-- dump date   	20140618_194248
-- class       	Genbank::Feature
-- table       	feature
-- table       	main
-- field 1	id
-- field 2	type
-- field 3	name
-- field 4	contig
-- field 5	start_pos
-- field 6	end_pos
-- field 7	strand
-- field 8	description
-- field 9	chrom_position
-- field 10	organism
-- field 11	GeneID
-- header
-- id	type	name	contig	start_pos	end_pos	strand	description	chrom_position	organism	GeneID
293826000001	SEQ_END	SEQ_END	NC_009633.1	4929566	4929566	DR	NC_009633.1; contig end	4929566..4929566	Alkaliphilus metalliredigens QYMF	<NULL_VALUE>
YP_001317903.1	CDS	dnaA	NC_009633.1	50	1396	D	binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein	50..1396	Alkaliphilus metalliredigens QYMF	5314968
YP_001317904.1	CDS	Amet_0002	NC_009633.1	1629	2735	D	binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta	1629..2735	Alkaliphilus metalliredigens QYMF	5310028
YP_001317905.1	CDS	Amet_0003	NC_009633.1	2819	3028	D	PFAM: RNA-binding S4 domain protein; KEGG: cth:Cthe_2373 RNA-binding S4; RNA-binding S4 domain-containing protein	2819..3028	Alkaliphilus metalliredigens QYMF	5310029
YP_001317906.1	CDS	recF	NC_009633.1	3115	4221	D	Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F	3115..4221	Alkaliphilus metalliredigens QYMF	5310030
YP_001317907.1	CDS	Amet_0005	NC_009633.1	4310	4597	D	KEGG: cth:Cthe_2375 hypothetical protein; hypothetical protein	4310..4597	Alkaliphilus metalliredigens QYMF	5310031
YP_001317908.1	CDS	Amet_0006	NC_009633.1	4652	6559	D	KEGG: gka:GK0005 DNA gyrase subunit B; TIGRFAM: DNA gyrase, B subunit; PFAM: DNA gyrase, subunit B domain protein; ATP-binding region, ATPase domain protein; TOPRIM domain protein; DNA topoisomerase, type IIA, subunit B, region 2 domain protein; SMART: DNA topoisomerase II; DNA gyrase subunit B	4652..6559	Alkaliphilus metalliredigens QYMF	5310032
YP_001317909.1	CDS	Amet_0007	NC_009633.1	6576	9068	D	TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal repeat, beta-propeller; KEGG: chy:CHY_2704 DNA gyrase, A subunit; DNA gyrase subunit A	6576..9068	Alkaliphilus metalliredigens QYMF	5310033
YP_001317910.1	CDS	Amet_0008	NC_009633.1	9333	9650	D	TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: cth:Cthe_2898 anti-sigma-factor antagonist; anti-sigma-factor antagonist	9333..9650	Alkaliphilus metalliredigens QYMF	5310034
YP_001317911.1	CDS	Amet_0009	NC_009633.1	9691	10116	D	KEGG: bcl:ABC0815 anti-sigma B factor; putative anti-sigma regulatory factor	9691..10116	Alkaliphilus metalliredigens QYMF	5310035
YP_001317912.1	CDS	Amet_0010	NC_009633.1	10116	10916	D	TIGRFAM: phage transcriptional regulator, RinA family; RNA polymerase sigma-70; RNA polymerase sigma-B/F/G type; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: cth:Cthe_2900 RNA polymerase, sigma 28 subunit; RinA family phage transcriptional regulator	10116..10916	Alkaliphilus metalliredigens QYMF	5310036
YP_001317913.1	CDS	Amet_0011	NC_009633.1	16755	16907	D	hypothetical protein	16755..16907	Alkaliphilus metalliredigens QYMF	5310040
YP_001317914.1	CDS	Amet_0012	NC_009633.1	17117	17344	D	hypothetical protein	17117..17344	Alkaliphilus metalliredigens QYMF	5310041
YP_001317915.1	CDS	Amet_0013	NC_009633.1	17548	18012	D	PFAM: protein of unknown function DUF988; KEGG: ctc:CTC02339 transporter; hypothetical protein	17548..18012	Alkaliphilus metalliredigens QYMF	5310042
YP_001317916.1	CDS	Amet_0014	NC_009633.1	18180	19043	D	KEGG: tma:TM1086 hypothetical protein; hypothetical protein	18180..19043	Alkaliphilus metalliredigens QYMF	5310043
YP_001317917.1	CDS	Amet_0015	NC_009633.1	19183	20526	D	PFAM: glycine cleavage system P-protein; KEGG: tte:TTE0294 Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain; glycine dehydrogenase	19183..20526	Alkaliphilus metalliredigens QYMF	5310044
YP_001317918.1	CDS	Amet_0016	NC_009633.1	20526	21971	D	acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein; glycine dehydrogenase subunit 2	20526..21971	Alkaliphilus metalliredigens QYMF	5310045
YP_001317919.1	CDS	Amet_0017	NC_009633.1	27844	28755	D	TIGRFAM: quinolinate synthetase complex, A subunit; PFAM: Quinolinate synthetase A; KEGG: cth:Cthe_2356 quinolinate synthetase complex, A subunit; quinolinate synthetase complex subunit A	27844..28755	Alkaliphilus metalliredigens QYMF	5310049
YP_001317920.1	CDS	Amet_0018	NC_009633.1	28770	30332	D	TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: cth:Cthe_2355 L-aspartate oxidase; L-aspartate oxidase	28770..30332	Alkaliphilus metalliredigens QYMF	5310050
YP_001317921.1	CDS	Amet_0019	NC_009633.1	30355	31194	D	TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; KEGG: cth:Cthe_2354 nicotinate-nucleotide pyrophosphorylase; nicotinate-nucleotide pyrophosphorylase	30355..31194	Alkaliphilus metalliredigens QYMF	5310051
YP_001317922.1	CDS	Amet_0020	NC_009633.1	31205	31723	D	PFAM: 3H domain protein; Helix-turn-helix, type 11 domain protein; KEGG: tte:TTE0520 hypothetical protein; 3H domain-containing protein	31205..31723	Alkaliphilus metalliredigens QYMF	5310052
YP_001317923.1	CDS	Amet_0021	NC_009633.1	31739	32788	D	PFAM: phosphotransferase system, EIIC; KEGG: bha:BH3254 hypothetical protein; phosphotransferase system, EIIC	31739..32788	Alkaliphilus metalliredigens QYMF	5310053
YP_001317924.1	CDS	Amet_0022	NC_009633.1	32891	35689	D	PFAM: protein of unknown function UPF0182; KEGG: swo:Swol_1161 protein of unknown function UPF0182; hypothetical protein	32891..35689	Alkaliphilus metalliredigens QYMF	5310054
YP_001317925.1	CDS	Amet_0023	NC_009633.1	35753	35959	R	hypothetical protein	complement(35753..35959)	Alkaliphilus metalliredigens QYMF	5310055
YP_001317926.1	CDS	Amet_0024	NC_009633.1	36527	37807	D	catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase	36527..37807	Alkaliphilus metalliredigens QYMF	5310056
YP_001317927.1	CDS	Amet_0025	NC_009633.1	38018	38752	D	hypothetical protein	38018..38752	Alkaliphilus metalliredigens QYMF	5310057
YP_001317928.1	CDS	Amet_0026	NC_009633.1	38949	39404	D	PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: gka:GK0016 hypothetical protein; CMP/dCMP deaminase	38949..39404	Alkaliphilus metalliredigens QYMF	5310059
YP_001317929.1	CDS	Amet_0027	NC_009633.1	40091	40726	D	PFAM: SirA family protein; KEGG: swo:Swol_1887 SirA-like protein; SirA family protein	40091..40726	Alkaliphilus metalliredigens QYMF	5310062
YP_001317930.1	CDS	Amet_0028	NC_009633.1	40741	41007	D	KEGG: tte:TTE1677 hypothetical protein; hypothetical protein	40741..41007	Alkaliphilus metalliredigens QYMF	5310063
YP_001317931.1	CDS	Amet_0029	NC_009633.1	41021	41905	D	PFAM: MscS Mechanosensitive ion channel; KEGG: tte:TTE2783 Small-conductance mechanosensitive channel; mechanosensitive ion channel protein MscS	41021..41905	Alkaliphilus metalliredigens QYMF	5310064
YP_001317932.1	CDS	Amet_0030	NC_009633.1	42014	42208	D	PFAM: protein of unknown function DUF951; KEGG: cth:Cthe_2512 protein of unknown function DUF951; hypothetical protein	42014..42208	Alkaliphilus metalliredigens QYMF	5310065
YP_001317933.1	CDS	Amet_0031	NC_009633.1	42372	43565	D	PFAM: aminotransferase, class I and II; KEGG: mmp:MMP0096 aminotransferase (subgroup I); GntR family transcriptional regulator	42372..43565	Alkaliphilus metalliredigens QYMF	5310066
YP_001317934.1	CDS	rpsF	NC_009633.1	43948	44232	D	binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6	43948..44232	Alkaliphilus metalliredigens QYMF	5310067
YP_001317935.1	CDS	Amet_0033	NC_009633.1	44256	44696	D	TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; nucleic acid binding, OB-fold, tRNA/helicase-type; KEGG: ctc:CTC00108 single-strand binding protein; single-strand binding protein	44256..44696	Alkaliphilus metalliredigens QYMF	5310068
YP_001317936.1	CDS	rpsR	NC_009633.1	44715	44945	D	binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18	44715..44945	Alkaliphilus metalliredigens QYMF	5310069
YP_001317937.1	CDS	Amet_0035	NC_009633.1	45115	46218	D	PFAM: YibE/F family protein; KEGG: cno:NT01CX_0212 conserved membrane protein, putative; hypothetical protein	45115..46218	Alkaliphilus metalliredigens QYMF	5310070
YP_001317938.1	CDS	Amet_0036	NC_009633.1	46365	46781	D	KEGG: cpf:CPF_0517 hypothetical protein; hypothetical protein	46365..46781	Alkaliphilus metalliredigens QYMF	5310071
YP_001317939.1	CDS	Amet_0037	NC_009633.1	47045	47647	D	TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: ribosomal protein L25; KEGG: swo:Swol_0069 ribosomal protein L25; ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5	47045..47647	Alkaliphilus metalliredigens QYMF	5310072
YP_001317940.1	CDS	Amet_0038	NC_009633.1	47781	48395	D	TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: ribosomal protein L25; KEGG: cpe:CPE1874 probable general stress protein; ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5	47781..48395	Alkaliphilus metalliredigens QYMF	5310073
YP_001317941.1	CDS	Amet_0039	NC_009633.1	59604	60812	R	TIGRFAM: acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: rxy:Rxyl_2475 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase	complement(59604..60812)	Alkaliphilus metalliredigens QYMF	5310082
YP_001317942.1	CDS	Amet_0040	NC_009633.1	60905	62329	R	PFAM: C4-dicarboxylate anaerobic carrier; AbgT putative transporter; KEGG: bld:BLi00322 YcgA; C4-dicarboxylate anaerobic carrier	complement(60905..62329)	Alkaliphilus metalliredigens QYMF	5310083
YP_001317943.1	CDS	Amet_0041	NC_009633.1	62690	64081	D	PFAM: amidohydrolase; Amidohydrolase 3; KEGG: pab:PAB0090 D-aminoacylase (aspartate, glutamate etc); amidohydrolase 3	62690..64081	Alkaliphilus metalliredigens QYMF	5310084
YP_001317944.1	CDS	Amet_0042	NC_009633.1	64185	65354	D	TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bld:BLi00323 hypothetical protein; amidohydrolase	64185..65354	Alkaliphilus metalliredigens QYMF	5310085
YP_001317945.1	CDS	Amet_0043	NC_009633.1	65576	67054	D	PFAM: chemotaxis sensory transducer; KEGG: tte:TTE1777 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer	65576..67054	Alkaliphilus metalliredigens QYMF	5310086
YP_001317946.1	CDS	Amet_0044	NC_009633.1	67152	67490	D	PFAM: protein of unknown function DUF156; KEGG: dsy:DSY4511 hypothetical protein; hypothetical protein	67152..67490	Alkaliphilus metalliredigens QYMF	5310087
YP_001317947.1	CDS	Amet_0045	NC_009633.1	67581	67796	D	PFAM: Heavy metal transport/detoxification protein; KEGG: dsy:DSY4509 hypothetical protein; heavy metal transport/detoxification protein	67581..67796	Alkaliphilus metalliredigens QYMF	5310088
YP_001317948.1	CDS	Amet_0046	NC_009633.1	67921	68937	R	PFAM: aminodeoxychorismate lyase; KEGG: tte:TTE1255 predicted periplasmic solute-binding protein; aminodeoxychorismate lyase	complement(67921..68937)	Alkaliphilus metalliredigens QYMF	5310089
YP_001317949.1	CDS	Amet_0047	NC_009633.1	69263	70279	D	PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: sus:Acid_0749 UBA/ThiF-type NAD/FAD binding protein; UBA/THIF-type NAD/FAD binding protein	69263..70279	Alkaliphilus metalliredigens QYMF	5310090
YP_001317950.1	CDS	Amet_0048	NC_009633.1	70432	71064	D	PFAM: SNARE associated Golgi protein; KEGG: cac:CAC0677 hypothetical protein; hypothetical protein	70432..71064	Alkaliphilus metalliredigens QYMF	5310091
YP_001317951.1	CDS	Amet_0049	NC_009633.1	71109	71585	R	KEGG: mta:Moth_2197 putative transcriptional regulator, AsnC family; AsnC family transcriptional regulator	complement(71109..71585)	Alkaliphilus metalliredigens QYMF	5310092
YP_001317952.1	CDS	Amet_0050	NC_009633.1	71582	72040	R	SMART: regulatory protein, AsnC/Lrp family; KEGG: mta:Moth_2198 putative transcriptional regulator, AsnC family; AsnC family transcriptional regulator	complement(71582..72040)	Alkaliphilus metalliredigens QYMF	5310093
YP_001317953.1	CDS	Amet_0051	NC_009633.1	72033	73040	R	PFAM: Radical SAM domain protein; KEGG: chy:CHY_1211 radical SAM domain protein; radical SAM domain-containing protein	complement(72033..73040)	Alkaliphilus metalliredigens QYMF	5310094
YP_001317954.1	CDS	Amet_0052	NC_009633.1	73037	74245	R	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: dsy:DSY2223 hypothetical protein; radical SAM domain-containing protein	complement(73037..74245)	Alkaliphilus metalliredigens QYMF	5310095
YP_001317955.1	CDS	Amet_0053	NC_009633.1	74566	75975	D	PFAM: conserved hypothetical protein 698; KEGG: ter:Tery_0334 conserved hypothetical protein 698; hypothetical protein	74566..75975	Alkaliphilus metalliredigens QYMF	5310096
YP_001317956.1	CDS	Amet_0054	NC_009633.1	76126	76353	D	hypothetical protein	76126..76353	Alkaliphilus metalliredigens QYMF	5310097
YP_001317957.1	CDS	Amet_0055	NC_009633.1	76435	76839	D	PFAM: SirA family protein; KEGG: gme:Gmet_1571 hypothetical protein; SirA family protein	76435..76839	Alkaliphilus metalliredigens QYMF	5310098
YP_001317958.1	CDS	Amet_0056	NC_009633.1	76860	77771	D	TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein, beta subunit; KEGG: mta:Moth_1706 cysteine synthase A; cysteine synthase A	76860..77771	Alkaliphilus metalliredigens QYMF	5310099
YP_001317959.1	CDS	Amet_0057	NC_009633.1	77883	79118	D	PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: cac:CAC0102 O-acetylhomoserine (thiol)-lyase; cysteine synthase	77883..79118	Alkaliphilus metalliredigens QYMF	5310100
YP_001317960.1	CDS	Amet_0058	NC_009633.1	79684	80958	D	PFAM: glutamyl-tRNA reductase; Shikimate/quinate 5-dehydrogenase; KEGG: cno:NT01CX_0264 glutamyl-tRNA reductase; glutamyl-tRNA reductase	79684..80958	Alkaliphilus metalliredigens QYMF	5310101
YP_001317961.1	CDS	Amet_0059	NC_009633.1	80971	81699	D	TIGRFAM: siroheme synthase; KEGG: gka:GK0404 siroheme synthase; siroheme synthase	80971..81699	Alkaliphilus metalliredigens QYMF	5310102
YP_001317962.1	CDS	Amet_0060	NC_009633.1	81632	82582	D	TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase; KEGG: bsu:BG10342 porphobilinogen deaminase (hydroxymethylbilane synthase); porphobilinogen deaminase	81632..82582	Alkaliphilus metalliredigens QYMF	5310103
YP_001317963.1	CDS	Amet_0061	NC_009633.1	82626	84134	D	TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Uroporphyrinogen III synthase HEM4; KEGG: dsy:DSY2224 hypothetical protein; uroporphyrin-III C-methyltransferase	82626..84134	Alkaliphilus metalliredigens QYMF	5310104
YP_001317964.1	CDS	Amet_0062	NC_009633.1	84135	85109	D	catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase	84135..85109	Alkaliphilus metalliredigens QYMF	5310105
YP_001317965.1	CDS	Amet_0063	NC_009633.1	85091	86413	D	TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III; KEGG: chy:CHY_1212 glutamate-1-semialdehyde-2,1-aminomutase; glutamate-1-semialdehyde-2,1-aminomutase	85091..86413	Alkaliphilus metalliredigens QYMF	5310106
YP_001317966.1	CDS	Amet_0064	NC_009633.1	86836	87210	D	PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: ppd:Ppro_1299 cobalamin (vitamin B12) biosynthesis CbiX protein; cobalamin (vitamin B12) biosynthesis CbiX protein	86836..87210	Alkaliphilus metalliredigens QYMF	5310107
YP_001317967.1	CDS	Amet_0065	NC_009633.1	87298	88701	D	TIGRFAM: cobyrinic acid a,c-diamide synthase; PFAM: Cobyrinic acid a,c-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: tte:TTE0375 Cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase	87298..88701	Alkaliphilus metalliredigens QYMF	5310108
YP_001317968.1	CDS	Amet_0066	NC_009633.1	88804	89325	D	KEGG: tte:TTE0378 hypothetical protein; hypothetical protein	88804..89325	Alkaliphilus metalliredigens QYMF	5310109
YP_001317969.1	CDS	Amet_0067	NC_009633.1	89315	90061	D	KEGG: ctc:CTC00742 hypothetical protein; hypothetical protein	89315..90061	Alkaliphilus metalliredigens QYMF	5310110
YP_001317970.1	CDS	Amet_0068	NC_009633.1	90100	90975	D	PFAM: GHMP kinase; KEGG: lin:lin1134 hypothetical protein; GHMP kinase	90100..90975	Alkaliphilus metalliredigens QYMF	5310111
YP_001317971.1	CDS	Amet_0069	NC_009633.1	90992	91612	D	PFAM: Precorrin-8X methylmutase CbiC/CobH; KEGG: cpr:CPR_1241 precorrin-8X methylmutase; precorrin-8X methylmutase CbiC/CobH	90992..91612	Alkaliphilus metalliredigens QYMF	5310112
YP_001317972.1	CDS	cbiD	NC_009633.1	91627	92760	D	Catalyzes the methylation of C-1 in cobalt-precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A; cobalt-precorrin-6A synthase	91627..92760	Alkaliphilus metalliredigens QYMF	5310113
YP_001317973.1	CDS	Amet_0071	NC_009633.1	92753	93373	D	TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: ctc:CTC00734 precorrin-6B methylase/decarboxylase cbiT/cbiE; precorrin-6Y C5,15-methyltransferase subunit CbiE	92753..93373	Alkaliphilus metalliredigens QYMF	5310114
YP_001317974.1	CDS	Amet_0072	NC_009633.1	93366	93974	D	TIGRFAM: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; KEGG: fnu:FN0964 precorrin-8W decarboxylase; precorrin-6Y C5,15-methyltransferase subunit CbiT	93366..93974	Alkaliphilus metalliredigens QYMF	5310115
YP_001317975.1	CDS	Amet_0073	NC_009633.1	93964	94686	D	TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mta:Moth_1091 precorrin-2 C20-methyltransferase; precorrin-2 C(20)-methyltransferase	93964..94686	Alkaliphilus metalliredigens QYMF	5310116
YP_001317976.1	CDS	Amet_0074	NC_009633.1	94679	95446	D	TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: fnu:FN0957 precorrin-4 C11-methyltransferase; precorrin-4 C(11)-methyltransferase	94679..95446	Alkaliphilus metalliredigens QYMF	5310117
YP_001317977.1	CDS	Amet_0075	NC_009633.1	95443	96507	D	PFAM: cobalamin (vitamin B12) biosynthesis CbiG protein; KEGG: fnu:FN0952 cobalamin biosynthesis protein G; cobalamin (vitamin B12) biosynthesis protein CbiG	95443..96507	Alkaliphilus metalliredigens QYMF	5310118
YP_001317978.1	CDS	Amet_0076	NC_009633.1	96579	97319	D	TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: gme:Gmet_0485 cobyric acid synthase CobQ:precorrin-3B C17-methyltransferase region; precorrin-3B C(17)-methyltransferase	96579..97319	Alkaliphilus metalliredigens QYMF	5310119
YP_001317979.1	CDS	Amet_0077	NC_009633.1	97316	98092	D	TIGRFAM: precorrin-6x reductase; PFAM: Precorrin-6x reductase CbiJ/CobK; KEGG: mta:Moth_1223 precorrin-6x reductase; precorrin-6x reductase	97316..98092	Alkaliphilus metalliredigens QYMF	5310120
YP_001317980.1	CDS	Amet_0078	NC_009633.1	98625	99125	D	KEGG: ctc:CTC00217 hypothetical protein; hypothetical protein	98625..99125	Alkaliphilus metalliredigens QYMF	5310121
YP_001317981.1	CDS	Amet_0079	NC_009633.1	99267	99452	D	hypothetical protein	99267..99452	Alkaliphilus metalliredigens QYMF	5310122
YP_001317982.1	CDS	Amet_0080	NC_009633.1	99506	99682	R	hypothetical protein	complement(99506..99682)	Alkaliphilus metalliredigens QYMF	5310123
YP_001317983.1	CDS	Amet_0081	NC_009633.1	99846	101276	D	PFAM: Orn/Lys/Arg decarboxylase, major region; Orn/Lys/Arg decarboxylase domain protein; Soluble liver antigen/liver pancreas antigen; KEGG: tte:TTE0093 Arginine/lysine/ornithine decarboxylases; Orn/Lys/Arg decarboxylase, major region	99846..101276	Alkaliphilus metalliredigens QYMF	5310124
YP_001317984.1	CDS	Amet_0082	NC_009633.1	101366	102001	D	PFAM: thymidylate kinase; KEGG: lga:LGAS_0372 thymidylate kinase; dTMP kinase	101366..102001	Alkaliphilus metalliredigens QYMF	5310125
YP_001317985.1	CDS	Amet_0083	NC_009633.1	101998	102327	D	PFAM: protein of unknown function DUF970; KEGG: cac:CAC0299 protein from nitrogen regulatory protein P-II (GlnB) family, ortholog YAAQ B.subtilis; hypothetical protein	101998..102327	Alkaliphilus metalliredigens QYMF	5310126
YP_001317986.1	CDS	Amet_0084	NC_009633.1	102347	103336	D	TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: tte:TTE0097 ATPase involved in DNA replication; DNA polymerase III subunit delta'	102347..103336	Alkaliphilus metalliredigens QYMF	5310127
YP_001317987.1	CDS	Amet_0085	NC_009633.1	103330	104226	D	PFAM: PSP1 domain protein; KEGG: ctc:CTC00222 tpl protein; PSP1 domain-containing protein	103330..104226	Alkaliphilus metalliredigens QYMF	5310128
YP_001317988.1	CDS	Amet_0086	NC_009633.1	104393	105001	D	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: ctc:CTC00146 thiol:disulfide interchange protein TlpA; alkyl hydroperoxide reductase	104393..105001	Alkaliphilus metalliredigens QYMF	5310129
YP_001317989.1	CDS	Amet_0087	NC_009633.1	105104	105847	D	Heat shock-induced; putative RNA polymerase sigma factor SigI	105104..105847	Alkaliphilus metalliredigens QYMF	5310130
YP_001317990.1	CDS	Amet_0088	NC_009633.1	105840	106865	D	KEGG: cth:Cthe_2974 hypothetical protein; hypothetical protein	105840..106865	Alkaliphilus metalliredigens QYMF	5310131
YP_001317991.1	CDS	Amet_0089	NC_009633.1	106957	107799	D	hypothetical protein	106957..107799	Alkaliphilus metalliredigens QYMF	5310132
YP_001317992.1	CDS	Amet_0090	NC_009633.1	107951	108718	D	PFAM: methyltransferase small; Methyltransferase type 11; KEGG: cth:Cthe_2102 methyltransferase small; methyltransferase small	107951..108718	Alkaliphilus metalliredigens QYMF	5310133
YP_001317993.1	CDS	Amet_0091	NC_009633.1	108711	109550	D	PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: tte:TTE0104 predicted methyltransferases; uroporphyrin-III C/tetrapyrrole methyltransferase	108711..109550	Alkaliphilus metalliredigens QYMF	5310134
YP_001317994.1	CDS	Amet_0092	NC_009633.1	109662	109901	R	TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: cth:Cthe_2100 transcriptional regulator, AbrB family; AbrB family transcriptional regulator	complement(109662..109901)	Alkaliphilus metalliredigens QYMF	5310135
YP_001317995.1	CDS	Amet_0093	NC_009633.1	110289	111707	D	TIGRFAM: metal dependent phophohydrolase; PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: tte:TTE0109 tRNA nucleotidyltransferase/poly(A) polymerase; polynucleotide adenylyltransferase/metal dependent phosphohydrolase	110289..111707	Alkaliphilus metalliredigens QYMF	5310136
YP_001317996.1	CDS	Amet_0094	NC_009633.1	111825	113273	R	TIGRFAM: putative nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase and related; KEGG: dsy:DSY0787 nicotinate phosphoribosyltransferase; putative nicotinate phosphoribosyltransferase	complement(111825..113273)	Alkaliphilus metalliredigens QYMF	5310137
YP_001317997.1	CDS	Amet_0095	NC_009633.1	113529	114104	D	PFAM: nucleoside recognition domain protein; KEGG: mta:Moth_1356 nucleoside recognition; nucleoside recognition domain-containing protein	113529..114104	Alkaliphilus metalliredigens QYMF	5310138
YP_001317998.1	CDS	Amet_0096	NC_009633.1	114104	114640	D	PFAM: nucleoside recognition domain protein; KEGG: ctc:CTC00239 spore maturation protein B; nucleoside recognition domain-containing protein	114104..114640	Alkaliphilus metalliredigens QYMF	5310139
YP_001317999.1	CDS	Amet_0097	NC_009633.1	114705	115664	D	PFAM: peptidase S58, DmpA; KEGG: cno:NT01CX_1082 peptidase family T4; peptidase S58, DmpA	114705..115664	Alkaliphilus metalliredigens QYMF	5310140
YP_001318000.1	CDS	Amet_0098	NC_009633.1	115941	116507	R	PFAM: Accessory gene regulator B; KEGG: sao:SAOUHSC_02261 accessory gene regulator protein B; accessory gene regulator B	complement(115941..116507)	Alkaliphilus metalliredigens QYMF	5310141
YP_001318001.1	CDS	Amet_0099	NC_009633.1	116857	117228	D	TIGRFAM: bacteriocin, lactococcin 972 family; KEGG: dsy:DSY2024 hypothetical protein; bacteriocin	116857..117228	Alkaliphilus metalliredigens QYMF	5310142
YP_001318002.1	CDS	Amet_0100	NC_009633.1	117324	119636	D	KEGG: cpe:PCP08 hypothetical protein; hypothetical protein	117324..119636	Alkaliphilus metalliredigens QYMF	5310143
YP_001318003.1	CDS	Amet_0101	NC_009633.1	119636	120268	D	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ctc:CTC02098 transporter; ABC transporter-like protein	119636..120268	Alkaliphilus metalliredigens QYMF	5310144
YP_001318004.1	CDS	Amet_0102	NC_009633.1	120431	121693	R	PFAM: ATP-binding region, ATPase domain protein; KEGG: swo:Swol_2401 signal transduction histidine kinase regulating citrate/malate metabolism; signal transduction histidine kinase regulating citrate/malate metabolism	complement(120431..121693)	Alkaliphilus metalliredigens QYMF	5310145
YP_001318005.1	CDS	Amet_0103	NC_009633.1	121716	122486	R	PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: tte:TTE0561 response regulators of cell autolysis; LytTR family two component transcriptional regulator	complement(121716..122486)	Alkaliphilus metalliredigens QYMF	5310146
YP_001318006.1	CDS	Amet_0104	NC_009633.1	123522	123989	R	hypothetical protein	complement(123522..123989)	Alkaliphilus metalliredigens QYMF	5310147
YP_001318007.1	CDS	Amet_0105	NC_009633.1	124354	124602	D	hypothetical protein	124354..124602	Alkaliphilus metalliredigens QYMF	5310148
YP_001318008.1	CDS	Amet_0107	NC_009633.1	125266	126558	R	hypothetical protein	complement(125266..126558)	Alkaliphilus metalliredigens QYMF	5310150
YP_001318009.1	CDS	Amet_0108	NC_009633.1	126551	127066	R	TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: ctc:CTC00553 RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 factor	complement(126551..127066)	Alkaliphilus metalliredigens QYMF	5310151
YP_001318010.1	CDS	Amet_0109	NC_009633.1	127234	127812	R	hypothetical protein	complement(127234..127812)	Alkaliphilus metalliredigens QYMF	5310152
YP_001318011.1	CDS	Amet_0110	NC_009633.1	128720	130687	D	TIGRFAM: methionyl-tRNA synthetase; methionyl-tRNA synthetase, beta subunit; PFAM: t-RNA-binding domain protein; tRNA synthetase class I (M); KEGG: cth:Cthe_2096 methionyl-tRNA synthetase; methionyl-tRNA synthetase	128720..130687	Alkaliphilus metalliredigens QYMF	5310153
YP_001318012.1	CDS	Amet_0111	NC_009633.1	130702	131469	D	TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: cth:Cthe_2095 hydrolase, TatD family; TatD family hydrolase	130702..131469	Alkaliphilus metalliredigens QYMF	5310154
YP_001318013.1	CDS	Amet_0113	NC_009633.1	131924	132112	D	hypothetical protein	131924..132112	Alkaliphilus metalliredigens QYMF	5310156
YP_001318014.1	CDS	Amet_0114	NC_009633.1	132215	132970	D	PFAM: protein of unknown function DUF1568; KEGG: tte:TTE2528 predicted transposase; hypothetical protein	132215..132970	Alkaliphilus metalliredigens QYMF	5310157
YP_001318015.1	CDS	Amet_0115	NC_009633.1	133051	133362	D	KEGG: swo:Swol_2283 hypothetical protein; hypothetical protein	133051..133362	Alkaliphilus metalliredigens QYMF	5310158
YP_001318016.1	CDS	Amet_0116	NC_009633.1	133473	133754	D	PFAM: IS66 Orf2 family protein; KEGG: swo:Swol_2282 IS66 Orf2 like; IS66 Orf2 family protein	133473..133754	Alkaliphilus metalliredigens QYMF	5310159
YP_001318017.1	CDS	Amet_0117	NC_009633.1	133833	135434	D	PFAM: transposase IS66; KEGG: swo:Swol_2281 transposase and inactivated derivatives-like protein; transposase IS66	133833..135434	Alkaliphilus metalliredigens QYMF	5310160
YP_001318018.1	CDS	Amet_0118	NC_009633.1	135705	137579	D	PFAM: transposase, IS4 family protein; KEGG: tte:TTE2604 transposase; transposase, IS4 family protein	135705..137579	Alkaliphilus metalliredigens QYMF	5310161
YP_001318019.1	CDS	Amet_0119	NC_009633.1	137650	138087	D	KEGG: swo:Swol_2192 hypothetical protein; hypothetical protein	137650..138087	Alkaliphilus metalliredigens QYMF	5310162
YP_001318020.1	CDS	Amet_0121	NC_009633.1	138305	138898	R	hypothetical protein	complement(138305..138898)	Alkaliphilus metalliredigens QYMF	5310164
YP_001318021.1	CDS	Amet_0122	NC_009633.1	139281	140108	R	hypothetical protein	complement(139281..140108)	Alkaliphilus metalliredigens QYMF	5310165
YP_001318022.1	CDS	Amet_0123	NC_009633.1	140128	140961	R	hypothetical protein	complement(140128..140961)	Alkaliphilus metalliredigens QYMF	5310166
YP_001318023.1	CDS	Amet_0124	NC_009633.1	141199	141819	R	PFAM: Accessory gene regulator B; KEGG: cth:Cthe_1310 accessory gene regulator B; accessory gene regulator B	complement(141199..141819)	Alkaliphilus metalliredigens QYMF	5310167
YP_001318024.1	CDS	Amet_0126	NC_009633.1	142451	142660	D	KEGG: swo:Swol_2198 transposase; transposase	142451..142660	Alkaliphilus metalliredigens QYMF	5310169
YP_001318025.1	CDS	Amet_0127	NC_009633.1	142710	143483	D	PFAM: protein of unknown function DUF1568; KEGG: tte:TTE2528 predicted transposase; hypothetical protein	142710..143483	Alkaliphilus metalliredigens QYMF	5310170
YP_001318026.1	CDS	Amet_0128	NC_009633.1	143592	144113	D	hypothetical protein	143592..144113	Alkaliphilus metalliredigens QYMF	5310171
YP_001318027.1	CDS	Amet_0129	NC_009633.1	144336	144704	D	PFAM: regulatory protein, ArsR; KEGG: cth:Cthe_0245 transcriptional regulator, ArsR family; regulatory protein ArsR	144336..144704	Alkaliphilus metalliredigens QYMF	5310172
YP_001318028.1	CDS	Amet_0130	NC_009633.1	144718	147084	D	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: dsy:DSY0829 hypothetical protein; heavy metal translocating P-type ATPase	144718..147084	Alkaliphilus metalliredigens QYMF	5310173
YP_001318029.1	CDS	uvsE	NC_009633.1	147192	148448	D	PFAM: UV-endonuclease UvdE; Protein of unknown function DUF1722; KEGG: cno:NT01CX_0232 UV DNA damage endonuclease (UV-endonuclease) UvdE; putative UV damage endonuclease	147192..148448	Alkaliphilus metalliredigens QYMF	5310174
YP_001318030.1	CDS	Amet_0132	NC_009633.1	148749	149123	D	PFAM: regulatory protein GntR, HTH; KEGG: swo:Swol_1621 transcriptional regulator, GntR family; regulatory protein GntR	148749..149123	Alkaliphilus metalliredigens QYMF	5310175
YP_001318031.1	CDS	Amet_0133	NC_009633.1	149120	149821	D	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mta:Moth_1174 ABC transporter related; ABC transporter-like protein	149120..149821	Alkaliphilus metalliredigens QYMF	5310176
YP_001318032.1	CDS	Amet_0134	NC_009633.1	149808	150611	D	KEGG: mta:Moth_1173 hypothetical protein; hypothetical protein	149808..150611	Alkaliphilus metalliredigens QYMF	5310177
YP_001318033.1	CDS	Amet_0135	NC_009633.1	150790	151818	R	PFAM: SCP-like extracellular protein; KEGG: cth:Cthe_0779 copper amine oxidase-like protein; SCP-like extracellular protein	complement(150790..151818)	Alkaliphilus metalliredigens QYMF	5310178
YP_001318034.1	CDS	Amet_0136	NC_009633.1	152247	153278	D	PFAM: protein of unknown function DUF348; 3D domain protein; G5 domain protein; KEGG: tte:TTE0112 hypothetical protein; hypothetical protein	152247..153278	Alkaliphilus metalliredigens QYMF	5310179
YP_001318035.1	CDS	Amet_0137	NC_009633.1	153455	154009	D	TIGRFAM: primase/topoisomerase like protein; PFAM: TOPRIM domain protein; SMART: Toprim sub domain protein; KEGG: ctc:CTC00246 DNA primase; primase/topoisomerase-like protein	153455..154009	Alkaliphilus metalliredigens QYMF	5310180
YP_001318036.1	CDS	ksgA	NC_009633.1	154002	154865	D	catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase	154002..154865	Alkaliphilus metalliredigens QYMF	5310181
YP_001318037.1	CDS	Amet_0139	NC_009633.1	154949	156295	D	KEGG: ctc:CTC00249 hypothetical protein; hypothetical protein	154949..156295	Alkaliphilus metalliredigens QYMF	5310182
YP_001318038.1	CDS	Amet_0140	NC_009633.1	156612	157619	D	PFAM: sodium/calcium exchanger membrane region; KEGG: rfr:Rfer_1133 sodium/calcium exchanger membrane protein; sodium/calcium exchanger membrane protein	156612..157619	Alkaliphilus metalliredigens QYMF	5310183
YP_001318039.1	CDS	Amet_0141	NC_009633.1	157638	158084	R	PFAM: Rhodanese domain protein; KEGG: chy:CHY_0566 rhodanese-like domain protein; rhodanese domain-containing protein	complement(157638..158084)	Alkaliphilus metalliredigens QYMF	5310184
YP_001318040.1	CDS	Amet_0142	NC_009633.1	158251	158700	R	KEGG: mta:Moth_1874 hypothetical protein; hypothetical protein	complement(158251..158700)	Alkaliphilus metalliredigens QYMF	5310185
YP_001318041.1	CDS	Amet_0143	NC_009633.1	158697	159026	R	KEGG: cth:Cthe_0065 hypothetical protein; hypothetical protein	complement(158697..159026)	Alkaliphilus metalliredigens QYMF	5310186
YP_001318042.1	CDS	Amet_0144	NC_009633.1	159128	159556	D	hypothetical protein	159128..159556	Alkaliphilus metalliredigens QYMF	5310187
YP_001318043.1	CDS	Amet_0145	NC_009633.1	159718	160185	R	KEGG: cac:CAC0449 hypothetical protein; hypothetical protein	complement(159718..160185)	Alkaliphilus metalliredigens QYMF	5310188
YP_001318044.1	CDS	Amet_0146	NC_009633.1	160620	162173	D	PFAM: C4-dicarboxylate anaerobic carrier; AbgT putative transporter; short chain fatty acid transporter; KEGG: ctc:CTC01323 aminobenzoyl-glutamate transport protein; AbgT transporter	160620..162173	Alkaliphilus metalliredigens QYMF	5310189
YP_001318045.1	CDS	Amet_0147	NC_009633.1	162673	164226	D	PFAM: C4-dicarboxylate anaerobic carrier; AbgT putative transporter; KEGG: ctc:CTC01323 aminobenzoyl-glutamate transport protein; putative transporter AbgT	162673..164226	Alkaliphilus metalliredigens QYMF	5310190
YP_001318046.1	CDS	Amet_0148	NC_009633.1	164401	165516	D	TIGRFAM: peptidase T-like protein; PFAM: peptidase M20; peptidase M42 family protein; peptidase dimerisation domain protein; KEGG: cpe:CPE2463 probable peptidase; peptidase T-like protein	164401..165516	Alkaliphilus metalliredigens QYMF	5310191
YP_001318047.1	CDS	Amet_0149	NC_009633.1	165739	167214	D	PFAM: Orn/Lys/Arg decarboxylase, major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: cth:Cthe_1918 Orn/Lys/Arg decarboxylase, major region; Orn/Lys/Arg decarboxylase, major region	165739..167214	Alkaliphilus metalliredigens QYMF	5310192
YP_001318048.1	CDS	Amet_0152	NC_009633.1	168266	169228	D	TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: tte:TTE0026 transcriptional regulator; cell envelope-related transcriptional attenuator	168266..169228	Alkaliphilus metalliredigens QYMF	5310195
YP_001318049.1	CDS	murC	NC_009633.1	169403	170785	R	Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase	complement(169403..170785)	Alkaliphilus metalliredigens QYMF	5310196
YP_001318050.1	CDS	Amet_0154	NC_009633.1	171020	171841	D	TIGRFAM: pur operon repressor; PFAM: phosphoribosyltransferase; purine repressor-like; KEGG: tte:TTE2574 purine operon repressor; pur operon repressor	171020..171841	Alkaliphilus metalliredigens QYMF	5310197
YP_001318051.1	CDS	Amet_0155	NC_009633.1	171978	172274	D	stage V sporulation protein G; essential for spore formation and a negative regulator of asymmetric septation in Bacillus; involved in methicillin-resistance, biofilm formation and capsular polysaccharide synthesis in Staphylococcus; regulatory protein SpoVG	171978..172274	Alkaliphilus metalliredigens QYMF	5310198
YP_001318052.1	CDS	glmU	NC_009633.1	172516	173886	D	forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase	172516..173886	Alkaliphilus metalliredigens QYMF	5310199
YP_001318053.1	CDS	Amet_0157	NC_009633.1	173936	174883	D	TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; KEGG: cno:NT01CX_1015 ribose-phosphate pyrophosphokinase; ribose-phosphate pyrophosphokinase	173936..174883	Alkaliphilus metalliredigens QYMF	5310200
YP_001318054.1	CDS	Amet_0158	NC_009633.1	174900	175457	D	Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase	174900..175457	Alkaliphilus metalliredigens QYMF	5310201
YP_001318055.1	CDS	Amet_0159	NC_009633.1	175575	175955	D	KEGG: tte:TTE2566 hypothetical protein; hypothetical protein	175575..175955	Alkaliphilus metalliredigens QYMF	5310202
YP_001318056.1	CDS	Amet_0160	NC_009633.1	176043	179567	D	TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: tte:TTE2565 Transcription-repair coupling factor - superfamily II helicase; transcription-repair coupling factor	176043..179567	Alkaliphilus metalliredigens QYMF	5310203
YP_001318057.1	CDS	Amet_0161	NC_009633.1	179607	180566	D	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: tte:TTE2564 parvulin-like peptidyl-prolyl isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase	179607..180566	Alkaliphilus metalliredigens QYMF	5310204
YP_001318058.1	CDS	Amet_0162	NC_009633.1	180682	181233	D	TIGRFAM: transcriptional regulator, AbrB family; Sporulation stage V, protein T; PFAM: SpoVT/AbrB domain protein; KEGG: mta:Moth_0083 transcriptional regulator, AbrB family; AbrB family transcriptional regulator	180682..181233	Alkaliphilus metalliredigens QYMF	5310205
YP_001318059.1	CDS	Amet_0163	NC_009633.1	181462	183060	D	PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: swo:Swol_0081 stage V sporulation protein B; polysaccharide biosynthesis protein	181462..183060	Alkaliphilus metalliredigens QYMF	5310206
YP_001318060.1	CDS	Amet_0164	NC_009633.1	183074	184534	D	TIGRFAM: MazG family protein; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; MazG nucleotide pyrophosphohydrolase; KEGG: cpr:CPR_2489 MazG family protein; MazG family protein	183074..184534	Alkaliphilus metalliredigens QYMF	5310207
YP_001318061.1	CDS	Amet_0165	NC_009633.1	184646	184924	D	PFAM: histone family protein DNA-binding protein; KEGG: tte:TTE2453 Bacterial nucleoid DNA-binding protein; histone family protein DNA-binding protein	184646..184924	Alkaliphilus metalliredigens QYMF	5310208
YP_001318062.1	CDS	Amet_0166	NC_009633.1	184973	185221	D	PFAM: RNA-binding S4 domain protein; KEGG: cpf:CPF_2801 S4 domain protein; RNA-binding S4 domain-containing protein	184973..185221	Alkaliphilus metalliredigens QYMF	5310209
YP_001318063.1	CDS	Amet_0167	NC_009633.1	185320	185640	D	KEGG: dsy:DSY3280 hypothetical protein; hypothetical protein	185320..185640	Alkaliphilus metalliredigens QYMF	5310210
YP_001318064.1	CDS	Amet_0168	NC_009633.1	185796	186791	D	TIGRFAM: SpoIID/LytB domain protein; PFAM: Stage II sporulation D domain protein; KEGG: tte:TTE2451 sporulation protein and related proteins; SpoIID/LytB domain-containing protein	185796..186791	Alkaliphilus metalliredigens QYMF	5310211
YP_001318065.1	CDS	Amet_0169	NC_009633.1	186860	187150	D	PFAM: YabP family protein; KEGG: tte:TTE2450 hypothetical protein; YabP family protein	186860..187150	Alkaliphilus metalliredigens QYMF	5310212
YP_001318066.1	CDS	Amet_0170	NC_009633.1	187283	187792	D	TIGRFAM: Spore cortex biosynthesis protein YabQ; KEGG: tte:TTE2446 hypothetical protein; spore cortex biosynthesis protein YabQ	187283..187792	Alkaliphilus metalliredigens QYMF	5310213
YP_001318067.1	CDS	Amet_0171	NC_009633.1	187819	188121	D	PFAM: Septum formation initiator; septum formation initiator	187819..188121	Alkaliphilus metalliredigens QYMF	5310214
YP_001318068.1	CDS	Amet_0172	NC_009633.1	188282	188698	D	PFAM: RNA binding S1 domain protein; KEGG: cth:Cthe_2662 RNA binding S1; RNA-binding S1 domain-containing protein	188282..188698	Alkaliphilus metalliredigens QYMF	5310215
YP_001318069.1	CDS	Amet_0173	NC_009633.1	189070	191472	D	KEGG: cth:Cthe_2681 serine phosphatase; TIGRFAM: Sporulation stage II, protein E; PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; sporulation stage II, protein E	189070..191472	Alkaliphilus metalliredigens QYMF	5310216
YP_001318070.1	CDS	Amet_0174	NC_009633.1	191711	192133	R	PFAM: helix-turn-helix domain protein; KEGG: tte:TTE2174 predicted transcriptional regulator; XRE family transcriptional regulator	complement(191711..192133)	Alkaliphilus metalliredigens QYMF	5310217
YP_001318071.1	CDS	Amet_0175	NC_009633.1	192289	192516	D	SMART: helix-turn-helix domain protein; KEGG: tte:TTE2173 hypothetical protein; helix-turn-helix domain-containing protein	192289..192516	Alkaliphilus metalliredigens QYMF	5310218
YP_001318072.1	CDS	Amet_0176	NC_009633.1	192553	192720	D	hypothetical protein	192553..192720	Alkaliphilus metalliredigens QYMF	5310219
YP_001318073.1	CDS	Amet_0177	NC_009633.1	193020	194423	D	TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; Peptidoglycan-binding domain 1 protein; peptidase S41; KEGG: cth:Cthe_1930 carboxyl-terminal protease; carboxyl-terminal protease	193020..194423	Alkaliphilus metalliredigens QYMF	5310220
YP_001318074.1	CDS	Amet_0178	NC_009633.1	194513	195079	R	PFAM: S-layer domain protein; KEGG: cth:Cthe_2384 S-layer-like domain containing protein; S-layer protein	complement(194513..195079)	Alkaliphilus metalliredigens QYMF	5310221
YP_001318075.1	CDS	Amet_0179	NC_009633.1	195233	197347	R	hypothetical protein	complement(195233..197347)	Alkaliphilus metalliredigens QYMF	5310222
YP_001318076.1	CDS	Amet_0180	NC_009633.1	197652	204251	D	PFAM: cell surface receptor IPT/TIG domain protein; Fibronectin, type III domain protein; KEGG: tte:TTE0165 hypothetical protein; fibronectin type III domain-containing protein	197652..204251	Alkaliphilus metalliredigens QYMF	5310223
YP_001318077.1	CDS	Amet_0181	NC_009633.1	204333	207137	D	PFAM: S-layer domain protein; KEGG: tte:TTE0166 S-layer homology domain; S-layer protein	204333..207137	Alkaliphilus metalliredigens QYMF	5310224
YP_001318078.1	CDS	Amet_0182	NC_009633.1	207154	208629	D	PFAM: S-layer domain protein; KEGG: tte:TTE0167 S-layer homology domain; S-layer protein	207154..208629	Alkaliphilus metalliredigens QYMF	5310225
YP_001318079.1	CDS	pyrG	NC_009633.1	208903	210507	D	CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase	208903..210507	Alkaliphilus metalliredigens QYMF	5310226
YP_001318080.1	CDS	Amet_0184	NC_009633.1	211296	213587	D	PFAM: copper amine oxidase domain protein; KEGG: mta:Moth_2343 copper amine oxidase-like; copper amine oxidase domain-containing protein	211296..213587	Alkaliphilus metalliredigens QYMF	5310227
YP_001318081.1	CDS	Amet_0185	NC_009633.1	213738	214517	D	KEGG: rno:690765 hypothetical protein LOC690765; hypothetical protein	213738..214517	Alkaliphilus metalliredigens QYMF	5310228
YP_001318082.1	CDS	Amet_0186	NC_009633.1	214933	216078	D	KEGG: swo:Swol_0134 hypothetical protein; hypothetical protein	214933..216078	Alkaliphilus metalliredigens QYMF	5310229
YP_001318083.1	CDS	Amet_0187	NC_009633.1	216408	217619	D	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: dsy:DSY3360 hypothetical protein; RND family efflux transporter MFP subunit	216408..217619	Alkaliphilus metalliredigens QYMF	5310230
YP_001318084.1	CDS	Amet_0188	NC_009633.1	217623	220772	D	PFAM: acriflavin resistance protein; KEGG: dsy:DSY3359 hypothetical protein; acriflavin resistance protein	217623..220772	Alkaliphilus metalliredigens QYMF	5310231
YP_001318085.1	CDS	Amet_0189	NC_009633.1	220777	221364	D	PFAM: regulatory protein, TetR; KEGG: swo:Swol_0177 putative transcriptional regulator, TetR family; TetR family transcriptional regulator	220777..221364	Alkaliphilus metalliredigens QYMF	5310232
YP_001318086.1	CDS	Amet_0190	NC_009633.1	221516	223780	D	PFAM: Spore coat protein CotH; KEGG: cth:Cthe_0239 cellulosome enzyme, dockerin type I; spore coat protein CotH	221516..223780	Alkaliphilus metalliredigens QYMF	5310233
YP_001318087.1	CDS	Amet_0191	NC_009633.1	223887	225806	D	PFAM: S-layer domain protein; KEGG: sth:STH3168 S-layer associated protein, putataive; S-layer protein	223887..225806	Alkaliphilus metalliredigens QYMF	5310234
YP_001318088.1	CDS	Amet_0192	NC_009633.1	226053	227249	D	PFAM: lipopolysaccharide biosynthesis protein; KEGG: cth:Cthe_2347 lipopolysaccharide biosynthesis; lipopolysaccharide biosynthesis protein	226053..227249	Alkaliphilus metalliredigens QYMF	5310235
YP_001318089.1	CDS	Amet_0193	NC_009633.1	227335	230301	D	PFAM: TPR repeat-containing protein; O-antigen polymerase; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: tte:TTE0644 TPR-repeat-containing proteins; O-antigen polymerase	227335..230301	Alkaliphilus metalliredigens QYMF	5310236
YP_001318090.1	CDS	Amet_0194	NC_009633.1	230434	230949	D	PFAM: regulatory protein, MarR; KEGG: gme:Gmet_2889 hypothetical protein; regulatory protein MarR	230434..230949	Alkaliphilus metalliredigens QYMF	5310237
YP_001318091.1	CDS	Amet_0195	NC_009633.1	230975	231376	D	TIGRFAM: nucleotidyltransferase substrate binding protein, HI0074 family; PFAM: Nucleotidyltransferase substrate binding protein, HI0074; KEGG: tte:TTE1987 hypothetical protein; nucleotidyltransferase substrate binding protein	230975..231376	Alkaliphilus metalliredigens QYMF	5310238
YP_001318092.1	CDS	Amet_0198	NC_009633.1	231835	232173	D	KEGG: tte:TTE1265 type IV pilus assembly protein PilA; hypothetical protein	231835..232173	Alkaliphilus metalliredigens QYMF	5310241
YP_001318093.1	CDS	Amet_0199	NC_009633.1	232387	233121	D	hypothetical protein	232387..233121	Alkaliphilus metalliredigens QYMF	5310242
YP_001318094.1	CDS	Amet_0200	NC_009633.1	233140	234666	D	KEGG: rde:RD1_A0043 RC169; hypothetical protein	233140..234666	Alkaliphilus metalliredigens QYMF	5310243
YP_001318095.1	CDS	Amet_0201	NC_009633.1	234714	235337	D	PFAM: sugar transferase; KEGG: bha:BH3716 galactosyltransferase; sugar transferase	234714..235337	Alkaliphilus metalliredigens QYMF	5310244
YP_001318096.1	CDS	Amet_0202	NC_009633.1	235359	237137	D	PFAM: Heparinase II/III family protein; KEGG: gme:Gmet_1501 heparinase II/III-like; heparinase II/III family protein	235359..237137	Alkaliphilus metalliredigens QYMF	5310245
YP_001318097.1	CDS	Amet_0203	NC_009633.1	237134	238351	D	PFAM: glycosyl transferase, group 1; KEGG: gme:Gmet_1502 glycosyl transferase, group 1; group 1 glycosyl transferase	237134..238351	Alkaliphilus metalliredigens QYMF	5310246
YP_001318098.1	CDS	Amet_0204	NC_009633.1	238363	239223	D	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein; Male sterility C-terminal domain; KEGG: pme:NATL1_08611 hypothetical protein; 3-beta hydroxysteroid dehydrogenase/isomerase	238363..239223	Alkaliphilus metalliredigens QYMF	5310247
YP_001318099.1	CDS	Amet_0205	NC_009633.1	239288	240424	D	PFAM: glycosyl transferase, group 1; KEGG: pab:PAB1604 LPS biosynthesis RfbU related protein; group 1 glycosyl transferase	239288..240424	Alkaliphilus metalliredigens QYMF	5310248
YP_001318100.1	CDS	Amet_0206	NC_009633.1	240436	241665	D	PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase-like; KEGG: cpf:CPF_0468 UDP-glucose/GDP-mannose dehydrogenase family; UDP-glucose/GDP-mannose dehydrogenase	240436..241665	Alkaliphilus metalliredigens QYMF	5310249
YP_001318101.1	CDS	Amet_0207	NC_009633.1	241682	242773	D	PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: spn:SP_0357 UDP-N-acetylglucosamine-2-epimerase; UDP-N-acetylglucosamine 2-epimerase	241682..242773	Alkaliphilus metalliredigens QYMF	5310250
YP_001318102.1	CDS	Amet_0208	NC_009633.1	242913	243170	D	KEGG: cth:Cthe_2340 UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase	242913..243170	Alkaliphilus metalliredigens QYMF	5310251
YP_001318103.1	CDS	Amet_0209	NC_009633.1	243195	244343	D	PFAM: glycosyl transferase, group 1; KEGG: pac:PPA0673 putative glycosyl transferase group 1; group 1 glycosyl transferase	243195..244343	Alkaliphilus metalliredigens QYMF	5310252
YP_001318104.1	CDS	Amet_0210	NC_009633.1	244340	245611	D	PFAM: O-antigen polymerase; KEGG: bsu:BG12692 biosynthesis of teichuronic acid, polymerization; O-antigen polymerase	244340..245611	Alkaliphilus metalliredigens QYMF	5310253
YP_001318105.1	CDS	Amet_0211	NC_009633.1	245637	246746	D	KEGG: bad:BAD_1383 hypothetical protein; hypothetical protein	245637..246746	Alkaliphilus metalliredigens QYMF	5310254
YP_001318106.1	CDS	Amet_0212	NC_009633.1	246845	248014	D	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: dps:DPPB80 related to F420H2-dehydrogenase, beta subunit; 4Fe-4S ferredoxin	246845..248014	Alkaliphilus metalliredigens QYMF	5310255
YP_001318107.1	CDS	Amet_0213	NC_009633.1	248199	248771	D	hypothetical protein	248199..248771	Alkaliphilus metalliredigens QYMF	5310256
YP_001318108.1	CDS	Amet_0214	NC_009633.1	248847	250412	D	TIGRFAM: integral membrane protein MviN; PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: tte:TTE0176 uncharacterized membrane protein, putative virulence factor; integral membrane protein MviN	248847..250412	Alkaliphilus metalliredigens QYMF	5310257
YP_001318109.1	CDS	Amet_0215	NC_009633.1	250607	251038	D	KEGG: bfs:BF2224 hypothetical protein; hypothetical protein	250607..251038	Alkaliphilus metalliredigens QYMF	5310258
YP_001318110.1	CDS	Amet_0216	NC_009633.1	251357	252193	D	PFAM: protein of unknown function DUF1568; KEGG: swo:Swol_0164 transposase and inactivated derivatives-like protein; hypothetical protein	251357..252193	Alkaliphilus metalliredigens QYMF	5310259
YP_001318111.1	CDS	Amet_0217	NC_009633.1	252280	253194	D	TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: tte:TTE0736 transcriptional regulator; cell envelope-related transcriptional attenuator	252280..253194	Alkaliphilus metalliredigens QYMF	5310260
YP_001318112.1	CDS	Amet_0218	NC_009633.1	253695	254633	D	KEGG: dsy:DSY2001 hypothetical protein; hypothetical protein	253695..254633	Alkaliphilus metalliredigens QYMF	5310261
YP_001318113.1	CDS	Amet_0219	NC_009633.1	254937	255203	D	hypothetical protein	254937..255203	Alkaliphilus metalliredigens QYMF	5310262
YP_001318114.1	CDS	Amet_0220	NC_009633.1	255586	257124	D	TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase, ChlI subunit; ATPase associated with various cellular activities, AAA_5; KEGG: tte:TTE1455 predicted ATPase with chaperone activity; Mg chelatase subunit ChlI	255586..257124	Alkaliphilus metalliredigens QYMF	5310263
YP_001318115.1	CDS	Amet_0221	NC_009633.1	257136	258272	D	TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: cth:Cthe_0459 DNA protecting protein DprA; DNA protecting protein DprA	257136..258272	Alkaliphilus metalliredigens QYMF	5310264
YP_001318116.1	CDS	Amet_0222	NC_009633.1	258377	259870	D	PFAM: AAA-4 family protein; KEGG: mbu:Mbur_0507 divergent AAA ATPase; putative transcriptional regulator	258377..259870	Alkaliphilus metalliredigens QYMF	5310265
YP_001318117.1	CDS	Amet_0223	NC_009633.1	259919	260167	D	hypothetical protein	259919..260167	Alkaliphilus metalliredigens QYMF	5310266
YP_001318118.1	CDS	Amet_0224	NC_009633.1	260697	263663	D	KEGG: stm:STM4489 putative DNA helicases; putative DNA helicase	260697..263663	Alkaliphilus metalliredigens QYMF	5310267
YP_001318119.1	CDS	Amet_0225	NC_009633.1	263768	265660	D	TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor, interaction domain-containing protein; Propionate catabolism activator domain protein; ATPase associated with various cellular activities, AAA_5; PAS fold domain protein; SMART: PAS domain containing protein; AAA ATPase; KEGG: chy:CHY_1254 sigma-54 dependent transcriptional regulator; putative PAS/PAC sensor protein	263768..265660	Alkaliphilus metalliredigens QYMF	5310268
YP_001318120.1	CDS	Amet_0226	NC_009633.1	265925	267202	D	PFAM: type III effector Hrp-dependent outers; KEGG: mta:Moth_0726 type III effector Hrp-dependent outers; Hrp-dependent type III effector protein	265925..267202	Alkaliphilus metalliredigens QYMF	5310269
YP_001318121.1	CDS	Amet_0227	NC_009633.1	267254	268414	D	PFAM: iron-containing alcohol dehydrogenase; 3-dehydroquinate synthase; KEGG: msu:MS0069 EutG protein; iron-containing alcohol dehydrogenase	267254..268414	Alkaliphilus metalliredigens QYMF	5310270
YP_001318122.1	CDS	Amet_0228	NC_009633.1	268426	269466	D	TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; KEGG: mta:Moth_0727 4-hydroxythreonine-4-phosphate dehydrogenase; 4-hydroxythreonine-4-phosphate dehydrogenase	268426..269466	Alkaliphilus metalliredigens QYMF	5310271
YP_001318123.1	CDS	Amet_0229	NC_009633.1	269498	270385	D	TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; KEGG: msu:MS0067 DapA protein; dihydrodipicolinate synthase	269498..270385	Alkaliphilus metalliredigens QYMF	5310272
YP_001318124.1	CDS	Amet_0230	NC_009633.1	270564	271649	D	TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: eba:p2A97 hypothetical protein, putative periplasmic binding protein; TRAP transporter solute receptor TAXI family protein	270564..271649	Alkaliphilus metalliredigens QYMF	5310273
YP_001318125.1	CDS	Amet_0231	NC_009633.1	271776	273716	D	TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: dsy:DSY0650 hypothetical protein; TRAP transporter, 4TM/12TM fusion protein	271776..273716	Alkaliphilus metalliredigens QYMF	5310274
YP_001318126.1	CDS	Amet_0232	NC_009633.1	274037	274888	D	PFAM: plasmid pRiA4b ORF-3 family protein; KEGG: tte:TTE0676 hypothetical protein; plasmid pRiA4b ORF-3 family protein	274037..274888	Alkaliphilus metalliredigens QYMF	5310275
YP_001318127.1	CDS	Amet_0234	NC_009633.1	275426	276346	D	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mta:Moth_2297 daunorubicin resistance ABC transporter ATP-binding subunit; ABC transporter-like protein	275426..276346	Alkaliphilus metalliredigens QYMF	5310277
YP_001318128.1	CDS	Amet_0235	NC_009633.1	276348	277184	D	PFAM: ABC-2 type transporter; KEGG: mbu:Mbur_0388 ABC efflux pump, inner membrane subunit; ABC transporter	276348..277184	Alkaliphilus metalliredigens QYMF	5310278
YP_001318129.1	CDS	Amet_0237	NC_009633.1	277746	278450	D	KEGG: cth:Cthe_2132 abortive infection protein, putative; abortive infection protein	277746..278450	Alkaliphilus metalliredigens QYMF	5310280
YP_001318130.1	CDS	Amet_0238	NC_009633.1	278483	278806	D	hypothetical protein	278483..278806	Alkaliphilus metalliredigens QYMF	5310281
YP_001318131.1	CDS	Amet_0239	NC_009633.1	279009	280457	R	KEGG: bcz:BCZK4937 hypothetical protein; hypothetical protein	complement(279009..280457)	Alkaliphilus metalliredigens QYMF	5310282
YP_001318132.1	CDS	Amet_0240	NC_009633.1	280495	282039	R	KEGG: btl:BALH_4741 membrane protein; hypothetical protein	complement(280495..282039)	Alkaliphilus metalliredigens QYMF	5310283
YP_001318133.1	CDS	Amet_0241	NC_009633.1	282058	282546	R	KEGG: bat:BAS5094 hypothetical protein; hypothetical protein	complement(282058..282546)	Alkaliphilus metalliredigens QYMF	5310284
YP_001318134.1	CDS	Amet_0242	NC_009633.1	282958	283149	D	KEGG: dsy:DSY2129 hypothetical protein; hypothetical protein	282958..283149	Alkaliphilus metalliredigens QYMF	5310285
YP_001318135.1	CDS	Amet_0243	NC_009633.1	283240	283728	D	PFAM: plasmid pRiA4b ORF-3 family protein; KEGG: tte:TTE0676 hypothetical protein; plasmid pRiA4b ORF-3 family protein	283240..283728	Alkaliphilus metalliredigens QYMF	5310286
YP_001318136.1	CDS	Amet_0244	NC_009633.1	283721	283990	D	hypothetical protein	283721..283990	Alkaliphilus metalliredigens QYMF	5310287
YP_001318137.1	CDS	Amet_0245	NC_009633.1	284184	284462	D	KEGG: cth:Cthe_0703 hypothetical protein; hypothetical protein	284184..284462	Alkaliphilus metalliredigens QYMF	5310288
YP_001318138.1	CDS	Amet_0246	NC_009633.1	284745	286013	D	hypothetical protein	284745..286013	Alkaliphilus metalliredigens QYMF	5310289
YP_001318139.1	CDS	Amet_0247	NC_009633.1	286228	286686	R	PFAM: CheC domain protein; KEGG: cac:CAC0586 CheX protein (uncharacterized ORF in chemotaxis operon); CheC domain-containing protein	complement(286228..286686)	Alkaliphilus metalliredigens QYMF	5310290
YP_001318140.1	CDS	Amet_0248	NC_009633.1	286677	287543	R	PFAM: response regulator receiver; KEGG: cac:CAC0585 N-terminal CheY reciever domain fused to C-terminal uncharacterized CheX-like domain; response regulator receiver protein	complement(286677..287543)	Alkaliphilus metalliredigens QYMF	5310291
YP_001318141.1	CDS	Amet_0249	NC_009633.1	287778	289841	R	PFAM: histidine kinase, HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: cac:CAC2821 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer	complement(287778..289841)	Alkaliphilus metalliredigens QYMF	5310292
YP_001318142.1	CDS	Amet_0250	NC_009633.1	290395	290745	D	PFAM: microcompartments protein; KEGG: ctc:CTC02181 ethanolamine utilization protein eutS; microcompartments protein	290395..290745	Alkaliphilus metalliredigens QYMF	5310293
YP_001318143.1	CDS	Amet_0251	NC_009633.1	290757	291185	D	TIGRFAM: ethanolamine utilization protein, EutP; KEGG: ctc:CTC02180 ethanolamine utilization protein eutP; ethanolamine utilization protein, EutP	290757..291185	Alkaliphilus metalliredigens QYMF	5310294
YP_001318144.1	CDS	Amet_0252	NC_009633.1	291290	291859	D	PFAM: response regulator receiver; ANTAR domain protein; KEGG: ctc:CTC02179 ethanolamine utilization response regulator; response regulator receiver/ANTAR domain-containing protein	291290..291859	Alkaliphilus metalliredigens QYMF	5310295
YP_001318145.1	CDS	Amet_0253	NC_009633.1	291882	293291	D	PFAM: ATP-binding region, ATPase domain protein; histidine kinase, dimerisation/phosphoacceptor; KEGG: cac:CAC2720 sensory protein containing histidine kinase, PAS anf GAF domains; signal transduction histidine kinase	291882..293291	Alkaliphilus metalliredigens QYMF	5310296
YP_001318146.1	CDS	eutA	NC_009633.1	293398	294831	D	ethanolamine utilization protein EutA; reactivating factor for ethanolamine ammonia lyase	293398..294831	Alkaliphilus metalliredigens QYMF	5310297
YP_001318147.1	CDS	Amet_0255	NC_009633.1	294851	296218	D	PFAM: Ethanolamine ammonia lyase large subunit; KEGG: cpf:CPF_0891 ethanolamine ammonia-lyase, large subunit; ethanolamine ammonia lyase large subunit	294851..296218	Alkaliphilus metalliredigens QYMF	5310298
YP_001318148.1	CDS	Amet_0256	NC_009633.1	296244	297143	D	catalyzes the formation of acetaldehyde from ethanolamine; ethanolamine ammonia-lyase small subunit	296244..297143	Alkaliphilus metalliredigens QYMF	5310299
YP_001318149.1	CDS	Amet_0257	NC_009633.1	297167	297820	D	PFAM: microcompartments protein; KEGG: fnu:FN0081 ethanolamine utilization protein eutL; microcompartments protein	297167..297820	Alkaliphilus metalliredigens QYMF	5310300
YP_001318150.1	CDS	Amet_0258	NC_009633.1	297838	298458	D	PFAM: microcompartments protein; KEGG: lmo:lmo1178 hypothetical protein; microcompartments protein	297838..298458	Alkaliphilus metalliredigens QYMF	5310301
YP_001318151.1	CDS	Amet_0259	NC_009633.1	298459	299910	D	TIGRFAM: acetaldehyde dehydrogenase (acetylating); KEGG: dde:Dde_3279 aldehyde dehydrogenase, putative; acetaldehyde dehydrogenase	298459..299910	Alkaliphilus metalliredigens QYMF	5310302
YP_001318152.1	CDS	Amet_0260	NC_009633.1	299934	300218	D	PFAM: microcompartments protein; KEGG: lwe:lwe1138 propanediol/ethanolamine utilization protein; microcompartments protein	299934..300218	Alkaliphilus metalliredigens QYMF	5310303
YP_001318153.1	CDS	Amet_0261	NC_009633.1	300284	301057	D	PFAM: cobalamin adenosyltransferase; KEGG: ctc:CTC02171 ethanolamine utilization protein; cobalamin adenosyltransferase	300284..301057	Alkaliphilus metalliredigens QYMF	5310304
YP_001318154.1	CDS	Amet_0262	NC_009633.1	301076	301714	D	PFAM: Propanediol utilization protein; KEGG: ssa:SSA_0527 propanediol utilization protein PduL; propanediol utilization protein	301076..301714	Alkaliphilus metalliredigens QYMF	5310305
YP_001318155.1	CDS	Amet_0263	NC_009633.1	301730	302551	D	TIGRFAM: ethanolamine utilization protein EutJ family protein; KEGG: ctc:CTC02168 ethanolamine utilization protein EutJ; ethanolamine utilization protein EutJ family protein	301730..302551	Alkaliphilus metalliredigens QYMF	5310306
YP_001318156.1	CDS	Amet_0264	NC_009633.1	302563	303300	D	KEGG: ctc:CTC02167 putative ethanolamine utilization protein; hypothetical protein	302563..303300	Alkaliphilus metalliredigens QYMF	5310307
YP_001318157.1	CDS	Amet_0265	NC_009633.1	303319	303603	D	PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; KEGG: dde:Dde_3273 ethanolamine utilization protein EutN; ethanolamine utilization protein EutN/carboxysome structural protein Ccml	303319..303603	Alkaliphilus metalliredigens QYMF	5310308
YP_001318158.1	CDS	Amet_0266	NC_009633.1	303615	304961	D	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: lmf:LMOf2365_1149 PduS protein; respiratory-chain NADH dehydrogenase domain-containing protein	303615..304961	Alkaliphilus metalliredigens QYMF	5310309
YP_001318159.1	CDS	Amet_0267	NC_009633.1	304958	305506	D	PFAM: microcompartments protein; KEGG: maq:Maqu_1244 microcompartments protein; microcompartments protein	304958..305506	Alkaliphilus metalliredigens QYMF	5310310
YP_001318160.1	CDS	Amet_0268	NC_009633.1	305531	306634	D	PFAM: Ethanolamine utilisation protein, EutH; KEGG: lin:lin1150 similar to ethanolamine utilization protein EutH - Escherichia coli; ethanolamine utilisation protein, EutH	305531..306634	Alkaliphilus metalliredigens QYMF	5310311
YP_001318161.1	CDS	Amet_0269	NC_009633.1	306753	307928	D	PFAM: iron-containing alcohol dehydrogenase; KEGG: ctc:CTC02182 alcetaldehyde dehydrogenase or NADPH-dependent butanol dehydrogenase; iron-containing alcohol dehydrogenase	306753..307928	Alkaliphilus metalliredigens QYMF	5310312
YP_001318162.1	CDS	Amet_0270	NC_009633.1	308423	308977	D	KEGG: ctc:CTC01854 transcriptional regulator; TetR family transcriptional regulator	308423..308977	Alkaliphilus metalliredigens QYMF	5310313
YP_001318163.1	CDS	Amet_0271	NC_009633.1	309097	310761	D	in group A Streptococci this protein was found to cross react with anti myosin antibodies and may play a role in rheumatic fever; myosin-cross-reactive antigen	309097..310761	Alkaliphilus metalliredigens QYMF	5310314
YP_001318164.1	CDS	Amet_0272	NC_009633.1	310773	311063	D	hypothetical protein	310773..311063	Alkaliphilus metalliredigens QYMF	5310315
YP_001318165.1	CDS	Amet_0273	NC_009633.1	311419	312342	D	hypothetical protein	311419..312342	Alkaliphilus metalliredigens QYMF	5310316
YP_001318166.1	CDS	Amet_0274	NC_009633.1	312330	312653	D	hypothetical protein	312330..312653	Alkaliphilus metalliredigens QYMF	5310317
YP_001318167.1	CDS	Amet_0275	NC_009633.1	312825	312986	D	hypothetical protein	312825..312986	Alkaliphilus metalliredigens QYMF	5310318
YP_001318168.1	CDS	Amet_0276	NC_009633.1	313020	313223	D	hypothetical protein	313020..313223	Alkaliphilus metalliredigens QYMF	5310319
YP_001318169.1	CDS	Amet_0277	NC_009633.1	313292	315139	D	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; CoA-binding domain protein; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: cth:Cthe_2334 polysaccharide biosynthesis protein CapD; polysaccharide biosynthesis protein CapD	313292..315139	Alkaliphilus metalliredigens QYMF	5310320
YP_001318170.1	CDS	Amet_0278	NC_009633.1	315467	315841	D	PFAM: putative small multi-drug export; KEGG: ctc:CTC02518 putative small multi-drug export protein; putative small multi-drug export	315467..315841	Alkaliphilus metalliredigens QYMF	5310321
YP_001318171.1	CDS	Amet_0280	NC_009633.1	316547	316711	D	hypothetical protein	316547..316711	Alkaliphilus metalliredigens QYMF	5310323
YP_001318172.1	CDS	Amet_0281	NC_009633.1	317101	317580	D	hypothetical protein	317101..317580	Alkaliphilus metalliredigens QYMF	5310324
YP_001318173.1	CDS	Amet_0282	NC_009633.1	317649	318815	D	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: dsy:DSY3360 hypothetical protein; RND family efflux transporter MFP subunit	317649..318815	Alkaliphilus metalliredigens QYMF	5310325
YP_001318174.1	CDS	Amet_0283	NC_009633.1	318815	321895	D	PFAM: acriflavin resistance protein; KEGG: swo:Swol_1118 hypothetical protein; acriflavin resistance protein	318815..321895	Alkaliphilus metalliredigens QYMF	5310326
YP_001318175.1	CDS	Amet_0284	NC_009633.1	322249	322836	D	KEGG: cpf:CPF_0240 putative co-chaperone GrpE; hypothetical protein	322249..322836	Alkaliphilus metalliredigens QYMF	5310327
YP_001318176.1	CDS	Amet_0285	NC_009633.1	322833	324542	D	PFAM: Heat shock protein 70; KEGG: cno:NT01CX_1453 DNAk protein; 2-alkenal reductase	322833..324542	Alkaliphilus metalliredigens QYMF	5310328
YP_001318177.1	CDS	Amet_0286	NC_009633.1	324542	325096	D	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: cno:NT01CX_1454 conserved protein, putative; hypothetical protein	324542..325096	Alkaliphilus metalliredigens QYMF	5310329
YP_001318178.1	CDS	Amet_0287	NC_009633.1	325122	326498	D	PFAM: TPR repeat-containing protein; heat shock protein DnaJ domain protein; SEC-C motif domain protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: cno:NT01CX_1455 TPR domain protein; heat shock protein DnaJ domain-containing protein	325122..326498	Alkaliphilus metalliredigens QYMF	5310330
YP_001318179.1	CDS	Amet_0288	NC_009633.1	326809	327459	D	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cac:CAC1506 response regulator (CheY-like receiver domain and a HTH); two component transcriptional regulator	326809..327459	Alkaliphilus metalliredigens QYMF	5310331
YP_001318180.1	CDS	Amet_0289	NC_009633.1	327463	328890	D	PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; KEGG: cac:CAC1507 sensory transduction histidine kinase (with HAMP domain); integral membrane sensor signal transduction histidine kinase	327463..328890	Alkaliphilus metalliredigens QYMF	5310332
YP_001318181.1	CDS	Amet_0290	NC_009633.1	328965	329195	D	KEGG: ptr:461291 splicing factor YT521-B; hypothetical protein	328965..329195	Alkaliphilus metalliredigens QYMF	5310333
YP_001318182.1	CDS	Amet_0291	NC_009633.1	329302	331092	D	hypothetical protein	329302..331092	Alkaliphilus metalliredigens QYMF	5310334
YP_001318183.1	CDS	Amet_0292	NC_009633.1	331125	331505	D	KEGG: ttj:TTHA0227 hypothetical protein; hypothetical protein	331125..331505	Alkaliphilus metalliredigens QYMF	5310335
YP_001318184.1	CDS	Amet_0293	NC_009633.1	331742	333619	D	PFAM: S-layer domain protein; KEGG: swo:Swol_0317 hypothetical protein; S-layer protein	331742..333619	Alkaliphilus metalliredigens QYMF	5310336
YP_001318185.1	CDS	Amet_0294	NC_009633.1	334166	334720	D	KEGG: ctc:CTC01854 transcriptional regulator; TetR family transcriptional regulator	334166..334720	Alkaliphilus metalliredigens QYMF	5310337
YP_001318186.1	CDS	Amet_0295	NC_009633.1	334816	335745	D	TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: cno:NT01CX_1540 UTP-glucose-1-phosphate uridylyltransferase; UTP-glucose-1-phosphate uridylyltransferase	334816..335745	Alkaliphilus metalliredigens QYMF	5310338
YP_001318187.1	CDS	Amet_0296	NC_009633.1	335950	336792	D	PFAM: MotA/TolQ/ExbB proton channel; KEGG: bld:BLi03124 similar to flagellar motor apparatus; RBL03008; MotA/TolQ/ExbB proton channel	335950..336792	Alkaliphilus metalliredigens QYMF	5310339
YP_001318188.1	CDS	Amet_0297	NC_009633.1	336767	337480	D	PFAM: OmpA/MotB domain protein; KEGG: bsu:BG10366 similar to motility protein; OmpA/MotB domain-containing protein	336767..337480	Alkaliphilus metalliredigens QYMF	5310340
YP_001318189.1	CDS	Amet_0298	NC_009633.1	337706	338617	D	PFAM: S-layer domain protein; KEGG: cth:Cthe_2809 glycoside hydrolase, family 16; S-layer protein	337706..338617	Alkaliphilus metalliredigens QYMF	5310341
YP_001318190.1	CDS	Amet_0299	NC_009633.1	338697	339359	D	PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: ter:Tery_4945 TPR repeat; hypothetical protein	338697..339359	Alkaliphilus metalliredigens QYMF	5310342
YP_001318191.1	CDS	Amet_0300	NC_009633.1	339512	339778	D	KEGG: cch:Cag_0270 hypothetical protein; hypothetical protein	339512..339778	Alkaliphilus metalliredigens QYMF	5310343
YP_001318192.1	CDS	Amet_0301	NC_009633.1	339792	340037	D	KEGG: cch:Cag_0271 hypothetical protein; hypothetical protein	339792..340037	Alkaliphilus metalliredigens QYMF	5310344
YP_001318193.1	CDS	Amet_0302	NC_009633.1	340273	341262	D	TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: tte:TTE1927 UDP-glucose 4-epimerase; UDP-glucose 4-epimerase	340273..341262	Alkaliphilus metalliredigens QYMF	5310345
YP_001318194.1	CDS	Amet_0303	NC_009633.1	341368	342798	D	KEGG: mta:Moth_0665 hypothetical protein; hypothetical protein	341368..342798	Alkaliphilus metalliredigens QYMF	5310346
YP_001318195.1	CDS	Amet_0304	NC_009633.1	342808	344016	R	PFAM: transposase, IS4 family protein; KEGG: sak:SAK_2050 IS10R, transposase; transposase, IS4 family protein	complement(342808..344016)	Alkaliphilus metalliredigens QYMF	5310347
YP_001318196.1	CDS	Amet_0306	NC_009633.1	344236	345126	D	PFAM: glycosyl transferase, family 2; KEGG: baa:BA_0542 glycosyl transferase; glycosyl transferase family protein	344236..345126	Alkaliphilus metalliredigens QYMF	5310349
YP_001318197.1	CDS	Amet_0307	NC_009633.1	345154	345573	D	PFAM: GtrA family protein; KEGG: lmf:LMOf2365_2522 cell wall teichoic acid glycosylation protein GtcA; GtrA family protein	345154..345573	Alkaliphilus metalliredigens QYMF	5310350
YP_001318198.1	CDS	Amet_0308	NC_009633.1	345761	346507	D	KEGG: cth:Cthe_0240 hypothetical protein; hypothetical protein	345761..346507	Alkaliphilus metalliredigens QYMF	5310351
YP_001318199.1	CDS	Amet_0309	NC_009633.1	346519	347214	D	KEGG: cth:Cthe_0730 hypothetical protein; hypothetical protein	346519..347214	Alkaliphilus metalliredigens QYMF	5310352
YP_001318200.1	CDS	Amet_0310	NC_009633.1	347310	349040	D	PFAM: Spore coat protein CotH; KEGG: bsu:BG11791 spore coat protein (inner); spore coat protein CotH	347310..349040	Alkaliphilus metalliredigens QYMF	5310353
YP_001318201.1	CDS	Amet_0311	NC_009633.1	349102	350175	D	PFAM: acyltransferase 3; KEGG: mma:MM2212 hypothetical protein; acyltransferase 3	349102..350175	Alkaliphilus metalliredigens QYMF	5310354
YP_001318202.1	CDS	Amet_0312	NC_009633.1	350536	351690	D	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: dsy:DSY3360 hypothetical protein; RND family efflux transporter MFP subunit	350536..351690	Alkaliphilus metalliredigens QYMF	5310355
YP_001318203.1	CDS	Amet_0314	NC_009633.1	353145	353717	D	PFAM: regulatory protein, TetR; KEGG: dsy:DSY3361 hypothetical protein; TetR family transcriptional regulator	353145..353717	Alkaliphilus metalliredigens QYMF	5310357
YP_001318204.1	CDS	Amet_0315	NC_009633.1	353786	355141	R	PFAM: sodium:neurotransmitter symporter; KEGG: cvi:CV1670 probable sodium/chloride ion channel; sodium:neurotransmitter symporter	complement(353786..355141)	Alkaliphilus metalliredigens QYMF	5310358
YP_001318205.1	CDS	Amet_0316	NC_009633.1	355486	355848	D	PFAM: response regulator receiver; KEGG: dsy:DSY4941 hypothetical protein; response regulator receiver protein	355486..355848	Alkaliphilus metalliredigens QYMF	5310359
YP_001318206.1	CDS	Amet_0317	NC_009633.1	355968	356357	D	KEGG: tte:TTE0718 acyl-CoA hydrolase; acyl-CoA hydrolase	355968..356357	Alkaliphilus metalliredigens QYMF	5310360
YP_001318207.1	CDS	Amet_0318	NC_009633.1	356371	357183	D	PFAM: protein of unknown function DUF849; KEGG: rfr:Rfer_3885 protein of unknown function DUF849; hypothetical protein	356371..357183	Alkaliphilus metalliredigens QYMF	5310361
YP_001318208.1	CDS	Amet_0319	NC_009633.1	357195	357839	D	TIGRFAM: putative transaldolase; PFAM: Transaldolase; KEGG: bce:BC0665 transaldolase; putative transaldolase	357195..357839	Alkaliphilus metalliredigens QYMF	5310362
YP_001318209.1	CDS	Amet_0320	NC_009633.1	357933	358751	D	PFAM: alpha/beta hydrolase fold; KEGG: tte:TTE0552 predicted hydrolase or acyltransferase (alpha/beta hydrolase superfamily); alpha/beta hydrolase fold protein	357933..358751	Alkaliphilus metalliredigens QYMF	5310363
YP_001318210.1	CDS	glpX	NC_009633.1	359244	360242	D	type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II	359244..360242	Alkaliphilus metalliredigens QYMF	5310364
YP_001318211.1	CDS	glpX	NC_009633.1	360274	361242	D	type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II	360274..361242	Alkaliphilus metalliredigens QYMF	5310365
YP_001318212.1	CDS	rho	NC_009633.1	361368	362801	D	An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho	361368..362801	Alkaliphilus metalliredigens QYMF	5310366
YP_001318213.1	CDS	rpmE	NC_009633.1	362910	363107	D	RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31	362910..363107	Alkaliphilus metalliredigens QYMF	5310367
YP_001318214.1	CDS	Amet_0325	NC_009633.1	363205	363792	D	PFAM: thymidine kinase; KEGG: tte:TTE0140 Thymidine kinase; thymidine kinase	363205..363792	Alkaliphilus metalliredigens QYMF	5310368
YP_001318215.1	CDS	Amet_0326	NC_009633.1	364403	365224	D	PFAM: regulatory protein, MerR; KEGG: pca:Pcar_2183 predicted transcriptional regulator; MerR family transcriptional regulator	364403..365224	Alkaliphilus metalliredigens QYMF	5310369
YP_001318216.1	CDS	Amet_0327	NC_009633.1	365325	367259	D	TIGRFAM: flavocytochrome c; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; FMN-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ser:SERP2381 NADH:flavin oxidoreductase/fumarate reductase, flavoprotein subunit, putative; flavocytochrome c	365325..367259	Alkaliphilus metalliredigens QYMF	5310370
YP_001318217.1	CDS	Amet_0328	NC_009633.1	367824	368051	D	hypothetical protein	367824..368051	Alkaliphilus metalliredigens QYMF	5310371
YP_001318218.1	CDS	Amet_0329	NC_009633.1	368239	369639	D	hypothetical protein	368239..369639	Alkaliphilus metalliredigens QYMF	5310372
YP_001318219.1	CDS	Amet_0330	NC_009633.1	369672	370553	D	TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; KEGG: cth:Cthe_2428 modification methylase, HemK family; HemK family modification methylase	369672..370553	Alkaliphilus metalliredigens QYMF	5310373
YP_001318220.1	CDS	prfA	NC_009633.1	370654	371727	D	recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1	370654..371727	Alkaliphilus metalliredigens QYMF	5310374
YP_001318221.1	CDS	Amet_0332	NC_009633.1	371953	372618	D	PFAM: zinc/iron permease; KEGG: tte:TTE0144 predicted divalent heavy-metal cations transporter; zinc/iron permease	371953..372618	Alkaliphilus metalliredigens QYMF	5310375
YP_001318222.1	CDS	Amet_0333	NC_009633.1	372719	373171	D	PFAM: Forkhead-associated protein; KEGG: cth:Cthe_3045 FHA domain containing protein; FHA domain-containing protein	372719..373171	Alkaliphilus metalliredigens QYMF	5310376
YP_001318223.1	CDS	Amet_0334	NC_009633.1	373176	374390	D	PFAM: cell cycle protein; KEGG: cth:Cthe_3046 cell cycle protein; cell cycle protein	373176..374390	Alkaliphilus metalliredigens QYMF	5310377
YP_001318224.1	CDS	Amet_0335	NC_009633.1	374377	375777	D	PFAM: penicillin-binding protein, transpeptidase; KEGG: cth:Cthe_3047 peptidoglycan glycosyltransferase; peptidoglycan glycosyltransferase	374377..375777	Alkaliphilus metalliredigens QYMF	5310378
YP_001318225.1	CDS	Amet_0336	NC_009633.1	375780	376850	D	TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5 domain protein; SUA5/yciO/yrdC, N-terminal domain; KEGG: tte:TTE0145 putative translation factor (SUA5); Sua5/YciO/YrdC/YwlC family protein	375780..376850	Alkaliphilus metalliredigens QYMF	5310379
YP_001318226.1	CDS	Amet_0337	NC_009633.1	376869	377348	D	PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: chy:CHY_2559 low molecular weight protein-tyrosine-phosphatase; protein tyrosine phosphatase	376869..377348	Alkaliphilus metalliredigens QYMF	5310380
YP_001318227.1	CDS	Amet_0338	NC_009633.1	377459	377908	D	TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase; KEGG: cpr:CPR_2173 ribose 5-phosphate isomerase B; RpiB/LacA/LacB family sugar-phosphate isomerase	377459..377908	Alkaliphilus metalliredigens QYMF	5310381
YP_001318228.1	CDS	upp	NC_009633.1	377924	378553	D	Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase	377924..378553	Alkaliphilus metalliredigens QYMF	5310382
YP_001318229.1	CDS	Amet_0340	NC_009633.1	378757	379197	D	PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: cth:Cthe_2599 CMP/dCMP deaminase, zinc-binding; CMP/dCMP deaminase	378757..379197	Alkaliphilus metalliredigens QYMF	5310383
YP_001318230.1	CDS	Amet_0341	NC_009633.1	379281	380321	D	PFAM: glycosyl transferase, family 4; KEGG: tte:TTE0154 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase; glycosyl transferase family protein	379281..380321	Alkaliphilus metalliredigens QYMF	5310384
YP_001318231.1	CDS	Amet_0342	NC_009633.1	380538	381953	R	PFAM: sodium:neurotransmitter symporter; KEGG: vfi:VF1605 putative neurotransmitter:Na+ symporter, NSS family; sodium:neurotransmitter symporter	complement(380538..381953)	Alkaliphilus metalliredigens QYMF	5310385
YP_001318232.1	CDS	Amet_0343	NC_009633.1	382412	383545	D	PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: ctc:CTC00311 UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase	382412..383545	Alkaliphilus metalliredigens QYMF	5310386
YP_001318233.1	CDS	Amet_0344	NC_009633.1	383912	384139	D	KEGG: gme:Gmet_3357 hypothetical protein; hypothetical protein	383912..384139	Alkaliphilus metalliredigens QYMF	5310387
YP_001318234.1	CDS	Amet_0345	NC_009633.1	384144	384590	D	KEGG: gsu:GSU0335 hypothetical protein; hypothetical protein	384144..384590	Alkaliphilus metalliredigens QYMF	5310388
YP_001318235.1	CDS	Amet_0346	NC_009633.1	384556	385254	D	TIGRFAM: ATP synthase F0, A subunit; PFAM: H+-transporting two-sector ATPase, A subunit; KEGG: cpf:CPF_2458 ATP synthase F0, A subunit; ATP synthase F0 subunit A	384556..385254	Alkaliphilus metalliredigens QYMF	5310389
YP_001318236.1	CDS	Amet_0347	NC_009633.1	385338	385892	D	TIGRFAM: ATP synthase F0, C subunit; PFAM: H+-transporting two-sector ATPase, C subunit; KEGG: fnu:FN0363 ATP synthase C chain, sodium ion specific; ATP synthase F0 subunit C	385338..385892	Alkaliphilus metalliredigens QYMF	5310390
YP_001318237.1	CDS	Amet_0348	NC_009633.1	385990	386256	D	produces ATP from ADP in the presence of a proton gradient across the membrane; subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C	385990..386256	Alkaliphilus metalliredigens QYMF	5310391
YP_001318238.1	CDS	Amet_0349	NC_009633.1	386324	386830	D	TIGRFAM: ATP synthase F0, B subunit; PFAM: H+-transporting two-sector ATPase, B/B' subunit; KEGG: tte:TTE0633 F0F1-type ATP synthase b subunit; ATP synthase F0 subunit B	386324..386830	Alkaliphilus metalliredigens QYMF	5310392
YP_001318239.1	CDS	Amet_0350	NC_009633.1	386818	387360	D	TIGRFAM: ATP synthase F1, delta subunit; PFAM: H+-transporting two-sector ATPase, delta (OSCP) subunit; KEGG: dsy:DSY4915 ATP synthase F1 delta subunit; ATP synthase F1 subunit delta	386818..387360	Alkaliphilus metalliredigens QYMF	5310393
YP_001318240.1	CDS	Amet_0351	NC_009633.1	387378	388895	D	produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha	387378..388895	Alkaliphilus metalliredigens QYMF	5310394
YP_001318241.1	CDS	Amet_0352	NC_009633.1	388933	389802	D	TIGRFAM: ATP synthase F1, gamma subunit; PFAM: H+-transporting two-sector ATPase, gamma subunit; KEGG: chy:CHY_2546 ATP synthase F1, gamma subunit; ATP synthase F1 subunit gamma	388933..389802	Alkaliphilus metalliredigens QYMF	5310395
YP_001318242.1	CDS	Amet_0353	NC_009633.1	389821	391215	D	Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta	389821..391215	Alkaliphilus metalliredigens QYMF	5310396
YP_001318243.1	CDS	Amet_0354	NC_009633.1	391225	391629	D	TIGRFAM: ATP synthase F1, epsilon subunit; PFAM: H+-transporting two-sector ATPase, delta/epsilon subunit; KEGG: tte:TTE0638 F0F1-type ATP synthase epsilon subunit (mitochondrial delta subunit); ATP synthase F1 subunit epsilon	391225..391629	Alkaliphilus metalliredigens QYMF	5310397
YP_001318244.1	CDS	Amet_0355	NC_009633.1	391786	392205	R	KEGG: dsy:DSY0901 hypothetical protein; hypothetical protein	complement(391786..392205)	Alkaliphilus metalliredigens QYMF	5310398
YP_001318245.1	CDS	Amet_0356	NC_009633.1	392531	393082	D	PFAM: protein of unknown function DUF1694; KEGG: dsy:DSY3042 hypothetical protein; hypothetical protein	392531..393082	Alkaliphilus metalliredigens QYMF	5310399
YP_001318246.1	CDS	Amet_0357	NC_009633.1	393304	394143	D	KEGG: tte:TTE0157 hypothetical protein; hypothetical protein	393304..394143	Alkaliphilus metalliredigens QYMF	5310400
YP_001318247.1	CDS	Amet_0358	NC_009633.1	394175	395428	D	adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase	394175..395428	Alkaliphilus metalliredigens QYMF	5310401
YP_001318248.1	CDS	Amet_0359	NC_009633.1	395535	396539	D	TIGRFAM: SpoIID/LytB domain protein; Sporulation stage II, protein D firmicutes; PFAM: Stage II sporulation D domain protein; KEGG: cth:Cthe_2616 SpoIID/LytB domain protein containing protein; sporulation stage II protein D	395535..396539	Alkaliphilus metalliredigens QYMF	5310402
