC_008340.1 catalyzes the phosphorylation of 3-deoxy-D-manno-octulosonic acid at the 4-OH position; 3-deoxy-D-manno-octulosonic-acid kinase 3191880 4269150 Mlg_2807 Alkalilimnicola ehrlichii MLHE-1 3-deoxy-D-manno-octulosonic-acid kinase YP_743637.1 3191110 R 187272 CDS YP_743638.1 114321955 4269151 complement(3191880..3192800) 1 NC_008340.1 KEGG: aba:Acid345_2070 hypothetical protein; hypothetical protein 3192800 4269151 Mlg_2808 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743638.1 3191880 R 187272 CDS YP_743639.1 114321956 4269152 complement(3192816..3193778) 1 NC_008340.1 TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: pca:Pcar_0024 ADP-L-glycero-D-mannoheptose-6-epimerase; ADP-glyceromanno-heptose 6-epimerase 3193778 4269152 Mlg_2809 Alkalilimnicola ehrlichii MLHE-1 ADP-glyceromanno-heptose 6-epimerase YP_743639.1 3192816 R 187272 CDS YP_743640.1 114321957 4269153 complement(3193860..3195293) 1 NC_008340.1 catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D,D-heptose-1,7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D,D-heptose; bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase 3195293 4269153 Mlg_2810 Alkalilimnicola ehrlichii MLHE-1 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase YP_743640.1 3193860 R 187272 CDS YP_743641.1 114321958 4270738 complement(3195378..3195836) 1 NC_008340.1 PFAM: MaoC domain protein dehydratase; KEGG: rru:Rru_A2964 MaoC-like dehydratase; dehydratase 3195836 4270738 Mlg_2811 Alkalilimnicola ehrlichii MLHE-1 dehydratase YP_743641.1 3195378 R 187272 CDS YP_743642.1 114321959 4270739 complement(3195944..3197476) 1 NC_008340.1 TIGRFAM: cobyric acid synthase CobQ; PFAM: Cobyrinic acid a,c-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: rso:RSc2390 probable cobyric acid synthase; adenosylcobyric acid synthase 3197476 4270739 Mlg_2812 Alkalilimnicola ehrlichii MLHE-1 adenosylcobyric acid synthase YP_743642.1 3195944 R 187272 CDS YP_743643.1 114321960 4270740 complement(3197473..3198768) 1 NC_008340.1 PFAM: Cobyrinic acid a,c-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: rso:RSp0615 probable cobyrinic acid A,C-diamide synthase; hydrogenobyrinic acid a,c-diamide synthase /cobyrinate a,c-diamide synthase 3198768 4270740 Mlg_2813 Alkalilimnicola ehrlichii MLHE-1 hydrogenobyrinic acid a,c-diamide synthase /cobyrinate a,c-diamide synthase YP_743643.1 3197473 R 187272 CDS YP_743644.1 114321961 4270741 complement(3198765..3199394) 1 NC_008340.1 KEGG: pfl:PFL_4431 cob(I)yrinic acid a,c-diamide adenosyltransferase; TIGRFAM: cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; cob(I)yrinic acid a,c-diamide adenosyltransferase 3199394 4270741 Mlg_2814 Alkalilimnicola ehrlichii MLHE-1 cob(I)yrinic acid a,c-diamide adenosyltransferase YP_743644.1 3198765 R 187272 CDS YP_743645.1 114321962 4270742 complement(3199400..3201259) 1 NC_008340.1 PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: pae:PA1271 probable tonB-dependent receptor; TonB-dependent receptor 3201259 4270742 Mlg_2815 Alkalilimnicola ehrlichii MLHE-1 TonB-dependent receptor YP_743645.1 3199400 R 187272 CDS YP_743646.1 114321963 4270743 complement(3201732..3202505) 1 NC_008340.1 catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole; cobalamin synthase 3202505 cobS 4270743 cobS Alkalilimnicola ehrlichii MLHE-1 cobalamin synthase YP_743646.1 3201732 R 187272 CDS YP_743647.1 114321964 4270744 complement(3202510..3203130) 1 NC_008340.1 PFAM: Phosphoglycerate mutase; KEGG: noc:Noc_1928 