YP_001318249.1	CDS	Amet_0360	NC_009633.1	396661	397545	D	PFAM: peptidase M23B; KEGG: cth:Cthe_2617 peptidase M23B; peptidase M23B	396661..397545	Alkaliphilus metalliredigens QYMF	5310403
YP_001318250.1	CDS	Amet_0361	NC_009633.1	397788	398372	D	PFAM: regulatory protein, TetR; KEGG: son:SO3684 transcriptional regulator, TetR family; TetR family transcriptional regulator	397788..398372	Alkaliphilus metalliredigens QYMF	5310404
YP_001318251.1	CDS	Amet_0362	NC_009633.1	398445	399605	D	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: dsy:DSY3360 hypothetical protein; RND family efflux transporter MFP subunit	398445..399605	Alkaliphilus metalliredigens QYMF	5310405
YP_001318252.1	CDS	Amet_0363	NC_009633.1	399602	402673	D	PFAM: acriflavin resistance protein; KEGG: swo:Swol_1118 hypothetical protein; acriflavin resistance protein	399602..402673	Alkaliphilus metalliredigens QYMF	5310406
YP_001318253.1	CDS	Amet_0364	NC_009633.1	402814	403077	D	TIGRFAM: Sporulation stage III, transcriptional regulator SpoIIID; KEGG: cno:NT01CX_0524 stage III sporulation protein D; sporulation stage III, transcriptional regulator SpoIIID	402814..403077	Alkaliphilus metalliredigens QYMF	5310407
YP_001318254.1	CDS	Amet_0365	NC_009633.1	403426	404451	D	TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell division protein FtsA; cell shape determining protein MreB/Mrl; KEGG: cth:Cthe_2619 cell shape determining protein, MreB/Mrl family; rod shape-determining protein Mbl	403426..404451	Alkaliphilus metalliredigens QYMF	5310408
YP_001318255.1	CDS	Amet_0366	NC_009633.1	404654	405361	D	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: swo:Swol_0941 ATP binding protein of ABC transporter; ABC transporter-like protein	404654..405361	Alkaliphilus metalliredigens QYMF	5310409
YP_001318256.1	CDS	Amet_0367	NC_009633.1	405365	407389	D	KEGG: cth:Cthe_3171 S-layer domain-like protein; S-layer protein	405365..407389	Alkaliphilus metalliredigens QYMF	5310410
YP_001318257.1	CDS	Amet_0368	NC_009633.1	407382	408731	D	PFAM: protein of unknown function DUF214; KEGG: swo:Swol_0943 ABC transporter component-like protein; hypothetical protein	407382..408731	Alkaliphilus metalliredigens QYMF	5310411
YP_001318258.1	CDS	Amet_0369	NC_009633.1	408878	409969	D	PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: tte:TTE0172 Flagellar basal body and hook proteins; flagellar basal body rod protein	408878..409969	Alkaliphilus metalliredigens QYMF	5310412
YP_001318259.1	CDS	Amet_0370	NC_009633.1	410019	410813	D	PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: tte:TTE0173 Flagellar basal body and hook proteins; hypothetical protein	410019..410813	Alkaliphilus metalliredigens QYMF	5310413
YP_001318260.1	CDS	Amet_0371	NC_009633.1	410844	411215	D	KEGG: dps:DP2685 similar to flagellar muramidase protein (FlgJ); rod binding protein-like protein	410844..411215	Alkaliphilus metalliredigens QYMF	5310414
YP_001318261.1	CDS	fabZ	NC_009633.1	411234	411677	D	in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase	411234..411677	Alkaliphilus metalliredigens QYMF	5310415
YP_001318262.1	CDS	Amet_0373	NC_009633.1	411885	412724	D	PFAM: protein of unknown function DUF1568; KEGG: swo:Swol_0164 transposase and inactivated derivatives-like protein; hypothetical protein	411885..412724	Alkaliphilus metalliredigens QYMF	5310416
YP_001318263.1	CDS	Amet_0374	NC_009633.1	412896	413783	D	PFAM: protein of unknown function DUF368; KEGG: oih:OB0592 hypothetical protein; hypothetical protein	412896..413783	Alkaliphilus metalliredigens QYMF	5310417
YP_001318264.1	CDS	Amet_0375	NC_009633.1	413899	414822	D	TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: cpr:CPR_0469 UTP-glucose-1-phosphate uridylyltransferase; UTP-glucose-1-phosphate uridylyltransferase	413899..414822	Alkaliphilus metalliredigens QYMF	5310418
YP_001318265.1	CDS	Amet_0377	NC_009633.1	415537	415785	D	TIGRFAM: prevent-host-death family protein; KEGG: chy:CHY_2512 prevent-host-death family protein; prevent-host-death family protein	415537..415785	Alkaliphilus metalliredigens QYMF	5310420
YP_001318266.1	CDS	Amet_0378	NC_009633.1	415790	416116	D	TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; KEGG: dsy:DSY2129 hypothetical protein; addiction module antitoxin	415790..416116	Alkaliphilus metalliredigens QYMF	5310421
YP_001318267.1	CDS	Amet_0379	NC_009633.1	416849	417502	D	hypothetical protein	416849..417502	Alkaliphilus metalliredigens QYMF	5310422
YP_001318268.1	CDS	Amet_0380	NC_009633.1	417588	417758	D	hypothetical protein	417588..417758	Alkaliphilus metalliredigens QYMF	5310423
YP_001318269.1	CDS	Amet_0381	NC_009633.1	417816	418511	D	PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: cac:CAC2546 transcriptional regulator, FadR family; GntR family transcriptional regulator	417816..418511	Alkaliphilus metalliredigens QYMF	5310424
YP_001318270.1	CDS	Amet_0383	NC_009633.1	419542	420306	R	PFAM: helix-turn-helix domain protein; bacteriophage CI repressor; KEGG: ecv:APECO1_376 putative repressor protein encoded within prophage CP-933O; XRE family plasmid maintenance system antidote protein	complement(419542..420306)	Alkaliphilus metalliredigens QYMF	5310426
YP_001318271.1	CDS	Amet_0384	NC_009633.1	420608	420793	D	hypothetical protein	420608..420793	Alkaliphilus metalliredigens QYMF	5310427
YP_001318272.1	CDS	Amet_0385	NC_009633.1	421139	421345	D	hypothetical protein	421139..421345	Alkaliphilus metalliredigens QYMF	5310428
YP_001318273.1	CDS	Amet_0386	NC_009633.1	421320	421790	D	hypothetical protein	421320..421790	Alkaliphilus metalliredigens QYMF	5310429
YP_001318274.1	CDS	Amet_0387	NC_009633.1	421815	422039	D	KEGG: tte:TTE2173 hypothetical protein; hypothetical protein	421815..422039	Alkaliphilus metalliredigens QYMF	5310430
YP_001318275.1	CDS	Amet_0388	NC_009633.1	422198	424255	D	PFAM: Transposase-like, Mu-like; KEGG: bcz:pE33L466_0072 transposase; transposase	422198..424255	Alkaliphilus metalliredigens QYMF	5310431
YP_001318276.1	CDS	Amet_0389	NC_009633.1	424271	425194	D	KEGG: cjr:CJE0269 bacteriophage DNA transposition protein B, putative; hypothetical protein	424271..425194	Alkaliphilus metalliredigens QYMF	5310432
YP_001318277.1	CDS	Amet_0390	NC_009633.1	425194	425448	D	hypothetical protein	425194..425448	Alkaliphilus metalliredigens QYMF	5310433
YP_001318278.1	CDS	Amet_0391	NC_009633.1	425450	425677	D	hypothetical protein	425450..425677	Alkaliphilus metalliredigens QYMF	5310434
YP_001318279.1	CDS	Amet_0392	NC_009633.1	425655	426410	D	hypothetical protein	425655..426410	Alkaliphilus metalliredigens QYMF	5310435
YP_001318280.1	CDS	Amet_0393	NC_009633.1	426394	426651	D	PFAM: SpoVT/AbrB domain protein; KEGG: swo:Swol_0047 transcription regulator AbrB; transcriptional regulator/antitoxin MazE	426394..426651	Alkaliphilus metalliredigens QYMF	5310436
YP_001318281.1	CDS	Amet_0394	NC_009633.1	426644	427297	D	hypothetical protein	426644..427297	Alkaliphilus metalliredigens QYMF	5310437
YP_001318282.1	CDS	Amet_0395	NC_009633.1	427347	427775	D	hypothetical protein	427347..427775	Alkaliphilus metalliredigens QYMF	5310438
YP_001318283.1	CDS	Amet_0396	NC_009633.1	427768	427992	D	hypothetical protein	427768..427992	Alkaliphilus metalliredigens QYMF	5310439
YP_001318284.1	CDS	Amet_0397	NC_009633.1	428063	428224	D	hypothetical protein	428063..428224	Alkaliphilus metalliredigens QYMF	5310440
YP_001318285.1	CDS	Amet_0398	NC_009633.1	428229	428885	D	TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; KEGG: cpr:CPR_1733 RNA polymerase sigma-E factor; FliA/WhiG family RNA polymerase sigma factor	428229..428885	Alkaliphilus metalliredigens QYMF	5310441
YP_001318286.1	CDS	Amet_0399	NC_009633.1	428892	429293	D	KEGG: pol:Bpro_3769 hypothetical protein; hypothetical protein	428892..429293	Alkaliphilus metalliredigens QYMF	5310442
YP_001318287.1	CDS	Amet_0400	NC_009633.1	429587	429898	D	hypothetical protein	429587..429898	Alkaliphilus metalliredigens QYMF	5310443
YP_001318288.1	CDS	Amet_0401	NC_009633.1	429942	430280	D	hypothetical protein	429942..430280	Alkaliphilus metalliredigens QYMF	5310444
YP_001318289.1	CDS	Amet_0402	NC_009633.1	430311	430532	D	hypothetical protein	430311..430532	Alkaliphilus metalliredigens QYMF	5310445
YP_001318290.1	CDS	Amet_0403	NC_009633.1	430558	430683	D	hypothetical protein	430558..430683	Alkaliphilus metalliredigens QYMF	5310446
YP_001318291.1	CDS	Amet_0404	NC_009633.1	430684	430920	D	hypothetical protein	430684..430920	Alkaliphilus metalliredigens QYMF	5310447
YP_001318292.1	CDS	Amet_0405	NC_009633.1	430939	431118	D	hypothetical protein	430939..431118	Alkaliphilus metalliredigens QYMF	5310448
YP_001318293.1	CDS	Amet_0406	NC_009633.1	431161	431637	D	PFAM: 3D domain protein; KEGG: bsu:BG13521 similar to cell wall-binding protein; hypothetical protein	431161..431637	Alkaliphilus metalliredigens QYMF	5310449
YP_001318294.1	CDS	Amet_0407	NC_009633.1	431667	432377	D	KEGG: ssa:SSA_0424 exopolysaccharide biosynthesis protein, putative; related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase-like protein; exopolysaccharide biosynthesis protein	431667..432377	Alkaliphilus metalliredigens QYMF	5310450
YP_001318295.1	CDS	Amet_0408	NC_009633.1	432497	433174	D	PFAM: cell wall hydrolase/autolysin; KEGG: bld:BLi01974 N-acetylmuramoyl-L-alanine amidase cwlL precursor (Cell wall hydrolase) (Autolysin); RBL04154; cell wall hydrolase/autolysin	432497..433174	Alkaliphilus metalliredigens QYMF	5310451
YP_001318296.1	CDS	Amet_0409	NC_009633.1	433228	433542	D	hypothetical protein	433228..433542	Alkaliphilus metalliredigens QYMF	5310452
YP_001318297.1	CDS	Amet_0410	NC_009633.1	433653	434192	D	hypothetical protein	433653..434192	Alkaliphilus metalliredigens QYMF	5310453
YP_001318298.1	CDS	Amet_0411	NC_009633.1	434194	434487	D	hypothetical protein	434194..434487	Alkaliphilus metalliredigens QYMF	5310454
YP_001318299.1	CDS	Amet_0412	NC_009633.1	434489	434782	D	hypothetical protein	434489..434782	Alkaliphilus metalliredigens QYMF	5310455
YP_001318300.1	CDS	Amet_0413	NC_009633.1	434782	435348	D	KEGG: mfa:Mfla_2702 hypothetical protein; hypothetical protein	434782..435348	Alkaliphilus metalliredigens QYMF	5310456
YP_001318301.1	CDS	Amet_0414	NC_009633.1	435362	435850	D	PFAM: transcription antitermination protein NusG; SMART: NGN domain protein; KEGG: tte:TTE0730 Transcription antiterminator; NusG antitermination factor	435362..435850	Alkaliphilus metalliredigens QYMF	5310457
YP_001318302.1	CDS	Amet_0415	NC_009633.1	436107	437564	D	TIGRFAM: phage uncharacterized protein; KEGG: bha:BH3533 hypothetical protein; phage protein	436107..437564	Alkaliphilus metalliredigens QYMF	5310458
YP_001318303.1	CDS	Amet_0416	NC_009633.1	437582	438931	D	TIGRFAM: phage-associated protein, HI1409 family; KEGG: efa:EF1456 conserved hypothetical protein TIGR01555; phage-associated protein	437582..438931	Alkaliphilus metalliredigens QYMF	5310459
YP_001318304.1	CDS	Amet_0417	NC_009633.1	438924	439706	D	TIGRFAM: phage putative head morphogenesis protein, SPP1 gp7 family; PFAM: phage putative head morphogenesis protein, SPP1 gp7; KEGG: efa:EF1457 minor head protein; SPP1 family phage head morphogenesis protein	438924..439706	Alkaliphilus metalliredigens QYMF	5310460
YP_001318305.1	CDS	Amet_0418	NC_009633.1	439720	440823	D	KEGG: lin:lin1728 hypothetical protein; hypothetical protein	439720..440823	Alkaliphilus metalliredigens QYMF	5310461
YP_001318306.1	CDS	Amet_0419	NC_009633.1	440839	441339	D	KEGG: efa:EF1462 hypothetical protein; hypothetical protein	440839..441339	Alkaliphilus metalliredigens QYMF	5310462
YP_001318307.1	CDS	Amet_0420	NC_009633.1	441362	442276	D	KEGG: lin:lin1726 hypothetical protein; hypothetical protein	441362..442276	Alkaliphilus metalliredigens QYMF	5310463
YP_001318308.1	CDS	Amet_0421	NC_009633.1	442292	442624	D	hypothetical protein	442292..442624	Alkaliphilus metalliredigens QYMF	5310464
YP_001318309.1	CDS	Amet_0422	NC_009633.1	442627	442959	D	KEGG: lin:lin1724 hypothetical protein; hypothetical protein	442627..442959	Alkaliphilus metalliredigens QYMF	5310465
YP_001318310.1	CDS	Amet_0423	NC_009633.1	442972	443574	D	KEGG: lin:lin1723 hypothetical protein; hypothetical protein	442972..443574	Alkaliphilus metalliredigens QYMF	5310466
YP_001318311.1	CDS	Amet_0424	NC_009633.1	443571	443933	D	hypothetical protein	443571..443933	Alkaliphilus metalliredigens QYMF	5310467
YP_001318312.1	CDS	Amet_0425	NC_009633.1	443930	444436	D	hypothetical protein	443930..444436	Alkaliphilus metalliredigens QYMF	5310468
YP_001318313.1	CDS	Amet_0426	NC_009633.1	444448	445452	D	KEGG: efa:EF1469 hypothetical protein; hypothetical protein	444448..445452	Alkaliphilus metalliredigens QYMF	5310469
YP_001318314.1	CDS	Amet_0427	NC_009633.1	445464	445868	D	KEGG: hit:NTHI1539 hypothetical protein; hypothetical protein	445464..445868	Alkaliphilus metalliredigens QYMF	5310470
YP_001318315.1	CDS	Amet_0428	NC_009633.1	445924	446178	D	hypothetical protein	445924..446178	Alkaliphilus metalliredigens QYMF	5310471
YP_001318316.1	CDS	Amet_0429	NC_009633.1	446239	446562	D	hypothetical protein	446239..446562	Alkaliphilus metalliredigens QYMF	5310472
YP_001318317.1	CDS	Amet_0430	NC_009633.1	446671	448428	D	TIGRFAM: phage tail tape measure protein, TP901 family; KEGG: bld:BLi01480 hypothetical protein; TP901 family phage tail tape measure protein	446671..448428	Alkaliphilus metalliredigens QYMF	5310473
YP_001318318.1	CDS	Amet_0431	NC_009633.1	448441	449031	D	KEGG: lin:lin1715 hypothetical protein; hypothetical protein	448441..449031	Alkaliphilus metalliredigens QYMF	5310474
YP_001318319.1	CDS	Amet_0432	NC_009633.1	449028	449357	D	KEGG: efa:EF1475 hypothetical protein; hypothetical protein	449028..449357	Alkaliphilus metalliredigens QYMF	5310475
YP_001318320.1	CDS	Amet_0433	NC_009633.1	449344	450120	D	KEGG: lin:lin1713 hypothetical protein; hypothetical protein	449344..450120	Alkaliphilus metalliredigens QYMF	5310476
YP_001318321.1	CDS	Amet_0434	NC_009633.1	450117	450413	D	hypothetical protein	450117..450413	Alkaliphilus metalliredigens QYMF	5310477
YP_001318322.1	CDS	Amet_0435	NC_009633.1	450413	450775	D	KEGG: efa:EF1478 hypothetical protein; hypothetical protein	450413..450775	Alkaliphilus metalliredigens QYMF	5310478
YP_001318323.1	CDS	Amet_0436	NC_009633.1	450768	451955	D	KEGG: efa:EF1479 hypothetical protein; hypothetical protein	450768..451955	Alkaliphilus metalliredigens QYMF	5310479
YP_001318324.1	CDS	Amet_0437	NC_009633.1	451948	452577	D	KEGG: lin:lin1709 hypothetical protein; hypothetical protein	451948..452577	Alkaliphilus metalliredigens QYMF	5310480
YP_001318325.1	CDS	Amet_0438	NC_009633.1	452588	453157	D	KEGG: lin:lin1708 hypothetical protein; hypothetical protein	452588..453157	Alkaliphilus metalliredigens QYMF	5310481
YP_001318326.1	CDS	Amet_0439	NC_009633.1	453159	453407	D	hypothetical protein	453159..453407	Alkaliphilus metalliredigens QYMF	5310482
YP_001318327.1	CDS	Amet_0440	NC_009633.1	453400	453534	D	hypothetical protein	453400..453534	Alkaliphilus metalliredigens QYMF	5310483
YP_001318328.1	CDS	Amet_0441	NC_009633.1	453984	454983	D	PFAM: phage integrase domain protein SAM domain protein; KEGG: dsy:DSY2171 hypothetical protein; phage integrase domain/SAM domain-containing protein	join(453984..454529,454531..454983)	Alkaliphilus metalliredigens QYMF	5310484
YP_001318329.1	CDS	Amet_0442	NC_009633.1	455152	455811	D	PFAM: Electron transfer flavoprotein, alpha/beta-subunit-like; KEGG: ctc:CTC02083 electron transfer flavoprotein beta-subunit; electron transfer flavoprotein subunit alpha/beta-like protein	455152..455811	Alkaliphilus metalliredigens QYMF	5310485
YP_001318330.1	CDS	Amet_0443	NC_009633.1	455820	456809	D	PFAM: Electron transfer flavoprotein, alpha/beta-subunit-like; Electron transfer flavoprotein, alpha subunit-like; KEGG: tte:TTE0547 Electron transfer flavoprotein alpha-subunit; electron transfer flavoprotein subunit alpha-like protein	455820..456809	Alkaliphilus metalliredigens QYMF	5310486
YP_001318331.1	CDS	Amet_0444	NC_009633.1	456935	458086	D	KEGG: pho:PH0137 hypothetical protein; hypothetical protein	456935..458086	Alkaliphilus metalliredigens QYMF	5310487
YP_001318332.1	CDS	Amet_0445	NC_009633.1	458180	459562	D	PFAM: FAD linked oxidase domain protein; KEGG: afu:AF0394 D-lactate dehydrogenase, cytochrome-type (dld); FAD linked oxidase domain-containing protein	458180..459562	Alkaliphilus metalliredigens QYMF	5310488
YP_001318333.1	CDS	Amet_0446	NC_009633.1	460101	460343	D	hypothetical protein	460101..460343	Alkaliphilus metalliredigens QYMF	5310489
YP_001318334.1	CDS	Amet_0447	NC_009633.1	460346	460570	D	hypothetical protein	460346..460570	Alkaliphilus metalliredigens QYMF	5310490
YP_001318335.1	CDS	Amet_0448	NC_009633.1	460571	460687	D	hypothetical protein	460571..460687	Alkaliphilus metalliredigens QYMF	5310491
YP_001318336.1	CDS	Amet_0449	NC_009633.1	460892	462766	D	PFAM: transposase, IS4 family protein; KEGG: tte:TTE2604 transposase; transposase, IS4 family protein	460892..462766	Alkaliphilus metalliredigens QYMF	5310492
YP_001318337.1	CDS	Amet_0450	NC_009633.1	462812	462949	D	hypothetical protein	462812..462949	Alkaliphilus metalliredigens QYMF	5310493
YP_001318338.1	CDS	Amet_0451	NC_009633.1	463002	463400	D	KEGG: cth:Cthe_2665 Zn-finger containing protein; Zn-finger containing protein	463002..463400	Alkaliphilus metalliredigens QYMF	5310494
YP_001318339.1	CDS	Amet_0452	NC_009633.1	463450	464220	D	PFAM: heat shock protein DnaJ domain protein; KEGG: gka:GK2503 chaperone protein (heat shock protein); heat shock protein DnaJ domain-containing protein	463450..464220	Alkaliphilus metalliredigens QYMF	5310495
YP_001318340.1	CDS	Amet_0453	NC_009633.1	464758	465237	D	PFAM: VanZ family protein; KEGG: dsy:DSY3286 hypothetical protein; VanZ family protein	464758..465237	Alkaliphilus metalliredigens QYMF	5310496
YP_001318341.1	CDS	Amet_0454	NC_009633.1	465310	466017	R	PFAM: glutamine amidotransferase class-I; KEGG: pca:Pcar_2563 GMP synthase - glutamine amidotransferase domain; glutamine amidotransferase	complement(465310..466017)	Alkaliphilus metalliredigens QYMF	5310497
YP_001318342.1	CDS	Amet_0455	NC_009633.1	466370	467371	D	PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: oih:OB3476 transcriptional repressor; alanine racemase	466370..467371	Alkaliphilus metalliredigens QYMF	5310498
YP_001318343.1	CDS	Amet_0456	NC_009633.1	467431	468453	D	KEGG: bms:BR0544 ribose ABC transporter, periplasmic D-ribose-binding protein; sugar ABC transporter periplasmic protein-like protein	467431..468453	Alkaliphilus metalliredigens QYMF	5310499
YP_001318344.1	CDS	Amet_0457	NC_009633.1	468517	470028	D	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: oih:OB2574 ribose ABC transporter ATP-binding protein; ABC transporter-like protein	468517..470028	Alkaliphilus metalliredigens QYMF	5310500
YP_001318345.1	CDS	Amet_0458	NC_009633.1	470010	470987	D	PFAM: inner-membrane translocator; KEGG: cpf:CPF_1881 ribose ABC transporter, permease protein; monosaccharide-transporting ATPase	470010..470987	Alkaliphilus metalliredigens QYMF	5310501
YP_001318346.1	CDS	Amet_0459	NC_009633.1	471009	471944	D	PFAM: Xylose isomerase domain protein TIM barrel; KEGG: tte:TTE1948 sugar phosphate isomerase/epimerase; xylose isomerase domain-containing protein	471009..471944	Alkaliphilus metalliredigens QYMF	5310502
YP_001318347.1	CDS	Amet_0460	NC_009633.1	471969	473018	D	PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: bha:BH1248 NADH-dependent dyhydrogenase; oxidoreductase domain-containing protein	471969..473018	Alkaliphilus metalliredigens QYMF	5310503
YP_001318348.1	CDS	Amet_0461	NC_009633.1	473171	473713	R	KEGG: tde:TDE2712 hypothetical protein; hypothetical protein	complement(473171..473713)	Alkaliphilus metalliredigens QYMF	5310504
YP_001318349.1	CDS	Amet_0462	NC_009633.1	473913	474896	D	PFAM: alpha/beta hydrolase fold; KEGG: chy:CHY_0890 hydrolase, alpha/beta fold family; alpha/beta hydrolase fold protein	473913..474896	Alkaliphilus metalliredigens QYMF	5310505
YP_001318350.1	CDS	Amet_0463	NC_009633.1	474940	475833	D	PFAM: metal-dependent protein hydrolase; KEGG: cps:CPS_2163 hypothetical protein; metal-dependent protein hydrolase	474940..475833	Alkaliphilus metalliredigens QYMF	5310506
YP_001318351.1	CDS	Amet_0464	NC_009633.1	475914	476963	R	PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; KEGG: cth:Cthe_1297 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	complement(475914..476963)	Alkaliphilus metalliredigens QYMF	5310507
YP_001318352.1	CDS	Amet_0465	NC_009633.1	477801	479114	D	TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: hma:pNG7256 xanthine permease; uracil-xanthine permease	477801..479114	Alkaliphilus metalliredigens QYMF	5310508
YP_001318353.1	CDS	Amet_0466	NC_009633.1	479340	479756	D	KEGG: swo:Swol_1757 hypothetical protein; hypothetical protein	479340..479756	Alkaliphilus metalliredigens QYMF	5310509
YP_001318354.1	CDS	Amet_0467	NC_009633.1	480588	481895	D	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: bld:BLi03297 close homolog to McpA methyl-accepting chemotaxis protein; RBL01413; methyl-accepting chemotaxis sensory transducer	480588..481895	Alkaliphilus metalliredigens QYMF	5310510
YP_001318355.1	CDS	Amet_0468	NC_009633.1	481907	482116	D	hypothetical protein	481907..482116	Alkaliphilus metalliredigens QYMF	5310511
YP_001318356.1	CDS	Amet_0470	NC_009633.1	483409	484200	D	PFAM: molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: dps:DP3068 similar to 4-hydroxybenzoyl-CoA reductase (HcrB); FAD-binding molybdopterin dehydrogenase	483409..484200	Alkaliphilus metalliredigens QYMF	5310513
YP_001318357.1	CDS	Amet_0471	NC_009633.1	484197	484649	D	PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: dps:DP3067 4-hydroxybenzoyl-CoA reductase (HcrC); 2Fe-2S iron-sulfur cluster binding domain-containing protein	484197..484649	Alkaliphilus metalliredigens QYMF	5310514
YP_001318358.1	CDS	Amet_0472	NC_009633.1	484652	486961	D	PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: dps:DP3066 similar to 4-Hydroxybenzoyl-CoA reductase (HcrA); molybdopterin binding aldehyde oxidase and xanthine dehydrogenase	484652..486961	Alkaliphilus metalliredigens QYMF	5310515
YP_001318359.1	CDS	Amet_0473	NC_009633.1	487055	487591	R	hypothetical protein	complement(487055..487591)	Alkaliphilus metalliredigens QYMF	5310516
YP_001318360.1	CDS	Amet_0474	NC_009633.1	488031	488363	D	KEGG: bca:BCE_2880 hypothetical protein; hypothetical protein	488031..488363	Alkaliphilus metalliredigens QYMF	5310517
YP_001318361.1	CDS	Amet_0475	NC_009633.1	488686	489777	D	PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: cac:CAC0192 similar to chloromuconate cycloisomerase; mandelate racemase/muconate lactonizing protein	488686..489777	Alkaliphilus metalliredigens QYMF	5310518
YP_001318362.1	CDS	Amet_0476	NC_009633.1	489809	490738	D	PFAM: peptidase U61, LD-carboxypeptidase A; KEGG: bld:BLi01397 YkfA; peptidase U61, LD-carboxypeptidase A	489809..490738	Alkaliphilus metalliredigens QYMF	5310519
YP_001318363.1	CDS	Amet_0477	NC_009633.1	490845	491831	R	PFAM: peptidase M19, renal dipeptidase; KEGG: tko:TK2040 microsomal dipeptidase homolog; membrane dipeptidase	complement(490845..491831)	Alkaliphilus metalliredigens QYMF	5310520
YP_001318364.1	CDS	Amet_0478	NC_009633.1	492143	492961	D	PFAM: regulatory protein, MerR; KEGG: dsy:DSY3698 hypothetical protein; MerR family transcriptional regulator	492143..492961	Alkaliphilus metalliredigens QYMF	5310521
YP_001318365.1	CDS	Amet_0479	NC_009633.1	493222	495150	D	PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FMN-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: eca:ECA0910 putative flavoprotein subunit of a reductase; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein	493222..495150	Alkaliphilus metalliredigens QYMF	5310522
YP_001318366.1	CDS	Amet_0480	NC_009633.1	495476	496228	D	PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; KEGG: tte:TTE0770 NCAIR mutase (PurE)-related proteins; 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase	495476..496228	Alkaliphilus metalliredigens QYMF	5310523
YP_001318367.1	CDS	Amet_0481	NC_009633.1	496221	497486	D	PFAM: protein of unknown function DUF111; KEGG: cth:Cthe_0369 protein of unknown function DUF111; hypothetical protein	496221..497486	Alkaliphilus metalliredigens QYMF	5310524
YP_001318368.1	CDS	Amet_0482	NC_009633.1	497536	498348	D	PFAM: ExsB family protein; KEGG: chy:CHY_1281 conserved hypothetical protein TIGR00268; ExsB family protein	497536..498348	Alkaliphilus metalliredigens QYMF	5310525
YP_001318369.1	CDS	Amet_0483	NC_009633.1	498533	500191	D	PFAM: peptidase M20; KEGG: cac:CAC0367 arginine degradation protein (gene RocB); peptidase M20	498533..500191	Alkaliphilus metalliredigens QYMF	5310526
YP_001318370.1	CDS	Amet_0484	NC_009633.1	500230	501423	D	TIGRFAM: succinyl-CoA synthetase, beta subunit; PFAM: ATP-citrate lyase/succinyl-CoA ligase; ATP-grasp domain protein; KEGG: gka:GK1208 succinyl-CoA synthetase beta subunit (succinate-CoA ligase beta subunit); succinyl-CoA synthetase subunit beta	500230..501423	Alkaliphilus metalliredigens QYMF	5310527
YP_001318371.1	CDS	Amet_0485	NC_009633.1	501407	502309	D	Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha	501407..502309	Alkaliphilus metalliredigens QYMF	5310528
YP_001318372.1	CDS	Amet_0486	NC_009633.1	502447	503469	D	KEGG: cth:Cthe_0320 hypothetical protein; hypothetical protein	502447..503469	Alkaliphilus metalliredigens QYMF	5310529
YP_001318373.1	CDS	Amet_0487	NC_009633.1	503500	504444	D	PFAM: OmpA/MotB domain protein; KEGG: cjj:CJJ81176_0627 chemotaxis protein MotB, putative; OmpA/MotB domain-containing protein	503500..504444	Alkaliphilus metalliredigens QYMF	5310530
YP_001318374.1	CDS	Amet_0488	NC_009633.1	504719	506431	D	PFAM: ATP-binding region, ATPase domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: oih:OB2520 two-component sensor histidine kinase involved in degradative enzyme; integral membrane sensor signal transduction histidine kinase	504719..506431	Alkaliphilus metalliredigens QYMF	5310531
YP_001318375.1	CDS	Amet_0489	NC_009633.1	506428	507045	D	PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: tte:TTE1681 response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain; two component LuxR family transcriptional regulator	506428..507045	Alkaliphilus metalliredigens QYMF	5310532
YP_001318376.1	CDS	Amet_0490	NC_009633.1	507100	507603	D	hypothetical protein	507100..507603	Alkaliphilus metalliredigens QYMF	5310533
YP_001318377.1	CDS	Amet_0491	NC_009633.1	507674	508483	D	KEGG: hsa:1834 dentin sialophosphoprotein; hypothetical protein	507674..508483	Alkaliphilus metalliredigens QYMF	5310534
YP_001318378.1	CDS	Amet_0492	NC_009633.1	508518	509726	D	TIGRFAM: peptidase S26B, signal peptidase; KEGG: cpf:CPF_2579 signal peptidase I; peptidase S26B, signal peptidase	508518..509726	Alkaliphilus metalliredigens QYMF	5310535
YP_001318379.1	CDS	Amet_0493	NC_009633.1	510087	510707	D	hypothetical protein	510087..510707	Alkaliphilus metalliredigens QYMF	5310536
YP_001318380.1	CDS	Amet_0494	NC_009633.1	510757	511521	D	hypothetical protein	510757..511521	Alkaliphilus metalliredigens QYMF	5310537
YP_001318381.1	CDS	Amet_0495	NC_009633.1	511669	512778	D	hypothetical protein	511669..512778	Alkaliphilus metalliredigens QYMF	5310538
YP_001318382.1	CDS	Amet_0496	NC_009633.1	513172	514461	D	PFAM: S-layer domain protein; KEGG: cth:Cthe_1368 S-layer-like domain containing protein; S-layer protein	513172..514461	Alkaliphilus metalliredigens QYMF	5310539
YP_001318383.1	CDS	Amet_0497	NC_009633.1	514472	514813	D	hypothetical protein	514472..514813	Alkaliphilus metalliredigens QYMF	5310540
YP_001318384.1	CDS	Amet_0498	NC_009633.1	515329	515988	D	PFAM: multi antimicrobial extrusion protein MatE; KEGG: cno:NT01CX_0285 MATE efflux family protein; multi anti extrusion protein MatE	515329..515988	Alkaliphilus metalliredigens QYMF	5310541
YP_001318385.1	CDS	Amet_0499	NC_009633.1	516096	516554	D	KEGG: mkm:Mkms_5396 conserved hypothetical protein; hypothetical protein	516096..516554	Alkaliphilus metalliredigens QYMF	5310542
YP_001318386.1	CDS	Amet_0500	NC_009633.1	516869	517654	R	PFAM: regulatory protein, IclR; Transcriptional regulator IclR-like; KEGG: cff:CFF8240_1062 transcriptional regulator, IclR family; transcriptional regulator IclR-like protein	complement(516869..517654)	Alkaliphilus metalliredigens QYMF	5310543
YP_001318387.1	CDS	Amet_0501	NC_009633.1	518093	519523	D	PFAM: Gluconate transporter; Citrate transporter; KEGG: msu:MS0335 GntT protein; gluconate transporter	518093..519523	Alkaliphilus metalliredigens QYMF	5310544
YP_001318388.1	CDS	Amet_0502	NC_009633.1	519626	521350	D	PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; KEGG: rpc:RPC_4380 dihydroxy-acid dehydratase; dihydroxy-acid dehydratase	519626..521350	Alkaliphilus metalliredigens QYMF	5310545
YP_001318389.1	CDS	Amet_0503	NC_009633.1	521677	522579	D	PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: cje:Cj0021c hypothetical protein; fumarylacetoacetate (FAA) hydrolase	521677..522579	Alkaliphilus metalliredigens QYMF	5310546
YP_001318390.1	CDS	Amet_0504	NC_009633.1	522612	523772	D	PFAM: aminotransferase, class I and II; KEGG: art:Arth_1423 aminotransferase, class I and II; class I and II aminotransferase	522612..523772	Alkaliphilus metalliredigens QYMF	5310547
YP_001318391.1	CDS	Amet_0505	NC_009633.1	523817	524605	D	PFAM: HpcH/HpaI aldolase; KEGG: ter:Tery_2821 HpcH/HpaI aldolase; 2-dehydro-3-deoxyglucarate aldolase	523817..524605	Alkaliphilus metalliredigens QYMF	5310548
YP_001318392.1	CDS	Amet_0506	NC_009633.1	524670	527090	D	TIGRFAM: pyruvate formate-lyase; PFAM: formate C-acetyltransferase glycine radical; pyruvate formate-lyase, PFL; KEGG: cno:NT01CX_0385 pyruvate formate-lyase; pyruvate formate-lyase	524670..527090	Alkaliphilus metalliredigens QYMF	5310549
YP_001318393.1	CDS	Amet_0507	NC_009633.1	527125	527901	D	TIGRFAM: glycyl-radical enzyme activating protein family; PFAM: Radical SAM domain protein; KEGG: spd:SPD_0229 glycyl-radical enzyme activating protein family protein; glycyl-radical activating family protein	527125..527901	Alkaliphilus metalliredigens QYMF	5310550
YP_001318394.1	CDS	Amet_0508	NC_009633.1	527981	528295	D	KEGG: tte:TTE1235 hypothetical protein; hypothetical protein	527981..528295	Alkaliphilus metalliredigens QYMF	5310551
YP_001318395.1	CDS	Amet_0509	NC_009633.1	528288	529703	D	PFAM: Pyridoxal-5'-phosphate-dependent protein, beta subunit; KEGG: tte:TTE1236 threonine synthase; pyridoxal-5'-phosphate-dependent protein subunit beta	528288..529703	Alkaliphilus metalliredigens QYMF	5310552
YP_001318396.1	CDS	Amet_0510	NC_009633.1	529743	531092	D	catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; 4-aminobutyrate aminotransferase	529743..531092	Alkaliphilus metalliredigens QYMF	5310553
YP_001318397.1	CDS	Amet_0511	NC_009633.1	531217	533358	R	PFAM: ThiJ/PfpI domain protein; Catalase domain protein; KEGG: bha:BH1980 catalase; catalase	complement(531217..533358)	Alkaliphilus metalliredigens QYMF	5310554
YP_001318398.1	CDS	Amet_0512	NC_009633.1	533508	534623	R	PFAM: spore germination B3 GerAC family protein; KEGG: bha:BH2186 hypothetical protein; spore germination B3 GerAC family protein	complement(533508..534623)	Alkaliphilus metalliredigens QYMF	5310555
YP_001318399.1	CDS	Amet_0513	NC_009633.1	534644	535759	R	TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: bcz:BCZK2852 spore germination protein; possible amino acid permease; spore germination protein	complement(534644..535759)	Alkaliphilus metalliredigens QYMF	5310556
YP_001318400.1	CDS	Amet_0514	NC_009633.1	535778	537331	R	PFAM: GerA spore germination protein; KEGG: bcz:pE33L466_0139 spore germination protein KA; GerA spore germination protein	complement(535778..537331)	Alkaliphilus metalliredigens QYMF	5310557
YP_001318401.1	CDS	Amet_0515	NC_009633.1	537610	538482	D	TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; SMART: extracellular solute-binding protein, family 3; KEGG: fnu:FN1135 phosphonates-binding protein; phosphonate ABC transporter periplasmic phosphonate-binding protein	537610..538482	Alkaliphilus metalliredigens QYMF	5310558
YP_001318402.1	CDS	Amet_0516	NC_009633.1	538494	539240	D	TIGRFAM: phosphonate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ser:SERP2285 phosphonate ABC transporter, ATP-binding protein; phosphonate ABC transporter ATPase	538494..539240	Alkaliphilus metalliredigens QYMF	5310559
YP_001318403.1	CDS	Amet_0517	NC_009633.1	539218	540834	D	TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: fnu:FN1137 phosphonates transport system permease protein phnE; phosphonate ABC transporter inner membrane protein	539218..540834	Alkaliphilus metalliredigens QYMF	5310560
YP_001318404.1	CDS	Amet_0518	NC_009633.1	540894	541781	R	PFAM: protein of unknown function DUF214; KEGG: chy:CHY_0168 cell division protein FtsX; hypothetical protein	complement(540894..541781)	Alkaliphilus metalliredigens QYMF	5310561
YP_001318405.1	CDS	Amet_0519	NC_009633.1	541783	542457	R	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dsy:DSY4865 hypothetical protein; ABC transporter-like protein	complement(541783..542457)	Alkaliphilus metalliredigens QYMF	5310562
YP_001318406.1	CDS	Amet_0520	NC_009633.1	542484	543605	R	KEGG: sth:STH2334 hypothetical protein; membrane-bound metallopeptidase-like protein	complement(542484..543605)	Alkaliphilus metalliredigens QYMF	5310563
YP_001318407.1	CDS	Amet_0521	NC_009633.1	544144	546024	D	molecular chaperone; heat shock protein 90	544144..546024	Alkaliphilus metalliredigens QYMF	5310564
YP_001318408.1	CDS	Amet_0522	NC_009633.1	546504	547139	D	KEGG: pmn:PMN2A_1035 ABC-type metal ion transport system periplasmic component; hypothetical protein	546504..547139	Alkaliphilus metalliredigens QYMF	5310565
YP_001318409.1	CDS	Amet_0523	NC_009633.1	547161	547832	D	catalyzes the ATP-dependent transport of cobalt; cobalt transport protein CbiM	547161..547832	Alkaliphilus metalliredigens QYMF	5310566
YP_001318410.1	CDS	Amet_0524	NC_009633.1	547861	548622	D	PFAM: cobalt transport protein; KEGG: mla:Mlab_1390 excinuclease ABC, C subunit domain protein; cobalt transport protein	547861..548622	Alkaliphilus metalliredigens QYMF	5310567
YP_001318411.1	CDS	Amet_0525	NC_009633.1	548619	549431	D	TIGRFAM: cobalt ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: chy:CHY_1630 cobalt ABC transporter, ATP-binding protein; cobalt ABC transporter ATPase	548619..549431	Alkaliphilus metalliredigens QYMF	5310568
YP_001318412.1	CDS	Amet_0526	NC_009633.1	549493	549930	D	KEGG: tde:TDE2130 hypothetical protein; hypothetical protein	549493..549930	Alkaliphilus metalliredigens QYMF	5310569
YP_001318413.1	CDS	Amet_0527	NC_009633.1	550244	551284	R	PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: swo:Swol_1894 HD-GYP domain; metal dependent phosphohydrolase	complement(550244..551284)	Alkaliphilus metalliredigens QYMF	5310570
YP_001318414.1	CDS	Amet_0528	NC_009633.1	551514	552341	D	PFAM: protein of unknown function DUF34; KEGG: chy:CHY_1566 hypothetical protein; hypothetical protein	551514..552341	Alkaliphilus metalliredigens QYMF	5310571
YP_001318415.1	CDS	Amet_0529	NC_009633.1	552516	553244	D	KEGG: sus:Acid_5580 putative transmembrane protein; putative transmembrane protein	552516..553244	Alkaliphilus metalliredigens QYMF	5310572
YP_001318416.1	CDS	Amet_0530	NC_009633.1	553418	553774	D	PFAM: protein of unknown function DUF882; Peptidase M15A; KEGG: mma:MM3062 hypothetical protein; peptidase M15A	553418..553774	Alkaliphilus metalliredigens QYMF	5310573
YP_001318417.1	CDS	Amet_0531	NC_009633.1	553838	554464	D	PFAM: Phosphoglycerate mutase; KEGG: gka:GK1466 phosphoglycerate mutase; phosphoglycerate mutase	553838..554464	Alkaliphilus metalliredigens QYMF	5310574
YP_001318418.1	CDS	Amet_0532	NC_009633.1	554573	554884	R	PFAM: protein of unknown function DUF74; KEGG: cno:NT01CX_0170 hypothetical UPF0145 protein; hypothetical protein	complement(554573..554884)	Alkaliphilus metalliredigens QYMF	5310575
YP_001318419.1	CDS	Amet_0533	NC_009633.1	554865	555104	R	hypothetical protein	complement(554865..555104)	Alkaliphilus metalliredigens QYMF	5310576
YP_001318420.1	CDS	Amet_0534	NC_009633.1	555108	555374	R	KEGG: oih:OB2607 hypothetical protein; hypothetical protein	complement(555108..555374)	Alkaliphilus metalliredigens QYMF	5310577
YP_001318421.1	CDS	Amet_0535	NC_009633.1	555525	556361	D	KEGG: tte:TTE0483 hypothetical protein; hypothetical protein	555525..556361	Alkaliphilus metalliredigens QYMF	5310578
YP_001318422.1	CDS	Amet_0536	NC_009633.1	556434	556637	D	hypothetical protein	556434..556637	Alkaliphilus metalliredigens QYMF	5310579
YP_001318423.1	CDS	Amet_0537	NC_009633.1	556954	557577	D	PFAM: beta-lactamase domain protein; KEGG: bcl:ABC2499 hypothetical protein; beta-lactamase domain-containing protein	556954..557577	Alkaliphilus metalliredigens QYMF	5310580
YP_001318424.1	CDS	Amet_0538	NC_009633.1	557742	559028	R	KEGG: dsy:DSY3881 hypothetical protein; hypothetical protein	complement(557742..559028)	Alkaliphilus metalliredigens QYMF	5310581
YP_001318425.1	CDS	Amet_0539	NC_009633.1	559368	560537	D	KEGG: sal:Sala_1461 uncharacterized membrane protein-like protein; hypothetical protein	559368..560537	Alkaliphilus metalliredigens QYMF	5310582
YP_001318426.1	CDS	Amet_0540	NC_009633.1	560690	561643	R	PFAM: Pyridoxal-5'-phosphate-dependent protein, beta subunit; KEGG: tac:Ta0113 probable threonine dehydratase, biodegradative; pyridoxal-5'-phosphate-dependent protein subunit beta	complement(560690..561643)	Alkaliphilus metalliredigens QYMF	5310583
YP_001318427.1	CDS	Amet_0541	NC_009633.1	561785	562747	R	PFAM: Peptidoglycan-binding domain 1 protein; Peptidoglycan-binding LysM; KEGG: tte:TTE2219 LysM-repeat proteins and domains; peptidoglycan binding domain-containing protein	complement(561785..562747)	Alkaliphilus metalliredigens QYMF	5310584
YP_001318428.1	CDS	Amet_0542	NC_009633.1	563103	565271	D	PFAM: Peptidoglycan-binding LysM; metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: bld:BLi00814 similar to 2',3'-cyclic-nucleotide 2'-phosphodiesterase; RBL02320; 5'-nucleotidase domain-containing protein	563103..565271	Alkaliphilus metalliredigens QYMF	5310585
YP_001318429.1	CDS	Amet_0543	NC_009633.1	565341	566498	R	PFAM: YibE/F family protein; KEGG: cac:CAC2436 hypothetical protein; hypothetical protein	complement(565341..566498)	Alkaliphilus metalliredigens QYMF	5310586
YP_001318430.1	CDS	Amet_0544	NC_009633.1	566552	567400	R	PFAM: helix-turn-helix- domain containing protein, AraC type; AraC protein, arabinose-binding/dimerisation; KEGG: bld:BLi00865 YfiF; helix-turn-helix domain-containing protein	complement(566552..567400)	Alkaliphilus metalliredigens QYMF	5310587
YP_001318431.1	CDS	Amet_0545	NC_009633.1	567629	569026	D	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: pho:PH0577 damage-inducible protein; MATE efflux family protein	567629..569026	Alkaliphilus metalliredigens QYMF	5310588
YP_001318432.1	CDS	Amet_0546	NC_009633.1	569181	569891	D	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cth:Cthe_1288 two component transcriptional regulator, winged helix family; two component transcriptional regulator	569181..569891	Alkaliphilus metalliredigens QYMF	5310589
YP_001318433.1	CDS	Amet_0547	NC_009633.1	569884	571275	D	PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; KEGG: cac:CAC3219 membrane associated histidine kinase with HAMP domain; integral membrane sensor signal transduction histidine kinase	569884..571275	Alkaliphilus metalliredigens QYMF	5310590
YP_001318434.1	CDS	Amet_0548	NC_009633.1	571409	571888	R	hypothetical protein	complement(571409..571888)	Alkaliphilus metalliredigens QYMF	5310591
YP_001318435.1	CDS	Amet_0549	NC_009633.1	572006	572785	R	PFAM: phospholipase C zinc-binding protein; KEGG: cth:Cthe_3193 phospholipase C zinc-binding; phospholipase C zinc-binding protein	complement(572006..572785)	Alkaliphilus metalliredigens QYMF	5310592
YP_001318436.1	CDS	Amet_0550	NC_009633.1	573390	574424	D	TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: rsp:RSP_1605 TRAP-T family transporter, periplasmic binding protein, DctP; TRAP dicarboxylate transporter subunit DctP	573390..574424	Alkaliphilus metalliredigens QYMF	5310593
YP_001318437.1	CDS	Amet_0551	NC_009633.1	574564	575079	D	PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: oih:OB0242 C4-dicarboxylate transport system permease small protein; tripartite ATP-independent periplasmic transporter DctQ	574564..575079	Alkaliphilus metalliredigens QYMF	5310594
YP_001318438.1	CDS	Amet_0552	NC_009633.1	575070	576359	D	TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: msu:MS0528 hypothetical protein; TRAP dicarboxylate transporter subunit DctM	575070..576359	Alkaliphilus metalliredigens QYMF	5310595
YP_001318439.1	CDS	Amet_0553	NC_009633.1	576459	577115	D	PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: tte:TTE2558 transcriptional regulator; GntR family transcriptional regulator	576459..577115	Alkaliphilus metalliredigens QYMF	5310596
YP_001318440.1	CDS	Amet_0554	NC_009633.1	577209	578237	D	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bth:BT_3617 sorbitol dehydrogenase; alcohol dehydrogenase	577209..578237	Alkaliphilus metalliredigens QYMF	5310597
YP_001318441.1	CDS	Amet_0555	NC_009633.1	578335	579786	D	catalyzes the formation of D-tagaturonate from D-altronate; altronate oxidoreductase	578335..579786	Alkaliphilus metalliredigens QYMF	5310598
YP_001318442.1	CDS	Amet_0556	NC_009633.1	579788	581275	D	PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain; KEGG: cac:CAC0696 putative altronate dehydratase; altronate dehydratase	579788..581275	Alkaliphilus metalliredigens QYMF	5310599
YP_001318443.1	CDS	Amet_0557	NC_009633.1	581628	583130	D	TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase, FGGY; KEGG: tte:TTE2002 glycerol kinase; glycerol kinase	581628..583130	Alkaliphilus metalliredigens QYMF	5310600
YP_001318444.1	CDS	Amet_0558	NC_009633.1	583641	584708	D	PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: fnu:FN1258 C4-dicarboxylate-binding protein; TRAP dicarboxylate transporter subunit DctP	583641..584708	Alkaliphilus metalliredigens QYMF	5310601
YP_001318445.1	CDS	Amet_0559	NC_009633.1	584865	585377	D	PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: fnu:FN1257 C4-dicarboxylate transporter small subunit; tripartite ATP-independent periplasmic transporter DctQ	584865..585377	Alkaliphilus metalliredigens QYMF	5310602
YP_001318446.1	CDS	Amet_0560	NC_009633.1	585415	586695	D	TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: fnu:FN1256 C4-dicarboxylate transporter large subunit; TRAP dicarboxylate transporter subunit DctM	585415..586695	Alkaliphilus metalliredigens QYMF	5310603
YP_001318447.1	CDS	Amet_0561	NC_009633.1	586716	587423	D	PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: fnu:FN1891 glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase	586716..587423	Alkaliphilus metalliredigens QYMF	5310604
YP_001318448.1	CDS	Amet_0562	NC_009633.1	587562	588128	D	PFAM: glycerol-3-phosphate responsive antiterminator; KEGG: cno:NT01CX_0613 glycerol uptake operon antiterminator regulatory protein; glycerol-3-phosphate responsive antiterminator	587562..588128	Alkaliphilus metalliredigens QYMF	5310605
YP_001318449.1	CDS	Amet_0563	NC_009633.1	588277	589002	D	PFAM: amino acid-binding ACT domain protein; MgtC/SapB transporter; KEGG: cth:Cthe_1919 MgtC/SapB transporter; MgtC/SapB transporter	588277..589002	Alkaliphilus metalliredigens QYMF	5310606
YP_001318450.1	CDS	Amet_0564	NC_009633.1	589113	590411	D	KEGG: dsy:DSY3881 hypothetical protein; hypothetical protein	589113..590411	Alkaliphilus metalliredigens QYMF	5310607
YP_001318451.1	CDS	Amet_0565	NC_009633.1	590544	591047	D	KEGG: cth:Cthe_1377 amino acid-binding ACT; hypothetical protein	590544..591047	Alkaliphilus metalliredigens QYMF	5310608
YP_001318452.1	CDS	Amet_0566	NC_009633.1	591090	592388	D	catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase	591090..592388	Alkaliphilus metalliredigens QYMF	5310609
YP_001318453.1	CDS	Amet_0567	NC_009633.1	592441	593502	D	TIGRFAM: threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein, beta subunit; KEGG: tte:TTE2619 threonine synthase; threonine synthase	592441..593502	Alkaliphilus metalliredigens QYMF	5310610
YP_001318454.1	CDS	Amet_0568	NC_009633.1	593504	594400	D	TIGRFAM: homoserine kinase; PFAM: GHMP kinase; KEGG: ctc:CTC02357 homoserine kinase; homoserine kinase	593504..594400	Alkaliphilus metalliredigens QYMF	5310611
YP_001318455.1	CDS	Amet_0569	NC_009633.1	594647	594910	D	TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: ade:Adeh_0152 HPrNtr; phosphotransferase system, phosphocarrier protein HPr	594647..594910	Alkaliphilus metalliredigens QYMF	5310612
YP_001318456.1	CDS	Amet_0570	NC_009633.1	595096	596286	D	PFAM: tRNA synthetase, class II (G, H, P and S); KEGG: cth:Cthe_2880 histidyl-tRNA synthetase; histidine--tRNA ligase	595096..596286	Alkaliphilus metalliredigens QYMF	5310613
YP_001318457.1	CDS	Amet_0571	NC_009633.1	596386	597015	D	TIGRFAM: ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase, catalytic region; KEGG: cac:CAC0936 ATP phosphoribosyltransferase; ATP phosphoribosyltransferase	596386..597015	Alkaliphilus metalliredigens QYMF	5310614
YP_001318458.1	CDS	Amet_0572	NC_009633.1	597030	598331	D	PFAM: histidinol dehydrogenase; KEGG: tte:TTE2138 histidinol dehydrogenase; histidinol dehydrogenase	597030..598331	Alkaliphilus metalliredigens QYMF	5310615
YP_001318459.1	CDS	Amet_0573	NC_009633.1	598321	599412	D	TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase, class I and II; Allinase-like; KEGG: cno:NT01CX_1063 histidinol-phosphate aminotransferase; histidinol-phosphate aminotransferase	598321..599412	Alkaliphilus metalliredigens QYMF	5310616
YP_001318460.1	CDS	Amet_0574	NC_009633.1	599442	600029	D	PFAM: imidazoleglycerol-phosphate dehydratase; KEGG: cth:Cthe_2884 imidazoleglycerol-phosphate dehydratase; imidazoleglycerol-phosphate dehydratase	599442..600029	Alkaliphilus metalliredigens QYMF	5310617
YP_001318461.1	CDS	Amet_0575	NC_009633.1	600045	600653	D	TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I; CobB/CobQ domain protein glutamine amidotransferase; KEGG: tte:TTE2135 glutamine amidotransferase; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit	600045..600653	Alkaliphilus metalliredigens QYMF	5310618
YP_001318462.1	CDS	Amet_0576	NC_009633.1	600650	601363	D	TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: histidine biosynthesis protein; KEGG: oih:OB0548 phosphoribosyl formimino-5-aminoimidazole isomerase; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase	600650..601363	Alkaliphilus metalliredigens QYMF	5310619
YP_001318463.1	CDS	Amet_0577	NC_009633.1	601360	602118	D	TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein; KEGG: tte:TTE2133 imidazoleglycerol-phosphate synthase; Imidazole glycerol phosphate synthase cyclase subunit	601360..602118	Alkaliphilus metalliredigens QYMF	5310620
YP_001318464.1	CDS	Amet_0578	NC_009633.1	602127	602777	D	PFAM: phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-ATP pyrophosphohydrolase; KEGG: tte:TTE2132 phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-AMP cyclohydrolase	602127..602777	Alkaliphilus metalliredigens QYMF	5310621
YP_001318465.1	CDS	Amet_0579	NC_009633.1	602876	606316	R	biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate; pyruvate carboxylase	complement(602876..606316)	Alkaliphilus metalliredigens QYMF	5310622
YP_001318466.1	CDS	Amet_0580	NC_009633.1	606747	608246	D	PFAM: sodium:neurotransmitter symporter; KEGG: cfe:CF0515 sodium-dependent transporter; sodium:neurotransmitter symporter	606747..608246	Alkaliphilus metalliredigens QYMF	5310623
YP_001318467.1	CDS	Amet_0581	NC_009633.1	608681	608827	D	hypothetical protein	608681..608827	Alkaliphilus metalliredigens QYMF	5310624
YP_001318468.1	CDS	Amet_0582	NC_009633.1	608889	610631	D	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: cac:CAC0250 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer	608889..610631	Alkaliphilus metalliredigens QYMF	5310625
YP_001318469.1	CDS	Amet_0583	NC_009633.1	610847	611740	D	TIGRFAM: glycyl-radical enzyme activating protein family; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Radical SAM domain protein; KEGG: tko:TK0290 pyruvate-formate lyase-activating enzyme; glycyl-radical activating family protein	610847..611740	Alkaliphilus metalliredigens QYMF	5310626
YP_001318470.1	CDS	Amet_0584	NC_009633.1	611742	614120	D	PFAM: formate C-acetyltransferase glycine radical; pyruvate formate-lyase, PFL; KEGG: gsu:GSU2101 formate acetyltransferase; formate C-acetyltransferase	611742..614120	Alkaliphilus metalliredigens QYMF	5310627
YP_001318471.1	CDS	Amet_0585	NC_009633.1	614384	615139	D	TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: fnu:FN0047 exodeoxyribonuclease III; exodeoxyribonuclease III Xth	614384..615139	Alkaliphilus metalliredigens QYMF	5310628
YP_001318472.1	CDS	Amet_0586	NC_009633.1	615535	616536	D	PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: btl:BALH_0606 ribose operon repressor; periplasmic binding protein/LacI transcriptional regulator	615535..616536	Alkaliphilus metalliredigens QYMF	5310629
YP_001318473.1	CDS	Amet_0587	NC_009633.1	616615	618111	D	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gka:GK1894 sugar ABC transporter (ATP-binding protein); ABC transporter-like protein	616615..618111	Alkaliphilus metalliredigens QYMF	5310630
YP_001318474.1	CDS	Amet_0588	NC_009633.1	618127	619116	D	PFAM: inner-membrane translocator; KEGG: ret:RHE_CH01211 probable sugar ABC transporter, permease protein; monosaccharide-transporting ATPase	618127..619116	Alkaliphilus metalliredigens QYMF	5310631
YP_001318475.1	CDS	Amet_0589	NC_009633.1	619165	620151	D	KEGG: bha:BH2323 putative simple sugar transport system substrate-binding protein; sugar ABC transporter periplasmic protein-like protein	619165..620151	Alkaliphilus metalliredigens QYMF	5310632
YP_001318476.1	CDS	Amet_0590	NC_009633.1	620247	621287	D	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: cpf:CPF_0732 L-iditol 2-dehydrogenase; alcohol dehydrogenase	620247..621287	Alkaliphilus metalliredigens QYMF	5310633
YP_001318477.1	CDS	Amet_0591	NC_009633.1	621325	622797	D	TIGRFAM: xylulokinase; PFAM: carbohydrate kinase, FGGY; KEGG: mta:Moth_2025 xylulokinase; xylulokinase	621325..622797	Alkaliphilus metalliredigens QYMF	5310634
YP_001318478.1	CDS	Amet_0592	NC_009633.1	622972	623955	D	catalyzes the formation of pyruvate from D-cysteine; D-cysteine desulfhydrase	622972..623955	Alkaliphilus metalliredigens QYMF	5310635
YP_001318479.1	CDS	Amet_0593	NC_009633.1	623952	624608	R	PFAM: nitroreductase; KEGG: tte:TTE1807 nitroreductase; nitroreductase	complement(623952..624608)	Alkaliphilus metalliredigens QYMF	5310636
YP_001318480.1	CDS	Amet_0594	NC_009633.1	624743	628168	D	PFAM: SNF2-related protein; helicase domain protein; zinc finger, SWIM domain protein; SNF2 helicase associated domain protein; SMART: DEAD-like helicases-like; KEGG: cth:Cthe_2451 SNF2-related protein; non-specific serine/threonine protein kinase	624743..628168	Alkaliphilus metalliredigens QYMF	5310637
YP_001318481.1	CDS	Amet_0595	NC_009633.1	628403	628684	D	TIGRFAM: prevent-host-death family protein; KEGG: swo:Swol_1410 hypothetical protein; prevent-host-death family protein	628403..628684	Alkaliphilus metalliredigens QYMF	5310638
YP_001318482.1	CDS	Amet_0596	NC_009633.1	628674	628991	D	PFAM: plasmid stabilization system; KEGG: dsy:DSY1238 hypothetical protein; plasmid stabilization system protein	628674..628991	Alkaliphilus metalliredigens QYMF	5310639
YP_001318483.1	CDS	Amet_0597	NC_009633.1	629292	629876	D	PFAM: regulatory protein, TetR; KEGG: bld:BLi02021 hypothetical protein; TetR family transcriptional regulator	629292..629876	Alkaliphilus metalliredigens QYMF	5310640
YP_001318484.1	CDS	Amet_0598	NC_009633.1	629882	630592	D	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: swo:Swol_1715 ATPase; ABC transporter-like protein	629882..630592	Alkaliphilus metalliredigens QYMF	5310641
YP_001318485.1	CDS	Amet_0599	NC_009633.1	630592	632949	D	PFAM: protein of unknown function DUF214; KEGG: swo:Swol_1714 hypothetical protein; hypothetical protein	630592..632949	Alkaliphilus metalliredigens QYMF	5310642
YP_001318486.1	CDS	Amet_0600	NC_009633.1	632992	634224	D	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: biotin/lipoyl attachment domain-containing protein; secretion protein HlyD family protein; KEGG: dsy:DSY1327 hypothetical protein; RND family efflux transporter MFP subunit	632992..634224	Alkaliphilus metalliredigens QYMF	5310643
YP_001318487.1	CDS	Amet_0601	NC_009633.1	634291	635652	D	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: dsy:DSY4423 hypothetical protein; radical SAM domain-containing protein	634291..635652	Alkaliphilus metalliredigens QYMF	5310644
YP_001318488.1	CDS	Amet_0602	NC_009633.1	635777	637660	D	PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; NMT1/THI5 like; KEGG: wsu:WS1436 putative two-component sensor; integral membrane sensor signal transduction histidine kinase	635777..637660	Alkaliphilus metalliredigens QYMF	5310645
YP_001318489.1	CDS	Amet_0603	NC_009633.1	637647	638432	D	PFAM: response regulator receiver; KEGG: ppd:Ppro_0115 response regulator receiver modulated diguanylate cyclase; response regulator receiver protein	637647..638432	Alkaliphilus metalliredigens QYMF	5310646
YP_001318490.1	CDS	Amet_0604	NC_009633.1	638746	640101	D	TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: efa:EF2573 xanthine/uracil permease family protein; uracil-xanthine permease	638746..640101	Alkaliphilus metalliredigens QYMF	5310647
YP_001318491.1	CDS	Amet_0605	NC_009633.1	640104	640907	D	PFAM: molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: dps:DP3068 similar to 4-hydroxybenzoyl-CoA reductase (HcrB); FAD-binding molybdopterin dehydrogenase	640104..640907	Alkaliphilus metalliredigens QYMF	5310648
YP_001318492.1	CDS	Amet_0606	NC_009633.1	640897	641364	D	PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: dps:DP3067 4-hydroxybenzoyl-CoA reductase (HcrC); 2Fe-2S iron-sulfur cluster binding domain-containing protein	640897..641364	Alkaliphilus metalliredigens QYMF	5310649
YP_001318493.1	CDS	Amet_0607	NC_009633.1	641348	643642	D	PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: dps:DP3066 similar to 4-Hydroxybenzoyl-CoA reductase (HcrA); xanthine dehydrogenase	641348..643642	Alkaliphilus metalliredigens QYMF	5310650
YP_001318494.1	CDS	Amet_0608	NC_009633.1	644177	645730	D	TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring C-terminal domain protein; KEGG: tte:TTE1442 flagellar biosynthesis/type III secretory pathway lipoprotein; flagellar M-ring protein FliF	644177..645730	Alkaliphilus metalliredigens QYMF	5310651
YP_001318495.1	CDS	fliG	NC_009633.1	645741	646760	D	One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G	645741..646760	Alkaliphilus metalliredigens QYMF	5310652
YP_001318496.1	CDS	Amet_0611	NC_009633.1	646954	647370	D	PFAM: flagellar basal body-associated protein FliL; KEGG: tte:TTE1431 flagellar basal body-associated protein; flagellar basal body-associated protein FliL	646954..647370	Alkaliphilus metalliredigens QYMF	5310654
YP_001318497.1	CDS	Amet_0612	NC_009633.1	647383	648378	D	PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM; KEGG: cth:Cthe_0477 flagellar motor switch protein FliM; flagellar motor switch protein FliM	647383..648378	Alkaliphilus metalliredigens QYMF	5310655
YP_001318498.1	CDS	Amet_0613	NC_009633.1	648371	648802	D	TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: tte:TTE1429 chemotaxis protein CheC, inhibitor of MCP methylation; flagellar motor switch protein FliN	648371..648802	Alkaliphilus metalliredigens QYMF	5310656
YP_001318499.1	CDS	Amet_0614	NC_009633.1	648936	649298	D	PFAM: response regulator receiver; KEGG: cth:Cthe_0479 response regulator receiver protein; response regulator receiver protein	648936..649298	Alkaliphilus metalliredigens QYMF	5310657
YP_001318500.1	CDS	Amet_0615	NC_009633.1	649363	651390	D	TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein; KEGG: cth:Cthe_0485 flagellar biosynthesis protein FlhA; flagellar biosynthesis protein FlhA	649363..651390	Alkaliphilus metalliredigens QYMF	5310658
YP_001318501.1	CDS	Amet_0616	NC_009633.1	651485	652816	R	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: bha:BH4045 hypothetical protein; MATE efflux family protein	complement(651485..652816)	Alkaliphilus metalliredigens QYMF	5310659
YP_001318502.1	CDS	Amet_0617	NC_009633.1	652904	653725	D	PFAM: regulatory protein, MerR; KEGG: bsu:BG10904 transcriptional regulator of the bltD operon; MerR family transcriptional regulator	652904..653725	Alkaliphilus metalliredigens QYMF	5310660
YP_001318503.1	CDS	Amet_0618	NC_009633.1	654230	654958	D	PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: fnu:FN0219 autolysin response regulator; LytTR family two component transcriptional regulator	654230..654958	Alkaliphilus metalliredigens QYMF	5310661
YP_001318504.1	CDS	Amet_0619	NC_009633.1	654968	656290	D	PFAM: ATP-binding region, ATPase domain protein; KEGG: cpf:CPF_0499 sensor histidine kinase; signal transduction histidine kinase regulating citrate/malate metabolism	654968..656290	Alkaliphilus metalliredigens QYMF	5310662
YP_001318505.1	CDS	Amet_0620	NC_009633.1	656410	656991	D	PFAM: Accessory gene regulator B; KEGG: dsy:DSY2528 hypothetical protein; accessory gene regulator B	656410..656991	Alkaliphilus metalliredigens QYMF	5310663
YP_001318506.1	CDS	Amet_0621	NC_009633.1	657304	658134	D	hypothetical protein	657304..658134	Alkaliphilus metalliredigens QYMF	5310664
YP_001318507.1	CDS	Amet_0622	NC_009633.1	658891	660129	D	PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; KEGG: mac:MA4183 reverse transcriptase; RNA-directed DNA polymerase	658891..660129	Alkaliphilus metalliredigens QYMF	5310665
YP_001318508.1	CDS	Amet_0623	NC_009633.1	660216	661823	R	KEGG: mhu:Mhun_1523 transposase, IS4; transposase, IS4	complement(660216..661823)	Alkaliphilus metalliredigens QYMF	5310666
YP_001318509.1	CDS	Amet_0624	NC_009633.1	662490	662654	D	hypothetical protein	662490..662654	Alkaliphilus metalliredigens QYMF	5310667
YP_001318510.1	CDS	Amet_0625	NC_009633.1	662790	663101	D	hypothetical protein	662790..663101	Alkaliphilus metalliredigens QYMF	5310668
YP_001318511.1	CDS	Amet_0626	NC_009633.1	663255	663413	D	hypothetical protein	663255..663413	Alkaliphilus metalliredigens QYMF	5310669
YP_001318512.1	CDS	Amet_0627	NC_009633.1	663437	663565	D	hypothetical protein	663437..663565	Alkaliphilus metalliredigens QYMF	5310670
YP_001318513.1	CDS	Amet_0628	NC_009633.1	663599	664483	D	hypothetical protein	663599..664483	Alkaliphilus metalliredigens QYMF	5310671
YP_001318514.1	CDS	Amet_0629	NC_009633.1	664839	665570	D	hypothetical protein	664839..665570	Alkaliphilus metalliredigens QYMF	5310672
YP_001318515.1	CDS	Amet_0630	NC_009633.1	665839	666024	D	hypothetical protein	665839..666024	Alkaliphilus metalliredigens QYMF	5310673
YP_001318516.1	CDS	Amet_0631	NC_009633.1	666043	666534	D	PFAM: ATP-binding region, ATPase domain protein; KEGG: cpf:CPF_0499 sensor histidine kinase; ATPase domain-containing protein	666043..666534	Alkaliphilus metalliredigens QYMF	5310674
YP_001318517.1	CDS	Amet_0632	NC_009633.1	666880	667380	D	hypothetical protein	666880..667380	Alkaliphilus metalliredigens QYMF	5310675
YP_001318518.1	CDS	Amet_0633	NC_009633.1	667384	667740	D	KEGG: bcz:pE33L5_0002 hypothetical protein; hypothetical protein	667384..667740	Alkaliphilus metalliredigens QYMF	5310676
YP_001318519.1	CDS	Amet_0634	NC_009633.1	667748	668221	D	hypothetical protein	667748..668221	Alkaliphilus metalliredigens QYMF	5310677
YP_001318520.1	CDS	Amet_0636	NC_009633.1	669553	670056	D	KEGG: tte:TTE0622 hypothetical protein; hypothetical protein	669553..670056	Alkaliphilus metalliredigens QYMF	5310679
YP_001318521.1	CDS	Amet_0637	NC_009633.1	670228	670965	D	PFAM: protein of unknown function DUF881; KEGG: tte:TTE1642 hypothetical protein; hypothetical protein	670228..670965	Alkaliphilus metalliredigens QYMF	5310680
YP_001318522.1	CDS	Amet_0638	NC_009633.1	671168	671677	D	PFAM: NADH dehydrogenase (ubiquinone), 24 kDa subunit; KEGG: pca:Pcar_1846 NADH:ubiquinone oxidoreductase 24 kD subunit-like; NADH dehydrogenase (ubiquinone), 24 kDa subunit	671168..671677	Alkaliphilus metalliredigens QYMF	5310681
YP_001318523.1	CDS	Amet_0639	NC_009633.1	671689	672078	D	KEGG: mta:Moth_1718 NADH dehydrogenase (quinone); NADH dehydrogenase (quinone)	671689..672078	Alkaliphilus metalliredigens QYMF	5310682
YP_001318524.1	CDS	Amet_0640	NC_009633.1	672097	673740	D	PFAM: Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: bth:BT_0125 NADH:ubiquinone oxidoreductase subunit; NADH dehydrogenase (quinone)	672097..673740	Alkaliphilus metalliredigens QYMF	5310683
YP_001318525.1	CDS	Amet_0641	NC_009633.1	673832	675580	D	TIGRFAM: hydrogenase, Fe-only; PFAM: ferredoxin; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; iron hydrogenase, small subunit; hydrogenase large subunit domain protein; KEGG: pca:Pcar_1605 NADH:ubiquinone oxidoreductase subunit; hydrogenase, Fe-only	673832..675580	Alkaliphilus metalliredigens QYMF	5310684
YP_001318526.1	CDS	Amet_0642	NC_009633.1	675692	677662	R	TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: bha:BH2945 hypothetical protein; TRAP transporter, 4TM/12TM fusion protein	complement(675692..677662)	Alkaliphilus metalliredigens QYMF	5310685
YP_001318527.1	CDS	Amet_0643	NC_009633.1	677804	678793	R	TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: bcl:ABC4041 TRAP-type transport system substrate-binding protein; TRAP transporter solute receptor TAXI family protein	complement(677804..678793)	Alkaliphilus metalliredigens QYMF	5310686
YP_001318528.1	CDS	Amet_0644	NC_009633.1	678831	679829	R	TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; KEGG: cac:CAC0892 phospho-2-dehydro-3-deoxyheptonate aldolase; phospho-2-dehydro-3-deoxyheptonate aldolase	complement(678831..679829)	Alkaliphilus metalliredigens QYMF	5310687
YP_001318529.1	CDS	Amet_0645	NC_009633.1	679943	680149	R	hypothetical protein	complement(679943..680149)	Alkaliphilus metalliredigens QYMF	5310688
YP_001318530.1	CDS	Amet_0646	NC_009633.1	680423	681550	D	PFAM: amino acid-binding ACT domain protein; Prephenate dehydrogenase; NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: mta:Moth_1333 prephenate dehydrogenase; prephenate dehydrogenase	680423..681550	Alkaliphilus metalliredigens QYMF	5310689
YP_001318531.1	CDS	Amet_0647	NC_009633.1	681534	682811	D	TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); KEGG: gme:Gmet_0864 3-phosphoshikimate 1-carboxyvinyltransferase; 3-phosphoshikimate 1-carboxyvinyltransferase	681534..682811	Alkaliphilus metalliredigens QYMF	5310690
YP_001318532.1	CDS	Amet_0648	NC_009633.1	682844	683671	D	PFAM: prephenate dehydratase; KEGG: mtp:Mthe_0937 prephenate dehydratase; prephenate dehydratase	682844..683671	Alkaliphilus metalliredigens QYMF	5310691
YP_001318533.1	CDS	Amet_0649	NC_009633.1	683684	684826	D	catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase	683684..684826	Alkaliphilus metalliredigens QYMF	5310692
YP_001318534.1	CDS	Amet_0650	NC_009633.1	684802	685872	D	PFAM: 3-dehydroquinate synthase; KEGG: tte:TTE1011 3-dehydroquinate synthetase; 3-dehydroquinate synthase	684802..685872	Alkaliphilus metalliredigens QYMF	5310693
YP_001318535.1	CDS	Amet_0651	NC_009633.1	685897	686706	D	TIGRFAM: chorismate mutase; PFAM: shikimate kinase; Chorismate mutase; KEGG: tte:TTE1275 Shikimate kinase; chorismate mutase	685897..686706	Alkaliphilus metalliredigens QYMF	5310694
YP_001318536.1	CDS	Amet_0652	NC_009633.1	686789	688171	R	TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: cth:Cthe_0178 argininosuccinate lyase; argininosuccinate lyase	complement(686789..688171)	Alkaliphilus metalliredigens QYMF	5310695
YP_001318537.1	CDS	Amet_0653	NC_009633.1	688168	689412	R	PFAM: argininosuccinate synthase; KEGG: dsy:DSY0785 hypothetical protein; argininosuccinate synthase	complement(688168..689412)	Alkaliphilus metalliredigens QYMF	5310696
YP_001318538.1	CDS	Amet_0654	NC_009633.1	689618	690052	R	PFAM: NLP/P60 protein; KEGG: sfr:Sfri_3992 NLP/P60 protein; NLP/P60 protein	complement(689618..690052)	Alkaliphilus metalliredigens QYMF	5310697
YP_001318539.1	CDS	Amet_0655	NC_009633.1	690452	691942	D	PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; KEGG: chy:CHY_0091 sensor histidine kinase; integral membrane sensor signal transduction histidine kinase	690452..691942	Alkaliphilus metalliredigens QYMF	5310698
YP_001318540.1	CDS	Amet_0656	NC_009633.1	691914	692603	D	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cac:CAC0321 response regulator (CheY-like domain, HTH domain); two component transcriptional regulator	691914..692603	Alkaliphilus metalliredigens QYMF	5310699
YP_001318541.1	CDS	Amet_0657	NC_009633.1	692669	693115	D	PFAM: CBS domain containing protein; KEGG: cno:NT01CX_0657 two CBS domain containing protein; hypothetical protein	692669..693115	Alkaliphilus metalliredigens QYMF	5310700
YP_001318542.1	CDS	Amet_0658	NC_009633.1	693217	693516	D	hypothetical protein	693217..693516	Alkaliphilus metalliredigens QYMF	5310701
YP_001318543.1	CDS	Amet_0659	NC_009633.1	693765	695090	D	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: ctc:CTC01211 methyl-accepting chemotaxis protein TlpA; methyl-accepting chemotaxis sensory transducer	693765..695090	Alkaliphilus metalliredigens QYMF	5310702
YP_001318544.1	CDS	Amet_0660	NC_009633.1	695547	696770	D	TIGRFAM: acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: art:Arth_1762 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase	695547..696770	Alkaliphilus metalliredigens QYMF	5310703
YP_001318545.1	CDS	Amet_0661	NC_009633.1	696795	698183	D	PFAM: C4-dicarboxylate anaerobic carrier; AbgT putative transporter; short chain fatty acid transporter; KEGG: bld:BLi00322 YcgA; C4-dicarboxylate anaerobic carrier	696795..698183	Alkaliphilus metalliredigens QYMF	5310704
YP_001318546.1	CDS	Amet_0662	NC_009633.1	698350	699360	R	PFAM: Radical SAM domain protein; KEGG: bcz:BCZK3959 spore photoproduct lyase; radical SAM domain-containing protein	complement(698350..699360)	Alkaliphilus metalliredigens QYMF	5310705
YP_001318547.1	CDS	Amet_0663	NC_009633.1	699563	701326	D	TIGRFAM: PAS sensor protein; PFAM: CBS domain containing protein; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; AAA ATPase; KEGG: bca:BCE_2865 sensory box sigma-54 dependent DNA-binding response regulator; sigma-54 dependent trancsriptional regulator	699563..701326	Alkaliphilus metalliredigens QYMF	5310706
YP_001318548.1	CDS	Amet_0664	NC_009633.1	701706	702881	D	PFAM: Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: sat:SYN_01664 electron transport complex protein, NADH-binding subunit; respiratory-chain NADH dehydrogenase domain-containing protein	701706..702881	Alkaliphilus metalliredigens QYMF	5310707
YP_001318549.1	CDS	Amet_0665	NC_009633.1	703037	704926	D	KEGG: chy:CHY_2391 glycine reductase proprotein GrdE; D-proline reductase	703037..704926	Alkaliphilus metalliredigens QYMF	5310708
YP_001318550.1	CDS	Amet_0666	NC_009633.1	704977	705237	D	hypothetical protein	704977..705237	Alkaliphilus metalliredigens QYMF	5310709
YP_001318551.1	CDS	Amet_0667	NC_009633.1	705234	705689	D	KEGG: ade:Adeh_1149 hypothetical protein; D-proline reductase	705234..705689	Alkaliphilus metalliredigens QYMF	5310710
YP_001318552.1	CDS	Amet_0668	NC_009633.1	705717	705962	D	hypothetical protein	705717..705962	Alkaliphilus metalliredigens QYMF	5310711
YP_001318553.1	CDS	Amet_0669	NC_009633.1	706050	706814	D	D-proline reductase	706050..706814	Alkaliphilus metalliredigens QYMF	5310712
YP_001318554.1	CDS	Amet_0670	NC_009633.1	706830	707294	D	D-proline reductase	706830..707294	Alkaliphilus metalliredigens QYMF	5310713
YP_001318555.1	CDS	Amet_0671	NC_009633.1	707297	708301	D	PFAM: proline racemase; KEGG: tcr:506795.80 proline racemase Pfam: Pro_racemase; proline racemase	707297..708301	Alkaliphilus metalliredigens QYMF	5310714
YP_001318556.1	CDS	Amet_0672	NC_009633.1	708355	709230	D	KEGG: ppr:PBPRA1095 hypothetical integral membrane protein; hypothetical protein	708355..709230	Alkaliphilus metalliredigens QYMF	5310715
YP_001318557.1	CDS	Amet_0673	NC_009633.1	709723	710517	D	TIGRFAM: glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: tte:TTE1277 glutamate 5-kinase; glutamate 5-kinase	709723..710517	Alkaliphilus metalliredigens QYMF	5310716
YP_001318558.1	CDS	Amet_0674	NC_009633.1	710663	712375	D	TIGRFAM: prolyl-tRNA synthetase; PFAM: tRNA synthetase, class II (G, H, P and S); Anticodon-binding domain protein; YbaK/prolyl-tRNA synthetase associated region; KEGG: tte:TTE2319 prolyl-tRNA synthetase; prolyl-tRNA synthetase	710663..712375	Alkaliphilus metalliredigens QYMF	5310717
YP_001318559.1	CDS	Amet_0675	NC_009633.1	712525	713376	R	PFAM: chemotaxis sensory transducer; KEGG: ctc:CTC00703 methyl-accepting chemotaxis-like protein; methyl-accepting chemotaxis sensory transducer	complement(712525..713376)	Alkaliphilus metalliredigens QYMF	5310718
YP_001318560.1	CDS	Amet_0676	NC_009633.1	713703	715310	D	PFAM: gamma-glutamyltranspeptidase; KEGG: oih:OB3267 gamma-glutamyltranspeptidase; gamma-glutamyltransferase	713703..715310	Alkaliphilus metalliredigens QYMF	5310719
YP_001318561.1	CDS	Amet_0677	NC_009633.1	715402	716298	D	PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bld:BLi01170 YisK; 5-carboxymethyl-2-hydroxymuconate delta-isomerase	715402..716298	Alkaliphilus metalliredigens QYMF	5310720
YP_001318562.1	CDS	Amet_0678	NC_009633.1	716403	718634	D	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; MOFRL domain protein; KEGG: tma:TM1585 glycerate kinase, putative; D-isomer specific 2-hydroxyacid dehydrogenase	716403..718634	Alkaliphilus metalliredigens QYMF	5310721
YP_001318563.1	CDS	Amet_0679	NC_009633.1	718697	719932	D	function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain; putative oxidoreductase	718697..719932	Alkaliphilus metalliredigens QYMF	5310722
YP_001318564.1	CDS	Amet_0680	NC_009633.1	720027	721031	D	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: btk:BT9727_3168 quinone oxidoreductase (NADPH:quinone reductase); alcohol dehydrogenase	720027..721031	Alkaliphilus metalliredigens QYMF	5310723
YP_001318565.1	CDS	Amet_0681	NC_009633.1	721271	722125	D	PFAM: molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: sme:SMb20130 putative dehydrogenase protein; FAD-binding molybdopterin dehydrogenase	721271..722125	Alkaliphilus metalliredigens QYMF	5310724
YP_001318566.1	CDS	Amet_0682	NC_009633.1	722129	722608	D	PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: chy:CHY_0691 2Fe-2S iron-sulfur cluster binding domain; 2Fe-2S iron-sulfur cluster binding domain-containing protein	722129..722608	Alkaliphilus metalliredigens QYMF	5310725
YP_001318567.1	CDS	Amet_0683	NC_009633.1	722641	724956	D	PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: nca:Noca_4271 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; molybdopterin binding aldehyde oxidase and xanthine dehydrogenase	722641..724956	Alkaliphilus metalliredigens QYMF	5310726
YP_001318568.1	CDS	Amet_0684	NC_009633.1	725115	726356	D	TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: sth:STH226 uracil permease; uracil-xanthine permease	725115..726356	Alkaliphilus metalliredigens QYMF	5310727
YP_001318569.1	CDS	Amet_0685	NC_009633.1	726658	727893	D	PFAM: purine catabolism PurC domain protein; KEGG: cac:CAC1426 possible transcriptional regulator from leucine-rich protein (LRPR) family; PucR family transcriptional regulator	726658..727893	Alkaliphilus metalliredigens QYMF	5310728
YP_001318570.1	CDS	Amet_0686	NC_009633.1	728076	729026	D	KEGG: efa:EF3009 hypothetical protein; hypothetical protein	728076..729026	Alkaliphilus metalliredigens QYMF	5310729
YP_001318571.1	CDS	Amet_0687	NC_009633.1	729017	730594	D	PFAM: FdrA family protein; KEGG: ecp:ECP_0397 YahF/FdrA-like protein; FdrA family protein	729017..730594	Alkaliphilus metalliredigens QYMF	5310730
YP_001318572.1	CDS	Amet_0688	NC_009633.1	730587	730757	D	KEGG: efa:EF3011 hypothetical protein; hypothetical protein	730587..730757	Alkaliphilus metalliredigens QYMF	5310731
YP_001318573.1	CDS	Amet_0689	NC_009633.1	730808	732085	D	PFAM: protein of unknown function DUF1116; KEGG: mta:Moth_2121 protein of unknown function DUF1116; hypothetical protein	730808..732085	Alkaliphilus metalliredigens QYMF	5310732
YP_001318574.1	CDS	Amet_0690	NC_009633.1	732111	732914	D	PFAM: cyclase family protein; KEGG: hwa:HQ1938A probable cyclase; cyclase family protein	732111..732914	Alkaliphilus metalliredigens QYMF	5310733
YP_001318575.1	CDS	Amet_0691	NC_009633.1	732914	733804	D	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: spo:SPCC965.09 hypothetical protein; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase	732914..733804	Alkaliphilus metalliredigens QYMF	5310734
YP_001318576.1	CDS	Amet_0692	NC_009633.1	733839	735026	D	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: ctc:CTC02087 putative bile acid-inducible operon protein F; formyl-CoA transferase	733839..735026	Alkaliphilus metalliredigens QYMF	5310735
YP_001318577.1	CDS	Amet_0693	NC_009633.1	735278	736663	D	KEGG: sth:STH2473 hypothetical protein; hypothetical protein	735278..736663	Alkaliphilus metalliredigens QYMF	5310736
YP_001318578.1	CDS	Amet_0694	NC_009633.1	736956	738632	D	PFAM: Na+/H+ antiporter NhaC; KEGG: pab:PAB2161 hypothetical protein; Na+/H+ antiporter NhaC	736956..738632	Alkaliphilus metalliredigens QYMF	5310737
YP_001318579.1	CDS	Amet_0695	NC_009633.1	738739	739362	R	hypothetical protein	complement(738739..739362)	Alkaliphilus metalliredigens QYMF	5310738
YP_001318580.1	CDS	Amet_0696	NC_009633.1	739574	741034	R	TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; Citrate transporter; KEGG: dsy:DSY0247 hypothetical protein; anion transporter	complement(739574..741034)	Alkaliphilus metalliredigens QYMF	5310739
YP_001318581.1	CDS	Amet_0697	NC_009633.1	741650	742975	D	TIGRFAM: 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III; KEGG: cac:CAC1427 4-aminobutyrate aminotransferase (PLP-dependent); 4-aminobutyrate aminotransferase	741650..742975	Alkaliphilus metalliredigens QYMF	5310740
YP_001318582.1	CDS	Amet_0698	NC_009633.1	743087	744514	D	PFAM: amino acid permease-associated region; KEGG: csa:Csal_1907 amino acid permease-associated region; amino acid permease-associated protein	743087..744514	Alkaliphilus metalliredigens QYMF	5310741
YP_001318583.1	CDS	Amet_0699	NC_009633.1	744511	746202	D	PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase-like; KEGG: sfu:Sfum_4079 aldehyde ferredoxin oxidoreductase; aldehyde ferredoxin oxidoreductase	744511..746202	Alkaliphilus metalliredigens QYMF	5310742
YP_001318584.1	CDS	Amet_0700	NC_009633.1	746245	747987	R	PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; PAS fold-4 domain protein; SMART: AAA ATPase; KEGG: bcl:ABC0453 transcriptional regulator; sigma-54 dependent trancsriptional regulator	complement(746245..747987)	Alkaliphilus metalliredigens QYMF	5310743
YP_001318585.1	CDS	Amet_0701	NC_009633.1	748291	749037	D	PFAM: protein of unknown function DUF368; KEGG: tma:TM0164 hypothetical protein; hypothetical protein	748291..749037	Alkaliphilus metalliredigens QYMF	5310744
YP_001318586.1	CDS	Amet_0702	NC_009633.1	749241	750362	D	PFAM: PfkB domain protein; KEGG: chy:CHY_0076 kinase, PfkB family; ribokinase-like domain-containing protein	749241..750362	Alkaliphilus metalliredigens QYMF	5310745
YP_001318587.1	CDS	Amet_0703	NC_009633.1	750374	751297	D	PFAM: Indigoidine synthase A family protein; KEGG: tte:TTE0327 uncharacterized enzyme involved in pigment biosynthesis; indigoidine synthase A family protein	750374..751297	Alkaliphilus metalliredigens QYMF	5310746
YP_001318588.1	CDS	Amet_0704	NC_009633.1	751353	752972	R	PFAM: ATP-binding region, ATPase domain protein; KEGG: mta:Moth_1579 signal transduction histidine kinase regulating citrate/malate metabolism; signal transduction histidine kinase regulating citrate/malate metabolism	complement(751353..752972)	Alkaliphilus metalliredigens QYMF	5310747
YP_001318589.1	CDS	Amet_0705	NC_009633.1	753191	753586	D	PFAM: protein of unknown function DUF1292; KEGG: sth:STH1993 hypothetical protein; hypothetical protein	753191..753586	Alkaliphilus metalliredigens QYMF	5310748
YP_001318590.1	CDS	Amet_0706	NC_009633.1	753750	754838	D	PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: cac:CAC0277 HD-GYP hydrolase domain containing protein; metal dependent phosphohydrolase	753750..754838	Alkaliphilus metalliredigens QYMF	5310749
YP_001318591.1	CDS	Amet_0707	NC_009633.1	755065	756798	D	PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: cth:Cthe_1265 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/subunit	755065..756798	Alkaliphilus metalliredigens QYMF	5310750
YP_001318592.1	CDS	Amet_0708	NC_009633.1	756865	757587	D	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: tte:TTE0481 response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain; two component transcriptional regulator	756865..757587	Alkaliphilus metalliredigens QYMF	5310751
YP_001318593.1	CDS	Amet_0709	NC_009633.1	757595	759007	D	PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; KEGG: tte:TTE0482 sensory transduction histidine kinase; integral membrane sensor signal transduction histidine kinase	757595..759007	Alkaliphilus metalliredigens QYMF	5310752
YP_001318594.1	CDS	Amet_0710	NC_009633.1	759101	759661	D	KEGG: cth:Cthe_1229 spore germination protein-like protein; spore germination protein-like protein	759101..759661	Alkaliphilus metalliredigens QYMF	5310753
YP_001318595.1	CDS	Amet_0711	NC_009633.1	759879	760805	D	PFAM: Auxin Efflux Carrier; KEGG: mhu:Mhun_1778 auxin efflux carrier; auxin efflux carrier	759879..760805	Alkaliphilus metalliredigens QYMF	5310754
YP_001318596.1	CDS	Amet_0712	NC_009633.1	760872	762101	D	PFAM: S-layer domain protein; Lytic transglycosylase, catalytic; KEGG: dsy:DSY3348 hypothetical protein; lytic transglycosylase catalytic subunit	760872..762101	Alkaliphilus metalliredigens QYMF	5310755
YP_001318597.1	CDS	Amet_0713	NC_009633.1	762043	762576	R	PFAM: protein of unknown function DUF1256; KEGG: cpr:CPR_2154 putative sporulation protein YyaC; hypothetical protein	complement(762043..762576)	Alkaliphilus metalliredigens QYMF	5310756
YP_001318598.1	CDS	Amet_0714	NC_009633.1	762649	762804	R	hypothetical protein	complement(762649..762804)	Alkaliphilus metalliredigens QYMF	5310757
YP_001318599.1	CDS	Amet_0715	NC_009633.1	763093	763560	D	PFAM: putative small multi-drug export; KEGG: bha:BH1234 small multidrug export related protein; putative small multi-drug export	763093..763560	Alkaliphilus metalliredigens QYMF	5310758
YP_001318600.1	CDS	Amet_0716	NC_009633.1	763939	765123	D	catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase	763939..765123	Alkaliphilus metalliredigens QYMF	5310759
YP_001318601.1	CDS	Amet_0717	NC_009633.1	765332	765904	D	TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; KEGG: swo:Swol_0517 sigma 28 (flagella/sporulation); ECF subfamily RNA polymerase sigma-24 factor	765332..765904	Alkaliphilus metalliredigens QYMF	5310760
YP_001318602.1	CDS	Amet_0718	NC_009633.1	766261	768309	D	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: cac:CAC0250 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer	766261..768309	Alkaliphilus metalliredigens QYMF	5310761
YP_001318603.1	CDS	Amet_0719	NC_009633.1	768514	768735	D	hypothetical protein	768514..768735	Alkaliphilus metalliredigens QYMF	5310762
YP_001318604.1	CDS	Amet_0720	NC_009633.1	768771	768989	D	hypothetical protein	768771..768989	Alkaliphilus metalliredigens QYMF	5310763
YP_001318605.1	CDS	Amet_0721	NC_009633.1	769049	769213	D	KEGG: cno:NT01CX_0746 hypothetical protein; hypothetical protein	769049..769213	Alkaliphilus metalliredigens QYMF	5310764
YP_001318606.1	CDS	Amet_0722	NC_009633.1	769231	771495	D	TIGRFAM: helicase, RecD/TraA family; SMART: Helix-hairpin-helix DNA-binding, class 1; AAA ATPase; KEGG: tte:TTE0489 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member; recombinase D	769231..771495	Alkaliphilus metalliredigens QYMF	5310765
YP_001318607.1	CDS	Amet_0723	NC_009633.1	771594	772322	D	PFAM: phosphoribosyltransferase; KEGG: swo:Swol_0188 phosphoribosyltransferase; phosphoribosyltransferase	771594..772322	Alkaliphilus metalliredigens QYMF	5310766
YP_001318608.1	CDS	Amet_0724	NC_009633.1	772340	772753	D	KEGG: tte:TTE0491 flagellar protein; flagellar protein	772340..772753	Alkaliphilus metalliredigens QYMF	5310767
YP_001318609.1	CDS	Amet_0725	NC_009633.1	772827	773120	D	PFAM: Anti-sigma-28 factor, FlgM family protein; KEGG: swo:Swol_0190 putative anti-sigma-28 factor, FlgM; anti-sigma-28 factor, FlgM family protein	772827..773120	Alkaliphilus metalliredigens QYMF	5310768
YP_001318610.1	CDS	Amet_0726	NC_009633.1	773152	773646	D	KEGG: cth:Cthe_2245 hypothetical protein; hypothetical protein	773152..773646	Alkaliphilus metalliredigens QYMF	5310769
YP_001318611.1	CDS	Amet_0727	NC_009633.1	773663	775144	D	TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: tte:TTE0494 Flagellar hook-associated protein; flagellar hook-associated protein FlgK	773663..775144	Alkaliphilus metalliredigens QYMF	5310770
YP_001318612.1	CDS	Amet_0728	NC_009633.1	775190	776146	D	TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; KEGG: cth:Cthe_2242 flagellar hook-associated protein 3; flagellar hook-associated protein 3	775190..776146	Alkaliphilus metalliredigens QYMF	5310771
YP_001318613.1	CDS	Amet_0729	NC_009633.1	776187	776750	D	KEGG: cth:Cthe_2241 hypothetical protein; hypothetical protein	776187..776750	Alkaliphilus metalliredigens QYMF	5310772
YP_001318614.1	CDS	Amet_0730	NC_009633.1	776959	777447	D	binds to flagellin and appears to stabilize flagellin during flagella assembly; flagellar assembly protein FliW	776959..777447	Alkaliphilus metalliredigens QYMF	5310773
YP_001318615.1	CDS	Amet_0731	NC_009633.1	777447	777674	D	affects carbohydrate metabolism; has regulatory role in many processes; carbon storage regulator	777447..777674	Alkaliphilus metalliredigens QYMF	5310774
YP_001318616.1	CDS	Amet_0732	NC_009633.1	777856	779055	D	PFAM: flagellin domain protein; KEGG: mta:Moth_0760 flagellin-like; flagellin domain-containing protein	777856..779055	Alkaliphilus metalliredigens QYMF	5310775
YP_001318617.1	CDS	Amet_0733	NC_009633.1	779136	780905	D	PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: ctc:CTC01705 sulfatase-domain-containing protein; hypothetical protein	779136..780905	Alkaliphilus metalliredigens QYMF	5310776
YP_001318618.1	CDS	Amet_0734	NC_009633.1	781056	781427	D	KEGG: swo:Swol_0231 hypothetical protein; hypothetical protein	781056..781427	Alkaliphilus metalliredigens QYMF	5310777
YP_001318619.1	CDS	Amet_0735	NC_009633.1	781543	781671	D	hypothetical protein	781543..781671	Alkaliphilus metalliredigens QYMF	5310778
YP_001318620.1	CDS	Amet_0736	NC_009633.1	781695	781928	D	hypothetical protein	781695..781928	Alkaliphilus metalliredigens QYMF	5310779
YP_001318621.1	CDS	Amet_0737	NC_009633.1	782234	782653	D	KEGG: swo:Swol_0231 hypothetical protein; hypothetical protein	782234..782653	Alkaliphilus metalliredigens QYMF	5310780
YP_001318622.1	CDS	Amet_0738	NC_009633.1	782650	782805	D	hypothetical protein	782650..782805	Alkaliphilus metalliredigens QYMF	5310781
YP_001318623.1	CDS	Amet_0739	NC_009633.1	782991	783383	D	TIGRFAM: nucleotidyltransferase substrate binding protein, HI0074 family; PFAM: Nucleotidyltransferase substrate binding protein, HI0074; KEGG: pca:Pcar_0898 hypothetical protein; nucleotidyltransferase substrate binding protein	782991..783383	Alkaliphilus metalliredigens QYMF	5310782
YP_001318624.1	CDS	Amet_0740	NC_009633.1	783383	783694	D	PFAM: DNA polymerase, beta domain protein region; KEGG: csa:Csal_1674 DNA polymerase, beta-like region; DNA polymerase subunit beta	783383..783694	Alkaliphilus metalliredigens QYMF	5310783
YP_001318625.1	CDS	Amet_0741	NC_009633.1	784008	784184	D	KEGG: dsy:DSY0395 hypothetical protein; hypothetical protein	784008..784184	Alkaliphilus metalliredigens QYMF	5310784
YP_001318626.1	CDS	Amet_0742	NC_009633.1	784208	784441	D	hypothetical protein	784208..784441	Alkaliphilus metalliredigens QYMF	5310785
YP_001318627.1	CDS	Amet_0743	NC_009633.1	784597	785463	D	KEGG: dsy:DSY3487 hypothetical protein; hypothetical protein	784597..785463	Alkaliphilus metalliredigens QYMF	5310786
YP_001318628.1	CDS	Amet_0744	NC_009633.1	785653	785850	D	KEGG: dsy:DSY0395 hypothetical protein; hypothetical protein	785653..785850	Alkaliphilus metalliredigens QYMF	5310787
YP_001318629.1	CDS	Amet_0745	NC_009633.1	785874	786068	D	hypothetical protein	785874..786068	Alkaliphilus metalliredigens QYMF	5310788
YP_001318630.1	CDS	Amet_0746	NC_009633.1	786167	786451	D	TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: swo:Swol_1972 prevent-host-death family protein; prevent-host-death family protein	786167..786451	Alkaliphilus metalliredigens QYMF	5310789
YP_001318631.1	CDS	Amet_0747	NC_009633.1	786444	786752	D	TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; KEGG: swo:Swol_1971 hypothetical protein; addiction module antitoxin	786444..786752	Alkaliphilus metalliredigens QYMF	5310790
YP_001318632.1	CDS	Amet_0748	NC_009633.1	786886	787650	D	PFAM: protein of unknown function DUF1568; KEGG: swo:Swol_2192 hypothetical protein; hypothetical protein	786886..787650	Alkaliphilus metalliredigens QYMF	5310791
YP_001318633.1	CDS	Amet_0749	NC_009633.1	787760	788209	D	KEGG: mta:Moth_0505 hypothetical protein; hypothetical protein	787760..788209	Alkaliphilus metalliredigens QYMF	5310792
YP_001318634.1	CDS	Amet_0750	NC_009633.1	788211	788642	D	PFAM: Rubrerythrin; Ferritin, Dps family protein; KEGG: mja:MJ0746 hypothetical protein; rubrerythrin	788211..788642	Alkaliphilus metalliredigens QYMF	5310793
YP_001318635.1	CDS	Amet_0751	NC_009633.1	788786	789025	D	hypothetical protein	788786..789025	Alkaliphilus metalliredigens QYMF	5310794
YP_001318636.1	CDS	Amet_0752	NC_009633.1	789043	789672	R	TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: cac:CAC0853 HD superfamily hydrolase (HD-GYP domain); metal dependent phosphohydrolase	complement(789043..789672)	Alkaliphilus metalliredigens QYMF	5310795
YP_001318637.1	CDS	Amet_0753	NC_009633.1	789910	790278	D	PFAM: helix-turn-helix domain protein; KEGG: chy:CHY_1862 DNA-binding protein; XRE family transcriptional regulator	789910..790278	Alkaliphilus metalliredigens QYMF	5310796
YP_001318638.1	CDS	Amet_0754	NC_009633.1	791156	791350	D	hypothetical protein	791156..791350	Alkaliphilus metalliredigens QYMF	5310797
YP_001318639.1	CDS	Amet_0755	NC_009633.1	791434	791805	D	PFAM: DNA polymerase, beta domain protein region; KEGG: swo:Swol_0499 nucleotidyltransferase domain protein; DNA polymerase subunit beta	791434..791805	Alkaliphilus metalliredigens QYMF	5310798
YP_001318640.1	CDS	Amet_0756	NC_009633.1	791756	792145	D	PFAM: HEPN domain protein; KEGG: swo:Swol_0500 protein if unknown function (DUF712) superfamily; HEPN domain-containing protein	791756..792145	Alkaliphilus metalliredigens QYMF	5310799
YP_001318641.1	CDS	Amet_0757	NC_009633.1	792276	793607	D	PFAM: nucleoside recognition domain protein; KEGG: btk:BT9727_2860 conserved hypothetical protein, possible membrane protein; nucleoside recognition domain-containing protein	792276..793607	Alkaliphilus metalliredigens QYMF	5310800
YP_001318642.1	CDS	Amet_0758	NC_009633.1	793591	793920	R	KEGG: cno:NT01CX_0025 transcription regulator (TetR/AcrR family); hypothetical protein	complement(793591..793920)	Alkaliphilus metalliredigens QYMF	5310801
YP_001318643.1	CDS	Amet_0759	NC_009633.1	793987	795768	D	TIGRFAM: flavocytochrome c; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FMN-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ctc:CTC01488 fumarate reductase flavoprotein subunit; flavocytochrome c	793987..795768	Alkaliphilus metalliredigens QYMF	5310802
YP_001318644.1	CDS	Amet_0760	NC_009633.1	796016	796519	D	PFAM: nitroreductase; KEGG: mta:Moth_1212 nitroreductase; nitroreductase	796016..796519	Alkaliphilus metalliredigens QYMF	5310803
YP_001318645.1	CDS	Amet_0761	NC_009633.1	796717	797559	D	TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: cac:CAC1624 uncharacterized protein from DegV (B.subtilis) family; DegV family protein	796717..797559	Alkaliphilus metalliredigens QYMF	5310804
YP_001318646.1	CDS	Amet_0762	NC_009633.1	797756	798172	D	TIGRFAM: C_GCAxxG_C_C family protein; KEGG: cno:NT01CX_0304 hypothetical protein; C_GCAxxG_C_C family protein	797756..798172	Alkaliphilus metalliredigens QYMF	5310805
YP_001318647.1	CDS	Amet_0763	NC_009633.1	798250	799068	R	PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: cac:CAC2608 trancriptional regulator of AraC family; helix-turn-helix domain-containing protein	complement(798250..799068)	Alkaliphilus metalliredigens QYMF	5310806
YP_001318648.1	CDS	Amet_0764	NC_009633.1	799243	800868	D	PFAM: FAD linked oxidase domain protein; KEGG: cno:NT01CX_1206 oxidoreductase, FAD-binding; D-lactate dehydrogenase	799243..800868	Alkaliphilus metalliredigens QYMF	5310807
YP_001318649.1	CDS	Amet_0765	NC_009633.1	800828	801607	D	PFAM: Electron transfer flavoprotein, alpha/beta-subunit-like; KEGG: cno:NT01CX_1205 electron transfer flavoprotein beta-subunit; electron transfer flavoprotein subunit alpha/beta-like protein	800828..801607	Alkaliphilus metalliredigens QYMF	5310808
YP_001318650.1	CDS	Amet_0766	NC_009633.1	801609	802787	D	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Electron transfer flavoprotein, alpha/beta-subunit-like; Electron transfer flavoprotein, alpha subunit-like; KEGG: cno:NT01CX_1204 electron transfer flavoprotein, alpha subunit; electron transfer flavoprotein subunit alpha-like protein	801609..802787	Alkaliphilus metalliredigens QYMF	5310809
YP_001318651.1	CDS	Amet_0767	NC_009633.1	802842	804074	D	PFAM: sodium/glutamate symporter; KEGG: fnu:FN0205 sodium/glutamate symport carrier protein; sodium/glutamate symporter	802842..804074	Alkaliphilus metalliredigens QYMF	5310810
YP_001318652.1	CDS	Amet_0768	NC_009633.1	804292	804702	D	KEGG: cth:Cthe_2523 hypothetical protein; hypothetical protein	804292..804702	Alkaliphilus metalliredigens QYMF	5310811
YP_001318653.1	CDS	Amet_0769	NC_009633.1	804781	805650	D	PFAM: GCN5-related N-acetyltransferase; KEGG: spn:SP_0590 acetyltransferase, GNAT family; N-acetyltransferase GCN5	804781..805650	Alkaliphilus metalliredigens QYMF	5310812
YP_001318654.1	CDS	Amet_0770	NC_009633.1	805795	807003	R	KEGG: cth:Cthe_0898 metal dependent phosphohydrolase; putative metal dependent phosphohydrolase	complement(805795..807003)	Alkaliphilus metalliredigens QYMF	5310813
YP_001318655.1	CDS	Amet_0771	NC_009633.1	807327	808181	D	PFAM: metal-dependent phosphohydrolase, HD sub domain; Metal-dependent hydrolase HDOD; KEGG: ctc:CTC01693 hypothetical protein; metal dependent phosphohydrolase	807327..808181	Alkaliphilus metalliredigens QYMF	5310814
YP_001318656.1	CDS	Amet_0772	NC_009633.1	808362	809027	D	KEGG: tde:TDE0460 transporter, putative; hypothetical protein	808362..809027	Alkaliphilus metalliredigens QYMF	5310815
YP_001318657.1	CDS	Amet_0773	NC_009633.1	809034	809159	D	hypothetical protein	809034..809159	Alkaliphilus metalliredigens QYMF	5310816
YP_001318658.1	CDS	Amet_0774	NC_009633.1	809160	809726	D	KEGG: gsu:GSU1025 hypothetical protein; hypothetical protein	809160..809726	Alkaliphilus metalliredigens QYMF	5310817
YP_001318659.1	CDS	Amet_0775	NC_009633.1	809830	810378	D	TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase, HXTX; KEGG: cth:Cthe_0503 2'-5' RNA ligase; 2'-5' RNA ligase	809830..810378	Alkaliphilus metalliredigens QYMF	5310818
YP_001318660.1	CDS	Amet_0776	NC_009633.1	810417	810968	R	PFAM: VanZ family protein; KEGG: swo:Swol_0743 hypothetical protein; VanZ family protein	complement(810417..810968)	Alkaliphilus metalliredigens QYMF	5310819
YP_001318661.1	CDS	Amet_0777	NC_009633.1	811024	812655	R	PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: cth:Cthe_0611 RNA-metabolising metallo-beta-lactamase; RNA-metabolising metallo-beta-lactamase	complement(811024..812655)	Alkaliphilus metalliredigens QYMF	5310820
YP_001318662.1	CDS	Amet_0778	NC_009633.1	813031	813717	D	hypothetical protein	813031..813717	Alkaliphilus metalliredigens QYMF	5310821
YP_001318663.1	CDS	Amet_0779	NC_009633.1	814146	815129	D	TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: bha:BH2947 immunogenic protein; TRAP transporter solute receptor TAXI family protein	814146..815129	Alkaliphilus metalliredigens QYMF	5310822
YP_001318664.1	CDS	Amet_0780	NC_009633.1	815169	815654	D	PFAM: Domain of unknown function DUF1850; KEGG: bha:BH2946 hypothetical protein; hypothetical protein	815169..815654	Alkaliphilus metalliredigens QYMF	5310823
YP_001318665.1	CDS	Amet_0781	NC_009633.1	815660	817606	D	TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: bha:BH2945 hypothetical protein; TRAP transporter, 4TM/12TM fusion protein	815660..817606	Alkaliphilus metalliredigens QYMF	5310824
YP_001318666.1	CDS	Amet_0782	NC_009633.1	817840	818184	D	KEGG: swo:Swol_0189 flagellar protein; hypothetical protein	817840..818184	Alkaliphilus metalliredigens QYMF	5310825
YP_001318667.1	CDS	Amet_0783	NC_009633.1	818331	819197	R	PFAM: aminotransferase, class IV; KEGG: cac:CAC2226 enzyme of IlvE/PabC family (branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase); class IV aminotransferase	complement(818331..819197)	Alkaliphilus metalliredigens QYMF	5310826
YP_001318668.1	CDS	Amet_0784	NC_009633.1	819347	819778	D	PFAM: flagellar protein FlaG protein; KEGG: cth:Cthe_2219 flagellar protein FlaG protein; flagellar protein FlaG protein	819347..819778	Alkaliphilus metalliredigens QYMF	5310827
YP_001318669.1	CDS	Amet_0785	NC_009633.1	819838	821514	D	PFAM: flagellar hook-associated protein 2 domain protein; flagellar hook-associated 2 domain protein; flagellin hook IN repeat protein; KEGG: oih:OB2501 flagellar hook-associated protein 2; flagellar hook-associated 2 domain-containing protein	819838..821514	Alkaliphilus metalliredigens QYMF	5310828
YP_001318670.1	CDS	Amet_0786	NC_009633.1	821542	821925	D	PFAM: flagellar protein FliS; KEGG: tte:TTE0506 Flagellar protein; flagellar protein FliS	821542..821925	Alkaliphilus metalliredigens QYMF	5310829
YP_001318671.1	CDS	Amet_0787	NC_009633.1	821931	822419	D	KEGG: cth:Cthe_2216 hypothetical protein; hypothetical protein	821931..822419	Alkaliphilus metalliredigens QYMF	5310830
YP_001318672.1	CDS	Amet_0788	NC_009633.1	823533	824066	D	TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: ctc:CTC00325 SSU ribosomal protein S30P; sigma 54 modulation protein/ribosomal protein S30EA	823533..824066	Alkaliphilus metalliredigens QYMF	5310831
YP_001318673.1	CDS	Amet_0789	NC_009633.1	824295	824906	D	KEGG: tte:TTE0519 hypothetical protein; hypothetical protein	824295..824906	Alkaliphilus metalliredigens QYMF	5310832
YP_001318674.1	CDS	secA	NC_009633.1	825042	827717	D	functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA	825042..827717	Alkaliphilus metalliredigens QYMF	5310833
YP_001318675.1	CDS	Amet_0791	NC_009633.1	827867	828856	D	TIGRFAM: peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: tte:TTE0523 Protein chain release factor B; peptide chain release factor 2	827867..828856	Alkaliphilus metalliredigens QYMF	5310834
YP_001318676.1	CDS	Amet_0792	NC_009633.1	828951	829400	R	PFAM: protein of unknown function DUF327; KEGG: tte:TTE0096 hypothetical protein; hypothetical protein	complement(828951..829400)	Alkaliphilus metalliredigens QYMF	5310835
YP_001318677.1	CDS	Amet_0793	NC_009633.1	829579	832776	D	KEGG: ddi:DDBDRAFT_0188916 hypothetical protein; hypothetical protein	829579..832776	Alkaliphilus metalliredigens QYMF	5310836
YP_001318678.1	CDS	Amet_0794	NC_009633.1	832788	833078	D	KEGG: cth:Cthe_0759 flagellar biosynthesis; flagellar biosynthesis protein	832788..833078	Alkaliphilus metalliredigens QYMF	5310837
YP_001318679.1	CDS	Amet_0795	NC_009633.1	833149	834027	D	PFAM: flagellin domain protein; KEGG: bha:BH3616 flagellin; flagellin domain-containing protein	833149..834027	Alkaliphilus metalliredigens QYMF	5310838
YP_001318680.1	CDS	Amet_0796	NC_009633.1	834054	834533	D	KEGG: gme:Gmet_0445 flagellar protein FliS; flagellin-specific chaperone FliS-like protein	834054..834533	Alkaliphilus metalliredigens QYMF	5310839
YP_001318681.1	CDS	Amet_0797	NC_009633.1	834683	836578	D	PFAM: sulfatase; KEGG: tma:TM1703 hypothetical protein; sulfatase	834683..836578	Alkaliphilus metalliredigens QYMF	5310840
YP_001318682.1	CDS	Amet_0798	NC_009633.1	836670	837371	D	KEGG: bld:BLi00261 hypothetical protein; hypothetical protein	836670..837371	Alkaliphilus metalliredigens QYMF	5310841
YP_001318683.1	CDS	Amet_0799	NC_009633.1	837481	839667	D	PFAM: RNA binding S1 domain protein; SMART: Resolvase, RNase H domain protein fold; KEGG: cth:Cthe_1955 RNA binding S1; RNA-binding S1 domain-containing protein	837481..839667	Alkaliphilus metalliredigens QYMF	5310842
YP_001318684.1	CDS	Amet_0800	NC_009633.1	839718	841022	D	PFAM: major facilitator superfamily MFS_1; KEGG: dar:Daro_3345 major facilitator superfamily MFS_1; major facilitator superfamily transporter	839718..841022	Alkaliphilus metalliredigens QYMF	5310843
YP_001318685.1	CDS	Amet_0801	NC_009633.1	841121	841615	D	KEGG: mta:Moth_0901 hypothetical protein; hypothetical protein	841121..841615	Alkaliphilus metalliredigens QYMF	5310844
YP_001318686.1	CDS	Amet_0802	NC_009633.1	841973	842563	D	KEGG: tte:TTE0534 hypothetical protein; hypothetical protein	841973..842563	Alkaliphilus metalliredigens QYMF	5310845
YP_001318687.1	CDS	Amet_0803	NC_009633.1	842933	843391	D	PFAM: protein of unknown function UPF0079; KEGG: dps:DP1956 hypothetical protein; hypothetical protein	842933..843391	Alkaliphilus metalliredigens QYMF	5310846
YP_001318688.1	CDS	Amet_0804	NC_009633.1	843388	844098	D	PFAM: peptidase M22, glycoprotease; KEGG: cno:NT01CX_0503 glycoprotease family protein; peptidase M22, glycoprotease	843388..844098	Alkaliphilus metalliredigens QYMF	5310847
YP_001318689.1	CDS	Amet_0805	NC_009633.1	844105	844551	D	TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: tte:TTE0537 Acetyltransferases; ribosomal-protein-alanine acetyltransferase	844105..844551	Alkaliphilus metalliredigens QYMF	5310848
YP_001318690.1	CDS	Amet_0806	NC_009633.1	844554	845204	D	KEGG: bth:BT_0860 putative ABC transporter ATP-binding protein; peptide ABC transporter ATPase	844554..845204	Alkaliphilus metalliredigens QYMF	5310849
YP_001318691.1	CDS	Amet_0807	NC_009633.1	845247	845426	R	hypothetical protein	complement(845247..845426)	Alkaliphilus metalliredigens QYMF	5310850
YP_001318692.1	CDS	Amet_0808	NC_009633.1	845868	846947	D	in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; putative DNA-binding/iron metalloprotein/AP endonuclease	845868..846947	Alkaliphilus metalliredigens QYMF	5310851
YP_001318693.1	CDS	Amet_0809	NC_009633.1	847334	847507	D	hypothetical protein	847334..847507	Alkaliphilus metalliredigens QYMF	5310852
YP_001318694.1	CDS	Amet_0810	NC_009633.1	847803	849725	R	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cno:NT01CX_0476 ABC transporter, ATP-binding protein; ABC transporter-like protein	complement(847803..849725)	Alkaliphilus metalliredigens QYMF	5310853
YP_001318695.1	CDS	Amet_0811	NC_009633.1	850112	850756	D	modulates transcription in response to the NADH/NAD(+) redox state; redox-sensing transcriptional repressor Rex	850112..850756	Alkaliphilus metalliredigens QYMF	5310854
YP_001318696.1	CDS	Amet_0812	NC_009633.1	850807	851274	D	PFAM: regulatory protein, MarR; KEGG: cpf:CPF_1323 transcriptional regulator, MarR family; MarR family transcriptional regulator	850807..851274	Alkaliphilus metalliredigens QYMF	5310855
YP_001318697.1	CDS	Amet_0813	NC_009633.1	851316	851486	R	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: cth:Cthe_2103 4Fe-4S ferredoxin, iron-sulfur binding; 4Fe-4S ferredoxin	complement(851316..851486)	Alkaliphilus metalliredigens QYMF	5310856
YP_001318698.1	CDS	Amet_0814	NC_009633.1	851712	852527	D	KEGG: cth:Cthe_2070 hypothetical protein; hypothetical protein	851712..852527	Alkaliphilus metalliredigens QYMF	5310857
YP_001318699.1	CDS	Amet_0815	NC_009633.1	852782	854035	D	PFAM: Glu/Leu/Phe/Val dehydrogenase, C terminal; Glu/Leu/Phe/Val dehydrogenase, dimerisation region; KEGG: nme:NMB1476 glutamate dehydrogenase, NAD-specific; Glu/Leu/Phe/Val dehydrogenase	852782..854035	Alkaliphilus metalliredigens QYMF	5310858
YP_001318700.1	CDS	Amet_0816	NC_009633.1	854121	854318	R	hypothetical protein	complement(854121..854318)	Alkaliphilus metalliredigens QYMF	5310859
YP_001318701.1	CDS	Amet_0817	NC_009633.1	854940	856628	D	TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: dvl:Dvul_0784 L-lactate transport; L-lactate transport	854940..856628	Alkaliphilus metalliredigens QYMF	5310860
YP_001318702.1	CDS	Amet_0818	NC_009633.1	856775	857488	D	PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: ctc:CTC00971 transcriptional regulator, putative pyruvate dehydrogenase complex repressor; GntR family transcriptional regulator	856775..857488	Alkaliphilus metalliredigens QYMF	5310861
YP_001318703.1	CDS	Amet_0819	NC_009633.1	857771	858559	D	PFAM: Electron transfer flavoprotein, alpha/beta-subunit-like; KEGG: cno:NT01CX_1610 electron-transferring flavoprotein small chain; electron transfer flavoprotein subunit alpha/beta-like protein	857771..858559	Alkaliphilus metalliredigens QYMF	5310862
YP_001318704.1	CDS	Amet_0820	NC_009633.1	858581	859807	D	PFAM: Electron transfer flavoprotein, alpha/beta-subunit-like; Electron transfer flavoprotein, alpha subunit-like; KEGG: ctc:CTC00974 electron transfer flavoprotein alpha-subunit; electron transfer flavoprotein subunit alpha-like protein	858581..859807	Alkaliphilus metalliredigens QYMF	5310863
YP_001318705.1	CDS	Amet_0821	NC_009633.1	859821	861215	D	PFAM: FAD linked oxidase domain protein; KEGG: cac:CAC2542 FAD/FMN-containing dehydrogenase; FAD linked oxidase domain-containing protein	859821..861215	Alkaliphilus metalliredigens QYMF	5310864
YP_001318706.1	CDS	Amet_0822	NC_009633.1	861378	861749	D	PFAM: protein of unknown function DUF77; KEGG: mta:Moth_2497 protein of unknown function DUF77; hypothetical protein	861378..861749	Alkaliphilus metalliredigens QYMF	5310865
YP_001318707.1	CDS	Amet_0823	NC_009633.1	861896	862618	D	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tte:TTE0848 ABC-type multidrug transport system, ATPase component; ABC transporter-like protein	861896..862618	Alkaliphilus metalliredigens QYMF	5310866
YP_001318708.1	CDS	Amet_0824	NC_009633.1	862618	864300	D	KEGG: swo:Swol_2039 hypothetical protein; hypothetical protein	862618..864300	Alkaliphilus metalliredigens QYMF	5310867
YP_001318709.1	CDS	Amet_0825	NC_009633.1	864615	865373	D	PFAM: regulatory protein, DeoR; Helix-turn-helix, type 11 domain protein; KEGG: cac:CAC0231 transcripcional regulator of sugar metabolism; DeoR family transcriptional regulator	864615..865373	Alkaliphilus metalliredigens QYMF	5310868
YP_001318710.1	CDS	Amet_0826	NC_009633.1	865396	866325	D	PFAM: PfkB domain protein; KEGG: cac:CAC0232 1-phosphofructokinase (fructoso 1-phosphate kinase); 1-phosphofructokinase	865396..866325	Alkaliphilus metalliredigens QYMF	5310869
YP_001318711.1	CDS	Amet_0827	NC_009633.1	866331	866786	D	TIGRFAM: PTS system, fructose subfamily, IIA subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; KEGG: cac:CAC0233 PTS system, IIA component; putative PTS IIA-like nitrogen-regulatory protein PtsN	866331..866786	Alkaliphilus metalliredigens QYMF	5310870
YP_001318712.1	CDS	Amet_0828	NC_009633.1	866896	868302	D	TIGRFAM: PTS system, fructose-specific, IIB subunnit; PTS system, fructose subfamily, IIC subunit; PFAM: phosphotransferase system, EIIC; phosphotransferase system PTS, fructose-specific IIB subunit; KEGG: tte:TTE2585 phosphotransferase system, fructose-specific IIC component; PTS system fructose subfamily transporter subunit IIC	866896..868302	Alkaliphilus metalliredigens QYMF	5310871
YP_001318713.1	CDS	Amet_0829	NC_009633.1	868519	869862	D	PFAM: Propeptide, PepSY amd peptidase M4; peptidase	868519..869862	Alkaliphilus metalliredigens QYMF	5310872
YP_001318714.1	CDS	Amet_0830	NC_009633.1	869852	870373	D	PFAM: GCN5-related N-acetyltransferase; KEGG: btk:BT9727_2948 possible streptothricin acetyltransferase; N-acetyltransferase GCN5	869852..870373	Alkaliphilus metalliredigens QYMF	5310873
YP_001318715.1	CDS	Amet_0831	NC_009633.1	870401	871291	D	PFAM: HhH-GPD family protein; 8-oxoguanine DNA glycosylase domain protein; KEGG: cno:NT01CX_0465 8-oxoguanine-DNA-glycosylase, putative; 8-oxoguanine DNA glycosylase	870401..871291	Alkaliphilus metalliredigens QYMF	5310874
YP_001318716.1	CDS	Amet_0832	NC_009633.1	871329	872045	D	PFAM: protein of unknown function DUF554; KEGG: tte:TTE0575 uncharacterized membrane protein, possible Na+ channel or pump; hypothetical protein	871329..872045	Alkaliphilus metalliredigens QYMF	5310875
YP_001318717.1	CDS	groES	NC_009633.1	872333	872617	D	10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES	872333..872617	Alkaliphilus metalliredigens QYMF	5310876
YP_001318718.1	CDS	groEL	NC_009633.1	872700	874343	D	60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL	872700..874343	Alkaliphilus metalliredigens QYMF	5310877
YP_001318719.1	CDS	Amet_0835	NC_009633.1	874445	875593	R	PFAM: phage integrase family protein; KEGG: cth:Cthe_2455 phage integrase; phage integrase family protein	complement(874445..875593)	Alkaliphilus metalliredigens QYMF	5310878
YP_001318720.1	CDS	Amet_0836	NC_009633.1	875598	875756	R	hypothetical protein	complement(875598..875756)	Alkaliphilus metalliredigens QYMF	5310879
YP_001318721.1	CDS	Amet_0837	NC_009633.1	875815	876273	R	PFAM: protein of unknown function DUF955; KEGG: ctc:CTC01069 GP23-like protein; hypothetical protein	complement(875815..876273)	Alkaliphilus metalliredigens QYMF	5310880
YP_001318722.1	CDS	Amet_0838	NC_009633.1	876294	876698	R	PFAM: helix-turn-helix domain protein; KEGG: bce:BC3704 LexA repressor; helix-turn-helix domain-containing protein	complement(876294..876698)	Alkaliphilus metalliredigens QYMF	5310881
YP_001318723.1	CDS	Amet_0839	NC_009633.1	876843	877055	D	KEGG: bce:BC3703 phage protein; phage protein	876843..877055	Alkaliphilus metalliredigens QYMF	5310882
YP_001318724.1	CDS	Amet_0840	NC_009633.1	877089	877334	D	hypothetical protein	877089..877334	Alkaliphilus metalliredigens QYMF	5310883
YP_001318725.1	CDS	Amet_0841	NC_009633.1	877352	878182	D	PFAM: BRO domain protein; KEGG: ctc:CTC01071 KilA protein, putative phage-related DNA binding protein; prophage antirepressor	877352..878182	Alkaliphilus metalliredigens QYMF	5310884
YP_001318726.1	CDS	Amet_0842	NC_009633.1	878333	879253	D	KEGG: cno:NT01CX_2190 phage protein; phage protein	878333..879253	Alkaliphilus metalliredigens QYMF	5310885
YP_001318727.1	CDS	Amet_0843	NC_009633.1	879259	879513	D	hypothetical protein	879259..879513	Alkaliphilus metalliredigens QYMF	5310886
YP_001318728.1	CDS	Amet_0844	NC_009633.1	880432	881706	D	hypothetical protein	880432..881706	Alkaliphilus metalliredigens QYMF	5310887
YP_001318729.1	CDS	Amet_0845	NC_009633.1	881699	882223	D	hypothetical protein	881699..882223	Alkaliphilus metalliredigens QYMF	5310888
YP_001318730.1	CDS	Amet_0846	NC_009633.1	882211	884166	D	KEGG: lwe:lwe1074 hypothetical protein; hypothetical protein	882211..884166	Alkaliphilus metalliredigens QYMF	5310889
YP_001318731.1	CDS	hsdR	NC_009633.1	887144	890404	D	restriction endonuclease; the EcoKI enzyme recognizes 5'-AACN(6)GTGC-3'; subunit R is required for both nuclease and ATPase activities; type I restriction enzyme EcoKI subunit R	887144..890404	Alkaliphilus metalliredigens QYMF	5310890
YP_001318732.1	CDS	Amet_0848	NC_009633.1	890404	891822	D	PFAM: N-6 DNA methylase; KEGG: bca:BCE_0841 type I restriction-modification system, M subunit; N-6 DNA methylase	890404..891822	Alkaliphilus metalliredigens QYMF	5310891
YP_001318733.1	CDS	Amet_0849	NC_009633.1	891822	893225	D	PFAM: restriction modification system DNA specificity domain; KEGG: bca:BCE_0842 type I restriction-modification enzyme, S subunit, putative; restriction modification system DNA specificity subunit	891822..893225	Alkaliphilus metalliredigens QYMF	5310892
YP_001318734.1	CDS	Amet_0850	NC_009633.1	893222	894538	D	PFAM: SMC domain protein; KEGG: dvl:Dvul_0855 SMC domain protein; SMC domain-containing protein	893222..894538	Alkaliphilus metalliredigens QYMF	5310893
YP_001318735.1	CDS	Amet_0851	NC_009633.1	894544	895209	D	KEGG: bxe:Bxe_A3669 hypothetical protein; hypothetical protein	894544..895209	Alkaliphilus metalliredigens QYMF	5310894
YP_001318736.1	CDS	Amet_0852	NC_009633.1	895536	896126	D	KEGG: det:DET1563 hypothetical protein; hypothetical protein	895536..896126	Alkaliphilus metalliredigens QYMF	5310895
YP_001318737.1	CDS	Amet_0853	NC_009633.1	896832	897788	D	KEGG: mkm:Mkms_0838 conserved hypothetical protein; hypothetical protein	896832..897788	Alkaliphilus metalliredigens QYMF	5310896
YP_001318738.1	CDS	Amet_0854	NC_009633.1	897868	898431	D	hypothetical protein	897868..898431	Alkaliphilus metalliredigens QYMF	5310897
YP_001318739.1	CDS	Amet_0855	NC_009633.1	898810	899196	D	PFAM: helix-turn-helix domain protein; KEGG: cpf:CPF_1021 DNA-binding protein; helix-turn-helix domain-containing protein	898810..899196	Alkaliphilus metalliredigens QYMF	5310898
YP_001318740.1	CDS	Amet_0856	NC_009633.1	899202	899993	D	PFAM: protein of unknown function DUF955; KEGG: swo:Swol_2003 Zn peptidase-like protein; hypothetical protein	899202..899993	Alkaliphilus metalliredigens QYMF	5310899
YP_001318741.1	CDS	Amet_0857	NC_009633.1	899993	900565	D	hypothetical protein	899993..900565	Alkaliphilus metalliredigens QYMF	5310900
YP_001318742.1	CDS	Amet_0858	NC_009633.1	901085	901426	R	hypothetical protein	complement(901085..901426)	Alkaliphilus metalliredigens QYMF	5310901
YP_001318743.1	CDS	Amet_0859	NC_009633.1	901429	901785	R	hypothetical protein	complement(901429..901785)	Alkaliphilus metalliredigens QYMF	5310902
YP_001318744.1	CDS	Amet_0860	NC_009633.1	901919	902140	R	KEGG: chy:CHY_0145 hypothetical protein; hypothetical protein	complement(901919..902140)	Alkaliphilus metalliredigens QYMF	5310903
YP_001318745.1	CDS	Amet_0861	NC_009633.1	902203	902427	R	hypothetical protein	complement(902203..902427)	Alkaliphilus metalliredigens QYMF	5310904
YP_001318746.1	CDS	Amet_0862	NC_009633.1	902471	902806	R	hypothetical protein	complement(902471..902806)	Alkaliphilus metalliredigens QYMF	5310905
YP_001318747.1	CDS	Amet_0863	NC_009633.1	902837	903196	R	PFAM: protein of unknown function DUF882; Peptidase M15A; KEGG: dde:Dde_1882 hypothetical protein; peptidase M15A	complement(902837..903196)	Alkaliphilus metalliredigens QYMF	5310906
YP_001318748.1	CDS	Amet_0864	NC_009633.1	903351	903641	D	PFAM: LexA DNA-binding domain protein; KEGG: bld:BLi02032 transcriptional repressor of the SOS regulon; RBL05710; LexA family transcriptional regulator	903351..903641	Alkaliphilus metalliredigens QYMF	5310907
YP_001318749.1	CDS	Amet_0865	NC_009633.1	903858	904160	D	hypothetical protein	903858..904160	Alkaliphilus metalliredigens QYMF	5310908
YP_001318750.1	CDS	Amet_0866	NC_009633.1	904516	904974	D	hypothetical protein	904516..904974	Alkaliphilus metalliredigens QYMF	5310909
YP_001318751.1	CDS	Amet_0867	NC_009633.1	904985	906001	D	KEGG: swo:Swol_2426 hypothetical protein; hypothetical protein	904985..906001	Alkaliphilus metalliredigens QYMF	5310910
YP_001318752.1	CDS	Amet_0868	NC_009633.1	908095	909129	D	hypothetical protein	908095..909129	Alkaliphilus metalliredigens QYMF	5310911
YP_001318753.1	CDS	Amet_0869	NC_009633.1	909133	909567	D	TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase; KEGG: cac:CAC1425 dUTP pyrophosphatase; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut	909133..909567	Alkaliphilus metalliredigens QYMF	5310912
YP_001318754.1	CDS	Amet_0870	NC_009633.1	910093	911631	D	PFAM: GerA spore germination protein; KEGG: tte:TTE2555 putative spore germination protein; GerA spore germination protein	910093..911631	Alkaliphilus metalliredigens QYMF	5310913
YP_001318755.1	CDS	Amet_0871	NC_009633.1	911649	912755	D	TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: tte:TTE2554 spore germination protein homolog YndE; spore germination protein	911649..912755	Alkaliphilus metalliredigens QYMF	5310914
YP_001318756.1	CDS	Amet_0872	NC_009633.1	912739	913854	D	PFAM: spore germination B3 GerAC family protein; KEGG: bha:BH2186 hypothetical protein; spore germination B3 GerAC family protein	912739..913854	Alkaliphilus metalliredigens QYMF	5310915
YP_001318757.1	CDS	Amet_0876	NC_009633.1	916539	916931	D	hypothetical protein	916539..916931	Alkaliphilus metalliredigens QYMF	5310919
YP_001318758.1	CDS	Amet_0877	NC_009633.1	916961	917350	D	hypothetical protein	916961..917350	Alkaliphilus metalliredigens QYMF	5310920
YP_001318759.1	CDS	Amet_0878	NC_009633.1	917597	917731	D	hypothetical protein	917597..917731	Alkaliphilus metalliredigens QYMF	5310921
YP_001318760.1	CDS	Amet_0879	NC_009633.1	918054	919010	D	KEGG: mkm:Mkms_0838 conserved hypothetical protein; hypothetical protein	918054..919010	Alkaliphilus metalliredigens QYMF	5310922
YP_001318761.1	CDS	Amet_0880	NC_009633.1	919090	919650	D	hypothetical protein	919090..919650	Alkaliphilus metalliredigens QYMF	5310923
YP_001318762.1	CDS	Amet_0881	NC_009633.1	919970	920356	R	hypothetical protein	complement(919970..920356)	Alkaliphilus metalliredigens QYMF	5310924
YP_001318763.1	CDS	Amet_0882	NC_009633.1	920456	920740	D	hypothetical protein	920456..920740	Alkaliphilus metalliredigens QYMF	5310925
YP_001318764.1	CDS	Amet_0883	NC_009633.1	920765	920977	D	hypothetical protein	920765..920977	Alkaliphilus metalliredigens QYMF	5310926
YP_001318765.1	CDS	Amet_0884	NC_009633.1	921042	921206	D	hypothetical protein	921042..921206	Alkaliphilus metalliredigens QYMF	5310927
YP_001318766.1	CDS	Amet_0885	NC_009633.1	921282	921386	D	hypothetical protein	921282..921386	Alkaliphilus metalliredigens QYMF	5310928
YP_001318767.1	CDS	Amet_0886	NC_009633.1	921836	922141	R	PFAM: helix-turn-helix domain protein; KEGG: cpf:CPF_1604 DNA-binding protein; XRE family transcriptional regulator	complement(921836..922141)	Alkaliphilus metalliredigens QYMF	5310929
YP_001318768.1	CDS	Amet_0887	NC_009633.1	922636	923241	R	hypothetical protein	complement(922636..923241)	Alkaliphilus metalliredigens QYMF	5310930
YP_001318769.1	CDS	Amet_0888	NC_009633.1	923688	924422	D	PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: bsu:BG13508 similar to transcriptional regulator (AraC/XylS family); helix-turn-helix domain-containing protein	923688..924422	Alkaliphilus metalliredigens QYMF	5310931
YP_001318770.1	CDS	Amet_0889	NC_009633.1	924517	925422	D	PFAM: protein of unknown function DUF6, transmembrane; KEGG: bld:BLi00477 similar to proteins; RBL01685; hypothetical protein	924517..925422	Alkaliphilus metalliredigens QYMF	5310932
YP_001318771.1	CDS	Amet_0890	NC_009633.1	925511	925840	D	TIGRFAM: export-related chaperone CsaA; PFAM: t-RNA-binding domain protein; KEGG: bcz:pE33L466_0260 protein secretion chaperonin; export-related chaperone CsaA	925511..925840	Alkaliphilus metalliredigens QYMF	5310933
YP_001318772.1	CDS	Amet_0891	NC_009633.1	926663	927442	D	TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase, type 3; KEGG: btl:BALH_3597 hydrolase, haloacid dehalogenase-like family; cof family hydrolase	926663..927442	Alkaliphilus metalliredigens QYMF	5310934
YP_001318773.1	CDS	Amet_0892	NC_009633.1	927783	928766	D	PFAM: PfkB domain protein; KEGG: gka:GK1957 2-keto-3-deoxy-gluconate kinase; ribokinase-like domain-containing protein	927783..928766	Alkaliphilus metalliredigens QYMF	5310935
YP_001318774.1	CDS	Amet_0893	NC_009633.1	928866	929261	D	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sus:Acid_1152 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase	928866..929261	Alkaliphilus metalliredigens QYMF	5310936
YP_001318775.1	CDS	Amet_0894	NC_009633.1	929653	930768	D	PFAM: ABC transporter related; TOBE domain protein; transport-associated protein OB domain protein; SMART: AAA ATPase; KEGG: cno:NT01CX_0964 ABC transporter (TOBE domain and ATPase domain); ABC transporter-like protein	929653..930768	Alkaliphilus metalliredigens QYMF	5310937
YP_001318776.1	CDS	Amet_0895	NC_009633.1	930783	931853	D	PFAM: glycosyl hydrolase, family 88; KEGG: cac:CAC0359 similar to YteR (Bacilus subtilis); glycosyl hydrolase family protein	930783..931853	Alkaliphilus metalliredigens QYMF	5310938
YP_001318777.1	CDS	Amet_0896	NC_009633.1	931973	933298	D	PFAM: extracellular solute-binding protein, family 1; KEGG: yps:YPTB2362 putative ABC type periplasmic sugar-binding protein; extracellular solute-binding protein	931973..933298	Alkaliphilus metalliredigens QYMF	5310939
YP_001318778.1	CDS	Amet_0897	NC_009633.1	933351	934235	D	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA2403 binding-protein-dependent transport system, inner membrane component; binding-protein-dependent transport system inner membrane protein	933351..934235	Alkaliphilus metalliredigens QYMF	5310940
YP_001318779.1	CDS	Amet_0898	NC_009633.1	934232	935164	D	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yps:YPTB2360 putative sugar ABC transporter (permease); binding-protein-dependent transport system inner membrane protein	934232..935164	Alkaliphilus metalliredigens QYMF	5310941
YP_001318780.1	CDS	Amet_0899	NC_009633.1	935170	936729	D	PFAM: glycoside hydrolase, family 28; KEGG: cac:CAC0355 putative polygalacturonase (pectinase); glycoside hydrolase	935170..936729	Alkaliphilus metalliredigens QYMF	5310942
YP_001318781.1	CDS	Amet_0900	NC_009633.1	936755	937588	D	4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2,5-hexodiulosonate; 5-keto-4-deoxyuronate isomerase	936755..937588	Alkaliphilus metalliredigens QYMF	5310943
YP_001318782.1	CDS	Amet_0901	NC_009633.1	937685	938464	D	PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: cpr:CPR_0392 2-deoxy-D-gluconate 3-dehydrogenase; short-chain dehydrogenase/reductase SDR	937685..938464	Alkaliphilus metalliredigens QYMF	5310944
YP_001318783.1	CDS	Amet_0902	NC_009633.1	938593	939603	D	PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: cac:CAC0693 transcriptional regulator of the LacI family; alanine racemase	938593..939603	Alkaliphilus metalliredigens QYMF	5310945
YP_001318784.1	CDS	Amet_0904	NC_009633.1	940239	941483	D	KEGG: mta:Moth_0427 hypothetical protein; hypothetical protein	940239..941483	Alkaliphilus metalliredigens QYMF	5310947
YP_001318785.1	CDS	Amet_0905	NC_009633.1	941597	941881	R	PFAM: Coat F domain protein; KEGG: cac:CAC2683 related to spore coat protein F; coat F domain-containing protein	complement(941597..941881)	Alkaliphilus metalliredigens QYMF	5310948
YP_001318786.1	CDS	Amet_0906	NC_009633.1	941940	942179	R	KEGG: cac:CAC2682 hypothetical protein; hypothetical protein	complement(941940..942179)	Alkaliphilus metalliredigens QYMF	5310949
YP_001318787.1	CDS	Amet_0907	NC_009633.1	942674	943768	D	PFAM: aldo/keto reductase; KEGG: cth:Cthe_0236 aldo/keto reductase; aldo/keto reductase	942674..943768	Alkaliphilus metalliredigens QYMF	5310950
YP_001318788.1	CDS	Amet_0908	NC_009633.1	943784	944182	D	KEGG: cth:Cthe_2252 thioesterase family protein; thioesterase family protein	943784..944182	Alkaliphilus metalliredigens QYMF	5310951
YP_001318789.1	CDS	Amet_0909	NC_009633.1	944538	945995	D	TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: CBS domain containing protein; IMP dehydrogenase/GMP reductase; KEGG: chy:CHY_1176 inosine-5'-monophosphate dehydrogenase; inosine-5'-monophosphate dehydrogenase	944538..945995	Alkaliphilus metalliredigens QYMF	5310952
YP_001318790.1	CDS	guaA	NC_009633.1	946012	947544	D	contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase	946012..947544	Alkaliphilus metalliredigens QYMF	5310953
YP_001318791.1	CDS	Amet_0911	NC_009633.1	947695	948114	D	hypothetical protein	947695..948114	Alkaliphilus metalliredigens QYMF	5310954
YP_001318792.1	CDS	Amet_0912	NC_009633.1	948522	948968	D	PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: tte:TTE2462 hypothetical protein; BFD/(2Fe-2S)-binding domain-containing protein	948522..948968	Alkaliphilus metalliredigens QYMF	5310955
YP_001318793.1	CDS	Amet_0913	NC_009633.1	949254	950039	D	PFAM: Ion transport protein; Ion transport 2 domain protein; KEGG: cac:CAC1317 potassium channel subunit; Ion transport 2 domain-containing protein	949254..950039	Alkaliphilus metalliredigens QYMF	5310956
YP_001318794.1	CDS	Amet_0914	NC_009633.1	950152	950826	D	PFAM: copper amine oxidase domain protein; KEGG: cth:Cthe_3188 copper amine oxidase-like protein; copper amine oxidase domain-containing protein	950152..950826	Alkaliphilus metalliredigens QYMF	5310957
YP_001318795.1	CDS	Amet_0916	NC_009633.1	952085	953260	D	TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase subunit; PFAM: ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp; KEGG: tma:TM0447 phosphoribosylaminoimidazole carboxylase ATPase subunit; phosphoribosylaminoimidazole carboxylase ATPase subunit	952085..953260	Alkaliphilus metalliredigens QYMF	5310959
YP_001318796.1	CDS	Amet_0917	NC_009633.1	953356	953868	D	TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; KEGG: pab:PAB1077 phosphoribosylaminoimidazole carboxylase catalytic subunit; phosphoribosylaminoimidazole carboxylase catalytic subunit	953356..953868	Alkaliphilus metalliredigens QYMF	5310960
YP_001318797.1	CDS	Amet_0918	NC_009633.1	953881	954591	D	TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; KEGG: tte:TTE0588 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase; phosphoribosylaminoimidazolesuccinocarboxamide synthase	953881..954591	Alkaliphilus metalliredigens QYMF	5310961
YP_001318798.1	CDS	Amet_0919	NC_009633.1	954605	954847	D	TIGRFAM: phosphoribosylformylglycinamidine synthase, purS; PFAM: phosphoribosylformylglycinamidine synthetase PurS; KEGG: bbk:BARBAKC583_0860 phosphoribosylformylglycinamidine synthase, PurS protein; phosphoribosylformylglycinamidine synthase subunit PurS	954605..954847	Alkaliphilus metalliredigens QYMF	5310962
YP_001318799.1	CDS	Amet_0920	NC_009633.1	954861	955541	D	TIGRFAM: phosphoribosylformylglycinamidine synthase I; PFAM: CobB/CobQ domain protein glutamine amidotransferase; KEGG: gka:GK0262 phosphoribosylformylglycinamidine synthase subunit I; phosphoribosylformylglycinamidine synthase I	954861..955541	Alkaliphilus metalliredigens QYMF	5310963
YP_001318800.1	CDS	Amet_0921	NC_009633.1	955534	957750	D	TIGRFAM: phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: tte:TTE0811 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain; phosphoribosylformylglycinamidine synthase II	955534..957750	Alkaliphilus metalliredigens QYMF	5310964
YP_001318801.1	CDS	Amet_0922	NC_009633.1	957720	959153	D	TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase, class-II; phosphoribosyltransferase; KEGG: cno:NT01CX_2422 amidophosphoribosyltransferase; amidophosphoribosyltransferase	957720..959153	Alkaliphilus metalliredigens QYMF	5310965
YP_001318802.1	CDS	Amet_0923	NC_009633.1	959140	960183	D	catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase	959140..960183	Alkaliphilus metalliredigens QYMF	5310966
YP_001318803.1	CDS	Amet_0924	NC_009633.1	960171	960827	D	TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; KEGG: cth:Cthe_1247 phosphoribosylglycinamide formyltransferase; phosphoribosylglycinamide formyltransferase	960171..960827	Alkaliphilus metalliredigens QYMF	5310967
YP_001318804.1	CDS	purH	NC_009633.1	960808	962334	D	involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	960808..962334	Alkaliphilus metalliredigens QYMF	5310968
YP_001318805.1	CDS	Amet_0926	NC_009633.1	962428	963687	D	catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase	962428..963687	Alkaliphilus metalliredigens QYMF	5310969
YP_001318806.1	CDS	Amet_0927	NC_009633.1	963737	964831	R	KEGG: cac:CA_P0013 FAD dependent dehydrogenase; FAD dependent dehydrogenase	complement(963737..964831)	Alkaliphilus metalliredigens QYMF	5310970
YP_001318807.1	CDS	Amet_0928	NC_009633.1	964853	965086	R	hypothetical protein	complement(964853..965086)	Alkaliphilus metalliredigens QYMF	5310971
YP_001318808.1	CDS	Amet_0929	NC_009633.1	965394	966191	D	PFAM: chemotaxis sensory transducer; KEGG: tte:TTE0646 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer	965394..966191	Alkaliphilus metalliredigens QYMF	5310972
YP_001318809.1	CDS	Amet_0930	NC_009633.1	966401	967231	R	PFAM: NLPA lipoprotein; KEGG: fnu:FN0658 ABC transporter substrate-binding protein; NLPA lipoprotein	complement(966401..967231)	Alkaliphilus metalliredigens QYMF	5310973
YP_001318810.1	CDS	Amet_0931	NC_009633.1	967236	967886	R	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_A0996 ABC methionine transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein	complement(967236..967886)	Alkaliphilus metalliredigens QYMF	5310974
YP_001318811.1	CDS	Amet_0932	NC_009633.1	967886	968683	R	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vfi:VF0686 methionine transport ATP-binding protein; ABC transporter-like protein	complement(967886..968683)	Alkaliphilus metalliredigens QYMF	5310975
YP_001318812.1	CDS	Amet_0933	NC_009633.1	968801	968971	D	hypothetical protein	968801..968971	Alkaliphilus metalliredigens QYMF	5310976
YP_001318813.1	CDS	Amet_0934	NC_009633.1	969109	969414	D	TIGRFAM: TrpR like protein, YerC/YecD; PFAM: Trp repressor; KEGG: cth:Cthe_1388 TrpR like protein, YerC/YecD; TrpR-like protein YerC/YecD	969109..969414	Alkaliphilus metalliredigens QYMF	5310977
YP_001318814.1	CDS	Amet_0935	NC_009633.1	969515	970735	R	catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; diaminopimelate sensitive; aspartate kinase I	complement(969515..970735)	Alkaliphilus metalliredigens QYMF	5310978
YP_001318815.1	CDS	Amet_0936	NC_009633.1	971017	971226	D	hypothetical protein	971017..971226	Alkaliphilus metalliredigens QYMF	5310979
YP_001318816.1	CDS	Amet_0937	NC_009633.1	971338	971529	D	hypothetical protein	971338..971529	Alkaliphilus metalliredigens QYMF	5310980
YP_001318817.1	CDS	Amet_0938	NC_009633.1	971895	974081	D	TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; metal-dependent phosphohydrolase, HD sub domain; PAS fold-3 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; KEGG: swo:Swol_2483 putative PAS/PAC sensor protein; diguanylate cyclase and metal dependent phosphohydrolase	971895..974081	Alkaliphilus metalliredigens QYMF	5310981
YP_001318818.1	CDS	Amet_0939	NC_009633.1	974385	974558	D	hypothetical protein	974385..974558	Alkaliphilus metalliredigens QYMF	5310982
YP_001318819.1	CDS	Amet_0940	NC_009633.1	974646	976682	D	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: cac:CAC0250 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer	974646..976682	Alkaliphilus metalliredigens QYMF	5310983
YP_001318820.1	CDS	Amet_0941	NC_009633.1	976904	979078	D	TIGRFAM: ATP-dependent DNA helicase PcrA; PFAM: UvrD/REP helicase; KEGG: tte:TTE0604 Superfamily I DNA and RNA helicases; ATP-dependent DNA helicase PcrA	976904..979078	Alkaliphilus metalliredigens QYMF	5310984
YP_001318821.1	CDS	ligA	NC_009633.1	979239	981221	D	this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; NAD-dependent DNA ligase LigA	979239..981221	Alkaliphilus metalliredigens QYMF	5310985
YP_001318822.1	CDS	Amet_0943	NC_009633.1	981462	981635	R	hypothetical protein	complement(981462..981635)	Alkaliphilus metalliredigens QYMF	5310986
YP_001318823.1	CDS	Amet_0944	NC_009633.1	981744	982424	D	TIGRFAM: integral membrane protein TIGR01906; PFAM: Integral membrane protein 1906; KEGG: tte:TTE1993 hypothetical protein; hypothetical protein	981744..982424	Alkaliphilus metalliredigens QYMF	5310987
YP_001318824.1	CDS	Amet_0945	NC_009633.1	982449	982862	R	PFAM: Rubrerythrin; KEGG: cpe:CPE0855 rubrerythrin; rubrerythrin	complement(982449..982862)	Alkaliphilus metalliredigens QYMF	5310988
YP_001318825.1	CDS	Amet_0946	NC_009633.1	983169	983384	D	PFAM: FeoA family protein; FeoA family protein	983169..983384	Alkaliphilus metalliredigens QYMF	5310989
YP_001318826.1	CDS	Amet_0947	NC_009633.1	983385	985148	D	TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; Ferrous iron transport B domain protein; nucleoside recognition domain protein; KEGG: mtp:Mthe_0703 small GTP-binding protein; small GTP-binding protein	983385..985148	Alkaliphilus metalliredigens QYMF	5310990
YP_001318827.1	CDS	Amet_0948	NC_009633.1	985174	985821	D	KEGG: hha:Hhal_1920 hypothetical protein; hypothetical protein	985174..985821	Alkaliphilus metalliredigens QYMF	5310991
YP_001318828.1	CDS	Amet_0949	NC_009633.1	985784	986755	D	PFAM: conserved hypothetical protein 374; KEGG: mst:Msp_1503 conserved hypothetical membrane-spanning protein; hypothetical protein	985784..986755	Alkaliphilus metalliredigens QYMF	5310992
YP_001318829.1	CDS	Amet_0950	NC_009633.1	986840	988225	D	KEGG: gka:GK0660 hypothetical protein; hypothetical protein	986840..988225	Alkaliphilus metalliredigens QYMF	5310993
YP_001318830.1	CDS	Amet_0951	NC_009633.1	988562	989170	D	hypothetical protein	988562..989170	Alkaliphilus metalliredigens QYMF	5310994
YP_001318831.1	CDS	Amet_0952	NC_009633.1	989199	990182	D	PFAM: AIR synthase related protein domain protein; KEGG: cth:Cthe_1060 AIR synthase related protein-like protein; AIR synthase-like protein	989199..990182	Alkaliphilus metalliredigens QYMF	5310995
YP_001318832.1	CDS	Amet_0953	NC_009633.1	990411	992570	D	PFAM: cell wall hydrolase/autolysin; copper amine oxidase domain protein; KEGG: cth:Cthe_0185 cell wall hydrolase/autolysin; N-acetylmuramoyl-L-alanine amidase	990411..992570	Alkaliphilus metalliredigens QYMF	5310996
YP_001318833.1	CDS	Amet_0954	NC_009633.1	992731	993252	D	KEGG: cth:Cthe_2213 hypothetical protein; hypothetical protein	992731..993252	Alkaliphilus metalliredigens QYMF	5310997
YP_001318834.1	CDS	Amet_0955	NC_009633.1	993328	994326	D	KEGG: cth:Cthe_0187 hypothetical protein; hypothetical protein	993328..994326	Alkaliphilus metalliredigens QYMF	5310998
YP_001318835.1	CDS	Amet_0956	NC_009633.1	994496	995263	D	TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; KEGG: tte:TTE0618 RNase PH; ribonuclease PH	994496..995263	Alkaliphilus metalliredigens QYMF	5310999
YP_001318836.1	CDS	Amet_0957	NC_009633.1	995287	995898	D	TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein; KEGG: cth:Cthe_0189 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase	995287..995898	Alkaliphilus metalliredigens QYMF	5311000
YP_001318837.1	CDS	Amet_0958	NC_009633.1	995891	996373	D	TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; KEGG: swo:Swol_0455 hypothetical protein; phosphodiesterase	995891..996373	Alkaliphilus metalliredigens QYMF	5311001
YP_001318838.1	CDS	Amet_0961	NC_009633.1	998600	998851	D	hypothetical protein	998600..998851	Alkaliphilus metalliredigens QYMF	5311011
YP_001318839.1	CDS	Amet_0962	NC_009633.1	998970	999194	D	hypothetical protein	998970..999194	Alkaliphilus metalliredigens QYMF	5311012
YP_001318840.1	CDS	Amet_0963	NC_009633.1	1000939	1006785	D	PFAM: S-layer domain protein; GLUG domain protein; KEGG: swo:Swol_0141 hypothetical protein; S-layer protein	1000939..1006785	Alkaliphilus metalliredigens QYMF	5311013
YP_001318841.1	CDS	Amet_0965	NC_009633.1	1007267	1007668	D	PFAM: transposase IS200-family protein; KEGG: ctc:CTC00621 transposase; transposase IS200-family protein	1007267..1007668	Alkaliphilus metalliredigens QYMF	5311015
YP_001318842.1	CDS	Amet_0966	NC_009633.1	1007665	1008786	D	TIGRFAM: transposase, IS605 OrfB family; PFAM: putative transposase, IS891/IS1136/IS1341 family; transposase, IS605 OrfB; KEGG: bcz:pE33L466_0272 transposase; IS605 family transposase OrfB	1007665..1008786	Alkaliphilus metalliredigens QYMF	5311016
YP_001318843.1	CDS	Amet_0967	NC_009633.1	1009486	1012629	D	TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase, HAMP region domain protein; metal-dependent phosphohydrolase, HD sub domain; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; metal-dependent phosphohydrolase, HD region; KEGG: dsy:DSY1176 hypothetical protein; diguanylate cyclase and metal dependent phosphohydrolase	1009486..1012629	Alkaliphilus metalliredigens QYMF	5311018
YP_001318844.1	CDS	Amet_0968	NC_009633.1	1012924	1013196	D	hypothetical protein	1012924..1013196	Alkaliphilus metalliredigens QYMF	5311019
YP_001318845.1	CDS	Amet_0969	NC_009633.1	1013705	1014757	D	PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: fnu:FN1258 C4-dicarboxylate-binding protein; TRAP dicarboxylate transporter subunit DctP	1013705..1014757	Alkaliphilus metalliredigens QYMF	5311020
YP_001318846.1	CDS	Amet_0970	NC_009633.1	1014901	1015389	D	PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: fnu:FN1257 C4-dicarboxylate transporter small subunit; tripartite ATP-independent periplasmic transporter DctQ	1014901..1015389	Alkaliphilus metalliredigens QYMF	5311021
YP_001318847.1	CDS	Amet_0971	NC_009633.1	1015405	1016691	D	TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: C4-dicarboxylate anaerobic carrier; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: fnu:FN1256 C4-dicarboxylate transporter large subunit; TRAP dicarboxylate transporter subunit DctM	1015405..1016691	Alkaliphilus metalliredigens QYMF	5311022
YP_001318848.1	CDS	Amet_0972	NC_009633.1	1016719	1017510	D	TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: fnu:FN1255 nagD protein; HAD family hydrolase	1016719..1017510	Alkaliphilus metalliredigens QYMF	5311023
YP_001318849.1	CDS	Amet_0973	NC_009633.1	1017685	1019115	D	PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: fnu:FN0183 glycerol-3-phosphate dehydrogenase; FAD dependent oxidoreductase	1017685..1019115	Alkaliphilus metalliredigens QYMF	5311024
YP_001318850.1	CDS	Amet_0974	NC_009633.1	1019148	1020413	D	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: fnu:FN0182 sarcosine oxidase alpha subunit; FAD-dependent pyridine nucleotide-disulfide oxidoreductase	1019148..1020413	Alkaliphilus metalliredigens QYMF	5311025
YP_001318851.1	CDS	Amet_0975	NC_009633.1	1020416	1020829	D	PFAM: protein of unknown function DUF1667; KEGG: cac:CAC1324 uncharacterized predected metal-binding protein; hypothetical protein	1020416..1020829	Alkaliphilus metalliredigens QYMF	5311026
YP_001318852.1	CDS	Amet_0976	NC_009633.1	1020869	1021576	D	PFAM: amino acid-binding ACT domain protein; MgtC/SapB transporter; KEGG: cth:Cthe_1919 MgtC/SapB transporter; MgtC/SapB transporter	1020869..1021576	Alkaliphilus metalliredigens QYMF	5311027
YP_001318853.1	CDS	Amet_0977	NC_009633.1	1021754	1023751	R	PFAM: fructose-1,6-bisphosphatase; KEGG: cac:CAC1572 fructose-1,6-bisphosphatase; fructose-1,6-bisphosphatase	complement(1021754..1023751)	Alkaliphilus metalliredigens QYMF	5311028
YP_001318854.1	CDS	Amet_0978	NC_009633.1	1024268	1024921	D	KEGG: swo:Swol_1999 hypothetical protein; hypothetical protein	1024268..1024921	Alkaliphilus metalliredigens QYMF	5311029
YP_001318855.1	CDS	Amet_0979	NC_009633.1	1024933	1025850	R	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: dsy:DSY4221 hypothetical protein; LysR family transcriptional regulator	complement(1024933..1025850)	Alkaliphilus metalliredigens QYMF	5311030
YP_001318856.1	CDS	Amet_0980	NC_009633.1	1026294	1026497	D	KEGG: cth:Cthe_3092 conserved hypothetical protein, CF-27 family; hypothetical protein	1026294..1026497	Alkaliphilus metalliredigens QYMF	5311031
YP_001318857.1	CDS	Amet_0981	NC_009633.1	1026674	1026991	D	PFAM: regulatory protein, ArsR; KEGG: lin:pli0036 similar to arsenical resistance operon repressor; regulatory protein ArsR	1026674..1026991	Alkaliphilus metalliredigens QYMF	5311032
YP_001318858.1	CDS	Amet_0982	NC_009633.1	1027153	1027332	D	hypothetical protein	1027153..1027332	Alkaliphilus metalliredigens QYMF	5311033
YP_001318859.1	CDS	Amet_0983	NC_009633.1	1027357	1027758	D	PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: cth:Cthe_1110 protein tyrosine phosphatase; protein tyrosine phosphatase	1027357..1027758	Alkaliphilus metalliredigens QYMF	5311034
YP_001318860.1	CDS	Amet_0984	NC_009633.1	1027839	1028912	D	TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: cth:Cthe_1111 bile acid:sodium symporter; arsenical-resistance protein	1027839..1028912	Alkaliphilus metalliredigens QYMF	5311035
YP_001318861.1	CDS	Amet_0985	NC_009633.1	1028953	1029252	D	PFAM: Arsenical resistance operon trans-acting repressor ArsD; KEGG: ser:SERP2427 arsenical resistance operon trans-acting repressor; arsenical resistance operon trans-acting repressor ArsD	1028953..1029252	Alkaliphilus metalliredigens QYMF	5311036
YP_001318862.1	CDS	Amet_0986	NC_009633.1	1029265	1030152	D	TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase; KEGG: hwa:HQ2609A probable arsenite efflux ATPase; arsenite-activated ATPase ArsA	1029265..1030152	Alkaliphilus metalliredigens QYMF	5311037
YP_001318863.1	CDS	Amet_0987	NC_009633.1	1030145	1031035	D	TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase; KEGG: hal:VNG7123 arsenite-transporting ATPase; arsenite-activated ATPase ArsA	1030145..1031035	Alkaliphilus metalliredigens QYMF	5311038
YP_001318864.1	CDS	Amet_0988	NC_009633.1	1031114	1032190	D	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: chy:CHY_0790 tungsten-containing aldehyde ferredoxin oxidoreductase cofactor modifying protein; radical SAM domain-containing protein	1031114..1032190	Alkaliphilus metalliredigens QYMF	5311039
YP_001318865.1	CDS	Amet_0989	NC_009633.1	1032362	1033078	D	KEGG: mta:Moth_2174 molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin-guanine dinucleotide biosynthesis protein A-like protein	1032362..1033078	Alkaliphilus metalliredigens QYMF	5311040
YP_001318866.1	CDS	Amet_0990	NC_009633.1	1033445	1036006	D	PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: dsy:DSY4131 putative anaerobic dehydrogenase; molybdopterin oxidoreductase	1033445..1036006	Alkaliphilus metalliredigens QYMF	5311041
YP_001318867.1	CDS	Amet_0991	NC_009633.1	1036033	1036713	D	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: dsy:DSY4132 putative oxidoreductase iron-sulfur subunit; 4Fe-4S ferredoxin	1036033..1036713	Alkaliphilus metalliredigens QYMF	5311042
YP_001318868.1	CDS	Amet_0992	NC_009633.1	1036786	1037463	D	PFAM: cytoplasmic chaperone TorD family protein; KEGG: dsy:DSY4608 uncharacterized component of anaerobic dehydrogenase; cytoplasmic chaperone TorD family protein	1036786..1037463	Alkaliphilus metalliredigens QYMF	5311043
YP_001318869.1	CDS	Amet_0993	NC_009633.1	1037527	1038609	D	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: dsy:DSY0890 hypothetical protein; 4Fe-4S ferredoxin	1037527..1038609	Alkaliphilus metalliredigens QYMF	5311044
YP_001318870.1	CDS	tatA	NC_009633.1	1038804	1039013	D	TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin arginine translocase protein A	1038804..1039013	Alkaliphilus metalliredigens QYMF	5311045
YP_001318871.1	CDS	Amet_0995	NC_009633.1	1039060	1040082	D	PFAM: molybdopterin binding domain; KEGG: chy:CHY_0621 molybdopterin-binding domain protein; molybdopterin binding domain-containing protein	1039060..1040082	Alkaliphilus metalliredigens QYMF	5311046
YP_001318872.1	CDS	Amet_0996	NC_009633.1	1040094	1041329	D	TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; MoeA domain protein, domain I and II; MoeA domain protein, domain IV; KEGG: bha:BH3021 molybdopterin biosynthesis; molybdenum cofactor synthesis domain-containing protein	1040094..1041329	Alkaliphilus metalliredigens QYMF	5311047
YP_001318873.1	CDS	Amet_0997	NC_009633.1	1041326	1041817	D	TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: mta:Moth_1819 molybdopterin-guanine dinucleotide biosynthesis protein B; molybdopterin-guanine dinucleotide biosynthesis protein MobB	1041326..1041817	Alkaliphilus metalliredigens QYMF	5311048
YP_001318874.1	CDS	Amet_0998	NC_009633.1	1041874	1042044	D	TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: chy:CHY_2570 twin-arginine translocation protein, TatA/E family; twin arginine-targeting protein translocase	1041874..1042044	Alkaliphilus metalliredigens QYMF	5311049
YP_001318875.1	CDS	Amet_0999	NC_009633.1	1042109	1042828	D	TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: sfu:Sfum_0692 sec-independent protein translocase, TatC subunit; Sec-independent protein translocase subunit TatC	1042109..1042828	Alkaliphilus metalliredigens QYMF	5311050
YP_001318876.1	CDS	Amet_1000	NC_009633.1	1042896	1043681	D	involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth; formate dehydrogenase accessory protein	1042896..1043681	Alkaliphilus metalliredigens QYMF	5311051
YP_001318877.1	CDS	Amet_1001	NC_009633.1	1043835	1045943	R	PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH, type 1, domain protein; SMART: KH domain protein; KEGG: tte:TTE1387 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase); polynucleotide phosphorylase/polyadenylase	complement(1043835..1045943)	Alkaliphilus metalliredigens QYMF	5311052
YP_001318878.1	CDS	Amet_1002	NC_009633.1	1046348	1046956	R	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bha:BH0418 unknown conserved protein in others; type 12 methyltransferase	complement(1046348..1046956)	Alkaliphilus metalliredigens QYMF	5311053
YP_001318879.1	CDS	Amet_1003	NC_009633.1	1047254	1047454	D	TIGRFAM: DNA binding domain, excisionase family; KEGG: vvy:VV2209 hypothetical protein; DNA binding domain-containing protein	1047254..1047454	Alkaliphilus metalliredigens QYMF	5311054
YP_001318880.1	CDS	Amet_1004	NC_009633.1	1047625	1049934	D	KEGG: cac:CAC1026 superfamily I DNA helicase; superfamily I DNA helicase	1047625..1049934	Alkaliphilus metalliredigens QYMF	5311055
YP_001318881.1	CDS	Amet_1005	NC_009633.1	1050489	1050734	D	hypothetical protein	1050489..1050734	Alkaliphilus metalliredigens QYMF	5311056
YP_001318882.1	CDS	Amet_1006	NC_009633.1	1050883	1052991	R	PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH, type 1, domain protein; SMART: KH domain protein; KEGG: tte:TTE1387 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase); polynucleotide phosphorylase/polyadenylase	complement(1050883..1052991)	Alkaliphilus metalliredigens QYMF	5311057
YP_001318883.1	CDS	Amet_1007	NC_009633.1	1053422	1053937	D	PFAM: NUDIX hydrolase; KEGG: psb:Psyr_2666 NUDIX hydrolase; NUDIX hydrolase	1053422..1053937	Alkaliphilus metalliredigens QYMF	5311058
YP_001318884.1	CDS	Amet_1008	NC_009633.1	1054341	1054541	D	TIGRFAM: DNA binding domain, excisionase family; KEGG: she:Shewmr4_2780 phage transcriptional regulator, AlpA; DNA binding domain-containing protein	1054341..1054541	Alkaliphilus metalliredigens QYMF	5311059
YP_001318885.1	CDS	Amet_1009	NC_009633.1	1054646	1055953	D	PFAM: major facilitator superfamily MFS_1; KEGG: rba:RB3032 hypothetical protein; major facilitator superfamily transporter	1054646..1055953	Alkaliphilus metalliredigens QYMF	5311060
YP_001318886.1	CDS	Amet_1010	NC_009633.1	1056192	1057808	D	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: pha:PSHAa1403 sulfate permease protein; sulfate transporter	1056192..1057808	Alkaliphilus metalliredigens QYMF	5311061
YP_001318887.1	CDS	Amet_1011	NC_009633.1	1058269	1058514	D	hypothetical protein	1058269..1058514	Alkaliphilus metalliredigens QYMF	5311062
YP_001318888.1	CDS	Amet_1012	NC_009633.1	1058843	1060594	D	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; KEGG: cpf:CPF_1523 sensory box histidine kinase; PAS/PAC sensor signal transduction histidine kinase	1058843..1060594	Alkaliphilus metalliredigens QYMF	5311063
YP_001318889.1	CDS	Amet_1013	NC_009633.1	1060946	1062574	D	PFAM: response regulator receiver; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; KEGG: pin:Ping_3329 hybrid sensor and regulator fused; histidine kinase	1060946..1062574	Alkaliphilus metalliredigens QYMF	5311064
YP_001318890.1	CDS	Amet_1014	NC_009633.1	1062591	1063286	R	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cth:Cthe_1394 two component transcriptional regulator, winged helix family; two component transcriptional regulator	complement(1062591..1063286)	Alkaliphilus metalliredigens QYMF	5311065
YP_001318891.1	CDS	Amet_1015	NC_009633.1	1063609	1063785	D	hypothetical protein	1063609..1063785	Alkaliphilus metalliredigens QYMF	5311066
YP_001318892.1	CDS	Amet_1016	NC_009633.1	1064040	1064465	D	PFAM: nucleoside recognition domain protein; KEGG: bcl:ABC3053 hypothetical protein; nucleoside recognition domain-containing protein	1064040..1064465	Alkaliphilus metalliredigens QYMF	5311067
YP_001318893.1	CDS	Amet_1017	NC_009633.1	1064465	1064941	D	PFAM: nucleoside recognition domain protein; KEGG: rxy:Rxyl_0326 nucleoside recognition; nucleoside recognition domain-containing protein	1064465..1064941	Alkaliphilus metalliredigens QYMF	5311068
YP_001318894.1	CDS	Amet_1018	NC_009633.1	1065408	1066508	D	TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase, zinc-binding; bifunctional deaminase-reductase domain protein; KEGG: cno:NT01CX_0715 riboflavin biosynthesis protein RibD; riboflavin biosynthesis protein RibD	1065408..1066508	Alkaliphilus metalliredigens QYMF	5311069
YP_001318895.1	CDS	Amet_1019	NC_009633.1	1066513	1067169	D	catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha	1066513..1067169	Alkaliphilus metalliredigens QYMF	5311070
YP_001318896.1	CDS	Amet_1020	NC_009633.1	1067255	1068466	D	PFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; KEGG: cno:NT01CX_0713 riboflavin biosynthesis protein RibA; GTP cyclohydrolase II	1067255..1068466	Alkaliphilus metalliredigens QYMF	5311071
YP_001318897.1	CDS	ribH	NC_009633.1	1068468	1068929	D	RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase	1068468..1068929	Alkaliphilus metalliredigens QYMF	5311072
YP_001318898.1	CDS	Amet_1022	NC_009633.1	1069430	1070293	D	KEGG: mes:Meso_2435 extracellular solute-binding protein, family 1; extracellular solute-binding protein	1069430..1070293	Alkaliphilus metalliredigens QYMF	5311073
YP_001318899.1	CDS	Amet_1023	NC_009633.1	1070308	1071000	D	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: swo:Swol_1632 sulfate/tungstate uptake family ABC transporter, permease protein; binding-protein-dependent transport system inner membrane protein	1070308..1071000	Alkaliphilus metalliredigens QYMF	5311074
YP_001318900.1	CDS	Amet_1024	NC_009633.1	1071000	1071707	D	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: swo:Swol_1631 tungsten transporter, ATP binding protein; ABC transporter-like protein	1071000..1071707	Alkaliphilus metalliredigens QYMF	5311075
YP_001318901.1	CDS	Amet_1025	NC_009633.1	1071799	1072005	D	hypothetical protein	1071799..1072005	Alkaliphilus metalliredigens QYMF	5311076
YP_001318902.1	CDS	Amet_1026	NC_009633.1	1072128	1072547	D	PFAM: CBS domain containing protein; KEGG: cno:NT01CX_0657 two CBS domain containing protein; hypothetical protein	1072128..1072547	Alkaliphilus metalliredigens QYMF	5311077
YP_001318903.1	CDS	Amet_1027	NC_009633.1	1072671	1072811	D	hypothetical protein	1072671..1072811	Alkaliphilus metalliredigens QYMF	5311078
YP_001318904.1	CDS	Amet_1028	NC_009633.1	1072859	1073206	D	KEGG: tte:TTE1897 hypothetical protein; hypothetical protein	1072859..1073206	Alkaliphilus metalliredigens QYMF	5311079
YP_001318905.1	CDS	Amet_1029	NC_009633.1	1073394	1074332	D	TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: oih:OB2530 attenuator for lytABC and LytR expression; cell envelope-related transcriptional attenuator	1073394..1074332	Alkaliphilus metalliredigens QYMF	5311080
YP_001318906.1	CDS	Amet_1030	NC_009633.1	1074544	1076268	D	PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: cth:Cthe_0083 serine phosphatase; stage II sporulation E family protein	1074544..1076268	Alkaliphilus metalliredigens QYMF	5311081
YP_001318907.1	CDS	Amet_1031	NC_009633.1	1076402	1076779	D	KEGG: cac:CAC0803 hypothetical protein; hypothetical protein	1076402..1076779	Alkaliphilus metalliredigens QYMF	5311082
YP_001318908.1	CDS	Amet_1032	NC_009633.1	1077254	1079461	D	TIGRFAM: ABC-type bacteriocin transporter; PFAM: ABC transporter, transmembrane region; ABC transporter related; peptidase C39, bacteriocin processing; SMART: AAA ATPase; KEGG: cpr:CPR_1082 bacteriocin ABC transporter, ATP-binding/permease protein, putative; bacteriocin ABC transporter	1077254..1079461	Alkaliphilus metalliredigens QYMF	5311083
YP_001318909.1	CDS	Amet_1033	NC_009633.1	1079458	1080933	D	PFAM: secretion protein HlyD family protein; KEGG: cpr:CPR_1083 bacteriocin ABC transporter, bacteriocin-binding protein, putative; secretion protein HlyD family protein	1079458..1080933	Alkaliphilus metalliredigens QYMF	5311084
YP_001318910.1	CDS	Amet_1034	NC_009633.1	1081229	1081507	D	hypothetical protein	1081229..1081507	Alkaliphilus metalliredigens QYMF	5311085
YP_001318911.1	CDS	Amet_1035	NC_009633.1	1082768	1083592	D	PFAM: Abortive infection protein; KEGG: tte:TTE2577 predicted metal-dependent membrane protease; abortive infection protein	1082768..1083592	Alkaliphilus metalliredigens QYMF	5311086
YP_001318912.1	CDS	Amet_1036	NC_009633.1	1084048	1084917	D	PFAM: Abortive infection protein; KEGG: cth:Cthe_2176 abortive infection protein; abortive infection protein	1084048..1084917	Alkaliphilus metalliredigens QYMF	5311087
YP_001318913.1	CDS	Amet_1038	NC_009633.1	1085725	1085967	D	hypothetical protein	1085725..1085967	Alkaliphilus metalliredigens QYMF	5311089
YP_001318914.1	CDS	Amet_1039	NC_009633.1	1086319	1087860	D	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; Tetratricopeptide domain protein; KEGG: cth:Cthe_0533 radical SAM; radical SAM domain-containing protein	1086319..1087860	Alkaliphilus metalliredigens QYMF	5311090
YP_001318915.1	CDS	Amet_1040	NC_009633.1	1087959	1088324	D	PFAM: regulatory protein, LuxR; KEGG: rme:Rmet_2534 ATP-dependent transcriptional regulator, MalT-like, LuxR family; regulatory protein LuxR	1087959..1088324	Alkaliphilus metalliredigens QYMF	5311091
YP_001318916.1	CDS	Amet_1041	NC_009633.1	1088662	1088859	D	hypothetical protein	1088662..1088859	Alkaliphilus metalliredigens QYMF	5311092
YP_001318917.1	CDS	Amet_1042	NC_009633.1	1088951	1089766	D	PFAM: Abortive infection protein; KEGG: cth:Cthe_2176 abortive infection protein; abortive infection protein	1088951..1089766	Alkaliphilus metalliredigens QYMF	5311093
YP_001318918.1	CDS	Amet_1044	NC_009633.1	1090104	1090313	R	hypothetical protein	complement(1090104..1090313)	Alkaliphilus metalliredigens QYMF	5311095
YP_001318919.1	CDS	Amet_1045	NC_009633.1	1090317	1091060	R	PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: dsy:DSY0836 hypothetical protein; IstB ATP binding domain-containing protein	complement(1090317..1091060)	Alkaliphilus metalliredigens QYMF	5311096
YP_001318920.1	CDS	Amet_1046	NC_009633.1	1091048	1092601	R	PFAM: Integrase, catalytic region; KEGG: bha:BH3965 transposase (22); integrase catalytic subunit	complement(1091048..1092601)	Alkaliphilus metalliredigens QYMF	5311097
YP_001318921.1	CDS	Amet_1047	NC_009633.1	1093222	1094761	D	KEGG: swo:Swol_2451 hypothetical protein; hypothetical protein	join(1093222..1094010,1094009..1094761)	Alkaliphilus metalliredigens QYMF	5311098
YP_001318922.1	CDS	Amet_1048	NC_009633.1	1095115	1095351	D	hypothetical protein	1095115..1095351	Alkaliphilus metalliredigens QYMF	5311099
YP_001318923.1	CDS	Amet_1049	NC_009633.1	1095785	1096003	D	hypothetical protein	1095785..1096003	Alkaliphilus metalliredigens QYMF	5311100
YP_001318924.1	CDS	Amet_1050	NC_009633.1	1096093	1096596	D	hypothetical protein	1096093..1096596	Alkaliphilus metalliredigens QYMF	5311101
YP_001318925.1	CDS	Amet_1053	NC_009633.1	1098205	1098423	D	hypothetical protein	1098205..1098423	Alkaliphilus metalliredigens QYMF	5311104
YP_001318926.1	CDS	Amet_1054	NC_009633.1	1099623	1100165	D	PFAM: Abortive infection protein; KEGG: bca:BCE_A0113 CAAX amino terminal protease family protein; abortive infection protein	1099623..1100165	Alkaliphilus metalliredigens QYMF	5311105
YP_001318927.1	CDS	Amet_1055	NC_009633.1	1101171	1101614	D	KEGG: mac:MA4628 reverse transcriptase; hypothetical protein	1101171..1101614	Alkaliphilus metalliredigens QYMF	5311106
YP_001318928.1	CDS	Amet_1056	NC_009633.1	1101572	1103629	R	PFAM: Resolvase, N-terminal domain; KEGG: fra:Francci3_2088 recombinase; resolvase domain-containing protein	complement(1101572..1103629)	Alkaliphilus metalliredigens QYMF	5311107
YP_001318929.1	CDS	Amet_1058	NC_009633.1	1104728	1104967	D	hypothetical protein	1104728..1104967	Alkaliphilus metalliredigens QYMF	5311109
YP_001318930.1	CDS	Amet_1059	NC_009633.1	1105572	1108877	D	PFAM: peptidase M16 domain protein; Peptidase M16C associated domain protein; KEGG: cno:NT01CX_1662 Zn-dependent peptidase, insulinase family; peptidase M16C associated domain-containing protein	1105572..1108877	Alkaliphilus metalliredigens QYMF	5311110
YP_001318931.1	CDS	Amet_1060	NC_009633.1	1109338	1110114	D	PFAM: regulatory protein, LuxR; Sigma-70, region 4 type 2; KEGG: tte:TTE2508 putative regulator of acetoin metabolism; regulatory protein LuxR	1109338..1110114	Alkaliphilus metalliredigens QYMF	5311111
YP_001318932.1	CDS	Amet_1061	NC_009633.1	1110154	1110312	D	hypothetical protein	1110154..1110312	Alkaliphilus metalliredigens QYMF	5311112
YP_001318933.1	CDS	Amet_1062	NC_009633.1	1110496	1110903	D	hypothetical protein	1110496..1110903	Alkaliphilus metalliredigens QYMF	5311113
YP_001318934.1	CDS	Amet_1063	NC_009633.1	1111458	1113227	R	TIGRFAM: oligoendopeptidase, pepF/M3 family; PFAM: peptidase M3A and M3B, thimet/oligopeptidase F; Oligopeptidase F; KEGG: tte:TTE2488 oligoendopeptidase F; pepF/M3 family oligoendopeptidase	complement(1111458..1113227)	Alkaliphilus metalliredigens QYMF	5311114
YP_001318935.1	CDS	Amet_1064	NC_009633.1	1113299	1114840	R	PFAM: GCN5-related N-acetyltransferase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: bha:BH1089 hypothetical protein; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase	complement(1113299..1114840)	Alkaliphilus metalliredigens QYMF	5311115
YP_001318936.1	CDS	Amet_1065	NC_009633.1	1115206	1116195	D	PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: ctc:CTC00263 predicted catabolite control protein A; alanine racemase	1115206..1116195	Alkaliphilus metalliredigens QYMF	5311116
YP_001318937.1	CDS	tig	NC_009633.1	1116651	1117937	D	Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor	1116651..1117937	Alkaliphilus metalliredigens QYMF	5311117
YP_001318938.1	CDS	clpP	NC_009633.1	1117985	1118569	D	hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit	1117985..1118569	Alkaliphilus metalliredigens QYMF	5311118
YP_001318939.1	CDS	clpX	NC_009633.1	1118594	1119856	D	binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX	1118594..1119856	Alkaliphilus metalliredigens QYMF	5311119
YP_001318940.1	CDS	Amet_1069	NC_009633.1	1120001	1120525	R	PFAM: Chromate transporter; KEGG: ctc:CTC00661 chromate transport protein; chromate transporter	complement(1120001..1120525)	Alkaliphilus metalliredigens QYMF	5311120
YP_001318941.1	CDS	Amet_1070	NC_009633.1	1120512	1121063	R	PFAM: Chromate transporter; KEGG: ctc:CTC00660 chromate transport protein; chromate transporter	complement(1120512..1121063)	Alkaliphilus metalliredigens QYMF	5311121
YP_001318942.1	CDS	Amet_1071	NC_009633.1	1121249	1122943	D	TIGRFAM: Sporulation protease LonB; PFAM: magnesium chelatase, ChlI subunit; AAA ATPase, central domain protein; peptidase S16, lon domain protein; SMART: AAA ATPase; KEGG: cth:Cthe_2742 endopeptidase La; sporulation protease LonB	1121249..1122943	Alkaliphilus metalliredigens QYMF	5311122
YP_001318943.1	CDS	Amet_1072	NC_009633.1	1123176	1125527	D	KEGG: cth:Cthe_0082 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16, lon domain protein; AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; ATP-dependent protease La	1123176..1125527	Alkaliphilus metalliredigens QYMF	5311123
YP_001318944.1	CDS	engB	NC_009633.1	1125517	1126143	D	binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC	1125517..1126143	Alkaliphilus metalliredigens QYMF	5311124
YP_001318945.1	CDS	Amet_1074	NC_009633.1	1126258	1126695	D	catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase	1126258..1126695	Alkaliphilus metalliredigens QYMF	5311125
YP_001318946.1	CDS	Amet_1075	NC_009633.1	1126771	1127631	D	TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding, N-terminal domain protein; KEGG: lsl:LSL_1795 shikimate 5-dehydrogenase; shikimate 5-dehydrogenase	1126771..1127631	Alkaliphilus metalliredigens QYMF	5311126
YP_001318947.1	CDS	Amet_1076	NC_009633.1	1127713	1128597	R	PFAM: protein of unknown function DUF6, transmembrane; KEGG: tte:TTE0639 permeases of the drug/metabolite transporter (DMT) superfamily; hypothetical protein	complement(1127713..1128597)	Alkaliphilus metalliredigens QYMF	5311127
YP_001318948.1	CDS	Amet_1077	NC_009633.1	1129107	1130651	D	TIGRFAM: anthranilate synthase component I; PFAM: Anthranilate synthase component I and chorismate binding protein; Anthranilate synthase component I domain protein; KEGG: cth:Cthe_0875 anthranilate synthase component I; anthranilate synthase component I	1129107..1130651	Alkaliphilus metalliredigens QYMF	5311128
YP_001318949.1	CDS	Amet_1078	NC_009633.1	1130663	1131226	D	TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: tma:TM0141 anthranilate synthase component II / anthranilate phosphoribosyltransferase; glutamine amidotransferase of anthranilate synthase	1130663..1131226	Alkaliphilus metalliredigens QYMF	5311129
YP_001318950.1	CDS	trpD	NC_009633.1	1131316	1132338	D	Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase	1131316..1132338	Alkaliphilus metalliredigens QYMF	5311130
YP_001318951.1	CDS	trpC	NC_009633.1	1132335	1133120	D	involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; Indole-3-glycerol phosphate synthase	1132335..1133120	Alkaliphilus metalliredigens QYMF	5311131
YP_001318952.1	CDS	Amet_1081	NC_009633.1	1133104	1133727	D	PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: tte:TTE1579 phosphoribosylanthranilate isomerase; phosphoribosylanthranilate isomerase	1133104..1133727	Alkaliphilus metalliredigens QYMF	5311132