phosphoglycerate/bisphosphoglycerate mutase; phosphoglycerate mutase 3203130 4270744 Mlg_2817 Alkalilimnicola ehrlichii MLHE-1 phosphoglycerate mutase YP_743647.1 3202510 R 187272 CDS YP_743648.1 114321965 4270745 3203180..3204115 1 NC_008340.1 TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB; KEGG: pfl:PFL_4428 cobalamin biosynthesis protein CobD; adenosylcobinamide-phosphate synthase 3204115 4270745 Mlg_2818 Alkalilimnicola ehrlichii MLHE-1 adenosylcobinamide-phosphate synthase YP_743648.1 3203180 D 187272 CDS YP_743649.1 114321966 4270746 3204088..3205134 1 NC_008340.1 PFAM: aminotransferase, class I and II; KEGG: tbd:Tbd_2715 cobalamin biosynthetic protein CobC; aminotransferase 3205134 4270746 Mlg_2819 Alkalilimnicola ehrlichii MLHE-1 aminotransferase YP_743649.1 3204088 D 187272 CDS YP_743650.1 114321967 4270747 3205374..3206309 1 NC_008340.1 PFAM: periplasmic binding protein; KEGG: eba:ebA3688 probable substrate-binding periplasmic (PBP) ABC transporter protein; periplasmic binding protein 3206309 4270747 Mlg_2820 Alkalilimnicola ehrlichii MLHE-1 periplasmic binding protein YP_743650.1 3205374 D 187272 CDS YP_743651.1 114321968 4270748 3206316..3207284 1 NC_008340.1 PFAM: transport system permease; KEGG: eba:ebA4019 probable transmembrane ABC transporter protein,permease; transport system permease 3207284 4270748 Mlg_2821 Alkalilimnicola ehrlichii MLHE-1 transport system permease YP_743651.1 3206316 D 187272 CDS YP_743652.1 114321969 4270749 3207286..3208056 1 NC_008340.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sde:Sde_3202 ATP-binding ABC transporter protein; ABC transporter-like protein 3208056 4270749 Mlg_2822 Alkalilimnicola ehrlichii MLHE-1 ABC transporter-like protein YP_743652.1 3207286 D 187272 CDS YP_743653.1 114321970 4270750 3208073..3209110 1 NC_008340.1 PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; KEGG: pae:PA1279 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 3209110 4270750 Mlg_2823 Alkalilimnicola ehrlichii MLHE-1 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase YP_743653.1 3208073 D 187272 CDS YP_743654.1 114321971 4270751 complement(3209103..3209612) 1 NC_008340.1 PFAM: cobalbumin biosynthesis enzyme; KEGG: pae:PA1278 cobinamide kinase; adenosylcobinamide kinase 3209612 4270751 Mlg_2824 Alkalilimnicola ehrlichii MLHE-1 adenosylcobinamide kinase YP_743654.1 3209103 R 187272 CDS YP_743655.1 114321972 4270752 complement(3209612..3210424) 1 NC_008340.1 KEGG: hch:HCH_00037 shikimate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding, N-terminal domain protein; shikimate dehydrogenase 3210424 4270752 Mlg_2825 Alkalilimnicola ehrlichii MLHE-1 shikimate dehydrogenase YP_743655.1 3209612 R 187272 CDS YP_743656.1 114321973 4270753 complement(3210510..3211766) 1 NC_008340.1 PFAM: phosphate transporter; KEGG: ilo:IL2207 phosphate permease; phosphate transporter 3211766 4270753 Mlg_2826 Alkalilimnicola ehrlichii MLHE-1 phosphate transporter YP_743656.1 3210510 R 187272 CDS YP_743657.1 114321974 4270754 complement(3211784..3212458) 1 NC_008340.1 PFAM: protein of unknown function DUF47; KEGG: pae:PA5208 hypothetical protein; hypothetical protein 3212458 4270754 Mlg_2827 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743657.1 3211784 R 187272 CDS YP_743658.1 114321975 4270755 complement(3212544..3213542) 1 NC_008340.