YP_001318953.1	CDS	Amet_1082	NC_009633.1	1133724	1134926	D	catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta	1133724..1134926	Alkaliphilus metalliredigens QYMF	5311133
YP_001318954.1	CDS	trpA	NC_009633.1	1134916	1135716	D	catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha	1134916..1135716	Alkaliphilus metalliredigens QYMF	5311134
YP_001318955.1	CDS	Amet_1084	NC_009633.1	1135803	1135961	R	PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: cth:Cthe_2164 rubredoxin-type Fe(Cys)4 protein; rubredoxin-type Fe(Cys)4 protein	complement(1135803..1135961)	Alkaliphilus metalliredigens QYMF	5311135
YP_001318956.1	CDS	Amet_1085	NC_009633.1	1136166	1137281	D	KEGG: bha:BH3246 aminopeptidase; aminopeptidase	1136166..1137281	Alkaliphilus metalliredigens QYMF	5311136
YP_001318957.1	CDS	Amet_1086	NC_009633.1	1137361	1138107	R	PFAM: protein of unknown function DUF541; KEGG: btl:BALH_3699 hypothetical protein; hypothetical protein	complement(1137361..1138107)	Alkaliphilus metalliredigens QYMF	5311137
YP_001318958.1	CDS	Amet_1087	NC_009633.1	1138439	1138660	D	PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: cac:CAC0669 hypothetical protein; BFD/(2Fe-2S)-binding domain-containing protein	1138439..1138660	Alkaliphilus metalliredigens QYMF	5311138
YP_001318959.1	CDS	Amet_1088	NC_009633.1	1138849	1139547	D	PFAM: protein of unknown function DUF161; KEGG: dsy:DSY3984 hypothetical protein; hypothetical protein	1138849..1139547	Alkaliphilus metalliredigens QYMF	5311139
YP_001318960.1	CDS	Amet_1089	NC_009633.1	1139835	1141550	D	PFAM: glycoside hydrolase, family 18; SMART: chitinase II; KEGG: cth:Cthe_2895 glycoside hydrolase, family 18; glycoside hydrolase	1139835..1141550	Alkaliphilus metalliredigens QYMF	5311140
YP_001318961.1	CDS	Amet_1090	NC_009633.1	1141656	1143176	D	PFAM: TPR repeat-containing protein; ADP-ribosylation/Crystallin J1; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mtp:Mthe_0488 ADP-ribosylation/crystallin J1; ADP-ribosylation/crystallin J1	1141656..1143176	Alkaliphilus metalliredigens QYMF	5311141
YP_001318962.1	CDS	Amet_1091	NC_009633.1	1143179	1144375	R	PFAM: major facilitator superfamily MFS_1; KEGG: dra:DR1307 major facilitator family protein; major facilitator superfamily transporter	complement(1143179..1144375)	Alkaliphilus metalliredigens QYMF	5311142
YP_001318963.1	CDS	Amet_1092	NC_009633.1	1144456	1144743	D	hypothetical protein	1144456..1144743	Alkaliphilus metalliredigens QYMF	5311143
YP_001318964.1	CDS	Amet_1093	NC_009633.1	1145134	1145280	D	hypothetical protein	1145134..1145280	Alkaliphilus metalliredigens QYMF	5311144
YP_001318965.1	CDS	Amet_1094	NC_009633.1	1145301	1147784	D	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: aeh:Mlg_1383 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase	1145301..1147784	Alkaliphilus metalliredigens QYMF	5311145
YP_001318966.1	CDS	Amet_1095	NC_009633.1	1148018	1148464	D	hypothetical protein	1148018..1148464	Alkaliphilus metalliredigens QYMF	5311146
YP_001318967.1	CDS	Amet_1096	NC_009633.1	1149014	1149472	R	hypothetical protein	complement(1149014..1149472)	Alkaliphilus metalliredigens QYMF	5311147
YP_001318968.1	CDS	Amet_1097	NC_009633.1	1149501	1150061	R	KEGG: mma:MM1839 hypothetical protein; hypothetical protein	complement(1149501..1150061)	Alkaliphilus metalliredigens QYMF	5311148
YP_001318969.1	CDS	Amet_1099	NC_009633.1	1151610	1152308	D	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: tte:TTE2474 response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain; two component transcriptional regulator	1151610..1152308	Alkaliphilus metalliredigens QYMF	5311150
YP_001318970.1	CDS	Amet_1100	NC_009633.1	1152305	1153708	D	PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; KEGG: tte:TTE2473 sensory transduction histidine kinase; integral membrane sensor signal transduction histidine kinase	1152305..1153708	Alkaliphilus metalliredigens QYMF	5311151
YP_001318971.1	CDS	Amet_1101	NC_009633.1	1153937	1155067	D	PFAM: YibE/F family protein; KEGG: cac:CAC2436 hypothetical protein; hypothetical protein	1153937..1155067	Alkaliphilus metalliredigens QYMF	5311152
YP_001318972.1	CDS	Amet_1102	NC_009633.1	1155169	1155456	R	hypothetical protein	complement(1155169..1155456)	Alkaliphilus metalliredigens QYMF	5311153
YP_001318973.1	CDS	Amet_1103	NC_009633.1	1155874	1156464	D	KEGG: sfr:Sfri_3880 hypothetical protein; hypothetical protein	1155874..1156464	Alkaliphilus metalliredigens QYMF	5311154
YP_001318974.1	CDS	Amet_1104	NC_009633.1	1156484	1157395	D	PFAM: Ppx/GppA phosphatase; KEGG: ade:Adeh_0658 Ppx/GppA phosphatase; Ppx/GppA phosphatase	1156484..1157395	Alkaliphilus metalliredigens QYMF	5311155
YP_001318975.1	CDS	Amet_1105	NC_009633.1	1157531	1158520	D	PFAM: Uncharacterized protein UPF0065; KEGG: dsy:DSY0995 hypothetical protein; hypothetical protein	1157531..1158520	Alkaliphilus metalliredigens QYMF	5311156
YP_001318976.1	CDS	Amet_1106	NC_009633.1	1158618	1159184	D	KEGG: bcl:ABC1014 hypothetical protein; hypothetical protein	1158618..1159184	Alkaliphilus metalliredigens QYMF	5311157
YP_001318977.1	CDS	Amet_1107	NC_009633.1	1159209	1160705	D	PFAM: protein of unknown function DUF112, transmembrane; KEGG: dsy:DSY0992 hypothetical protein; hypothetical protein	1159209..1160705	Alkaliphilus metalliredigens QYMF	5311158
YP_001318978.1	CDS	Amet_1108	NC_009633.1	1160977	1161282	D	hypothetical protein	1160977..1161282	Alkaliphilus metalliredigens QYMF	5311159
YP_001318979.1	CDS	Amet_1109	NC_009633.1	1161378	1163252	R	PFAM: transposase, IS4 family protein; KEGG: tte:TTE2604 transposase; transposase, IS4 family protein	complement(1161378..1163252)	Alkaliphilus metalliredigens QYMF	5311160
YP_001318980.1	CDS	Amet_1110	NC_009633.1	1163538	1163987	R	PFAM: regulatory protein, MarR; KEGG: bcz:BCZK3880 transcriptional regulator, MarR family; MarR family transcriptional regulator	complement(1163538..1163987)	Alkaliphilus metalliredigens QYMF	5311161
YP_001318981.1	CDS	Amet_1111	NC_009633.1	1164243	1165610	D	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: ctc:CTC00603 Na+ driven multidrug efflux pump (MviN domain); MATE efflux family protein	1164243..1165610	Alkaliphilus metalliredigens QYMF	5311162
YP_001318982.1	CDS	Amet_1112	NC_009633.1	1165793	1166056	D	hypothetical protein	1165793..1166056	Alkaliphilus metalliredigens QYMF	5311163
YP_001318983.1	CDS	Amet_1113	NC_009633.1	1166291	1166452	D	PFAM: protein of unknown function DUF1540; KEGG: cac:CAC3540 hypothetical protein; hypothetical protein	1166291..1166452	Alkaliphilus metalliredigens QYMF	5311164
YP_001318984.1	CDS	Amet_1114	NC_009633.1	1166696	1167286	D	KEGG: ctc:CTC00782 hypothetical protein; hypothetical protein	1166696..1167286	Alkaliphilus metalliredigens QYMF	5311165
YP_001318985.1	CDS	Amet_1115	NC_009633.1	1167348	1167476	D	hypothetical protein	1167348..1167476	Alkaliphilus metalliredigens QYMF	5311166
YP_001318986.1	CDS	Amet_1116	NC_009633.1	1167497	1167928	D	TIGRFAM: flavodoxin; PFAM: flavodoxin/nitric oxide synthase; KEGG: dsy:DSY0733 hypothetical protein; flavodoxin	1167497..1167928	Alkaliphilus metalliredigens QYMF	5311167
YP_001318987.1	CDS	Amet_1117	NC_009633.1	1168674	1169603	D	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: fnu:FN1521 dipeptide transport system permease protein dppB; binding-protein-dependent transport system inner membrane protein	1168674..1169603	Alkaliphilus metalliredigens QYMF	5311168
YP_001318988.1	CDS	Amet_1118	NC_009633.1	1169614	1170507	D	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mma:MM3320 oligopeptide transporter, permease protein; binding-protein-dependent transport system inner membrane protein	1169614..1170507	Alkaliphilus metalliredigens QYMF	5311169
YP_001318989.1	CDS	Amet_1119	NC_009633.1	1170519	1172075	D	PFAM: extracellular solute-binding protein, family 5; KEGG: ssa:SSA_0493 ABC-type dipeptide/nickel transport system, periplasmic component, putative; extracellular solute-binding protein	1170519..1172075	Alkaliphilus metalliredigens QYMF	5311170
YP_001318990.1	CDS	Amet_1120	NC_009633.1	1172119	1173102	D	TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; KEGG: fnu:FN1110 dipeptide transport ATP-binding protein dppD; oligopeptide/dipeptide ABC transporter ATPase	1172119..1173102	Alkaliphilus metalliredigens QYMF	5311171
YP_001318991.1	CDS	Amet_1121	NC_009633.1	1173074	1173868	D	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mac:MA4253 oligopeptide ABC transporter, ATP-binding protein; ABC transporter-like protein	1173074..1173868	Alkaliphilus metalliredigens QYMF	5311172
YP_001318992.1	CDS	Amet_1122	NC_009633.1	1173861	1175279	D	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: cth:Cthe_2306 MATE efflux family protein; MATE efflux family protein	1173861..1175279	Alkaliphilus metalliredigens QYMF	5311173
YP_001318993.1	CDS	Amet_1123	NC_009633.1	1175358	1176305	D	PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: ssa:SSA_0496 succinylglutamate desuccinylase / aspartoacylase family, putative; succinylglutamate desuccinylase/aspartoacylase	1175358..1176305	Alkaliphilus metalliredigens QYMF	5311174
YP_001318994.1	CDS	Amet_1124	NC_009633.1	1176579	1176932	D	PFAM: Protein of unknown function CGGC region; KEGG: ctc:CTC00418 hypothetical protein; hypothetical protein	1176579..1176932	Alkaliphilus metalliredigens QYMF	5311175
YP_001318995.1	CDS	Amet_1125	NC_009633.1	1177004	1177342	D	PFAM: Cupin 2, conserved barrel domain protein; KEGG: ctc:CTC00439 hypothetical protein; cupin	1177004..1177342	Alkaliphilus metalliredigens QYMF	5311176
YP_001318996.1	CDS	Amet_1126	NC_009633.1	1177441	1178124	R	PFAM: cyclic nucleotide-binding; SMART: regulatory protein, Crp; KEGG: cno:NT01CX_0590 cyclic nucleotide-binding domain containing transcriptional regulator, putative; CRP/FNR family transcriptional regulator	complement(1177441..1178124)	Alkaliphilus metalliredigens QYMF	5311177
YP_001318997.1	CDS	Amet_1127	NC_009633.1	1178323	1182375	D	TIGRFAM: putative CoA-substrate-specific enzyme activase; PFAM: ATPase, BadF/BadG/BcrA/BcrD type; KEGG: mhu:Mhun_1325 CoA enzyme activase; putative CoA-substrate-specific enzyme activase	1178323..1182375	Alkaliphilus metalliredigens QYMF	5311178
YP_001318998.1	CDS	Amet_1128	NC_009633.1	1182359	1183093	D	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dsy:DSY2734 hypothetical protein; ABC transporter-like protein	1182359..1183093	Alkaliphilus metalliredigens QYMF	5311179
YP_001318999.1	CDS	Amet_1129	NC_009633.1	1183179	1184204	D	KEGG: cpe:CPE1487 putative sulfonate/nitrate transport system substrate-binding protein; putative sulfonate/nitrate transport system substrate-binding protein	1183179..1184204	Alkaliphilus metalliredigens QYMF	5311180
YP_001319000.1	CDS	Amet_1130	NC_009633.1	1184179	1184931	D	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cpr:CPR_1465 ABC transporter, permease protein, cysTW family, putative; binding-protein-dependent transport system inner membrane protein	1184179..1184931	Alkaliphilus metalliredigens QYMF	5311181
YP_001319001.1	CDS	Amet_1131	NC_009633.1	1185239	1186876	D	TIGRFAM: nickel ABC transporter, periplasmic nickel-binding protein; PFAM: extracellular solute-binding protein, family 5; KEGG: wsu:WS0984 putative nikA protein; nickel ABC transporter periplasmic nickel-binding protein	1185239..1186876	Alkaliphilus metalliredigens QYMF	5311182
YP_001319002.1	CDS	Amet_1132	NC_009633.1	1186955	1187890	D	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: wsu:WS0985 nickel transport system permease; binding-protein-dependent transport system inner membrane protein	1186955..1187890	Alkaliphilus metalliredigens QYMF	5311183
YP_001319003.1	CDS	Amet_1133	NC_009633.1	1187890	1188711	D	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: wsu:WS0986 oligopeptide ABC transporter permease; binding-protein-dependent transport system inner membrane protein	1187890..1188711	Alkaliphilus metalliredigens QYMF	5311184
YP_001319004.1	CDS	Amet_1134	NC_009633.1	1188716	1189525	D	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: wsu:WS0987 putative oligopeptide transporter; ABC transporter-like protein	1188716..1189525	Alkaliphilus metalliredigens QYMF	5311185
YP_001319005.1	CDS	Amet_1135	NC_009633.1	1189538	1190341	D	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: wsu:WS0988 oligopeptide ABC transporter ATP-binding protein; ABC transporter-like protein	1189538..1190341	Alkaliphilus metalliredigens QYMF	5311186
YP_001319006.1	CDS	Amet_1136	NC_009633.1	1190319	1191653	D	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: wsu:WS0989 DNA-damage-inducible protein; MATE efflux family protein	1190319..1191653	Alkaliphilus metalliredigens QYMF	5311187
YP_001319007.1	CDS	Amet_1137	NC_009633.1	1191692	1193299	D	PFAM: histidine kinase, HAMP region domain protein; histidine kinase internal region; KEGG: ctc:CTC01848 two-component sensor kinase YesM; histidine kinase internal subunit	1191692..1193299	Alkaliphilus metalliredigens QYMF	5311188
YP_001319008.1	CDS	Amet_1138	NC_009633.1	1193292	1194053	D	PFAM: helix-turn-helix- domain containing protein, AraC type; response regulator receiver; KEGG: ctc:CTC01849 transcriptional regulatory protein; response regulator receiver protein	1193292..1194053	Alkaliphilus metalliredigens QYMF	5311189
YP_001319009.1	CDS	Amet_1139	NC_009633.1	1194142	1196061	R	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: dsy:DSY0154 hypothetical protein; heavy metal translocating P-type ATPase	complement(1194142..1196061)	Alkaliphilus metalliredigens QYMF	5311190
YP_001319010.1	CDS	Amet_1140	NC_009633.1	1196070	1196345	R	PFAM: protein of unknown function DUF156; KEGG: dsy:DSY0162 hypothetical protein; hypothetical protein	complement(1196070..1196345)	Alkaliphilus metalliredigens QYMF	5311191
YP_001319011.1	CDS	Amet_1141	NC_009633.1	1196653	1198980	D	PFAM: TOPRIM domain protein; DNA topoisomerase, type IA, central domain protein; SMART: DNA topoisomerase I, ATP-binding; DNA topoisomerase I, DNA-binding; Toprim sub domain protein; KEGG: cno:NT01CX_2289 DNA topoisomerase III; DNA topoisomerase type IA central domain-containing protein	1196653..1198980	Alkaliphilus metalliredigens QYMF	5311192
YP_001319012.1	CDS	Amet_1142	NC_009633.1	1199459	1199989	D	PFAM: cation antiporter; KEGG: pfu:PF1153 putative multisubunit Na+/H+ antiporter; cation antiporter	1199459..1199989	Alkaliphilus metalliredigens QYMF	5311193
YP_001319013.1	CDS	Amet_1143	NC_009633.1	1200034	1200291	D	PFAM: multiple resistance and pH regulation protein F; KEGG: pfu:PF1152 putative multisubunit Na+/H+ antiporter; multiple resistance and pH regulation protein F	1200034..1200291	Alkaliphilus metalliredigens QYMF	5311194
YP_001319014.1	CDS	Amet_1144	NC_009633.1	1200295	1200594	D	TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; KEGG: pfu:PF1151 putative multisubunit Na+/H+ antiporter; monovalent cation/proton antiporter subunit MnhG/PhaG	1200295..1200594	Alkaliphilus metalliredigens QYMF	5311195
YP_001319015.1	CDS	Amet_1145	NC_009633.1	1200591	1201130	D	hypothetical protein	1200591..1201130	Alkaliphilus metalliredigens QYMF	5311196
YP_001319016.1	CDS	Amet_1146	NC_009633.1	1201127	1201390	D	hypothetical protein	1201127..1201390	Alkaliphilus metalliredigens QYMF	5311197
YP_001319017.1	CDS	Amet_1147	NC_009633.1	1201474	1201860	D	PFAM: Na+/H+ antiporter MnhB subunit-related protein; KEGG: sha:SH2274 multisubunit Na+/H+ antiporter, MnhB subunit; Na+/H+ antiporter MnhB subunit-like protein	1201474..1201860	Alkaliphilus metalliredigens QYMF	5311198
YP_001319018.1	CDS	Amet_1148	NC_009633.1	1201945	1202220	D	PFAM: NADH-ubiquinone oxidoreductase, chain 4L; KEGG: hma:rrnAC3532 putative multicomponent Na+:H+ antiporter subunit C; NADH-ubiquinone oxidoreductase, chain 4L	1201945..1202220	Alkaliphilus metalliredigens QYMF	5311199
YP_001319019.1	CDS	Amet_1149	NC_009633.1	1202217	1203815	D	PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: wol:WD1107 Na+/H+ antiporter subunit, putative; NADH dehydrogenase (quinone)	1202217..1203815	Alkaliphilus metalliredigens QYMF	5311200
YP_001319020.1	CDS	Amet_1150	NC_009633.1	1204248	1204958	D	PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated domain protein; KEGG: oih:OB0967 transcriptional regulator; GntR family transcriptional regulator	1204248..1204958	Alkaliphilus metalliredigens QYMF	5311201
YP_001319021.1	CDS	Amet_1151	NC_009633.1	1205019	1205618	D	KEGG: cac:CAC3379 uncharacterized protein, YQFW B.subtilis homolog; hypothetical protein	1205019..1205618	Alkaliphilus metalliredigens QYMF	5311202
YP_001319022.1	CDS	Amet_1152	NC_009633.1	1205874	1206299	D	KEGG: oih:OB0968 hypothetical protein; hypothetical protein	1205874..1206299	Alkaliphilus metalliredigens QYMF	5311203
YP_001319023.1	CDS	Amet_1153	NC_009633.1	1206332	1206928	D	KEGG: oih:OB0969 phosphonate metabolism protein; phosphonate metabolism protein	1206332..1206928	Alkaliphilus metalliredigens QYMF	5311204
YP_001319024.1	CDS	Amet_1154	NC_009633.1	1206930	1208135	D	PFAM: phosphonate metabolism; KEGG: oih:OB0970 phosphonate metabolism protein; phosphonate metabolism protein	1206930..1208135	Alkaliphilus metalliredigens QYMF	5311205
YP_001319025.1	CDS	Amet_1155	NC_009633.1	1208119	1208988	D	PFAM: phosphonate metabolism PhnJ; KEGG: oih:OB0971 phosphonate metabolism protein; phosphonate metabolism PhnJ	1208119..1208988	Alkaliphilus metalliredigens QYMF	5311206
YP_001319026.1	CDS	Amet_1156	NC_009633.1	1208981	1209826	D	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: oih:OB0972 phosphonate ABC transporter ATP-binding protein; ABC transporter-like protein	1208981..1209826	Alkaliphilus metalliredigens QYMF	5311207
YP_001319027.1	CDS	Amet_1157	NC_009633.1	1209871	1211064	D	TIGRFAM: phosphonate metabolism protein PhnM; PFAM: amidohydrolase; KEGG: oih:OB0973 phosphonate metabolism protein; phosphonate metabolism protein PhnM	1209871..1211064	Alkaliphilus metalliredigens QYMF	5311208
YP_001319028.1	CDS	Amet_1158	NC_009633.1	1211104	1211811	D	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: oih:OB0974 phosophonate ABC transporter ATP-binding protein; ABC transporter-like protein	1211104..1211811	Alkaliphilus metalliredigens QYMF	5311209
YP_001319029.1	CDS	Amet_1160	NC_009633.1	1212265	1213107	R	TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH0470 phosphonate transport system permease protein; phosphonate ABC transporter inner membrane protein	complement(1212265..1213107)	Alkaliphilus metalliredigens QYMF	5311211
YP_001319030.1	CDS	Amet_1161	NC_009633.1	1213104	1213973	R	TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH0470 phosphonate transport system permease protein; phosphonate ABC transporter inner membrane protein	complement(1213104..1213973)	Alkaliphilus metalliredigens QYMF	5311212
YP_001319031.1	CDS	Amet_1162	NC_009633.1	1213993	1214736	R	TIGRFAM: phosphonate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bha:BH0469 phosphonate transport system ATP-binding protein; phosphonate ABC transporter ATPase	complement(1213993..1214736)	Alkaliphilus metalliredigens QYMF	5311213
YP_001319032.1	CDS	Amet_1163	NC_009633.1	1214899	1216359	D	KEGG: ctc:CTC00917 transposase; transposase	1214899..1216359	Alkaliphilus metalliredigens QYMF	5311214
YP_001319033.1	CDS	Amet_1164	NC_009633.1	1216489	1217499	R	TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: bha:BH0468 phosphonate transport system substrate-binding protein; phosphonate ABC transporter periplasmic phosphonate-binding protein	complement(1216489..1217499)	Alkaliphilus metalliredigens QYMF	5311215
YP_001319034.1	CDS	Amet_1165	NC_009633.1	1218284	1219330	D	TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: GAF domain protein; metal-dependent phosphohydrolase, HD region; KEGG: tte:TTE0038 response regulators consisting of a CheY-like receiver domain and an HD-GYP domain; metal dependent phosphohydrolase	1218284..1219330	Alkaliphilus metalliredigens QYMF	5311216
YP_001319035.1	CDS	Amet_1167	NC_009633.1	1220114	1221652	D	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: mxa:MXAN_3705 GAF domain/GGDEF domain protein; diguanylate cyclase	1220114..1221652	Alkaliphilus metalliredigens QYMF	5311218
YP_001319036.1	CDS	Amet_1168	NC_009633.1	1221783	1223285	D	PFAM: phospholipase D/Transphosphatidylase; KEGG: bcz:BCZK1088 cardiolipin synthetase; phospholipase D/transphosphatidylase	1221783..1223285	Alkaliphilus metalliredigens QYMF	5311219
YP_001319037.1	CDS	Amet_1169	NC_009633.1	1223355	1224368	D	KEGG: cth:Cthe_0352 hypothetical protein; hypothetical protein	1223355..1224368	Alkaliphilus metalliredigens QYMF	5311220
YP_001319038.1	CDS	Amet_1170	NC_009633.1	1224340	1225452	D	KEGG: cth:Cthe_0353 hypothetical protein; hypothetical protein	1224340..1225452	Alkaliphilus metalliredigens QYMF	5311221
YP_001319039.1	CDS	Amet_1171	NC_009633.1	1225427	1226416	D	TIGRFAM: putative CoA-substrate-specific enzyme activase; PFAM: ATPase, BadF/BadG/BcrA/BcrD type; KEGG: mta:Moth_1149 CoA enzyme activase; putative CoA-substrate-specific enzyme activase	1225427..1226416	Alkaliphilus metalliredigens QYMF	5311222
YP_001319040.1	CDS	Amet_1173	NC_009633.1	1227685	1228431	D	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bha:BH1394 putative manganese transport system ATP-binding protein; ABC transporter-like protein	1227685..1228431	Alkaliphilus metalliredigens QYMF	5311224
YP_001319041.1	CDS	Amet_1174	NC_009633.1	1228447	1229277	D	PFAM: ABC-3 protein; KEGG: cth:Cthe_0549 ABC-3; ABC-3 protein	1228447..1229277	Alkaliphilus metalliredigens QYMF	5311225
YP_001319042.1	CDS	Amet_1175	NC_009633.1	1229452	1229910	D	hypothetical protein	1229452..1229910	Alkaliphilus metalliredigens QYMF	5311226
YP_001319043.1	CDS	Amet_1176	NC_009633.1	1229953	1230141	R	KEGG: cno:NT01CX_0906 hypothetical protein; hypothetical protein	complement(1229953..1230141)	Alkaliphilus metalliredigens QYMF	5311227
YP_001319044.1	CDS	Amet_1177	NC_009633.1	1230405	1232537	D	TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit; PFAM: Prismane; KEGG: ctc:CTC01156 carbon monoxide dehydrogenase beta subunit; carbon-monoxide dehydrogenase, catalytic subunit	1230405..1232537	Alkaliphilus metalliredigens QYMF	5311228
YP_001319045.1	CDS	Amet_1178	NC_009633.1	1232699	1233106	R	KEGG: mkm:Mkms_2198 protein of unknown function DUF1622; hypothetical protein	complement(1232699..1233106)	Alkaliphilus metalliredigens QYMF	5311229
YP_001319046.1	CDS	Amet_1179	NC_009633.1	1233426	1234166	D	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cth:Cthe_1959 methyltransferase type 11; type 12 methyltransferase	1233426..1234166	Alkaliphilus metalliredigens QYMF	5311230
YP_001319047.1	CDS	Amet_1180	NC_009633.1	1234186	1234872	D	PFAM: cyclic nucleotide-binding; regulatory protein, Crp; KEGG: mta:Moth_0824 transcriptional regulator, Crp/Fnr family; CRP/FNR family transcriptional regulator	1234186..1234872	Alkaliphilus metalliredigens QYMF	5311231
YP_001319048.1	CDS	Amet_1181	NC_009633.1	1234922	1235182	D	PFAM: protein of unknown function DUF156; KEGG: tte:TTE1664 hypothetical protein; hypothetical protein	1234922..1235182	Alkaliphilus metalliredigens QYMF	5311232
YP_001319049.1	CDS	Amet_1182	NC_009633.1	1235221	1235790	R	KEGG: tte:TTE2425 hypothetical protein; hypothetical protein	complement(1235221..1235790)	Alkaliphilus metalliredigens QYMF	5311233
YP_001319050.1	CDS	Amet_1183	NC_009633.1	1235956	1236168	D	hypothetical protein	1235956..1236168	Alkaliphilus metalliredigens QYMF	5311234
YP_001319051.1	CDS	Amet_1184	NC_009633.1	1236184	1236720	D	TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Polynucleotide kinase 3 phosphatase, central region; KEGG: bcl:ABC1953 histidinol-phosphatase; HAD superfamily hydrolase	1236184..1236720	Alkaliphilus metalliredigens QYMF	5311235
YP_001319052.1	CDS	Amet_1185	NC_009633.1	1236865	1237092	D	Contains selenocysteine; PFAM: glutaredoxin; KEGG: cth:Cthe_0235 glutaredoxin-like protein, YruB-family; glutaredoxin	1236865..1237092	Alkaliphilus metalliredigens QYMF	5311236
YP_001319053.1	CDS	Amet_1186	NC_009633.1	1237189	1237929	R	PFAM: SH3, type 3 domain protein; SCP-like extracellular protein; KEGG: bha:BH2878 hypothetical protein; SCP-like extracellular protein	complement(1237189..1237929)	Alkaliphilus metalliredigens QYMF	5311237
YP_001319054.1	CDS	Amet_1187	NC_009633.1	1238025	1239836	R	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; Heme NO binding domain protein; KEGG: tte:TTE0680 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer	complement(1238025..1239836)	Alkaliphilus metalliredigens QYMF	5311238
YP_001319055.1	CDS	Amet_1188	NC_009633.1	1240346	1240510	D	hypothetical protein	1240346..1240510	Alkaliphilus metalliredigens QYMF	5311239
YP_001319056.1	CDS	Amet_1189	NC_009633.1	1241236	1242084	D	TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; KEGG: dps:DP2907 probable 3-methyl-2-oxobutanoate hydroxymethyltransferase; 3-methyl-2-oxobutanoate hydroxymethyltransferase	1241236..1242084	Alkaliphilus metalliredigens QYMF	5311240
YP_001319057.1	CDS	Amet_1190	NC_009633.1	1242190	1243128	D	KEGG: mth:MTH964 hypothetical protein; hypothetical protein	1242190..1243128	Alkaliphilus metalliredigens QYMF	5311241
YP_001319058.1	CDS	Amet_1191	NC_009633.1	1243239	1244471	D	PFAM: Glu/Leu/Phe/Val dehydrogenase, C terminal; Glu/Leu/Phe/Val dehydrogenase, dimerisation region; KEGG: tte:TTE1205 Glutamate dehydrogenase/leucine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase	1243239..1244471	Alkaliphilus metalliredigens QYMF	5311242
YP_001319059.1	CDS	Amet_1192	NC_009633.1	1244515	1245702	D	TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: pho:PH1043 amidohydrolase; amidohydrolase	1244515..1245702	Alkaliphilus metalliredigens QYMF	5311243
YP_001319060.1	CDS	Amet_1193	NC_009633.1	1245827	1246672	D	PFAM: regulatory protein, IclR; Transcriptional regulator IclR-like; KEGG: chy:CHY_1273 transcriptional regulator, IclR family; transcriptional regulator IclR-like protein	1245827..1246672	Alkaliphilus metalliredigens QYMF	5311244
YP_001319061.1	CDS	Amet_1194	NC_009633.1	1246817	1247989	D	PFAM: creatinase; peptidase M24; KEGG: bcl:ABC0020 Xaa-Pro dipeptidase; creatinase	1246817..1247989	Alkaliphilus metalliredigens QYMF	5311245
YP_001319062.1	CDS	Amet_1195	NC_009633.1	1248155	1248889	D	PFAM: Asp/Glu racemase; KEGG: pho:PH0985 arylmalonate decarboxylase; Asp/Glu racemase	1248155..1248889	Alkaliphilus metalliredigens QYMF	5311246
YP_001319063.1	CDS	Amet_1196	NC_009633.1	1248891	1249835	D	PFAM: protein of unknown function DUF6, transmembrane; KEGG: mac:MA3243 integral membrane protein; hypothetical protein	1248891..1249835	Alkaliphilus metalliredigens QYMF	5311247
YP_001319064.1	CDS	Amet_1197	NC_009633.1	1249856	1250404	D	PFAM: GCN5-related N-acetyltransferase; KEGG: oih:OB0365 hypothetical protein; N-acetyltransferase GCN5	1249856..1250404	Alkaliphilus metalliredigens QYMF	5311248
YP_001319065.1	CDS	Amet_1198	NC_009633.1	1250491	1251357	R	catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin; 2-oxoglutarate ferredoxin oxidoreductase subunit beta	complement(1250491..1251357)	Alkaliphilus metalliredigens QYMF	5311249
YP_001319066.1	CDS	Amet_1199	NC_009633.1	1251357	1253078	R	PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: bat:BAS3623 pyruvate ferredoxin oxidoreductase, alpha subunit, putative; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein	complement(1251357..1253078)	Alkaliphilus metalliredigens QYMF	5311250
YP_001319067.1	CDS	Amet_1200	NC_009633.1	1253449	1254450	D	TIGRFAM: tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase, class Ib; KEGG: cno:NT01CX_1355 tryptophanyl-tRNA synthetase; tryptophanyl-tRNA synthetase	1253449..1254450	Alkaliphilus metalliredigens QYMF	5311251
YP_001319068.1	CDS	Amet_1201	NC_009633.1	1254568	1254750	D	PFAM: small acid-soluble spore protein, alpha/beta type; alpha/beta type small acid-soluble spore protein	1254568..1254750	Alkaliphilus metalliredigens QYMF	5311252
YP_001319069.1	CDS	Amet_1202	NC_009633.1	1254875	1255582	D	PFAM: protein of unknown function DUF881; KEGG: tte:TTE0278 hypothetical protein; hypothetical protein	1254875..1255582	Alkaliphilus metalliredigens QYMF	5311253
YP_001319070.1	CDS	Amet_1203	NC_009633.1	1255676	1255843	R	hypothetical protein	complement(1255676..1255843)	Alkaliphilus metalliredigens QYMF	5311254
YP_001319071.1	CDS	Amet_1204	NC_009633.1	1255952	1256227	R	hypothetical protein	complement(1255952..1256227)	Alkaliphilus metalliredigens QYMF	5311255
YP_001319072.1	CDS	Amet_1205	NC_009633.1	1256321	1256989	D	PFAM: amino acid-binding ACT domain protein; MgtC/SapB transporter; KEGG: cth:Cthe_1919 MgtC/SapB transporter; MgtC/SapB transporter	1256321..1256989	Alkaliphilus metalliredigens QYMF	5311256
YP_001319073.1	CDS	trmB	NC_009633.1	1257064	1257708	D	tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase	1257064..1257708	Alkaliphilus metalliredigens QYMF	5311257
YP_001319074.1	CDS	Amet_1207	NC_009633.1	1257715	1257915	R	hypothetical protein	complement(1257715..1257915)	Alkaliphilus metalliredigens QYMF	5311258
YP_001319075.1	CDS	Amet_1208	NC_009633.1	1258113	1258637	D	hypothetical protein	1258113..1258637	Alkaliphilus metalliredigens QYMF	5311259
YP_001319076.1	CDS	Amet_1209	NC_009633.1	1258731	1259096	R	hypothetical protein	complement(1258731..1259096)	Alkaliphilus metalliredigens QYMF	5311260
YP_001319077.1	CDS	Amet_1210	NC_009633.1	1259440	1259634	D	hypothetical protein	1259440..1259634	Alkaliphilus metalliredigens QYMF	5311261
YP_001319078.1	CDS	Amet_1211	NC_009633.1	1259737	1261152	D	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: hal:VNG0727C hypothetical protein; MATE efflux family protein	1259737..1261152	Alkaliphilus metalliredigens QYMF	5311262
YP_001319079.1	CDS	Amet_1212	NC_009633.1	1261246	1262103	R	catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin; 2-oxoglutarate ferredoxin oxidoreductase subunit beta	complement(1261246..1262103)	Alkaliphilus metalliredigens QYMF	5311263
YP_001319080.1	CDS	Amet_1213	NC_009633.1	1262104	1263786	R	PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: tte:TTE0961 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein	complement(1262104..1263786)	Alkaliphilus metalliredigens QYMF	5311264
YP_001319081.1	CDS	Amet_1214	NC_009633.1	1264083	1264835	D	PFAM: membrane-bound metal-dependent hydrolase; KEGG: cac:CAC0507 predicted metal-dependent membrane hydrolase; membrane-bound metal-dependent hydrolase	1264083..1264835	Alkaliphilus metalliredigens QYMF	5311265
YP_001319082.1	CDS	Amet_1215	NC_009633.1	1264840	1265148	R	PFAM: branched-chain amino acid transport; KEGG: oih:OB1120 hypothetical protein; branched-chain amino acid transport	complement(1264840..1265148)	Alkaliphilus metalliredigens QYMF	5311266
YP_001319083.1	CDS	Amet_1216	NC_009633.1	1265153	1265896	R	PFAM: AzlC family protein; KEGG: oih:OB1119 branched-chain amino acid transporter; AzlC family protein	complement(1265153..1265896)	Alkaliphilus metalliredigens QYMF	5311267
YP_001319084.1	CDS	Amet_1217	NC_009633.1	1266156	1266875	D	PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sth:STH2778 hypothetical protein; hydrolase	1266156..1266875	Alkaliphilus metalliredigens QYMF	5311268
YP_001319085.1	CDS	Amet_1218	NC_009633.1	1267024	1267452	D	PFAM: Domain of unknown function DUF1893; KEGG: bfr:BF4297 putative TonB-dependent outer membrane receptor; hypothetical protein	1267024..1267452	Alkaliphilus metalliredigens QYMF	5311269
YP_001319086.1	CDS	Amet_1219	NC_009633.1	1267606	1267926	D	hypothetical protein	1267606..1267926	Alkaliphilus metalliredigens QYMF	5311270
YP_001319087.1	CDS	Amet_1220	NC_009633.1	1267936	1268772	D	SMART: RNA binding S1 domain protein; KEGG: cno:NT01CX_0180 S1 RNA binding domain; RNA-binding S1 domain-containing protein	1267936..1268772	Alkaliphilus metalliredigens QYMF	5311271
YP_001319088.1	CDS	Amet_1221	NC_009633.1	1268798	1269172	D	PFAM: protein of unknown function DUF322; KEGG: sth:STH1852 putative alkaline-shock protein; hypothetical protein	1268798..1269172	Alkaliphilus metalliredigens QYMF	5311272
YP_001319089.1	CDS	Amet_1222	NC_009633.1	1269617	1270003	R	KEGG: ddi:DDB_0231185 actin-binding protein; hypothetical protein	complement(1269617..1270003)	Alkaliphilus metalliredigens QYMF	5311273
YP_001319090.1	CDS	Amet_1223	NC_009633.1	1270185	1270415	R	TIGRFAM: acyl carrier protein; PFAM: phosphopantetheine-binding; KEGG: cac:CAC1747 acyl carrier protein, ACP; acyl carrier protein	complement(1270185..1270415)	Alkaliphilus metalliredigens QYMF	5311274
YP_001319091.1	CDS	Amet_1224	NC_009633.1	1270672	1271010	D	PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: chy:CHY_2597 putative rubredoxin; rubredoxin-type Fe(Cys)4 protein	1270672..1271010	Alkaliphilus metalliredigens QYMF	5311275
YP_001319092.1	CDS	Amet_1225	NC_009633.1	1271257	1272882	D	TIGRFAM: Na/Pi-cotransporter II-related protein; PFAM: Na+/Pi-cotransporter; PhoU family protein; KEGG: cno:NT01CX_1154 Na/Pi cotransporter family protein; Na/Pi-cotransporter II-like protein	1271257..1272882	Alkaliphilus metalliredigens QYMF	5311276
YP_001319093.1	CDS	Amet_1226	NC_009633.1	1273222	1274040	D	TIGRFAM: cyanophycinase; PFAM: peptidase S51, dipeptidase E; KEGG: swo:Swol_1351 cyanophycinase; cyanophycinase	1273222..1274040	Alkaliphilus metalliredigens QYMF	5311277
YP_001319094.1	CDS	Amet_1227	NC_009633.1	1274085	1276748	D	catalyze the formation of cyanophycin which may act to store excess nitrogen; cyanophycin synthetase	1274085..1276748	Alkaliphilus metalliredigens QYMF	5311278
YP_001319095.1	CDS	Amet_1228	NC_009633.1	1276958	1277683	D	TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: cac:CAC0263 phosphoserine phosphatase related protein; HAD family hydrolase	1276958..1277683	Alkaliphilus metalliredigens QYMF	5311279
YP_001319096.1	CDS	Amet_1229	NC_009633.1	1277941	1278258	D	PFAM: regulatory protein, ArsR; KEGG: dsy:DSY4143 hypothetical protein; regulatory protein ArsR	1277941..1278258	Alkaliphilus metalliredigens QYMF	5311280
YP_001319097.1	CDS	Amet_1230	NC_009633.1	1278279	1279262	D	PFAM: permease; KEGG: mmp:MMP0202 hypothetical protein; permease	1278279..1279262	Alkaliphilus metalliredigens QYMF	5311281
YP_001319098.1	CDS	Amet_1231	NC_009633.1	1279341	1279577	D	TIGRFAM: redox-active disulfide protein 2; KEGG: chy:CHY_1096 redox-active disulfide protein 2; redox-active disulfide protein 2	1279341..1279577	Alkaliphilus metalliredigens QYMF	5311282
YP_001319099.1	CDS	Amet_1232	NC_009633.1	1279779	1281653	R	PFAM: transposase, IS4 family protein; KEGG: tte:TTE2604 transposase; transposase, IS4 family protein	complement(1279779..1281653)	Alkaliphilus metalliredigens QYMF	5311283
YP_001319100.1	CDS	Amet_1234	NC_009633.1	1281971	1283011	R	PFAM: ApbE family lipoprotein; KEGG: cpe:CPE2227 thiamin biosynthesis lipoprotein; ApbE family lipoprotein	complement(1281971..1283011)	Alkaliphilus metalliredigens QYMF	5311285
YP_001319101.1	CDS	Amet_1235	NC_009633.1	1283089	1283562	R	PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5	complement(1283089..1283562)	Alkaliphilus metalliredigens QYMF	5311286
YP_001319102.1	CDS	Amet_1236	NC_009633.1	1283737	1284579	D	PFAM: Peptidoglycan-binding domain 1 protein; ErfK/YbiS/YcfS/YnhG family protein; KEGG: swo:Swol_1663 ErfK/YbiS/YcfS/YnhG; ErfK/YbiS/YcfS/YnhG family protein	1283737..1284579	Alkaliphilus metalliredigens QYMF	5311287
YP_001319103.1	CDS	Amet_1237	NC_009633.1	1284795	1285454	D	PFAM: Di-trans-poly-cis-decaprenylcistransferase; KEGG: cac:CAC1432 undecaprenyl pyrophosphate synthase related enzyme; di-trans-poly-cis-decaprenylcistransferase	1284795..1285454	Alkaliphilus metalliredigens QYMF	5311288
YP_001319104.1	CDS	Amet_1238	NC_009633.1	1285628	1285876	D	KEGG: chy:CHY_0565 putative mercuric transport protein, selenocysteine-containing; putative mercuric transport protein, selenocysteine-containing	1285628..1285876	Alkaliphilus metalliredigens QYMF	5311289
YP_001319105.1	CDS	Amet_1239	NC_009633.1	1286038	1286418	D	PFAM: FMN-binding domain protein; KEGG: dsy:DSY3139 putative fumarate reductase flavoprotein subunit; FMN-binding domain-containing protein	1286038..1286418	Alkaliphilus metalliredigens QYMF	5311290
YP_001319106.1	CDS	Amet_1240	NC_009633.1	1286963	1287703	R	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bca:BCE_3546 amino acid ABC transporter-like protein; ABC transporter-like protein	complement(1286963..1287703)	Alkaliphilus metalliredigens QYMF	5311291
YP_001319107.1	CDS	Amet_1241	NC_009633.1	1287727	1288410	R	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bca:BCE_3547 amino acid ABC transproter, permease protein VC0009 [imported]; polar amino acid ABC transporter inner membrane subunit	complement(1287727..1288410)	Alkaliphilus metalliredigens QYMF	5311292
YP_001319108.1	CDS	Amet_1242	NC_009633.1	1288431	1289240	R	PFAM: extracellular solute-binding protein, family 3; KEGG: cpr:CPR_2062 glutamine-binding periplasmic protein of glutamine ABC transporter; extracellular solute-binding protein	complement(1288431..1289240)	Alkaliphilus metalliredigens QYMF	5311293
YP_001319109.1	CDS	Amet_1243	NC_009633.1	1289622	1290350	D	PFAM: amino acid-binding ACT domain protein; MgtC/SapB transporter; KEGG: cth:Cthe_1919 MgtC/SapB transporter; MgtC/SapB transporter	1289622..1290350	Alkaliphilus metalliredigens QYMF	5311294
YP_001319110.1	CDS	Amet_1244	NC_009633.1	1290603	1290932	D	hypothetical protein	1290603..1290932	Alkaliphilus metalliredigens QYMF	5311295
YP_001319111.1	CDS	Amet_1246	NC_009633.1	1291297	1293171	D	PFAM: transposase, IS4 family protein; KEGG: tte:TTE2604 transposase; transposase, IS4 family protein	1291297..1293171	Alkaliphilus metalliredigens QYMF	5311297
YP_001319112.1	CDS	Amet_1247	NC_009633.1	1293285	1293920	R	TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; KEGG: cac:CAC0495 thiamine monophosphate synthase; thiamine-phosphate pyrophosphorylase	complement(1293285..1293920)	Alkaliphilus metalliredigens QYMF	5311298
YP_001319113.1	CDS	Amet_1248	NC_009633.1	1293904	1294722	R	PFAM: hydroxyethylthiazole kinase; KEGG: ctc:CTC01752 hydroxyethylthiazole kinase; hydroxyethylthiazole kinase	complement(1293904..1294722)	Alkaliphilus metalliredigens QYMF	5311299
YP_001319114.1	CDS	Amet_1249	NC_009633.1	1294747	1295547	R	TIGRFAM: phosphomethylpyrimidine kinase; PFAM: protein of unknown function UPF0031; Phosphomethylpyrimidine kinase type-1; KEGG: ctc:CTC01753 hydroxymethylpyrimidine kinase; phosphomethylpyrimidine kinase	complement(1294747..1295547)	Alkaliphilus metalliredigens QYMF	5311300
YP_001319115.1	CDS	Amet_1250	NC_009633.1	1295565	1296041	R	TIGRFAM: thiW protein; KEGG: ctc:CTC01754 hypothetical protein; thiW protein	complement(1295565..1296041)	Alkaliphilus metalliredigens QYMF	5311301
YP_001319116.1	CDS	Amet_1251	NC_009633.1	1296501	1297589	D	PFAM: dehydrogenase, E1 component; KEGG: ayw:AYWB_136 pyruvate dehydrogenase E1 component alpha subunit; pyruvate dehydrogenase	1296501..1297589	Alkaliphilus metalliredigens QYMF	5311302
YP_001319117.1	CDS	Amet_1252	NC_009633.1	1297589	1298572	D	PFAM: Transketolase, central region; Transketolase domain protein; KEGG: mhp:MHP7448_0116 pyruvate dehydrogenase; transketolase, central region	1297589..1298572	Alkaliphilus metalliredigens QYMF	5311303
YP_001319118.1	CDS	Amet_1253	NC_009633.1	1298588	1299904	D	PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: bcl:ABC2418 pyruvate dehydrogenase E2 component; dehydrogenase catalytic domain-containing protein	1298588..1299904	Alkaliphilus metalliredigens QYMF	5311304
YP_001319119.1	CDS	Amet_1254	NC_009633.1	1299950	1301323	D	TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: ayw:AYWB_139 dihydrolipoamide dehydrogenase; dihydrolipoamide dehydrogenase	1299950..1301323	Alkaliphilus metalliredigens QYMF	5311305
YP_001319120.1	CDS	Amet_1255	NC_009633.1	1301531	1302745	D	PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: sat:SYN_00230 response regulator receiver domain and a sigma factor phosphatase domain; response regulator receiver protein	1301531..1302745	Alkaliphilus metalliredigens QYMF	5311306
YP_001319121.1	CDS	Amet_1256	NC_009633.1	1302920	1305091	D	PFAM: GAF domain protein; histidine kinase, HAMP region domain protein; metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: gme:Gmet_0849 metal dependent phosphohydrolase; metal dependent phosphohydrolase	1302920..1305091	Alkaliphilus metalliredigens QYMF	5311307
YP_001319122.1	CDS	Amet_1257	NC_009633.1	1305163	1305654	D	PFAM: CAT RNA-binding domain protein; PRD domain protein; KEGG: bcl:ABC0193 transcriptional antiterminator, BglG family; transcriptional antiterminator BglG	1305163..1305654	Alkaliphilus metalliredigens QYMF	5311308
YP_001319123.1	CDS	Amet_1258	NC_009633.1	1305913	1306176	D	TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: cte:CT2211 phosphocarrier protein HPr; phosphotransferase system, phosphocarrier protein HPr	1305913..1306176	Alkaliphilus metalliredigens QYMF	5311309
YP_001319124.1	CDS	Amet_1259	NC_009633.1	1306187	1307902	D	TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein, mobile region; PEP-utilising protein domain protein; KEGG: tte:TTE2334 phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); phosphoenolpyruvate-protein phosphotransferase	1306187..1307902	Alkaliphilus metalliredigens QYMF	5311310
YP_001319125.1	CDS	Amet_1260	NC_009633.1	1308073	1308834	D	PFAM: regulatory protein, IclR; Transcriptional regulator IclR-like; KEGG: cno:NT01CX_1476 transcription regulator (IclR family) BH2137; transcriptional regulator IclR-like protein	1308073..1308834	Alkaliphilus metalliredigens QYMF	5311311
YP_001319126.1	CDS	Amet_1261	NC_009633.1	1309047	1309706	D	TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; KEGG: cno:NT01CX_1477 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase, putative; 2-dehydro-3-deoxyphosphogluconate aldolase	1309047..1309706	Alkaliphilus metalliredigens QYMF	5311312
YP_001319127.1	CDS	Amet_1262	NC_009633.1	1309739	1310761	D	PFAM: PfkB domain protein; KEGG: bth:BT_0488 2-dehydro-3-deoxygluconokinase; ribokinase-like domain-containing protein	1309739..1310761	Alkaliphilus metalliredigens QYMF	5311313
YP_001319128.1	CDS	Amet_1263	NC_009633.1	1310968	1311651	D	PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: cno:NT01CX_1479 transcriptional regulator, GntR family, putative; GntR family transcriptional regulator	1310968..1311651	Alkaliphilus metalliredigens QYMF	5311314
YP_001319129.1	CDS	Amet_1264	NC_009633.1	1311895	1312608	D	PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: cno:NT01CX_1479 transcriptional regulator, GntR family, putative; GntR family transcriptional regulator	1311895..1312608	Alkaliphilus metalliredigens QYMF	5311315
YP_001319130.1	CDS	Amet_1265	NC_009633.1	1312761	1313243	D	KEGG: dsy:DSY3247 hypothetical protein; hypothetical protein	1312761..1313243	Alkaliphilus metalliredigens QYMF	5311316
YP_001319131.1	CDS	Amet_1266	NC_009633.1	1313392	1314399	D	PFAM: Uncharacterized protein UPF0065; KEGG: reh:H16_B1820 probable extra-cytoplasmic solute receptor; hypothetical protein	1313392..1314399	Alkaliphilus metalliredigens QYMF	5311317
YP_001319132.1	CDS	Amet_1267	NC_009633.1	1314578	1316062	D	PFAM: protein of unknown function DUF112, transmembrane; KEGG: jan:Jann_1159 protein of unknown function DUF112, transmembrane; hypothetical protein	1314578..1316062	Alkaliphilus metalliredigens QYMF	5311318
YP_001319133.1	CDS	Amet_1268	NC_009633.1	1316192	1317910	D	PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; KEGG: cno:NT01CX_1480 dihydroxyacid dehydratase; dihydroxy-acid dehydratase	1316192..1317910	Alkaliphilus metalliredigens QYMF	5311319
YP_001319134.1	CDS	Amet_1269	NC_009633.1	1318293	1320242	D	PFAM: glutamine synthetase, catalytic region; KEGG: cno:NT01CX_0655 glutamine synthetase; glutamine synthetase	1318293..1320242	Alkaliphilus metalliredigens QYMF	5311320
YP_001319135.1	CDS	Amet_1270	NC_009633.1	1320401	1320853	D	KEGG: gfo:orf3266 hypothetical protein; hypothetical protein	1320401..1320853	Alkaliphilus metalliredigens QYMF	5311321
YP_001319136.1	CDS	Amet_1271	NC_009633.1	1320886	1321284	D	hypothetical protein	1320886..1321284	Alkaliphilus metalliredigens QYMF	5311322
YP_001319137.1	CDS	Amet_1272	NC_009633.1	1321397	1322140	R	KEGG: ctc:CTC00445 putative metal dependent hydrolase; putative metal dependent hydrolase	complement(1321397..1322140)	Alkaliphilus metalliredigens QYMF	5311323
YP_001319138.1	CDS	Amet_1273	NC_009633.1	1322274	1322966	D	PFAM: SNARE associated Golgi protein; KEGG: vfi:VFA0098 transporter; hypothetical protein	1322274..1322966	Alkaliphilus metalliredigens QYMF	5311324
YP_001319139.1	CDS	Amet_1274	NC_009633.1	1323124	1325091	D	PFAM: GAF domain protein; metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: syn:slr2100 two-component response regulator; metal dependent phosphohydrolase	1323124..1325091	Alkaliphilus metalliredigens QYMF	5311325
YP_001319140.1	CDS	Amet_1275	NC_009633.1	1325392	1326942	D	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; SMART: PAC repeat-containing protein; KEGG: cno:NT01CX_0224 sensory transduction histidine kinase; multi-sensor signal transduction histidine kinase	1325392..1326942	Alkaliphilus metalliredigens QYMF	5311326
YP_001319141.1	CDS	Amet_1276	NC_009633.1	1327188	1328009	R	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cth:Cthe_2574 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein	complement(1327188..1328009)	Alkaliphilus metalliredigens QYMF	5311327
YP_001319142.1	CDS	Amet_1278	NC_009633.1	1328598	1330013	D	PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; KEGG: cno:NT01CX_0224 sensory transduction histidine kinase; integral membrane sensor signal transduction histidine kinase	1328598..1330013	Alkaliphilus metalliredigens QYMF	5311329
YP_001319143.1	CDS	Amet_1279	NC_009633.1	1330231	1330740	R	KEGG: dsy:DSY1430 hypothetical protein; hypothetical protein	complement(1330231..1330740)	Alkaliphilus metalliredigens QYMF	5311330
YP_001319144.1	CDS	Amet_1280	NC_009633.1	1331113	1331583	D	KEGG: cpf:CPF_1814 hypothetical protein; hypothetical protein	1331113..1331583	Alkaliphilus metalliredigens QYMF	5311331
YP_001319145.1	CDS	Amet_1281	NC_009633.1	1331585	1332250	D	PFAM: Accessory gene regulator B; KEGG: cpf:CPF_1813 putative accessory gene regulator protein B; accessory gene regulator B	1331585..1332250	Alkaliphilus metalliredigens QYMF	5311332
YP_001319146.1	CDS	Amet_1282	NC_009633.1	1332535	1333233	R	PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; KEGG: cno:NT01CX_0653 peptidyl-prolyl cis-trans isomerase; peptidyl-prolyl isomerase	complement(1332535..1333233)	Alkaliphilus metalliredigens QYMF	5311333
YP_001319147.1	CDS	Amet_1283	NC_009633.1	1333357	1334454	R	TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: swo:Swol_1192 hypothetical protein; spore germination protein	complement(1333357..1334454)	Alkaliphilus metalliredigens QYMF	5311334
YP_001319148.1	CDS	Amet_1284	NC_009633.1	1334689	1335846	R	PFAM: spore germination B3 GerAC family protein; KEGG: dsy:DSY4477 hypothetical protein; spore germination B3 GerAC family protein	complement(1334689..1335846)	Alkaliphilus metalliredigens QYMF	5311335
YP_001319149.1	CDS	Amet_1285	NC_009633.1	1335885	1337432	R	PFAM: GerA spore germination protein; KEGG: cac:CA_P0020 spore germination protein, GrkA; GerA spore germination protein	complement(1335885..1337432)	Alkaliphilus metalliredigens QYMF	5311336
YP_001319150.1	CDS	Amet_1286	NC_009633.1	1337559	1339184	R	PFAM: Resolvase, N-terminal domain; Recombinase; KEGG: cno:NT01CX_1710 site-specific recombinases, DNA invertase Pin-like protein; resolvase domain-containing protein	complement(1337559..1339184)	Alkaliphilus metalliredigens QYMF	5311337
YP_001319151.1	CDS	Amet_1287	NC_009633.1	1339369	1339557	D	hypothetical protein	1339369..1339557	Alkaliphilus metalliredigens QYMF	5311338
YP_001319152.1	CDS	Amet_1288	NC_009633.1	1339806	1340804	D	TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: mta:Moth_0422 TRAP dicarboxylate transporter, DctP subunit; TRAP dicarboxylate transporter subunit DctP	1339806..1340804	Alkaliphilus metalliredigens QYMF	5311339
YP_001319153.1	CDS	Amet_1289	NC_009633.1	1341001	1341489	D	PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: mta:Moth_0423 tripartite ATP-independent periplasmic transporter, DctQ component; tripartite ATP-independent periplasmic transporter DctQ	1341001..1341489	Alkaliphilus metalliredigens QYMF	5311340
YP_001319154.1	CDS	Amet_1290	NC_009633.1	1341525	1342802	D	TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: mta:Moth_0424 TRAP dicarboxylate transporter-DctM subunit; TRAP dicarboxylate transporter subunit DctM	1341525..1342802	Alkaliphilus metalliredigens QYMF	5311341
YP_001319155.1	CDS	Amet_1291	NC_009633.1	1342856	1344283	D	catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate; functions in glucuronic and galacturonic metabolism; glucuronate isomerase	1342856..1344283	Alkaliphilus metalliredigens QYMF	5311342
YP_001319156.1	CDS	Amet_1292	NC_009633.1	1344324	1345391	D	catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate; mannonate dehydratase	1344324..1345391	Alkaliphilus metalliredigens QYMF	5311343
YP_001319157.1	CDS	Amet_1293	NC_009633.1	1345470	1347086	D	PFAM: Mannitol dehydrogenase, C-terminal domain; Mannitol dehydrogenase rossman, N-terminal domain; KEGG: mta:Moth_0429 mannitol dehydrogenase; mannitol dehydrogenase domain-containing protein	1345470..1347086	Alkaliphilus metalliredigens QYMF	5311344
YP_001319158.1	CDS	Amet_1294	NC_009633.1	1347178	1347849	D	PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: bha:BH1062 transcriptional regulator (GntR family); GntR family transcriptional regulator	1347178..1347849	Alkaliphilus metalliredigens QYMF	5311345
YP_001319159.1	CDS	Amet_1295	NC_009633.1	1347905	1348519	R	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cno:NT01CX_1707 ABC transporter ATP-binding protein; ABC transporter-like protein	complement(1347905..1348519)	Alkaliphilus metalliredigens QYMF	5311346
YP_001319160.1	CDS	Amet_1296	NC_009633.1	1348710	1348910	R	PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: lwe:lwe2036 cold shock-like protein; cold-shock DNA-binding domain-containing protein	complement(1348710..1348910)	Alkaliphilus metalliredigens QYMF	5311347
YP_001319161.1	CDS	Amet_1297	NC_009633.1	1349166	1349660	D	KEGG: oih:OB1065 hypothetical protein; hypothetical protein	1349166..1349660	Alkaliphilus metalliredigens QYMF	5311348
YP_001319162.1	CDS	Amet_1298	NC_009633.1	1349805	1351019	D	PFAM: beta-lactamase domain protein; KEGG: tte:TTE2430 predicted hydrolase of metallo-beta-lactamase fold; beta-lactamase domain-containing protein	1349805..1351019	Alkaliphilus metalliredigens QYMF	5311349
YP_001319163.1	CDS	Amet_1299	NC_009633.1	1351038	1351238	D	KEGG: tte:TTE2431 hypothetical protein; hypothetical protein	1351038..1351238	Alkaliphilus metalliredigens QYMF	5311350
YP_001319164.1	CDS	Amet_1300	NC_009633.1	1351704	1351883	R	KEGG: cth:Cthe_0921 hypothetical protein; hypothetical protein	complement(1351704..1351883)	Alkaliphilus metalliredigens QYMF	5311351
YP_001319165.1	CDS	Amet_1301	NC_009633.1	1352180	1353484	D	PFAM: glycoside hydrolase, family 3 domain protein; KEGG: cth:Cthe_0322 glycoside hydrolase, family 3-like protein; glycoside hydrolase family protein	1352180..1353484	Alkaliphilus metalliredigens QYMF	5311352
YP_001319166.1	CDS	Amet_1302	NC_009633.1	1353671	1355002	D	TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp; KEGG: chy:CHY_0704 glutamine synthetase; glutamine synthetase, type I	1353671..1355002	Alkaliphilus metalliredigens QYMF	5311353
YP_001319167.1	CDS	Amet_1303	NC_009633.1	1355292	1355999	D	PFAM: response regulator receiver; KEGG: bha:BH2751 two-component response regulator; fused response regulator receiver/hypothetical protein	1355292..1355999	Alkaliphilus metalliredigens QYMF	5311354
YP_001319168.1	CDS	Amet_1304	NC_009633.1	1356257	1357429	D	PFAM: malic protein domain protein; malic protein, NAD-binding; KEGG: bce:BC4604 NAD-dependent malic enzyme; malate dehydrogenase	1356257..1357429	Alkaliphilus metalliredigens QYMF	5311355
YP_001319169.1	CDS	Amet_1305	NC_009633.1	1357426	1358295	D	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cno:NT01CX_0172 oxygen-independent coproporphyrinogen III oxidase, Fe-S oxidoreductase; radical SAM domain-containing protein	1357426..1358295	Alkaliphilus metalliredigens QYMF	5311356
YP_001319170.1	CDS	Amet_1306	NC_009633.1	1358527	1358991	D	hypothetical protein	1358527..1358991	Alkaliphilus metalliredigens QYMF	5311357
YP_001319171.1	CDS	Amet_1307	NC_009633.1	1359530	1361404	D	PFAM: transposase, IS4 family protein; KEGG: tte:TTE2604 transposase; transposase, IS4 family protein	1359530..1361404	Alkaliphilus metalliredigens QYMF	5311358
YP_001319172.1	CDS	Amet_1309	NC_009633.1	1362943	1363464	D	hypothetical protein	1362943..1363464	Alkaliphilus metalliredigens QYMF	5311360
YP_001319173.1	CDS	Amet_1310	NC_009633.1	1363730	1363945	D	hypothetical protein	1363730..1363945	Alkaliphilus metalliredigens QYMF	5311361
YP_001319174.1	CDS	Amet_1311	NC_009633.1	1364039	1364269	R	hypothetical protein	complement(1364039..1364269)	Alkaliphilus metalliredigens QYMF	5311362
YP_001319175.1	CDS	Amet_1312	NC_009633.1	1364315	1366189	R	PFAM: transposase, IS4 family protein; KEGG: tte:TTE2604 transposase; transposase, IS4 family protein	complement(1364315..1366189)	Alkaliphilus metalliredigens QYMF	5311363
YP_001319176.1	CDS	Amet_1313	NC_009633.1	1366339	1366710	R	hypothetical protein	complement(1366339..1366710)	Alkaliphilus metalliredigens QYMF	5311364
YP_001319177.1	CDS	Amet_1315	NC_009633.1	1367159	1367572	D	KEGG: dsy:DSY4612 hypothetical protein; hypothetical protein	1367159..1367572	Alkaliphilus metalliredigens QYMF	5311366
YP_001319178.1	CDS	Amet_1317	NC_009633.1	1368313	1369914	D	TIGRFAM: integral membrane protein MviN; PFAM: multi antimicrobial extrusion protein MatE; virulence factor MVIN family protein; KEGG: tte:TTE0176 uncharacterized membrane protein, putative virulence factor; integral membrane protein MviN	1368313..1369914	Alkaliphilus metalliredigens QYMF	5311368
YP_001319179.1	CDS	Amet_1318	NC_009633.1	1369934	1370320	D	PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: dsy:DSY3258 hypothetical protein; MazG nucleotide pyrophosphohydrolase	1369934..1370320	Alkaliphilus metalliredigens QYMF	5311369
YP_001319180.1	CDS	Amet_1319	NC_009633.1	1370383	1371393	R	PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: cac:CAC0972 isocitrate dehydrogenase; isocitrate dehydrogenase (NAD(+))	complement(1370383..1371393)	Alkaliphilus metalliredigens QYMF	5311370
YP_001319181.1	CDS	Amet_1320	NC_009633.1	1371394	1373331	R	Catalyzes the conversion of citrate to isocitrate; aconitate hydratase	complement(1371394..1373331)	Alkaliphilus metalliredigens QYMF	5311371
YP_001319182.1	CDS	aksA	NC_009633.1	1373366	1374508	R	in Methanococcus jannaschii this protein catalyzes the condensation of alpha-ketoglutarate and acetyl-CoA to form trans-homoaconitate; functions in alphaketosuberate synthesis which is a precursor in coenzyme B and biotin synthesis; trans-homoaconitate synthase	complement(1373366..1374508)	Alkaliphilus metalliredigens QYMF	5311372
YP_001319183.1	CDS	Amet_1322	NC_009633.1	1374797	1374997	D	hypothetical protein	1374797..1374997	Alkaliphilus metalliredigens QYMF	5311373
YP_001319184.1	CDS	Amet_1323	NC_009633.1	1375043	1375417	D	PFAM: regulatory protein GntR, HTH; protein of unknown function UPF0074; KEGG: gka:GK1620 transcriptional regulator (GntR family); regulatory protein GntR	1375043..1375417	Alkaliphilus metalliredigens QYMF	5311374
YP_001319185.1	CDS	Amet_1324	NC_009633.1	1375419	1376318	D	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gka:GK1621 ABC transporter (ATP-binding protein); ABC transporter-like protein	1375419..1376318	Alkaliphilus metalliredigens QYMF	5311375
YP_001319186.1	CDS	Amet_1325	NC_009633.1	1376293	1378275	D	KEGG: gka:GK1622 hypothetical protein; hypothetical protein	1376293..1378275	Alkaliphilus metalliredigens QYMF	5311376
YP_001319187.1	CDS	Amet_1326	NC_009633.1	1378541	1379296	R	TIGRFAM: phosphonate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bha:BH0440 phosphonate transport system ATP-binding protein; phosphonate ABC transporter ATPase	complement(1378541..1379296)	Alkaliphilus metalliredigens QYMF	5311377
YP_001319188.1	CDS	Amet_1327	NC_009633.1	1379299	1380105	R	TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pau:PA14_20330 phosphonate ABC tranporter permease protein; phosphonate ABC transporter inner membrane protein	complement(1379299..1380105)	Alkaliphilus metalliredigens QYMF	5311378
YP_001319189.1	CDS	Amet_1328	NC_009633.1	1380112	1381020	R	TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: maq:Maqu_3992 phosphonate ABC transporter, periplasmic phosphonate-binding protein; phosphonate ABC transporter periplasmic phosphonate-binding protein	complement(1380112..1381020)	Alkaliphilus metalliredigens QYMF	5311379
YP_001319190.1	CDS	Amet_1329	NC_009633.1	1381396	1382079	D	PFAM: cytoplasmic chaperone TorD family protein; KEGG: mta:Moth_1390 cytoplasmic chaperone TorD; cytoplasmic chaperone TorD family protein	1381396..1382079	Alkaliphilus metalliredigens QYMF	5311380
YP_001319191.1	CDS	Amet_1330	NC_009633.1	1382136	1384700	D	PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: sth:STH713 anaerobic dimethyl sulfoxide reductase subunit A; molybdopterin oxidoreductase	1382136..1384700	Alkaliphilus metalliredigens QYMF	5311381
YP_001319192.1	CDS	Amet_1331	NC_009633.1	1384797	1385330	D	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mta:Moth_1388 4Fe-4S ferredoxin, iron-sulfur binding; 4Fe-4S ferredoxin	1384797..1385330	Alkaliphilus metalliredigens QYMF	5311382
YP_001319193.1	CDS	Amet_1332	NC_009633.1	1385371	1386447	D	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: chy:CHY_0869 iron-sulfur cluster-binding protein; 4Fe-4S ferredoxin	1385371..1386447	Alkaliphilus metalliredigens QYMF	5311383
YP_001319194.1	CDS	Amet_1333	NC_009633.1	1386618	1387286	D	KEGG: dsy:DSY4458 hypothetical protein; hypothetical protein	1386618..1387286	Alkaliphilus metalliredigens QYMF	5311384
YP_001319195.1	CDS	Amet_1334	NC_009633.1	1387519	1388760	D	PFAM: HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: dsy:DSY2873 hypothetical protein; hypothetical protein	1387519..1388760	Alkaliphilus metalliredigens QYMF	5311385
YP_001319196.1	CDS	Amet_1335	NC_009633.1	1388808	1390403	D	KEGG: llm:llmg_1314 conserved hypothetical protein; hypothetical protein	1388808..1390403	Alkaliphilus metalliredigens QYMF	5311386
YP_001319197.1	CDS	Amet_1336	NC_009633.1	1390472	1390996	R	hypothetical protein	complement(1390472..1390996)	Alkaliphilus metalliredigens QYMF	5311387
YP_001319198.1	CDS	Amet_1337	NC_009633.1	1391136	1391624	R	KEGG: dsy:DSY0802 hypothetical protein; hypothetical protein	complement(1391136..1391624)	Alkaliphilus metalliredigens QYMF	5311388
YP_001319199.1	CDS	Amet_1339	NC_009633.1	1391991	1392593	D	PFAM: regulatory protein, TetR; KEGG: mmp:MMP0840 transcriptional regulator, TetR family member; TetR family transcriptional regulator	1391991..1392593	Alkaliphilus metalliredigens QYMF	5311390
YP_001319200.1	CDS	Amet_1340	NC_009633.1	1392700	1393890	D	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: cno:NT01CX_1548 HlyD family secretion protein, putative; RND family efflux transporter MFP subunit	1392700..1393890	Alkaliphilus metalliredigens QYMF	5311391
YP_001319201.1	CDS	Amet_1341	NC_009633.1	1393904	1396975	D	PFAM: acriflavin resistance protein; KEGG: dsy:DSY2068 hypothetical protein; acriflavin resistance protein	1393904..1396975	Alkaliphilus metalliredigens QYMF	5311392
YP_001319202.1	CDS	Amet_1343	NC_009633.1	1397511	1398755	D	PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: cno:NT01CX_1509 integral membrane protein with CBS domains; hypothetical protein	1397511..1398755	Alkaliphilus metalliredigens QYMF	5311394
YP_001319203.1	CDS	Amet_1344	NC_009633.1	1398991	1399254	D	hypothetical protein	1398991..1399254	Alkaliphilus metalliredigens QYMF	5311395
YP_001319204.1	CDS	Amet_1345	NC_009633.1	1399318	1400649	R	PFAM: aminotransferase, class V; KEGG: dsy:DSY0801 hypothetical protein; cysteine desulfurase	complement(1399318..1400649)	Alkaliphilus metalliredigens QYMF	5311396
YP_001319205.1	CDS	Amet_1346	NC_009633.1	1400775	1401284	R	PFAM: Ferritin, Dps family protein; KEGG: chy:CHY_0102 ferritin; Ferritin, Dps family protein	complement(1400775..1401284)	Alkaliphilus metalliredigens QYMF	5311397
YP_001319206.1	CDS	Amet_1347	NC_009633.1	1401685	1402566	D	TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase, type 3; KEGG: cac:CAC0698 predicted hydrolase of the HAD superfamily; cof family hydrolase	1401685..1402566	Alkaliphilus metalliredigens QYMF	5311398
YP_001319207.1	CDS	Amet_1348	NC_009633.1	1402808	1404256	D	TIGRFAM: flavocytochrome c; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ctc:CTC01522 fumarate reductase flavoprotein; flavocytochrome c	1402808..1404256	Alkaliphilus metalliredigens QYMF	5311399
YP_001319208.1	CDS	Amet_1349	NC_009633.1	1404524	1405333	D	PFAM: PfkB domain protein; KEGG: yhfQ; putative kinase; ribokinase-like domain-containing protein	1404524..1405333	Alkaliphilus metalliredigens QYMF	5311400
YP_001319209.1	CDS	Amet_1350	NC_009633.1	1405434	1405829	D	hypothetical protein	1405434..1405829	Alkaliphilus metalliredigens QYMF	5311401
YP_001319210.1	CDS	Amet_1351	NC_009633.1	1405886	1406803	D	KEGG: cpe:CPE1290 hypothetical protein; hypothetical protein	1405886..1406803	Alkaliphilus metalliredigens QYMF	5311402
YP_001319211.1	CDS	Amet_1352	NC_009633.1	1406947	1408224	D	KEGG: cpf:CPF_1917 CapA domain protein; CapA domain-containing protein	1406947..1408224	Alkaliphilus metalliredigens QYMF	5311403
YP_001319212.1	CDS	Amet_1353	NC_009633.1	1408435	1409955	D	PFAM: Xanthine/uracil/vitamin C permease; KEGG: bha:BH1513 hypothetical protein; xanthine/uracil/vitamin C permease	1408435..1409955	Alkaliphilus metalliredigens QYMF	5311404
YP_001319213.1	CDS	gcvT	NC_009633.1	1410254	1411363	D	catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T	1410254..1411363	Alkaliphilus metalliredigens QYMF	5311405
YP_001319214.1	CDS	Amet_1355	NC_009633.1	1411388	1411771	D	part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H	1411388..1411771	Alkaliphilus metalliredigens QYMF	5311406
YP_001319215.1	CDS	Amet_1356	NC_009633.1	1411773	1413116	D	acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 2 to form the P protein; glycine dehydrogenase subunit 1	1411773..1413116	Alkaliphilus metalliredigens QYMF	5311407
YP_001319216.1	CDS	Amet_1357	NC_009633.1	1413113	1414573	D	acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein; glycine dehydrogenase subunit 2	1413113..1414573	Alkaliphilus metalliredigens QYMF	5311408
YP_001319217.1	CDS	Amet_1358	NC_009633.1	1415263	1419567	D	TIGRFAM: putative CoA-substrate-specific enzyme activase; PFAM: ATPase, BadF/BadG/BcrA/BcrD type; KEGG: cth:Cthe_1329 putative CoA-substrate-specific enzyme activase; putative CoA-substrate-specific enzyme activase	1415263..1419567	Alkaliphilus metalliredigens QYMF	5311409
YP_001319218.1	CDS	Amet_1359	NC_009633.1	1419653	1420213	R	PFAM: Hemerythrin HHE cation binding domain protein; KEGG: ctc:CTC01607 hypothetical protein; hemerythrin HHE cation binding domain-containing protein	complement(1419653..1420213)	Alkaliphilus metalliredigens QYMF	5311410
YP_001319219.1	CDS	Amet_1360	NC_009633.1	1420403	1421173	D	KEGG: lwe:lwe1368 hypothetical protein; metal-dependent protein-like protein	1420403..1421173	Alkaliphilus metalliredigens QYMF	5311411
YP_001319220.1	CDS	Amet_1361	NC_009633.1	1421206	1421559	R	KEGG: cno:NT01CX_0507 hypothetical protein; hypothetical protein	complement(1421206..1421559)	Alkaliphilus metalliredigens QYMF	5311412
YP_001319221.1	CDS	Amet_1362	NC_009633.1	1421720	1422376	R	KEGG: cpe:CPE1479 hypothetical protein; hypothetical protein	complement(1421720..1422376)	Alkaliphilus metalliredigens QYMF	5311413
YP_001319222.1	CDS	Amet_1363	NC_009633.1	1422607	1422855	D	hypothetical protein	1422607..1422855	Alkaliphilus metalliredigens QYMF	5311414
YP_001319223.1	CDS	Amet_1364	NC_009633.1	1423040	1423267	D	PFAM: small acid-soluble spore protein, alpha/beta type; KEGG: sth:STH1431 small acid-soluble spore protein; alpha/beta type small acid-soluble spore protein	1423040..1423267	Alkaliphilus metalliredigens QYMF	5311415
YP_001319224.1	CDS	Amet_1365	NC_009633.1	1423511	1424644	D	PFAM: cell cycle protein; KEGG: tte:TTE0905 Bacterial cell division membrane protein; cell cycle protein	1423511..1424644	Alkaliphilus metalliredigens QYMF	5311416
YP_001319225.1	CDS	Amet_1366	NC_009633.1	1424862	1426220	D	TIGRFAM: magnesium transporter; PFAM: CBS domain containing protein; MgtE integral membrane region; MgtE intracellular region; KEGG: cth:Cthe_1939 magnesium transporter; magnesium transporter	1424862..1426220	Alkaliphilus metalliredigens QYMF	5311417
YP_001319226.1	CDS	Amet_1367	NC_009633.1	1426342	1427025	D	TIGRFAM: Spore cortex-lytic enzyme SleB; PFAM: Peptidoglycan-binding domain 1 protein; cell wall hydrolase, SleB; KEGG: sth:STH2958 spore cortex-lytic enzyme precursor; spore cortex-lytic enzyme SleB	1426342..1427025	Alkaliphilus metalliredigens QYMF	5311418
YP_001319227.1	CDS	Amet_1368	NC_009633.1	1427043	1428392	D	TIGRFAM: Spore germination YpeB; PFAM: Propeptide, PepSY amd peptidase M4; KEGG: cth:Cthe_2416 propeptide, PepSY amd peptidase M4; spore germination YpeB	1427043..1428392	Alkaliphilus metalliredigens QYMF	5311419
YP_001319228.1	CDS	Amet_1369	NC_009633.1	1428625	1429479	R	KEGG: bce:BC0877 IG hypothetical 16724; hypothetical protein	complement(1428625..1429479)	Alkaliphilus metalliredigens QYMF	5311420
YP_001319229.1	CDS	Amet_1370	NC_009633.1	1429864	1430496	D	PFAM: Collagen triple helix repeat; KEGG: gka:GK2100 hypothetical protein; triple helix repeat-containing collagen	1429864..1430496	Alkaliphilus metalliredigens QYMF	5311421
YP_001319230.1	CDS	Amet_1371	NC_009633.1	1430693	1431061	D	KEGG: cth:Cthe_2090 hypothetical protein; hypothetical protein	1430693..1431061	Alkaliphilus metalliredigens QYMF	5311422
YP_001319231.1	CDS	Amet_1372	NC_009633.1	1431076	1432440	R	PFAM: transposase, IS4 family protein; KEGG: wol:WD0563 transposase, IS4 family; transposase, IS4 family protein	complement(1431076..1432440)	Alkaliphilus metalliredigens QYMF	5311423
YP_001319232.1	CDS	Amet_1373	NC_009633.1	1432643	1433455	D	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: ppd:Ppro_0307 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin	1432643..1433455	Alkaliphilus metalliredigens QYMF	5311424
YP_001319233.1	CDS	Amet_1374	NC_009633.1	1433525	1434115	R	hypothetical protein	complement(1433525..1434115)	Alkaliphilus metalliredigens QYMF	5311425
YP_001319234.1	CDS	Amet_1375	NC_009633.1	1434336	1435688	D	PFAM: phosphoglucose isomerase (PGI); KEGG: btl:BALH_4440 glucose-6-phosphate isomerase; glucose-6-phosphate isomerase	1434336..1435688	Alkaliphilus metalliredigens QYMF	5311426
YP_001319235.1	CDS	Amet_1376	NC_009633.1	1435896	1436735	D	TIGRFAM: glutamate racemase; PFAM: Asp/Glu racemase; KEGG: cno:NT01CX_0654 glutamate racemase; glutamate racemase	1435896..1436735	Alkaliphilus metalliredigens QYMF	5311427
YP_001319236.1	CDS	Amet_1377	NC_009633.1	1436771	1438450	D	PFAM: GAF domain protein; histidine kinase internal region; 5TM Receptors of the LytS-YhcK type, transmembrane region; KEGG: gme:Gmet_2698 histidine kinase internal region; signal transduction histidine kinase LytS	1436771..1438450	Alkaliphilus metalliredigens QYMF	5311428
YP_001319237.1	CDS	Amet_1378	NC_009633.1	1438523	1439293	D	PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: mta:Moth_1964 transcriptional regulator, LytR/AlgR family; LytTR family two component transcriptional regulator	1438523..1439293	Alkaliphilus metalliredigens QYMF	5311429
YP_001319238.1	CDS	Amet_1379	NC_009633.1	1439473	1439967	D	KEGG: nph:NP1830A hypothetical protein; hypothetical protein	1439473..1439967	Alkaliphilus metalliredigens QYMF	5311430
YP_001319239.1	CDS	Amet_1380	NC_009633.1	1440002	1441609	D	PFAM: carbon starvation protein CstA; KEGG: bcl:ABC1450 carbon starvation-induced protein; carbon starvation protein CstA	1440002..1441609	Alkaliphilus metalliredigens QYMF	5311431
YP_001319240.1	CDS	Amet_1381	NC_009633.1	1441728	1441964	D	KEGG: mta:Moth_2201 hypothetical protein; hypothetical protein	1441728..1441964	Alkaliphilus metalliredigens QYMF	5311432
YP_001319241.1	CDS	Amet_1382	NC_009633.1	1442049	1443395	R	TIGRFAM: dipeptidase, putative; PFAM: peptidase M20; KEGG: ppr:PBPRA2746 hypothetical protein; dipeptidase	complement(1442049..1443395)	Alkaliphilus metalliredigens QYMF	5311433
YP_001319242.1	CDS	Amet_1383	NC_009633.1	1443608	1445161	D	PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: ctc:CTC00197 stage V sporulation protein B; polysaccharide biosynthesis protein	1443608..1445161	Alkaliphilus metalliredigens QYMF	5311434
YP_001319243.1	CDS	Amet_1384	NC_009633.1	1445281	1445790	D	PFAM: FMN-binding domain protein; KEGG: tte:TTE2480 major membrane immunogen precursor; FMN-binding domain-containing protein	1445281..1445790	Alkaliphilus metalliredigens QYMF	5311435
YP_001319244.1	CDS	Amet_1385	NC_009633.1	1445799	1445999	D	hypothetical protein	1445799..1445999	Alkaliphilus metalliredigens QYMF	5311436
YP_001319245.1	CDS	Amet_1386	NC_009633.1	1445990	1446154	D	hypothetical protein	1445990..1446154	Alkaliphilus metalliredigens QYMF	5311437
YP_001319246.1	CDS	Amet_1387	NC_009633.1	1446208	1448340	D	Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase	1446208..1448340	Alkaliphilus metalliredigens QYMF	5311438
YP_001319247.1	CDS	Amet_1388	NC_009633.1	1448356	1449039	D	TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; PFAM: Radical SAM domain protein; KEGG: sat:SYN_03523 pyruvate formate-lyase activating enzyme; anaerobic ribonucleoside-triphosphate reductase activating protein	1448356..1449039	Alkaliphilus metalliredigens QYMF	5311439
YP_001319248.1	CDS	Amet_1389	NC_009633.1	1449213	1449623	R	hypothetical protein	complement(1449213..1449623)	Alkaliphilus metalliredigens QYMF	5311440
YP_001319249.1	CDS	Amet_1390	NC_009633.1	1449795	1450274	R	PFAM: protein of unknown function DUF606; KEGG: bce:BC3451 hypothetical membrane spanning protein; hypothetical protein	complement(1449795..1450274)	Alkaliphilus metalliredigens QYMF	5311441
YP_001319250.1	CDS	Amet_1391	NC_009633.1	1450286	1450708	R	KEGG: btl:BALH_3104 possible membrane-spanning protein; putative membrane-spanning protein	complement(1450286..1450708)	Alkaliphilus metalliredigens QYMF	5311442
YP_001319251.1	CDS	Amet_1392	NC_009633.1	1450826	1451521	D	PFAM: cyclic nucleotide-binding; KEGG: bce:BC3449 catabolite gene activator; cyclic nucleotide-binding protein	1450826..1451521	Alkaliphilus metalliredigens QYMF	5311443
YP_001319252.1	CDS	Amet_1393	NC_009633.1	1452473	1453693	D	KEGG: cph:Cpha266_0062 NADPH-dependent FMN reductase; hypothetical protein	1452473..1453693	Alkaliphilus metalliredigens QYMF	5311444
YP_001319253.1	CDS	Amet_1394	NC_009633.1	1453973	1455931	D	PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; FMN-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ctc:CTC00811 fumarate reductase flavoprotein subunit precursor; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein	1453973..1455931	Alkaliphilus metalliredigens QYMF	5311445
YP_001319254.1	CDS	Amet_1395	NC_009633.1	1455989	1456774	R	PFAM: regulatory protein, MerR; KEGG: dsy:DSY2796 hypothetical protein; MerR family transcriptional regulator	complement(1455989..1456774)	Alkaliphilus metalliredigens QYMF	5311446
YP_001319255.1	CDS	Amet_1396	NC_009633.1	1457235	1457501	D	hypothetical protein	1457235..1457501	Alkaliphilus metalliredigens QYMF	5311447
YP_001319256.1	CDS	Amet_1397	NC_009633.1	1457613	1458065	D	hypothetical protein	1457613..1458065	Alkaliphilus metalliredigens QYMF	5311448
YP_001319257.1	CDS	Amet_1398	NC_009633.1	1458191	1459192	R	PFAM: NMT1/THI5 like; KEGG: ctc:CTC00407 ABC transporter substrate-binding protein; NMT1/THI5 like protein	complement(1458191..1459192)	Alkaliphilus metalliredigens QYMF	5311449
YP_001319258.1	CDS	Amet_1399	NC_009633.1	1459387	1459707	D	hypothetical protein	1459387..1459707	Alkaliphilus metalliredigens QYMF	5311450
YP_001319259.1	CDS	Amet_1400	NC_009633.1	1459807	1460349	D	TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: ctc:CTC00117 phosphatidylglycerophosphate synthase; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	1459807..1460349	Alkaliphilus metalliredigens QYMF	5311451
YP_001319260.1	CDS	Amet_1401	NC_009633.1	1460803	1460970	D	hypothetical protein	1460803..1460970	Alkaliphilus metalliredigens QYMF	5311452
YP_001319261.1	CDS	Amet_1402	NC_009633.1	1460984	1463638	D	TIGRFAM: valyl-tRNA synthetase; KEGG: cth:Cthe_0324 valyl-tRNA synthetase; valyl-tRNA synthetase	1460984..1463638	Alkaliphilus metalliredigens QYMF	5311453
YP_001319262.1	CDS	Amet_1403	NC_009633.1	1463848	1465167	D	TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase, middle domain protein; KEGG: tte:TTE0783 Folylpolyglutamate synthase; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase	1463848..1465167	Alkaliphilus metalliredigens QYMF	5311454
YP_001319263.1	CDS	Amet_1404	NC_009633.1	1465261	1466145	D	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: tte:TTE0105 predicted Co/Zn/Cd cation transporters; cation diffusion facilitator family transporter	1465261..1466145	Alkaliphilus metalliredigens QYMF	5311455
YP_001319264.1	CDS	Amet_1405	NC_009633.1	1466463	1467527	D	PFAM: phage integrase family protein; KEGG: gfo:orf943 phage integrase family protein; phage integrase family protein	1466463..1467527	Alkaliphilus metalliredigens QYMF	5311456
YP_001319265.1	CDS	Amet_1406	NC_009633.1	1467652	1468617	D	KEGG: sav:SAV2216 hypothetical protein; hypothetical protein	1467652..1468617	Alkaliphilus metalliredigens QYMF	5311457
YP_001319266.1	CDS	Amet_1407	NC_009633.1	1468643	1468825	D	hypothetical protein	1468643..1468825	Alkaliphilus metalliredigens QYMF	5311458
YP_001319267.1	CDS	Amet_1408	NC_009633.1	1468844	1469791	D	KEGG: rru:Rru_A0261 hypothetical protein; hypothetical protein	1468844..1469791	Alkaliphilus metalliredigens QYMF	5311459
YP_001319268.1	CDS	Amet_1409	NC_009633.1	1470537	1470971	D	KEGG: mba:Mbar_A1733 reverse transcriptase; hypothetical protein	1470537..1470971	Alkaliphilus metalliredigens QYMF	5311460
YP_001319269.1	CDS	Amet_1410	NC_009633.1	1470980	1473037	R	PFAM: Resolvase, N-terminal domain; KEGG: fra:Francci3_2088 recombinase; resolvase domain-containing protein	complement(1470980..1473037)	Alkaliphilus metalliredigens QYMF	5311461
YP_001319270.1	CDS	Amet_1411	NC_009633.1	1473616	1474731	D	PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; KEGG: mbu:Mbur_2039 RNA-directed DNA polymerase; maturase-specific domain-containing protein	1473616..1474731	Alkaliphilus metalliredigens QYMF	5311462
YP_001319271.1	CDS	Amet_1412	NC_009633.1	1475151	1475789	D	hypothetical protein	1475151..1475789	Alkaliphilus metalliredigens QYMF	5311463
YP_001319272.1	CDS	Amet_1413	NC_009633.1	1476036	1476500	D	PFAM: GCN5-related N-acetyltransferase; KEGG: cac:CAC3374 predicted acetyltransferase; N-acetyltransferase GCN5	1476036..1476500	Alkaliphilus metalliredigens QYMF	5311464
YP_001319273.1	CDS	Amet_1414	NC_009633.1	1476799	1477410	D	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cac:CAC2827 S-adenosylmethionine-dependent methyltransferase; type 12 methyltransferase	1476799..1477410	Alkaliphilus metalliredigens QYMF	5311465
YP_001319274.1	CDS	Amet_1415	NC_009633.1	1477685	1478203	D	KEGG: mmp:MMP0794 hypothetical protein; hypothetical protein	1477685..1478203	Alkaliphilus metalliredigens QYMF	5311466
YP_001319275.1	CDS	Amet_1416	NC_009633.1	1478284	1479021	D	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mhu:Mhun_1280 4Fe-4S ferredoxin, iron-sulfur binding; 4Fe-4S ferredoxin	1478284..1479021	Alkaliphilus metalliredigens QYMF	5311467
YP_001319276.1	CDS	Amet_1417	NC_009633.1	1479231	1480121	D	hypothetical protein	1479231..1480121	Alkaliphilus metalliredigens QYMF	5311468
YP_001319277.1	CDS	Amet_1418	NC_009633.1	1480302	1481129	D	PFAM: beta-lactamase domain protein; KEGG: cpf:CPF_1168 metallo-beta-lactamase family protein; beta-lactamase domain-containing protein	1480302..1481129	Alkaliphilus metalliredigens QYMF	5311469
YP_001319278.1	CDS	Amet_1419	NC_009633.1	1481202	1481675	D	PFAM: GCN5-related N-acetyltransferase; KEGG: ljo:LJ1236 hypothetical protein; N-acetyltransferase GCN5	1481202..1481675	Alkaliphilus metalliredigens QYMF	5311470
YP_001319279.1	CDS	Amet_1420	NC_009633.1	1481804	1482256	D	PFAM: GCN5-related N-acetyltransferase; KEGG: bth:BT_1464 putative acetyltransferase, (GNAT) family; N-acetyltransferase GCN5	1481804..1482256	Alkaliphilus metalliredigens QYMF	5311471
YP_001319280.1	CDS	Amet_1421	NC_009633.1	1482535	1483119	D	PFAM: ThiJ/PfpI domain protein; KEGG: smu:SMU.1682c conserved hypothetical protein; possible intracellular protease; ThiJ/PfpI domain-containing protein	1482535..1483119	Alkaliphilus metalliredigens QYMF	5311472
YP_001319281.1	CDS	Amet_1422	NC_009633.1	1483505	1484401	D	PFAM: pentapeptide repeat protein; KEGG: cac:CAC0073 uncharacterized protein, ortholog of YYBG B.subtilis; pentapeptide repeat-containing protein	1483505..1484401	Alkaliphilus metalliredigens QYMF	5311473
YP_001319282.1	CDS	Amet_1423	NC_009633.1	1484421	1484969	D	PFAM: GCN5-related N-acetyltransferase; KEGG: bld:BLi00525 YdaF; N-acetyltransferase GCN5	1484421..1484969	Alkaliphilus metalliredigens QYMF	5311474
YP_001319283.1	CDS	Amet_1425	NC_009633.1	1485920	1486087	D	hypothetical protein	1485920..1486087	Alkaliphilus metalliredigens QYMF	5311476
YP_001319284.1	CDS	Amet_1426	NC_009633.1	1486173	1486991	D	PFAM: VanW family protein; KEGG: bce:BC2985 vancomycin B-type resistance protein VanW; VanW family protein	1486173..1486991	Alkaliphilus metalliredigens QYMF	5311477
YP_001319285.1	CDS	Amet_1427	NC_009633.1	1487004	1487234	D	hypothetical protein	1487004..1487234	Alkaliphilus metalliredigens QYMF	5311478
YP_001319286.1	CDS	Amet_1428	NC_009633.1	1487265	1488176	D	PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: lac:LBA0355 transcriptional regulator; helix-turn-helix domain-containing protein	1487265..1488176	Alkaliphilus metalliredigens QYMF	5311479
YP_001319287.1	CDS	Amet_1429	NC_009633.1	1488334	1488768	D	hypothetical protein	1488334..1488768	Alkaliphilus metalliredigens QYMF	5311480
YP_001319288.1	CDS	Amet_1430	NC_009633.1	1489248	1490063	D	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mst:Msp_1385 hypothetical protein; 4Fe-4S ferredoxin	1489248..1490063	Alkaliphilus metalliredigens QYMF	5311481
YP_001319289.1	CDS	Amet_1431	NC_009633.1	1490121	1491179	D	PFAM: beta-lactamase; KEGG: btk:BT9727_2440 alkaline D-peptidase (D-stereospecific peptide hydrolase); beta-lactamase	1490121..1491179	Alkaliphilus metalliredigens QYMF	5311482
YP_001319290.1	CDS	Amet_1432	NC_009633.1	1491216	1491650	D	PFAM: protein of unknown function DUF1200; KEGG: oih:OB1702 hypothetical protein; hypothetical protein	1491216..1491650	Alkaliphilus metalliredigens QYMF	5311483
YP_001319291.1	CDS	Amet_1433	NC_009633.1	1491722	1492186	D	PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: ape:APE_2540.1 putative ala-tRNApro hydrolase ProX; YbaK/prolyl-tRNA synthetase associated domain-containing protein	1491722..1492186	Alkaliphilus metalliredigens QYMF	5311484
YP_001319292.1	CDS	Amet_1434	NC_009633.1	1492387	1492947	D	PFAM: protein of unknown function DUF1697; KEGG: mca:MCA2327 hypothetical protein; hypothetical protein	1492387..1492947	Alkaliphilus metalliredigens QYMF	5311485
YP_001319293.1	CDS	Amet_1435	NC_009633.1	1493144	1493533	D	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: vpa:VPA0302 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase	1493144..1493533	Alkaliphilus metalliredigens QYMF	5311486
YP_001319294.1	CDS	Amet_1436	NC_009633.1	1493617	1494129	D	PFAM: GCN5-related N-acetyltransferase; KEGG: dsy:DSY3988 hypothetical protein; N-acetyltransferase GCN5	1493617..1494129	Alkaliphilus metalliredigens QYMF	5311487
YP_001319295.1	CDS	Amet_1437	NC_009633.1	1494190	1494459	D	KEGG: dsy:DSY0347 hypothetical protein; hypothetical protein	1494190..1494459	Alkaliphilus metalliredigens QYMF	5311488
YP_001319296.1	CDS	Amet_1438	NC_009633.1	1494557	1495291	D	KEGG: cth:Cthe_2121 hypothetical protein; hypothetical protein	1494557..1495291	Alkaliphilus metalliredigens QYMF	5311489
YP_001319297.1	CDS	Amet_1439	NC_009633.1	1495429	1496232	D	PFAM: catalytic domain of components of various dehydrogenase complexes; KEGG: bha:BH1847 hypothetical protein; dehydrogenase catalytic domain-containing protein	1495429..1496232	Alkaliphilus metalliredigens QYMF	5311490
YP_001319298.1	CDS	Amet_1440	NC_009633.1	1496296	1496883	D	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mac:MA4347 menaquinone biosynthesis methyltransferase (2-heptaprenyl-1,4-naphthoquinone methyltransferase); type 11 methyltransferase	1496296..1496883	Alkaliphilus metalliredigens QYMF	5311491
YP_001319299.1	CDS	Amet_1441	NC_009633.1	1497005	1498075	D	PFAM: HEAT domain containing protein; KEGG: chu:CHU_1766 conserved hypothetical protein; possible DNA alkylation repair enzyme; heat domain-containing protein	1497005..1498075	Alkaliphilus metalliredigens QYMF	5311492
YP_001319300.1	CDS	Amet_1442	NC_009633.1	1498287	1499006	D	PFAM: phospholipid/glycerol acyltransferase; KEGG: cno:NT01CX_1393 1-acyl-sn-glycerol-3-phosphate acyltransferase, putative; phospholipid/glycerol acyltransferase	1498287..1499006	Alkaliphilus metalliredigens QYMF	5311493
YP_001319301.1	CDS	Amet_1443	NC_009633.1	1499584	1500024	D	KEGG: cac:CA_P0152 hypothetical protein, CF-6 family; hypothetical protein	1499584..1500024	Alkaliphilus metalliredigens QYMF	5311494
YP_001319302.1	CDS	Amet_1444	NC_009633.1	1500135	1500983	D	KEGG: mva:Mvan_1198 conserved hypothetical protein; hypothetical protein	1500135..1500983	Alkaliphilus metalliredigens QYMF	5311495
YP_001319303.1	CDS	Amet_1445	NC_009633.1	1501112	1502878	D	PFAM: Hemerythrin HHE cation binding domain protein; Domain of unknown function DUF1858; KEGG: pgi:PG0686 hypothetical protein; hypothetical protein	1501112..1502878	Alkaliphilus metalliredigens QYMF	5311496
YP_001319304.1	CDS	Amet_1446	NC_009633.1	1503127	1504785	D	catalyzes the reduction of hydroxylamine to ammonia and water; hydroxylamine reductase	1503127..1504785	Alkaliphilus metalliredigens QYMF	5311497
YP_001319305.1	CDS	Amet_1447	NC_009633.1	1505033	1505482	D	PFAM: UspA domain protein; KEGG: mma:MM1452 universal stress protein; UspA domain-containing protein	1505033..1505482	Alkaliphilus metalliredigens QYMF	5311498
YP_001319306.1	CDS	Amet_1448	NC_009633.1	1505710	1508487	D	TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: sfu:Sfum_2209 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase	1505710..1508487	Alkaliphilus metalliredigens QYMF	5311499
YP_001319307.1	CDS	Amet_1449	NC_009633.1	1508758	1510746	D	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: dsy:DSY3380 hypothetical protein; methyl-accepting chemotaxis sensory transducer	1508758..1510746	Alkaliphilus metalliredigens QYMF	5311500
YP_001319308.1	CDS	Amet_1450	NC_009633.1	1510820	1511839	R	PFAM: Pirin domain protein; KEGG: cac:CAC1492 uncharacterized protein, YhhW/pirin family; pirin domain-containing protein	complement(1510820..1511839)	Alkaliphilus metalliredigens QYMF	5311501
YP_001319309.1	CDS	Amet_1451	NC_009633.1	1512430	1514331	D	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bce:BC0239 ABC transporter ATP-binding protein uup; ABC transporter-like protein	1512430..1514331	Alkaliphilus metalliredigens QYMF	5311502
YP_001319310.1	CDS	Amet_1452	NC_009633.1	1514714	1515292	D	PFAM: GCN5-related N-acetyltransferase; KEGG: bat:BAS2522 acetyltransferase, GNAT family; N-acetyltransferase GCN5	1514714..1515292	Alkaliphilus metalliredigens QYMF	5311503
YP_001319311.1	CDS	Amet_1453	NC_009633.1	1515361	1515957	D	PFAM: ThiJ/PfpI domain protein; KEGG: bca:BCE_2883 hypothetical protein; ThiJ/PfpI domain-containing protein	1515361..1515957	Alkaliphilus metalliredigens QYMF	5311504
YP_001319312.1	CDS	Amet_1454	NC_009633.1	1516142	1516456	D	hypothetical protein	1516142..1516456	Alkaliphilus metalliredigens QYMF	5311505
YP_001319313.1	CDS	Amet_1455	NC_009633.1	1516438	1516950	D	PFAM: GCN5-related N-acetyltransferase; KEGG: cac:CAC2509 predicted acetyltransferase; N-acetyltransferase GCN5	1516438..1516950	Alkaliphilus metalliredigens QYMF	5311506
YP_001319314.1	CDS	Amet_1456	NC_009633.1	1517113	1517490	D	hypothetical protein	1517113..1517490	Alkaliphilus metalliredigens QYMF	5311507
YP_001319315.1	CDS	Amet_1457	NC_009633.1	1517699	1518373	D	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cac:CAC0224 response regulator (CheY-like receiver domain and HTH DNA-binding domain); two component transcriptional regulator	1517699..1518373	Alkaliphilus metalliredigens QYMF	5311508
YP_001319316.1	CDS	Amet_1458	NC_009633.1	1518370	1519398	D	PFAM: ATP-binding region, ATPase domain protein; KEGG: cac:CAC0225 sensory transduction histidine kinase; integral membrane sensor signal transduction histidine kinase	1518370..1519398	Alkaliphilus metalliredigens QYMF	5311509
YP_001319317.1	CDS	Amet_1459	NC_009633.1	1519491	1520249	D	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cac:CAC0226 ABC transporter, ATP-binding protein; ABC transporter-like protein	1519491..1520249	Alkaliphilus metalliredigens QYMF	5311510
YP_001319318.1	CDS	Amet_1460	NC_009633.1	1520246	1522228	D	PFAM: protein of unknown function DUF214; KEGG: btl:BALH_4398 ABC transporter, permease component; hypothetical protein	1520246..1522228	Alkaliphilus metalliredigens QYMF	5311511
YP_001319319.1	CDS	Amet_1461	NC_009633.1	1522421	1522822	R	KEGG: swo:Swol_2182 alkyl hydroperoxide reductase; alkyl hydroperoxide reductase	complement(1522421..1522822)	Alkaliphilus metalliredigens QYMF	5311512
YP_001319320.1	CDS	Amet_1462	NC_009633.1	1522892	1523140	R	KEGG: swo:Swol_2181 peroxiredoxin-like protein; peroxiredoxin-like protein	complement(1522892..1523140)	Alkaliphilus metalliredigens QYMF	5311513
YP_001319321.1	CDS	Amet_1463	NC_009633.1	1523381	1523731	D	PFAM: protein of unknown function DUF134; KEGG: dsy:DSY3441 hypothetical protein; hypothetical protein	1523381..1523731	Alkaliphilus metalliredigens QYMF	5311514
YP_001319322.1	CDS	Amet_1464	NC_009633.1	1523784	1524152	D	PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: tte:TTE1893 hypothetical protein; dinitrogenase iron-molybdenum cofactor biosynthesis protein	1523784..1524152	Alkaliphilus metalliredigens QYMF	5311515
YP_001319323.1	CDS	Amet_1465	NC_009633.1	1524139	1525011	D	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Cobyrinic acid a,c-diamide synthase; KEGG: dsy:DSY3440 hypothetical protein; cobyrinic acid a,c-diamide synthase	1524139..1525011	Alkaliphilus metalliredigens QYMF	5311516
YP_001319324.1	CDS	Amet_1466	NC_009633.1	1524989	1525849	D	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Cobyrinic acid a,c-diamide synthase; KEGG: dsy:DSY3439 hypothetical protein; cobyrinic acid a,c-diamide synthase	1524989..1525849	Alkaliphilus metalliredigens QYMF	5311517
YP_001319325.1	CDS	Amet_1467	NC_009633.1	1525884	1526240	D	PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: dsy:DSY3437 hypothetical protein; dinitrogenase iron-molybdenum cofactor biosynthesis protein	1525884..1526240	Alkaliphilus metalliredigens QYMF	5311518
YP_001319326.1	CDS	Amet_1468	NC_009633.1	1526249	1526719	D	KEGG: mka:MK0529 HAD family hydrolase, a fragment; HAD family hydrolase	1526249..1526719	Alkaliphilus metalliredigens QYMF	5311519
YP_001319327.1	CDS	Amet_1469	NC_009633.1	1527194	1527943	D	PFAM: Silent information regulator protein Sir2; KEGG: oih:OB3159 transcriptional regulator; silent information regulator protein Sir2	1527194..1527943	Alkaliphilus metalliredigens QYMF	5311520
YP_001319328.1	CDS	Amet_1471	NC_009633.1	1530189	1531742	D	PFAM: Integrase, catalytic region; KEGG: bha:BH3965 transposase (22); integrase catalytic subunit	1530189..1531742	Alkaliphilus metalliredigens QYMF	5311522
YP_001319329.1	CDS	Amet_1472	NC_009633.1	1531730	1532473	D	PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: dsy:DSY0836 hypothetical protein; IstB ATP binding domain-containing protein	1531730..1532473	Alkaliphilus metalliredigens QYMF	5311523
YP_001319330.1	CDS	Amet_1473	NC_009633.1	1532477	1532686	D	hypothetical protein	1532477..1532686	Alkaliphilus metalliredigens QYMF	5311524
YP_001319331.1	CDS	Amet_1474	NC_009633.1	1533389	1533970	R	PFAM: ThiJ/PfpI domain protein; KEGG: bca:BCE_2883 hypothetical protein; ThiJ/PfpI domain-containing protein	complement(1533389..1533970)	Alkaliphilus metalliredigens QYMF	5311525
YP_001319332.1	CDS	Amet_1476	NC_009633.1	1535795	1536091	D	hypothetical protein	1535795..1536091	Alkaliphilus metalliredigens QYMF	5311527
YP_001319333.1	CDS	Amet_1477	NC_009633.1	1536161	1537111	R	hypothetical protein	complement(1536161..1537111)	Alkaliphilus metalliredigens QYMF	5311528
YP_001319334.1	CDS	Amet_1479	NC_009633.1	1539267	1539755	D	PFAM: regulatory protein, MarR; transcriptional regulator TrmB; KEGG: bat:BAS0304 transcriptional regulator, MarR family; transcriptional regulator TrmB	1539267..1539755	Alkaliphilus metalliredigens QYMF	5311530
YP_001319335.1	CDS	Amet_1480	NC_009633.1	1539853	1541028	D	TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase; KEGG: bcz:BCZK0288 arsenite-transporting ATPase; arsenite-activated ATPase ArsA	1539853..1541028	Alkaliphilus metalliredigens QYMF	5311531
YP_001319336.1	CDS	Amet_1481	NC_009633.1	1541021	1541875	D	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mva:Mvan_0776 ABC transporter-related protein; ABC transporter-like protein	1541021..1541875	Alkaliphilus metalliredigens QYMF	5311532
YP_001319337.1	CDS	Amet_1482	NC_009633.1	1541872	1542564	D	PFAM: ABC-2 type transporter; KEGG: dsy:DSY0913 hypothetical protein; ABC transporter	1541872..1542564	Alkaliphilus metalliredigens QYMF	5311533
YP_001319338.1	CDS	Amet_1483	NC_009633.1	1542568	1543284	D	KEGG: dsy:DSY0914 hypothetical protein; hypothetical protein	1542568..1543284	Alkaliphilus metalliredigens QYMF	5311534
YP_001319339.1	CDS	Amet_1484	NC_009633.1	1543383	1544201	R	PFAM: amidinotransferase; KEGG: cpe:CPE0344 hypothetical protein; amidinotransferase	complement(1543383..1544201)	Alkaliphilus metalliredigens QYMF	5311535
YP_001319340.1	CDS	Amet_1485	NC_009633.1	1544537	1544929	R	hypothetical protein	complement(1544537..1544929)	Alkaliphilus metalliredigens QYMF	5311536
YP_001319341.1	CDS	Amet_1486	NC_009633.1	1544922	1546181	R	PFAM: cell wall hydrolase/autolysin; KEGG: mta:Moth_1790 copper amine oxidase-like; cell wall hydrolase/autolysin	complement(1544922..1546181)	Alkaliphilus metalliredigens QYMF	5311537
YP_001319342.1	CDS	Amet_1487	NC_009633.1	1546178	1546630	R	hypothetical protein	complement(1546178..1546630)	Alkaliphilus metalliredigens QYMF	5311538
YP_001319343.1	CDS	Amet_1488	NC_009633.1	1546792	1547298	R	hypothetical protein	complement(1546792..1547298)	Alkaliphilus metalliredigens QYMF	5311539
YP_001319344.1	CDS	Amet_1489	NC_009633.1	1547507	1548634	D	PFAM: copper amine oxidase domain protein; KEGG: cth:Cthe_0779 copper amine oxidase-like protein; copper amine oxidase domain-containing protein	1547507..1548634	Alkaliphilus metalliredigens QYMF	5311540
YP_001319345.1	CDS	Amet_1490	NC_009633.1	1548805	1549284	R	hypothetical protein	complement(1548805..1549284)	Alkaliphilus metalliredigens QYMF	5311541
YP_001319346.1	CDS	Amet_1491	NC_009633.1	1549583	1550818	D	PFAM: protein of unknown function DUF405; protein of unknown function DUF418; KEGG: bha:BH3693 hypothetical protein; hypothetical protein	1549583..1550818	Alkaliphilus metalliredigens QYMF	5311542
YP_001319347.1	CDS	Amet_1492	NC_009633.1	1551116	1553455	D	KEGG: tte:TTE0861 hypothetical protein; hypothetical protein	1551116..1553455	Alkaliphilus metalliredigens QYMF	5311543
YP_001319348.1	CDS	Amet_1495	NC_009633.1	1554284	1554475	D	hypothetical protein	1554284..1554475	Alkaliphilus metalliredigens QYMF	5311546
YP_001319349.1	CDS	Amet_1496	NC_009633.1	1554645	1555280	D	PFAM: NADPH-dependent FMN reductase; KEGG: gsu:GSU0179 NADPH-dependent FMN reductase domain protein; NADPH-dependent FMN reductase	1554645..1555280	Alkaliphilus metalliredigens QYMF	5311547
YP_001319350.1	CDS	Amet_1497	NC_009633.1	1555576	1556043	R	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: pfu:PF0752 thioredoxin peroxidase; alkyl hydroperoxide reductase	complement(1555576..1556043)	Alkaliphilus metalliredigens QYMF	5311548
YP_001319351.1	CDS	Amet_1498	NC_009633.1	1556344	1557951	D	PFAM: copper amine oxidase domain protein; KEGG: cth:Cthe_0779 copper amine oxidase-like protein; copper amine oxidase domain-containing protein	1556344..1557951	Alkaliphilus metalliredigens QYMF	5311549
YP_001319352.1	CDS	Amet_1499	NC_009633.1	1558431	1559972	D	PFAM: transposase, IS4 family protein; KEGG: swo:Swol_2451 hypothetical protein; transposase, IS4 family protein	1558431..1559972	Alkaliphilus metalliredigens QYMF	5311550
YP_001319353.1	CDS	Amet_1500	NC_009633.1	1560384	1561982	R	KEGG: nca:Noca_2212 putative ABC antibiotics transporter; putative ABC antibiotics transporter	complement(1560384..1561982)	Alkaliphilus metalliredigens QYMF	5311551
YP_001319354.1	CDS	Amet_1501	NC_009633.1	1561982	1562902	R	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rha:RHA1_ro06063 probable ABC transporter, ATP-binding component; ABC transporter-like protein	complement(1561982..1562902)	Alkaliphilus metalliredigens QYMF	5311552
YP_001319355.1	CDS	Amet_1502	NC_009633.1	1563023	1563658	R	PFAM: regulatory protein, TetR; KEGG: dsy:DSY3670 hypothetical protein; TetR family transcriptional regulator	complement(1563023..1563658)	Alkaliphilus metalliredigens QYMF	5311553
YP_001319356.1	CDS	Amet_1503	NC_009633.1	1563917	1564738	D	KEGG: bcl:ABC1535 hypothetical protein; hypothetical protein	1563917..1564738	Alkaliphilus metalliredigens QYMF	5311554
YP_001319357.1	CDS	Amet_1504	NC_009633.1	1564818	1565699	D	PFAM: helix-turn-helix- domain containing protein, AraC type; transcription activator, effector binding; KEGG: bat:BAS4724 transcriptional regulator, AraC family; transcription activator, effector binding	1564818..1565699	Alkaliphilus metalliredigens QYMF	5311555
YP_001319358.1	CDS	Amet_1505	NC_009633.1	1565856	1566323	D	PFAM: ubiquitin-associated- domain-containing protein; KEGG: cac:CAC1297 N-terminal fragment of elongation factor Ts; ubiquitin-associated protein	1565856..1566323	Alkaliphilus metalliredigens QYMF	5311556
YP_001319359.1	CDS	Amet_1506	NC_009633.1	1566498	1567181	D	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: dsy:DSY1143 hypothetical protein; two component transcriptional regulator	1566498..1567181	Alkaliphilus metalliredigens QYMF	5311557
YP_001319360.1	CDS	Amet_1507	NC_009633.1	1567174	1568748	D	PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; KEGG: tte:TTE1017 sensory transduction histidine kinase; integral membrane sensor signal transduction histidine kinase	1567174..1568748	Alkaliphilus metalliredigens QYMF	5311558
YP_001319361.1	CDS	Amet_1508	NC_009633.1	1568829	1569008	D	hypothetical protein	1568829..1569008	Alkaliphilus metalliredigens QYMF	5311559
YP_001319362.1	CDS	Amet_1509	NC_009633.1	1569166	1569690	D	PFAM: formylmethanofuran dehydrogenase, subunit E region; KEGG: dsy:DSY0393 formylmethanofuran dehydrogenase subunit E; formylmethanofuran dehydrogenase subunit E	1569166..1569690	Alkaliphilus metalliredigens QYMF	5311560
YP_001319363.1	CDS	Amet_1510	NC_009633.1	1569972	1570622	D	modulates transcription in response to the NADH/NAD(+) redox state; redox-sensing transcriptional repressor Rex	1569972..1570622	Alkaliphilus metalliredigens QYMF	5311561
YP_001319364.1	CDS	Amet_1511	NC_009633.1	1571071	1571901	D	PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; KEGG: fnu:FN0197 methyltransferase; cyclopropane-fatty-acyl-phospholipid synthase	1571071..1571901	Alkaliphilus metalliredigens QYMF	5311562
YP_001319365.1	CDS	Amet_1512	NC_009633.1	1571970	1573541	D	PFAM: extracellular solute-binding protein, family 5; KEGG: mma:MM2460 dipeptide/oligopeptide-binding protein; extracellular solute-binding protein	1571970..1573541	Alkaliphilus metalliredigens QYMF	5311563
YP_001319366.1	CDS	Amet_1513	NC_009633.1	1573551	1574570	D	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dsy:DSY3210 hypothetical protein; binding-protein-dependent transport system inner membrane protein	1573551..1574570	Alkaliphilus metalliredigens QYMF	5311564
YP_001319367.1	CDS	Amet_1514	NC_009633.1	1574628	1575398	D	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dsy:DSY3209 hypothetical protein; binding-protein-dependent transport system inner membrane protein	1574628..1575398	Alkaliphilus metalliredigens QYMF	5311565
YP_001319368.1	CDS	Amet_1515	NC_009633.1	1575429	1577138	D	TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; KEGG: dsy:DSY3208 hypothetical protein; oligopeptide/dipeptide ABC transporter ATPase	1575429..1577138	Alkaliphilus metalliredigens QYMF	5311566
YP_001319369.1	CDS	Amet_1516	NC_009633.1	1577905	1578339	D	PFAM: GCN5-related N-acetyltransferase; KEGG: cpf:CPF_0724 acetyltransferase, GNAT family; N-acetyltransferase GCN5	1577905..1578339	Alkaliphilus metalliredigens QYMF	5311567
YP_001319370.1	CDS	Amet_1518	NC_009633.1	1579642	1580316	D	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: btl:BALH_1732 DNA-binding response regulator; two component transcriptional regulator	1579642..1580316	Alkaliphilus metalliredigens QYMF	5311569
YP_001319371.1	CDS	Amet_1519	NC_009633.1	1580313	1581869	D	PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; KEGG: gka:GK0907 two-component sensor histidine kinase; integral membrane sensor signal transduction histidine kinase	1580313..1581869	Alkaliphilus metalliredigens QYMF	5311570
YP_001319372.1	CDS	Amet_1520	NC_009633.1	1582019	1583299	D	KEGG: oih:OB0251 hypothetical protein; hypothetical protein	1582019..1583299	Alkaliphilus metalliredigens QYMF	5311571
YP_001319373.1	CDS	Amet_1521	NC_009633.1	1583720	1584940	D	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: dsy:DSY3360 hypothetical protein; RND family efflux transporter MFP subunit	1583720..1584940	Alkaliphilus metalliredigens QYMF	5311572
YP_001319374.1	CDS	Amet_1522	NC_009633.1	1584937	1588062	D	PFAM: acriflavin resistance protein; KEGG: dsy:DSY3359 hypothetical protein; acriflavin resistance protein	1584937..1588062	Alkaliphilus metalliredigens QYMF	5311573
YP_001319375.1	CDS	Amet_1524	NC_009633.1	1588902	1590139	D	PFAM: transposase, IS111A/IS1328/IS1533; KEGG: gka:GK3301 transposase; transposase, IS111A/IS1328/IS1533	join(1588902..1589831,1589831..1590139)	Alkaliphilus metalliredigens QYMF	5311575
YP_001319376.1	CDS	Amet_1525	NC_009633.1	1590312	1592933	D	PFAM: pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising protein, mobile region; KEGG: cac:CAC0534 phosphoenolpyruvate synthase (gene pps); phosphoenolpyruvate synthase	1590312..1592933	Alkaliphilus metalliredigens QYMF	5311576
YP_001319377.1	CDS	Amet_1526	NC_009633.1	1593211	1593822	D	KEGG: tko:TK1044 predicted permease, major facilitator superfamily; major facilitator superfamily permease	1593211..1593822	Alkaliphilus metalliredigens QYMF	5311577
YP_001319378.1	CDS	Amet_1527	NC_009633.1	1594044	1595378	D	hypothetical protein	1594044..1595378	Alkaliphilus metalliredigens QYMF	5311578
YP_001319379.1	CDS	Amet_1528	NC_009633.1	1595501	1596706	R	PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; KEGG: gka:GK2252 transposase; transposase, IS204/IS1001/IS1096/IS1165 family protein	complement(1595501..1596706)	Alkaliphilus metalliredigens QYMF	5311579
YP_001319380.1	CDS	Amet_1529	NC_009633.1	1597032	1597394	D	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sat:SYN_00718 lactoylglutathione lyase; glyoxalase/bleomycin resistance protein/dioxygenase	1597032..1597394	Alkaliphilus metalliredigens QYMF	5311580
YP_001319381.1	CDS	Amet_1530	NC_009633.1	1597477	1599024	R	KEGG: swo:Swol_1096 hypothetical protein; hypothetical protein	complement(1597477..1599024)	Alkaliphilus metalliredigens QYMF	5311581
YP_001319382.1	CDS	Amet_1533	NC_009633.1	1600593	1601927	R	KEGG: cth:Cthe_3229 transposase, IS4; hypothetical protein	complement(1600593..1601927)	Alkaliphilus metalliredigens QYMF	5311584
YP_001319383.1	CDS	Amet_1534	NC_009633.1	1602510	1609385	D	TIGRFAM: cell wall/surface repeat protein; PFAM: S-layer domain protein; Cadherin; KEGG: ter:Tery_3470 hemolysin-type calcium-binding region; cell wall/surface repeat-containing protein	1602510..1609385	Alkaliphilus metalliredigens QYMF	5311585
YP_001319384.1	CDS	Amet_1535	NC_009633.1	1610157	1611506	D	KEGG: fra:Francci3_4013 transposase, IS4; hypothetical protein	1610157..1611506	Alkaliphilus metalliredigens QYMF	5311586
YP_001319385.1	CDS	Amet_1536	NC_009633.1	1611704	1612168	D	KEGG: sth:STH1112 ABC transporter ATP-binding protein; ABC transporter ATP-binding protein	1611704..1612168	Alkaliphilus metalliredigens QYMF	5311587
YP_001319386.1	CDS	Amet_1537	NC_009633.1	1612266	1613600	D	KEGG: cth:Cthe_3229 transposase, IS4; hypothetical protein	1612266..1613600	Alkaliphilus metalliredigens QYMF	5311588
YP_001319387.1	CDS	Amet_1540	NC_009633.1	1614199	1614663	R	PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: fnu:FN0673 EbsC protein; YbaK/prolyl-tRNA synthetase associated domain-containing protein	complement(1614199..1614663)	Alkaliphilus metalliredigens QYMF	5311591
YP_001319388.1	CDS	Amet_1542	NC_009633.1	1615302	1615793	R	hypothetical protein	complement(1615302..1615793)	Alkaliphilus metalliredigens QYMF	5311593
YP_001319389.1	CDS	Amet_1544	NC_009633.1	1616682	1618589	D	PFAM: Abortive infection protein; KEGG: bam:Bamb_3325 hypothetical protein; abortive infection protein	1616682..1618589	Alkaliphilus metalliredigens QYMF	5311595
YP_001319390.1	CDS	Amet_1545	NC_009633.1	1618880	1619683	D	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pgi:PG1175 ABC transporter, ATP-binding protein, putative; ABC transporter-like protein	1618880..1619683	Alkaliphilus metalliredigens QYMF	5311596
YP_001319391.1	CDS	Amet_1546	NC_009633.1	1619800	1619985	R	hypothetical protein	complement(1619800..1619985)	Alkaliphilus metalliredigens QYMF	5311597
YP_001319392.1	CDS	Amet_1547	NC_009633.1	1620053	1621450	R	PFAM: regulatory protein GntR, HTH; aminotransferase, class I and II; KEGG: btl:BALH_2995 transcriptional regulator, GntR family; GntR family transcriptional regulator	complement(1620053..1621450)	Alkaliphilus metalliredigens QYMF	5311598
YP_001319393.1	CDS	Amet_1548	NC_009633.1	1621606	1622016	D	KEGG: vfi:VF1078 hypothetical protein; hypothetical protein	1621606..1622016	Alkaliphilus metalliredigens QYMF	5311599
YP_001319394.1	CDS	Amet_1551	NC_009633.1	1622833	1624794	R	TIGRFAM: flavocytochrome c; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; FMN-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ser:SERP2381 NADH:flavin oxidoreductase/fumarate reductase, flavoprotein subunit, putative; flavocytochrome c	complement(1622833..1624794)	Alkaliphilus metalliredigens QYMF	5311602
YP_001319395.1	CDS	Amet_1552	NC_009633.1	1624921	1625751	R	PFAM: regulatory protein, MerR; KEGG: dsy:DSY2796 hypothetical protein; MerR family transcriptional regulator	complement(1624921..1625751)	Alkaliphilus metalliredigens QYMF	5311603
YP_001319396.1	CDS	Amet_1553	NC_009633.1	1626114	1627853	R	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tte:TTE0540 ATPase components of ABC transporters with duplicated ATPase domains; ABC transporter-like protein	complement(1626114..1627853)	Alkaliphilus metalliredigens QYMF	5311604
YP_001319397.1	CDS	Amet_1554	NC_009633.1	1628247	1629458	R	PFAM: protein of unknown function DUF214; KEGG: ctc:CTC00486 ABC transporter permease protein; hypothetical protein	complement(1628247..1629458)	Alkaliphilus metalliredigens QYMF	5311605
YP_001319398.1	CDS	Amet_1555	NC_009633.1	1629458	1630150	R	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dsy:DSY3656 hypothetical protein; ABC transporter-like protein	complement(1629458..1630150)	Alkaliphilus metalliredigens QYMF	5311606
YP_001319399.1	CDS	Amet_1556	NC_009633.1	1630143	1631471	R	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: cth:Cthe_1762 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit	complement(1630143..1631471)	Alkaliphilus metalliredigens QYMF	5311607
YP_001319400.1	CDS	Amet_1557	NC_009633.1	1631780	1632475	D	KEGG: bha:BH0784 two-component sensor histidine kinase; two-component sensor histidine kinase	1631780..1632475	Alkaliphilus metalliredigens QYMF	5311608
YP_001319401.1	CDS	Amet_1558	NC_009633.1	1632491	1632964	D	PFAM: ATP-binding region, ATPase domain protein; KEGG: bha:BH0784 two-component sensor histidine kinase; putative signal transduction histidine kinase	1632491..1632964	Alkaliphilus metalliredigens QYMF	5311609
YP_001319402.1	CDS	Amet_1559	NC_009633.1	1632951	1633613	D	PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: bha:BH2123 two-component response regulator; two component LuxR family transcriptional regulator	1632951..1633613	Alkaliphilus metalliredigens QYMF	5311610
YP_001319403.1	CDS	Amet_1560	NC_009633.1	1633743	1634984	D	PFAM: protein of unknown function DUF405; protein of unknown function DUF418; KEGG: bha:BH3693 hypothetical protein; hypothetical protein	1633743..1634984	Alkaliphilus metalliredigens QYMF	5311611
YP_001319404.1	CDS	Amet_1561	NC_009633.1	1635130	1636263	D	PFAM: beta-lactamase; KEGG: btl:BALH_2998 alkaline D-peptidase and alkaline D-peptidase fusion; beta-lactamase	1635130..1636263	Alkaliphilus metalliredigens QYMF	5311612
YP_001319405.1	CDS	Amet_1562	NC_009633.1	1636487	1637842	D	PFAM: nucleoside recognition domain protein; KEGG: oih:OB3031 hypothetical protein; nucleoside recognition domain-containing protein	1636487..1637842	Alkaliphilus metalliredigens QYMF	5311613
YP_001319406.1	CDS	Amet_1565	NC_009633.1	1639236	1639574	D	PFAM: transcriptional regulator PadR family protein; KEGG: dsy:DSY2245 hypothetical protein; PadR-like family transcriptional regulator	1639236..1639574	Alkaliphilus metalliredigens QYMF	5311616
YP_001319407.1	CDS	Amet_1566	NC_009633.1	1639558	1640931	D	PFAM: cell cycle protein; KEGG: lin:lin0441 hypothetical protein; cell cycle protein	1639558..1640931	Alkaliphilus metalliredigens QYMF	5311617
YP_001319408.1	CDS	Amet_1569	NC_009633.1	1642262	1642984	D	hypothetical protein	1642262..1642984	Alkaliphilus metalliredigens QYMF	5311620
YP_001319409.1	CDS	Amet_1570	NC_009633.1	1643119	1645311	D	TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase; KEGG: dsy:DSY1012 hypothetical protein; catalase/peroxidase HPI	1643119..1645311	Alkaliphilus metalliredigens QYMF	5311621
YP_001319410.1	CDS	Amet_1571	NC_009633.1	1645567	1645845	D	hypothetical protein	1645567..1645845	Alkaliphilus metalliredigens QYMF	5311622
YP_001319411.1	CDS	Amet_1573	NC_009633.1	1646648	1647793	D	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: wsu:WS0964 hypothetical protein; diguanylate cyclase	1646648..1647793	Alkaliphilus metalliredigens QYMF	5311624
YP_001319412.1	CDS	Amet_1574	NC_009633.1	1648225	1648905	D	PFAM: helix-turn-helix domain protein; KEGG: mgm:Mmc1_2222 PAS/PAC sensor hybrid histidine kinase; XRE family transcriptional regulator	1648225..1648905	Alkaliphilus metalliredigens QYMF	5311625
YP_001319413.1	CDS	Amet_1575	NC_009633.1	1649226	1651214	D	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: dsy:DSY3380 hypothetical protein; methyl-accepting chemotaxis sensory transducer	1649226..1651214	Alkaliphilus metalliredigens QYMF	5311626
YP_001319414.1	CDS	Amet_1576	NC_009633.1	1651350	1652348	R	KEGG: vfi:VFA0631 hypothetical protein; hypothetical protein	complement(1651350..1652348)	Alkaliphilus metalliredigens QYMF	5311627
YP_001319415.1	CDS	Amet_1577	NC_009633.1	1652586	1653290	D	hypothetical protein	1652586..1653290	Alkaliphilus metalliredigens QYMF	5311628
YP_001319416.1	CDS	Amet_1578	NC_009633.1	1653492	1654226	D	PFAM: protein of unknown function DUF81; KEGG: ilo:IL0754 predicted permease; hypothetical protein	1653492..1654226	Alkaliphilus metalliredigens QYMF	5311629
YP_001319417.1	CDS	Amet_1579	NC_009633.1	1654468	1655406	D	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bcz:pE33L466_0363 possible ABC transporter, periplasmic protein; glyoxalase/bleomycin resistance protein/dioxygenase	1654468..1655406	Alkaliphilus metalliredigens QYMF	5311630
YP_001319418.1	CDS	Amet_1580	NC_009633.1	1655474	1656085	D	KEGG: bca:BCE_5447 hypothetical protein; hypothetical protein	1655474..1656085	Alkaliphilus metalliredigens QYMF	5311631
YP_001319419.1	CDS	Amet_1581	NC_009633.1	1656169	1656849	D	PFAM: helix-turn-helix domain protein; KEGG: cac:CAC3247 predicted transcriptional regulator, LacI/xre family; helix-turn-helix domain-containing protein	1656169..1656849	Alkaliphilus metalliredigens QYMF	5311632
YP_001319420.1	CDS	Amet_1582	NC_009633.1	1657085	1658434	R	KEGG: fra:Francci3_4013 transposase, IS4; hypothetical protein	complement(1657085..1658434)	Alkaliphilus metalliredigens QYMF	5311633
YP_001319421.1	CDS	Amet_1583	NC_009633.1	1658538	1659122	R	PFAM: pentapeptide repeat protein; KEGG: dps:DP2447 similar to McbG protein; pentapeptide repeat-containing protein	complement(1658538..1659122)	Alkaliphilus metalliredigens QYMF	5311634
YP_001319422.1	CDS	Amet_1584	NC_009633.1	1659418	1660056	D	PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: tfu:Tfu_2950 regulatory protein, LuxR:response regulator receiver; two component LuxR family transcriptional regulator	1659418..1660056	Alkaliphilus metalliredigens QYMF	5311635
YP_001319423.1	CDS	Amet_1585	NC_009633.1	1660326	1661390	D	hypothetical protein	1660326..1661390	Alkaliphilus metalliredigens QYMF	5311636
YP_001319424.1	CDS	Amet_1586	NC_009633.1	1661545	1662330	R	PFAM: conserved hypothetical protein 245; KEGG: bca:BCE_5079 membrane protein, putative; hypothetical protein	complement(1661545..1662330)	Alkaliphilus metalliredigens QYMF	5311637
YP_001319425.1	CDS	Amet_1587	NC_009633.1	1662334	1662969	R	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tma:TM0194 putative ABC transport system ATP-binding protein; ABC transporter-like protein	complement(1662334..1662969)	Alkaliphilus metalliredigens QYMF	5311638
YP_001319426.1	CDS	Amet_1588	NC_009633.1	1662985	1663293	R	PFAM: transcriptional regulator PadR family protein; KEGG: bha:BH0575 hypothetical protein; PadR-like family transcriptional regulator	complement(1662985..1663293)	Alkaliphilus metalliredigens QYMF	5311639
YP_001319427.1	CDS	Amet_1589	NC_009633.1	1663472	1664671	D	TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: chu:CHU_3423 chromate transporter, permease component; chromate transporter	1663472..1664671	Alkaliphilus metalliredigens QYMF	5311640
YP_001319428.1	CDS	Amet_1590	NC_009633.1	1664904	1665854	D	TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: tte:TTE0793 hypothetical protein; hypothetical protein	1664904..1665854	Alkaliphilus metalliredigens QYMF	5311641
YP_001319429.1	CDS	Amet_1591	NC_009633.1	1665835	1666362	R	KEGG: cac:CAC2385 hypothetical protein; hypothetical protein	complement(1665835..1666362)	Alkaliphilus metalliredigens QYMF	5311642
YP_001319430.1	CDS	Amet_1592	NC_009633.1	1666492	1666698	R	PFAM: small acid-soluble spore protein, alpha/beta type; KEGG: sth:STH1430 small acid-soluble spore protein; alpha/beta type small acid-soluble spore protein	complement(1666492..1666698)	Alkaliphilus metalliredigens QYMF	5311643
YP_001319431.1	CDS	Amet_1593	NC_009633.1	1667075	1668175	D	PFAM: phage integrase family protein; KEGG: ser:SERP2506 transposase A; phage integrase family protein	1667075..1668175	Alkaliphilus metalliredigens QYMF	5311644
YP_001319432.1	CDS	Amet_1594	NC_009633.1	1668188	1669645	D	PFAM: phage integrase family protein; KEGG: ser:SERP2507 transposase B; phage integrase family protein	1668188..1669645	Alkaliphilus metalliredigens QYMF	5311645
YP_001319433.1	CDS	Amet_1595	NC_009633.1	1669647	1671212	D	PFAM: phage integrase family protein; KEGG: sep:SE1612 transposition regulatory protein TnpB; phage integrase family protein	1669647..1671212	Alkaliphilus metalliredigens QYMF	5311646
YP_001319434.1	CDS	Amet_1596	NC_009633.1	1671199	1671663	D	KEGG: sar:SAR0725 Tn554 transposase C; hypothetical protein	1671199..1671663	Alkaliphilus metalliredigens QYMF	5311647
YP_001319435.1	CDS	Amet_1597	NC_009633.1	1671808	1672053	R	PFAM: helix-turn-helix domain protein; KEGG: cyb:CYB_0663 hypothetical protein; helix-turn-helix domain-containing protein	complement(1671808..1672053)	Alkaliphilus metalliredigens QYMF	5311648
YP_001319436.1	CDS	Amet_1598	NC_009633.1	1672174	1673805	D	KEGG: cch:Cag_0911 hypothetical protein; hypothetical protein	1672174..1673805	Alkaliphilus metalliredigens QYMF	5311649
YP_001319437.1	CDS	Amet_1601	NC_009633.1	1674607	1675683	R	PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; KEGG: mbu:Mbur_2039 RNA-directed DNA polymerase; maturase-specific domain-containing protein	complement(1674607..1675683)	Alkaliphilus metalliredigens QYMF	5311652
YP_001319438.1	CDS	Amet_1602	NC_009633.1	1676262	1678319	D	PFAM: Resolvase, N-terminal domain; KEGG: fra:Francci3_2088 recombinase; resolvase domain-containing protein	1676262..1678319	Alkaliphilus metalliredigens QYMF	5311653
YP_001319439.1	CDS	Amet_1603	NC_009633.1	1678328	1678777	R	KEGG: mac:MA4228 reverse transcriptase; reverse transcriptase	complement(1678328..1678777)	Alkaliphilus metalliredigens QYMF	5311654
YP_001319440.1	CDS	Amet_1604	NC_009633.1	1679303	1679857	R	KEGG: cth:Cthe_2773 integrase, catalytic region; integrase, catalytic region	complement(1679303..1679857)	Alkaliphilus metalliredigens QYMF	5311655
YP_001319441.1	CDS	Amet_1605	NC_009633.1	1679878	1680150	R	KEGG: cth:Cthe_0590 transposase IS3/IS911; transposase IS3/IS911	complement(1679878..1680150)	Alkaliphilus metalliredigens QYMF	5311656
YP_001319442.1	CDS	Amet_1606	NC_009633.1	1680408	1680632	D	hypothetical protein	1680408..1680632	Alkaliphilus metalliredigens QYMF	5311657
YP_001319443.1	CDS	Amet_1607	NC_009633.1	1680696	1683272	D	TIGRFAM: type I restriction-modification system, M subunit; PFAM: N-6 DNA methylase; KEGG: blo:BL1782 modification (methylase) protein of type I restriction-modification system; type I restriction-modification system, M subunit	1680696..1683272	Alkaliphilus metalliredigens QYMF	5311658
YP_001319444.1	CDS	Amet_1608	NC_009633.1	1683272	1684498	D	PFAM: restriction modification system DNA specificity domain; KEGG: lin:lin0523 hypothetical protein; restriction modification system DNA specificity subunit	1683272..1684498	Alkaliphilus metalliredigens QYMF	5311659
YP_001319445.1	CDS	Amet_1609	NC_009633.1	1684517	1687600	D	TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: type III restriction protein, res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases-like; KEGG: lca:LSEI_2095 type I site-specific restriction-modification system, R (restriction) subunit related helicase; HsdR family type I site-specific deoxyribonuclease	1684517..1687600	Alkaliphilus metalliredigens QYMF	5311660
YP_001319446.1	CDS	Amet_1610	NC_009633.1	1688019	1693046	D	PFAM: peptidase C14, caspase catalytic subunit p20; KEGG: she:Shewmr4_3209 putative transcriptional regulator; putative transcriptional regulator	1688019..1693046	Alkaliphilus metalliredigens QYMF	5311661
YP_001319447.1	CDS	Amet_1611	NC_009633.1	1693792	1695792	D	KEGG: mac:MA2602 hypothetical protein; hypothetical protein	1693792..1695792	Alkaliphilus metalliredigens QYMF	5311662
YP_001319448.1	CDS	Amet_1612	NC_009633.1	1696257	1697477	D	PFAM: transposase, mutator type; KEGG: cth:Cthe_3207 transposase, mutator type; transposase, mutator type	1696257..1697477	Alkaliphilus metalliredigens QYMF	5311663
YP_001319449.1	CDS	Amet_1613	NC_009633.1	1698868	1699563	D	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: tte:TTE0796 uncharacterized Fe-S protein; 4Fe-4S ferredoxin	1698868..1699563	Alkaliphilus metalliredigens QYMF	5311664
YP_001319450.1	CDS	Amet_1614	NC_009633.1	1699969	1701069	D	PFAM: polysaccharide deacetylase; KEGG: cth:Cthe_0175 polysaccharide deacetylase; polysaccharide deacetylase	1699969..1701069	Alkaliphilus metalliredigens QYMF	5311665
YP_001319451.1	CDS	Amet_1615	NC_009633.1	1701097	1702023	R	PFAM: Na+/Pi-cotransporter; KEGG: cpf:CPF_2677 Na/Pi-cotransporter family protein/PhoU family protein; Na+/Pi-cotransporter	complement(1701097..1702023)	Alkaliphilus metalliredigens QYMF	5311666
YP_001319452.1	CDS	Amet_1616	NC_009633.1	1702178	1703410	R	catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase	complement(1702178..1703410)	Alkaliphilus metalliredigens QYMF	5311667
YP_001319453.1	CDS	Amet_1617	NC_009633.1	1703563	1704327	D	PFAM: polysaccharide deacetylase; KEGG: ctc:CTC02298 chitooligosaccharide deacetylase; polysaccharide deacetylase	1703563..1704327	Alkaliphilus metalliredigens QYMF	5311668
YP_001319454.1	CDS	Amet_1618	NC_009633.1	1704444	1705985	D	TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase, middle domain protein; KEGG: bce:BC3914 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; UDP-N-acetylmuramyl tripeptide synthetase	1704444..1705985	Alkaliphilus metalliredigens QYMF	5311669
YP_001319455.1	CDS	Amet_1619	NC_009633.1	1706112	1706771	D	binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; single-stranded DNA-binding protein	1706112..1706771	Alkaliphilus metalliredigens QYMF	5311670
YP_001319456.1	CDS	Amet_1620	NC_009633.1	1707249	1707716	R	PFAM: GAF domain protein; KEGG: tte:TTE1743 GAF domain-containing protein; putative GAF sensor protein	complement(1707249..1707716)	Alkaliphilus metalliredigens QYMF	5311671
YP_001319457.1	CDS	Amet_1621	NC_009633.1	1707895	1708434	D	TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: cno:NT01CX_1811 hypoxanthine phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase	1707895..1708434	Alkaliphilus metalliredigens QYMF	5311672
YP_001319458.1	CDS	Amet_1622	NC_009633.1	1708594	1709757	D	TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: syf:Synpcc7942_0256 peptidase M20D, amidohydrolase; amidohydrolase	1708594..1709757	Alkaliphilus metalliredigens QYMF	5311673
YP_001319459.1	CDS	Amet_1623	NC_009633.1	1709778	1710782	D	PFAM: Abortive infection protein; KEGG: tte:TTE2577 predicted metal-dependent membrane protease; abortive infection protein	1709778..1710782	Alkaliphilus metalliredigens QYMF	5311674
YP_001319460.1	CDS	Amet_1624	NC_009633.1	1710911	1712326	D	KEGG: aci:ACIAD0613 conserved hypothetical protein; putative phospholipase D endonuclease domain; hypothetical protein	1710911..1712326	Alkaliphilus metalliredigens QYMF	5311675
YP_001319461.1	CDS	Amet_1625	NC_009633.1	1712594	1712794	D	KEGG: cpr:CPR_1870 small, acid-soluble spore protein, alpha/beta family; alpha/beta type small acid-soluble spore protein	1712594..1712794	Alkaliphilus metalliredigens QYMF	5311676
YP_001319462.1	CDS	Amet_1626	NC_009633.1	1712872	1713624	D	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bce:BC4326 methyltransferase; type 11 methyltransferase	1712872..1713624	Alkaliphilus metalliredigens QYMF	5311677
YP_001319463.1	CDS	Amet_1627	NC_009633.1	1713834	1714034	D	PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: efa:EF1367 cold-shock domain family protein; cold-shock DNA-binding domain-containing protein	1713834..1714034	Alkaliphilus metalliredigens QYMF	5311678
YP_001319464.1	CDS	hslO	NC_009633.1	1714328	1715206	D	becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers; Hsp33-like chaperonin	1714328..1715206	Alkaliphilus metalliredigens QYMF	5311679
YP_001319465.1	CDS	Amet_1629	NC_009633.1	1715798	1716709	D	PFAM: Sporulation protein YtxC; KEGG: cth:Cthe_2071 hypothetical protein; sporulation protein YtxC	1715798..1716709	Alkaliphilus metalliredigens QYMF	5311683
YP_001319466.1	CDS	Amet_1630	NC_009633.1	1717036	1717638	D	KEGG: mta:Moth_1760 hypothetical protein; hypothetical protein	1717036..1717638	Alkaliphilus metalliredigens QYMF	5311684
YP_001319467.1	CDS	thrS	NC_009633.1	1718079	1719989	D	catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase	1718079..1719989	Alkaliphilus metalliredigens QYMF	5311685
YP_001319468.1	CDS	Amet_1632	NC_009633.1	1720047	1721627	R	TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase, central domain protein; SMART: AAA ATPase; KEGG: tte:TTE1992 ATP-dependent Zn proteases; ATP-dependent metalloprotease FtsH	complement(1720047..1721627)	Alkaliphilus metalliredigens QYMF	5311686
YP_001319469.1	CDS	Amet_1633	NC_009633.1	1722063	1722491	D	TIGRFAM: translation initiation factor IF-3; PFAM: initiation factor 3; KEGG: cpr:CPR_1858 translation initiation factor IF-3; translation initiation factor IF-3	1722063..1722491	Alkaliphilus metalliredigens QYMF	5311687
YP_001319470.1	CDS	Amet_1634	NC_009633.1	1722512	1722703	D	PFAM: ribosomal protein L35; KEGG: cno:NT01CX_1762 ribosomal protein L35; 50S ribosomal protein L35	1722512..1722703	Alkaliphilus metalliredigens QYMF	5311688
YP_001319471.1	CDS	rplT	NC_009633.1	1722736	1723095	D	binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20	1722736..1723095	Alkaliphilus metalliredigens QYMF	5311689
YP_001319472.1	CDS	Amet_1636	NC_009633.1	1723363	1724712	D	TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter; KEGG: tte:TTE0196 trk-type K+ transport systems, membrane components; TrkH family potassium uptake protein	1723363..1724712	Alkaliphilus metalliredigens QYMF	5311690
YP_001319473.1	CDS	Amet_1637	NC_009633.1	1724726	1725370	D	PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: cpf:CPF_2142 putative potassium uptake protein; TrkA domain-containing protein	1724726..1725370	Alkaliphilus metalliredigens QYMF	5311691
YP_001319474.1	CDS	Amet_1638	NC_009633.1	1725385	1726203	D	TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase, substrate binding; KEGG: cth:Cthe_1222 RNA methyltransferase, TrmH family, group 3; RNA methyltransferase	1725385..1726203	Alkaliphilus metalliredigens QYMF	5311692
YP_001319475.1	CDS	pheS	NC_009633.1	1726781	1727800	D	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha	1726781..1727800	Alkaliphilus metalliredigens QYMF	5311693
YP_001319476.1	CDS	pheT	NC_009633.1	1727824	1730217	D	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta	1727824..1730217	Alkaliphilus metalliredigens QYMF	5311694
YP_001319477.1	CDS	Amet_1641	NC_009633.1	1730324	1730893	D	PFAM: protein of unknown function DUF710; KEGG: cac:CAC2355 hypothetical protein; hypothetical protein	1730324..1730893	Alkaliphilus metalliredigens QYMF	5311695
YP_001319478.1	CDS	Amet_1642	NC_009633.1	1731021	1733444	D	PFAM: peptidase U32; KEGG: tte:TTE1686 collagenase and related proteases; peptidase U32	1731021..1733444	Alkaliphilus metalliredigens QYMF	5311696
YP_001319479.1	CDS	Amet_1643	NC_009633.1	1733575	1734105	D	PFAM: regulatory protein, MarR; iron dependent repressor; KEGG: cth:Cthe_1402 iron (metal) dependent repressor, DtxR family; iron dependent repressor	1733575..1734105	Alkaliphilus metalliredigens QYMF	5311697
YP_001319480.1	CDS	Amet_1644	NC_009633.1	1734321	1735082	D	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bha:BH1389 putative manganese transport system ATP-binding protein; ABC transporter-like protein	1734321..1735082	Alkaliphilus metalliredigens QYMF	5311698
YP_001319481.1	CDS	Amet_1645	NC_009633.1	1735079	1735954	D	PFAM: ABC-3 protein; KEGG: bha:BH1390 putative manganese transport system permease protein; ABC-3 protein	1735079..1735954	Alkaliphilus metalliredigens QYMF	5311699
YP_001319482.1	CDS	Amet_1646	NC_009633.1	1736025	1736993	D	PFAM: periplasmic solute binding protein; KEGG: bha:BH0516 putative manganese transport system substrate-binding protein; periplasmic solute binding protein	1736025..1736993	Alkaliphilus metalliredigens QYMF	5311700
YP_001319483.1	CDS	Amet_1647	NC_009633.1	1737211	1738164	D	KEGG: tfu:Tfu_0754 putative ATP-binding protein; putative ATP-binding protein	1737211..1738164	Alkaliphilus metalliredigens QYMF	5311701
YP_001319484.1	CDS	Amet_1648	NC_009633.1	1738161	1739609	D	PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: nfa:nfa25650 putative decarboxylase; Orn/DAP/Arg decarboxylase 2	1738161..1739609	Alkaliphilus metalliredigens QYMF	5311702
YP_001319485.1	CDS	Amet_1649	NC_009633.1	1739629	1740957	D	PFAM: Pyridoxal-5'-phosphate-dependent protein, beta subunit; SMART: Rhodanese domain protein; KEGG: nfa:nfa25640 hypothetical protein; pyridoxal-5'-phosphate-dependent protein subunit beta	1739629..1740957	Alkaliphilus metalliredigens QYMF	5311703
YP_001319486.1	CDS	Amet_1650	NC_009633.1	1740960	1742189	D	PFAM: aminotransferase, class V; KEGG: nfa:nfa25670 hypothetical protein; class V aminotransferase	1740960..1742189	Alkaliphilus metalliredigens QYMF	5311704
YP_001319487.1	CDS	Amet_1651	NC_009633.1	1742457	1743197	D	KEGG: hwa:HQ2306A ABC-type cobalt transport system, permease protein I; Co2+ ABC transporter permease-like protein	1742457..1743197	Alkaliphilus metalliredigens QYMF	5311705
YP_001319488.1	CDS	Amet_1652	NC_009633.1	1743226	1743939	D	PFAM: cobalt transport protein; KEGG: ter:Tery_2781 cobalt ABC transporter, inner membrane subunit CbiQ; cobalt transport protein	1743226..1743939	Alkaliphilus metalliredigens QYMF	5311706
YP_001319489.1	CDS	Amet_1653	NC_009633.1	1743927	1744787	D	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mac:MA4020 ABC transporter, ATP-binding protein; ABC transporter-like protein	1743927..1744787	Alkaliphilus metalliredigens QYMF	5311707
YP_001319490.1	CDS	Amet_1654	NC_009633.1	1744904	1745599	D	PFAM: SNARE associated Golgi protein; KEGG: vfi:VFA0098 transporter; hypothetical protein	1744904..1745599	Alkaliphilus metalliredigens QYMF	5311708
YP_001319491.1	CDS	Amet_1655	NC_009633.1	1745933	1747291	D	KEGG: fnu:FN1852 hypothetical protein; hypothetical protein	1745933..1747291	Alkaliphilus metalliredigens QYMF	5311709
YP_001319492.1	CDS	Amet_1656	NC_009633.1	1747630	1747878	D	PFAM: Excinuclease ABC, C subunit domain protein; KEGG: cno:NT01CX_2293 endo/excinuclease domain protein; excinuclease ABC subunit C	1747630..1747878	Alkaliphilus metalliredigens QYMF	5311710
YP_001319493.1	CDS	Amet_1657	NC_009633.1	1748151	1749314	D	PFAM: iron-containing alcohol dehydrogenase; KEGG: dsy:DSY0565 hypothetical protein; iron-containing alcohol dehydrogenase	1748151..1749314	Alkaliphilus metalliredigens QYMF	5311711
YP_001319494.1	CDS	Amet_1658	NC_009633.1	1749430	1750575	R	KEGG: cac:CAC0871 hypothetical protein; hypothetical protein	complement(1749430..1750575)	Alkaliphilus metalliredigens QYMF	5311712
YP_001319495.1	CDS	Amet_1659	NC_009633.1	1750764	1751501	D	KEGG: pca:Pcar_2755 nitroreductase; nitroreductase	1750764..1751501	Alkaliphilus metalliredigens QYMF	5311713
YP_001319496.1	CDS	Amet_1660	NC_009633.1	1751574	1752146	R	PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: cth:Cthe_0614 pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate ferredoxin/flavodoxin oxidoreductase	complement(1751574..1752146)	Alkaliphilus metalliredigens QYMF	5311714
YP_001319497.1	CDS	Amet_1661	NC_009633.1	1752160	1753947	R	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; KEGG: swo:Swol_1196 thiamine pyrophosphate enzyme; indolepyruvate ferredoxin oxidoreductase	complement(1752160..1753947)	Alkaliphilus metalliredigens QYMF	5311715
YP_001319498.1	CDS	Amet_1662	NC_009633.1	1754576	1756972	D	TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated HD domain protein; PFAM: helicase domain protein; SMART: DEAD-like helicases-like; KEGG: mla:Mlab_0850 hypothetical protein; CRISPR-associated helicase Cas3	1754576..1756972	Alkaliphilus metalliredigens QYMF	5311716
YP_001319499.1	CDS	Amet_1663	NC_009633.1	1756987	1757739	D	TIGRFAM: CRISPR-associated protein Cas5 family; CRISPR-associated protein Cas5; KEGG: mla:Mlab_0849 hypothetical protein; CRISPR-associated Cas5 family protein	1756987..1757739	Alkaliphilus metalliredigens QYMF	5311717
YP_001319500.1	CDS	Amet_1664	NC_009633.1	1757723	1759678	D	TIGRFAM: CRISPR-associated protein, Csd1 family; KEGG: bcl:ABC3595 hypothetical protein; CRISPR-associated RAMP Csd1 family protein	1757723..1759678	Alkaliphilus metalliredigens QYMF	5311718
YP_001319501.1	CDS	Amet_1665	NC_009633.1	1759694	1760554	D	TIGRFAM: CRISPR-associated protein, CT1132 family; CRISPR-associated protein, Csd2 family; PFAM: CRISPR-associated protein TM1801; KEGG: bha:BH0339 hypothetical protein; CRISPR-associated Csd2 family protein	1759694..1760554	Alkaliphilus metalliredigens QYMF	5311719
YP_001319502.1	CDS	Amet_1666	NC_009633.1	1760541	1761209	D	TIGRFAM: CRISPR-associated protein Cas4; KEGG: bad:BAD_1181 hypothetical protein; CRISPR-associated Cas4 family protein	1760541..1761209	Alkaliphilus metalliredigens QYMF	5311720
YP_001319503.1	CDS	Amet_1667	NC_009633.1	1761206	1762237	D	TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48; KEGG: bcl:ABC3592 hypothetical protein; CRISPR-associated Cas1 family protein	1761206..1762237	Alkaliphilus metalliredigens QYMF	5311721
YP_001319504.1	CDS	Amet_1668	NC_009633.1	1762246	1762536	D	TIGRFAM: CRISPR-associated protein Cas2; PFAM: protein of unknown function DUF196; KEGG: bcl:ABC3591 hypothetical protein; CRISPR-associated Cas2 family protein	1762246..1762536	Alkaliphilus metalliredigens QYMF	5311722
YP_001319505.1	CDS	Amet_1669	NC_009633.1	1764000	1765043	R	PFAM: NADPH-dependent FMN reductase; NADPH-dependent FMN reductase	complement(1764000..1765043)	Alkaliphilus metalliredigens QYMF	5311723
YP_001319506.1	CDS	Amet_1670	NC_009633.1	1765040	1766284	R	KEGG: llm:llmg_1429 L-lactate dehydrogenase; malate/lactate dehydrogenase-like protein	complement(1765040..1766284)	Alkaliphilus metalliredigens QYMF	5311724
YP_001319507.1	CDS	Amet_1671	NC_009633.1	1766303	1771198	R	PFAM: cytidylyltransferase; cytidylyltransferase	complement(1766303..1771198)	Alkaliphilus metalliredigens QYMF	5311725
YP_001319508.1	CDS	Amet_1672	NC_009633.1	1771688	1772071	D	PFAM: RDD domain containing protein; KEGG: ctc:CTC01455 hypothetical protein; RDD domain-containing protein	1771688..1772071	Alkaliphilus metalliredigens QYMF	5311726
YP_001319509.1	CDS	Amet_1673	NC_009633.1	1772263	1773090	D	PFAM: extracellular solute-binding protein, family 3; KEGG: cno:NT01CX_0932 amino acid ABC transporter, substrate-binding protein; extracellular solute-binding protein	1772263..1773090	Alkaliphilus metalliredigens QYMF	5311727
YP_001319510.1	CDS	Amet_1674	NC_009633.1	1773187	1773840	D	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ssp:SSP0937 truncated ABC-type amino acid transport system periplasmic component; polar amino acid ABC transporter inner membrane subunit	1773187..1773840	Alkaliphilus metalliredigens QYMF	5311728
YP_001319511.1	CDS	Amet_1675	NC_009633.1	1773827	1774564	D	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cno:NT01CX_0934 ABC transporter; ABC transporter-like protein	1773827..1774564	Alkaliphilus metalliredigens QYMF	5311729
YP_001319512.1	CDS	Amet_1676	NC_009633.1	1774790	1778320	D	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: cth:Cthe_3120 pyruvate flavodoxin/ferredoxin oxidoreductase-like protein; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein	1774790..1778320	Alkaliphilus metalliredigens QYMF	5311730
YP_001319513.1	CDS	Amet_1677	NC_009633.1	1778721	1780196	D	amylomaltase; acts to release glucose from maltodextrins; 4-alpha-glucanotransferase	1778721..1780196	Alkaliphilus metalliredigens QYMF	5311731
YP_001319514.1	CDS	Amet_1678	NC_009633.1	1780205	1782565	D	TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase, family 35; KEGG: cno:NT01CX_0970 glycogen phosphorylase; glycogen/starch/alpha-glucan phosphorylase	1780205..1782565	Alkaliphilus metalliredigens QYMF	5311732
YP_001319515.1	CDS	Amet_1679	NC_009633.1	1782753	1783343	D	PFAM: protein of unknown function DUF218; KEGG: pst:PSPTO_4635 hypothetical protein; hypothetical protein	1782753..1783343	Alkaliphilus metalliredigens QYMF	5311733
YP_001319516.1	CDS	Amet_1680	NC_009633.1	1783387	1783866	D	PFAM: protein of unknown function DUF984; KEGG: cac:CAC1000 uncharacterized protein, homolog of YhfF B.subtilis; hypothetical protein	1783387..1783866	Alkaliphilus metalliredigens QYMF	5311734
YP_001319517.1	CDS	Amet_1681	NC_009633.1	1784126	1784665	D	TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: oih:OB3092 RNA polymerase ECF-type sigma factor; ECF subfamily RNA polymerase sigma-24 factor	1784126..1784665	Alkaliphilus metalliredigens QYMF	5311735
YP_001319518.1	CDS	Amet_1682	NC_009633.1	1784658	1785440	D	KEGG: oih:OB3091 hypothetical protein; hypothetical protein	1784658..1785440	Alkaliphilus metalliredigens QYMF	5311736
YP_001319519.1	CDS	Amet_1683	NC_009633.1	1785723	1785893	R	KEGG: cth:Cthe_3121 hypothetical protein; hypothetical protein	complement(1785723..1785893)	Alkaliphilus metalliredigens QYMF	5311737
YP_001319520.1	CDS	Amet_1684	NC_009633.1	1786369	1787646	D	TIGRFAM: uracil-xanthine permease; PFAM: Benzoate membrane transport protein; Xanthine/uracil/vitamin C permease; KEGG: cno:NT01CX_0192 uracil-xanthine permease; uracil-xanthine permease	1786369..1787646	Alkaliphilus metalliredigens QYMF	5311738
YP_001319521.1	CDS	Amet_1685	NC_009633.1	1788029	1788694	D	hypothetical protein	1788029..1788694	Alkaliphilus metalliredigens QYMF	5311739
YP_001319522.1	CDS	Amet_1686	NC_009633.1	1788684	1788959	D	KEGG: swo:Swol_0148 transposase and inactivated derivatives-like protein; hypothetical protein	1788684..1788959	Alkaliphilus metalliredigens QYMF	5311740
YP_001319523.1	CDS	Amet_1688	NC_009633.1	1789630	1790397	D	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: lwe:lwe2133 ABC transporter, ATP-binding protein; ABC transporter-like protein	1789630..1790397	Alkaliphilus metalliredigens QYMF	5311742
YP_001319524.1	CDS	Amet_1689	NC_009633.1	1790384	1792243	D	PFAM: protein of unknown function DUF214; KEGG: bca:BCE_4984 ABC transporter, permease protein; hypothetical protein	1790384..1792243	Alkaliphilus metalliredigens QYMF	5311743
YP_001319525.1	CDS	Amet_1690	NC_009633.1	1792245	1792613	D	PFAM: conserved hypothetical protein 1655; KEGG: btl:BALH_4471 hypothetical protein; hypothetical protein	1792245..1792613	Alkaliphilus metalliredigens QYMF	5311744
YP_001319526.1	CDS	Amet_1691	NC_009633.1	1792704	1793417	D	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: btk:BT9727_0923 probable two-component response regulator; probable MrsR2 protein; two component transcriptional regulator	1792704..1793417	Alkaliphilus metalliredigens QYMF	5311745
YP_001319527.1	CDS	Amet_1692	NC_009633.1	1793420	1794823	D	PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; KEGG: cac:CAC0290 sensory transduction histidine kinase; integral membrane sensor signal transduction histidine kinase	1793420..1794823	Alkaliphilus metalliredigens QYMF	5311746
YP_001319528.1	CDS	Amet_1693	NC_009633.1	1795071	1795286	D	hypothetical protein	1795071..1795286	Alkaliphilus metalliredigens QYMF	5311747
YP_001319529.1	CDS	Amet_1694	NC_009633.1	1795572	1796684	D	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: tte:TTE0177 uncharacterized Fe-S center protein; 4Fe-4S ferredoxin	1795572..1796684	Alkaliphilus metalliredigens QYMF	5311748
YP_001319530.1	CDS	Amet_1695	NC_009633.1	1796736	1797896	D	PFAM: metallophosphoesterase; KEGG: mma:MM3285 hypothetical protein; metallophosphoesterase	1796736..1797896	Alkaliphilus metalliredigens QYMF	5311749
YP_001319531.1	CDS	Amet_1696	NC_009633.1	1797975	1798313	D	PFAM: Domain of unknown function DUF1874; KEGG: bsu:BG12113 hypothetical protein; hypothetical protein	1797975..1798313	Alkaliphilus metalliredigens QYMF	5311750
YP_001319532.1	CDS	Amet_1697	NC_009633.1	1798375	1799562	D	PFAM: beta-lactamase domain protein; flavodoxin/nitric oxide synthase; KEGG: mta:Moth_1287 beta-lactamase-like; flavodoxin/nitric oxide synthase	1798375..1799562	Alkaliphilus metalliredigens QYMF	5311751
YP_001319533.1	CDS	Amet_1698	NC_009633.1	1799732	1800238	D	PFAM: GCN5-related N-acetyltransferase; KEGG: bld:BLi01935 putative phosphinothricin N-acetyltransferase; RBL02351; N-acetyltransferase GCN5	1799732..1800238	Alkaliphilus metalliredigens QYMF	5311752
YP_001319534.1	CDS	Amet_1699	NC_009633.1	1800291	1801463	R	TIGRFAM: TraB family protein; PFAM: TraB determinant protein; KEGG: dsy:DSY1534 hypothetical protein; TraB family protein	complement(1800291..1801463)	Alkaliphilus metalliredigens QYMF	5311753
YP_001319535.1	CDS	Amet_1700	NC_009633.1	1801931	1802923	D	TIGRFAM: Quinone oxidoreductase putative, YhdH/YhfP; PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: gka:GK1429 hypothetical protein; quinone oxidoreductase	1801931..1802923	Alkaliphilus metalliredigens QYMF	5311754
YP_001319536.1	CDS	Amet_1701	NC_009633.1	1803130	1806057	D	PFAM: peptidase M16 domain protein; Peptidase M16C associated domain protein; KEGG: cno:NT01CX_1662 Zn-dependent peptidase, insulinase family; peptidase M16C associated domain-containing protein	1803130..1806057	Alkaliphilus metalliredigens QYMF	5311755
YP_001319537.1	CDS	Amet_1702	NC_009633.1	1806097	1807710	R	catalyzes the hydrolysis of pyrophosphate to phosphate; putative manganese-dependent inorganic pyrophosphatase	complement(1806097..1807710)	Alkaliphilus metalliredigens QYMF	5311756
YP_001319538.1	CDS	Amet_1703	NC_009633.1	1807988	1808305	D	KEGG: ctc:CTC00658 hypothetical protein; hypothetical protein	1807988..1808305	Alkaliphilus metalliredigens QYMF	5311757
YP_001319539.1	CDS	Amet_1704	NC_009633.1	1808375	1809610	D	TIGRFAM: competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; CinA domain protein; KEGG: cac:CAC3586 competence-damage inducible protein, CINA; competence damage-inducible protein A	1808375..1809610	Alkaliphilus metalliredigens QYMF	5311758
YP_001319540.1	CDS	Amet_1705	NC_009633.1	1809695	1810849	D	PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: cac:CAC0277 HD-GYP hydrolase domain containing protein; metal dependent phosphohydrolase	1809695..1810849	Alkaliphilus metalliredigens QYMF	5311759
YP_001319541.1	CDS	Amet_1706	NC_009633.1	1811105	1812058	D	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: btk:BT9727_0531 NAD-dependent epimerase/dehydratase; L-threonine dehydrogenase; NAD-dependent epimerase/dehydratase	1811105..1812058	Alkaliphilus metalliredigens QYMF	5311760
YP_001319542.1	CDS	Amet_1707	NC_009633.1	1812252	1812848	D	primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4	1812252..1812848	Alkaliphilus metalliredigens QYMF	5311761
YP_001319543.1	CDS	Amet_1708	NC_009633.1	1812996	1814099	D	PFAM: alanine racemase domain protein; KEGG: fnu:FN0552 serine racemase; alanine racemase domain-containing protein	1812996..1814099	Alkaliphilus metalliredigens QYMF	5311762
YP_001319544.1	CDS	Amet_1709	NC_009633.1	1814150	1814899	R	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: cno:NT01CX_0777 peptidil-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase	complement(1814150..1814899)	Alkaliphilus metalliredigens QYMF	5311763
YP_001319545.1	CDS	Amet_1710	NC_009633.1	1815168	1816979	D	TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor, GTP-binding; elongation factor Tu, domain 2 protein; KEGG: cth:Cthe_1007 GTP-binding protein TypA; GTP-binding protein TypA	1815168..1816979	Alkaliphilus metalliredigens QYMF	5311764
YP_001319546.1	CDS	Amet_1711	NC_009633.1	1817319	1818296	D	PFAM: polysaccharide deacetylase; KEGG: cno:NT01CX_0701 polysaccharide deacetylase family protein; polysaccharide deacetylase	1817319..1818296	Alkaliphilus metalliredigens QYMF	5311765
YP_001319547.1	CDS	Amet_1712	NC_009633.1	1818357	1820726	D	TIGRFAM: MutS2 family protein; PFAM: DNA mismatch repair protein MutS domain protein; Smr protein/MutS2; SMART: MutS III domain protein; KEGG: cth:Cthe_1014 MutS2 family protein; MutS2 family protein	1818357..1820726	Alkaliphilus metalliredigens QYMF	5311766
YP_001319548.1	CDS	Amet_1713	NC_009633.1	1820794	1821225	D	PFAM: protein of unknown function DUF523; KEGG: swo:Swol_1164 hypothetical protein; hypothetical protein	1820794..1821225	Alkaliphilus metalliredigens QYMF	5311767
YP_001319549.1	CDS	argS	NC_009633.1	1821630	1823330	D	catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase	1821630..1823330	Alkaliphilus metalliredigens QYMF	5311768
YP_001319550.1	CDS	Amet_1715	NC_009633.1	1823520	1826012	D	PFAM: extracellular solute-binding protein, family 5; chemotaxis sensory transducer; KEGG: sth:STH128 oligopeptide ABC transporter substrate-binding protein; methyl-accepting chemotaxis sensory transducer	1823520..1826012	Alkaliphilus metalliredigens QYMF	5311769
YP_001319551.1	CDS	Amet_1716	NC_009633.1	1826151	1827287	D	hypothetical protein	1826151..1827287	Alkaliphilus metalliredigens QYMF	5311770
YP_001319552.1	CDS	Amet_1717	NC_009633.1	1827315	1827509	R	hypothetical protein	complement(1827315..1827509)	Alkaliphilus metalliredigens QYMF	5311771
YP_001319553.1	CDS	Amet_1718	NC_009633.1	1827552	1828997	D	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: cno:NT01CX_0730 MATE efflux family protein; MATE efflux family protein	1827552..1828997	Alkaliphilus metalliredigens QYMF	5311772
YP_001319554.1	CDS	Amet_1719	NC_009633.1	1829044	1829652	R	KEGG: cpr:CPR_2292 hypothetical protein; hypothetical protein	complement(1829044..1829652)	Alkaliphilus metalliredigens QYMF	5311773
YP_001319555.1	CDS	Amet_1720	NC_009633.1	1829815	1830456	R	hypothetical protein	complement(1829815..1830456)	Alkaliphilus metalliredigens QYMF	5311774
YP_001319556.1	CDS	Amet_1721	NC_009633.1	1830637	1831392	D	KEGG: dre:566887 hypothetical LOC566887; hypothetical protein	1830637..1831392	Alkaliphilus metalliredigens QYMF	5311775
YP_001319557.1	CDS	Amet_1722	NC_009633.1	1831394	1833157	D	PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cth:Cthe_3186 radical SAM; radical SAM domain-containing protein	1831394..1833157	Alkaliphilus metalliredigens QYMF	5311776
YP_001319558.1	CDS	Amet_1723	NC_009633.1	1833189	1833941	D	hypothetical protein	1833189..1833941	Alkaliphilus metalliredigens QYMF	5311777
YP_001319559.1	CDS	Amet_1724	NC_009633.1	1833941	1834426	D	PFAM: GCN5-related N-acetyltransferase; KEGG: gka:GK0927 acetyltransferase (GNAT family); N-acetyltransferase GCN5	1833941..1834426	Alkaliphilus metalliredigens QYMF	5311778
YP_001319560.1	CDS	Amet_1725	NC_009633.1	1834446	1835576	D	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: cpr:CPR_1840 TPR domain protein; hypothetical protein	1834446..1835576	Alkaliphilus metalliredigens QYMF	5311779
YP_001319561.1	CDS	Amet_1726	NC_009633.1	1835764	1836672	D	PFAM: phosphate acetyl/butaryl transferase; KEGG: tte:TTE2195 phosphotransacetylase; phosphate butyryltransferase	1835764..1836672	Alkaliphilus metalliredigens QYMF	5311780
YP_001319562.1	CDS	Amet_1727	NC_009633.1	1844667	1844927	R	hypothetical protein	complement(1844667..1844927)	Alkaliphilus metalliredigens QYMF	5311798
YP_001319563.1	CDS	Amet_1728	NC_009633.1	1844964	1845569	R	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bha:BH0418 unknown conserved protein in others; type 11 methyltransferase	complement(1844964..1845569)	Alkaliphilus metalliredigens QYMF	5311799
YP_001319564.1	CDS	Amet_1729	NC_009633.1	1845984	1846184	D	TIGRFAM: DNA binding domain, excisionase family; KEGG: she:Shewmr4_2780 phage transcriptional regulator, AlpA; DNA binding domain-containing protein	1845984..1846184	Alkaliphilus metalliredigens QYMF	5311800
YP_001319565.1	CDS	Amet_1730	NC_009633.1	1846281	1846529	D	hypothetical protein	1846281..1846529	Alkaliphilus metalliredigens QYMF	5311801
YP_001319566.1	CDS	Amet_1731	NC_009633.1	1846873	1847424	D	KEGG: mmp:MMP0549 hypothetical protein; hypothetical protein	1846873..1847424	Alkaliphilus metalliredigens QYMF	5311802
YP_001319567.1	CDS	Amet_1732	NC_009633.1	1847451	1848893	D	PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: ctc:CTC01995 2',3'-cyclic-nucleotide 2'-phosphodiesterase; metallophosphoesterase	1847451..1848893	Alkaliphilus metalliredigens QYMF	5311803
YP_001319568.1	CDS	Amet_1733	NC_009633.1	1849149	1850222	D	PFAM: ABC transporter related; transport-associated protein OB domain protein; SMART: AAA ATPase; KEGG: tma:TM0421 multiple sugar transport system ATP-binding protein; ABC transporter-like protein	1849149..1850222	Alkaliphilus metalliredigens QYMF	5311804
YP_001319569.1	CDS	Amet_1734	NC_009633.1	1850219	1851112	D	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lca:LSEI_0990 ABC-type sugar transport system, permease component; binding-protein-dependent transport system inner membrane protein	1850219..1851112	Alkaliphilus metalliredigens QYMF	5311805
YP_001319570.1	CDS	Amet_1735	NC_009633.1	1851133	1851954	D	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lca:LSEI_0989 ABC-type maltose transport system, permease component; binding-protein-dependent transport system inner membrane protein	1851133..1851954	Alkaliphilus metalliredigens QYMF	5311806
YP_001319571.1	CDS	Amet_1736	NC_009633.1	1851979	1853307	D	PFAM: extracellular solute-binding protein, family 1; KEGG: tma:TM0595 multiple sugar transport system substrate-binding protein; extracellular solute-binding protein	1851979..1853307	Alkaliphilus metalliredigens QYMF	5311807
YP_001319572.1	CDS	Amet_1737	NC_009633.1	1853424	1855532	R	PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH, type 1, domain protein; SMART: KH domain protein; KEGG: tte:TTE1387 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase); polynucleotide phosphorylase/polyadenylase	complement(1853424..1855532)	Alkaliphilus metalliredigens QYMF	5311808
YP_001319573.1	CDS	Amet_1739	NC_009633.1	1855980	1856168	R	hypothetical protein	complement(1855980..1856168)	Alkaliphilus metalliredigens QYMF	5311810
YP_001319574.1	CDS	Amet_1740	NC_009633.1	1856570	1856815	D	hypothetical protein	1856570..1856815	Alkaliphilus metalliredigens QYMF	5311811
YP_001319575.1	CDS	Amet_1741	NC_009633.1	1857005	1857325	D	hypothetical protein	1857005..1857325	Alkaliphilus metalliredigens QYMF	5311812
YP_001319576.1	CDS	Amet_1742	NC_009633.1	1857348	1857467	D	hypothetical protein	1857348..1857467	Alkaliphilus metalliredigens QYMF	5311813
YP_001319577.1	CDS	Amet_1743	NC_009633.1	1857744	1858100	D	PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: tte:TTE2462 hypothetical protein; BFD/(2Fe-2S)-binding domain-containing protein	1857744..1858100	Alkaliphilus metalliredigens QYMF	5311814
YP_001319578.1	CDS	Amet_1745	NC_009633.1	1862911	1863174	D	hypothetical protein	1862911..1863174	Alkaliphilus metalliredigens QYMF	5311816
YP_001319579.1	CDS	Amet_1746	NC_009633.1	1863188	1863439	D	PFAM: LexA DNA-binding domain protein; KEGG: efa:EF1579 transcriptional repressor LexA; LexA family transcriptional regulator	1863188..1863439	Alkaliphilus metalliredigens QYMF	5311817
YP_001319580.1	CDS	Amet_1747	NC_009633.1	1863530	1863655	D	hypothetical protein	1863530..1863655	Alkaliphilus metalliredigens QYMF	5311818
YP_001319581.1	CDS	Amet_1749	NC_009633.1	1864505	1864633	D	hypothetical protein	1864505..1864633	Alkaliphilus metalliredigens QYMF	5311820
YP_001319582.1	CDS	Amet_1750	NC_009633.1	1864634	1864939	D	hypothetical protein	1864634..1864939	Alkaliphilus metalliredigens QYMF	5311821
YP_001319583.1	CDS	Amet_1751	NC_009633.1	1864989	1865141	D	hypothetical protein	1864989..1865141	Alkaliphilus metalliredigens QYMF	5311822
YP_001319584.1	CDS	Amet_1752	NC_009633.1	1865535	1865984	D	hypothetical protein	1865535..1865984	Alkaliphilus metalliredigens QYMF	5311823
YP_001319585.1	CDS	Amet_1753	NC_009633.1	1866076	1867536	R	KEGG: ctc:CTC00917 transposase; transposase	complement(1866076..1867536)	Alkaliphilus metalliredigens QYMF	5311824
YP_001319586.1	CDS	Amet_1754	NC_009633.1	1867640	1869874	D	KEGG: dsy:DSY0935 hypothetical protein; hypothetical protein	1867640..1869874	Alkaliphilus metalliredigens QYMF	5311825
YP_001319587.1	CDS	Amet_1755	NC_009633.1	1870252	1871907	D	PFAM: von Willebrand factor, type A; KEGG: sus:Acid_6218 von Willebrand factor, type A; von Willebrand factor type A domain-containing protein	1870252..1871907	Alkaliphilus metalliredigens QYMF	5311826
YP_001319588.1	CDS	Amet_1757	NC_009633.1	1873755	1874501	R	PFAM: IstB domain protein ATP-binding protein; IstB ATP binding N-terminal domain protein; KEGG: swo:Swol_0734 ATP binding protein; IstB ATP binding domain-containing protein	complement(1873755..1874501)	Alkaliphilus metalliredigens QYMF	5311828
YP_001319589.1	CDS	Amet_1758	NC_009633.1	1874501	1876048	R	PFAM: Integrase, catalytic region; KEGG: pst:PSPTO_2841 ISPsy14, transposase; integrase catalytic subunit	complement(1874501..1876048)	Alkaliphilus metalliredigens QYMF	5311829
YP_001319590.1	CDS	Amet_1759	NC_009633.1	1876562	1877212	D	hypothetical protein	1876562..1877212	Alkaliphilus metalliredigens QYMF	5311830
YP_001319591.1	CDS	Amet_1760	NC_009633.1	1877766	1878485	D	PFAM: Tellurite resistance protein TehB; thiopurine S-methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: btl:BALH_2222 methyltransferase; type 11 methyltransferase	1877766..1878485	Alkaliphilus metalliredigens QYMF	5311831
YP_001319592.1	CDS	Amet_1761	NC_009633.1	1878559	1878981	D	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: llm:llmg_1077 putative glyoxalase family protein; glyoxalase/bleomycin resistance protein/dioxygenase	1878559..1878981	Alkaliphilus metalliredigens QYMF	5311832
YP_001319593.1	CDS	Amet_1762	NC_009633.1	1879148	1879381	D	hypothetical protein	1879148..1879381	Alkaliphilus metalliredigens QYMF	5311833
YP_001319594.1	CDS	Amet_1763	NC_009633.1	1879534	1880007	D	KEGG: ctc:pE88_51 hypothetical membrane-spanning protein; hypothetical protein	1879534..1880007	Alkaliphilus metalliredigens QYMF	5311834
YP_001319595.1	CDS	Amet_1764	NC_009633.1	1880701	1881312	D	hypothetical protein	1880701..1881312	Alkaliphilus metalliredigens QYMF	5311835
YP_001319596.1	CDS	Amet_1765	NC_009633.1	1881631	1883184	D	PFAM: Integrase, catalytic region; KEGG: bha:BH3965 transposase (22); integrase catalytic subunit	1881631..1883184	Alkaliphilus metalliredigens QYMF	5311836
YP_001319597.1	CDS	Amet_1766	NC_009633.1	1883172	1883915	D	PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: dsy:DSY0836 hypothetical protein; IstB ATP binding domain-containing protein	1883172..1883915	Alkaliphilus metalliredigens QYMF	5311837
YP_001319598.1	CDS	Amet_1767	NC_009633.1	1883919	1884128	D	hypothetical protein	1883919..1884128	Alkaliphilus metalliredigens QYMF	5311838
YP_001319599.1	CDS	Amet_1768	NC_009633.1	1884753	1884989	D	hypothetical protein	1884753..1884989	Alkaliphilus metalliredigens QYMF	5311839
YP_001319600.1	CDS	Amet_1769	NC_009633.1	1885233	1886336	D	PFAM: UMUC domain protein DNA-repair protein; KEGG: dsy:DSY3422 hypothetical protein; DNA-directed DNA polymerase	1885233..1886336	Alkaliphilus metalliredigens QYMF	5311840
YP_001319601.1	CDS	Amet_1770	NC_009633.1	1886963	1887667	R	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bat:BAS0256 DNA-binding response regulator; two component transcriptional regulator	complement(1886963..1887667)	Alkaliphilus metalliredigens QYMF	5311841
YP_001319602.1	CDS	Amet_1771	NC_009633.1	1887721	1889841	R	PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; Diverse 7TM receptor, transmembrane region; KEGG: swo:Swol_1622 response regulator receiver protein; integral membrane sensor signal transduction histidine kinase	complement(1887721..1889841)	Alkaliphilus metalliredigens QYMF	5311842
YP_001319603.1	CDS	Amet_1772	NC_009633.1	1890153	1890542	D	PFAM: flagellar protein FlaG protein; KEGG: cth:Cthe_2219 flagellar protein FlaG protein; flagellar protein FlaG protein	1890153..1890542	Alkaliphilus metalliredigens QYMF	5311843
YP_001319604.1	CDS	Amet_1773	NC_009633.1	1890623	1895140	D	TIGRFAM: cell wall/surface repeat protein; PFAM: S-layer domain protein; legume lectin, beta domain; KEGG: swo:Swol_0293 hypothetical protein; cell wall/surface repeat-containing protein	1890623..1895140	Alkaliphilus metalliredigens QYMF	5311844
YP_001319605.1	CDS	Amet_1774	NC_009633.1	1895318	1895476	D	hypothetical protein	1895318..1895476	Alkaliphilus metalliredigens QYMF	5311845
YP_001319606.1	CDS	Amet_1775	NC_009633.1	1896421	1897191	R	PFAM: protein of unknown function DUF6, transmembrane; KEGG: integral membrane protein; hypothetical protein	complement(1896421..1897191)	Alkaliphilus metalliredigens QYMF	5311846
YP_001319607.1	CDS	Amet_1776	NC_009633.1	1897176	1897580	R	hypothetical protein	complement(1897176..1897580)	Alkaliphilus metalliredigens QYMF	5311847
YP_001319608.1	CDS	Amet_1777	NC_009633.1	1897608	1897913	R	PFAM: IS66 Orf2 family protein; KEGG: swo:Swol_2210 IS66 Orf2 like; IS66 Orf2 family protein	complement(1897608..1897913)	Alkaliphilus metalliredigens QYMF	5311848
YP_001319609.1	CDS	Amet_1778	NC_009633.1	1897903	1898241	R	KEGG: swo:Swol_2283 hypothetical protein; hypothetical protein	complement(1897903..1898241)	Alkaliphilus metalliredigens QYMF	5311849
YP_001319610.1	CDS	Amet_1779	NC_009633.1	1898467	1899039	D	PFAM: regulatory protein, TetR; KEGG: ana:alr1721 transcriptional regulator; TetR family transcriptional regulator	1898467..1899039	Alkaliphilus metalliredigens QYMF	5311850
YP_001319611.1	CDS	Amet_1780	NC_009633.1	1899141	1899371	D	KEGG: xfa:XF2716 ketoreductase; ketoreductase	1899141..1899371	Alkaliphilus metalliredigens QYMF	5311851
YP_001319612.1	CDS	Amet_1781	NC_009633.1	1899376	1899741	D	Contains selenocysteine; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mla:Mlab_0618 hypothetical protein; 4Fe-4S ferredoxin	1899376..1899741	Alkaliphilus metalliredigens QYMF	5311852
YP_001319613.1	CDS	Amet_1782	NC_009633.1	1899849	1900961	D	PFAM: metallophosphoesterase; KEGG: mth:MTH1179 hypothetical protein; metallophosphoesterase	1899849..1900961	Alkaliphilus metalliredigens QYMF	5311853
YP_001319614.1	CDS	Amet_1783	NC_009633.1	1900963	1901520	D	KEGG: bce:BC4829 ribosomal RNA adenine dimethylase; ribosomal RNA adenine dimethylase	1900963..1901520	Alkaliphilus metalliredigens QYMF	5311854
YP_001319615.1	CDS	Amet_1784	NC_009633.1	1902249	1902821	D	hypothetical protein	1902249..1902821	Alkaliphilus metalliredigens QYMF	5311855
YP_001319616.1	CDS	Amet_1785	NC_009633.1	1903111	1906020	D	PFAM: helicase domain protein; DNA primase, small subunit; type III restriction protein, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: dsy:DSY4376 hypothetical protein; type III restriction protein, res subunit	1903111..1906020	Alkaliphilus metalliredigens QYMF	5311856
YP_001319617.1	CDS	Amet_1787	NC_009633.1	1906863	1907333	D	hypothetical protein	1906863..1907333	Alkaliphilus metalliredigens QYMF	5311858
YP_001319618.1	CDS	Amet_1788	NC_009633.1	1907675	1908625	D	KEGG: cth:Cthe_0744 copper amine oxidase-like protein; hypothetical protein	1907675..1908625	Alkaliphilus metalliredigens QYMF	5311859
YP_001319619.1	CDS	Amet_1789	NC_009633.1	1909801	1910442	D	hypothetical protein	1909801..1910442	Alkaliphilus metalliredigens QYMF	5311860
YP_001319620.1	CDS	Amet_1790	NC_009633.1	1910559	1910846	D	hypothetical protein	1910559..1910846	Alkaliphilus metalliredigens QYMF	5311861
YP_001319621.1	CDS	Amet_1791	NC_009633.1	1912198	1912470	D	KEGG: sat:SYN_03210 transposase and inactivated derivatives; transposase and inactivated derivatives	1912198..1912470	Alkaliphilus metalliredigens QYMF	5311862
YP_001319622.1	CDS	Amet_1792	NC_009633.1	1913002	1913325	R	hypothetical protein	complement(1913002..1913325)	Alkaliphilus metalliredigens QYMF	5311863
YP_001319623.1	CDS	Amet_1793	NC_009633.1	1913328	1913684	R	hypothetical protein	complement(1913328..1913684)	Alkaliphilus metalliredigens QYMF	5311864
YP_001319624.1	CDS	Amet_1794	NC_009633.1	1913728	1913937	R	KEGG: chy:CHY_0145 hypothetical protein; hypothetical protein	complement(1913728..1913937)	Alkaliphilus metalliredigens QYMF	5311865
YP_001319625.1	CDS	Amet_1796	NC_009633.1	1914551	1914868	D	hypothetical protein	1914551..1914868	Alkaliphilus metalliredigens QYMF	5311867
YP_001319626.1	CDS	Amet_1797	NC_009633.1	1915025	1915201	D	KEGG: cpe:CPE0258 probable transcriptional regulator; hypothetical protein	1915025..1915201	Alkaliphilus metalliredigens QYMF	5311868
YP_001319627.1	CDS	Amet_1798	NC_009633.1	1915404	1915967	D	TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: gka:GK0150 DNA-directed RNA polymerase ECF-type sigma factor (sigma-W); ECF subfamily RNA polymerase sigma-24 factor	1915404..1915967	Alkaliphilus metalliredigens QYMF	5311869
YP_001319628.1	CDS	Amet_1799	NC_009633.1	1915985	1916707	D	KEGG: dsy:DSY2643 hypothetical protein; hypothetical protein	1915985..1916707	Alkaliphilus metalliredigens QYMF	5311870
YP_001319629.1	CDS	Amet_1800	NC_009633.1	1917129	1917695	D	hypothetical protein	1917129..1917695	Alkaliphilus metalliredigens QYMF	5311871
YP_001319630.1	CDS	Amet_1801	NC_009633.1	1918054	1918554	D	hypothetical protein	1918054..1918554	Alkaliphilus metalliredigens QYMF	5311872
YP_001319631.1	CDS	Amet_1802	NC_009633.1	1918846	1919409	D	TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: ctc:CTC00553 RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 factor	1918846..1919409	Alkaliphilus metalliredigens QYMF	5311873
YP_001319632.1	CDS	Amet_1803	NC_009633.1	1919427	1920161	D	hypothetical protein	1919427..1920161	Alkaliphilus metalliredigens QYMF	5311874
YP_001319633.1	CDS	Amet_1804	NC_009633.1	1920269	1920400	D	hypothetical protein	1920269..1920400	Alkaliphilus metalliredigens QYMF	5311875
YP_001319634.1	CDS	Amet_1805	NC_009633.1	1920455	1921027	D	hypothetical protein	1920455..1921027	Alkaliphilus metalliredigens QYMF	5311876
YP_001319635.1	CDS	Amet_1806	NC_009633.1	1921153	1921425	D	hypothetical protein	1921153..1921425	Alkaliphilus metalliredigens QYMF	5311877
YP_001319636.1	CDS	Amet_1807	NC_009633.1	1921547	1921987	D	hypothetical protein	1921547..1921987	Alkaliphilus metalliredigens QYMF	5311878
YP_001319637.1	CDS	Amet_1808	NC_009633.1	1922051	1922716	D	hypothetical protein	1922051..1922716	Alkaliphilus metalliredigens QYMF	5311879