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 3213542 4270755 Mlg_2828 Alkalilimnicola ehrlichii MLHE-1 delta-aminolevulinic acid dehydratase YP_743658.1 3212544 R 187272 CDS YP_743659.1 114321976 4270873 complement(3213539..3213745) 1 NC_008340.1 KEGG: bbr:BB3303 hypothetical protein; hypothetical protein 3213745 4270873 Mlg_2829 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743659.1 3213539 R 187272 CDS YP_743660.1 114321977 4270874 3213910..3214896 1 NC_008340.1 KEGG: mag:amb1288 hypothetical protein; hypothetical protein 3214896 4270874 Mlg_2830 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743660.1 3213910 D 187272 CDS YP_743661.1 114321978 4270875 3214889..3215977 1 NC_008340.1 PFAM: OmpA/MotB domain protein; KEGG: rru:Rru_A1073 OmpA/MotB; OmpA/MotB domain-containing protein 3215977 4270875 Mlg_2831 Alkalilimnicola ehrlichii MLHE-1 OmpA/MotB domain-containing protein YP_743661.1 3214889 D 187272 CDS YP_743662.1 114321979 4270876 3216026..3216541 1 NC_008340.1 KEGG: gme:Gmet_0792 hypothetical protein; hypothetical protein 3216541 4270876 Mlg_2832 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743662.1 3216026 D 187272 CDS YP_743663.1 114321980 4270877 complement(3216597..3217475) 1 NC_008340.1 PFAM: phosphoribulokinase/uridine kinase; KEGG: syd:Syncc9605_1864 phosphoribulokinase; phosphoribulokinase 3217475 4270877 Mlg_2833 Alkalilimnicola ehrlichii MLHE-1 phosphoribulokinase YP_743663.1 3216597 R 187272 CDS YP_743664.1 114321981 4270878 complement(3217537..3218229) 1 NC_008340.1 PFAM: ribulose-phosphate 3-epimerase; KEGG: pst:PSPTO0566 ribulose-phosphate 3-epimerase; ribulose-5-phosphate 3-epimerase 3218229 4270878 Mlg_2834 Alkalilimnicola ehrlichii MLHE-1 ribulose-5-phosphate 3-epimerase YP_743664.1 3217537 R 187272 CDS YP_743665.1 114321982 4270879 complement(3218505..3219434) 1 NC_008340.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: noc:Noc_0334 transcriptional regulatory protein, LysR family; LysR family transcriptional regulator 3219434 4270879 Mlg_2835 Alkalilimnicola ehrlichii MLHE-1 LysR family transcriptional regulator YP_743665.1 3218505 R 187272 CDS YP_743666.1 114321983 4270880 3219578..3220999 1 NC_008340.1 type III RuBisCO; involved in carbon fixation; ribulose bisophosphate carboxylase 3220999 rbcL 4270880 rbcL Alkalilimnicola ehrlichii MLHE-1 ribulose bisophosphate carboxylase YP_743666.1 3219578 D 187272 CDS YP_743667.1 114321984 4270881 3221055..3221411 1 NC_008340.1 PFAM: ribulose bisphosphate carboxylase, small chain; KEGG: mca:MCA2744 ribulose bisphosphate carboxylase, small subunit; ribulose 1,5-bisphosphate carboxylase small subunit 3221411 4270881 Mlg_2837 Alkalilimnicola ehrlichii MLHE-1 ribulose 1,5-bisphosphate carboxylase small subunit YP_743667.1 3221055 D 187272 CDS YP_743668.1 114321985 4270882 3221578..3222384 1 NC_008340.1 PFAM: ATPase associated with various cellular activities, AAA_5; CbbQ/NirQ/NorQ C-terminal domain protein; KEGG: mca:MCA2746 nitric-oxide reductase NorQ protein; CbbQ/NirQ/NorQ C-terminal domain-containing protein 3222384 4270882 Mlg_2838 Alkalilimnicola ehrlichii MLHE-1 CbbQ/NirQ/NorQ C-terminal domain-containing protein YP_743668.1 3221578 D 187272 CDS YP_743669.1 114321986 4270883 3222817..3225198 1 NC_008340.1 PFAM: von Willebrand factor, type A; KEGG: mca:MCA2754 CbbO protein; von Willebrand factor A 3225198 4270883 Mlg_2839 Alkalilimnicola ehrlichii MLHE-1 von Willebrand factor A YP_743669.1 3222817 D 187272 CDS YP_743670.1 114321987 4270884 3225417..3226427 1 NC_008340.1 KEGG: bte:BTH_I1196 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase 3226427 4270884 Mlg_2840 Alkalilimnicola ehrlichii MLHE-1 glyceraldehyde-3-phosphate dehydrogenase YP_743670.1 3225417 D 187272 CDS YP_743671.1 114321988 4270885 3226909..3228906 1 NC_008340.1 KEGG: noc:Noc_2808 transketolase; TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase, central region; transketolase 3228906 4270885 Mlg_2841 Alkalilimnicola ehrlichii MLHE-1 transketolase YP_743671.1 3226909 D 187272 CDS YP_743672.1 114321989 4270886 3229019..3230197 1 NC_008340.