YP_001319638.1	CDS	Amet_1809	NC_009633.1	1922754	1923380	D	hypothetical protein	1922754..1923380	Alkaliphilus metalliredigens QYMF	5311880
YP_001319639.1	CDS	Amet_1810	NC_009633.1	1923469	1923900	D	hypothetical protein	1923469..1923900	Alkaliphilus metalliredigens QYMF	5311881
YP_001319640.1	CDS	Amet_1811	NC_009633.1	1924252	1924476	D	hypothetical protein	1924252..1924476	Alkaliphilus metalliredigens QYMF	5311882
YP_001319641.1	CDS	Amet_1812	NC_009633.1	1924625	1925773	D	PFAM: peptidase M23B; KEGG: sao:SAOUHSC_02464 hypothetical protein; peptidase M23B	1924625..1925773	Alkaliphilus metalliredigens QYMF	5311883
YP_001319642.1	CDS	Amet_1813	NC_009633.1	1926089	1926304	D	hypothetical protein	1926089..1926304	Alkaliphilus metalliredigens QYMF	5311884
YP_001319643.1	CDS	Amet_1814	NC_009633.1	1926357	1926536	D	hypothetical protein	1926357..1926536	Alkaliphilus metalliredigens QYMF	5311885
YP_001319644.1	CDS	Amet_1815	NC_009633.1	1926624	1926959	D	hypothetical protein	1926624..1926959	Alkaliphilus metalliredigens QYMF	5311886
YP_001319645.1	CDS	Amet_1816	NC_009633.1	1927011	1927376	D	KEGG: ctc:CTC00651 hypothetical protein; hypothetical protein	1927011..1927376	Alkaliphilus metalliredigens QYMF	5311887
YP_001319646.1	CDS	Amet_1817	NC_009633.1	1927466	1928773	D	hypothetical protein	1927466..1928773	Alkaliphilus metalliredigens QYMF	5311888
YP_001319647.1	CDS	Amet_1818	NC_009633.1	1929355	1929708	D	hypothetical protein	1929355..1929708	Alkaliphilus metalliredigens QYMF	5311889
YP_001319648.1	CDS	Amet_1819	NC_009633.1	1930358	1930633	D	hypothetical protein	1930358..1930633	Alkaliphilus metalliredigens QYMF	5311890
YP_001319649.1	CDS	Amet_1820	NC_009633.1	1930667	1931236	D	hypothetical protein	1930667..1931236	Alkaliphilus metalliredigens QYMF	5311891
YP_001319650.1	CDS	Amet_1821	NC_009633.1	1931321	1931722	D	KEGG: bca:BCE_2809 hypothetical protein; hypothetical protein	1931321..1931722	Alkaliphilus metalliredigens QYMF	5311892
YP_001319651.1	CDS	Amet_1822	NC_009633.1	1931824	1931964	D	hypothetical protein	1931824..1931964	Alkaliphilus metalliredigens QYMF	5311893
YP_001319652.1	CDS	Amet_1823	NC_009633.1	1932044	1932601	D	hypothetical protein	1932044..1932601	Alkaliphilus metalliredigens QYMF	5311894
YP_001319653.1	CDS	Amet_1824	NC_009633.1	1932770	1933387	D	hypothetical protein	1932770..1933387	Alkaliphilus metalliredigens QYMF	5311895
YP_001319654.1	CDS	Amet_1825	NC_009633.1	1933498	1933743	D	hypothetical protein	1933498..1933743	Alkaliphilus metalliredigens QYMF	5311896
YP_001319655.1	CDS	Amet_1826	NC_009633.1	1933937	1934401	D	hypothetical protein	1933937..1934401	Alkaliphilus metalliredigens QYMF	5311897
YP_001319656.1	CDS	Amet_1827	NC_009633.1	1935690	1936055	D	PFAM: regulatory protein, ArsR; KEGG: cth:Cthe_1112 transcriptional regulator, ArsR family; regulatory protein ArsR	1935690..1936055	Alkaliphilus metalliredigens QYMF	5311898
YP_001319657.1	CDS	Amet_1828	NC_009633.1	1936132	1937205	D	TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: cth:Cthe_1111 bile acid:sodium symporter; arsenical-resistance protein	1936132..1937205	Alkaliphilus metalliredigens QYMF	5311899
YP_001319658.1	CDS	Amet_1829	NC_009633.1	1937246	1937545	D	PFAM: Arsenical resistance operon trans-acting repressor ArsD; KEGG: llm:llmg_1247 arsenical resistance operon trans-acting repressor ArsD; arsenical resistance operon trans-acting repressor ArsD	1937246..1937545	Alkaliphilus metalliredigens QYMF	5311900
YP_001319659.1	CDS	Amet_1830	NC_009633.1	1937558	1938445	D	TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase; KEGG: hwa:HQ2609A probable arsenite efflux ATPase; arsenite-activated ATPase ArsA	1937558..1938445	Alkaliphilus metalliredigens QYMF	5311901
YP_001319660.1	CDS	Amet_1831	NC_009633.1	1938438	1939328	D	TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase; KEGG: hal:VNG7123 arsenite-transporting ATPase; arsenite-activated ATPase ArsA	1938438..1939328	Alkaliphilus metalliredigens QYMF	5311902
YP_001319661.1	CDS	Amet_1832	NC_009633.1	1939453	1939680	D	hypothetical protein	1939453..1939680	Alkaliphilus metalliredigens QYMF	5311903
YP_001319662.1	CDS	Amet_1833	NC_009633.1	1939857	1940573	D	PFAM: glutamine amidotransferase class-I; peptidase C26; KEGG: cac:CAC1764 predicted glutamine amidotransferase; peptidase C26	1939857..1940573	Alkaliphilus metalliredigens QYMF	5311904
YP_001319663.1	CDS	Amet_1834	NC_009633.1	1940595	1941521	D	PFAM: permease; KEGG: mhu:Mhun_0864 permease; permease	1940595..1941521	Alkaliphilus metalliredigens QYMF	5311905
YP_001319664.1	CDS	Amet_1835	NC_009633.1	1941769	1941945	R	hypothetical protein	complement(1941769..1941945)	Alkaliphilus metalliredigens QYMF	5311906
YP_001319665.1	CDS	Amet_1836	NC_009633.1	1942089	1942256	R	hypothetical protein	complement(1942089..1942256)	Alkaliphilus metalliredigens QYMF	5311907
YP_001319666.1	CDS	Amet_1837	NC_009633.1	1942478	1942816	R	PFAM: regulatory protein, ArsR; KEGG: sfu:Sfum_2884 transcriptional regulator, ArsR family; regulatory protein ArsR	complement(1942478..1942816)	Alkaliphilus metalliredigens QYMF	5311908
YP_001319667.1	CDS	Amet_1838	NC_009633.1	1943119	1944258	D	TIGRFAM: cysteine desulfurase family protein; PFAM: aminotransferase, class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mta:Moth_2214 cysteine desulphurase related, unknown function; cysteine desulfurase	1943119..1944258	Alkaliphilus metalliredigens QYMF	5311909
YP_001319668.1	CDS	Amet_1839	NC_009633.1	1944289	1944822	D	PFAM: Fe-S cluster domain protein; KEGG: mta:Moth_2213 putative Fe-S cluster; Fe-S cluster domain-containing protein	1944289..1944822	Alkaliphilus metalliredigens QYMF	5311910
YP_001319669.1	CDS	Amet_1840	NC_009633.1	1944864	1945544	D	PFAM: permease; KEGG: mhu:Mhun_0862 permease; permease	1944864..1945544	Alkaliphilus metalliredigens QYMF	5311911
YP_001319670.1	CDS	Amet_1841	NC_009633.1	1945586	1945930	D	PFAM: regulatory protein, ArsR; KEGG: dsy:DSY4679 hypothetical protein; regulatory protein ArsR	1945586..1945930	Alkaliphilus metalliredigens QYMF	5311912
YP_001319671.1	CDS	Amet_1842	NC_009633.1	1946364	1946846	R	hypothetical protein	complement(1946364..1946846)	Alkaliphilus metalliredigens QYMF	5311913
YP_001319672.1	CDS	Amet_1843	NC_009633.1	1947425	1947685	R	hypothetical protein	complement(1947425..1947685)	Alkaliphilus metalliredigens QYMF	5311914
YP_001319673.1	CDS	Amet_1844	NC_009633.1	1947731	1947874	R	hypothetical protein	complement(1947731..1947874)	Alkaliphilus metalliredigens QYMF	5311915
YP_001319674.1	CDS	Amet_1845	NC_009633.1	1948221	1948586	D	KEGG: dsy:DSY0341 hypothetical protein; hypothetical protein	1948221..1948586	Alkaliphilus metalliredigens QYMF	5311916
YP_001319675.1	CDS	Amet_1846	NC_009633.1	1948652	1949587	D	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dsy:DSY0342 hypothetical protein; ABC transporter-like protein	1948652..1949587	Alkaliphilus metalliredigens QYMF	5311917
YP_001319676.1	CDS	Amet_1847	NC_009633.1	1949622	1950305	D	KEGG: dsy:DSY0343 hypothetical protein; hypothetical protein	1949622..1950305	Alkaliphilus metalliredigens QYMF	5311918
YP_001319677.1	CDS	Amet_1848	NC_009633.1	1950305	1951003	D	hypothetical protein	1950305..1951003	Alkaliphilus metalliredigens QYMF	5311919
YP_001319678.1	CDS	Amet_1849	NC_009633.1	1951473	1951856	D	hypothetical protein	1951473..1951856	Alkaliphilus metalliredigens QYMF	5311920
YP_001319679.1	CDS	Amet_1851	NC_009633.1	1952894	1953406	D	TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: sth:STH2043 RNA polymerase ECF-type sigma factor; ECF subfamily RNA polymerase sigma-24 factor	1952894..1953406	Alkaliphilus metalliredigens QYMF	5311922
YP_001319680.1	CDS	Amet_1852	NC_009633.1	1953378	1954094	D	hypothetical protein	1953378..1954094	Alkaliphilus metalliredigens QYMF	5311923
YP_001319681.1	CDS	Amet_1853	NC_009633.1	1954363	1954515	R	hypothetical protein	complement(1954363..1954515)	Alkaliphilus metalliredigens QYMF	5311924
YP_001319682.1	CDS	Amet_1854	NC_009633.1	1954645	1954971	R	hypothetical protein	complement(1954645..1954971)	Alkaliphilus metalliredigens QYMF	5311925
YP_001319683.1	CDS	Amet_1855	NC_009633.1	1954996	1956474	D	PFAM: KWG Leptospira repeat protein; KEGG: ter:Tery_2057 KWG Leptospira; hypothetical protein	1954996..1956474	Alkaliphilus metalliredigens QYMF	5311926
YP_001319684.1	CDS	Amet_1856	NC_009633.1	1956573	1956752	D	ECF subfamily RNA polymerase sigma-24 factor	1956573..1956752	Alkaliphilus metalliredigens QYMF	5311927
YP_001319685.1	CDS	Amet_1857	NC_009633.1	1956899	1957186	D	hypothetical protein	1956899..1957186	Alkaliphilus metalliredigens QYMF	5311928
YP_001319686.1	CDS	Amet_1858	NC_009633.1	1957473	1957721	D	hypothetical protein	1957473..1957721	Alkaliphilus metalliredigens QYMF	5311929
YP_001319687.1	CDS	Amet_1859	NC_009633.1	1957836	1958012	D	hypothetical protein	1957836..1958012	Alkaliphilus metalliredigens QYMF	5311930
YP_001319688.1	CDS	Amet_1860	NC_009633.1	1958309	1958881	D	hypothetical protein	1958309..1958881	Alkaliphilus metalliredigens QYMF	5311931
YP_001319689.1	CDS	Amet_1861	NC_009633.1	1959079	1959801	D	PFAM: beta-lactamase domain protein; KEGG: afu:AF1748 hypothetical protein; beta-lactamase domain-containing protein	1959079..1959801	Alkaliphilus metalliredigens QYMF	5311932
YP_001319690.1	CDS	Amet_1863	NC_009633.1	1960404	1960949	D	PFAM: nitroreductase; KEGG: cac:CAC1418 nitroreductase family protein; nitroreductase	1960404..1960949	Alkaliphilus metalliredigens QYMF	5311934
YP_001319691.1	CDS	Amet_1866	NC_009633.1	1962047	1962493	D	hypothetical protein	1962047..1962493	Alkaliphilus metalliredigens QYMF	5311937
YP_001319692.1	CDS	Amet_1867	NC_009633.1	1963079	1963387	D	hypothetical protein	1963079..1963387	Alkaliphilus metalliredigens QYMF	5311938
YP_001319693.1	CDS	Amet_1868	NC_009633.1	1963813	1963950	D	hypothetical protein	1963813..1963950	Alkaliphilus metalliredigens QYMF	5311939
YP_001319694.1	CDS	Amet_1869	NC_009633.1	1964058	1964342	D	PFAM: Excinuclease ABC, C subunit domain protein; KEGG: cph:Cpha266_2317 excinuclease ABC, C subunit domain protein; excinuclease ABC subunit C	1964058..1964342	Alkaliphilus metalliredigens QYMF	5311940
YP_001319695.1	CDS	Amet_1870	NC_009633.1	1964741	1965409	D	hypothetical protein	1964741..1965409	Alkaliphilus metalliredigens QYMF	5311941
YP_001319696.1	CDS	Amet_1871	NC_009633.1	1965849	1966079	D	hypothetical protein	1965849..1966079	Alkaliphilus metalliredigens QYMF	5311942
YP_001319697.1	CDS	Amet_1872	NC_009633.1	1966413	1966787	D	hypothetical protein	1966413..1966787	Alkaliphilus metalliredigens QYMF	5311943
YP_001319698.1	CDS	Amet_1873	NC_009633.1	1966928	1967353	D	PFAM: regulatory protein, MarR; regulatory protein, ArsR; KEGG: bld:BLi00380 hypothetical protein; MarR family transcriptional regulator	1966928..1967353	Alkaliphilus metalliredigens QYMF	5311944
YP_001319699.1	CDS	Amet_1874	NC_009633.1	1967341	1967670	D	KEGG: bld:BLi00381 hypothetical protein; hypothetical protein	1967341..1967670	Alkaliphilus metalliredigens QYMF	5311945
YP_001319700.1	CDS	Amet_1876	NC_009633.1	1968105	1968959	D	PFAM: helix-turn-helix protein RpiR; KEGG: tte:TTE1343 transcriptional regulator; RpiR family transcriptional regulator	1968105..1968959	Alkaliphilus metalliredigens QYMF	5311947
YP_001319701.1	CDS	Amet_1877	NC_009633.1	1969555	1970502	D	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: fnu:FN0397 dipeptide transport system permease protein dppB; binding-protein-dependent transport system inner membrane protein	1969555..1970502	Alkaliphilus metalliredigens QYMF	5311948
YP_001319702.1	CDS	Amet_1878	NC_009633.1	1970529	1971491	D	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: fnu:FN0398 dipeptide transport system permease protein dppC; binding-protein-dependent transport system inner membrane protein	1970529..1971491	Alkaliphilus metalliredigens QYMF	5311949
YP_001319703.1	CDS	Amet_1879	NC_009633.1	1971507	1972520	D	TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; KEGG: sth:STH2824 oligopeptide ABC transporter ATP-binding protein; oligopeptide/dipeptide ABC transporter ATPase	1971507..1972520	Alkaliphilus metalliredigens QYMF	5311950
YP_001319704.1	CDS	Amet_1880	NC_009633.1	1972501	1973454	D	TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; KEGG: fnu:FN0400 dipeptide transport ATP-binding protein dppF; oligopeptide/dipeptide ABC transporter ATPase	1972501..1973454	Alkaliphilus metalliredigens QYMF	5311951
YP_001319705.1	CDS	Amet_1881	NC_009633.1	1973538	1975085	D	PFAM: extracellular solute-binding protein, family 5; KEGG: oih:OB3071 oligopeptide ABC transporter oligopeptide-binding protein; extracellular solute-binding protein	1973538..1975085	Alkaliphilus metalliredigens QYMF	5311952
YP_001319706.1	CDS	Amet_1882	NC_009633.1	1975200	1976165	D	PFAM: peptidase M19, renal dipeptidase; KEGG: tte:TTE2129 Zn-dependent dipeptidase, microsomal dipeptidase homolog; peptidase M19	1975200..1976165	Alkaliphilus metalliredigens QYMF	5311953
YP_001319707.1	CDS	Amet_1883	NC_009633.1	1976250	1977665	D	PFAM: amidohydrolase; KEGG: vvy:VVA1170 D-glutamate deacylase; amidohydrolase	1976250..1977665	Alkaliphilus metalliredigens QYMF	5311954
YP_001319708.1	CDS	Amet_1884	NC_009633.1	1977851	1978921	D	PFAM: peptidase S58, DmpA; KEGG: tte:TTE1085 L-aminopeptidase/D-esterase; peptidase S58, DmpA	1977851..1978921	Alkaliphilus metalliredigens QYMF	5311955
YP_001319709.1	CDS	Amet_1885	NC_009633.1	1979551	1980528	D	PFAM: Bile acid:sodium symporter; KEGG: btk:BT9727_1749 arsenical-resistance protein; possible sodium/bile acid symporter family; bile acid:sodium symporter	1979551..1980528	Alkaliphilus metalliredigens QYMF	5311956
YP_001319710.1	CDS	Amet_1886	NC_009633.1	1980795	1982204	D	PFAM: cell wall hydrolase/autolysin; copper amine oxidase domain protein; KEGG: cth:Cthe_0185 cell wall hydrolase/autolysin; N-acetylmuramoyl-L-alanine amidase	1980795..1982204	Alkaliphilus metalliredigens QYMF	5311957
YP_001319711.1	CDS	Amet_1887	NC_009633.1	1982447	1984099	D	PFAM: peptidase S41; KEGG: tte:TTE0406 hypothetical protein; peptidase S41	1982447..1984099	Alkaliphilus metalliredigens QYMF	5311958
YP_001319712.1	CDS	Amet_1888	NC_009633.1	1984205	1985569	D	PFAM: transposase, IS4 family protein; KEGG: wol:WD0563 transposase, IS4 family; transposase, IS4 family protein	1984205..1985569	Alkaliphilus metalliredigens QYMF	5311959
YP_001319713.1	CDS	Amet_1889	NC_009633.1	1985801	1985935	D	hypothetical protein	1985801..1985935	Alkaliphilus metalliredigens QYMF	5311960
YP_001319714.1	CDS	Amet_1890	NC_009633.1	1986088	1986582	D	hypothetical protein	1986088..1986582	Alkaliphilus metalliredigens QYMF	5311961
YP_001319715.1	CDS	Amet_1891	NC_009633.1	1987238	1987762	D	TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: ctc:CTC01433 putative RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 factor	1987238..1987762	Alkaliphilus metalliredigens QYMF	5311962
YP_001319716.1	CDS	Amet_1892	NC_009633.1	1987969	1988334	D	hypothetical protein	1987969..1988334	Alkaliphilus metalliredigens QYMF	5311963
YP_001319717.1	CDS	Amet_1893	NC_009633.1	1988525	1988677	D	hypothetical protein	1988525..1988677	Alkaliphilus metalliredigens QYMF	5311964
YP_001319718.1	CDS	Amet_1894	NC_009633.1	1988883	1989629	D	KEGG: btl:BALH_1554 hypothetical protein; hypothetical protein	1988883..1989629	Alkaliphilus metalliredigens QYMF	5311965
YP_001319719.1	CDS	Amet_1895	NC_009633.1	1989666	1990016	D	KEGG: dsy:DSY4235 hypothetical protein; hypothetical protein	1989666..1990016	Alkaliphilus metalliredigens QYMF	5311966
YP_001319720.1	CDS	Amet_1896	NC_009633.1	1990145	1990690	D	KEGG: mxa:MXAN_1647 hypothetical protein; hypothetical protein	1990145..1990690	Alkaliphilus metalliredigens QYMF	5311967
YP_001319721.1	CDS	Amet_1897	NC_009633.1	1991296	1991973	D	PFAM: manganese and iron superoxide dismutase; KEGG: gka:GK2457 manganese superoxide dismutase; superoxide dismutase	1991296..1991973	Alkaliphilus metalliredigens QYMF	5311968
YP_001319722.1	CDS	Amet_1899	NC_009633.1	1992564	1993754	D	PFAM: ATPase associated with various cellular activities, AAA_5; KEGG: dsy:DSY3593 hypothetical protein; ATPase	1992564..1993754	Alkaliphilus metalliredigens QYMF	5311970
YP_001319723.1	CDS	Amet_1900	NC_009633.1	1993751	1994602	D	KEGG: dsy:DSY3593 hypothetical protein; hypothetical protein	1993751..1994602	Alkaliphilus metalliredigens QYMF	5311971
YP_001319724.1	CDS	Amet_1901	NC_009633.1	1994637	1995230	D	PFAM: helix-turn-helix domain protein; KEGG: dsy:DSY3594 hypothetical protein; XRE family transcriptional regulator	1994637..1995230	Alkaliphilus metalliredigens QYMF	5311972
YP_001319725.1	CDS	Amet_1902	NC_009633.1	1995887	1996519	D	KEGG: cth:Cthe_1678 hypothetical protein; chloramphenicol O-acetyltransferase	1995887..1996519	Alkaliphilus metalliredigens QYMF	5311973
YP_001319726.1	CDS	Amet_1903	NC_009633.1	1997432	1998895	D	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: spa:M6_Spy1165 macrolide-specific ABC-type efflux carrier; ABC transporter-like protein	1997432..1998895	Alkaliphilus metalliredigens QYMF	5311974
YP_001319727.1	CDS	Amet_1904	NC_009633.1	1998936	2000210	D	PFAM: major facilitator superfamily MFS_1; KEGG: pab:PAB0724 multidrug resistance protein (multidrug-EF flux transporter); major facilitator superfamily transporter	1998936..2000210	Alkaliphilus metalliredigens QYMF	5311975
YP_001319728.1	CDS	Amet_1905	NC_009633.1	2000286	2001182	D	PFAM: aminoglycoside phosphotransferase; KEGG: btk:BT9727_1445 possible macrolide 2-phosphotransferase; aminoglycoside phosphotransferase	2000286..2001182	Alkaliphilus metalliredigens QYMF	5311976
YP_001319729.1	CDS	Amet_1906	NC_009633.1	2001320	2001451	R	hypothetical protein	complement(2001320..2001451)	Alkaliphilus metalliredigens QYMF	5311977
YP_001319730.1	CDS	Amet_1907	NC_009633.1	2002075	2002845	R	PFAM: alpha/beta hydrolase fold; Ndr family protein; KEGG: chu:CHU_2307 hydrolase, alpha/beta fold family; alpha/beta hydrolase fold protein	complement(2002075..2002845)	Alkaliphilus metalliredigens QYMF	5311978
YP_001319731.1	CDS	Amet_1908	NC_009633.1	2002859	2003575	R	PFAM: regulatory protein, TetR; KEGG: sth:STH2336 putative transcriptional regulator; TetR family transcriptional regulator	complement(2002859..2003575)	Alkaliphilus metalliredigens QYMF	5311979
YP_001319732.1	CDS	Amet_1909	NC_009633.1	2004045	2005124	D	hypothetical protein	2004045..2005124	Alkaliphilus metalliredigens QYMF	5311980
YP_001319733.1	CDS	Amet_1910	NC_009633.1	2005243	2006703	R	KEGG: ctc:CTC00917 transposase; transposase	complement(2005243..2006703)	Alkaliphilus metalliredigens QYMF	5311981
YP_001319734.1	CDS	Amet_1911	NC_009633.1	2006869	2007666	D	PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: bha:BH0851 transcriptional regulator (AraC/XylS family); helix-turn-helix domain-containing protein	2006869..2007666	Alkaliphilus metalliredigens QYMF	5311982
YP_001319735.1	CDS	Amet_1912	NC_009633.1	2007781	2008668	D	PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: cac:CAC3467 uncharacterized conserved protein, PhnB family; 3-demethylubiquinone-9 3-methyltransferase	2007781..2008668	Alkaliphilus metalliredigens QYMF	5311983
YP_001319736.1	CDS	Amet_1913	NC_009633.1	2008933	2009526	D	PFAM: regulatory protein, TetR; KEGG: dsy:DSY4218 hypothetical protein; TetR family transcriptional regulator	2008933..2009526	Alkaliphilus metalliredigens QYMF	5311984
YP_001319737.1	CDS	Amet_1914	NC_009633.1	2009596	2012202	D	PFAM: pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising protein, mobile region; KEGG: mva:Mvan_2632 pyruvate, water dikinase; pyruvate phosphate dikinase	2009596..2012202	Alkaliphilus metalliredigens QYMF	5311985
YP_001319738.1	CDS	Amet_1915	NC_009633.1	2012447	2013121	D	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: dsy:DSY3627 hypothetical protein; two component transcriptional regulator	2012447..2013121	Alkaliphilus metalliredigens QYMF	5311986
YP_001319739.1	CDS	Amet_1916	NC_009633.1	2013118	2014854	D	PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; KEGG: dsy:DSY3626 hypothetical protein; integral membrane sensor signal transduction histidine kinase	2013118..2014854	Alkaliphilus metalliredigens QYMF	5311987
YP_001319740.1	CDS	Amet_1917	NC_009633.1	2014955	2015629	D	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sak:SAK_0174 DNA-binding response regulator; two component transcriptional regulator	2014955..2015629	Alkaliphilus metalliredigens QYMF	5311988
YP_001319741.1	CDS	Amet_1918	NC_009633.1	2015626	2016675	D	PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; KEGG: bca:BCE_2042 sensor histidine kinase; integral membrane sensor signal transduction histidine kinase	2015626..2016675	Alkaliphilus metalliredigens QYMF	5311989
YP_001319742.1	CDS	Amet_1919	NC_009633.1	2017003	2017950	D	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mac:MA0853 bacitracin ABC transporter, ATP-binding protein; ABC transporter-like protein	2017003..2017950	Alkaliphilus metalliredigens QYMF	5311990
YP_001319743.1	CDS	Amet_1920	NC_009633.1	2017950	2018666	D	KEGG: mac:MA0852 bacitracin ABC transporter, permease protein; bacitracin ABC transporter permease	2017950..2018666	Alkaliphilus metalliredigens QYMF	5311991
YP_001319744.1	CDS	Amet_1921	NC_009633.1	2019408	2020172	R	PFAM: helix-turn-helix domain protein; bacteriophage CI repressor; KEGG: ecv:APECO1_376 putative repressor protein encoded within prophage CP-933O; XRE family plasmid maintenance system antidote protein	complement(2019408..2020172)	Alkaliphilus metalliredigens QYMF	5311992
YP_001319745.1	CDS	Amet_1922	NC_009633.1	2020480	2020659	D	hypothetical protein	2020480..2020659	Alkaliphilus metalliredigens QYMF	5311993
YP_001319746.1	CDS	Amet_1923	NC_009633.1	2021005	2021211	D	hypothetical protein	2021005..2021211	Alkaliphilus metalliredigens QYMF	5311994
YP_001319747.1	CDS	Amet_1924	NC_009633.1	2021186	2021656	D	hypothetical protein	2021186..2021656	Alkaliphilus metalliredigens QYMF	5311995
YP_001319748.1	CDS	Amet_1925	NC_009633.1	2021681	2021905	D	KEGG: tte:TTE2173 hypothetical protein; hypothetical protein	2021681..2021905	Alkaliphilus metalliredigens QYMF	5311996
YP_001319749.1	CDS	Amet_1927	NC_009633.1	2024136	2025059	D	KEGG: cjr:CJE0269 bacteriophage DNA transposition protein B, putative; hypothetical protein	2024136..2025059	Alkaliphilus metalliredigens QYMF	5311998
YP_001319750.1	CDS	Amet_1928	NC_009633.1	2025059	2025313	D	hypothetical protein	2025059..2025313	Alkaliphilus metalliredigens QYMF	5311999
YP_001319751.1	CDS	Amet_1929	NC_009633.1	2025315	2025542	D	hypothetical protein	2025315..2025542	Alkaliphilus metalliredigens QYMF	5312000
YP_001319752.1	CDS	Amet_1930	NC_009633.1	2025520	2026275	D	hypothetical protein	2025520..2026275	Alkaliphilus metalliredigens QYMF	5312001
YP_001319753.1	CDS	Amet_1931	NC_009633.1	2026277	2026516	D	PFAM: SpoVT/AbrB domain protein; KEGG: swo:Swol_0047 transcription regulator AbrB; transcriptional regulator/antitoxin MazE	2026277..2026516	Alkaliphilus metalliredigens QYMF	5312002
YP_001319754.1	CDS	Amet_1932	NC_009633.1	2026509	2027162	D	hypothetical protein	2026509..2027162	Alkaliphilus metalliredigens QYMF	5312003
YP_001319755.1	CDS	Amet_1933	NC_009633.1	2027212	2027640	D	hypothetical protein	2027212..2027640	Alkaliphilus metalliredigens QYMF	5312004
YP_001319756.1	CDS	Amet_1934	NC_009633.1	2027633	2027857	D	hypothetical protein	2027633..2027857	Alkaliphilus metalliredigens QYMF	5312005
YP_001319757.1	CDS	Amet_1935	NC_009633.1	2027928	2028089	D	hypothetical protein	2027928..2028089	Alkaliphilus metalliredigens QYMF	5312006
YP_001319758.1	CDS	Amet_1936	NC_009633.1	2028103	2028750	D	TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; KEGG: cpr:CPR_1733 RNA polymerase sigma-E factor; FliA/WhiG family RNA polymerase sigma factor	2028103..2028750	Alkaliphilus metalliredigens QYMF	5312007
YP_001319759.1	CDS	Amet_1937	NC_009633.1	2028757	2029158	D	KEGG: pol:Bpro_3769 hypothetical protein; hypothetical protein	2028757..2029158	Alkaliphilus metalliredigens QYMF	5312008
YP_001319760.1	CDS	Amet_1938	NC_009633.1	2029452	2029763	D	hypothetical protein	2029452..2029763	Alkaliphilus metalliredigens QYMF	5312009
YP_001319761.1	CDS	Amet_1939	NC_009633.1	2029807	2030145	D	hypothetical protein	2029807..2030145	Alkaliphilus metalliredigens QYMF	5312010
YP_001319762.1	CDS	Amet_1940	NC_009633.1	2030176	2030397	D	hypothetical protein	2030176..2030397	Alkaliphilus metalliredigens QYMF	5312011
YP_001319763.1	CDS	Amet_1941	NC_009633.1	2030423	2030548	D	hypothetical protein	2030423..2030548	Alkaliphilus metalliredigens QYMF	5312012
YP_001319764.1	CDS	Amet_1942	NC_009633.1	2030549	2030785	D	hypothetical protein	2030549..2030785	Alkaliphilus metalliredigens QYMF	5312013
YP_001319765.1	CDS	Amet_1943	NC_009633.1	2031026	2031502	D	PFAM: 3D domain protein; KEGG: bsu:BG13521 similar to cell wall-binding protein; hypothetical protein	2031026..2031502	Alkaliphilus metalliredigens QYMF	5312014
YP_001319766.1	CDS	Amet_1944	NC_009633.1	2031532	2032242	D	KEGG: ssa:SSA_0424 exopolysaccharide biosynthesis protein, putative; related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase-like protein; exopolysaccharide biosynthesis protein	2031532..2032242	Alkaliphilus metalliredigens QYMF	5312015
YP_001319767.1	CDS	Amet_1945	NC_009633.1	2032362	2033039	D	PFAM: cell wall hydrolase/autolysin; KEGG: bld:BLi01974 N-acetylmuramoyl-L-alanine amidase cwlL precursor (Cell wall hydrolase) (Autolysin); RBL04154; cell wall hydrolase/autolysin	2032362..2033039	Alkaliphilus metalliredigens QYMF	5312016
YP_001319768.1	CDS	Amet_1946	NC_009633.1	2033093	2033407	D	hypothetical protein	2033093..2033407	Alkaliphilus metalliredigens QYMF	5312017
YP_001319769.1	CDS	Amet_1947	NC_009633.1	2033518	2034057	D	hypothetical protein	2033518..2034057	Alkaliphilus metalliredigens QYMF	5312018
YP_001319770.1	CDS	Amet_1948	NC_009633.1	2034059	2034352	D	hypothetical protein	2034059..2034352	Alkaliphilus metalliredigens QYMF	5312019
YP_001319771.1	CDS	Amet_1949	NC_009633.1	2034354	2034647	D	hypothetical protein	2034354..2034647	Alkaliphilus metalliredigens QYMF	5312020
YP_001319772.1	CDS	Amet_1950	NC_009633.1	2034647	2035213	D	KEGG: mfa:Mfla_2702 hypothetical protein; hypothetical protein	2034647..2035213	Alkaliphilus metalliredigens QYMF	5312021
YP_001319773.1	CDS	Amet_1951	NC_009633.1	2035227	2035715	D	PFAM: transcription antitermination protein NusG; SMART: NGN domain protein; KEGG: tte:TTE0730 Transcription antiterminator; NusG antitermination factor	2035227..2035715	Alkaliphilus metalliredigens QYMF	5312022
YP_001319774.1	CDS	Amet_1952	NC_009633.1	2035972	2037429	D	TIGRFAM: phage uncharacterized protein; KEGG: bha:BH3533 hypothetical protein; phage protein	2035972..2037429	Alkaliphilus metalliredigens QYMF	5312023
YP_001319775.1	CDS	Amet_1953	NC_009633.1	2037447	2038796	D	TIGRFAM: phage-associated protein, HI1409 family; KEGG: efa:EF1456 conserved hypothetical protein TIGR01555; phage-associated protein	2037447..2038796	Alkaliphilus metalliredigens QYMF	5312024
YP_001319776.1	CDS	Amet_1954	NC_009633.1	2038789	2039571	D	TIGRFAM: phage putative head morphogenesis protein, SPP1 gp7 family; PFAM: phage putative head morphogenesis protein, SPP1 gp7; KEGG: efa:EF1457 minor head protein; SPP1 family phage head morphogenesis protein	2038789..2039571	Alkaliphilus metalliredigens QYMF	5312025
YP_001319777.1	CDS	Amet_1955	NC_009633.1	2039585	2040688	D	KEGG: lin:lin1728 hypothetical protein; hypothetical protein	2039585..2040688	Alkaliphilus metalliredigens QYMF	5312026
YP_001319778.1	CDS	Amet_1956	NC_009633.1	2040704	2041204	D	KEGG: efa:EF1462 hypothetical protein; hypothetical protein	2040704..2041204	Alkaliphilus metalliredigens QYMF	5312027
YP_001319779.1	CDS	Amet_1957	NC_009633.1	2041227	2042141	D	KEGG: lin:lin1726 hypothetical protein; hypothetical protein	2041227..2042141	Alkaliphilus metalliredigens QYMF	5312028
YP_001319780.1	CDS	Amet_1958	NC_009633.1	2042157	2042489	D	hypothetical protein	2042157..2042489	Alkaliphilus metalliredigens QYMF	5312029
YP_001319781.1	CDS	Amet_1959	NC_009633.1	2042492	2042824	D	KEGG: lin:lin1724 hypothetical protein; hypothetical protein	2042492..2042824	Alkaliphilus metalliredigens QYMF	5312030
YP_001319782.1	CDS	Amet_1960	NC_009633.1	2042837	2043439	D	KEGG: lin:lin1723 hypothetical protein; hypothetical protein	2042837..2043439	Alkaliphilus metalliredigens QYMF	5312031
YP_001319783.1	CDS	Amet_1961	NC_009633.1	2043436	2043798	D	hypothetical protein	2043436..2043798	Alkaliphilus metalliredigens QYMF	5312032
YP_001319784.1	CDS	Amet_1962	NC_009633.1	2043795	2044301	D	hypothetical protein	2043795..2044301	Alkaliphilus metalliredigens QYMF	5312033
YP_001319785.1	CDS	Amet_1963	NC_009633.1	2044313	2045317	D	KEGG: efa:EF1469 hypothetical protein; hypothetical protein	2044313..2045317	Alkaliphilus metalliredigens QYMF	5312034
YP_001319786.1	CDS	Amet_1964	NC_009633.1	2045329	2045733	D	KEGG: lin:lin1719 hypothetical protein; hypothetical protein	2045329..2045733	Alkaliphilus metalliredigens QYMF	5312035
YP_001319787.1	CDS	Amet_1965	NC_009633.1	2045789	2046043	D	hypothetical protein	2045789..2046043	Alkaliphilus metalliredigens QYMF	5312036
YP_001319788.1	CDS	Amet_1966	NC_009633.1	2046104	2046427	D	hypothetical protein	2046104..2046427	Alkaliphilus metalliredigens QYMF	5312037
YP_001319789.1	CDS	Amet_1967	NC_009633.1	2046536	2048293	D	TIGRFAM: phage tail tape measure protein, TP901 family; KEGG: dra:DRA0108 minor tail protein GP26-related protein; TP901 family phage tail tape measure protein	2046536..2048293	Alkaliphilus metalliredigens QYMF	5312038
YP_001319790.1	CDS	Amet_1968	NC_009633.1	2048306	2048896	D	KEGG: lin:lin1715 hypothetical protein; hypothetical protein	2048306..2048896	Alkaliphilus metalliredigens QYMF	5312039
YP_001319791.1	CDS	Amet_1969	NC_009633.1	2048893	2049222	D	KEGG: efa:EF1475 hypothetical protein; hypothetical protein	2048893..2049222	Alkaliphilus metalliredigens QYMF	5312040
YP_001319792.1	CDS	Amet_1970	NC_009633.1	2049209	2049985	D	KEGG: lin:lin1713 hypothetical protein; hypothetical protein	2049209..2049985	Alkaliphilus metalliredigens QYMF	5312041
YP_001319793.1	CDS	Amet_1971	NC_009633.1	2049982	2050278	D	hypothetical protein	2049982..2050278	Alkaliphilus metalliredigens QYMF	5312042
YP_001319794.1	CDS	Amet_1972	NC_009633.1	2050278	2050640	D	KEGG: efa:EF1478 hypothetical protein; hypothetical protein	2050278..2050640	Alkaliphilus metalliredigens QYMF	5312043
YP_001319795.1	CDS	Amet_1973	NC_009633.1	2050633	2051820	D	KEGG: efa:EF1479 hypothetical protein; hypothetical protein	2050633..2051820	Alkaliphilus metalliredigens QYMF	5312044
YP_001319796.1	CDS	Amet_1974	NC_009633.1	2051813	2052442	D	KEGG: lin:lin1709 hypothetical protein; hypothetical protein	2051813..2052442	Alkaliphilus metalliredigens QYMF	5312045
YP_001319797.1	CDS	Amet_1975	NC_009633.1	2052453	2053022	D	KEGG: lin:lin1708 hypothetical protein; hypothetical protein	2052453..2053022	Alkaliphilus metalliredigens QYMF	5312046
YP_001319798.1	CDS	Amet_1976	NC_009633.1	2053024	2053272	D	hypothetical protein	2053024..2053272	Alkaliphilus metalliredigens QYMF	5312047
YP_001319799.1	CDS	Amet_1977	NC_009633.1	2053265	2053399	D	hypothetical protein	2053265..2053399	Alkaliphilus metalliredigens QYMF	5312048
YP_001319800.1	CDS	Amet_1978	NC_009633.1	2053849	2054848	D	PFAM: phage integrase domain protein SAM domain protein; KEGG: dsy:DSY2171 hypothetical protein; phage integrase domain/SAM domain-containing protein	join(2053849..2054394,2054396..2054848)	Alkaliphilus metalliredigens QYMF	5312049
YP_001319801.1	CDS	Amet_1979	NC_009633.1	2055025	2055630	D	PFAM: lipolytic protein, G-D-S-L family; KEGG: dsy:DSY3617 hypothetical protein; GDSL family lipase	2055025..2055630	Alkaliphilus metalliredigens QYMF	5312050
YP_001319802.1	CDS	Amet_1980	NC_009633.1	2055644	2057050	D	PFAM: membrane bound O-acyl transferase, MBOAT family protein; KEGG: dsy:DSY3616 hypothetical protein; membrane bound O-acyl transferase, MBOAT family protein	2055644..2057050	Alkaliphilus metalliredigens QYMF	5312051
YP_001319803.1	CDS	Amet_1981	NC_009633.1	2057065	2057343	D	KEGG: dsy:DSY3615 hypothetical protein; hypothetical protein	2057065..2057343	Alkaliphilus metalliredigens QYMF	5312052
YP_001319804.1	CDS	Amet_1982	NC_009633.1	2057487	2058155	D	PFAM: cell wall hydrolase/autolysin; KEGG: cyb:CYB_0360 N-acetylmuramoyl-L-alanine amidase; cell wall hydrolase/autolysin	2057487..2058155	Alkaliphilus metalliredigens QYMF	5312053
YP_001319805.1	CDS	Amet_1983	NC_009633.1	2058531	2059088	D	PFAM: NADPH-dependent FMN reductase; KEGG: noc:Noc_0094 NADPH-dependent FMN reductase; NADPH-dependent FMN reductase	2058531..2059088	Alkaliphilus metalliredigens QYMF	5312054
YP_001319806.1	CDS	Amet_1984	NC_009633.1	2059358	2059585	R	KEGG: bat:BAS2654 hypothetical protein; hypothetical protein	complement(2059358..2059585)	Alkaliphilus metalliredigens QYMF	5312055
YP_001319807.1	CDS	Amet_1985	NC_009633.1	2060001	2060396	D	PFAM: Cupin 2, conserved barrel domain protein; KEGG: cno:NT01CX_0005 DNA-binding protein, putative; cupin	2060001..2060396	Alkaliphilus metalliredigens QYMF	5312056
YP_001319808.1	CDS	Amet_1986	NC_009633.1	2060511	2062880	D	PFAM: formate C-acetyltransferase glycine radical; pyruvate formate-lyase, PFL; KEGG: pca:Pcar_0937 putative formate acetyltransferase; formate C-acetyltransferase	2060511..2062880	Alkaliphilus metalliredigens QYMF	5312057
YP_001319809.1	CDS	Amet_1987	NC_009633.1	2062956	2063861	D	TIGRFAM: glycyl-radical enzyme activating protein family; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Radical SAM domain protein; KEGG: cno:NT01CX_1221 glycerol dehydratase activator; glycyl-radical activating family protein	2062956..2063861	Alkaliphilus metalliredigens QYMF	5312058
YP_001319810.1	CDS	Amet_1988	NC_009633.1	2064208	2065491	D	KEGG: cac:CAC2600 predicted membrane protein; membrane protein	2064208..2065491	Alkaliphilus metalliredigens QYMF	5312059
YP_001319811.1	CDS	Amet_1989	NC_009633.1	2065508	2066113	D	hypothetical protein	2065508..2066113	Alkaliphilus metalliredigens QYMF	5312060
YP_001319812.1	CDS	Amet_1990	NC_009633.1	2066096	2066278	R	hypothetical protein	complement(2066096..2066278)	Alkaliphilus metalliredigens QYMF	5312061
YP_001319813.1	CDS	Amet_1991	NC_009633.1	2066690	2067442	D	KEGG: dsy:DSY1520 hypothetical protein; hypothetical protein	2066690..2067442	Alkaliphilus metalliredigens QYMF	5312062
YP_001319814.1	CDS	Amet_1992	NC_009633.1	2067668	2068942	R	PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; KEGG: dsy:DSY3561 hypothetical protein; integral membrane sensor signal transduction histidine kinase	complement(2067668..2068942)	Alkaliphilus metalliredigens QYMF	5312063
YP_001319815.1	CDS	Amet_1993	NC_009633.1	2068943	2069620	R	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: swo:Swol_2177 response regulator receiver protein; two component transcriptional regulator	complement(2068943..2069620)	Alkaliphilus metalliredigens QYMF	5312064
YP_001319816.1	CDS	Amet_1994	NC_009633.1	2069769	2071514	D	KEGG: dsy:DSY1218 hypothetical protein; hypothetical protein	2069769..2071514	Alkaliphilus metalliredigens QYMF	5312065
YP_001319817.1	CDS	Amet_1995	NC_009633.1	2071640	2073844	D	PFAM: leucine-rich repeat protein; Spore coat protein CotH; KEGG: oih:OB2511 hypothetical protein; spore coat protein CotH	2071640..2073844	Alkaliphilus metalliredigens QYMF	5312066
YP_001319818.1	CDS	Amet_1996	NC_009633.1	2074014	2074802	D	KEGG: cth:Cthe_0240 hypothetical protein; hypothetical protein	2074014..2074802	Alkaliphilus metalliredigens QYMF	5312067
YP_001319819.1	CDS	Amet_1997	NC_009633.1	2074751	2075437	D	KEGG: cth:Cthe_0730 hypothetical protein; hypothetical protein	2074751..2075437	Alkaliphilus metalliredigens QYMF	5312068
YP_001319820.1	CDS	Amet_1998	NC_009633.1	2075807	2076877	D	SMART: leucine-rich repeat-containing protein, typical subtype; KEGG: cte:CT1526 Rab family protein; hypothetical protein	2075807..2076877	Alkaliphilus metalliredigens QYMF	5312069
YP_001319821.1	CDS	Amet_1999	NC_009633.1	2077056	2077517	D	PFAM: GCN5-related N-acetyltransferase; KEGG: sma:SAV3950 MutT-like protein; N-acetyltransferase GCN5	2077056..2077517	Alkaliphilus metalliredigens QYMF	5312070
YP_001319822.1	CDS	Amet_2000	NC_009633.1	2078124	2078543	D	TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: bcz:BCZK0942 RNA polymerase sigma-70 factor, ECF family; ECF subfamily RNA polymerase sigma-24 factor	2078124..2078543	Alkaliphilus metalliredigens QYMF	5312071
YP_001319823.1	CDS	Amet_2001	NC_009633.1	2078533	2079285	D	KEGG: cno:NT01CX_1307 hypothetical protein; hypothetical protein	2078533..2079285	Alkaliphilus metalliredigens QYMF	5312072
YP_001319824.1	CDS	Amet_2002	NC_009633.1	2079276	2080142	D	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cno:NT01CX_1308 ABC transporter ATP-binding protein; ABC transporter-like protein	2079276..2080142	Alkaliphilus metalliredigens QYMF	5312073
YP_001319825.1	CDS	Amet_2003	NC_009633.1	2080143	2081393	D	KEGG: cno:NT01CX_1309 hypothetical protein; hypothetical protein	2080143..2081393	Alkaliphilus metalliredigens QYMF	5312074
YP_001319826.1	CDS	Amet_2004	NC_009633.1	2081406	2082659	D	KEGG: cno:NT01CX_1305 lipoprotein, putative; hypothetical protein	2081406..2082659	Alkaliphilus metalliredigens QYMF	5312075
YP_001319827.1	CDS	Amet_2005	NC_009633.1	2082889	2083845	D	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: fnu:FN1521 dipeptide transport system permease protein dppB; binding-protein-dependent transport system inner membrane protein	2082889..2083845	Alkaliphilus metalliredigens QYMF	5312076
YP_001319828.1	CDS	Amet_2006	NC_009633.1	2083832	2084653	D	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: fnu:FN1112 dipeptide transport system permease protein dppC; binding-protein-dependent transport system inner membrane protein	2083832..2084653	Alkaliphilus metalliredigens QYMF	5312077
YP_001319829.1	CDS	Amet_2007	NC_009633.1	2084701	2086266	D	PFAM: extracellular solute-binding protein, family 5; KEGG: fnu:FN1111 dipeptide-binding protein; extracellular solute-binding protein	2084701..2086266	Alkaliphilus metalliredigens QYMF	5312078
YP_001319830.1	CDS	Amet_2008	NC_009633.1	2086272	2087060	D	PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; KEGG: fnu:FN1524 dipeptide transport ATP-binding protein dppD; ABC transporter-like protein	2086272..2087060	Alkaliphilus metalliredigens QYMF	5312079
YP_001319831.1	CDS	Amet_2009	NC_009633.1	2087053	2088072	D	TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; KEGG: fnu:FN1525 dipeptide transport ATP-binding protein dppF; oligopeptide/dipeptide ABC transporter ATPase	2087053..2088072	Alkaliphilus metalliredigens QYMF	5312080
YP_001319832.1	CDS	Amet_2010	NC_009633.1	2088050	2088805	D	PFAM: UbiE/COQ5 methyltransferase; Tellurite resistance protein TehB; Methyltransferase type 11; Methyltransferase type 12; KEGG: msu:MS0467 SmtA protein; type 11 methyltransferase	2088050..2088805	Alkaliphilus metalliredigens QYMF	5312081
YP_001319833.1	CDS	Amet_2011	NC_009633.1	2089110	2090258	D	TIGRFAM: cysteine desulfurase family protein; PFAM: aminotransferase, class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mta:Moth_2214 cysteine desulphurase related, unknown function; cysteine desulfurase	2089110..2090258	Alkaliphilus metalliredigens QYMF	5312082
YP_001319834.1	CDS	Amet_2012	NC_009633.1	2090281	2090814	D	PFAM: Fe-S cluster domain protein; KEGG: mta:Moth_2213 putative Fe-S cluster; Fe-S cluster domain-containing protein	2090281..2090814	Alkaliphilus metalliredigens QYMF	5312083
YP_001319835.1	CDS	Amet_2013	NC_009633.1	2090960	2091319	R	PFAM: regulatory protein, ArsR; KEGG: mta:Moth_2209 transcriptional regulator, ArsR family; regulatory protein ArsR	complement(2090960..2091319)	Alkaliphilus metalliredigens QYMF	5312084
YP_001319836.1	CDS	Amet_2015	NC_009633.1	2091609	2091998	R	hypothetical protein	complement(2091609..2091998)	Alkaliphilus metalliredigens QYMF	5312086
YP_001319837.1	CDS	Amet_2016	NC_009633.1	2093063	2095030	D	TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit; PFAM: Prismane; KEGG: mba:Mbar_A3525 carbon monoxide dehydrogenase; carbon-monoxide dehydrogenase, catalytic subunit	2093063..2095030	Alkaliphilus metalliredigens QYMF	5312087
YP_001319838.1	CDS	Amet_2017	NC_009633.1	2095206	2095982	D	PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: dsy:DSY2631 carbon monoxide dehydrogenase maturation factor; cobyrinic acid a,c-diamide synthase	2095206..2095982	Alkaliphilus metalliredigens QYMF	5312088
YP_001319839.1	CDS	Amet_2018	NC_009633.1	2095979	2097655	D	catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate; formate--tetrahydrofolate ligase	2095979..2097655	Alkaliphilus metalliredigens QYMF	5312089
YP_001319840.1	CDS	Amet_2019	NC_009633.1	2097676	2098305	D	PFAM: Formiminotransferase-cyclodeaminase; KEGG: chy:CHY_1879 methenyltetrahydrofolate cyclohydrolase; formiminotransferase-cyclodeaminase	2097676..2098305	Alkaliphilus metalliredigens QYMF	5312090
YP_001319841.1	CDS	Amet_2020	NC_009633.1	2098423	2099277	D	PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: chy:CHY_1878 methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase; methylenetetrahydrofolate dehydrogenase	2098423..2099277	Alkaliphilus metalliredigens QYMF	5312091
YP_001319842.1	CDS	Amet_2021	NC_009633.1	2099380	2100051	D	KEGG: gme:Gmet_1161 hypothetical protein; hypothetical protein	2099380..2100051	Alkaliphilus metalliredigens QYMF	5312092
YP_001319843.1	CDS	Amet_2022	NC_009633.1	2100073	2100954	D	PFAM: methylenetetrahydrofolate reductase; KEGG: mbu:Mbur_1847 methylenetetrahydrofolate reductase; methylenetetrahydrofolate reductase	2100073..2100954	Alkaliphilus metalliredigens QYMF	5312093
YP_001319844.1	CDS	Amet_2023	NC_009633.1	2100983	2102356	D	TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; HI0933 family protein; KEGG: chy:CHY_0713 alpha keto acid dehydrogenase complex, E3 component, lipoamide dehydrogenase; dihydrolipoamide dehydrogenase	2100983..2102356	Alkaliphilus metalliredigens QYMF	5312094
YP_001319845.1	CDS	Amet_2024	NC_009633.1	2102433	2103206	D	PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: chy:CHY_1225 CO dehydrogenase/acetyl-CoA synthase complex, accessory protein CooC; cobyrinic acid a,c-diamide synthase	2102433..2103206	Alkaliphilus metalliredigens QYMF	5312095
YP_001319846.1	CDS	Amet_2025	NC_009633.1	2103229	2104173	D	part of a complex that catalyzes the cleavage of acetyl-CoA; acetyl-CoA decarbonylase/synthase complex subunit delta	2103229..2104173	Alkaliphilus metalliredigens QYMF	5312096
YP_001319847.1	CDS	Amet_2026	NC_009633.1	2104221	2105588	D	part of a complex that catalyzes the cleavage of acetyl-CoA; acetyl-CoA decarbonylase/synthase complex subunit gamma	2104221..2105588	Alkaliphilus metalliredigens QYMF	5312097
YP_001319848.1	CDS	Amet_2027	NC_009633.1	2105672	2106457	D	PFAM: dihydropteroate synthase, DHPS; KEGG: mta:Moth_1197 dihydropteroate synthase, DhpS; dihydropteroate synthase, DHPS	2105672..2106457	Alkaliphilus metalliredigens QYMF	5312098
YP_001319849.1	CDS	Amet_2028	NC_009633.1	2106481	2108607	D	in acetogenic organisms, this enzyme complex converts carbon dioxide to acetyl-CoA while in methanogenic organisms this enzyme is used to degrade acetyl-CoA to form methane and carbon dioxide; part of an enzyme complex; bifunctional acetyl-CoA decarbonylase/synthase complex subunit alpha/beta	2106481..2108607	Alkaliphilus metalliredigens QYMF	5312099
YP_001319850.1	CDS	Amet_2029	NC_009633.1	2108703	2109074	D	part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H	2108703..2109074	Alkaliphilus metalliredigens QYMF	5312100
YP_001319851.1	CDS	Amet_2030	NC_009633.1	2109289	2111241	D	PFAM: ferredoxin; KEGG: sfu:Sfum_0999 ferredoxin; ferredoxin	2109289..2111241	Alkaliphilus metalliredigens QYMF	5312101
YP_001319852.1	CDS	Amet_2031	NC_009633.1	2111400	2112080	D	KEGG: dsy:DSY2558 hypothetical protein; hypothetical protein	2111400..2112080	Alkaliphilus metalliredigens QYMF	5312102
YP_001319853.1	CDS	Amet_2032	NC_009633.1	2112097	2112465	R	KEGG: hso:HS_1256 periplasmic zinc transporter/adhesin B precursor; periplasmic zinc transporter/adhesin B	complement(2112097..2112465)	Alkaliphilus metalliredigens QYMF	5312103
YP_001319854.1	CDS	Amet_2033	NC_009633.1	2112494	2112913	R	KEGG: cth:Cthe_1015 hypothetical protein; hypothetical protein	complement(2112494..2112913)	Alkaliphilus metalliredigens QYMF	5312104
YP_001319855.1	CDS	Amet_2034	NC_009633.1	2112947	2113135	R	KEGG: sfu:Sfum_0850 hypothetical protein; hypothetical protein	complement(2112947..2113135)	Alkaliphilus metalliredigens QYMF	5312105
YP_001319856.1	CDS	Amet_2035	NC_009633.1	2114087	2115724	D	PFAM: extracellular solute-binding protein, family 5; KEGG: cya:CYA_0149 peptide/opine/nickel ABC transporter (PepT) family, substrate-binding protein; extracellular solute-binding protein	2114087..2115724	Alkaliphilus metalliredigens QYMF	5312106
YP_001319857.1	CDS	Amet_2036	NC_009633.1	2115745	2116740	D	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mma:MM0004 dipeptide ABC transporter, permease protein; binding-protein-dependent transport system inner membrane protein	2115745..2116740	Alkaliphilus metalliredigens QYMF	5312107
YP_001319858.1	CDS	Amet_2037	NC_009633.1	2116737	2117600	D	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mba:Mbar_A1343 dipeptide ABC transporter, permease protein; binding-protein-dependent transport system inner membrane protein	2116737..2117600	Alkaliphilus metalliredigens QYMF	5312108
YP_001319859.1	CDS	Amet_2038	NC_009633.1	2117717	2118670	D	TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; KEGG: dsy:DSY3541 hypothetical protein; oligopeptide/dipeptide ABC transporter ATPase	2117717..2118670	Alkaliphilus metalliredigens QYMF	5312109
YP_001319860.1	CDS	Amet_2039	NC_009633.1	2118660	2119271	D	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dsy:DSY4092 hypothetical protein; ABC transporter-like protein	2118660..2119271	Alkaliphilus metalliredigens QYMF	5312110
YP_001319861.1	CDS	Amet_2040	NC_009633.1	2120327	2120752	D	PFAM: regulatory protein, MarR; KEGG: dsy:DSY0928 hypothetical protein; MarR family transcriptional regulator	2120327..2120752	Alkaliphilus metalliredigens QYMF	5312111
YP_001319862.1	CDS	Amet_2041	NC_009633.1	2120752	2121606	D	PFAM: NmrA family protein; KEGG: lwe:lwe1807 hypothetical protein; NmrA family protein	2120752..2121606	Alkaliphilus metalliredigens QYMF	5312112
YP_001319863.1	CDS	Amet_2042	NC_009633.1	2121772	2122224	R	PFAM: Lytic transglycosylase, catalytic; KEGG: mxa:MXAN_4034 transglycosylase SLT domain protein; lytic transglycosylase catalytic subunit	complement(2121772..2122224)	Alkaliphilus metalliredigens QYMF	5312113
YP_001319864.1	CDS	Amet_2044	NC_009633.1	2123075	2123470	D	KEGG: ppd:Ppro_0806 hypothetical protein; hypothetical protein	2123075..2123470	Alkaliphilus metalliredigens QYMF	5312115
YP_001319865.1	CDS	Amet_2045	NC_009633.1	2123929	2125452	D	PFAM: extracellular solute-binding protein, family 5; KEGG: ssa:SSA_0493 ABC-type dipeptide/nickel transport system, periplasmic component, putative; extracellular solute-binding protein	2123929..2125452	Alkaliphilus metalliredigens QYMF	5312116
YP_001319866.1	CDS	Amet_2046	NC_009633.1	2125496	2126422	D	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: fnu:FN1113 dipeptide transport system permease protein dppB; binding-protein-dependent transport system inner membrane protein	2125496..2126422	Alkaliphilus metalliredigens QYMF	5312117
YP_001319867.1	CDS	Amet_2047	NC_009633.1	2126428	2127246	D	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: fnu:FN1522 dipeptide transport system permease protein dppC; binding-protein-dependent transport system inner membrane protein	2126428..2127246	Alkaliphilus metalliredigens QYMF	5312118
YP_001319868.1	CDS	Amet_2048	NC_009633.1	2127248	2128051	D	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sav:SAV0992 oligopeptide ABC transporter ATP-binding protein homologue; ABC transporter-like protein	2127248..2128051	Alkaliphilus metalliredigens QYMF	5312119
YP_001319869.1	CDS	Amet_2049	NC_009633.1	2128044	2128868	D	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pmu:PM1906 oligopeptide transport ATP-binding protein; ABC transporter-like protein	2128044..2128868	Alkaliphilus metalliredigens QYMF	5312120
YP_001319870.1	CDS	Amet_2050	NC_009633.1	2128888	2129712	D	KEGG: bha:BH2071 hypothetical protein; hypothetical protein	2128888..2129712	Alkaliphilus metalliredigens QYMF	5312121
YP_001319871.1	CDS	Amet_2051	NC_009633.1	2129734	2130531	D	KEGG: bha:BH2072 hypothetical protein; hypothetical protein	2129734..2130531	Alkaliphilus metalliredigens QYMF	5312122
YP_001319872.1	CDS	Amet_2052	NC_009633.1	2130553	2131689	D	hypothetical protein	2130553..2131689	Alkaliphilus metalliredigens QYMF	5312123
YP_001319873.1	CDS	Amet_2053	NC_009633.1	2131713	2132720	D	KEGG: tpe:Tpen_0659 histidyl-tRNA synthetase; histidyl-tRNA synthetase-like protein	2131713..2132720	Alkaliphilus metalliredigens QYMF	5312124
YP_001319874.1	CDS	Amet_2054	NC_009633.1	2132752	2133996	D	PFAM: phosphoribosylglycinamide synthetase; protein of unknown function DUF201; KEGG: plu:plu0116 hypothetical protein; hypothetical protein	2132752..2133996	Alkaliphilus metalliredigens QYMF	5312125
YP_001319875.1	CDS	Amet_2055	NC_009633.1	2134008	2135249	D	KEGG: plu:plu0116 hypothetical protein; hypothetical protein	2134008..2135249	Alkaliphilus metalliredigens QYMF	5312126
YP_001319876.1	CDS	Amet_2056	NC_009633.1	2135287	2136639	D	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: fnu:FN1653 Na+ driven multidrug efflux pump; MATE efflux family protein	2135287..2136639	Alkaliphilus metalliredigens QYMF	5312127
YP_001319877.1	CDS	Amet_2057	NC_009633.1	2136675	2137013	D	hypothetical protein	2136675..2137013	Alkaliphilus metalliredigens QYMF	5312128
YP_001319878.1	CDS	Amet_2058	NC_009633.1	2137999	2139759	R	PFAM: Lytic transglycosylase, catalytic; KEGG: mxa:MXAN_4034 transglycosylase SLT domain protein; lytic transglycosylase catalytic subunit	complement(2137999..2139759)	Alkaliphilus metalliredigens QYMF	5312129
YP_001319879.1	CDS	Amet_2059	NC_009633.1	2140027	2140611	R	PFAM: Cupin 2, conserved barrel domain protein; KEGG: ctc:CTC01899 hypothetical protein; cupin	complement(2140027..2140611)	Alkaliphilus metalliredigens QYMF	5312130
YP_001319880.1	CDS	Amet_2060	NC_009633.1	2140908	2142791	D	PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: swo:Swol_0306 hypothetical protein; sigma-54 dependent trancsriptional regulator	2140908..2142791	Alkaliphilus metalliredigens QYMF	5312131
YP_001319881.1	CDS	Amet_2061	NC_009633.1	2143239	2144801	D	PFAM: extracellular solute-binding protein, family 5; KEGG: fnu:FN0396 dipeptide-binding protein; extracellular solute-binding protein	2143239..2144801	Alkaliphilus metalliredigens QYMF	5312132
YP_001319882.1	CDS	Amet_2062	NC_009633.1	2144967	2145887	D	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: btk:BT9727_4233 oligopeptide transport, system permease; binding-protein-dependent transport system inner membrane protein	2144967..2145887	Alkaliphilus metalliredigens QYMF	5312133
YP_001319883.1	CDS	Amet_2063	NC_009633.1	2145926	2146822	D	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oih:OB3067 oligopeptide ABC transporter permease; binding-protein-dependent transport system inner membrane protein	2145926..2146822	Alkaliphilus metalliredigens QYMF	5312134
YP_001319884.1	CDS	Amet_2064	NC_009633.1	2146841	2147830	D	TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; KEGG: sth:STH2824 oligopeptide ABC transporter ATP-binding protein; oligopeptide/dipeptide ABC transporter ATPase	2146841..2147830	Alkaliphilus metalliredigens QYMF	5312135
YP_001319885.1	CDS	Amet_2065	NC_009633.1	2147823	2148800	D	TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; KEGG: oih:OB2452 oligopeptide ABC transporter ATP-binding protein; oligopeptide/dipeptide ABC transporter ATPase	2147823..2148800	Alkaliphilus metalliredigens QYMF	5312136
YP_001319886.1	CDS	Amet_2066	NC_009633.1	2148901	2150523	D	PFAM: NLP/P60 protein; KEGG: cac:CAC0190 beta-lactamase; NLP/P60 protein	2148901..2150523	Alkaliphilus metalliredigens QYMF	5312137
YP_001319887.1	CDS	Amet_2067	NC_009633.1	2150511	2151875	D	PFAM: amidohydrolase; D-aminoacylase domain protein; Amidohydrolase 3; KEGG: sus:Acid_4612 D-aminoacylase domain protein; N-acyl-D-amino-acid deacylase	2150511..2151875	Alkaliphilus metalliredigens QYMF	5312138
YP_001319888.1	CDS	Amet_2068	NC_009633.1	2151957	2152778	D	PFAM: peptidase M55, D-aminopeptidase; KEGG: lwe:lwe0139 D-alanyl-aminopeptidase; peptidase M55, D-aminopeptidase	2151957..2152778	Alkaliphilus metalliredigens QYMF	5312139
YP_001319889.1	CDS	Amet_2069	NC_009633.1	2153158	2155479	D	TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; KEGG: mgm:Mmc1_2953 multi-sensor hybrid histidine kinase; PAS/PAC sensor hybrid histidine kinase	2153158..2155479	Alkaliphilus metalliredigens QYMF	5312140
YP_001319890.1	CDS	Amet_2070	NC_009633.1	2155679	2156287	D	PFAM: regulatory protein, TetR; KEGG: bcl:ABC3316 transcriptional regulator, TetR family; TetR family transcriptional regulator	2155679..2156287	Alkaliphilus metalliredigens QYMF	5312141
YP_001319891.1	CDS	Amet_2072	NC_009633.1	2157300	2157731	D	PFAM: regulatory protein, MarR; KEGG: cpr:CPR_1032 transcriptional regulator, MarR family; MarR family transcriptional regulator	2157300..2157731	Alkaliphilus metalliredigens QYMF	5312143
YP_001319892.1	CDS	Amet_2073	NC_009633.1	2157964	2158170	D	hypothetical protein	2157964..2158170	Alkaliphilus metalliredigens QYMF	5312144
YP_001319893.1	CDS	Amet_2074	NC_009633.1	2158402	2159610	D	PFAM: Extracellular ligand-binding receptor; KEGG: mta:Moth_2502 extracellular ligand-binding receptor; extracellular ligand-binding receptor	2158402..2159610	Alkaliphilus metalliredigens QYMF	5312145
YP_001319894.1	CDS	Amet_2075	NC_009633.1	2159792	2160670	D	PFAM: inner-membrane translocator; KEGG: chy:CHY_2231 high affinity branched-chain amino acid ABC transporter, permease protein; inner-membrane translocator	2159792..2160670	Alkaliphilus metalliredigens QYMF	5312146
YP_001319895.1	CDS	Amet_2076	NC_009633.1	2160682	2161578	D	PFAM: inner-membrane translocator; KEGG: chy:CHY_2230 high affinity branched-chain amino acid ABC transporter, permease protein; inner-membrane translocator	2160682..2161578	Alkaliphilus metalliredigens QYMF	5312147
YP_001319896.1	CDS	Amet_2077	NC_009633.1	2161575	2162348	D	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sth:STH824 branched chain amino acid ABC transporter ATP-binding protein; ABC transporter-like protein	2161575..2162348	Alkaliphilus metalliredigens QYMF	5312148
YP_001319897.1	CDS	Amet_2078	NC_009633.1	2162342	2163064	D	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: chy:CHY_2228 high affinity branched-chain amino acid ABC transporter, ATP-binding protein; ABC transporter-like protein	2162342..2163064	Alkaliphilus metalliredigens QYMF	5312149
YP_001319898.1	CDS	Amet_2079	NC_009633.1	2163447	2164922	D	PFAM: protein of unknown function UPF0061; KEGG: btl:BALH_3159 hypothetical protein; hypothetical protein	2163447..2164922	Alkaliphilus metalliredigens QYMF	5312150
YP_001319899.1	CDS	Amet_2080	NC_009633.1	2165166	2165975	D	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: pen:PSEEN0400 amidohydrolase, carbon-nitrogen family; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase	2165166..2165975	Alkaliphilus metalliredigens QYMF	5312151
YP_001319900.1	CDS	Amet_2081	NC_009633.1	2166041	2166178	D	hypothetical protein	2166041..2166178	Alkaliphilus metalliredigens QYMF	5312152
YP_001319901.1	CDS	Amet_2082	NC_009633.1	2166353	2166547	D	PFAM: helix-turn-helix domain protein; KEGG: btl:BALH_0634 transcriptional regulator; XRE family transcriptional regulator	2166353..2166547	Alkaliphilus metalliredigens QYMF	5312153
YP_001319902.1	CDS	Amet_2083	NC_009633.1	2166590	2166874	D	hypothetical protein	2166590..2166874	Alkaliphilus metalliredigens QYMF	5312154
YP_001319903.1	CDS	Amet_2084	NC_009633.1	2166954	2167601	R	PFAM: regulatory protein, TetR; KEGG: sma:SAV4701 TetR-family transcriptional regulator; TetR family transcriptional regulator	complement(2166954..2167601)	Alkaliphilus metalliredigens QYMF	5312155
YP_001319904.1	CDS	Amet_2085	NC_009633.1	2167802	2168626	D	catalyzes the transfer of the N5-methyl group from (6S)-methyl tetrahydrofolate to the cobalt center of a corrinoid iron-sulfur protein; methyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase	2167802..2168626	Alkaliphilus metalliredigens QYMF	5312156
YP_001319905.1	CDS	Amet_2086	NC_009633.1	2168699	2169349	D	PFAM: Methionine synthase, B12-binding module, cap domain protein; cobalamin B12-binding domain protein; KEGG: dsy:DSY0588 hypothetical protein; cobalamin B12-binding domain-containing protein	2168699..2169349	Alkaliphilus metalliredigens QYMF	5312157
YP_001319906.1	CDS	Amet_2087	NC_009633.1	2169351	2170508	D	KEGG: dsy:DSY2720 hypothetical protein; hypothetical protein	2169351..2170508	Alkaliphilus metalliredigens QYMF	5312158
YP_001319907.1	CDS	Amet_2088	NC_009633.1	2170512	2170664	D	hypothetical protein	2170512..2170664	Alkaliphilus metalliredigens QYMF	5312159
YP_001319908.1	CDS	Amet_2089	NC_009633.1	2170754	2172118	D	TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; PFAM: major facilitator superfamily MFS_1; KEGG: ppe:PEPE_0185 Na+/xyloside symporter related transporter; sugar (glycoside-Pentoside-hexuronide) transporter	2170754..2172118	Alkaliphilus metalliredigens QYMF	5312160
YP_001319909.1	CDS	Amet_2090	NC_009633.1	2172272	2173594	D	PFAM: nucleoside recognition domain protein; KEGG: bca:BCE_3131 hypothetical protein; nucleoside recognition domain-containing protein	2172272..2173594	Alkaliphilus metalliredigens QYMF	5312161
YP_001319910.1	CDS	Amet_2091	NC_009633.1	2173878	2174192	D	hypothetical protein	2173878..2174192	Alkaliphilus metalliredigens QYMF	5312162
YP_001319911.1	CDS	Amet_2092	NC_009633.1	2174570	2175379	D	catalyzes the transfer of the N5-methyl group from (6S)-methyl tetrahydrofolate to the cobalt center of a corrinoid iron-sulfur protein; methyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase	2174570..2175379	Alkaliphilus metalliredigens QYMF	5312163
YP_001319912.1	CDS	Amet_2093	NC_009633.1	2175440	2176090	D	PFAM: Methionine synthase, B12-binding module, cap domain protein; cobalamin B12-binding domain protein; KEGG: dsy:DSY0588 hypothetical protein; cobalamin B12-binding domain-containing protein	2175440..2176090	Alkaliphilus metalliredigens QYMF	5312164
YP_001319913.1	CDS	Amet_2094	NC_009633.1	2176144	2177508	D	KEGG: saz:Sama_1401 sugar (glycoside-pentoside-hexuronide) transporter; Na+/melibiose symporter and related transporter-like protein	2176144..2177508	Alkaliphilus metalliredigens QYMF	5312165
YP_001319914.1	CDS	Amet_2095	NC_009633.1	2177634	2178809	D	KEGG: dsy:DSY2720 hypothetical protein; hypothetical protein	2177634..2178809	Alkaliphilus metalliredigens QYMF	5312166
YP_001319915.1	CDS	Amet_2096	NC_009633.1	2178824	2178967	D	hypothetical protein	2178824..2178967	Alkaliphilus metalliredigens QYMF	5312167
YP_001319916.1	CDS	Amet_2097	NC_009633.1	2179174	2179854	D	PFAM: Methionine synthase, B12-binding module, cap domain protein; cobalamin B12-binding domain protein; KEGG: dsy:DSY2717 hypothetical protein; cobalamin B12-binding domain-containing protein	2179174..2179854	Alkaliphilus metalliredigens QYMF	5312168
YP_001319917.1	CDS	Amet_2098	NC_009633.1	2179861	2180559	D	PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated domain protein; KEGG: dsy:DSY2716 hypothetical protein; GntR family transcriptional regulator	2179861..2180559	Alkaliphilus metalliredigens QYMF	5312169
YP_001319918.1	CDS	Amet_2099	NC_009633.1	2180572	2182362	D	PFAM: ferredoxin; KEGG: dsy:DSY2715 hypothetical protein; ferredoxin	2180572..2182362	Alkaliphilus metalliredigens QYMF	5312170
YP_001319919.1	CDS	Amet_2100	NC_009633.1	2182404	2182961	D	KEGG: dsy:DSY4699 hypothetical protein; hypothetical protein	2182404..2182961	Alkaliphilus metalliredigens QYMF	5312171
YP_001319920.1	CDS	Amet_2101	NC_009633.1	2183068	2183739	D	PFAM: Protein of unknown function DUF1638; KEGG: dsy:DSY2718 hypothetical protein; hypothetical protein	2183068..2183739	Alkaliphilus metalliredigens QYMF	5312172
YP_001319921.1	CDS	Amet_2102	NC_009633.1	2184817	2185377	D	hypothetical protein	2184817..2185377	Alkaliphilus metalliredigens QYMF	5312173
YP_001319922.1	CDS	Amet_2103	NC_009633.1	2185595	2186050	D	hypothetical protein	2185595..2186050	Alkaliphilus metalliredigens QYMF	5312174
YP_001319923.1	CDS	Amet_2104	NC_009633.1	2186064	2186282	D	SMART: helix-turn-helix domain protein; KEGG: bfs:BF4143 putative DNA-binding protein; XRE family transcriptional regulator	2186064..2186282	Alkaliphilus metalliredigens QYMF	5312175
YP_001319924.1	CDS	Amet_2105	NC_009633.1	2186386	2187171	D	hypothetical protein	2186386..2187171	Alkaliphilus metalliredigens QYMF	5312176
YP_001319925.1	CDS	Amet_2106	NC_009633.1	2187445	2187963	D	hypothetical protein	2187445..2187963	Alkaliphilus metalliredigens QYMF	5312177
YP_001319926.1	CDS	Amet_2107	NC_009633.1	2188022	2188552	D	hypothetical protein	2188022..2188552	Alkaliphilus metalliredigens QYMF	5312178
YP_001319927.1	CDS	Amet_2109	NC_009633.1	2188935	2189156	D	KEGG: cno:NT01CX_2295 transcription regulator, Cro/CI family -related protein; XRE family transcriptional regulator	2188935..2189156	Alkaliphilus metalliredigens QYMF	5312180
YP_001319928.1	CDS	Amet_2110	NC_009633.1	2189700	2190140	D	hypothetical protein	2189700..2190140	Alkaliphilus metalliredigens QYMF	5312181
YP_001319929.1	CDS	Amet_2111	NC_009633.1	2190801	2191097	D	KEGG: oih:OB3323 hypothetical protein; hypothetical protein	2190801..2191097	Alkaliphilus metalliredigens QYMF	5312182
YP_001319930.1	CDS	Amet_2112	NC_009633.1	2191464	2191673	R	hypothetical protein	complement(2191464..2191673)	Alkaliphilus metalliredigens QYMF	5312183
YP_001319931.1	CDS	Amet_2113	NC_009633.1	2191677	2192420	R	PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: dsy:DSY0836 hypothetical protein; IstB ATP binding domain-containing protein	complement(2191677..2192420)	Alkaliphilus metalliredigens QYMF	5312184
YP_001319932.1	CDS	Amet_2114	NC_009633.1	2192408	2193961	R	PFAM: Integrase, catalytic region; KEGG: bha:BH3965 transposase (22); integrase catalytic subunit	complement(2192408..2193961)	Alkaliphilus metalliredigens QYMF	5312185
YP_001319933.1	CDS	Amet_2115	NC_009633.1	2194064	2194312	D	hypothetical protein	2194064..2194312	Alkaliphilus metalliredigens QYMF	5312186
YP_001319934.1	CDS	Amet_2116	NC_009633.1	2194804	2194992	D	PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator	2194804..2194992	Alkaliphilus metalliredigens QYMF	5312187
YP_001319935.1	CDS	Amet_2117	NC_009633.1	2195054	2195371	D	hypothetical protein	2195054..2195371	Alkaliphilus metalliredigens QYMF	5312188
YP_001319936.1	CDS	Amet_2118	NC_009633.1	2195501	2196352	D	KEGG: saa:SAUSA300_1957 phiPVL ORF046-like protein; hypothetical protein	2195501..2196352	Alkaliphilus metalliredigens QYMF	5312189
YP_001319937.1	CDS	Amet_2119	NC_009633.1	2196330	2197127	D	SMART: AAA ATPase; KEGG: cac:CAC1933 hypothetical protein; hypothetical protein	2196330..2197127	Alkaliphilus metalliredigens QYMF	5312190
YP_001319938.1	CDS	Amet_2120	NC_009633.1	2197646	2198056	D	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: lpp:lpp0588 hypothetical protein; glutathione transferase	2197646..2198056	Alkaliphilus metalliredigens QYMF	5312191
YP_001319939.1	CDS	Amet_2121	NC_009633.1	2198369	2199037	D	PFAM: Abortive infection protein; KEGG: bat:BAS2703 CAAX amino terminal protease family protein; abortive infection protein	2198369..2199037	Alkaliphilus metalliredigens QYMF	5312192
YP_001319940.1	CDS	Amet_2122	NC_009633.1	2199346	2200236	D	PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: sma:SAV6733 serine protease; peptidase S8/S53 subtilisin kexin sedolisin	2199346..2200236	Alkaliphilus metalliredigens QYMF	5312193
YP_001319941.1	CDS	Amet_2123	NC_009633.1	2200464	2200793	R	hypothetical protein	complement(2200464..2200793)	Alkaliphilus metalliredigens QYMF	5312194
YP_001319942.1	CDS	Amet_2124	NC_009633.1	2200833	2201174	R	hypothetical protein	complement(2200833..2201174)	Alkaliphilus metalliredigens QYMF	5312195
YP_001319943.1	CDS	Amet_2125	NC_009633.1	2201859	2202521	D	hypothetical protein	2201859..2202521	Alkaliphilus metalliredigens QYMF	5312196
YP_001319944.1	CDS	Amet_2126	NC_009633.1	2202636	2202818	D	hypothetical protein	2202636..2202818	Alkaliphilus metalliredigens QYMF	5312197
YP_001319945.1	CDS	Amet_2127	NC_009633.1	2202834	2203301	D	KEGG: dsy:DSY1730 hypothetical protein; hypothetical protein	2202834..2203301	Alkaliphilus metalliredigens QYMF	5312198
YP_001319946.1	CDS	Amet_2128	NC_009633.1	2203591	2204130	D	KEGG: bha:BH2705 hypothetical protein; hypothetical protein	2203591..2204130	Alkaliphilus metalliredigens QYMF	5312199
YP_001319947.1	CDS	Amet_2129	NC_009633.1	2204258	2204788	D	KEGG: mla:Mlab_0185 hypothetical protein; hypothetical protein	2204258..2204788	Alkaliphilus metalliredigens QYMF	5312200
YP_001319948.1	CDS	Amet_2130	NC_009633.1	2204911	2205399	D	PFAM: GCN5-related N-acetyltransferase; KEGG: dsy:DSY2844 hypothetical protein; N-acetyltransferase GCN5	2204911..2205399	Alkaliphilus metalliredigens QYMF	5312201
YP_001319949.1	CDS	Amet_2131	NC_009633.1	2205437	2205895	D	PFAM: GCN5-related N-acetyltransferase; KEGG: eca:ECA3643 GnaT-family acetyltransferase; N-acetyltransferase GCN5	2205437..2205895	Alkaliphilus metalliredigens QYMF	5312202
YP_001319950.1	CDS	Amet_2132	NC_009633.1	2206294	2207499	R	PFAM: transposase IS116/IS110/IS902 family protein; KEGG: gka:GK3301 transposase; transposase IS116/IS110/IS902 family protein	complement(2206294..2207499)	Alkaliphilus metalliredigens QYMF	5312203
YP_001319951.1	CDS	Amet_2133	NC_009633.1	2207804	2208046	D	KEGG: gka:GK1812 hypothetical protein; hypothetical protein	2207804..2208046	Alkaliphilus metalliredigens QYMF	5312204
YP_001319952.1	CDS	Amet_2134	NC_009633.1	2208048	2208431	D	KEGG: gka:GK1811 hypothetical protein; hypothetical protein	2208048..2208431	Alkaliphilus metalliredigens QYMF	5312205
YP_001319953.1	CDS	Amet_2135	NC_009633.1	2208552	2208893	R	hypothetical protein	complement(2208552..2208893)	Alkaliphilus metalliredigens QYMF	5312206
YP_001319954.1	CDS	Amet_2136	NC_009633.1	2209384	2209614	R	KEGG: chy:CHY_0145 hypothetical protein; hypothetical protein	complement(2209384..2209614)	Alkaliphilus metalliredigens QYMF	5312207
YP_001319955.1	CDS	Amet_2137	NC_009633.1	2209669	2209893	R	hypothetical protein	complement(2209669..2209893)	Alkaliphilus metalliredigens QYMF	5312208
YP_001319956.1	CDS	Amet_2138	NC_009633.1	2209943	2210275	R	hypothetical protein	complement(2209943..2210275)	Alkaliphilus metalliredigens QYMF	5312209
YP_001319957.1	CDS	Amet_2139	NC_009633.1	2210300	2210659	R	PFAM: protein of unknown function DUF882; Peptidase M15A; KEGG: dde:Dde_1882 hypothetical protein; peptidase M15A	complement(2210300..2210659)	Alkaliphilus metalliredigens QYMF	5312210
YP_001319958.1	CDS	Amet_2140	NC_009633.1	2210943	2211329	D	hypothetical protein	2210943..2211329	Alkaliphilus metalliredigens QYMF	5312211
YP_001319959.1	CDS	Amet_2141	NC_009633.1	2211590	2211775	D	hypothetical protein	2211590..2211775	Alkaliphilus metalliredigens QYMF	5312212
YP_001319960.1	CDS	Amet_2142	NC_009633.1	2211765	2211932	D	KEGG: cac:CAC0339 ADP-ribosylglycohydrolase; ADP-ribosylglycohydrolase	2211765..2211932	Alkaliphilus metalliredigens QYMF	5312213
YP_001319961.1	CDS	Amet_2143	NC_009633.1	2212187	2213059	D	KEGG: sru:SRU_0541 hypothetical protein; hypothetical protein	2212187..2213059	Alkaliphilus metalliredigens QYMF	5312214
YP_001319962.1	CDS	Amet_2144	NC_009633.1	2214234	2216972	D	PFAM: sigma-70 region 4 domain protein; RNA polymerase, alpha subunit domain protein; KEGG: ppe:PEPE_0533 hypothetical protein; RNA polymerase subunit alpha	2214234..2216972	Alkaliphilus metalliredigens QYMF	5312215
YP_001319963.1	CDS	Amet_2145	NC_009633.1	2216975	2218189	D	KEGG: ppe:PEPE_0534 hypothetical protein; hypothetical protein	2216975..2218189	Alkaliphilus metalliredigens QYMF	5312216
YP_001319964.1	CDS	Amet_2146	NC_009633.1	2218182	2220752	D	PFAM: helicase domain protein; SMART: DEAD-like helicases-like; KEGG: ppe:PEPE_0535 superfamily II DNA/RNA helicase, SNF2 family; helicase domain-containing protein	2218182..2220752	Alkaliphilus metalliredigens QYMF	5312217
YP_001319965.1	CDS	Amet_2147	NC_009633.1	2221107	2223437	R	KEGG: oih:OB3358 hypothetical protein; hypothetical protein	complement(2221107..2223437)	Alkaliphilus metalliredigens QYMF	5312218
YP_001319966.1	CDS	Amet_2148	NC_009633.1	2223509	2223850	R	hypothetical protein	complement(2223509..2223850)	Alkaliphilus metalliredigens QYMF	5312219
YP_001319967.1	CDS	Amet_2149	NC_009633.1	2223851	2224354	R	TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: oih:OB1269 RNA polymerase ECF-type sigma factor; ECF subfamily RNA polymerase sigma-24 factor	complement(2223851..2224354)	Alkaliphilus metalliredigens QYMF	5312220
YP_001319968.1	CDS	Amet_2150	NC_009633.1	2224690	2226084	D	KEGG: dsy:DSY0708 hypothetical protein; hypothetical protein	2224690..2226084	Alkaliphilus metalliredigens QYMF	5312221
YP_001319969.1	CDS	Amet_2151	NC_009633.1	2226086	2226712	D	KEGG: chy:CHY_1719 hypothetical protein; hypothetical protein	2226086..2226712	Alkaliphilus metalliredigens QYMF	5312222
YP_001319970.1	CDS	Amet_2152	NC_009633.1	2226681	2229926	D	KEGG: chy:CHY_1718 MukB N-terminal domain/M protein repeat protein; M protein-like MukB domain-containing protein	2226681..2229926	Alkaliphilus metalliredigens QYMF	5312223
YP_001319971.1	CDS	Amet_2153	NC_009633.1	2229913	2231118	D	KEGG: chy:CHY_1717 hypothetical protein; hypothetical protein	2229913..2231118	Alkaliphilus metalliredigens QYMF	5312224
YP_001319972.1	CDS	Amet_2154	NC_009633.1	2231214	2231375	D	hypothetical protein	2231214..2231375	Alkaliphilus metalliredigens QYMF	5312225
YP_001319973.1	CDS	Amet_2155	NC_009633.1	2231473	2232708	D	PFAM: MscS Mechanosensitive ion channel; KEGG: bfs:BF0722 putative transmembrane transport protein; mechanosensitive ion channel protein MscS	2231473..2232708	Alkaliphilus metalliredigens QYMF	5312226
YP_001319974.1	CDS	Amet_2156	NC_009633.1	2232746	2233246	D	TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: cpr:CPR_1097 HDIG/HD domain protein; metal dependent phosphohydrolase	2232746..2233246	Alkaliphilus metalliredigens QYMF	5312227
YP_001319975.1	CDS	Amet_2157	NC_009633.1	2233401	2233991	D	TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: cno:NT01CX_0380 anthranilate synthase component II; glutamine amidotransferase of anthranilate synthase	2233401..2233991	Alkaliphilus metalliredigens QYMF	5312228
YP_001319976.1	CDS	Amet_2158	NC_009633.1	2233982	2235352	D	TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Anthranilate synthase component I and chorismate binding protein; Anthranilate synthase component I domain protein; KEGG: cno:NT01CX_0379 anthranilate synthase component I; para-aminobenzoate synthase subunit I	2233982..2235352	Alkaliphilus metalliredigens QYMF	5312229
YP_001319977.1	CDS	Amet_2159	NC_009633.1	2235395	2236213	D	PFAM: aminotransferase, class IV; KEGG: cno:NT01CX_0378 4-amino-4-deoxychorismate lyase; class IV aminotransferase	2235395..2236213	Alkaliphilus metalliredigens QYMF	5312230
YP_001319978.1	CDS	folE	NC_009633.1	2236234	2236800	D	involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I	2236234..2236800	Alkaliphilus metalliredigens QYMF	5312231
YP_001319979.1	CDS	Amet_2161	NC_009633.1	2236817	2237677	D	TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase, DHPS; KEGG: chy:CHY_2383 dihydropteroate synthase; dihydropteroate synthase	2236817..2237677	Alkaliphilus metalliredigens QYMF	5312232
YP_001319980.1	CDS	Amet_2162	NC_009633.1	2237670	2238029	D	TIGRFAM: dihydroneopterin aldolase; KEGG: cth:Cthe_2582 dihydroneopterin aldolase; dihydroneopterin aldolase	2237670..2238029	Alkaliphilus metalliredigens QYMF	5312233
YP_001319981.1	CDS	Amet_2163	NC_009633.1	2238029	2238514	D	TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; KEGG: tte:TTE2369 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase	2238029..2238514	Alkaliphilus metalliredigens QYMF	5312234
YP_001319982.1	CDS	Amet_2164	NC_009633.1	2238504	2239280	D	TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; KEGG: tte:TTE1013 phospho-2-dehydro-3-deoxyheptonate aldolase; phospho-2-dehydro-3-deoxyheptonate aldolase	2238504..2239280	Alkaliphilus metalliredigens QYMF	5312235
YP_001319983.1	CDS	Amet_2165	NC_009633.1	2239461	2240687	D	PFAM: proteinase inhibitor I4, serpin; KEGG: cth:Cthe_1270 proteinase inhibitor I4, serpin; proteinase inhibitor I4 serpin	2239461..2240687	Alkaliphilus metalliredigens QYMF	5312236
YP_001319984.1	CDS	Amet_2166	NC_009633.1	2240804	2241010	D	PFAM: small acid-soluble spore H family protein; KEGG: bld:BLi02904 acid-soluble spore protein H; small acid-soluble spore H family protein	2240804..2241010	Alkaliphilus metalliredigens QYMF	5312237
YP_001319985.1	CDS	Amet_2167	NC_009633.1	2241251	2241808	D	hypothetical protein	2241251..2241808	Alkaliphilus metalliredigens QYMF	5312238
YP_001319986.1	CDS	Amet_2168	NC_009633.1	2241838	2242011	D	hypothetical protein	2241838..2242011	Alkaliphilus metalliredigens QYMF	5312239
YP_001319987.1	CDS	Amet_2169	NC_009633.1	2242223	2242822	D	KEGG: chu:CHU_2254 hypothetical protein; hypothetical protein	2242223..2242822	Alkaliphilus metalliredigens QYMF	5312240
YP_001319988.1	CDS	Amet_2170	NC_009633.1	2242822	2244255	D	PFAM: band 7 protein; KEGG: chu:CHU_2255 hypothetical protein; hypothetical protein	2242822..2244255	Alkaliphilus metalliredigens QYMF	5312241
YP_001319989.1	CDS	Amet_2171	NC_009633.1	2244802	2246112	D	catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase	2244802..2246112	Alkaliphilus metalliredigens QYMF	5312242
YP_001319990.1	CDS	Amet_2172	NC_009633.1	2246204	2247196	D	TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: dar:Daro_2825 PAS:GGDEF; PAS/PAC sensor-containing diguanylate cyclase	2246204..2247196	Alkaliphilus metalliredigens QYMF	5312243
YP_001319991.1	CDS	Amet_2173	NC_009633.1	2247407	2248813	D	PFAM: AMMECR1 domain protein; Extradiol ring-cleavage dioxygenase, class III protein, subunit B; KEGG: cac:CAC1420 protein with a fusion of two uncharacterized domains, typical for archaea; hypothetical protein	2247407..2248813	Alkaliphilus metalliredigens QYMF	5312244
YP_001319992.1	CDS	Amet_2174	NC_009633.1	2248830	2249684	D	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cac:CAC1421 pyruvate-formate lyase-activating enzyme; radical SAM domain-containing protein	2248830..2249684	Alkaliphilus metalliredigens QYMF	5312245
YP_001319993.1	CDS	Amet_2175	NC_009633.1	2249708	2251588	R	PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: cno:NT01CX_1825 ABC-type multidrug/protein/lipid transport system, ATPase; ABC transporter-like protein	complement(2249708..2251588)	Alkaliphilus metalliredigens QYMF	5312246
YP_001319994.1	CDS	Amet_2176	NC_009633.1	2251585	2253315	R	PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: sth:STH2016 ABC transporter ATP-binding protein; ABC transporter transmembrane region	complement(2251585..2253315)	Alkaliphilus metalliredigens QYMF	5312247
YP_001319995.1	CDS	Amet_2177	NC_009633.1	2253569	2254576	D	hypothetical protein	2253569..2254576	Alkaliphilus metalliredigens QYMF	5312248
YP_001319996.1	CDS	Amet_2178	NC_009633.1	2254977	2255633	D	KEGG: bha:BH2269 hypothetical protein; hypothetical protein	2254977..2255633	Alkaliphilus metalliredigens QYMF	5312249
YP_001319997.1	CDS	Amet_2179	NC_009633.1	2255814	2256467	D	PFAM: 60 kDa inner membrane insertion protein; KEGG: chy:CHY_0004 sporulation associated-membrane protein; 60 kDa inner membrane insertion protein	2255814..2256467	Alkaliphilus metalliredigens QYMF	5312250
YP_001319998.1	CDS	Amet_2180	NC_009633.1	2256633	2257712	D	PFAM: protein of unknown function UPF0118; KEGG: bha:BH2921 hypothetical protein; hypothetical protein	2256633..2257712	Alkaliphilus metalliredigens QYMF	5312251
YP_001319999.1	CDS	Amet_2181	NC_009633.1	2257935	2258675	D	PFAM: RelA/SpoT domain protein; KEGG: bha:BH1885 hypothetical protein; RelA/SpoT domain-containing protein	2257935..2258675	Alkaliphilus metalliredigens QYMF	5312252
YP_001320000.1	CDS	Amet_2182	NC_009633.1	2258921	2259739	D	PFAM: Ion transport protein; Ion transport 2 domain protein; KEGG: cvi:CV3562 probable ion transporter; Ion transport protein	2258921..2259739	Alkaliphilus metalliredigens QYMF	5312253
YP_001320001.1	CDS	Amet_2183	NC_009633.1	2259925	2261580	D	TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; KEGG: gka:GK1608 penicillin-binding protein, peptidoglycan glycosyltransferase; 1A family penicillin-binding protein	2259925..2261580	Alkaliphilus metalliredigens QYMF	5312254
YP_001320002.1	CDS	Amet_2184	NC_009633.1	2261511	2262467	R	PFAM: Resolvase, N-terminal domain; KEGG: cno:NT01CX_1717 site-specific recombinases, DNA invertase Pin-like protein; resolvase domain-containing protein	complement(2261511..2262467)	Alkaliphilus metalliredigens QYMF	5312255
YP_001320003.1	CDS	Amet_2185	NC_009633.1	2262831	2263046	R	hypothetical protein	complement(2262831..2263046)	Alkaliphilus metalliredigens QYMF	5312256
YP_001320004.1	CDS	Amet_2186	NC_009633.1	2263116	2263583	R	PFAM: helix-turn-helix domain protein; KEGG: cno:NT01CX_1719 helix-turn-helix domain protein; XRE family transcriptional regulator	complement(2263116..2263583)	Alkaliphilus metalliredigens QYMF	5312257
YP_001320005.1	CDS	Amet_2187	NC_009633.1	2263887	2264834	D	PFAM: Helix-turn-helix, type 11 domain protein; KEGG: btl:BALH_0837 hypothetical protein; helix-turn-helix, type 11 domain-containing protein	2263887..2264834	Alkaliphilus metalliredigens QYMF	5312258
YP_001320006.1	CDS	Amet_2188	NC_009633.1	2265010	2266470	R	KEGG: ctc:CTC00917 transposase; transposase	complement(2265010..2266470)	Alkaliphilus metalliredigens QYMF	5312259
YP_001320007.1	CDS	Amet_2189	NC_009633.1	2266591	2267364	D	TIGRFAM: CRISPR-associated protein Cas6; PFAM: protein of unknown function DUF57; KEGG: ctc:CTC01142 hypothetical protein; CRISPR-associated Cas family protein	2266591..2267364	Alkaliphilus metalliredigens QYMF	5312260
YP_001320008.1	CDS	Amet_2190	NC_009633.1	2267378	2269042	D	TIGRFAM: CRISPR-associated CXXC_CXXC protein Cst1; KEGG: aae:aq_372 putative protein; CRISPR-associated Cst1 family protein	2267378..2269042	Alkaliphilus metalliredigens QYMF	5312261
YP_001320009.1	CDS	Amet_2191	NC_009633.1	2269042	2269926	D	TIGRFAM: CRISPR-associated autoregulator DevR family; CRISPR-associated regulatory protein, DevR family; KEGG: aae:aq_374 hypothetical protein; CRISPR-associated autoregulator DevR family protein	2269042..2269926	Alkaliphilus metalliredigens QYMF	5312262
YP_001320010.1	CDS	Amet_2192	NC_009633.1	2269913	2270692	D	TIGRFAM: CRISPR-associated protein Cas5 family; CRISPR-associated protein Cas5; KEGG: ctc:CTC01145 hypothetical protein; CRISPR-associated Cas5 family protein	2269913..2270692	Alkaliphilus metalliredigens QYMF	5312263
YP_001320011.1	CDS	Amet_2193	NC_009633.1	2270714	2272945	D	TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated HD domain protein; PFAM: metal-dependent phosphohydrolase, HD sub domain; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: cpr:CPR_0922 CRISPR-associated helicase Cas3 domain protein; metal dependent phosphohydrolase	2270714..2272945	Alkaliphilus metalliredigens QYMF	5312264
YP_001320012.1	CDS	Amet_2194	NC_009633.1	2272969	2273460	D	TIGRFAM: CRISPR-associated protein Cas4; PFAM: protein of unknown function DUF83; KEGG: ctc:CTC01147 hypothetical protein; CRISPR-associated Cas4 family protein	2272969..2273460	Alkaliphilus metalliredigens QYMF	5312265
YP_001320013.1	CDS	Amet_2195	NC_009633.1	2273471	2274463	D	TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48; KEGG: fnu:FN1177 hypothetical protein; CRISPR-associated Cas1 family protein	2273471..2274463	Alkaliphilus metalliredigens QYMF	5312266
YP_001320014.1	CDS	Amet_2196	NC_009633.1	2274468	2274746	D	TIGRFAM: CRISPR-associated protein Cas2; PFAM: protein of unknown function DUF196; KEGG: fnu:FN1176 hypothetical cytosolic protein; CRISPR-associated Cas2 family protein	2274468..2274746	Alkaliphilus metalliredigens QYMF	5312267
YP_001320015.1	CDS	Amet_2198	NC_009633.1	2279941	2280327	D	KEGG: btl:BALH_2715 hypothetical protein; hypothetical protein	2279941..2280327	Alkaliphilus metalliredigens QYMF	5312269
YP_001320016.1	CDS	Amet_2199	NC_009633.1	2280371	2280862	D	PFAM: protein of unknown function DUF45; KEGG: bat:BAS0322 hypothetical protein; hypothetical protein	2280371..2280862	Alkaliphilus metalliredigens QYMF	5312270
YP_001320017.1	CDS	Amet_2200	NC_009633.1	2280993	2282021	R	KEGG: cac:CAC0978 possible elongation subunit of DNA-dependent DNA polymerase; exonuclease-like protein	complement(2280993..2282021)	Alkaliphilus metalliredigens QYMF	5312271
YP_001320018.1	CDS	Amet_2201	NC_009633.1	2282193	2283719	D	PFAM: S-layer domain protein; KEGG: cth:Cthe_2809 glycoside hydrolase, family 16; S-layer protein	2282193..2283719	Alkaliphilus metalliredigens QYMF	5312272
YP_001320019.1	CDS	Amet_2202	NC_009633.1	2283915	2285951	D	PFAM: UvrD/REP helicase; KEGG: sth:STH611 ATP-dependent DNA helicase; UvrD/REP helicase	2283915..2285951	Alkaliphilus metalliredigens QYMF	5312273
YP_001320020.1	CDS	Amet_2203	NC_009633.1	2285968	2286960	R	PFAM: Asparaginase/glutaminase; KEGG: cac:CAC1714 L-asparaginase; asparaginase/glutaminase	complement(2285968..2286960)	Alkaliphilus metalliredigens QYMF	5312274
YP_001320021.1	CDS	Amet_2204	NC_009633.1	2287325	2287936	D	PFAM: protein of unknown function DUF1121; KEGG: cno:NT01CX_1623 hypothetical protein; hypothetical protein	2287325..2287936	Alkaliphilus metalliredigens QYMF	5312275
YP_001320022.1	CDS	Amet_2205	NC_009633.1	2288156	2289313	D	PFAM: aminotransferase, class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: cpf:CPF_1667 aminotransferase, class V; class V aminotransferase	2288156..2289313	Alkaliphilus metalliredigens QYMF	5312276
YP_001320023.1	CDS	Amet_2206	NC_009633.1	2289321	2290499	D	Required for the synthesis of the thiazole moiety; thiamine biosynthesis protein ThiI	2289321..2290499	Alkaliphilus metalliredigens QYMF	5312277
YP_001320024.1	CDS	Amet_2207	NC_009633.1	2290520	2290999	D	TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; KEGG: cac:CAC1992 molybdenum cofactor biosynthesis enzyme, MoaC; molybdenum cofactor biosynthesis protein C	2290520..2290999	Alkaliphilus metalliredigens QYMF	5312278
YP_001320025.1	CDS	Amet_2208	NC_009633.1	2291114	2291620	R	TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; KEGG: mta:Moth_2132 molybdopterin binding domain; molybdenum cofactor synthesis domain-containing protein	complement(2291114..2291620)	Alkaliphilus metalliredigens QYMF	5312279
YP_001320026.1	CDS	Amet_2209	NC_009633.1	2291762	2292109	D	PFAM: membrane protein of unknown function; KEGG: pna:Pnap_3918 membrane protein of unknown function; hypothetical protein	2291762..2292109	Alkaliphilus metalliredigens QYMF	5312280
YP_001320027.1	CDS	Amet_2210	NC_009633.1	2292119	2292865	R	TIGRFAM: pyruvate formate-lyase activating enzyme; PFAM: Radical SAM domain protein; KEGG: btk:BT9727_0425 formate acetyltransferase activating enzyme (pyruvate formate-lyase activating enzyme); pyruvate formate-lyase activating enzyme	complement(2292119..2292865)	Alkaliphilus metalliredigens QYMF	5312281
YP_001320028.1	CDS	Amet_2211	NC_009633.1	2292979	2295213	R	TIGRFAM: formate acetyltransferase; PFAM: formate C-acetyltransferase glycine radical; pyruvate formate-lyase, PFL; KEGG: cya:CYA_0477 formate acetyltransferase; formate acetyltransferase	complement(2292979..2295213)	Alkaliphilus metalliredigens QYMF	5312282
YP_001320029.1	CDS	Amet_2212	NC_009633.1	2295499	2295834	D	TIGRFAM: anti-anti-sigma factor; Anti-sigma F factor antagonist; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: cpr:CPR_2022 anti-sigma F factor antagonist; anti-sigma-factor antagonist	2295499..2295834	Alkaliphilus metalliredigens QYMF	5312283
YP_001320030.1	CDS	Amet_2213	NC_009633.1	2295849	2296286	D	binds to sigma F preventing its association with RNA polymerase during sporulation; anti-sigma F factor	2295849..2296286	Alkaliphilus metalliredigens QYMF	5312284
YP_001320031.1	CDS	Amet_2214	NC_009633.1	2296296	2297072	D	TIGRFAM: RNA polymerase sigma-F type; RNA polymerase sigma-70; RNA polymerase sigma-B/F/G type; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: ctc:CTC02246 RNA polymerase sigma-F factor; FliA/WhiG family RNA polymerase sigma factor	2296296..2297072	Alkaliphilus metalliredigens QYMF	5312285
YP_001320032.1	CDS	Amet_2215	NC_009633.1	2297164	2297346	D	hypothetical protein	2297164..2297346	Alkaliphilus metalliredigens QYMF	5312286
YP_001320033.1	CDS	Amet_2216	NC_009633.1	2297387	2297968	D	KEGG: bce:BC4070 stage V sporulation protein AA; stage V sporulation protein AA	2297387..2297968	Alkaliphilus metalliredigens QYMF	5312287
YP_001320034.1	CDS	Amet_2217	NC_009633.1	2297961	2298371	D	KEGG: bce:BC4069 stage V sporulation protein AB; stage V sporulation protein AB	2297961..2298371	Alkaliphilus metalliredigens QYMF	5312288
YP_001320035.1	CDS	Amet_2218	NC_009633.1	2298412	2298570	D	hypothetical protein	2298412..2298570	Alkaliphilus metalliredigens QYMF	5312289
YP_001320036.1	CDS	Amet_2219	NC_009633.1	2298589	2299044	D	TIGRFAM: Sporulation stage V, protein AC; PFAM: SpoVA protein; KEGG: tte:TTE1319 spore formation protein spoVAC; sporulation stage V, protein AC	2298589..2299044	Alkaliphilus metalliredigens QYMF	5312290
YP_001320037.1	CDS	Amet_2220	NC_009633.1	2299053	2300078	D	PFAM: Stage V sporulation AD family protein; KEGG: tte:TTE1320 spore formation protein spoVAD; stage V sporulation protein AD	2299053..2300078	Alkaliphilus metalliredigens QYMF	5312291
YP_001320038.1	CDS	Amet_2221	NC_009633.1	2300099	2300455	D	TIGRFAM: Sporulation stage V, protein AE; PFAM: SpoVA protein; KEGG: cno:NT01CX_1809 stage V sporulation protein AE; sporulation stage V, protein AE	2300099..2300455	Alkaliphilus metalliredigens QYMF	5312292
YP_001320039.1	CDS	Amet_2222	NC_009633.1	2300468	2301037	D	KEGG: sth:STH1811 stage V sporulation protein AE; stage V sporulation protein AE	2300468..2301037	Alkaliphilus metalliredigens QYMF	5312293
YP_001320040.1	CDS	Amet_2223	NC_009633.1	2301167	2303794	R	TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; KEGG: cth:Cthe_1760 penicillin-binding protein, 1A family; 1A family penicillin-binding protein	complement(2301167..2303794)	Alkaliphilus metalliredigens QYMF	5312294
YP_001320041.1	CDS	Amet_2224	NC_009633.1	2304047	2304724	D	TIGRFAM: Sporulation protein YunB; KEGG: tte:TTE1683 hypothetical protein; sporulation protein YunB	2304047..2304724	Alkaliphilus metalliredigens QYMF	5312295
YP_001320042.1	CDS	Amet_2225	NC_009633.1	2304856	2306145	D	PFAM: GTP-binding protein, HSR1-related; KEGG: cac:CAC2299 predicted GTPase, HflX; HSR1-like GTP-binding protein	2304856..2306145	Alkaliphilus metalliredigens QYMF	5312296
YP_001320043.1	CDS	Amet_2226	NC_009633.1	2306172	2306852	D	PFAM: PBS lyase HEAT domain protein repeat-containing protein; KEGG: cno:NT01CX_1817 hypothetical protein; HEAT repeat-containing PBS lyase	2306172..2306852	Alkaliphilus metalliredigens QYMF	5312297
YP_001320044.1	CDS	Amet_2227	NC_009633.1	2306849	2307310	R	KEGG: cac:CAC0449 hypothetical protein; hypothetical protein	complement(2306849..2307310)	Alkaliphilus metalliredigens QYMF	5312298
YP_001320045.1	CDS	Amet_2228	NC_009633.1	2307540	2307971	D	PFAM: NUDIX hydrolase; KEGG: tte:TTE1129 NTP pyrophosphohydrolase including oxidative damage repair enzyme; NUDIX hydrolase	2307540..2307971	Alkaliphilus metalliredigens QYMF	5312299
YP_001320046.1	CDS	Amet_2229	NC_009633.1	2308045	2308695	D	PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: tte:TTE1130 hypothetical protein; hypothetical protein	2308045..2308695	Alkaliphilus metalliredigens QYMF	5312300
YP_001320047.1	CDS	Amet_2230	NC_009633.1	2308750	2309142	D	PFAM: CoA-binding domain protein; KEGG: tte:TTE1131 predicted CoA-binding protein; CoA-binding domain-containing protein	2308750..2309142	Alkaliphilus metalliredigens QYMF	5312301
YP_001320048.1	CDS	Amet_2231	NC_009633.1	2309161	2309529	R	KEGG: cth:Cthe_1214 hypothetical protein; hypothetical protein	complement(2309161..2309529)	Alkaliphilus metalliredigens QYMF	5312302
YP_001320049.1	CDS	Amet_2232	NC_009633.1	2309526	2309894	R	KEGG: cth:Cthe_1215 permease; permease	complement(2309526..2309894)	Alkaliphilus metalliredigens QYMF	5312303
YP_001320050.1	CDS	Amet_2233	NC_009633.1	2310072	2311001	D	TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein, beta subunit; KEGG: bld:BLi00089 cysteine synthetase A; RBL03196; cysteine synthase A	2310072..2311001	Alkaliphilus metalliredigens QYMF	5312304
YP_001320051.1	CDS	Amet_2234	NC_009633.1	2311198	2311941	D	TIGRFAM: NAD+ synthetase; PFAM: NAD+ synthase; KEGG: gka:GK2596 NH(3)-dependent NAD+ synthetase; NAD+ synthetase	2311198..2311941	Alkaliphilus metalliredigens QYMF	5312305
YP_001320052.1	CDS	Amet_2235	NC_009633.1	2312037	2312792	D	PFAM: protein of unknown function DUF28; KEGG: cno:NT01CX_1819 hypothetical protein; hypothetical protein	2312037..2312792	Alkaliphilus metalliredigens QYMF	5312306
YP_001320053.1	CDS	Amet_2236	NC_009633.1	2313145	2313384	D	hypothetical protein	2313145..2313384	Alkaliphilus metalliredigens QYMF	5312307
YP_001320054.1	CDS	Amet_2237	NC_009633.1	2313600	2314664	D	PFAM: phage integrase family protein; KEGG: gfo:orf943 phage integrase family protein; phage integrase family protein	2313600..2314664	Alkaliphilus metalliredigens QYMF	5312308
YP_001320055.1	CDS	Amet_2238	NC_009633.1	2314792	2315631	D	KEGG: maq:Maqu_3292 hypothetical protein; hypothetical protein	2314792..2315631	Alkaliphilus metalliredigens QYMF	5312309
YP_001320056.1	CDS	Amet_2239	NC_009633.1	2315786	2316310	D	hypothetical protein	2315786..2316310	Alkaliphilus metalliredigens QYMF	5312310
YP_001320057.1	CDS	Amet_2240	NC_009633.1	2316646	2317140	D	KEGG: bca:BCE_0425 aminoglycoside nucleotidyltransferase, putative; aminoglycoside nucleotidyltransferase	2316646..2317140	Alkaliphilus metalliredigens QYMF	5312311
YP_001320058.1	CDS	Amet_2241	NC_009633.1	2317550	2318074	D	PFAM: GCN5-related N-acetyltransferase; KEGG: cac:CAC2487 predicted acetyltransferase; N-acetyltransferase GCN5	2317550..2318074	Alkaliphilus metalliredigens QYMF	5312312
YP_001320059.1	CDS	Amet_2242	NC_009633.1	2318518	2319354	D	KEGG: cth:Cthe_3135 hypothetical protein; hypothetical protein	2318518..2319354	Alkaliphilus metalliredigens QYMF	5312313
YP_001320060.1	CDS	Amet_2243	NC_009633.1	2319701	2319967	D	hypothetical protein	2319701..2319967	Alkaliphilus metalliredigens QYMF	5312314
YP_001320061.1	CDS	Amet_2244	NC_009633.1	2320456	2320899	D	PFAM: GCN5-related N-acetyltransferase; KEGG: oih:OB0309 6'-N-acetyltransferase; N-acetyltransferase GCN5	2320456..2320899	Alkaliphilus metalliredigens QYMF	5312315
YP_001320062.1	CDS	Amet_2245	NC_009633.1	2320943	2321818	D	hypothetical protein	2320943..2321818	Alkaliphilus metalliredigens QYMF	5312316
YP_001320063.1	CDS	Amet_2246	NC_009633.1	2322146	2322568	D	hypothetical protein	2322146..2322568	Alkaliphilus metalliredigens QYMF	5312317
YP_001320064.1	CDS	Amet_2247	NC_009633.1	2322594	2322932	D	hypothetical protein	2322594..2322932	Alkaliphilus metalliredigens QYMF	5312318
YP_001320065.1	CDS	Amet_2248	NC_009633.1	2323013	2323318	D	hypothetical protein	2323013..2323318	Alkaliphilus metalliredigens QYMF	5312319
YP_001320066.1	CDS	Amet_2249	NC_009633.1	2323662	2324330	D	hypothetical protein	2323662..2324330	Alkaliphilus metalliredigens QYMF	5312320
YP_001320067.1	CDS	Amet_2250	NC_009633.1	2324681	2326015	D	KEGG: cth:Cthe_3229 transposase, IS4; hypothetical protein	2324681..2326015	Alkaliphilus metalliredigens QYMF	5312321
YP_001320068.1	CDS	Amet_2251	NC_009633.1	2326188	2326640	D	hypothetical protein	2326188..2326640	Alkaliphilus metalliredigens QYMF	5312322
YP_001320069.1	CDS	Amet_2252	NC_009633.1	2326936	2327445	D	PFAM: GCN5-related N-acetyltransferase; KEGG: tde:TDE1101 acetyltransferase, GNAT family; N-acetyltransferase GCN5	2326936..2327445	Alkaliphilus metalliredigens QYMF	5312323
YP_001320070.1	CDS	Amet_2253	NC_009633.1	2327830	2329290	R	KEGG: tte:TTE2242 transposase; transposase	complement(2327830..2329290)	Alkaliphilus metalliredigens QYMF	5312324
YP_001320071.1	CDS	Amet_2254	NC_009633.1	2329453	2330049	D	hypothetical protein	2329453..2330049	Alkaliphilus metalliredigens QYMF	5312325
YP_001320072.1	CDS	Amet_2255	NC_009633.1	2330224	2330625	D	hypothetical protein	2330224..2330625	Alkaliphilus metalliredigens QYMF	5312326
YP_001320073.1	CDS	Amet_2256	NC_009633.1	2331024	2331656	D	hypothetical protein	2331024..2331656	Alkaliphilus metalliredigens QYMF	5312327
YP_001320074.1	CDS	Amet_2257	NC_009633.1	2332155	2332349	R	PFAM: helix-turn-helix domain protein; KEGG: swo:Swol_2033 hypothetical protein; XRE family transcriptional regulator	complement(2332155..2332349)	Alkaliphilus metalliredigens QYMF	5312328
YP_001320075.1	CDS	Amet_2258	NC_009633.1	2333053	2333625	D	PFAM: GCN5-related N-acetyltransferase; KEGG: bcl:ABC1140 acetyltransferase, GNAT family; N-acetyltransferase GCN5	2333053..2333625	Alkaliphilus metalliredigens QYMF	5312329
YP_001320076.1	CDS	Amet_2259	NC_009633.1	2334113	2334844	D	hypothetical protein	2334113..2334844	Alkaliphilus metalliredigens QYMF	5312330
YP_001320077.1	CDS	Amet_2260	NC_009633.1	2334960	2335610	D	hypothetical protein	2334960..2335610	Alkaliphilus metalliredigens QYMF	5312331
YP_001320078.1	CDS	Amet_2261	NC_009633.1	2335780	2336265	D	PFAM: GCN5-related N-acetyltransferase; KEGG: bsu:BG14084 similar to hypothetical proteins from B. subtilis; N-acetyltransferase GCN5	2335780..2336265	Alkaliphilus metalliredigens QYMF	5312332
YP_001320079.1	CDS	Amet_2262	NC_009633.1	2336604	2337242	D	TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mmp:MMP0541 phosphoserine phosphatase; HAD family hydrolase	2336604..2337242	Alkaliphilus metalliredigens QYMF	5312333
YP_001320080.1	CDS	Amet_2263	NC_009633.1	2337379	2339358	D	KEGG: son:SO4644.1 hypothetical protein; hypothetical protein	2337379..2339358	Alkaliphilus metalliredigens QYMF	5312334
YP_001320081.1	CDS	Amet_2264	NC_009633.1	2339556	2339987	D	hypothetical protein	2339556..2339987	Alkaliphilus metalliredigens QYMF	5312335
YP_001320082.1	CDS	Amet_2265	NC_009633.1	2340162	2341115	D	hypothetical protein	2340162..2341115	Alkaliphilus metalliredigens QYMF	5312336
YP_001320083.1	CDS	Amet_2266	NC_009633.1	2341239	2342198	D	KEGG: shm:Shewmr7_3104 hypothetical protein; hypothetical protein	2341239..2342198	Alkaliphilus metalliredigens QYMF	5312337
YP_001320084.1	CDS	Amet_2267	NC_009633.1	2342420	2343097	D	KEGG: mgm:Mmc1_1825 hypothetical protein; hypothetical protein	2342420..2343097	Alkaliphilus metalliredigens QYMF	5312338
YP_001320085.1	CDS	Amet_2268	NC_009633.1	2343190	2344539	D	KEGG: fra:Francci3_4013 transposase, IS4; hypothetical protein	2343190..2344539	Alkaliphilus metalliredigens QYMF	5312339
YP_001320086.1	CDS	Amet_2269	NC_009633.1	2344906	2345163	D	PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: cac:CAC2475 possible 5-Nitroimidazole antibiotics resistance protein, NimA-family; pyridoxamine 5'-phosphate oxidase-like protein	2344906..2345163	Alkaliphilus metalliredigens QYMF	5312340
YP_001320087.1	CDS	Amet_2270	NC_009633.1	2345628	2345828	D	KEGG: rfe:RF_0424 excinuclease ABC, C subunit, N-terminal; excinuclease ABC subunit C, N-terminal protein	2345628..2345828	Alkaliphilus metalliredigens QYMF	5312341
YP_001320088.1	CDS	Amet_2271	NC_009633.1	2346000	2346131	D	hypothetical protein	2346000..2346131	Alkaliphilus metalliredigens QYMF	5312342
YP_001320089.1	CDS	Amet_2273	NC_009633.1	2346604	2346843	D	hypothetical protein	2346604..2346843	Alkaliphilus metalliredigens QYMF	5312344
YP_001320090.1	CDS	Amet_2274	NC_009633.1	2347157	2348071	D	PFAM: Sporulation domain protein; sporulation domain-containing protein	2347157..2348071	Alkaliphilus metalliredigens QYMF	5312345
YP_001320091.1	CDS	Amet_2275	NC_009633.1	2348090	2348446	D	KEGG: tte:TTE0885 hypothetical protein; hypothetical protein	2348090..2348446	Alkaliphilus metalliredigens QYMF	5312346
YP_001320092.1	CDS	Amet_2276	NC_009633.1	2348494	2348919	D	PFAM: ATP-binding region, ATPase domain protein; KEGG: tte:TTE0886 anti-sigma regulatory factor (Ser/Thr protein kinase); putative anti-sigma regulatory factor	2348494..2348919	Alkaliphilus metalliredigens QYMF	5312347
YP_001320093.1	CDS	Amet_2277	NC_009633.1	2348943	2349287	D	KEGG: cth:Cthe_0336 DRTGG domain containing protein; HPr kinase	2348943..2349287	Alkaliphilus metalliredigens QYMF	5312348
YP_001320094.1	CDS	Amet_2278	NC_009633.1	2349284	2350018	D	PFAM: PHP C-terminal domain protein; SMART: phosphoesterase PHP domain protein; KEGG: cth:Cthe_0337 PHP-like protein; phosphotransferase domain-containing protein	2349284..2350018	Alkaliphilus metalliredigens QYMF	5312349
YP_001320095.1	CDS	Amet_2279	NC_009633.1	2350062	2350607	D	PFAM: ATP-binding region, ATPase domain protein; KEGG: cth:Cthe_0339 histidine kinase; histidine kinase	2350062..2350607	Alkaliphilus metalliredigens QYMF	5312350
YP_001320096.1	CDS	Amet_2280	NC_009633.1	2350892	2352220	D	TIGRFAM: electron transport complex, RnfABCDGE type, C subunit; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: cno:NT01CX_1579 RnfC/NqrF; RnfABCDGE type electron transport complex subunit C	2350892..2352220	Alkaliphilus metalliredigens QYMF	5312351
YP_001320097.1	CDS	Amet_2281	NC_009633.1	2352240	2353193	D	TIGRFAM: electron transport complex, RnfABCDGE type, D subunit; PFAM: NQR2 and RnfD family protein; KEGG: ctc:CTC01020 RnfD/NqrB; RnfABCDGE type electron transport complex subunit D	2352240..2353193	Alkaliphilus metalliredigens QYMF	5312352
YP_001320098.1	CDS	Amet_2282	NC_009633.1	2353186	2353719	D	TIGRFAM: electron transport complex, RnfABCDGE type, G subunit; PFAM: FMN-binding domain protein; KEGG: ctc:CTC01021 rnfG/nqrC; RnfABCDGE type electron transport complex subunit G	2353186..2353719	Alkaliphilus metalliredigens QYMF	5312353
YP_001320099.1	CDS	Amet_2283	NC_009633.1	2353743	2354372	D	TIGRFAM: electron transport complex, RnfABCDGE type, E subunit; PFAM: RnfA-Nqr electron transport subunit; KEGG: cpe:CPE1063 probable Na-translocating NADH-quinone reductase; RnfABCDGE type electron transport complex subunit E	2353743..2354372	Alkaliphilus metalliredigens QYMF	5312354
YP_001320100.1	CDS	Amet_2284	NC_009633.1	2354376	2354966	D	TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; PFAM: RnfA-Nqr electron transport subunit; KEGG: mgm:Mmc1_0690 electron transport complex, RnfABCDGE type, A subunit; RnfABCDGE type electron transport complex subunit A	2354376..2354966	Alkaliphilus metalliredigens QYMF	5312355
YP_001320101.1	CDS	Amet_2285	NC_009633.1	2354979	2355965	D	TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Fe-S cluster domain protein; KEGG: ctc:CTC01024 rnfB/polyferredoxin; RnfABCDGE type electron transport complex subunit B	2354979..2355965	Alkaliphilus metalliredigens QYMF	5312356
YP_001320102.1	CDS	Amet_2286	NC_009633.1	2356141	2356662	D	PFAM: Heptaprenyl diphosphate synthase component I; KEGG: tte:TTE2484 hypothetical protein; heptaprenyl diphosphate synthase component I	2356141..2356662	Alkaliphilus metalliredigens QYMF	5312357
YP_001320103.1	CDS	Amet_2287	NC_009633.1	2356684	2356932	D	KEGG: tte:TTE0895 hypothetical protein; hypothetical protein	2356684..2356932	Alkaliphilus metalliredigens QYMF	5312358
YP_001320104.1	CDS	Amet_2288	NC_009633.1	2356941	2357519	D	TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: cth:Cthe_0087 maf protein; maf protein	2356941..2357519	Alkaliphilus metalliredigens QYMF	5312359
YP_001320105.1	CDS	radC	NC_009633.1	2357544	2358242	D	Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC	2357544..2358242	Alkaliphilus metalliredigens QYMF	5312360
YP_001320106.1	CDS	Amet_2290	NC_009633.1	2358271	2359302	D	functions in MreBCD complex in some organisms; rod shape-determining protein MreB	2358271..2359302	Alkaliphilus metalliredigens QYMF	5312361
YP_001320107.1	CDS	Amet_2291	NC_009633.1	2359318	2360160	D	in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC	2359318..2360160	Alkaliphilus metalliredigens QYMF	5312362
YP_001320108.1	CDS	Amet_2292	NC_009633.1	2360162	2360659	D	KEGG: tte:TTE0900 hypothetical protein; hypothetical protein	2360162..2360659	Alkaliphilus metalliredigens QYMF	5312363
YP_001320109.1	CDS	Amet_2293	NC_009633.1	2360676	2363528	D	PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; KEGG: tte:TTE0901 cell division protein FtsI/penicillin-binding protein 2; penicillin-binding protein, transpeptidase	2360676..2363528	Alkaliphilus metalliredigens QYMF	5312364
YP_001320110.1	CDS	Amet_2294	NC_009633.1	2363666	2364298	D	TIGRFAM: septum site-determining protein MinC; PFAM: Septum formation inhibitor MinC; KEGG: tte:TTE0902 septum formation inhibitor; septum site-determining protein MinC	2363666..2364298	Alkaliphilus metalliredigens QYMF	5312365
YP_001320111.1	CDS	Amet_2295	NC_009633.1	2364324	2365121	D	TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: cth:Cthe_0093 septum site-determining protein MinD; septum site-determining protein MinD	2364324..2365121	Alkaliphilus metalliredigens QYMF	5312366
YP_001320112.1	CDS	Amet_2296	NC_009633.1	2365141	2365425	D	works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; cell division topological specificity factor MinE	2365141..2365425	Alkaliphilus metalliredigens QYMF	5312367
YP_001320113.1	CDS	Amet_2297	NC_009633.1	2365443	2365847	D	TIGRFAM: methylglyoxal synthase; PFAM: MGS domain protein; KEGG: oih:OB1767 methylglyoxal synthase; methylglyoxal synthase	2365443..2365847	Alkaliphilus metalliredigens QYMF	5312368
YP_001320114.1	CDS	Amet_2298	NC_009633.1	2366061	2366756	D	PFAM: peptidase M23B; KEGG: cth:Cthe_0097 peptidase M23B; peptidase M23B	2366061..2366756	Alkaliphilus metalliredigens QYMF	5312369
YP_001320115.1	CDS	Amet_2299	NC_009633.1	2366784	2367701	D	PFAM: peptidase M50; KEGG: tte:TTE0908 Zn-dependent protease; peptidase M50	2366784..2367701	Alkaliphilus metalliredigens QYMF	5312370
YP_001320116.1	CDS	Amet_2300	NC_009633.1	2367780	2369621	D	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cth:Cthe_0156 radical SAM; radical SAM domain-containing protein	2367780..2369621	Alkaliphilus metalliredigens QYMF	5312371
YP_001320117.1	CDS	Amet_2301	NC_009633.1	2369618	2370358	D	KEGG: dsy:DSY3168 hypothetical protein; hypothetical protein	2369618..2370358	Alkaliphilus metalliredigens QYMF	5312372
YP_001320118.1	CDS	Amet_2302	NC_009633.1	2370370	2371872	D	TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: cth:Cthe_0158 ribonuclease, Rne/Rng family; ribonuclease	2370370..2371872	Alkaliphilus metalliredigens QYMF	5312373
YP_001320119.1	CDS	rplU	NC_009633.1	2372001	2372312	D	PFAM: ribosomal protein L21; KEGG: cpr:CPR_2097 ribosomal protein L21; 50S ribosomal protein L21	2372001..2372312	Alkaliphilus metalliredigens QYMF	5312374
YP_001320120.1	CDS	Amet_2304	NC_009633.1	2372323	2372655	D	PFAM: protein of unknown function DUF464; KEGG: tte:TTE0914 predicted ribosomal protein; hypothetical protein	2372323..2372655	Alkaliphilus metalliredigens QYMF	5312375
YP_001320121.1	CDS	rpmA	NC_009633.1	2372659	2372955	D	involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27	2372659..2372955	Alkaliphilus metalliredigens QYMF	5312376
YP_001320122.1	CDS	Amet_2306	NC_009633.1	2373112	2373687	D	KEGG: ctc:CTC02057 hypothetical protein; signal transduction histidine kinase regulating citrate/malate metabolism	2373112..2373687	Alkaliphilus metalliredigens QYMF	5312377
YP_001320123.1	CDS	Amet_2307	NC_009633.1	2373829	2375112	D	TIGRFAM: small GTP-binding protein; GTP-binding protein Obg/CgtA; PFAM: GTP-binding protein, HSR1-related; GTP1/OBG sub domain protein; GTP1/OBG-like; KEGG: cth:Cthe_0163 GTP1/OBG subdomain containing protein; GTP-binding protein Obg/CgtA	2373829..2375112	Alkaliphilus metalliredigens QYMF	5312378
YP_001320124.1	CDS	Amet_2308	NC_009633.1	2375169	2375510	D	PFAM: protein of unknown function UPF0044; KEGG: cth:Cthe_0164 protein of unknown function UPF0044; hypothetical protein	2375169..2375510	Alkaliphilus metalliredigens QYMF	5312379
YP_001320125.1	CDS	Amet_2309	NC_009633.1	2375714	2376406	D	TIGRFAM: cytidyltransferase-related domain; nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase; KEGG: tte:TTE0918 nicotinate-nucleotide adenylyltransferase; nicotinate (nicotinamide) nucleotide adenylyltransferase	2375714..2376406	Alkaliphilus metalliredigens QYMF	5312380
YP_001320126.1	CDS	Amet_2310	NC_009633.1	2376399	2376974	D	PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: cpe:CPE2124 hypothetical protein; metal dependent phosphohydrolase	2376399..2376974	Alkaliphilus metalliredigens QYMF	5312381
YP_001320127.1	CDS	Amet_2311	NC_009633.1	2377020	2378183	D	TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: tte:TTE0920 transcriptional regulator; cell envelope-related transcriptional attenuator	2377020..2378183	Alkaliphilus metalliredigens QYMF	5312382
YP_001320128.1	CDS	Amet_2312	NC_009633.1	2378481	2379485	D	TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; KEGG: mbu:Mbur_0831 K+-dependent Na+/Ca+ exchanger related-protein; CaCA family Na(+)/Ca(+) antiporter	2378481..2379485	Alkaliphilus metalliredigens QYMF	5312383
YP_001320129.1	CDS	Amet_2313	NC_009633.1	2379507	2379875	D	TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: cth:Cthe_1238 iojap-like protein; iojap family protein	2379507..2379875	Alkaliphilus metalliredigens QYMF	5312384
YP_001320130.1	CDS	Amet_2314	NC_009633.1	2380216	2382690	D	TIGRFAM: leucyl-tRNA synthetase; KEGG: cth:Cthe_1237 leucyl-tRNA synthetase; leucyl-tRNA synthetase	2380216..2382690	Alkaliphilus metalliredigens QYMF	5312385
YP_001320131.1	CDS	Amet_2315	NC_009633.1	2382701	2383348	D	PFAM: YheO domain protein; KEGG: tte:TTE0922 hypothetical protein; YheO domain-containing protein	2382701..2383348	Alkaliphilus metalliredigens QYMF	5312386
YP_001320132.1	CDS	Amet_2316	NC_009633.1	2383370	2383750	D	TIGRFAM: putative endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: fnu:FN1973 translation initiation inhibitor; putative endoribonuclease L-PSP	2383370..2383750	Alkaliphilus metalliredigens QYMF	5312387
YP_001320133.1	CDS	Amet_2317	NC_009633.1	2383901	2384569	D	TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, beta subunit; PFAM: amino acid-binding ACT domain protein; serine dehydratase beta chain; KEGG: cpf:CPF_2959 L-serine dehydratase, iron-sulfur-dependent, beta subunit; L-serine dehydratase, iron-sulfur-dependent subunit beta	2383901..2384569	Alkaliphilus metalliredigens QYMF	5312388
YP_001320134.1	CDS	Amet_2318	NC_009633.1	2384592	2385467	D	TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, alpha subunit; PFAM: serine dehydratase alpha chain; KEGG: ctc:CTC01982 L-serine dehydratase alpha subunit; L-serine dehydratase, iron-sulfur-dependent subunit alpha	2384592..2385467	Alkaliphilus metalliredigens QYMF	5312389
YP_001320135.1	CDS	Amet_2319	NC_009633.1	2385512	2386837	R	PFAM: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: tte:TTE0925 D-alanyl-D-alanine carboxypeptidase; serine-type D-Ala-D-Ala carboxypeptidase	complement(2385512..2386837)	Alkaliphilus metalliredigens QYMF	5312390
YP_001320136.1	CDS	Amet_2320	NC_009633.1	2387010	2387639	D	TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; SMART: Helix-hairpin-helix DNA-binding, class 1; KEGG: chy:CHY_0402 competence protein; helix-hairpin-helix repeat-containing competence protein ComEA	2387010..2387639	Alkaliphilus metalliredigens QYMF	5312391
YP_001320137.1	CDS	Amet_2321	NC_009633.1	2387745	2388704	D	TIGRFAM: selenide, water dikinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: cpf:CPF_2374 selenide, water dikinase; selenide, water dikinase	2387745..2388704	Alkaliphilus metalliredigens QYMF	5312392
YP_001320138.1	CDS	Amet_2322	NC_009633.1	2388778	2390160	R	TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: hha:Hhal_0607 amino acid carrier protein; amino acid carrier protein	complement(2388778..2390160)	Alkaliphilus metalliredigens QYMF	5312393
YP_001320139.1	CDS	Amet_2323	NC_009633.1	2390749	2392152	D	catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis; selenocysteine synthase	2390749..2392152	Alkaliphilus metalliredigens QYMF	5312394
YP_001320140.1	CDS	Amet_2324	NC_009633.1	2392164	2394059	D	TIGRFAM: selenocysteine-specific translation elongation factor; small GTP-binding protein; PFAM: protein synthesis factor, GTP-binding; elongation factor Tu, domain 2 protein; Elongation factor SelB, winged helix 2; Elongation factor SelB, winged helix 3; KEGG: tte:TTE1871 Selenocysteine-specific translation elongation factor; selenocysteine-specific translation elongation factor	2392164..2394059	Alkaliphilus metalliredigens QYMF	5312395
YP_001320141.1	CDS	Amet_2325	NC_009633.1	2394098	2394787	D	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sth:STH2007 two-component response regulator; two component transcriptional regulator	2394098..2394787	Alkaliphilus metalliredigens QYMF	5312396
YP_001320142.1	CDS	Amet_2326	NC_009633.1	2394852	2396207	D	PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; KEGG: tte:TTE0482 sensory transduction histidine kinase; histidine kinase	2394852..2396207	Alkaliphilus metalliredigens QYMF	5312397
YP_001320143.1	CDS	Amet_2327	NC_009633.1	2396236	2397093	D	KEGG: cth:Cthe_2543 spore germination protein-like protein; hypothetical protein	2396236..2397093	Alkaliphilus metalliredigens QYMF	5312398
YP_001320144.1	CDS	Amet_2331	NC_009633.1	2398356	2399375	D	PFAM: alpha/beta hydrolase fold; KEGG: pna:Pnap_3165 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein	2398356..2399375	Alkaliphilus metalliredigens QYMF	5312402
YP_001320145.1	CDS	Amet_2332	NC_009633.1	2400453	2401199	D	TIGRFAM: tRNA pseudouridine synthase A; PFAM: tRNA pseudouridine synthase; KEGG: btl:BALH_0426 tRNA pseudouridine synthase A; tRNA pseudouridine synthase A	2400453..2401199	Alkaliphilus metalliredigens QYMF	5312404
YP_001320146.1	CDS	Amet_2333	NC_009633.1	2401337	2401804	D	PFAM: ferric-uptake regulator; KEGG: bha:BH1396 transcriptional regulator (Fur family); ferric uptake regulator family protein	2401337..2401804	Alkaliphilus metalliredigens QYMF	5312405
YP_001320147.1	CDS	Amet_2334	NC_009633.1	2401834	2402034	R	PFAM: protein of unknown function DUF378; KEGG: cth:Cthe_2074 protein of unknown function DUF378; hypothetical protein	complement(2401834..2402034)	Alkaliphilus metalliredigens QYMF	5312406
YP_001320148.1	CDS	Amet_2335	NC_009633.1	2402674	2403870	D	hypothetical protein	2402674..2403870	Alkaliphilus metalliredigens QYMF	5312407
YP_001320149.1	CDS	Amet_2336	NC_009633.1	2403923	2404600	D	KEGG: tte:TTE1137 hypothetical protein; hypothetical protein	2403923..2404600	Alkaliphilus metalliredigens QYMF	5312408
YP_001320150.1	CDS	ruvC	NC_009633.1	2404808	2405302	D	endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase	2404808..2405302	Alkaliphilus metalliredigens QYMF	5312409
YP_001320151.1	CDS	ruvA	NC_009633.1	2405326	2405910	D	plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA	2405326..2405910	Alkaliphilus metalliredigens QYMF	5312410
YP_001320152.1	CDS	ruvB	NC_009633.1	2405925	2406935	D	promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB	2405925..2406935	Alkaliphilus metalliredigens QYMF	5312411
YP_001320153.1	CDS	Amet_2340	NC_009633.1	2407022	2408743	D	TIGRFAM: SpoIID/LytB domain protein; PFAM: Sporulation domain protein; Stage II sporulation D domain protein; KEGG: cth:Cthe_0960 SpoIID/LytB domain protein containing protein; SpoIID/LytB domain-containing protein	2407022..2408743	Alkaliphilus metalliredigens QYMF	5312412
YP_001320154.1	CDS	Amet_2341	NC_009633.1	2408751	2409776	D	TIGRFAM: S-adenosylmethionine--tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein; KEGG: ctc:CTC02210 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; S-adenosylmethionine--tRNA-ribosyltransferase- isomerase	2408751..2409776	Alkaliphilus metalliredigens QYMF	5312413
YP_001320155.1	CDS	Amet_2342	NC_009633.1	2409769	2410914	D	TIGRFAM: tRNA-guanine transglycosylase, various specificities; queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase; KEGG: cth:Cthe_0958 queuine tRNA-ribosyltransferase; queuine tRNA-ribosyltransferase	2409769..2410914	Alkaliphilus metalliredigens QYMF	5312414
YP_001320156.1	CDS	Amet_2343	NC_009633.1	2411036	2411299	D	TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: tte:TTE1184 Preprotein translocase subunit YajC; preprotein translocase subunit YajC	2411036..2411299	Alkaliphilus metalliredigens QYMF	5312415
YP_001320157.1	CDS	Amet_2344	NC_009633.1	2411492	2411896	D	KEGG: ctc:CTC02207 hypothetical protein; hypothetical protein	2411492..2411896	Alkaliphilus metalliredigens QYMF	5312416
YP_001320158.1	CDS	Amet_2345	NC_009633.1	2411970	2412110	D	KEGG: cth:Cthe_0907 hypothetical protein; hypothetical protein	2411970..2412110	Alkaliphilus metalliredigens QYMF	5312417
YP_001320159.1	CDS	Amet_2346	NC_009633.1	2412219	2413595	D	PFAM: Radical SAM domain protein; KEGG: cth:Cthe_0906 radical SAM; radical SAM domain-containing protein	2412219..2413595	Alkaliphilus metalliredigens QYMF	5312418
YP_001320160.1	CDS	Amet_2347	NC_009633.1	2413576	2414088	D	KEGG: cac:CAC1048 carbonic anhydrase/acetyltransferase, isoleucine patch superfamily; carbonic anhydrase	2413576..2414088	Alkaliphilus metalliredigens QYMF	5312419
YP_001320161.1	CDS	Amet_2348	NC_009633.1	2414194	2415456	D	TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecD; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: tte:TTE1188 Preprotein translocase subunit SecD; protein-export membrane protein SecD	2414194..2415456	Alkaliphilus metalliredigens QYMF	5312420
YP_001320162.1	CDS	Amet_2349	NC_009633.1	2415470	2416363	D	TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: ctc:CTC02203 protein translocase subunit secF; protein-export membrane protein SecF	2415470..2416363	Alkaliphilus metalliredigens QYMF	5312421
YP_001320163.1	CDS	Amet_2350	NC_009633.1	2416437	2418110	D	PFAM: ABC-1 domain protein; KEGG: tte:TTE1190 predicted unusual protein kinase; hypothetical protein	2416437..2418110	Alkaliphilus metalliredigens QYMF	5312422
YP_001320164.1	CDS	Amet_2351	NC_009633.1	2418189	2420714	D	TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase, RecJ domain protein; phosphoesterase, DHHA1; KEGG: cth:Cthe_1346 single-stranded-DNA-specific exonuclease RecJ; single-stranded-DNA-specific exonuclease RecJ	2418189..2420714	Alkaliphilus metalliredigens QYMF	5312423
YP_001320165.1	CDS	Amet_2352	NC_009633.1	2420716	2421228	D	catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase	2420716..2421228	Alkaliphilus metalliredigens QYMF	5312424
YP_001320166.1	CDS	Amet_2353	NC_009633.1	2421290	2423473	D	KEGG: tte:TTE1195 Guanosine polyphosphate pyrophosphohydrolases/synthetases; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase, HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase, HD region; (p)ppGpp synthetase I SpoT/RelA	2421290..2423473	Alkaliphilus metalliredigens QYMF	5312425
YP_001320167.1	CDS	Amet_2354	NC_009633.1	2423499	2423948	D	hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase	2423499..2423948	Alkaliphilus metalliredigens QYMF	5312426
YP_001320168.1	CDS	Amet_2355	NC_009633.1	2423959	2424579	D	PFAM: beta-lactamase domain protein; KEGG: mta:Moth_1678 beta-lactamase-like; beta-lactamase domain-containing protein	2423959..2424579	Alkaliphilus metalliredigens QYMF	5312427
YP_001320169.1	CDS	Amet_2356	NC_009633.1	2424697	2424879	D	hypothetical protein	2424697..2424879	Alkaliphilus metalliredigens QYMF	5312428
YP_001320170.1	CDS	Amet_2357	NC_009633.1	2424895	2426403	D	catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase	2424895..2426403	Alkaliphilus metalliredigens QYMF	5312429
YP_001320171.1	CDS	hisS	NC_009633.1	2426715	2427974	D	catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase	2426715..2427974	Alkaliphilus metalliredigens QYMF	5312430
YP_001320172.1	CDS	Amet_2359	NC_009633.1	2427985	2429760	D	TIGRFAM: aspartyl-tRNA synthetase; PFAM: GAD domain protein; tRNA synthetase, class II (D, K and N); nucleic acid binding, OB-fold, tRNA/helicase-type; KEGG: cth:Cthe_1331 aspartyl-tRNA synthetase; aspartyl-tRNA synthetase	2427985..2429760	Alkaliphilus metalliredigens QYMF	5312431
YP_001320173.1	CDS	Amet_2360	NC_009633.1	2429913	2430221	D	KEGG: bha:BH0515 hypothetical protein; hypothetical protein	2429913..2430221	Alkaliphilus metalliredigens QYMF	5312432
YP_001320174.1	CDS	Amet_2361	NC_009633.1	2430495	2431298	D	PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: cth:Cthe_3110 UBA/ThiF-type NAD/FAD binding fold; UBA/THIF-type NAD/FAD binding protein	2430495..2431298	Alkaliphilus metalliredigens QYMF	5312433
YP_001320175.1	CDS	Amet_2362	NC_009633.1	2431367	2431792	D	PFAM: Positive regulator of sigma(E), RseC/MucC; KEGG: cno:NT01CX_0096 positive regulator of sigma(E), RseC/MucC superfamily; sigma E positive regulator RseC/MucC	2431367..2431792	Alkaliphilus metalliredigens QYMF	5312434
YP_001320176.1	CDS	Amet_2363	NC_009633.1	2431834	2432283	R	KEGG: ctc:CTC01017 membrane spanning protein; membrane spanning protein	complement(2431834..2432283)	Alkaliphilus metalliredigens QYMF	5312435
YP_001320177.1	CDS	Amet_2364	NC_009633.1	2432280	2433065	R	PFAM: protein of unknown function DUF1212; KEGG: cac:CAC2265 hypothetical protein; hypothetical protein	complement(2432280..2433065)	Alkaliphilus metalliredigens QYMF	5312436
YP_001320178.1	CDS	glyA	NC_009633.1	2433264	2434496	D	catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase	2433264..2434496	Alkaliphilus metalliredigens QYMF	5312437
YP_001320179.1	CDS	Amet_2366	NC_009633.1	2434682	2436109	D	TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; AAA ATPase; KEGG: bld:BLi00421 RocR; sigma-54 dependent trancsriptional regulator	2434682..2436109	Alkaliphilus metalliredigens QYMF	5312438
YP_001320180.1	CDS	Amet_2367	NC_009633.1	2436412	2437458	D	PFAM: dihydrodipicolinate reductase; KEGG: tte:TTE1234 hypothetical protein; dihydrodipicolinate reductase	2436412..2437458	Alkaliphilus metalliredigens QYMF	5312439
YP_001320181.1	CDS	Amet_2368	NC_009633.1	2437469	2437783	D	KEGG: tte:TTE1235 hypothetical protein; hypothetical protein	2437469..2437783	Alkaliphilus metalliredigens QYMF	5312440
YP_001320182.1	CDS	Amet_2369	NC_009633.1	2437773	2439200	D	PFAM: Pyridoxal-5'-phosphate-dependent protein, beta subunit; KEGG: tte:TTE1236 threonine synthase; pyridoxal-5'-phosphate-dependent protein subunit beta	2437773..2439200	Alkaliphilus metalliredigens QYMF	5312441
YP_001320183.1	CDS	Amet_2370	NC_009633.1	2439220	2439585	D	KEGG: tte:TTE1237 hypothetical protein; hypothetical protein	2439220..2439585	Alkaliphilus metalliredigens QYMF	5312442
YP_001320184.1	CDS	Amet_2371	NC_009633.1	2439585	2441795	D	PFAM: cobalamin B12-binding domain protein; D-Lysine 5,6-aminomutase alpha subunit; KEGG: tte:TTE1238 methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding); cobalamin B12-binding domain-containing protein	2439585..2441795	Alkaliphilus metalliredigens QYMF	5312443
YP_001320185.1	CDS	Amet_2372	NC_009633.1	2441785	2443149	D	KEGG: tte:TTE1239 methylaspartate mutase; methylaspartate mutase	2441785..2443149	Alkaliphilus metalliredigens QYMF	5312444
YP_001320186.1	CDS	Amet_2373	NC_009633.1	2443139	2444233	D	PFAM: alanine racemase domain protein; KEGG: ppr:PBPRB0280 hypothetical protein; alanine racemase domain-containing protein	2443139..2444233	Alkaliphilus metalliredigens QYMF	5312445
YP_001320187.1	CDS	Amet_2374	NC_009633.1	2444300	2445310	D	hypothetical protein	2444300..2445310	Alkaliphilus metalliredigens QYMF	5312446
YP_001320188.1	CDS	Amet_2375	NC_009633.1	2445411	2445833	R	KEGG: gga:396469 myosin, heavy chain 9, non-muscle; hypothetical protein	complement(2445411..2445833)	Alkaliphilus metalliredigens QYMF	5312447
YP_001320189.1	CDS	Amet_2376	NC_009633.1	2445808	2446863	R	KEGG: tte:TTE1676 hypothetical protein; hypothetical protein	complement(2445808..2446863)	Alkaliphilus metalliredigens QYMF	5312448
YP_001320190.1	CDS	Amet_2377	NC_009633.1	2447091	2448680	R	PFAM: Resolvase, N-terminal domain; Recombinase; KEGG: cac:CAC1956 site-specific recombinases, DNA invertase Pin homolog; resolvase domain-containing protein	complement(2447091..2448680)	Alkaliphilus metalliredigens QYMF	5312449
YP_001320191.1	CDS	Amet_2378	NC_009633.1	2449333	2449704	D	hypothetical protein	2449333..2449704	Alkaliphilus metalliredigens QYMF	5312450
YP_001320192.1	CDS	Amet_2379	NC_009633.1	2450045	2450680	D	KEGG: spu:578289 hypothetical LOC578289; hypothetical protein	2450045..2450680	Alkaliphilus metalliredigens QYMF	5312451
YP_001320193.1	CDS	Amet_2380	NC_009633.1	2451495	2452295	D	hypothetical protein	2451495..2452295	Alkaliphilus metalliredigens QYMF	5312452
YP_001320194.1	CDS	Amet_2381	NC_009633.1	2452953	2454239	D	KEGG: smu:SMU.58 hypothetical protein; hypothetical protein	2452953..2454239	Alkaliphilus metalliredigens QYMF	5312453
YP_001320195.1	CDS	Amet_2382	NC_009633.1	2454773	2455861	D	PFAM: AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: cno:NT01CX_2156 ATPase AAA-like protein; ATPase central domain-containing protein	2454773..2455861	Alkaliphilus metalliredigens QYMF	5312454
YP_001320196.1	CDS	Amet_2383	NC_009633.1	2455873	2458221	D	KEGG: cno:NT01CX_2155 hypothetical protein; hypothetical protein	2455873..2458221	Alkaliphilus metalliredigens QYMF	5312455
YP_001320197.1	CDS	Amet_2384	NC_009633.1	2458284	2458736	R	hypothetical protein	complement(2458284..2458736)	Alkaliphilus metalliredigens QYMF	5312456
YP_001320198.1	CDS	Amet_2385	NC_009633.1	2458729	2459220	R	hypothetical protein	complement(2458729..2459220)	Alkaliphilus metalliredigens QYMF	5312457
YP_001320199.1	CDS	Amet_2386	NC_009633.1	2459439	2459993	R	PFAM: protein of unknown function DUF955; hypothetical protein	complement(2459439..2459993)	Alkaliphilus metalliredigens QYMF	5312458
YP_001320200.1	CDS	Amet_2387	NC_009633.1	2460005	2460688	R	hypothetical protein	complement(2460005..2460688)	Alkaliphilus metalliredigens QYMF	5312459
YP_001320201.1	CDS	Amet_2388	NC_009633.1	2460779	2461072	D	hypothetical protein	2460779..2461072	Alkaliphilus metalliredigens QYMF	5312460
YP_001320202.1	CDS	Amet_2389	NC_009633.1	2461108	2461374	D	PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator	2461108..2461374	Alkaliphilus metalliredigens QYMF	5312461
YP_001320203.1	CDS	Amet_2390	NC_009633.1	2461386	2461814	D	hypothetical protein	2461386..2461814	Alkaliphilus metalliredigens QYMF	5312462
YP_001320204.1	CDS	Amet_2391	NC_009633.1	2461858	2462037	D	hypothetical protein	2461858..2462037	Alkaliphilus metalliredigens QYMF	5312463
YP_001320205.1	CDS	Amet_2392	NC_009633.1	2462301	2462570	D	XRE family transcriptional regulator	2462301..2462570	Alkaliphilus metalliredigens QYMF	5312464
YP_001320206.1	CDS	Amet_2393	NC_009633.1	2462585	2462965	D	hypothetical protein	2462585..2462965	Alkaliphilus metalliredigens QYMF	5312465
YP_001320207.1	CDS	Amet_2394	NC_009633.1	2462977	2463093	D	hypothetical protein	2462977..2463093	Alkaliphilus metalliredigens QYMF	5312466
YP_001320208.1	CDS	Amet_2395	NC_009633.1	2463166	2463492	D	hypothetical protein	2463166..2463492	Alkaliphilus metalliredigens QYMF	5312467
YP_001320209.1	CDS	Amet_2396	NC_009633.1	2463555	2464295	D	hypothetical protein	2463555..2464295	Alkaliphilus metalliredigens QYMF	5312468
YP_001320210.1	CDS	Amet_2397	NC_009633.1	2464433	2464912	D	KEGG: bcl:ABC2854 phage replication protein; phage replication protein	2464433..2464912	Alkaliphilus metalliredigens QYMF	5312469
YP_001320211.1	CDS	Amet_2398	NC_009633.1	2464986	2465357	D	KEGG: ajs:Ajs_0930 hypothetical protein; hypothetical protein	2464986..2465357	Alkaliphilus metalliredigens QYMF	5312470
YP_001320212.1	CDS	Amet_2399	NC_009633.1	2465347	2465517	D	hypothetical protein	2465347..2465517	Alkaliphilus metalliredigens QYMF	5312471
YP_001320213.1	CDS	Amet_2400	NC_009633.1	2465638	2465931	D	hypothetical protein	2465638..2465931	Alkaliphilus metalliredigens QYMF	5312472
YP_001320214.1	CDS	Amet_2401	NC_009633.1	2465951	2466172	D	hypothetical protein	2465951..2466172	Alkaliphilus metalliredigens QYMF	5312473
YP_001320215.1	CDS	Amet_2402	NC_009633.1	2466184	2466375	D	hypothetical protein	2466184..2466375	Alkaliphilus metalliredigens QYMF	5312474
YP_001320216.1	CDS	Amet_2403	NC_009633.1	2466451	2466927	R	hypothetical protein	complement(2466451..2466927)	Alkaliphilus metalliredigens QYMF	5312475
YP_001320217.1	CDS	Amet_2404	NC_009633.1	2467042	2467227	R	PFAM: small acid-soluble spore protein, alpha/beta type; alpha/beta type small acid-soluble spore protein	complement(2467042..2467227)	Alkaliphilus metalliredigens QYMF	5312476
YP_001320218.1	CDS	Amet_2405	NC_009633.1	2467763	2468236	D	KEGG: cac:CAC0550 possible sigma factor; putative sigma factor	2467763..2468236	Alkaliphilus metalliredigens QYMF	5312477
YP_001320219.1	CDS	Amet_2406	NC_009633.1	2468752	2469198	D	PFAM: Peptidoglycan-binding domain 1 protein; KEGG: dsy:DSY1553 hypothetical protein; peptidoglycan binding domain-containing protein	2468752..2469198	Alkaliphilus metalliredigens QYMF	5312478
YP_001320220.1	CDS	Amet_2407	NC_009633.1	2469286	2469894	D	PFAM: phage integrase family protein; KEGG: bat:BAS3811 prophage LambdaBa02, site-specific recombinase, phage integrase family; phage integrase family protein	2469286..2469894	Alkaliphilus metalliredigens QYMF	5312479
YP_001320221.1	CDS	Amet_2408	NC_009633.1	2470253	2470903	D	KEGG: bld:BLi01463 YqaS; YqaS	2470253..2470903	Alkaliphilus metalliredigens QYMF	5312480
YP_001320222.1	CDS	Amet_2409	NC_009633.1	2470905	2471585	D	KEGG: bat:BAS0440 prophage LambdaBa04, GP54; hypothetical protein	2470905..2471585	Alkaliphilus metalliredigens QYMF	5312481
YP_001320223.1	CDS	Amet_2410	NC_009633.1	2471689	2472015	D	KEGG: bat:BAS0442 hypothetical protein; hypothetical protein	2471689..2472015	Alkaliphilus metalliredigens QYMF	5312482
YP_001320224.1	CDS	Amet_2411	NC_009633.1	2472024	2473757	D	PFAM: phage Terminase; KEGG: bat:BAS0443 prophage LambdaBa04, terminase, large subunit, putative; phage terminase	2472024..2473757	Alkaliphilus metalliredigens QYMF	5312483
YP_001320225.1	CDS	Amet_2412	NC_009633.1	2473940	2475181	D	PFAM: phage portal protein; KEGG: bcz:BCZK3426 phage-related, head portal protein; phage portal protein	2473940..2475181	Alkaliphilus metalliredigens QYMF	5312484
YP_001320226.1	CDS	Amet_2413	NC_009633.1	2475174	2475824	D	TIGRFAM: phage prohead protease, HK97 family; PFAM: peptidase U35, phage prohead HK97; KEGG: lla:L55698 prophage pi2 protein 32; HK97 family phage prohead protease	2475174..2475824	Alkaliphilus metalliredigens QYMF	5312485
YP_001320227.1	CDS	Amet_2414	NC_009633.1	2475835	2477124	D	KEGG: bcz:BCZK3424 group-specific protein; possible phage major capsid protein; putative major capsid protein	2475835..2477124	Alkaliphilus metalliredigens QYMF	5312486
YP_001320228.1	CDS	Amet_2415	NC_009633.1	2477187	2477369	D	hypothetical protein	2477187..2477369	Alkaliphilus metalliredigens QYMF	5312487
YP_001320229.1	CDS	Amet_2416	NC_009633.1	2477369	2477650	D	TIGRFAM: uncharacterized phage protein (possible DNA packaging); KEGG: cpr:CPR_C0011 uncharacterized phage protein (possible DNA packaging); phage protein	2477369..2477650	Alkaliphilus metalliredigens QYMF	5312488
YP_001320230.1	CDS	Amet_2417	NC_009633.1	2477647	2477976	D	TIGRFAM: phage head-tail adaptor, putative; phage head-tail adaptor	2477647..2477976	Alkaliphilus metalliredigens QYMF	5312489
YP_001320231.1	CDS	Amet_2418	NC_009633.1	2477976	2478407	D	KEGG: ctc:CTC02127 hypothetical protein; hypothetical protein	2477976..2478407	Alkaliphilus metalliredigens QYMF	5312490
YP_001320232.1	CDS	Amet_2419	NC_009633.1	2478412	2478831	D	hypothetical protein	2478412..2478831	Alkaliphilus metalliredigens QYMF	5312491
YP_001320233.1	CDS	Amet_2420	NC_009633.1	2478838	2479893	D	KEGG: ctc:CTC02125 phage-like element pbsx protein XkdK; phage-like element pbsx protein XkdK	2478838..2479893	Alkaliphilus metalliredigens QYMF	5312492
YP_001320234.1	CDS	Amet_2421	NC_009633.1	2479909	2480352	D	KEGG: ctc:CTC02124 phage-like element pbsx protein XkdM; phage-like element pbsx protein XkdM	2479909..2480352	Alkaliphilus metalliredigens QYMF	5312493
YP_001320235.1	CDS	Amet_2422	NC_009633.1	2480355	2480762	D	hypothetical protein	2480355..2480762	Alkaliphilus metalliredigens QYMF	5312494
YP_001320236.1	CDS	Amet_2423	NC_009633.1	2480949	2481446	D	hypothetical protein	2480949..2481446	Alkaliphilus metalliredigens QYMF	5312495
YP_001320237.1	CDS	Amet_2424	NC_009633.1	2481542	2482465	D	KEGG: sha:SH1757 hypothetical protein; hypothetical protein	2481542..2482465	Alkaliphilus metalliredigens QYMF	5312496
YP_001320238.1	CDS	Amet_2425	NC_009633.1	2482693	2484132	D	KEGG: cpf:CPF_0965 hypothetical protein; hypothetical protein	2482693..2484132	Alkaliphilus metalliredigens QYMF	5312497
YP_001320239.1	CDS	Amet_2426	NC_009633.1	2484143	2484559	D	KEGG: dsy:DSY3953 hypothetical protein; hypothetical protein	2484143..2484559	Alkaliphilus metalliredigens QYMF	5312498
YP_001320240.1	CDS	Amet_2427	NC_009633.1	2484561	2485547	D	KEGG: ctc:CTC02117 phage-like element pbsx protein XkdQ; hypothetical protein	2484561..2485547	Alkaliphilus metalliredigens QYMF	5312499
YP_001320241.1	CDS	Amet_2428	NC_009633.1	2485548	2485937	D	hypothetical protein	2485548..2485937	Alkaliphilus metalliredigens QYMF	5312500
YP_001320242.1	CDS	Amet_2429	NC_009633.1	2485937	2486377	D	KEGG: ctc:CTC02116 phage-like element pbsx protein XkdS; hypothetical protein	2485937..2486377	Alkaliphilus metalliredigens QYMF	5312501
YP_001320243.1	CDS	Amet_2430	NC_009633.1	2486370	2487437	D	PFAM: Baseplate J family protein; KEGG: ctc:CTC02115 phage-like element pbsx protein XkdT; baseplate J family protein	2486370..2487437	Alkaliphilus metalliredigens QYMF	5312502
YP_001320244.1	CDS	Amet_2431	NC_009633.1	2487430	2487963	D	KEGG: ctc:CTC02112 phage-like element pbsx protein XkdT; phage-like element pbsx protein XkdT	2487430..2487963	Alkaliphilus metalliredigens QYMF	5312503
YP_001320245.1	CDS	Amet_2432	NC_009633.1	2487963	2488235	D	hypothetical protein	2487963..2488235	Alkaliphilus metalliredigens QYMF	5312504
YP_001320246.1	CDS	Amet_2433	NC_009633.1	2488235	2488864	D	hypothetical protein	2488235..2488864	Alkaliphilus metalliredigens QYMF	5312505
YP_001320247.1	CDS	Amet_2434	NC_009633.1	2488877	2489272	D	hypothetical protein	2488877..2489272	Alkaliphilus metalliredigens QYMF	5312506
YP_001320248.1	CDS	Amet_2435	NC_009633.1	2489265	2489444	D	hypothetical protein	2489265..2489444	Alkaliphilus metalliredigens QYMF	5312507
YP_001320249.1	CDS	Amet_2436	NC_009633.1	2489451	2489582	D	hypothetical protein	2489451..2489582	Alkaliphilus metalliredigens QYMF	5312508
YP_001320250.1	CDS	Amet_2437	NC_009633.1	2489629	2490072	D	TIGRFAM: toxin secretion/phage lysis holin; PFAM: Holin, toxin secretion/phage lysis; KEGG: bat:BAS3785 prophage LambdaBa02, holin, putative; toxin secretion/phage lysis holin	2489629..2490072	Alkaliphilus metalliredigens QYMF	5312509
YP_001320251.1	CDS	Amet_2438	NC_009633.1	2490069	2490791	D	PFAM: cell wall hydrolase/autolysin; KEGG: bcl:ABC2815 N-acetylmuramoyl-L-alanine amidase; cell wall hydrolase/autolysin	2490069..2490791	Alkaliphilus metalliredigens QYMF	5312510
YP_001320252.1	CDS	Amet_2439	NC_009633.1	2490968	2491216	D	hypothetical protein	2490968..2491216	Alkaliphilus metalliredigens QYMF	5312511
YP_001320253.1	CDS	Amet_2440	NC_009633.1	2491284	2492045	D	TIGRFAM: DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; KEGG: cpr:CPR_C0051 modification methylase dpniia, putative; DNA adenine methylase	2491284..2492045	Alkaliphilus metalliredigens QYMF	5312512
YP_001320254.1	CDS	Amet_2441	NC_009633.1	2492185	2492817	D	KEGG: bce:BC1265 hypothetical cytosolic protein; hypothetical protein	2492185..2492817	Alkaliphilus metalliredigens QYMF	5312513
YP_001320255.1	CDS	Amet_2442	NC_009633.1	2493150	2493923	D	hypothetical protein	2493150..2493923	Alkaliphilus metalliredigens QYMF	5312514
YP_001320256.1	CDS	Amet_2443	NC_009633.1	2494005	2494361	R	KEGG: ctc:CTC01365 membrane spanning protein; membrane spanning protein	complement(2494005..2494361)	Alkaliphilus metalliredigens QYMF	5312515
YP_001320257.1	CDS	Amet_2444	NC_009633.1	2494459	2494632	R	hypothetical protein	complement(2494459..2494632)	Alkaliphilus metalliredigens QYMF	5312516
YP_001320258.1	CDS	Amet_2445	NC_009633.1	2494936	2495982	D	PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: tte:TTE0267 Threonine aldolase; threonine aldolase	2494936..2495982	Alkaliphilus metalliredigens QYMF	5312517
YP_001320259.1	CDS	Amet_2446	NC_009633.1	2496009	2497277	D	PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; KEGG: ctc:CTC01048 ATPase associated with chromosome architecture/replication; recombination factor protein RarA	2496009..2497277	Alkaliphilus metalliredigens QYMF	5312518
YP_001320260.1	CDS	Amet_2447	NC_009633.1	2497405	2497725	D	hypothetical protein	2497405..2497725	Alkaliphilus metalliredigens QYMF	5312519
YP_001320261.1	CDS	Amet_2448	NC_009633.1	2497718	2499328	R	KEGG: tte:TTE1676 hypothetical protein; hypothetical protein	complement(2497718..2499328)	Alkaliphilus metalliredigens QYMF	5312520
YP_001320262.1	CDS	Amet_2449	NC_009633.1	2499536	2500198	D	KEGG: dsy:DSY4494 hypothetical protein; hypothetical protein	2499536..2500198	Alkaliphilus metalliredigens QYMF	5312521
YP_001320263.1	CDS	Amet_2450	NC_009633.1	2500297	2501097	R	PFAM: SCP-like extracellular protein; KEGG: bcl:ABC2540 hypothetical protein; SCP-like extracellular protein	complement(2500297..2501097)	Alkaliphilus metalliredigens QYMF	5312522
YP_001320264.1	CDS	Amet_2451	NC_009633.1	2501432	2502268	D	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; KEGG: afu:AF0323a dTDP-4-dehydrorhamnose reductas; dTDP-4-dehydrorhamnose reductase	2501432..2502268	Alkaliphilus metalliredigens QYMF	5312523
YP_001320265.1	CDS	Amet_2452	NC_009633.1	2502432	2502881	D	TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: tte:TTE1242 predicted transcriptional regulator; BadM/Rrf2 family transcriptional regulator	2502432..2502881	Alkaliphilus metalliredigens QYMF	5312524
YP_001320266.1	CDS	Amet_2453	NC_009633.1	2502922	2504109	D	PFAM: aminotransferase, class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: cpr:CPR_1755 cysteine desulfurase; class V aminotransferase	2502922..2504109	Alkaliphilus metalliredigens QYMF	5312525
YP_001320267.1	CDS	Amet_2454	NC_009633.1	2504102	2504542	D	PFAM: nitrogen-fixing NifU domain protein; KEGG: cth:Cthe_0721 nitrogen-fixing NifU-like protein; NifU domain-containing protein	2504102..2504542	Alkaliphilus metalliredigens QYMF	5312526
YP_001320268.1	CDS	Amet_2455	NC_009633.1	2504656	2505204	D	KEGG: cth:Cthe_3197 PRC-barrel domain protein; hypothetical protein	2504656..2505204	Alkaliphilus metalliredigens QYMF	5312527
YP_001320269.1	CDS	Amet_2456	NC_009633.1	2505233	2505412	D	hypothetical protein	2505233..2505412	Alkaliphilus metalliredigens QYMF	5312528
YP_001320270.1	CDS	Amet_2457	NC_009633.1	2505523	2506758	D	PFAM: protein of unknown function UPF0118; KEGG: cth:Cthe_3199 protein of unknown function UPF0118; hypothetical protein	2505523..2506758	Alkaliphilus metalliredigens QYMF	5312529
YP_001320271.1	CDS	alaS	NC_009633.1	2507054	2509735	D	Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase	2507054..2509735	Alkaliphilus metalliredigens QYMF	5312530
YP_001320272.1	CDS	Amet_2459	NC_009633.1	2509850	2510107	D	PFAM: protein of unknown function DUF965; KEGG: chy:CHY_0540 hypothetical protein; hypothetical protein	2509850..2510107	Alkaliphilus metalliredigens QYMF	5312531
YP_001320273.1	CDS	Amet_2460	NC_009633.1	2510120	2512297	D	KEGG: tte:TTE0101 hypothetical protein; hypothetical protein	2510120..2512297	Alkaliphilus metalliredigens QYMF	5312532
YP_001320274.1	CDS	Amet_2461	NC_009633.1	2512341	2513291	D	PFAM: aldo/keto reductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: cth:Cthe_0152 aldo/keto reductase; aldo/keto reductase	2512341..2513291	Alkaliphilus metalliredigens QYMF	5312533
YP_001320275.1	CDS	Amet_2462	NC_009633.1	2513302	2513718	D	PFAM: Holliday junction resolvase YqgF; SMART: Resolvase, RNase H domain protein fold; KEGG: ctc:CTC01056 putative Holliday junction resolvase; Holliday junction resolvase YqgF	2513302..2513718	Alkaliphilus metalliredigens QYMF	5312534
YP_001320276.1	CDS	Amet_2463	NC_009633.1	2513837	2514103	D	PFAM: protein of unknown function DUF1292; KEGG: cno:NT01CX_2277 hypothetical protein; hypothetical protein	2513837..2514103	Alkaliphilus metalliredigens QYMF	5312535
YP_001320277.1	CDS	Amet_2464	NC_009633.1	2514120	2514572	R	hypothetical protein	complement(2514120..2514572)	Alkaliphilus metalliredigens QYMF	5312536
YP_001320278.1	CDS	Amet_2465	NC_009633.1	2514670	2515368	D	PFAM: sugar fermentation stimulation protein; KEGG: ctc:CTC00070 sugar fermentation stimulation protein; sugar fermentation stimulation protein	2514670..2515368	Alkaliphilus metalliredigens QYMF	5312537
YP_001320279.1	CDS	Amet_2466	NC_009633.1	2515471	2515905	D	PFAM: ferric-uptake regulator; KEGG: cpf:CPF_2029 transcriptional regulator, Fur family; ferric uptake regulator family protein	2515471..2515905	Alkaliphilus metalliredigens QYMF	5312538
YP_001320280.1	CDS	Amet_2467	NC_009633.1	2516137	2517801	D	PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: tte:TTE1253 predicted hydrolase of the metallo-beta-lactamase superfamily; beta-lactamase domain-containing protein	2516137..2517801	Alkaliphilus metalliredigens QYMF	5312539
YP_001320281.1	CDS	Amet_2468	NC_009633.1	2517897	2518202	D	KEGG: dsy:DSY3973 hypothetical protein; hypothetical protein	2517897..2518202	Alkaliphilus metalliredigens QYMF	5312540
YP_001320282.1	CDS	Amet_2469	NC_009633.1	2518192	2518785	D	PFAM: protein of unknown function DUF340, membrane; KEGG: fnu:FN1083 putative surface protein; hypothetical protein	2518192..2518785	Alkaliphilus metalliredigens QYMF	5312541
YP_001320283.1	CDS	Amet_2470	NC_009633.1	2519026	2519673	D	PFAM: O-methyltransferase, family 3; Methyltransferase type 11; KEGG: cth:Cthe_1009 O-methyltransferase, family 3; O-methyltransferase family protein	2519026..2519673	Alkaliphilus metalliredigens QYMF	5312542
YP_001320284.1	CDS	Amet_2471	NC_009633.1	2519688	2520929	D	PFAM: peptidase U32; KEGG: cth:Cthe_1010 peptidase U32; peptidase U32	2519688..2520929	Alkaliphilus metalliredigens QYMF	5312543
YP_001320285.1	CDS	Amet_2472	NC_009633.1	2520922	2521548	D	TIGRFAM: uridine kinase; PFAM: phosphoribulokinase/uridine kinase; KEGG: cno:NT01CX_2269 uridine kinase; uridine kinase	2520922..2521548	Alkaliphilus metalliredigens QYMF	5312544
YP_001320286.1	CDS	Amet_2473	NC_009633.1	2521621	2523306	D	PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; KEGG: cth:Cthe_1011 peptidoglycan glycosyltransferase; peptidoglycan glycosyltransferase	2521621..2523306	Alkaliphilus metalliredigens QYMF	5312545
YP_001320287.1	CDS	Amet_2474	NC_009633.1	2523438	2523887	D	PFAM: sigma-70 region 2 domain protein; KEGG: cth:Cthe_1012 RNA polymerase, sigma 28 subunit; FliA/WhiG family RNA polymerase sigma factor	2523438..2523887	Alkaliphilus metalliredigens QYMF	5312546
YP_001320288.1	CDS	Amet_2475	NC_009633.1	2523797	2525383	R	PFAM: Resolvase, N-terminal domain; Recombinase; KEGG: cac:CAC1956 site-specific recombinases, DNA invertase Pin homolog; resolvase domain-containing protein	complement(2523797..2525383)	Alkaliphilus metalliredigens QYMF	5312547
YP_001320289.1	CDS	Amet_2476	NC_009633.1	2525428	2525772	D	hypothetical protein	2525428..2525772	Alkaliphilus metalliredigens QYMF	5312548
YP_001320290.1	CDS	Amet_2477	NC_009633.1	2526047	2526295	D	hypothetical protein	2526047..2526295	Alkaliphilus metalliredigens QYMF	5312549
YP_001320291.1	CDS	Amet_2478	NC_009633.1	2526383	2526595	R	KEGG: dsy:DSY3278 hypothetical protein; hypothetical protein	complement(2526383..2526595)	Alkaliphilus metalliredigens QYMF	5312550
YP_001320292.1	CDS	Amet_2480	NC_009633.1	2527436	2527789	D	PFAM: sigma-70 region 4 domain protein; KEGG: cth:Cthe_1012 RNA polymerase, sigma 28 subunit; FliA/WhiG family RNA polymerase sigma 28 subunit	2527436..2527789	Alkaliphilus metalliredigens QYMF	5312552
YP_001320293.1	CDS	Amet_2481	NC_009633.1	2528152	2528589	D	KEGG: tte:TTE0491 flagellar protein; hypothetical protein	2528152..2528589	Alkaliphilus metalliredigens QYMF	5312553
YP_001320294.1	CDS	Amet_2482	NC_009633.1	2528698	2529201	D	TIGRFAM: hydrolase, HAD-superfamily, subfamily IIIA; HAD superfamily (subfamily IIIA) phosphatase, TIGR01668; KEGG: tte:TTE1260 predicted hydrolase of the HAD superfamily; HAD family phosphatase	2528698..2529201	Alkaliphilus metalliredigens QYMF	5312554
YP_001320295.1	CDS	Amet_2483	NC_009633.1	2529740	2530174	D	KEGG: noc:Noc_2892 general secretion pathway protein H; hypothetical protein	2529740..2530174	Alkaliphilus metalliredigens QYMF	5312555
YP_001320296.1	CDS	Amet_2484	NC_009633.1	2530191	2530574	D	hypothetical protein	2530191..2530574	Alkaliphilus metalliredigens QYMF	5312556
YP_001320297.1	CDS	Amet_2485	NC_009633.1	2530634	2531161	D	hypothetical protein	2530634..2531161	Alkaliphilus metalliredigens QYMF	5312557
YP_001320298.1	CDS	Amet_2486	NC_009633.1	2531158	2531781	D	hypothetical protein	2531158..2531781	Alkaliphilus metalliredigens QYMF	5312558
YP_001320299.1	CDS	Amet_2487	NC_009633.1	2531862	2532128	D	KEGG: tte:TTE1271 hypothetical protein; hypothetical protein	2531862..2532128	Alkaliphilus metalliredigens QYMF	5312559
YP_001320300.1	CDS	Amet_2488	NC_009633.1	2532339	2532524	D	hypothetical protein	2532339..2532524	Alkaliphilus metalliredigens QYMF	5312560
YP_001320301.1	CDS	Amet_2489	NC_009633.1	2532552	2533619	D	PFAM: creatinase; peptidase M24; KEGG: tte:TTE1280 Xaa-Pro aminopeptidase; peptidase M24	2532552..2533619	Alkaliphilus metalliredigens QYMF	5312561
YP_001320302.1	CDS	Amet_2490	NC_009633.1	2533655	2534212	D	Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P	2533655..2534212	Alkaliphilus metalliredigens QYMF	5312562
YP_001320303.1	CDS	Amet_2491	NC_009633.1	2534269	2534691	D	KEGG: tte:TTE1282 hypothetical protein; hypothetical protein	2534269..2534691	Alkaliphilus metalliredigens QYMF	5312563
YP_001320304.1	CDS	Amet_2492	NC_009633.1	2534809	2535849	D	TIGRFAM: Sporulation stage III, protein AA; SMART: AAA ATPase; KEGG: cth:Cthe_0845 stage III sporulation protein spoIIIAA; sporulation stage III, protein AA	2534809..2535849	Alkaliphilus metalliredigens QYMF	5312564
YP_001320305.1	CDS	Amet_2493	NC_009633.1	2535850	2536371	D	TIGRFAM: Sporulation stage III, protein AB; KEGG: cth:Cthe_0844 stage III sporulation protein spoIIIAB; sporulation stage III, protein AB	2535850..2536371	Alkaliphilus metalliredigens QYMF	5312565
YP_001320306.1	CDS	Amet_2494	NC_009633.1	2536406	2536609	D	PFAM: Stage III sporulation AC family protein; KEGG: tte:TTE1285 hypothetical protein; stage III sporulation AC family protein	2536406..2536609	Alkaliphilus metalliredigens QYMF	5312566
YP_001320307.1	CDS	Amet_2495	NC_009633.1	2536622	2537008	D	TIGRFAM: Sporulation stage III, protein AD; KEGG: cth:Cthe_0842 stage III sporulation protein AD; sporulation stage III, protein AD	2536622..2537008	Alkaliphilus metalliredigens QYMF	5312567
YP_001320308.1	CDS	Amet_2496	NC_009633.1	2537060	2538193	D	TIGRFAM: Sporulation stage III, protein AE; KEGG: bha:BH2793 mutants block sporulation after engulfment; sporulation stage III, protein AE	2537060..2538193	Alkaliphilus metalliredigens QYMF	5312568
YP_001320309.1	CDS	Amet_2497	NC_009633.1	2538202	2538825	D	TIGRFAM: Sporulation stage III, protein AF; KEGG: ctc:CTC01585 stage III sporulation protein AF; sporulation stage III, protein AF	2538202..2538825	Alkaliphilus metalliredigens QYMF	5312569
YP_001320310.1	CDS	Amet_2498	NC_009633.1	2538846	2539436	D	TIGRFAM: Sporulation stage III, protein AG; KEGG: tte:TTE1289 stage III sporulation protein AG; sporulation stage III, protein AG	2538846..2539436	Alkaliphilus metalliredigens QYMF	5312570
YP_001320311.1	CDS	Amet_2499	NC_009633.1	2539462	2540226	D	KEGG: tte:TTE1290 stage III sporulation protein AH; hypothetical protein	2539462..2540226	Alkaliphilus metalliredigens QYMF	5312571
YP_001320312.1	CDS	Amet_2500	NC_009633.1	2540294	2540686	D	PFAM: protein of unknown function DUF322; KEGG: cth:Cthe_0837 protein of unknown function DUF322; hypothetical protein	2540294..2540686	Alkaliphilus metalliredigens QYMF	5312572
YP_001320313.1	CDS	Amet_2501	NC_009633.1	2540904	2541293	D	TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: cth:Cthe_0834 NusB antitermination factor; NusB antitermination factor	2540904..2541293	Alkaliphilus metalliredigens QYMF	5312573
YP_001320314.1	CDS	Amet_2502	NC_009633.1	2541283	2542275	D	PFAM: peptidase M22, glycoprotease; KEGG: sth:STH1848 O-sialoglycoprotein endopeptidase; O-sialoglycoprotein endopeptidase	2541283..2542275	Alkaliphilus metalliredigens QYMF	5312574
YP_001320315.1	CDS	xseA	NC_009633.1	2542328	2543560	D	bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit	2542328..2543560	Alkaliphilus metalliredigens QYMF	5312575
YP_001320316.1	CDS	Amet_2504	NC_009633.1	2543541	2543768	D	TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII, small subunit; KEGG: aba:Acid345_3427 exodeoxyribonuclease VII, small subunit; exodeoxyribonuclease VII small subunit	2543541..2543768	Alkaliphilus metalliredigens QYMF	5312576
YP_001320317.1	CDS	Amet_2505	NC_009633.1	2543771	2544658	D	PFAM: Polyprenyl synthetase; KEGG: cth:Cthe_0831 polyprenyl synthetase; polyprenyl synthetase	2543771..2544658	Alkaliphilus metalliredigens QYMF	5312577
YP_001320318.1	CDS	Amet_2506	NC_009633.1	2544674	2545123	D	PFAM: acid phosphatase/vanadium-dependent haloperoxidase related; KEGG: cth:Cthe_0830 acid phosphatase/vanadium-dependent haloperoxidase related; acid phosphatase/vanadium-dependent haloperoxidase-like protein	2544674..2545123	Alkaliphilus metalliredigens QYMF	5312578
YP_001320319.1	CDS	Amet_2507	NC_009633.1	2545944	2546492	D	KEGG: cth:Cthe_0829 hypothetical protein; hypothetical protein	2545944..2546492	Alkaliphilus metalliredigens QYMF	5312579
YP_001320320.1	CDS	Amet_2508	NC_009633.1	2546489	2548399	D	TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: Transketolase, central region; Transketolase domain protein; KEGG: tte:TTE1298 deoxyxylulose-5-phosphate synthase; deoxyxylulose-5-phosphate synthase	2546489..2548399	Alkaliphilus metalliredigens QYMF	5312580
YP_001320321.1	CDS	Amet_2509	NC_009633.1	2548414	2549217	D	TIGRFAM: hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4 domain protein; KEGG: cth:Cthe_0827 hemolysin A; hemolysin A	2548414..2549217	Alkaliphilus metalliredigens QYMF	5312581
YP_001320322.1	CDS	argR	NC_009633.1	2549366	2549815	D	regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes; arginine repressor	2549366..2549815	Alkaliphilus metalliredigens QYMF	5312582
YP_001320323.1	CDS	Amet_2511	NC_009633.1	2549830	2551539	D	TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: cth:Cthe_0814 DNA repair protein RecN; DNA repair protein RecN	2549830..2551539	Alkaliphilus metalliredigens QYMF	5312583
YP_001320324.1	CDS	Amet_2512	NC_009633.1	2551730	2553010	D	TIGRFAM: Peptidase S55, sporulation stage IV, protein B; PFAM: peptidase S55, SpoIVB; KEGG: tte:TTE1303 sporulation protein IVB; peptidase S55, sporulation stage IV, protein B	2551730..2553010	Alkaliphilus metalliredigens QYMF	5312584
YP_001320325.1	CDS	Amet_2513	NC_009633.1	2553161	2553958	D	TIGRFAM: Sporulation response regulator, Spo0A; PFAM: response regulator receiver; Sporulation initiation factor Spo0A-like; KEGG: ctc:CTC01569 stage 0 sporulation protein A; response regulator receiver protein	2553161..2553958	Alkaliphilus metalliredigens QYMF	5312585
YP_001320326.1	CDS	Amet_2514	NC_009633.1	2554105	2554683	D	PFAM: Exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: cth:Cthe_0507 exonuclease, RNase T and DNA polymerase III; exonuclease	2554105..2554683	Alkaliphilus metalliredigens QYMF	5312586
YP_001320327.1	CDS	Amet_2515	NC_009633.1	2554789	2555613	R	PFAM: regulatory protein RecX; KEGG: bld:BLi00877 similar to proteins; RBL02217; regulatory protein RecX	complement(2554789..2555613)	Alkaliphilus metalliredigens QYMF	5312587
YP_001320328.1	CDS	Amet_2516	NC_009633.1	2555858	2556979	D	PFAM: Thiamin pyrophosphokinase, catalytic region; KEGG: tte:TTE1305 hypothetical protein; thiamin pyrophosphokinase, catalytic region	2555858..2556979	Alkaliphilus metalliredigens QYMF	5312588
YP_001320329.1	CDS	Amet_2517	NC_009633.1	2556995	2557891	D	KEGG: tte:TTE1306 hypothetical protein; hypothetical protein	2556995..2557891	Alkaliphilus metalliredigens QYMF	5312589
YP_001320330.1	CDS	Amet_2518	NC_009633.1	2557903	2558595	D	PFAM: glycosyl transferase, family 2; KEGG: tte:TTE1307 glycosyltransferase involved in cell wall biogenesis; glycosyl transferase family protein	2557903..2558595	Alkaliphilus metalliredigens QYMF	5312590
YP_001320331.1	CDS	Amet_2519	NC_009633.1	2558600	2559436	D	KEGG: tte:TTE1308 hypothetical protein; hypothetical protein	2558600..2559436	Alkaliphilus metalliredigens QYMF	5312591
YP_001320332.1	CDS	Amet_2520	NC_009633.1	2559528	2560628	D	KEGG: swo:Swol_0596 hypothetical protein; hypothetical protein	2559528..2560628	Alkaliphilus metalliredigens QYMF	5312592
YP_001320333.1	CDS	Amet_2521	NC_009633.1	2560778	2561326	D	PFAM: NUDIX hydrolase; KEGG: tte:TTE1310 NTP pyrophosphohydrolases including oxidative damage repair enzymes; NUDIX hydrolase	2560778..2561326	Alkaliphilus metalliredigens QYMF	5312593
YP_001320334.1	CDS	Amet_2522	NC_009633.1	2561398	2562033	D	TIGRFAM: Sporulation stage II, protein M; PFAM: protein of unknown function DUF95, transmembrane; KEGG: tte:TTE1312 hypothetical protein; sporulation stage II, protein M	2561398..2562033	Alkaliphilus metalliredigens QYMF	5312594
YP_001320335.1	CDS	Amet_2523	NC_009633.1	2562174	2563058	D	TIGRFAM: tyrosine recombinase XerD; PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: cth:Cthe_0676 tyrosine recombinase XerD; tyrosine recombinase XerD	2562174..2563058	Alkaliphilus metalliredigens QYMF	5312595
YP_001320336.1	CDS	Amet_2524	NC_009633.1	2563160	2564332	D	catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose; phosphopentomutase	2563160..2564332	Alkaliphilus metalliredigens QYMF	5312596
YP_001320337.1	CDS	Amet_2525	NC_009633.1	2564379	2565200	D	TIGRFAM: inosine guanosine and xanthosine phosphorylase family; purine nucleoside phosphorylase I, inosine and guanosine-specific; PFAM: purine phosphorylase, family 2; KEGG: oih:OB1845 purine nucleoside phosphorylase; inosine guanosine and xanthosine phosphorylase family protein	2564379..2565200	Alkaliphilus metalliredigens QYMF	5312597
YP_001320338.1	CDS	Amet_2526	NC_009633.1	2565213	2566043	D	catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation; purine nucleoside phosphorylase	2565213..2566043	Alkaliphilus metalliredigens QYMF	5312598
YP_001320339.1	CDS	Amet_2527	NC_009633.1	2566046	2567365	D	TIGRFAM: pyrimidine-nucleoside phosphorylase; PFAM: glycosyl transferase, family 3; Pyrimidine nucleoside phosphorylase, C-terminal domain; KEGG: cno:NT01CX_1499 pyrimidine-nucleoside phosphorylase; pyrimidine-nucleoside phosphorylase	2566046..2567365	Alkaliphilus metalliredigens QYMF	5312599
YP_001320340.1	CDS	Amet_2528	NC_009633.1	2567504	2568667	D	PFAM: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: tte:TTE1314 D-alanyl-D-alanine carboxypeptidase; serine-type D-Ala-D-Ala carboxypeptidase	2567504..2568667	Alkaliphilus metalliredigens QYMF	5312600
YP_001320341.1	CDS	Amet_2529	NC_009633.1	2568750	2571377	D	PFAM: CBS domain containing protein; phosphoesterase, RecJ domain protein; Polynucleotide adenylyltransferase region; KEGG: cth:Cthe_0684 polynucleotide adenylyltransferase region; polynucleotide adenylyltransferase	2568750..2571377	Alkaliphilus metalliredigens QYMF	5312601
YP_001320342.1	CDS	Amet_2530	NC_009633.1	2571370	2571990	D	PFAM: peptidase M50; KEGG: tte:TTE1323 Zn-dependent protease; peptidase M50	2571370..2571990	Alkaliphilus metalliredigens QYMF	5312602
YP_001320343.1	CDS	Amet_2531	NC_009633.1	2572001	2572747	D	PFAM: chromosome segregation and condensation protein ScpA; KEGG: bce:BC4058 segregation and condensation protein A; chromosome segregation and condensation protein ScpA	2572001..2572747	Alkaliphilus metalliredigens QYMF	5312603
YP_001320344.1	CDS	Amet_2532	NC_009633.1	2572764	2573336	D	TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: ctc:CTC01528 segregation and condensation protein B; putative transcriptional regulator	2572764..2573336	Alkaliphilus metalliredigens QYMF	5312604
YP_001320345.1	CDS	Amet_2533	NC_009633.1	2573342	2574187	D	TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; KEGG: ctc:CTC02431 pyrroline-5-carboxylate reductase; pyrroline-5-carboxylate reductase	2573342..2574187	Alkaliphilus metalliredigens QYMF	5312605
YP_001320346.1	CDS	Amet_2534	NC_009633.1	2575154	2576272	D	PFAM: phage integrase family protein; KEGG: dsy:DSY1571 hypothetical protein; phage integrase family protein	2575154..2576272	Alkaliphilus metalliredigens QYMF	5312606
YP_001320347.1	CDS	Amet_2535	NC_009633.1	2576369	2576989	D	Represses a number of genes involved in the response to DNA damage; LexA repressor	2576369..2576989	Alkaliphilus metalliredigens QYMF	5312607
YP_001320348.1	CDS	Amet_2536	NC_009633.1	2577202	2578662	D	KEGG: tte:TTE2242 transposase; transposase	2577202..2578662	Alkaliphilus metalliredigens QYMF	5312608
YP_001320349.1	CDS	Amet_2537	NC_009633.1	2578808	2580088	R	PFAM: Aluminium resistance family protein; KEGG: cth:Cthe_0794 aluminium resistance protein; aluminium resistance family protein	complement(2578808..2580088)	Alkaliphilus metalliredigens QYMF	5312609
YP_001320350.1	CDS	Amet_2538	NC_009633.1	2580380	2580934	R	hypothetical protein	complement(2580380..2580934)	Alkaliphilus metalliredigens QYMF	5312610
YP_001320351.1	CDS	Amet_2539	NC_009633.1	2580915	2581520	R	PFAM: GTP-binding protein, HSR1-related; HSR1-like GTP-binding protein	complement(2580915..2581520)	Alkaliphilus metalliredigens QYMF	5312611
YP_001320352.1	CDS	Amet_2540	NC_009633.1	2581521	2582480	R	PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; KEGG: tte:TTE1366 ATPases of the AAA+ class; ATPase central domain-containing protein	complement(2581521..2582480)	Alkaliphilus metalliredigens QYMF	5312612
YP_001320353.1	CDS	Amet_2541	NC_009633.1	2582670	2582912	R	TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein, core; KEGG: chy:CHY_1393 hfq protein; RNA chaperone Hfq	complement(2582670..2582912)	Alkaliphilus metalliredigens QYMF	5312613
YP_001320354.1	CDS	miaA	NC_009633.1	2582949	2583887	R	IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase	complement(2582949..2583887)	Alkaliphilus metalliredigens QYMF	5312614
YP_001320355.1	CDS	mutL	NC_009633.1	2583903	2585816	R	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein	complement(2583903..2585816)	Alkaliphilus metalliredigens QYMF	5312615
YP_001320356.1	CDS	Amet_2544	NC_009633.1	2585856	2588498	R	This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS	complement(2585856..2588498)	Alkaliphilus metalliredigens QYMF	5312616
YP_001320357.1	CDS	Amet_2545	NC_009633.1	2588599	2590029	R	KEGG: cth:Cthe_0783 RNA modification enzyme, MiaB family; TIGRFAM: RNA modification enzyme, MiaB family; tRNA-i(6)A37 thiotransferase enzyme MiaB; PFAM: deoxyribonuclease/rho motif-related TRAM; Radical SAM domain protein; Protein of unknown function UPF0004-like; SMART: Elongator protein 3/MiaB/NifB; tRNA-i(6)A37 thiotransferase protein MiaB	complement(2588599..2590029)	Alkaliphilus metalliredigens QYMF	5312617
YP_001320358.1	CDS	Amet_2546	NC_009633.1	2590109	2590426	R	hypothetical protein	complement(2590109..2590426)	Alkaliphilus metalliredigens QYMF	5312618
YP_001320359.1	CDS	Amet_2547	NC_009633.1	2590416	2590688	R	hypothetical protein	complement(2590416..2590688)	Alkaliphilus metalliredigens QYMF	5312619
YP_001320360.1	CDS	Amet_2548	NC_009633.1	2590702	2591670	R	PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; Sporulation domain protein; KEGG: bsu:BG10825 N-acetylmuramoyl-L-alanine amidase, peptidoglycan hydrolase, LytC amidase family; sporulation domain-containing protein	complement(2590702..2591670)	Alkaliphilus metalliredigens QYMF	5312620
YP_001320361.1	CDS	Amet_2549	NC_009633.1	2591685	2591930	R	KEGG: cac:CAC1109 hypothetical protein, CF-8 family; hypothetical protein	complement(2591685..2591930)	Alkaliphilus metalliredigens QYMF	5312621
YP_001320362.1	CDS	Amet_2550	NC_009633.1	2592000	2593082	R	PFAM: RNA-directed DNA polymerase (Reverse transcriptase); KEGG: shw:Sputw3181_2465 RNA-directed DNA polymerase (reverse transcriptase); RNA-directed DNA polymerase	complement(2592000..2593082)	Alkaliphilus metalliredigens QYMF	5312622
YP_001320363.1	CDS	Amet_2552	NC_009633.1	2593405	2593746	R	KEGG: shw:Sputw3181_2466 hypothetical protein; hypothetical protein	complement(2593405..2593746)	Alkaliphilus metalliredigens QYMF	5312624
YP_001320364.1	CDS	Amet_2553	NC_009633.1	2593820	2594878	R	KEGG: shw:Sputw3181_2467 hypothetical protein; hypothetical protein	complement(2593820..2594878)	Alkaliphilus metalliredigens QYMF	5312625
YP_001320365.1	CDS	Amet_2554	NC_009633.1	2594878	2595231	R	hypothetical protein	complement(2594878..2595231)	Alkaliphilus metalliredigens QYMF	5312626
YP_001320366.1	CDS	Amet_2555	NC_009633.1	2595234	2595395	R	hypothetical protein	complement(2595234..2595395)	Alkaliphilus metalliredigens QYMF	5312627
YP_001320367.1	CDS	Amet_2556	NC_009633.1	2595395	2595838	R	hypothetical protein	complement(2595395..2595838)	Alkaliphilus metalliredigens QYMF	5312628
YP_001320368.1	CDS	Amet_2557	NC_009633.1	2595840	2596139	R	hypothetical protein	complement(2595840..2596139)	Alkaliphilus metalliredigens QYMF	5312629
YP_001320369.1	CDS	Amet_2558	NC_009633.1	2596139	2597035	R	hypothetical protein	complement(2596139..2597035)	Alkaliphilus metalliredigens QYMF	5312630