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 3230197 pgk 4270886 pgk Alkalilimnicola ehrlichii MLHE-1 phosphoglycerate kinase YP_743672.1 3229019 D 187272 CDS YP_743673.1 114321990 4270887 3230261..3231715 1 NC_008340.1 PFAM: pyruvate kinase; KEGG: noc:Noc_2805 pyruvate kinase; pyruvate kinase 3231715 4270887 Mlg_2843 Alkalilimnicola ehrlichii MLHE-1 pyruvate kinase YP_743673.1 3230261 D 187272 CDS YP_743674.1 114321991 4270888 3231817..3232881 1 NC_008340.1 class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis; fructose-1,6-bisphosphate aldolase 3232881 4270888 Mlg_2844 Alkalilimnicola ehrlichii MLHE-1 fructose-1,6-bisphosphate aldolase YP_743674.1 3231817 D 187272 CDS YP_743675.1 114321992 4270889 complement(3233036..3234445) 1 NC_008340.1 PFAM: phosphoglucomutase/phosphomannomutase C terminal; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: noc:Noc_2994 phosphomannomutase; phosphomannomutase 3234445 4270889 Mlg_2845 Alkalilimnicola ehrlichii MLHE-1 phosphomannomutase YP_743675.1 3233036 R 187272 CDS YP_743676.1 114321993 4268584 complement(3234704..3235072) 1 NC_008340.1 KEGG: ypm:YP0048 deoxyuridine 5'-triphosphate nucleotidohydrolase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase; deoxyuridine 5'-triphosphate nucleotidohydrolase 3235072 4268584 Mlg_2846 Alkalilimnicola ehrlichii MLHE-1 deoxyuridine 5'-triphosphate nucleotidohydrolase YP_743676.1 3234704 R 187272 CDS YP_743677.1 114321994 4268585 complement(3235113..3236366) 1 NC_008340.1 TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein; KEGG: noc:Noc_2992 DNA/pantothenate metabolism flavoprotein; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 3236366 4268585 Mlg_2847 Alkalilimnicola ehrlichii MLHE-1 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase YP_743677.1 3235113 R 187272 CDS YP_743678.1 114321995 4268586 complement(3236460..3237845) 1 NC_008340.1 PFAM: sodium:neurotransmitter symporter; KEGG: mca:MCA2621 sodium-dependent transporter family protein; sodium:neurotransmitter symporter 3237845 4268586 Mlg_2848 Alkalilimnicola ehrlichii MLHE-1 sodium:neurotransmitter symporter YP_743678.1 3236460 R 187272 CDS YP_743679.1 114321996 4268587 complement(3237904..3238734) 1 NC_008340.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: pae:PA5488 hypothetical protein; hypothetical protein 3238734 4268587 Mlg_2849 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743679.1 3237904 R 187272 CDS YP_743680.1 114321997 4268588 complement(3238742..3239377) 1 NC_008340.1 PFAM: DSBA oxidoreductase; KEGG: mca:MCA2602 thiol:disulfide interchange protein DsbA; DSBA oxidoreductase 3239377 4268588 Mlg_2850 Alkalilimnicola ehrlichii MLHE-1 DSBA oxidoreductase YP_743680.1 3238742 R 187272 CDS YP_743681.1 114321998 4268589 complement(3239381..3240568) 1 NC_008340.1 PFAM: cytochrome c assembly protein; KEGG: bte:BTH_I3034 cytochrome c assembly family protein; cytochrome c assembly protein 3240568 4268589 Mlg_2851 Alkalilimnicola ehrlichii MLHE-1 cytochrome c assembly protein YP_743681.1 3239381 R 187272 CDS YP_743682.1 114321999 4268590 complement(3240568..3242673) 1 NC_008340.1 PFAM: ResB family protein; KEGG: mfa:Mfla_0233 ResB-like protein; ResB family protein 3242673 4268590 Mlg_2852 Alkalilimnicola ehrlichii MLHE-1 ResB family protein YP_743682.1 3240568 R 187272 CDS YP_743683.1 114322000 4268591 complement(3242793..3243410) 1 NC_008340.1 PFAM: cytochrome c, class I; KEGG: noc:Noc_0552 cytochrome c, class I; cytochrome c, class I 3243410 4268591 Mlg_2853 Alkalilimnicola ehrlichii MLHE-1 cytochrome c, class I YP_743683.1 3242793 R 187272 CDS YP_743684.1 114322001 4268592 complement(3243623..3244630) 1 NC_008340.1 PFAM: Di-haem cytochrome c peroxidase; KEGG: sth:STH2047 cytochrome C peroxidase; cytochrome-c peroxidase 3244630 4268592 Mlg_2854 Alkalilimnicola ehrlichii MLHE-1 cytochrome-c peroxidase YP_743684.1 3243623 R 187272 CDS YP_743685.1 114322002 4268593 3244800..3245747 1 NC_008340.1 in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ; sulfite oxidase subunit YedY 3245747 4268593 Mlg_2855 Alkalilimnicola ehrlichii MLHE-1 sulfite oxidase subunit YedY YP_743685.1 3244800 D 187272 CDS YP_743686.1 114322003 4268594 3245749..3246348 1 NC_008340.1 PFAM: Ferric reductase domain protein transmembrane component, N-terminal domain; KEGG: rru:Rru_A0594 hypothetical protein; ferric reductase 3246348 4268594 Mlg_2856 Alkalilimnicola ehrlichii MLHE-1 ferric reductase YP_743686.1 3245749 D 187272 CDS YP_743687.1 114322004 4268595 3246395..3247015 1 NC_008340.1 TIGRFAM: GTP-binding; PFAM: GTP-binding protein, HSR1-related; KEGG: csa:Csal_3117 GTP-binding protein, HSR1-related; cell division checkpoint GTPase YihA 3247015 4268595 Mlg_2857 Alkalilimnicola ehrlichii MLHE-1 cell division checkpoint GTPase YihA YP_743687.1 3246395 D 187272 CDS YP_743688.1 114322005 4268596 complement(3247036..3247692) 1 NC_008340.1 KEGG: hch:HCH_04240 uncharacterized protein with a C-terminal OMP (outer membrane protein) domain; outer membrane protein domain-containing protein 3247692 4268596 Mlg_2858 Alkalilimnicola ehrlichii MLHE-1 outer membrane protein domain-containing protein YP_743688.1 3247036 R 187272 CDS YP_743689.1 114322006 4268597 complement(3247991..3248479) 1 NC_008340.1 PFAM: Disulphide bond formation protein DsbB; KEGG: csa:Csal_2653 disulphide bond formation protein DsbB; disulfide bond formation protein DsbB 3248479 4268597 Mlg_2859 Alkalilimnicola ehrlichii MLHE-1 disulfide bond formation protein DsbB YP_743689.1 3247991 R 187272 CDS YP_743690.1 114322007 4268598 complement(3248549..3251287) 1 NC_008340.1 KEGG: mca:MCA2573 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; 3'-5' exonuclease; SMART: Helix-hairpin-helix domain protein, class 2; DNA polymerase I 3251287 4268598 Mlg_2860 Alkalilimnicola ehrlichii MLHE-1 DNA polymerase I YP_743690.1 3248549 R 187272 CDS YP_743691.1 114322008 4268599 3251540..3252265 1 NC_008340.1 PFAM: conserved hypothetical protein 730; KEGG: noc:Noc_0555 conserved hypothetical protein 730; hypothetical protein 3252265 4268599 Mlg_2861 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743691.1 3251540 D 187272 CDS YP_743692.1 114322009 4268600 3252348..3252725 1 NC_008340.1 KEGG: cvi:CV0777 hypothetical protein; hypothetical protein 3252725 4268600 Mlg_2862 Alkalilimnicola ehrlichii MLHE-1 hypothetical protein YP_743692.1 3252348 D 187272 CDS YP_743693.1 114322010 4268601 complement(3252741..3254918) 1 NC_008340.1 PFAM: UvrD/REP helicase; KEGG: sgl:SG2342 DNA helicase II; ATP-dependent DNA helicase UvrD 3254918 4268601 Mlg_2863 Alkalilimnicola ehrlichii MLHE-1 ATP-dependent DNA helicase UvrD YP_743693.1 3252741 R 187272 CDS YP_743694.1 114322011 4269413 complement(3255200..3256141) 1 NC_008340.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: xac:XAC0905 oxidative stress transcriptional regulator; LysR family transcriptional regulator 3256141 4269413 Mlg_2864 Alkalilimnicola ehrlichii MLHE-1 LysR family transcriptional regulator YP_743694.1 3255200 R 187272 CDS YP_743695.1 114322012 4269414 complement(3256144..3257976) 1 NC_008340.1 TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase, class-II; sugar isomerase (SIS); KEGG: mca:MCA0015 glucosamine--fructose-6-phosphate aminotransferase, isomerizing; glutamine--fructose-6-phosphate transaminase 3257976 4269414 Mlg_2865 Alkalilimnicola ehrlichii MLHE-1 glutamine--fructose-6-phosphate transaminase YP_743695.1 3256144 R 187272 CDS YP_743696.1 114322013 4269415 complement(3258091..3258921) 1 NC_008340.1 PFAM: UspA domain protein; KEGG: tko:TK2034 universal stress protein; UspA domain-containing protein 3258921 4269415 Mlg_2866 Alkalilimnicola ehrlichii MLHE-1 UspA domain-containing protein YP_743696.1 3258091 R 187272 CDS YP_743697.1 114322014 4269416 complement(3258997..3260397) 1 NC_008340.1 TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; transferase hexapeptide repeat containing protein; Nucleotidyl transferase; KEGG: pae:PA5552 glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase; glucosamine-1-phosphate N-acetyltransferase/UDP-N-acetylglucosamine pyrophosphorylase 3260397 4269416 Mlg_2867 Alkalilimnicola ehrlichii MLHE-1 glucosamine-1-phosphate N-acetyltransferase/UDP-N-acetylglucosamine pyrophosphorylase YP_743697.1 3258997 R 187272 CDS YP_743698.1 114322015 4269417 complement(3260468..3260890) 1 NC_008340.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; ATP synthase F0F1 subunit epsilon 3260890 atpC 4269417 atpC Alkalilimnicola ehrlichii MLHE-1 ATP synthase F0F1 subunit epsilon YP_743698.1 3260468 R 187272 CDS YP_743699.1 114322016 4269418 complement(3260918..3262294) 1 NC_008340.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; ATP synthase F0F1 subunit beta 3262294 4269418 Mlg_2869 Alkalilimnicola ehrlichii MLHE-1 ATP synthase F0F1 subunit beta YP_743699.1 3260918 R 187272 CDS YP_743700.1 114322017 4269419 complement(3262385..3263248) 1 NC_008340.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; ATP synthase F0F1 subunit gamma 3263248 4269419 Mlg_2870 Alkalilimnicola ehrlichii MLHE-1 ATP synthase F0F1 subunit gamma YP_743700.1 3262385 R 187272 CDS YP_743701.1 114322018 4269420 complement(3263279..3264820) 1 NC_008340.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; ATP synthase F0F1 subunit alpha 3264820 4269420 Mlg_2871 Alkalilimnicola ehrlichii MLHE-1 ATP synthase F0F1 subunit alpha YP_743701.1 3263279 R 187272 CDS YP_743702.1 114322019 4269421 complement(3264833..3265372) 1 NC_008340.1 Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; ATP synthase F0F1 subunit delta 3265372 4269421 Mlg_2872 Alkalilimnicola ehrlichii MLHE-1 ATP synthase F0F1 subunit delta YP_743702.1 3264833 R 187272 CDS YP_743703.1 114322020 4269422 complement(3265385..3265825) 1 NC_008340.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; ATP synthase F0F1 subunit B 3265825 4269422 Mlg_2873 Alkalilimnicola ehrlichii MLHE-1 ATP synthase F0F1 subunit B YP_743703.1 3265385 R 187272 CDS YP_743704.1 114322021 4269423 complement(3265907..3266194) 1 NC_008340.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; ATP synthase F0F1 subunit C 3266194 4269423 Mlg_2874 Alkalilimnicola ehrlichii MLHE-1 ATP synthase F0F1 subunit C YP_743704.1 3265907 R 187272 CDS YP_743705.1 114322022 4269424 complement(3266302..3267069) 1 NC_008340.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; ATP synthase F0F1 subunit A 3267069 4269424 Mlg_2875 Alkalilimnicola ehrlichii MLHE-1 ATP synthase F0F1 subunit A YP_743705.1 3266302 R 187272 CDS YP_743706.1 114322023 4269425 complement(3267066..3267506) 1 NC_008340.1 PFAM: ATP synthase I chain; KEGG: sdn:Sden_3759 ATP synthase I chain; ATP synthase I chain 3267506 4269425 Mlg_2876 Alkalilimnicola ehrlichii MLHE-1 ATP synthase I chain YP_743706.1 3267066 R 187272 CDS YP_743707.1 114322024 4269426 complement(3267659..3268522) 1 NC_008340.1 TIGRFAM: parB-like partition proteins; PFAM: ParB domain protein nuclease; KEGG: noc:Noc_3082 ParB-like partition protein; parB-like partition proteins 3268522 4269426 Mlg_2877 Alkalilimnicola ehrlichii MLHE-1 parB-like partition proteins YP_743707.1 3267659 R 187272 CDS YP_743708.1 114322025 4269427 complement(3268528..3269361) 1 NC_008340.1 PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: pfl:PFL_6224 chromosome partitioning protein ParA; cobyrinic acid a,c-diamide synthase 3269361 4269427 Mlg_2878 Alkalilimnicola ehrlichii MLHE-1 cobyrinic acid a,c-diamide synthase YP_743708.1 3268528 R 187272 CDS YP_743709.1 114322026 4269428 complement(3269358..3270020) 1 NC_008340.1 TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein; methyltransferase small; Methyltransferase type 12; KEGG: noc:Noc_3084 glucose inhibited division protein; methyltransferase GidB 3270020 4269428 Mlg_2879 Alkalilimnicola ehrlichii MLHE-1 methyltransferase GidB YP_743709.1 3269358 R 187272 CDS YP_743710.1 114322027 4269429 complement(3270021..3271910) 1 NC_008340.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 3271910 gidA 4269429 gidA Alkalilimnicola ehrlichii MLHE-1 tRNA uridine 5-carboxymethylaminomethyl modification protein GidA YP_743710.1 3270021 R 187272 CDS YP_743711.1 114322028 4269763 complement(3272218..3273552) 1 NC_008340.1 TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein; GTP-binding; PFAM: GTP-binding protein, HSR1-related; KEGG: vpa:VP0002 thiophene and furan oxidation protein ThdF; tRNA modification GTPase TrmE 3273552 4269763 Mlg_2881 Alkalilimnicola ehrlichii MLHE-1 tRNA modification GTPase TrmE YP_743711.1 3272218 R 187272 CDS YP_743712.1 114322029 4269764 complement(3273557..3275245) 1 NC_008340.1 PFAM: 60 kDa inner membrane insertion protein; KEGG: mfa:Mfla_2758 60 kDa inner membrane insertion protein; protein translocase subunit yidC 3275245 4269764 Mlg_2882 Alkalilimnicola ehrlichii MLHE-1 protein translocase subunit yidC YP_743712.1 3273557 R 187272 CDS YP_743713.1 114322030 4269765 complement(3275317..3275688) 1 NC_008340.1 TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein; KEGG: mca:MCA3035 ribonuclease P protein component; ribonuclease P protein component 3275688 4269765 Mlg_2883 Alkalilimnicola ehrlichii MLHE-1 ribonuclease P protein component YP_743713.1 3275317 R 187272 CDS YP_743714.1 114322031 4269766 complement(3275693..3275827) 1 NC_008340.1 in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 3275827 rpmH 4269766 rpmH Alkalilimnicola ehrlichii MLHE-1 50S ribosomal protein L34 YP_743714.1 3275693 R 187272 CDS