YP_001320370.1	CDS	Amet_2559	NC_009633.1	2597032	2598168	R	PFAM: Baseplate J family protein; KEGG: ctc:CTC02115 phage-like element pbsx protein XkdT; baseplate J family protein	complement(2597032..2598168)	Alkaliphilus metalliredigens QYMF	5312631
YP_001320371.1	CDS	Amet_2560	NC_009633.1	2598173	2598637	R	KEGG: ctc:CTC02116 phage-like element pbsx protein XkdS; phage-like element pbsx protein XkdS	complement(2598173..2598637)	Alkaliphilus metalliredigens QYMF	5312632
YP_001320372.1	CDS	Amet_2561	NC_009633.1	2598637	2599047	R	hypothetical protein	complement(2598637..2599047)	Alkaliphilus metalliredigens QYMF	5312633
YP_001320373.1	CDS	Amet_2562	NC_009633.1	2599034	2599987	R	hypothetical protein	complement(2599034..2599987)	Alkaliphilus metalliredigens QYMF	5312634
YP_001320374.1	CDS	Amet_2563	NC_009633.1	2599993	2600643	R	PFAM: Peptidoglycan-binding LysM; KEGG: bsu:BG11550 phage-like element PBSX protein; peptidoglycan-binding protein LysM	complement(2599993..2600643)	Alkaliphilus metalliredigens QYMF	5312635
YP_001320375.1	CDS	Amet_2564	NC_009633.1	2600654	2603035	R	TIGRFAM: phage tail tape measure protein, TP901 family; KEGG: ctc:CTC01100 phage protein, similar to tail length tape measure protein; TP901 family phage tail tape measure protein	complement(2600654..2603035)	Alkaliphilus metalliredigens QYMF	5312636
YP_001320376.1	CDS	Amet_2565	NC_009633.1	2603036	2603188	R	hypothetical protein	complement(2603036..2603188)	Alkaliphilus metalliredigens QYMF	5312637
YP_001320377.1	CDS	Amet_2566	NC_009633.1	2603242	2603691	R	PFAM: Phage XkdN-like protein; KEGG: lga:LGAS_0680 phage related protein; Phage XkdN-like protein	complement(2603242..2603691)	Alkaliphilus metalliredigens QYMF	5312638
YP_001320378.1	CDS	Amet_2567	NC_009633.1	2603708	2604118	R	KEGG: bsu:BG11547 phage-like element PBSX protein; phage-like element PBSX protein	complement(2603708..2604118)	Alkaliphilus metalliredigens QYMF	5312639
YP_001320379.1	CDS	Amet_2568	NC_009633.1	2604136	2605548	R	KEGG: lin:lin1278 hypothetical protein; hypothetical protein	complement(2604136..2605548)	Alkaliphilus metalliredigens QYMF	5312640
YP_001320380.1	CDS	Amet_2569	NC_009633.1	2605551	2605781	R	hypothetical protein	complement(2605551..2605781)	Alkaliphilus metalliredigens QYMF	5312641
YP_001320381.1	CDS	Amet_2570	NC_009633.1	2605793	2606611	R	hypothetical protein	complement(2605793..2606611)	Alkaliphilus metalliredigens QYMF	5312642
YP_001320382.1	CDS	Amet_2571	NC_009633.1	2606622	2607032	R	hypothetical protein	complement(2606622..2607032)	Alkaliphilus metalliredigens QYMF	5312643
YP_001320383.1	CDS	Amet_2572	NC_009633.1	2607032	2607409	R	hypothetical protein	complement(2607032..2607409)	Alkaliphilus metalliredigens QYMF	5312644
YP_001320384.1	CDS	Amet_2573	NC_009633.1	2607409	2607729	R	hypothetical protein	complement(2607409..2607729)	Alkaliphilus metalliredigens QYMF	5312645
YP_001320385.1	CDS	Amet_2574	NC_009633.1	2607770	2608804	R	hypothetical protein	complement(2607770..2608804)	Alkaliphilus metalliredigens QYMF	5312646
YP_001320386.1	CDS	Amet_2575	NC_009633.1	2608816	2609226	R	hypothetical protein	complement(2608816..2609226)	Alkaliphilus metalliredigens QYMF	5312647
YP_001320387.1	CDS	Amet_2576	NC_009633.1	2609245	2610621	R	hypothetical protein	complement(2609245..2610621)	Alkaliphilus metalliredigens QYMF	5312648
YP_001320388.1	CDS	Amet_2577	NC_009633.1	2610639	2611655	R	KEGG: gfo:orf2413 hypothetical protein; hypothetical protein	complement(2610639..2611655)	Alkaliphilus metalliredigens QYMF	5312649
YP_001320389.1	CDS	Amet_2578	NC_009633.1	2611648	2613144	R	hypothetical protein	complement(2611648..2613144)	Alkaliphilus metalliredigens QYMF	5312650
YP_001320390.1	CDS	Amet_2579	NC_009633.1	2613137	2614546	R	KEGG: rru:Rru_A2590 hypothetical protein; hypothetical protein	complement(2613137..2614546)	Alkaliphilus metalliredigens QYMF	5312651
YP_001320391.1	CDS	Amet_2580	NC_009633.1	2614539	2615393	R	KEGG: bld:BLi01463 YqaS; YqaS	complement(2614539..2615393)	Alkaliphilus metalliredigens QYMF	5312652
YP_001320392.1	CDS	Amet_2581	NC_009633.1	2615437	2615628	R	hypothetical protein	complement(2615437..2615628)	Alkaliphilus metalliredigens QYMF	5312653
YP_001320393.1	CDS	Amet_2582	NC_009633.1	2615672	2616946	R	PFAM: DNA methylase N-4/N-6 domain protein; ParB domain protein nuclease; KEGG: cth:Cthe_1729 DNA methylase N-4/N-6; DNA methylase N-4/N-6 domain-containing protein	complement(2615672..2616946)	Alkaliphilus metalliredigens QYMF	5312654
YP_001320394.1	CDS	Amet_2583	NC_009633.1	2617036	2617530	R	KEGG: cac:CAC0550 possible sigma factor; putative sigma factor	complement(2617036..2617530)	Alkaliphilus metalliredigens QYMF	5312655
YP_001320395.1	CDS	Amet_2584	NC_009633.1	2617541	2618233	R	PFAM: protein of unknown function DUF968; KEGG: lin:lin1740 hypothetical protein; hypothetical protein	complement(2617541..2618233)	Alkaliphilus metalliredigens QYMF	5312656
YP_001320396.1	CDS	Amet_2585	NC_009633.1	2618296	2618712	R	TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: cac:CAC3723 single strand DNA binding protein, SSB; single-strand binding protein	complement(2618296..2618712)	Alkaliphilus metalliredigens QYMF	5312657
YP_001320397.1	CDS	Amet_2586	NC_009633.1	2618741	2619187	R	hypothetical protein	complement(2618741..2619187)	Alkaliphilus metalliredigens QYMF	5312658
YP_001320398.1	CDS	Amet_2587	NC_009633.1	2619353	2619619	R	hypothetical protein	complement(2619353..2619619)	Alkaliphilus metalliredigens QYMF	5312659
YP_001320399.1	CDS	Amet_2588	NC_009633.1	2619600	2619743	R	hypothetical protein	complement(2619600..2619743)	Alkaliphilus metalliredigens QYMF	5312660
YP_001320400.1	CDS	Amet_2589	NC_009633.1	2619740	2619988	R	hypothetical protein	complement(2619740..2619988)	Alkaliphilus metalliredigens QYMF	5312661
YP_001320401.1	CDS	Amet_2590	NC_009633.1	2619985	2620515	R	hypothetical protein	complement(2619985..2620515)	Alkaliphilus metalliredigens QYMF	5312662
YP_001320402.1	CDS	Amet_2591	NC_009633.1	2620527	2620709	R	hypothetical protein	complement(2620527..2620709)	Alkaliphilus metalliredigens QYMF	5312663
YP_001320403.1	CDS	Amet_2592	NC_009633.1	2620709	2620942	R	hypothetical protein	complement(2620709..2620942)	Alkaliphilus metalliredigens QYMF	5312664
YP_001320404.1	CDS	Amet_2593	NC_009633.1	2620943	2621239	R	hypothetical protein	complement(2620943..2621239)	Alkaliphilus metalliredigens QYMF	5312665
YP_001320405.1	CDS	Amet_2594	NC_009633.1	2621245	2621457	R	hypothetical protein	complement(2621245..2621457)	Alkaliphilus metalliredigens QYMF	5312666
YP_001320406.1	CDS	Amet_2595	NC_009633.1	2621474	2621968	R	KEGG: ptr:744052 hypothetical protein LOC744052; hypothetical protein	complement(2621474..2621968)	Alkaliphilus metalliredigens QYMF	5312667
YP_001320407.1	CDS	Amet_2596	NC_009633.1	2622384	2622866	R	KEGG: ctc:CTC02141 hypothetical protein; hypothetical protein	complement(2622384..2622866)	Alkaliphilus metalliredigens QYMF	5312668
YP_001320408.1	CDS	Amet_2597	NC_009633.1	2622899	2623117	R	hypothetical protein	complement(2622899..2623117)	Alkaliphilus metalliredigens QYMF	5312669
YP_001320409.1	CDS	Amet_2598	NC_009633.1	2623129	2623506	R	PFAM: protein of unknown function DUF1064; KEGG: lin:lin0099 hypothetical protein; hypothetical protein	complement(2623129..2623506)	Alkaliphilus metalliredigens QYMF	5312670
YP_001320410.1	CDS	Amet_2599	NC_009633.1	2623659	2624450	R	KEGG: bce:BC1875 phage protein; hypothetical protein	complement(2623659..2624450)	Alkaliphilus metalliredigens QYMF	5312671
YP_001320411.1	CDS	Amet_2600	NC_009633.1	2624450	2624683	R	KEGG: bce:BC1874 phage protein; phage protein	complement(2624450..2624683)	Alkaliphilus metalliredigens QYMF	5312672
YP_001320412.1	CDS	Amet_2601	NC_009633.1	2624683	2625435	R	PFAM: IstB domain protein ATP-binding protein; KEGG: cac:CAC1933 hypothetical protein; IstB ATP binding domain-containing protein	complement(2624683..2625435)	Alkaliphilus metalliredigens QYMF	5312673
YP_001320413.1	CDS	Amet_2602	NC_009633.1	2625557	2626345	R	TIGRFAM: primosome, DnaD subunit; PFAM: DnaD and phage-associated region; KEGG: efa:EF1434 DnaD domain protein; primosome subunit DnaD	complement(2625557..2626345)	Alkaliphilus metalliredigens QYMF	5312674
YP_001320414.1	CDS	Amet_2603	NC_009633.1	2626360	2627100	R	KEGG: lin:lin1754 hypothetical protein; hypothetical protein	complement(2626360..2627100)	Alkaliphilus metalliredigens QYMF	5312675
YP_001320415.1	CDS	Amet_2604	NC_009633.1	2627101	2627895	R	TIGRFAM: phage recombination protein Bet; PFAM: RecT protein; KEGG: lin:lin1755 hypothetical protein; phage recombination protein Bet	complement(2627101..2627895)	Alkaliphilus metalliredigens QYMF	5312676
YP_001320416.1	CDS	Amet_2605	NC_009633.1	2627917	2628117	R	hypothetical protein	complement(2627917..2628117)	Alkaliphilus metalliredigens QYMF	5312677
YP_001320417.1	CDS	Amet_2606	NC_009633.1	2628132	2630084	R	KEGG: gfo:orf2459 hypothetical protein; hypothetical protein	complement(2628132..2630084)	Alkaliphilus metalliredigens QYMF	5312678
YP_001320418.1	CDS	Amet_2607	NC_009633.1	2630081	2630407	R	hypothetical protein	complement(2630081..2630407)	Alkaliphilus metalliredigens QYMF	5312679
YP_001320419.1	CDS	Amet_2608	NC_009633.1	2630392	2630526	R	hypothetical protein	complement(2630392..2630526)	Alkaliphilus metalliredigens QYMF	5312680
YP_001320420.1	CDS	Amet_2609	NC_009633.1	2630545	2630697	R	hypothetical protein	complement(2630545..2630697)	Alkaliphilus metalliredigens QYMF	5312681
YP_001320421.1	CDS	Amet_2610	NC_009633.1	2630716	2630913	R	hypothetical protein	complement(2630716..2630913)	Alkaliphilus metalliredigens QYMF	5312682
YP_001320422.1	CDS	Amet_2611	NC_009633.1	2630897	2631082	R	hypothetical protein	complement(2630897..2631082)	Alkaliphilus metalliredigens QYMF	5312683
YP_001320423.1	CDS	Amet_2612	NC_009633.1	2631093	2631317	R	PFAM: helix-turn-helix domain protein; KEGG: tte:TTE2124 helix-turn-helix; XRE family transcriptional regulator	complement(2631093..2631317)	Alkaliphilus metalliredigens QYMF	5312684
YP_001320424.1	CDS	Amet_2613	NC_009633.1	2631517	2631879	D	PFAM: helix-turn-helix domain protein; KEGG: gka:GK0493 transcriptional regulator; helix-turn-helix domain-containing protein	2631517..2631879	Alkaliphilus metalliredigens QYMF	5312685
YP_001320425.1	CDS	Amet_2614	NC_009633.1	2631957	2632307	D	KEGG: gka:GK0550 hypothetical protein; hypothetical protein	2631957..2632307	Alkaliphilus metalliredigens QYMF	5312686
YP_001320426.1	CDS	Amet_2615	NC_009633.1	2632709	2633215	D	hypothetical protein	2632709..2633215	Alkaliphilus metalliredigens QYMF	5312687
YP_001320427.1	CDS	Amet_2616	NC_009633.1	2633306	2635006	D	PFAM: Resolvase, N-terminal domain; Recombinase; KEGG: cpf:CPF_2606 site-specific recombinase, resolvase family; resolvase domain-containing protein	2633306..2635006	Alkaliphilus metalliredigens QYMF	5312688
YP_001320428.1	CDS	Amet_2617	NC_009633.1	2635018	2635170	R	hypothetical protein	complement(2635018..2635170)	Alkaliphilus metalliredigens QYMF	5312689
YP_001320429.1	CDS	Amet_2618	NC_009633.1	2635373	2636572	D	catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase	2635373..2636572	Alkaliphilus metalliredigens QYMF	5312690
YP_001320430.1	CDS	Amet_2619	NC_009633.1	2636745	2637410	R	PFAM: regulatory protein, MerR; KEGG: cth:Cthe_0804 transcriptional regulator, MerR family; MerR family transcriptional regulator	complement(2636745..2637410)	Alkaliphilus metalliredigens QYMF	5312691
YP_001320431.1	CDS	Amet_2620	NC_009633.1	2637586	2638590	R	PFAM: peptidase M20; peptidase M42 family protein; KEGG: tte:TTE0443 Cellulase M and related proteins; cellulase	complement(2637586..2638590)	Alkaliphilus metalliredigens QYMF	5312692
YP_001320432.1	CDS	Amet_2621	NC_009633.1	2638590	2639612	R	PFAM: peptidase M18, aminopeptidase I; peptidase M42 family protein; KEGG: tte:TTE0442 Cellulase M and related proteins; cellulase	complement(2638590..2639612)	Alkaliphilus metalliredigens QYMF	5312693
YP_001320433.1	CDS	Amet_2622	NC_009633.1	2639603	2640655	R	PFAM: peptidase M20; peptidase M42 family protein; KEGG: tte:TTE0441 Cellulase M and related proteins; peptidase M42 family protein	complement(2639603..2640655)	Alkaliphilus metalliredigens QYMF	5312694
YP_001320434.1	CDS	Amet_2623	NC_009633.1	2640798	2641574	R	PFAM: MCP methyltransferase, CheR-type; KEGG: cth:Cthe_0717 MCP methyltransferase, CheR-type; protein-glutamate O-methyltransferase	complement(2640798..2641574)	Alkaliphilus metalliredigens QYMF	5312695
YP_001320435.1	CDS	Amet_2624	NC_009633.1	2641641	2642792	R	PFAM: RNA binding S1 domain protein; KEGG: cno:NT01CX_1373 RpsA; RNA-binding S1 domain-containing protein	complement(2641641..2642792)	Alkaliphilus metalliredigens QYMF	5312696
YP_001320436.1	CDS	Amet_2625	NC_009633.1	2642835	2643677	R	catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase	complement(2642835..2643677)	Alkaliphilus metalliredigens QYMF	5312697
YP_001320437.1	CDS	Amet_2626	NC_009633.1	2643792	2644373	R	TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; KEGG: tte:TTE1351 1-acyl-sn-glycerol-3-phosphate acyltransferase; 1-acyl-sn-glycerol-3-phosphate acyltransferase	complement(2643792..2644373)	Alkaliphilus metalliredigens QYMF	5312698
YP_001320438.1	CDS	Amet_2627	NC_009633.1	2644374	2645036	R	TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region; KEGG: lme:LEUM_1293 cytidylate kinase; cytidylate kinase	complement(2644374..2645036)	Alkaliphilus metalliredigens QYMF	5312699
YP_001320439.1	CDS	Amet_2628	NC_009633.1	2645298	2645735	R	hypothetical protein	complement(2645298..2645735)	Alkaliphilus metalliredigens QYMF	5312700
YP_001320440.1	CDS	Amet_2629	NC_009633.1	2645755	2646984	R	PFAM: glucose-inhibited division protein A; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: tte:TTE1347 predicted flavoproteins; hypothetical protein	complement(2645755..2646984)	Alkaliphilus metalliredigens QYMF	5312701
YP_001320441.1	CDS	Amet_2630	NC_009633.1	2646977	2647609	R	PFAM: Phosphoglycerate mutase; KEGG: tte:TTE1346 Phosphoglycerate mutase/fructose-2,6-bisphosphatase; phosphoglycerate mutase	complement(2646977..2647609)	Alkaliphilus metalliredigens QYMF	5312702
YP_001320442.1	CDS	Amet_2631	NC_009633.1	2647743	2648609	R	PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: ctc:CTC01318 transcriptional regulator, RpiR family; RpiR family transcriptional regulator	complement(2647743..2648609)	Alkaliphilus metalliredigens QYMF	5312703
YP_001320443.1	CDS	Amet_2632	NC_009633.1	2648629	2649168	R	TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: tte:TTE1211 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit; pyruvate/ketoisovalerate oxidoreductase subunit gamma	complement(2648629..2649168)	Alkaliphilus metalliredigens QYMF	5312704
YP_001320444.1	CDS	Amet_2633	NC_009633.1	2649170	2649991	R	catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin; 2-oxoglutarate ferredoxin oxidoreductase subunit beta	complement(2649170..2649991)	Alkaliphilus metalliredigens QYMF	5312705
YP_001320445.1	CDS	Amet_2634	NC_009633.1	2649991	2651127	R	PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: tte:TTE1340 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein	complement(2649991..2651127)	Alkaliphilus metalliredigens QYMF	5312706
YP_001320446.1	CDS	Amet_2635	NC_009633.1	2651132	2651338	R	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: tte:TTE1216 ferredoxin 3; 4Fe-4S ferredoxin	complement(2651132..2651338)	Alkaliphilus metalliredigens QYMF	5312707
YP_001320447.1	CDS	Amet_2636	NC_009633.1	2651514	2652278	R	TIGRFAM: stationary-phase survival protein SurE; PFAM: Survival protein SurE; KEGG: chy:CHY_0957 acid phosphatase SurE; stationary-phase survival protein SurE	complement(2651514..2652278)	Alkaliphilus metalliredigens QYMF	5312708
YP_001320448.1	CDS	Amet_2637	NC_009633.1	2652297	2653037	D	KEGG: cth:Cthe_0704 hypothetical protein; hypothetical protein	2652297..2653037	Alkaliphilus metalliredigens QYMF	5312709
YP_001320449.1	CDS	Amet_2638	NC_009633.1	2653125	2654522	R	Converts oxaloacetate to phosphoenolpyruvate using ATP as an energy source; oxaloacetate decarboxylase	complement(2653125..2654522)	Alkaliphilus metalliredigens QYMF	5312710
YP_001320450.1	CDS	Amet_2639	NC_009633.1	2654704	2655177	R	PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5	complement(2654704..2655177)	Alkaliphilus metalliredigens QYMF	5312711
YP_001320451.1	CDS	Amet_2640	NC_009633.1	2655262	2655966	R	PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: cth:Cthe_0693 pseudouridine synthase, Rsu; pseudouridine synthase	complement(2655262..2655966)	Alkaliphilus metalliredigens QYMF	5312712
YP_001320452.1	CDS	Amet_2641	NC_009633.1	2656007	2657287	R	PFAM: glucose-inhibited division protein A; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cno:NT01CX_2042 hypothetical protein; glucose-inhibited division protein A	complement(2656007..2657287)	Alkaliphilus metalliredigens QYMF	5312713
YP_001320453.1	CDS	Amet_2642	NC_009633.1	2657305	2658234	R	KEGG: tte:TTE1329 hypothetical protein; hypothetical protein	complement(2657305..2658234)	Alkaliphilus metalliredigens QYMF	5312714
YP_001320454.1	CDS	Amet_2643	NC_009633.1	2658495	2659628	R	PFAM: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: tte:TTE1328 D-alanyl-D-alanine carboxypeptidase; serine-type D-Ala-D-Ala carboxypeptidase	complement(2658495..2659628)	Alkaliphilus metalliredigens QYMF	5312715
YP_001320455.1	CDS	Amet_2644	NC_009633.1	2659895	2660317	R	KEGG: gvi:glr4396 unknown protein; hypothetical protein	complement(2659895..2660317)	Alkaliphilus metalliredigens QYMF	5312716
YP_001320456.1	CDS	Amet_2645	NC_009633.1	2660406	2660855	R	TIGRFAM: Sporulation protein YtfJ; KEGG: tte:TTE1327 hypothetical protein; sporulation protein YtfJ	complement(2660406..2660855)	Alkaliphilus metalliredigens QYMF	5312717
YP_001320457.1	CDS	Amet_2646	NC_009633.1	2660848	2661483	R	KEGG: bsu:BG13848 hypothetical protein; hypothetical protein	complement(2660848..2661483)	Alkaliphilus metalliredigens QYMF	5312718
YP_001320458.1	CDS	Amet_2647	NC_009633.1	2661764	2662303	D	PFAM: helix-turn-helix domain protein; Cupin 2, conserved barrel domain protein; KEGG: cpr:CPR_1934 DNA-binding protein; XRE family transcriptional regulator	2661764..2662303	Alkaliphilus metalliredigens QYMF	5312719
YP_001320459.1	CDS	Amet_2648	NC_009633.1	2662321	2662734	D	PFAM: S-adenosylmethionine decarboxylase related; KEGG: tma:TM0655 S-adenosylmethionine decarboxylase; S-adenosylmethionine decarboxylase-like protein	2662321..2662734	Alkaliphilus metalliredigens QYMF	5312720
YP_001320460.1	CDS	Amet_2649	NC_009633.1	2662959	2663813	D	catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase	2662959..2663813	Alkaliphilus metalliredigens QYMF	5312721
YP_001320461.1	CDS	Amet_2650	NC_009633.1	2663800	2664648	D	TIGRFAM: putative agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: cpe:CPE0551 probable agmatinase; putative agmatinase	2663800..2664648	Alkaliphilus metalliredigens QYMF	5312722
YP_001320462.1	CDS	Amet_2651	NC_009633.1	2664972	2666846	D	PFAM: transposase, IS4 family protein; KEGG: tte:TTE2604 transposase; transposase, IS4 family protein	2664972..2666846	Alkaliphilus metalliredigens QYMF	5312723
YP_001320463.1	CDS	Amet_2652	NC_009633.1	2666936	2668369	R	Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase	complement(2666936..2668369)	Alkaliphilus metalliredigens QYMF	5312724
YP_001320464.1	CDS	Amet_2653	NC_009633.1	2668455	2669648	R	PFAM: aminotransferase, class I and II; KEGG: cth:Cthe_0755 aminotransferase, class I and II; class I and II aminotransferase	complement(2668455..2669648)	Alkaliphilus metalliredigens QYMF	5312725
YP_001320465.1	CDS	Amet_2654	NC_009633.1	2669790	2670167	R	PFAM: transcriptional regulator PadR family protein; KEGG: rxy:Rxyl_2059 transcriptional regulator, PadR-like family; PadR-like family transcriptional regulator	complement(2669790..2670167)	Alkaliphilus metalliredigens QYMF	5312726
YP_001320466.1	CDS	Amet_2655	NC_009633.1	2670174	2671004	R	PFAM: PHP C-terminal domain protein; SMART: phosphoesterase PHP domain protein; KEGG: tte:TTE1369 predicted metal-dependent phosphoesterases (PHP family); phosphotransferase domain-containing protein	complement(2670174..2671004)	Alkaliphilus metalliredigens QYMF	5312727
YP_001320467.1	CDS	Amet_2656	NC_009633.1	2671225	2671485	R	PFAM: Stage V sporulation protein S; KEGG: bld:BLi01921 SpoVS; stage V sporulation protein S	complement(2671225..2671485)	Alkaliphilus metalliredigens QYMF	5312728
YP_001320468.1	CDS	Amet_2657	NC_009633.1	2671718	2673145	R	protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP; phosphodiesterase	complement(2671718..2673145)	Alkaliphilus metalliredigens QYMF	5312729
YP_001320469.1	CDS	Amet_2658	NC_009633.1	2673451	2674494	R	KEGG: cth:Cthe_1050 RecA protein; TIGRFAM: recA protein; PFAM: RecA domain protein; SMART: AAA ATPase; recA protein	complement(2673451..2674494)	Alkaliphilus metalliredigens QYMF	5312730
YP_001320470.1	CDS	Amet_2659	NC_009633.1	2674695	2675231	R	TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: tte:TTE1376 Phosphatidylglycerophosphate synthase; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	complement(2674695..2675231)	Alkaliphilus metalliredigens QYMF	5312731
YP_001320471.1	CDS	Amet_2660	NC_009633.1	2675215	2676555	R	KEGG: tte:TTE1377 2-methylthioadenine synthetase; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme YliG; PFAM: deoxyribonuclease/rho motif-related TRAM; Radical SAM domain protein; Protein of unknown function UPF0004-like; SMART: Elongator protein 3/MiaB/NifB; MiaB-like tRNA modifying protein YliG	complement(2675215..2676555)	Alkaliphilus metalliredigens QYMF	5312732
YP_001320472.1	CDS	Amet_2661	NC_009633.1	2676558	2677646	R	catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA; tRNA 2-selenouridine synthase	complement(2676558..2677646)	Alkaliphilus metalliredigens QYMF	5312733
YP_001320473.1	CDS	Amet_2662	NC_009633.1	2677656	2679986	R	PFAM: cell division protein FtsK/SpoIIIE SMART: AAA ATPase; KEGG: ctc:CTC01286 putative stage III sporulation protein E; cell division protein FtsK	complement(2677656..2679986)	Alkaliphilus metalliredigens QYMF	5312734
YP_001320474.1	CDS	Amet_2663	NC_009633.1	2680276	2681040	R	PFAM: peptidase S14, ClpP; KEGG: tte:TTE1381 protease subunit of ATP-dependent Clp protease; peptidase S14, ClpP	complement(2680276..2681040)	Alkaliphilus metalliredigens QYMF	5312735
YP_001320475.1	CDS	Amet_2664	NC_009633.1	2681294	2681554	R	TIGRFAM: Sporulation protein YlmC/YmxH; PFAM: PRC-barrel domain protein; KEGG: tte:TTE1383 hypothetical protein; sporulation protein YlmC/YmxH	complement(2681294..2681554)	Alkaliphilus metalliredigens QYMF	5312736
YP_001320476.1	CDS	Amet_2665	NC_009633.1	2681775	2682995	R	PFAM: peptidase M16 domain protein; KEGG: cth:Cthe_0419 peptidase M16-like protein; peptidase M16 domain-containing protein	complement(2681775..2682995)	Alkaliphilus metalliredigens QYMF	5312737
YP_001320477.1	CDS	Amet_2666	NC_009633.1	2683058	2683792	R	PFAM: polysaccharide deacetylase; KEGG: tte:TTE1386 predicted xylanase/chitin deacetylase; polysaccharide deacetylase	complement(2683058..2683792)	Alkaliphilus metalliredigens QYMF	5312738
YP_001320478.1	CDS	Amet_2667	NC_009633.1	2683901	2686015	R	PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH, type 1, domain protein; SMART: KH domain protein; KEGG: tte:TTE1387 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase); polynucleotide phosphorylase/polyadenylase	complement(2683901..2686015)	Alkaliphilus metalliredigens QYMF	5312739
YP_001320479.1	CDS	rpsO	NC_009633.1	2686248	2686511	R	primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15	complement(2686248..2686511)	Alkaliphilus metalliredigens QYMF	5312740
YP_001320480.1	CDS	Amet_2669	NC_009633.1	2686616	2687539	R	TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase / FAD synthetase; KEGG: cth:Cthe_0987 riboflavin biosynthesis protein RibF; riboflavin biosynthesis protein RibF	complement(2686616..2687539)	Alkaliphilus metalliredigens QYMF	5312741
YP_001320481.1	CDS	truB	NC_009633.1	2687553	2688443	R	catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B	complement(2687553..2688443)	Alkaliphilus metalliredigens QYMF	5312742
YP_001320482.1	CDS	Amet_2671	NC_009633.1	2688448	2689422	R	PFAM: phosphoesterase, RecJ domain protein; phosphoesterase, DHHA1; KEGG: tte:TTE1391 exopolyphosphatase-related proteins; phosphoesterase domain-containing protein	complement(2688448..2689422)	Alkaliphilus metalliredigens QYMF	5312743
YP_001320483.1	CDS	rbfA	NC_009633.1	2689400	2689816	R	associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A	complement(2689400..2689816)	Alkaliphilus metalliredigens QYMF	5312744
YP_001320484.1	CDS	infB	NC_009633.1	2689827	2691947	R	Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2	complement(2689827..2691947)	Alkaliphilus metalliredigens QYMF	5312745
YP_001320485.1	CDS	Amet_2674	NC_009633.1	2691986	2692297	R	PFAM: ribosomal protein L7Ae/L30e/S12e/Gadd45; KEGG: ser:SERP0835 30S ribosomal protein L7Ae, putative; 50S ribosomal protein L7Ae/L30e/S12e/Gadd45	complement(2691986..2692297)	Alkaliphilus metalliredigens QYMF	5312746
YP_001320486.1	CDS	Amet_2675	NC_009633.1	2692281	2692559	R	PFAM: protein of unknown function DUF448; KEGG: cth:Cthe_0993 protein of unknown function DUF448; hypothetical protein	complement(2692281..2692559)	Alkaliphilus metalliredigens QYMF	5312747
YP_001320487.1	CDS	Amet_2676	NC_009633.1	2692570	2693610	R	TIGRFAM: transcription termination factor NusA; PFAM: RNA binding S1 domain protein; KH, type 1, domain protein; NusA N-terminal domain protein; SMART: KH domain protein; KEGG: dsy:DSY2520 hypothetical protein; NusA antitermination factor	complement(2692570..2693610)	Alkaliphilus metalliredigens QYMF	5312748
YP_001320488.1	CDS	Amet_2677	NC_009633.1	2693627	2694085	R	PFAM: protein of unknown function DUF150; KEGG: cth:Cthe_0995 protein of unknown function DUF150; hypothetical protein	complement(2693627..2694085)	Alkaliphilus metalliredigens QYMF	5312749
YP_001320489.1	CDS	Amet_2678	NC_009633.1	2694274	2698572	R	KEGG: cth:Cthe_0996 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, epsilon subunit; DNA polymerase III, alpha subunit; PFAM: PHP C-terminal domain protein; nucleic acid binding, OB-fold, tRNA/helicase-type; Exonuclease, RNase T and DNA polymerase III; SMART: phosphoesterase PHP domain protein; Exonuclease; DNA polymerase III subunit alpha	complement(2694274..2698572)	Alkaliphilus metalliredigens QYMF	5312750
YP_001320490.1	CDS	Amet_2679	NC_009633.1	2698585	2699211	R	PFAM: glycosyl transferase, family 2; KEGG: tte:TTE1399 glycosyltransferase involved in cell wall biogenesis; glycosyl transferase family protein	complement(2698585..2699211)	Alkaliphilus metalliredigens QYMF	5312751
YP_001320491.1	CDS	Amet_2680	NC_009633.1	2699229	2700275	R	TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; PFAM: IspG family protein; KEGG: tte:TTE1400 Essential bacterial protein, involved in density-dependent regulation of peptidoglycan biosynthesis; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase	complement(2699229..2700275)	Alkaliphilus metalliredigens QYMF	5312752
YP_001320492.1	CDS	Amet_2681	NC_009633.1	2700421	2701464	R	TIGRFAM: putative membrane-associated zinc metalloprotease; PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein; KEGG: tte:TTE1401 predicted membrane-associated Zn-dependent protease 1; putative membrane-associated zinc metalloprotease	complement(2700421..2701464)	Alkaliphilus metalliredigens QYMF	5312753
YP_001320493.1	CDS	Amet_2682	NC_009633.1	2701440	2702588	R	catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase	complement(2701440..2702588)	Alkaliphilus metalliredigens QYMF	5312754
YP_001320494.1	CDS	Amet_2683	NC_009633.1	2702747	2703529	R	PFAM: phosphatidate cytidylyltransferase; KEGG: ctc:CTC01266 phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase	complement(2702747..2703529)	Alkaliphilus metalliredigens QYMF	5312755
YP_001320495.1	CDS	Amet_2684	NC_009633.1	2703542	2704288	R	TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; KEGG: ctc:CTC01265 undecaprenyl pyrophosphate synthetase; undecaprenyl diphosphate synthase	complement(2703542..2704288)	Alkaliphilus metalliredigens QYMF	5312756
YP_001320496.1	CDS	Amet_2685	NC_009633.1	2704342	2704530	R	hypothetical protein	complement(2704342..2704530)	Alkaliphilus metalliredigens QYMF	5312757
YP_001320497.1	CDS	frr	NC_009633.1	2704533	2705090	R	Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor	complement(2704533..2705090)	Alkaliphilus metalliredigens QYMF	5312758
YP_001320498.1	CDS	pyrH	NC_009633.1	2705241	2705951	R	Catalyzes the phosphorylation of UMP to UDP; uridylate kinase	complement(2705241..2705951)	Alkaliphilus metalliredigens QYMF	5312759
YP_001320499.1	CDS	tsf	NC_009633.1	2706130	2706777	R	EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts	complement(2706130..2706777)	Alkaliphilus metalliredigens QYMF	5312760
YP_001320500.1	CDS	rpsB	NC_009633.1	2706851	2707549	R	one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2	complement(2706851..2707549)	Alkaliphilus metalliredigens QYMF	5312761
YP_001320501.1	CDS	Amet_2690	NC_009633.1	2707712	2708170	R	hypothetical protein	complement(2707712..2708170)	Alkaliphilus metalliredigens QYMF	5312762
YP_001320502.1	CDS	Amet_2691	NC_009633.1	2708172	2708714	R	hypothetical protein	complement(2708172..2708714)	Alkaliphilus metalliredigens QYMF	5312763
YP_001320503.1	CDS	Amet_2692	NC_009633.1	2708750	2709061	R	hypothetical protein	complement(2708750..2709061)	Alkaliphilus metalliredigens QYMF	5312764
YP_001320504.1	CDS	Amet_2693	NC_009633.1	2709073	2710887	R	PFAM: protein of unknown function DUF342; KEGG: cth:Cthe_0498 protein of unknown function DUF342; hypothetical protein	complement(2709073..2710887)	Alkaliphilus metalliredigens QYMF	5312765
YP_001320505.1	CDS	Amet_2694	NC_009633.1	2710954	2711685	R	TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma-70; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: sco:SCO5621 RNA polymerase sigma factor WhiG; RNA polymerase sigma-28 subunit FliA/WhiG	complement(2710954..2711685)	Alkaliphilus metalliredigens QYMF	5312766
YP_001320506.1	CDS	Amet_2695	NC_009633.1	2711702	2712190	R	catalyzes the conversion of glutamine residues to glutamate on methyl-accepting chemotaxis receptors; chemoreceptor glutamine deamidase CheD	complement(2711702..2712190)	Alkaliphilus metalliredigens QYMF	5312767
YP_001320507.1	CDS	Amet_2696	NC_009633.1	2712191	2712808	R	PFAM: CheC domain protein; KEGG: tte:TTE1415 Chemotaxis protein CheC, inhibitor of MCP methylation; CheC, inhibitor of MCP methylation	complement(2712191..2712808)	Alkaliphilus metalliredigens QYMF	5312768
YP_001320508.1	CDS	Amet_2697	NC_009633.1	2712829	2713275	R	PFAM: CheW domain protein; KEGG: cth:Cthe_0491 CheW protein; putative CheW protein	complement(2712829..2713275)	Alkaliphilus metalliredigens QYMF	5312769
YP_001320509.1	CDS	Amet_2698	NC_009633.1	2713288	2715345	R	PFAM: CheW domain protein; ATP-binding region, ATPase domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; P2 response regulator binding domain protein; KEGG: cth:Cthe_0490 CheA signal transduction histidine kinases; CheA signal transduction histidine kinase	complement(2713288..2715345)	Alkaliphilus metalliredigens QYMF	5312770
YP_001320510.1	CDS	Amet_2699	NC_009633.1	2715349	2716422	R	PFAM: CheB methylesterase; response regulator receiver; KEGG: cth:Cthe_0489 response regulator receiver modulated CheB methylesterase; response regulator receiver modulated CheB methylesterase	complement(2715349..2716422)	Alkaliphilus metalliredigens QYMF	5312771
YP_001320511.1	CDS	Amet_2700	NC_009633.1	2716423	2717079	R	PFAM: type IV pilus assembly PilZ; KEGG: cth:Cthe_0488 type IV pilus assembly PilZ; type IV pilus assembly PilZ	complement(2716423..2717079)	Alkaliphilus metalliredigens QYMF	5312772
YP_001320512.1	CDS	Amet_2701	NC_009633.1	2717096	2718028	R	PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: cth:Cthe_0487 cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase	complement(2717096..2718028)	Alkaliphilus metalliredigens QYMF	5312773
YP_001320513.1	CDS	Amet_2702	NC_009633.1	2718028	2719203	R	PFAM: GTP-binding signal recognition particle SRP54, G- domain; SMART: AAA ATPase; KEGG: cth:Cthe_0486 GTP-binding signal recognition particle SRP54, G-domain; GTP-binding signal recognition particle	complement(2718028..2719203)	Alkaliphilus metalliredigens QYMF	5312774
YP_001320514.1	CDS	Amet_2703	NC_009633.1	2719205	2721232	R	TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein; KEGG: cth:Cthe_0485 flagellar biosynthesis protein FlhA; flagellar biosynthesis protein FlhA	complement(2719205..2721232)	Alkaliphilus metalliredigens QYMF	5312775
YP_001320515.1	CDS	Amet_2704	NC_009633.1	2721244	2722329	R	TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter; KEGG: cth:Cthe_0484 flagellar biosynthetic protein FlhB; flagellar biosynthetic protein FlhB	complement(2721244..2722329)	Alkaliphilus metalliredigens QYMF	5312776
YP_001320516.1	CDS	fliR	NC_009633.1	2722334	2723125	R	FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliR	complement(2722334..2723125)	Alkaliphilus metalliredigens QYMF	5312777
YP_001320517.1	CDS	Amet_2706	NC_009633.1	2723138	2723407	R	TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ, family 3; KEGG: cth:Cthe_0482 flagellar biosynthetic protein FliQ; flagellar biosynthetic protein FliQ	complement(2723138..2723407)	Alkaliphilus metalliredigens QYMF	5312778
YP_001320518.1	CDS	Amet_2707	NC_009633.1	2723422	2724225	R	TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein; KEGG: gme:Gmet_3097 flagellar transport protein FliP; flagellar biosynthetic protein FliP	complement(2723422..2724225)	Alkaliphilus metalliredigens QYMF	5312779
YP_001320519.1	CDS	Amet_2708	NC_009633.1	2724206	2724613	R	hypothetical protein	complement(2724206..2724613)	Alkaliphilus metalliredigens QYMF	5312780
YP_001320520.1	CDS	Amet_2709	NC_009633.1	2724631	2724993	R	PFAM: response regulator receiver; KEGG: cth:Cthe_0479 response regulator receiver protein; response regulator receiver protein	complement(2724631..2724993)	Alkaliphilus metalliredigens QYMF	5312781
YP_001320521.1	CDS	Amet_2710	NC_009633.1	2725128	2726309	R	One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein	complement(2725128..2726309)	Alkaliphilus metalliredigens QYMF	5312782
YP_001320522.1	CDS	Amet_2711	NC_009633.1	2726302	2727297	R	PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM; KEGG: cth:Cthe_0477 flagellar motor switch protein FliM; flagellar motor switch protein FliM	complement(2726302..2727297)	Alkaliphilus metalliredigens QYMF	5312783
YP_001320523.1	CDS	Amet_2712	NC_009633.1	2727310	2727726	R	PFAM: flagellar basal body-associated protein FliL; KEGG: tte:TTE1431 flagellar basal body-associated protein; flagellar basal body-associated protein FliL	complement(2727310..2727726)	Alkaliphilus metalliredigens QYMF	5312784
YP_001320524.1	CDS	Amet_2713	NC_009633.1	2727750	2728481	R	PFAM: OmpA/MotB domain protein; KEGG: mta:Moth_0782 OmpA/MotB; OmpA/MotB domain-containing protein	complement(2727750..2728481)	Alkaliphilus metalliredigens QYMF	5312785
YP_001320525.1	CDS	Amet_2714	NC_009633.1	2728497	2729285	R	PFAM: MotA/TolQ/ExbB proton channel; KEGG: dde:Dde_3589 chemotaxis protein MotA; MotA/TolQ/ExbB proton channel	complement(2728497..2729285)	Alkaliphilus metalliredigens QYMF	5312786
YP_001320526.1	CDS	Amet_2715	NC_009633.1	2729313	2729510	R	PFAM: flagellar FlbD family protein; KEGG: cac:CAC2153 flagellar protein flbD; flagellar FlbD family protein	complement(2729313..2729510)	Alkaliphilus metalliredigens QYMF	5312787
YP_001320527.1	CDS	Amet_2716	NC_009633.1	2729571	2730896	R	PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; KEGG: tte:TTE1433 Flagellar basal body and hook proteins; hypothetical protein	complement(2729571..2730896)	Alkaliphilus metalliredigens QYMF	5312788
YP_001320528.1	CDS	Amet_2717	NC_009633.1	2730976	2731365	R	TIGRFAM: flagellar operon protein; KEGG: cth:Cthe_0473 flagellar operon protein; flagellar operon protein	complement(2730976..2731365)	Alkaliphilus metalliredigens QYMF	5312789
YP_001320529.1	CDS	Amet_2718	NC_009633.1	2731428	2731832	R	PFAM: flagellar hook capping protein; KEGG: cth:Cthe_0472 flagellar hook capping protein; flagellar hook capping protein	complement(2731428..2731832)	Alkaliphilus metalliredigens QYMF	5312790
YP_001320530.1	CDS	Amet_2719	NC_009633.1	2731845	2733242	R	PFAM: flagellar hook-length control protein; KEGG: cth:Cthe_0471 flagellar hook-length control protein; flagellar hook-length control protein	complement(2731845..2733242)	Alkaliphilus metalliredigens QYMF	5312791
YP_001320531.1	CDS	Amet_2720	NC_009633.1	2733265	2734500	R	hypothetical protein	complement(2733265..2734500)	Alkaliphilus metalliredigens QYMF	5312792
YP_001320532.1	CDS	Amet_2721	NC_009633.1	2734512	2734955	R	TIGRFAM: flagellar export protein FliJ; KEGG: cth:Cthe_0469 flagellar export protein FliJ; flagellar export protein FliJ	complement(2734512..2734955)	Alkaliphilus metalliredigens QYMF	5312793
YP_001320533.1	CDS	Amet_2722	NC_009633.1	2734975	2736285	R	KEGG: cth:Cthe_0468 flagellar protein export ATPase FliI; TIGRFAM: ATPase, FliI/YscN family; flagellar protein export ATPase FliI; PFAM: H+-transporting two-sector ATPase, alpha/beta subunit, central region; H+-transporting two-sector ATPase, alpha/beta subunit domain protein; SMART: AAA ATPase; flagellar protein export ATPase FliI	complement(2734975..2736285)	Alkaliphilus metalliredigens QYMF	5312794
YP_001320534.1	CDS	Amet_2723	NC_009633.1	2736275	2737069	R	KEGG: tte:TTE1440 flagellar biosynthesis/type III secretory pathway protein; flagellar biosynthesis/type III secretory pathway protein-like protein	complement(2736275..2737069)	Alkaliphilus metalliredigens QYMF	5312795
YP_001320535.1	CDS	fliG	NC_009633.1	2737062	2738081	R	One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G	complement(2737062..2738081)	Alkaliphilus metalliredigens QYMF	5312796
YP_001320536.1	CDS	Amet_2725	NC_009633.1	2738092	2739645	R	TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring C-terminal domain protein; KEGG: tte:TTE1442 flagellar biosynthesis/type III secretory pathway lipoprotein; flagellar M-ring protein FliF	complement(2738092..2739645)	Alkaliphilus metalliredigens QYMF	5312797
YP_001320537.1	CDS	Amet_2726	NC_009633.1	2739670	2739975	R	TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: cth:Cthe_0464 flagellar hook-basal body complex subunit FliE; flagellar hook-basal body complex subunit FliE	complement(2739670..2739975)	Alkaliphilus metalliredigens QYMF	5312798
YP_001320538.1	CDS	Amet_2727	NC_009633.1	2739990	2740433	R	TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: cth:Cthe_0463 flagellar basal-body rod protein FlgC; flagellar basal-body rod protein FlgC	complement(2739990..2740433)	Alkaliphilus metalliredigens QYMF	5312799
YP_001320539.1	CDS	Amet_2728	NC_009633.1	2740436	2740846	R	TIGRFAM: flagellar basal-body rod protein FlgB; PFAM: flagellar basal body rod protein; KEGG: tte:TTE1445 flagellar basal body protein; flagellar basal-body rod protein FlgB	complement(2740436..2740846)	Alkaliphilus metalliredigens QYMF	5312800
YP_001320540.1	CDS	Amet_2729	NC_009633.1	2741381	2742583	R	PFAM: ATP-binding region, ATPase domain protein; SMART: GAF domain protein; KEGG: plt:Plut_2010 putative PAS/PAC sensor protein; GAF sensor signal transduction histidine kinase	complement(2741381..2742583)	Alkaliphilus metalliredigens QYMF	5312801
YP_001320541.1	CDS	Amet_2731	NC_009633.1	2744109	2745569	D	KEGG: ctc:CTC00917 transposase; transposase	2744109..2745569	Alkaliphilus metalliredigens QYMF	5312803
YP_001320542.1	CDS	Amet_2732	NC_009633.1	2746366	2747319	R	PFAM: response regulator receiver; CheW domain protein; KEGG: bha:BH2262 modulation of CheA activity in response to attractants (chemotaxis protein); putative CheW protein	complement(2746366..2747319)	Alkaliphilus metalliredigens QYMF	5312804
YP_001320543.1	CDS	Amet_2733	NC_009633.1	2747628	2748401	R	PFAM: response regulator receiver; KEGG: cff:CFF8240_0377 DNA-binding response regulator; response regulator receiver protein	complement(2747628..2748401)	Alkaliphilus metalliredigens QYMF	5312805
YP_001320544.1	CDS	Amet_2734	NC_009633.1	2749278	2750057	R	CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase (By similarity). It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; transcriptional repressor CodY	complement(2749278..2750057)	Alkaliphilus metalliredigens QYMF	5312806
YP_001320545.1	CDS	Amet_2735	NC_009633.1	2750382	2752466	R	KEGG: bha:BH2467 DNA topoisomerase I; TIGRFAM: DNA topoisomerase I; PFAM: TOPRIM domain protein; DNA topoisomerase, type IA, central domain protein; DNA topoisomerase, type IA, zn finger domain protein; SMART: DNA topoisomerase I, ATP-binding; DNA topoisomerase I, DNA-binding; Toprim sub domain protein; DNA topoisomerase I	complement(2750382..2752466)	Alkaliphilus metalliredigens QYMF	5312807
YP_001320546.1	CDS	Amet_2736	NC_009633.1	2752539	2753636	R	TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: tte:TTE1450 predicted Rossmann-fold nucleotide-binding protein involved in DNA uptake; DNA protecting protein DprA	complement(2752539..2753636)	Alkaliphilus metalliredigens QYMF	5312808
YP_001320547.1	CDS	Amet_2737	NC_009633.1	2753641	2755176	R	TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase, ChlI subunit; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: cth:Cthe_0455 Mg chelatase, subunit ChlI; Mg chelatase subunit ChlI	complement(2753641..2755176)	Alkaliphilus metalliredigens QYMF	5312809
YP_001320548.1	CDS	Amet_2738	NC_009633.1	2755766	2757034	D	TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein; KEGG: dsy:DSY4027 hypothetical protein; lysine 2,3-aminomutase YodO family protein	2755766..2757034	Alkaliphilus metalliredigens QYMF	5312810
YP_001320549.1	CDS	Amet_2739	NC_009633.1	2757323	2757667	R	PFAM: protein of unknown function UPF0102; KEGG: cac:CAC1763 predicted endonuclease; hypothetical protein	complement(2757323..2757667)	Alkaliphilus metalliredigens QYMF	5312811
YP_001320550.1	CDS	Amet_2740	NC_009633.1	2757709	2758323	R	PFAM: ribonuclease HII/HIII; KEGG: smu:SMU.994 putative ribonuclease HII; ribonuclease H	complement(2757709..2758323)	Alkaliphilus metalliredigens QYMF	5312812
YP_001320551.1	CDS	Amet_2741	NC_009633.1	2758371	2759228	R	PFAM: GTP-binding protein, HSR1-related; KEGG: cno:NT01CX_2207 GTP-binding protein, putative; HSR1-like GTP-binding protein	complement(2758371..2759228)	Alkaliphilus metalliredigens QYMF	5312813
YP_001320552.1	CDS	rplS	NC_009633.1	2759400	2759753	R	this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19	complement(2759400..2759753)	Alkaliphilus metalliredigens QYMF	5312814
YP_001320553.1	CDS	trmD	NC_009633.1	2759859	2760602	R	methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase	complement(2759859..2760602)	Alkaliphilus metalliredigens QYMF	5312815
YP_001320554.1	CDS	rimM	NC_009633.1	2760599	2761105	R	Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM	complement(2760599..2761105)	Alkaliphilus metalliredigens QYMF	5312816
YP_001320555.1	CDS	Amet_2745	NC_009633.1	2761250	2761480	R	KEGG: tte:TTE1460 predicted RNA-binding protein (KH domain); RNA-binding protein	complement(2761250..2761480)	Alkaliphilus metalliredigens QYMF	5312817
YP_001320556.1	CDS	rpsP	NC_009633.1	2761507	2761752	R	binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16	complement(2761507..2761752)	Alkaliphilus metalliredigens QYMF	5312818
YP_001320557.1	CDS	Amet_2747	NC_009633.1	2761810	2763153	R	TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54, G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54, helical bundle; SMART: AAA ATPase; KEGG: cth:Cthe_0770 signal recognition particle protein; signal recognition particle protein	complement(2761810..2763153)	Alkaliphilus metalliredigens QYMF	5312819
YP_001320558.1	CDS	Amet_2748	NC_009633.1	2763173	2763541	R	PFAM: putative helix-turn-helix protein, YlxM/p13 family protein; Sigma-70, region 4 type 2; KEGG: bat:BAS3697 hypothetical protein; putative helix-turn-helix protein, YlxM/p13 family protein	complement(2763173..2763541)	Alkaliphilus metalliredigens QYMF	5312820
YP_001320559.1	CDS	Amet_2749	NC_009633.1	2763675	2764946	R	TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54, G- domain; GTP-binding signal recognition particle SRP54, helical bundle; SMART: AAA ATPase; KEGG: cth:Cthe_0926 signal recognition particle-docking protein FtsY; signal recognition particle-docking protein FtsY	complement(2763675..2764946)	Alkaliphilus metalliredigens QYMF	5312821
YP_001320560.1	CDS	Amet_2750	NC_009633.1	2764957	2768541	R	TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein; KEGG: cth:Cthe_0927 chromosome segregation protein SMC; chromosome segregation protein SMC	complement(2764957..2768541)	Alkaliphilus metalliredigens QYMF	5312822
YP_001320561.1	CDS	Amet_2751	NC_009633.1	2768616	2769659	R	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: tte:TTE1468 ELP3 component of the RNA polymerase II complex, consists of an N-terminal BioB/LipA-like domain and a C-terminal histone acetyltransferase domain (only BioB/LipA-like domain in Thermotoga); radical SAM domain-containing protein	complement(2768616..2769659)	Alkaliphilus metalliredigens QYMF	5312823
YP_001320562.1	CDS	rnc	NC_009633.1	2769652	2770371	R	cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III	complement(2769652..2770371)	Alkaliphilus metalliredigens QYMF	5312824
YP_001320563.1	CDS	Amet_2753	NC_009633.1	2770651	2771895	R	PFAM: Beta-ketoacyl synthase-like; KEGG: tte:TTE1470 3-oxoacyl-(acyl-carrier-protein) synthase; beta-ketoacyl synthase-like protein	complement(2770651..2771895)	Alkaliphilus metalliredigens QYMF	5312825
YP_001320564.1	CDS	Amet_2754	NC_009633.1	2771947	2772177	R	TIGRFAM: acyl carrier protein; PFAM: phosphopantetheine-binding; KEGG: cac:CAC1747 acyl carrier protein, ACP; acyl carrier protein	complement(2771947..2772177)	Alkaliphilus metalliredigens QYMF	5312826
YP_001320565.1	CDS	Amet_2755	NC_009633.1	2772273	2773019	R	TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: cno:NT01CX_0925 3-oxoacyl-(acyl-carrier-protein) reductase; 3-oxoacyl-(acyl-carrier-protein) reductase	complement(2772273..2773019)	Alkaliphilus metalliredigens QYMF	5312827
YP_001320566.1	CDS	Amet_2756	NC_009633.1	2773028	2773972	R	TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: cth:Cthe_0935 malonyl CoA-acyl carrier protein transacylase; malonyl CoA-acyl carrier protein transacylase	complement(2773028..2773972)	Alkaliphilus metalliredigens QYMF	5312828
YP_001320567.1	CDS	Amet_2757	NC_009633.1	2773977	2774927	R	PFAM: 2-nitropropane dioxygenase, NPD; KEGG: tte:TTE1474 dioxygenases related to 2-nitropropane dioxygenase; 2-nitropropane dioxygenase	complement(2773977..2774927)	Alkaliphilus metalliredigens QYMF	5312829
YP_001320568.1	CDS	Amet_2758	NC_009633.1	2774929	2775942	R	FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase	complement(2774929..2775942)	Alkaliphilus metalliredigens QYMF	5312830
YP_001320569.1	CDS	Amet_2759	NC_009633.1	2775935	2776942	R	involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; putative glycerol-3-phosphate acyltransferase PlsX	complement(2775935..2776942)	Alkaliphilus metalliredigens QYMF	5312831
YP_001320570.1	CDS	Amet_2760	NC_009633.1	2776958	2777539	R	negative regulator of genes involved in fatty acid and phospholipid biosynthesis for gram positive bacteria; fatty acid biosynthesis transcriptional regulator	complement(2776958..2777539)	Alkaliphilus metalliredigens QYMF	5312832
YP_001320571.1	CDS	rpmF	NC_009633.1	2777768	2777947	R	some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32	complement(2777768..2777947)	Alkaliphilus metalliredigens QYMF	5312833
YP_001320572.1	CDS	Amet_2762	NC_009633.1	2777962	2778492	R	PFAM: protein of unknown function DUF177; KEGG: ctc:CTC01241 hypothetical protein; hypothetical protein	complement(2777962..2778492)	Alkaliphilus metalliredigens QYMF	5312834
YP_001320573.1	CDS	Amet_2763	NC_009633.1	2778634	2779824	R	AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase	complement(2778634..2779824)	Alkaliphilus metalliredigens QYMF	5312835
YP_001320574.1	CDS	Amet_2764	NC_009633.1	2780123	2781397	D	PFAM: protein of unknown function DUF795; KEGG: cth:Cthe_1301 protein of unknown function DUF795; hypothetical protein	2780123..2781397	Alkaliphilus metalliredigens QYMF	5312836
YP_001320575.1	CDS	Amet_2765	NC_009633.1	2781565	2782806	D	TIGRFAM: Sporulation integral membrane protein YlbJ; PFAM: nucleoside recognition domain protein; KEGG: cth:Cthe_1274 nucleoside recognition; sporulation integral membrane protein YlbJ	2781565..2782806	Alkaliphilus metalliredigens QYMF	5312837
YP_001320576.1	CDS	Amet_2766	NC_009633.1	2782803	2783252	R	KEGG: tte:TTE1485 archaeal/vacuolar-type H+-ATPase subunit H; H+-ATPase subunit H	complement(2782803..2783252)	Alkaliphilus metalliredigens QYMF	5312838
YP_001320577.1	CDS	coaD	NC_009633.1	2783291	2783764	R	Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase	complement(2783291..2783764)	Alkaliphilus metalliredigens QYMF	5312839
YP_001320578.1	CDS	Amet_2768	NC_009633.1	2783761	2784324	R	TIGRFAM: putative methyltransferase; PFAM: conserved hypothetical protein 95; KEGG: cth:Cthe_1277 putative methyltransferase; putative methyltransferase	complement(2783761..2784324)	Alkaliphilus metalliredigens QYMF	5312840
YP_001320579.1	CDS	Amet_2769	NC_009633.1	2784464	2784688	R	PFAM: small acid-soluble spore protein, alpha/beta type; KEGG: sth:STH1431 small acid-soluble spore protein; alpha/beta type small acid-soluble spore protein	complement(2784464..2784688)	Alkaliphilus metalliredigens QYMF	5312841
YP_001320580.1	CDS	Amet_2770	NC_009633.1	2784770	2786830	R	catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG	complement(2784770..2786830)	Alkaliphilus metalliredigens QYMF	5312842
YP_001320581.1	CDS	Amet_2771	NC_009633.1	2786914	2788542	R	PFAM: Dak phosphatase; KEGG: cpr:CPR_1703 DAK2 domain protein; Dak phosphatase	complement(2786914..2788542)	Alkaliphilus metalliredigens QYMF	5312843
YP_001320582.1	CDS	Amet_2772	NC_009633.1	2788561	2788917	R	PFAM: protein of unknown function DUF322; KEGG: cno:NT01CX_2234 alkaline shock protein, putative; hypothetical protein	complement(2788561..2788917)	Alkaliphilus metalliredigens QYMF	5312844
YP_001320583.1	CDS	rpmB	NC_009633.1	2789232	2789423	D	required for 70S ribosome assembly; 50S ribosomal protein L28	2789232..2789423	Alkaliphilus metalliredigens QYMF	5312845
YP_001320584.1	CDS	Amet_2775	NC_009633.1	2790323	2792197	R	PFAM: transposase, IS4 family protein; KEGG: tte:TTE2604 transposase; transposase, IS4 family protein	complement(2790323..2792197)	Alkaliphilus metalliredigens QYMF	5312847
YP_001320585.1	CDS	Amet_2776	NC_009633.1	2792412	2793047	R	TIGRFAM: thiamine pyrophosphokinase; PFAM: Thiamin pyrophosphokinase, catalytic region; KEGG: tte:TTE1497 thiamine pyrophosphokinase; thiamine pyrophosphokinase	complement(2792412..2793047)	Alkaliphilus metalliredigens QYMF	5312848
YP_001320586.1	CDS	Amet_2777	NC_009633.1	2793060	2793722	R	PFAM: ribulose-phosphate 3-epimerase; KEGG: cth:Cthe_0576 ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase	complement(2793060..2793722)	Alkaliphilus metalliredigens QYMF	5312849
YP_001320587.1	CDS	Amet_2778	NC_009633.1	2793725	2794603	R	TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC; KEGG: tte:TTE1499 predicted GTPases; ribosome small subunit-dependent GTPase A	complement(2793725..2794603)	Alkaliphilus metalliredigens QYMF	5312850
YP_001320588.1	CDS	Amet_2779	NC_009633.1	2794615	2796561	R	PFAM: protein of unknown function RIO1; protein kinase; tyrosine protein kinase; PASTA domain containing protein; SMART: serine/threonine protein kinase; KEGG: cth:Cthe_0574 serine/threonine protein kinase; protein kinase	complement(2794615..2796561)	Alkaliphilus metalliredigens QYMF	5312851
YP_001320589.1	CDS	Amet_2780	NC_009633.1	2796566	2797315	R	PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: cth:Cthe_0573 protein serine/threonine phosphatases; protein phosphatase 2C-like protein	complement(2796566..2797315)	Alkaliphilus metalliredigens QYMF	5312852
YP_001320590.1	CDS	Amet_2781	NC_009633.1	2797346	2798404	R	23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N	complement(2797346..2798404)	Alkaliphilus metalliredigens QYMF	5312853
YP_001320591.1	CDS	Amet_2782	NC_009633.1	2798428	2799762	R	TIGRFAM: sun protein; putative RNA methylase, NOL1/NOP2/sun family; transcription antitermination factor NusB; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: cth:Cthe_0571 sun protein; sun protein	complement(2798428..2799762)	Alkaliphilus metalliredigens QYMF	5312854
YP_001320592.1	CDS	Amet_2783	NC_009633.1	2799878	2800573	R	PFAM: peptidase, membrane zinc metallopeptidase, putative; KEGG: ctc:CTC01221 hypothetical protein; peptidase, membrane zinc metallopeptidase	complement(2799878..2800573)	Alkaliphilus metalliredigens QYMF	5312855
YP_001320593.1	CDS	Amet_2784	NC_009633.1	2800578	2801351	R	PFAM: protein of unknown function DUF116; KEGG: mta:Moth_0899 hypothetical protein; hypothetical protein	complement(2800578..2801351)	Alkaliphilus metalliredigens QYMF	5312856
YP_001320594.1	CDS	Amet_2785	NC_009633.1	2801341	2802285	R	TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: ctc:CTC01220 methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase	complement(2801341..2802285)	Alkaliphilus metalliredigens QYMF	5312857
YP_001320595.1	CDS	def	NC_009633.1	2802296	2802739	R	cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase	complement(2802296..2802739)	Alkaliphilus metalliredigens QYMF	5312858
YP_001320596.1	CDS	Amet_2787	NC_009633.1	2802767	2805256	R	TIGRFAM: primosomal protein N'; PFAM: helicase domain protein; type III restriction protein, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: cth:Cthe_0566 primosomal protein N'; primosomal protein N'	complement(2802767..2805256)	Alkaliphilus metalliredigens QYMF	5312859
YP_001320597.1	CDS	Amet_2788	NC_009633.1	2805414	2806610	R	TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein; KEGG: cth:Cthe_1313 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase	complement(2805414..2806610)	Alkaliphilus metalliredigens QYMF	5312860
YP_001320598.1	CDS	rpoZ	NC_009633.1	2806623	2806829	R	Promotes RNA polymerase assembly; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega	complement(2806623..2806829)	Alkaliphilus metalliredigens QYMF	5312861
YP_001320599.1	CDS	gmk	NC_009633.1	2806843	2807445	R	Essential for recycling GMP and indirectly, cGMP; guanylate kinase	complement(2806843..2807445)	Alkaliphilus metalliredigens QYMF	5312862
YP_001320600.1	CDS	Amet_2791	NC_009633.1	2807468	2807752	R	PFAM: protein of unknown function DUF370; KEGG: cth:Cthe_1316 protein of unknown function DUF370; hypothetical protein	complement(2807468..2807752)	Alkaliphilus metalliredigens QYMF	5312863
YP_001320601.1	CDS	Amet_2792	NC_009633.1	2807772	2808653	R	PFAM: YicC N-terminal domain protein; domain of unknown function DUF1732; KEGG: cth:Cthe_1317 hypothetical protein; hypothetical protein	complement(2807772..2808653)	Alkaliphilus metalliredigens QYMF	5312864
YP_001320602.1	CDS	dapF	NC_009633.1	2808671	2809522	R	involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase	complement(2808671..2809522)	Alkaliphilus metalliredigens QYMF	5312865
YP_001320603.1	CDS	Amet_2794	NC_009633.1	2809862	2811640	D	PFAM: protein of unknown function DUF814; Fibronectin-binding A domain protein; KEGG: cth:Cthe_0581 fibronectin-binding A-like protein; fibronectin-binding A domain-containing protein	2809862..2811640	Alkaliphilus metalliredigens QYMF	5312866
YP_001320604.1	CDS	Amet_2795	NC_009633.1	2811698	2812246	R	PFAM: phosphoribosyltransferase; KEGG: swo:Swol_1285 uracil phosphoribosyltransferase; uracil phosphoribosyltransferase	complement(2811698..2812246)	Alkaliphilus metalliredigens QYMF	5312867
YP_001320605.1	CDS	Amet_2796	NC_009633.1	2812272	2813204	R	TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: tte:TTE1538 Pseudouridylate synthase, 23S RNA-specific; RluA family pseudouridine synthase	complement(2812272..2813204)	Alkaliphilus metalliredigens QYMF	5312868
YP_001320606.1	CDS	Amet_2797	NC_009633.1	2813219	2813662	R	lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase	complement(2813219..2813662)	Alkaliphilus metalliredigens QYMF	5312869
YP_001320607.1	CDS	Amet_2798	NC_009633.1	2813889	2814563	R	TIGRFAM: Sporulation protein YteA; KEGG: tte:TTE1572 DnaK suppressor protein; TraR/DksA family transcriptional regulator	complement(2813889..2814563)	Alkaliphilus metalliredigens QYMF	5312870
YP_001320608.1	CDS	Amet_2799	NC_009633.1	2814840	2815535	R	PFAM: purine or other phosphorylase, family 1; KEGG: fnu:FN1015 5'-methylthioadenosine nucleosidase; adenosylhomocysteine nucleosidase	complement(2814840..2815535)	Alkaliphilus metalliredigens QYMF	5312871
YP_001320609.1	CDS	Amet_2800	NC_009633.1	2815699	2816160	R	PFAM: DivIVA family protein; KEGG: tte:TTE1596 Cell division initiation protein; DivIVA family protein	complement(2815699..2816160)	Alkaliphilus metalliredigens QYMF	5312872
YP_001320610.1	CDS	Amet_2801	NC_009633.1	2816175	2816963	R	PFAM: RNA-binding S4 domain protein; KEGG: tte:TTE1597 hypothetical protein; RNA-binding S4 domain-containing protein	complement(2816175..2816963)	Alkaliphilus metalliredigens QYMF	5312873
YP_001320611.1	CDS	Amet_2802	NC_009633.1	2816994	2817278	R	PFAM: protein of unknown function YGGT; KEGG: mgm:Mmc1_3655 protein of unknown function YGGT; hypothetical protein	complement(2816994..2817278)	Alkaliphilus metalliredigens QYMF	5312874
YP_001320612.1	CDS	Amet_2803	NC_009633.1	2817294	2817740	R	PFAM: protein of unknown function DUF552; KEGG: cth:Cthe_0791 protein of unknown function DUF552; hypothetical protein	complement(2817294..2817740)	Alkaliphilus metalliredigens QYMF	5312875
YP_001320613.1	CDS	Amet_2804	NC_009633.1	2817751	2818446	R	PFAM: alanine racemase domain protein; KEGG: cth:Cthe_0792 protein of unknown function UPF0001; alanine racemase domain-containing protein	complement(2817751..2818446)	Alkaliphilus metalliredigens QYMF	5312876
YP_001320614.1	CDS	Amet_2805	NC_009633.1	2818463	2819725	R	KEGG: tte:TTE1601 membrane-fusion protein; hypothetical protein	complement(2818463..2819725)	Alkaliphilus metalliredigens QYMF	5312877
YP_001320615.1	CDS	Amet_2806	NC_009633.1	2819940	2820323	R	hypothetical protein	complement(2819940..2820323)	Alkaliphilus metalliredigens QYMF	5312878
YP_001320616.1	CDS	Amet_2807	NC_009633.1	2820404	2820571	R	hypothetical protein	complement(2820404..2820571)	Alkaliphilus metalliredigens QYMF	5312879
YP_001320617.1	CDS	Amet_2808	NC_009633.1	2821014	2822213	D	TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: CBS domain containing protein; ABC transporter related; SMART: AAA ATPase; KEGG: oih:OB3456 glycine betaine ABC transporter ATP-binding protein; glycine betaine/L-proline ABC transporter ATPase	2821014..2822213	Alkaliphilus metalliredigens QYMF	5312880
YP_001320618.1	CDS	Amet_2809	NC_009633.1	2822203	2823066	D	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ctc:CTC02341 putative glycine-betaine binding permease protein; binding-protein-dependent transport system inner membrane protein	2822203..2823066	Alkaliphilus metalliredigens QYMF	5312881
YP_001320619.1	CDS	Amet_2810	NC_009633.1	2823076	2823945	D	PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: aeh:Mlg_0734 response regulator receiver protein; glycine betaine ABC transporter substrate-binding protein	2823076..2823945	Alkaliphilus metalliredigens QYMF	5312882
YP_001320620.1	CDS	Amet_2811	NC_009633.1	2824062	2825066	R	hypothetical protein	complement(2824062..2825066)	Alkaliphilus metalliredigens QYMF	5312883
YP_001320621.1	CDS	Amet_2812	NC_009633.1	2825235	2826440	R	PFAM: inner-membrane translocator; KEGG: mta:Moth_2020 inner-membrane translocator; monosaccharide-transporting ATPase	complement(2825235..2826440)	Alkaliphilus metalliredigens QYMF	5312884
YP_001320622.1	CDS	Amet_2813	NC_009633.1	2826455	2828002	R	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mta:Moth_2021 ABC transporter related; ABC transporter-like protein	complement(2826455..2828002)	Alkaliphilus metalliredigens QYMF	5312885
YP_001320623.1	CDS	Amet_2814	NC_009633.1	2828078	2829139	R	PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: mta:Moth_2022 periplasmic binding protein/LacI transcriptional regulator; monosaccharide-transporting ATPase	complement(2828078..2829139)	Alkaliphilus metalliredigens QYMF	5312886
YP_001320624.1	CDS	Amet_2815	NC_009633.1	2829530	2830609	R	PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: tte:TTE0289 Periplasmic sugar-binding proteins; monosaccharide-transporting ATPase	complement(2829530..2830609)	Alkaliphilus metalliredigens QYMF	5312887
YP_001320625.1	CDS	Amet_2816	NC_009633.1	2830626	2832215	R	PFAM: helix-turn-helix- domain containing protein, AraC type; response regulator receiver; KEGG: tte:TTE0288 CheY-like receiver domains; response regulator receiver protein	complement(2830626..2832215)	Alkaliphilus metalliredigens QYMF	5312888
YP_001320626.1	CDS	Amet_2817	NC_009633.1	2832208	2833719	R	PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase internal region; KEGG: tte:TTE0287 predicted ATPase; histidine kinase internal subunit	complement(2832208..2833719)	Alkaliphilus metalliredigens QYMF	5312889
YP_001320627.1	CDS	Amet_2818	NC_009633.1	2833731	2834744	R	KEGG: tte:TTE0286 periplasmic sugar-binding proteins; periplasmic sugar-binding protein	complement(2833731..2834744)	Alkaliphilus metalliredigens QYMF	5312890
YP_001320628.1	CDS	Amet_2819	NC_009633.1	2835062	2835964	R	PFAM: TPR repeat-containing protein; Sel1 domain protein repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ctc:CTC01770 conserved protein, tetratricopeptide repeat family protein; hypothetical protein	complement(2835062..2835964)	Alkaliphilus metalliredigens QYMF	5312891
YP_001320629.1	CDS	Amet_2820	NC_009633.1	2836093	2836893	D	PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: sth:STH2737 glycerophosphodiester phosphodiesterase; glycerophosphoryl diester phosphodiesterase	2836093..2836893	Alkaliphilus metalliredigens QYMF	5312892
YP_001320630.1	CDS	Amet_2821	NC_009633.1	2837128	2837964	D	S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine; S-adenosylmethionine decarboxylase	2837128..2837964	Alkaliphilus metalliredigens QYMF	5312893
YP_001320631.1	CDS	Amet_2822	NC_009633.1	2838156	2840471	R	PFAM: AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: cno:NT01CX_0220 negative regulator of genetic competence ClpC/MecB; ATPase	complement(2838156..2840471)	Alkaliphilus metalliredigens QYMF	5312894
YP_001320632.1	CDS	Amet_2823	NC_009633.1	2840871	2841773	R	PFAM: protein of unknown function DUF477; KEGG: tma:TM0962 hypothetical protein; hypothetical protein	complement(2840871..2841773)	Alkaliphilus metalliredigens QYMF	5312895
YP_001320633.1	CDS	Amet_2824	NC_009633.1	2841849	2842418	R	PFAM: LemA family protein; KEGG: sat:SYN_00535 LemA family protein; LemA family protein	complement(2841849..2842418)	Alkaliphilus metalliredigens QYMF	5312896
YP_001320634.1	CDS	Amet_2825	NC_009633.1	2842616	2843314	R	PFAM: Peptidoglycan-binding LysM; KEGG: mta:Moth_1271 peptidoglycan-binding LysM; peptidoglycan-binding protein LysM	complement(2842616..2843314)	Alkaliphilus metalliredigens QYMF	5312897
YP_001320635.1	CDS	Amet_2826	NC_009633.1	2843594	2844478	R	PFAM: nitroreductase; KEGG: dsy:DSY1470 hypothetical protein; nitroreductase	complement(2843594..2844478)	Alkaliphilus metalliredigens QYMF	5312898
YP_001320636.1	CDS	Amet_2827	NC_009633.1	2844513	2844950	R	hypothetical protein	complement(2844513..2844950)	Alkaliphilus metalliredigens QYMF	5312899
YP_001320637.1	CDS	Amet_2828	NC_009633.1	2845207	2846469	R	PFAM: major facilitator superfamily MFS_1; KEGG: pac:PPA1089 putative oxalate/formate-specific permease; major facilitator superfamily transporter	complement(2845207..2846469)	Alkaliphilus metalliredigens QYMF	5312900
YP_001320638.1	CDS	Amet_2829	NC_009633.1	2846807	2846920	R	hypothetical protein	complement(2846807..2846920)	Alkaliphilus metalliredigens QYMF	5312901
YP_001320639.1	CDS	Amet_2830	NC_009633.1	2847092	2847229	R	hypothetical protein	complement(2847092..2847229)	Alkaliphilus metalliredigens QYMF	5312902
YP_001320640.1	CDS	Amet_2831	NC_009633.1	2847661	2848581	R	hypothetical protein	complement(2847661..2848581)	Alkaliphilus metalliredigens QYMF	5312904
YP_001320641.1	CDS	Amet_2832	NC_009633.1	2848583	2848921	R	KEGG: swo:Swol_1305 hypothetical protein; hypothetical protein	complement(2848583..2848921)	Alkaliphilus metalliredigens QYMF	5312905
YP_001320642.1	CDS	Amet_2833	NC_009633.1	2848980	2849282	R	hypothetical protein	complement(2848980..2849282)	Alkaliphilus metalliredigens QYMF	5312906
YP_001320643.1	CDS	Amet_2834	NC_009633.1	2849419	2849790	R	hypothetical protein	complement(2849419..2849790)	Alkaliphilus metalliredigens QYMF	5312907
YP_001320644.1	CDS	Amet_2835	NC_009633.1	2849811	2850569	R	KEGG: cac:CAC0060 predicted membrane protein; hypothetical protein	complement(2849811..2850569)	Alkaliphilus metalliredigens QYMF	5312908
YP_001320645.1	CDS	Amet_2836	NC_009633.1	2851224	2852552	R	PFAM: phage portal protein, SPP1; KEGG: swo:Swol_1309 hypothetical protein; phage portal protein, SPP1	complement(2851224..2852552)	Alkaliphilus metalliredigens QYMF	5312909
YP_001320646.1	CDS	Amet_2837	NC_009633.1	2852610	2854169	R	KEGG: swo:Swol_1310 hypothetical protein; hypothetical protein	complement(2852610..2854169)	Alkaliphilus metalliredigens QYMF	5312910
YP_001320647.1	CDS	Amet_2838	NC_009633.1	2854159	2854551	R	hypothetical protein	complement(2854159..2854551)	Alkaliphilus metalliredigens QYMF	5312911
YP_001320648.1	CDS	Amet_2839	NC_009633.1	2854552	2854671	R	hypothetical protein	complement(2854552..2854671)	Alkaliphilus metalliredigens QYMF	5312912
YP_001320649.1	CDS	Amet_2840	NC_009633.1	2855060	2856772	R	hypothetical protein	complement(2855060..2856772)	Alkaliphilus metalliredigens QYMF	5312913
YP_001320650.1	CDS	Amet_2841	NC_009633.1	2856784	2856951	R	hypothetical protein	complement(2856784..2856951)	Alkaliphilus metalliredigens QYMF	5312914
YP_001320651.1	CDS	Amet_2842	NC_009633.1	2856996	2857232	R	hypothetical protein	complement(2856996..2857232)	Alkaliphilus metalliredigens QYMF	5312915
YP_001320652.1	CDS	Amet_2843	NC_009633.1	2857229	2857705	R	KEGG: swo:Swol_1313 hypothetical protein; hypothetical protein	complement(2857229..2857705)	Alkaliphilus metalliredigens QYMF	5312916
YP_001320653.1	CDS	Amet_2844	NC_009633.1	2857768	2857977	R	hypothetical protein	complement(2857768..2857977)	Alkaliphilus metalliredigens QYMF	5312917
YP_001320654.1	CDS	Amet_2845	NC_009633.1	2857981	2858724	R	PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: dsy:DSY0836 hypothetical protein; IstB ATP binding domain-containing protein	complement(2857981..2858724)	Alkaliphilus metalliredigens QYMF	5312918
YP_001320655.1	CDS	Amet_2846	NC_009633.1	2858712	2860265	R	PFAM: Integrase, catalytic region; KEGG: bha:BH3965 transposase (22); integrase catalytic subunit	complement(2858712..2860265)	Alkaliphilus metalliredigens QYMF	5312919
YP_001320656.1	CDS	Amet_2847	NC_009633.1	2860335	2860814	R	KEGG: swo:Swol_1313 hypothetical protein; hypothetical protein	complement(2860335..2860814)	Alkaliphilus metalliredigens QYMF	5312920
YP_001320657.1	CDS	Amet_2848	NC_009633.1	2860914	2861057	R	hypothetical protein	complement(2860914..2861057)	Alkaliphilus metalliredigens QYMF	5312921
YP_001320658.1	CDS	Amet_2849	NC_009633.1	2861232	2862065	R	KEGG: spb:M28_Spy1244 major head protein; hypothetical protein	complement(2861232..2862065)	Alkaliphilus metalliredigens QYMF	5312922
YP_001320659.1	CDS	Amet_2850	NC_009633.1	2862179	2862583	R	hypothetical protein	complement(2862179..2862583)	Alkaliphilus metalliredigens QYMF	5312923
YP_001320660.1	CDS	Amet_2851	NC_009633.1	2862749	2862925	R	hypothetical protein	complement(2862749..2862925)	Alkaliphilus metalliredigens QYMF	5312924
YP_001320661.1	CDS	Amet_2852	NC_009633.1	2863542	2866196	R	KEGG: cac:CAC1139 phage related protein, YonO B.subtilis homolog; phage-like protein	complement(2863542..2866196)	Alkaliphilus metalliredigens QYMF	5312925
YP_001320662.1	CDS	Amet_2853	NC_009633.1	2866664	2867629	R	PFAM: phage integrase family protein; KEGG: gka:GK2913 integrase/recombinase; phage integrase family protein	complement(2866664..2867629)	Alkaliphilus metalliredigens QYMF	5312926
YP_001320663.1	CDS	Amet_2854	NC_009633.1	2868023	2869501	R	TIGRFAM: Sporulation stage IV, protein A; KEGG: cth:Cthe_1021 stage IV sporulation protein A; sporulation stage IV, protein A	complement(2868023..2869501)	Alkaliphilus metalliredigens QYMF	5312928
YP_001320664.1	CDS	Amet_2855	NC_009633.1	2869788	2870819	R	PFAM: NADP oxidoreductase, coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE, N-terminal domain protein; KEGG: mta:Moth_1320 NAD-dependent glycerol-3-phosphate dehydrogenase-like; glycerol-3-phosphate dehydrogenase (NAD(P)(+))	complement(2869788..2870819)	Alkaliphilus metalliredigens QYMF	5312929
YP_001320665.1	CDS	Amet_2856	NC_009633.1	2870837	2871424	R	PFAM: protein of unknown function DUF205; KEGG: tte:TTE1618 hypothetical protein; hypothetical protein	complement(2870837..2871424)	Alkaliphilus metalliredigens QYMF	5312930
YP_001320666.1	CDS	engA	NC_009633.1	2871428	2872750	R	EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA	complement(2871428..2872750)	Alkaliphilus metalliredigens QYMF	5312931
YP_001320667.1	CDS	Amet_2858	NC_009633.1	2872756	2874102	R	PFAM: protein of unknown function DUF512; KEGG: cth:Cthe_1025 protein of unknown function DUF512; response regulator receiver protein	complement(2872756..2874102)	Alkaliphilus metalliredigens QYMF	5312932
YP_001320668.1	CDS	Amet_2859	NC_009633.1	2874232	2874690	R	KEGG: tte:TTE1621 hypothetical protein; hypothetical protein	complement(2874232..2874690)	Alkaliphilus metalliredigens QYMF	5312933
YP_001320669.1	CDS	Amet_2860	NC_009633.1	2874687	2875022	R	hypothetical protein	complement(2874687..2875022)	Alkaliphilus metalliredigens QYMF	5312934
YP_001320670.1	CDS	Amet_2861	NC_009633.1	2875036	2875230	R	KEGG: swo:Swol_1337 hypothetical protein; hypothetical protein	complement(2875036..2875230)	Alkaliphilus metalliredigens QYMF	5312935
YP_001320671.1	CDS	Amet_2862	NC_009633.1	2875243	2876160	R	KEGG: tte:TTE1624 hypothetical protein; hypothetical protein	complement(2875243..2876160)	Alkaliphilus metalliredigens QYMF	5312936
YP_001320672.1	CDS	Amet_2863	NC_009633.1	2876172	2877374	R	PFAM: Stage II sporulation P family protein; KEGG: tte:TTE1625 stage II sporulation protein P; stage II sporulation P family protein	complement(2876172..2877374)	Alkaliphilus metalliredigens QYMF	5312937
YP_001320673.1	CDS	Amet_2864	NC_009633.1	2877364	2878122	R	KEGG: tte:TTE1626 hypothetical protein; hypothetical protein	complement(2877364..2878122)	Alkaliphilus metalliredigens QYMF	5312938
YP_001320674.1	CDS	Amet_2865	NC_009633.1	2878275	2880041	R	KEGG: cth:Cthe_1393 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase	complement(2878275..2880041)	Alkaliphilus metalliredigens QYMF	5312939
YP_001320675.1	CDS	Amet_2866	NC_009633.1	2880050	2880739	R	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cpf:CPF_0623 DNA-binding response regulator; two component transcriptional regulator	complement(2880050..2880739)	Alkaliphilus metalliredigens QYMF	5312940
YP_001320676.1	CDS	Amet_2867	NC_009633.1	2880755	2881552	R	PFAM: protein of unknown function DUF152; KEGG: tte:TTE0179 conserved hypothetical protein; hypothetical protein	complement(2880755..2881552)	Alkaliphilus metalliredigens QYMF	5312941
YP_001320677.1	CDS	nrdR	NC_009633.1	2881651	2882118	R	PFAM: ATP-cone domain protein; KEGG: cth:Cthe_0450 ribonucleotide reductase regulator NrdR-like protein; transcriptional regulator NrdR	complement(2881651..2882118)	Alkaliphilus metalliredigens QYMF	5312942
YP_001320678.1	CDS	Amet_2869	NC_009633.1	2882204	2882500	R	TIGRFAM: Sporulation protein YlmC/YmxH; PFAM: PRC-barrel domain protein; KEGG: cth:Cthe_0449 hypothetical protein; sporulation protein YlmC/YmxH	complement(2882204..2882500)	Alkaliphilus metalliredigens QYMF	5312943
YP_001320679.1	CDS	Amet_2870	NC_009633.1	2882672	2883445	R	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed after engulfment; this factor is involved in the transcription of small acid-soluble proteins involved in protecting the forespore chromatin; sporulation sigma factor SigG	complement(2882672..2883445)	Alkaliphilus metalliredigens QYMF	5312944
YP_001320680.1	CDS	Amet_2871	NC_009633.1	2883542	2884276	R	sigma-29; sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed in the mother cell at the onset of sporulation; sporulation sigma factor SigE	complement(2883542..2884276)	Alkaliphilus metalliredigens QYMF	5312945
YP_001320681.1	CDS	Amet_2872	NC_009633.1	2884309	2885199	R	PFAM: peptidase U4, sporulation factor SpoIIGA; KEGG: cth:Cthe_0446 peptidase U4, sporulation factor SpoIIGA; peptidase U4, sporulation factor SpoIIGA	complement(2884309..2885199)	Alkaliphilus metalliredigens QYMF	5312946
YP_001320682.1	CDS	Amet_2873	NC_009633.1	2885489	2886583	R	TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ, GTPase; Tubulin/FtsZ domain protein; KEGG: cth:Cthe_0445 cell division protein FtsZ; cell division protein FtsZ	complement(2885489..2886583)	Alkaliphilus metalliredigens QYMF	5312947
YP_001320683.1	CDS	Amet_2874	NC_009633.1	2886783	2887139	R	PFAM: protein of unknown function DUF1290; KEGG: tte:TTE1641 small basic protein; hypothetical protein	complement(2886783..2887139)	Alkaliphilus metalliredigens QYMF	5312948
YP_001320684.1	CDS	Amet_2875	NC_009633.1	2887143	2887865	R	PFAM: protein of unknown function DUF881; KEGG: tte:TTE1642 hypothetical protein; hypothetical protein	complement(2887143..2887865)	Alkaliphilus metalliredigens QYMF	5312949
YP_001320685.1	CDS	Amet_2876	NC_009633.1	2887891	2888628	R	PFAM: protein of unknown function DUF881; KEGG: tte:TTE1642 hypothetical protein; hypothetical protein	complement(2887891..2888628)	Alkaliphilus metalliredigens QYMF	5312950
YP_001320686.1	CDS	Amet_2877	NC_009633.1	2888628	2889416	R	PFAM: Polypeptide-transport-associated protein domain protein, FtsQ-type; KEGG: tte:TTE1643 cell division septal protein; polypeptide-transport-associated domain-containing protein	complement(2888628..2889416)	Alkaliphilus metalliredigens QYMF	5312951
YP_001320687.1	CDS	Amet_2878	NC_009633.1	2889512	2890765	R	adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase	complement(2889512..2890765)	Alkaliphilus metalliredigens QYMF	5312952
YP_001320688.1	CDS	murG	NC_009633.1	2890890	2891990	R	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase	complement(2890890..2891990)	Alkaliphilus metalliredigens QYMF	5312953
YP_001320689.1	CDS	Amet_2880	NC_009633.1	2891996	2893114	R	TIGRFAM: cell division protein FtsW; stage V sporulation protein E; PFAM: cell cycle protein; KEGG: tte:TTE1646 Bacterial cell division membrane protein; stage V sporulation protein E	complement(2891996..2893114)	Alkaliphilus metalliredigens QYMF	5312954
YP_001320690.1	CDS	murD	NC_009633.1	2893116	2894483	R	UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase	complement(2893116..2894483)	Alkaliphilus metalliredigens QYMF	5312955
YP_001320691.1	CDS	mraY	NC_009633.1	2894500	2895495	R	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase	complement(2894500..2895495)	Alkaliphilus metalliredigens QYMF	5312956
YP_001320692.1	CDS	Amet_2883	NC_009633.1	2895504	2896895	R	TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase, middle domain protein; KEGG: cth:Cthe_0977 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase	complement(2895504..2896895)	Alkaliphilus metalliredigens QYMF	5312957
YP_001320693.1	CDS	murE	NC_009633.1	2896873	2898357	R	involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase	complement(2896873..2898357)	Alkaliphilus metalliredigens QYMF	5312958
YP_001320694.1	CDS	Amet_2885	NC_009633.1	2898499	2900670	R	PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; PASTA domain containing protein; KEGG: tte:TTE1651 Cell division protein FtsI/penicillin-binding protein 2; peptidoglycan glycosyltransferase	complement(2898499..2900670)	Alkaliphilus metalliredigens QYMF	5312959
YP_001320695.1	CDS	Amet_2886	NC_009633.1	2900685	2901182	R	KEGG: tte:TTE1652 hypothetical protein; hypothetical protein	complement(2900685..2901182)	Alkaliphilus metalliredigens QYMF	5312960
YP_001320696.1	CDS	mraW	NC_009633.1	2901214	2902149	R	TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: ctc:CTC01635 S-adenosyl-methyltransferase mraW; S-adenosyl-methyltransferase MraW	complement(2901214..2902149)	Alkaliphilus metalliredigens QYMF	5312961
YP_001320697.1	CDS	Amet_2888	NC_009633.1	2902177	2902608	R	MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ	complement(2902177..2902608)	Alkaliphilus metalliredigens QYMF	5312962
YP_001320698.1	CDS	Amet_2889	NC_009633.1	2902802	2902957	R	hypothetical protein	complement(2902802..2902957)	Alkaliphilus metalliredigens QYMF	5312963
YP_001320699.1	CDS	Amet_2890	NC_009633.1	2903098	2903835	R	transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase	complement(2903098..2903835)	Alkaliphilus metalliredigens QYMF	5312964
YP_001320700.1	CDS	Amet_2891	NC_009633.1	2903934	2905223	R	PFAM: peptidase M16 domain protein; KEGG: tte:TTE1655 predicted Zn-dependent peptidase; peptidase M16 domain-containing protein	complement(2903934..2905223)	Alkaliphilus metalliredigens QYMF	5312965
YP_001320701.1	CDS	Amet_2892	NC_009633.1	2905242	2906504	R	PFAM: peptidase M16 domain protein; KEGG: tte:TTE1656 predicted Zn-dependent peptidase; peptidase M16 domain-containing protein	complement(2905242..2906504)	Alkaliphilus metalliredigens QYMF	5312966
YP_001320702.1	CDS	Amet_2893	NC_009633.1	2906625	2907797	R	hypothetical protein	complement(2906625..2907797)	Alkaliphilus metalliredigens QYMF	5312967
YP_001320703.1	CDS	Amet_2894	NC_009633.1	2908001	2908594	R	TIGRFAM: Sporulation lipoprotein YhcN/YlaJ; KEGG: ctc:CTC01534 hypothetical protein; sporulation lipoprotein YhcN/YlaJ	complement(2908001..2908594)	Alkaliphilus metalliredigens QYMF	5312968
YP_001320704.1	CDS	Amet_2895	NC_009633.1	2908657	2908938	R	hypothetical protein	complement(2908657..2908938)	Alkaliphilus metalliredigens QYMF	5312969
YP_001320705.1	CDS	Amet_2896	NC_009633.1	2909140	2910234	D	TIGRFAM: GTP-binding protein YchF; PFAM: GTP-binding protein, HSR1-related; Protein of unknown function DUF933; KEGG: cth:Cthe_0877 GTP-binding protein YchF; GTP-binding protein YchF	2909140..2910234	Alkaliphilus metalliredigens QYMF	5312970
YP_001320706.1	CDS	Amet_2897	NC_009633.1	2910347	2911021	R	catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase	complement(2910347..2911021)	Alkaliphilus metalliredigens QYMF	5312971
YP_001320707.1	CDS	Amet_2898	NC_009633.1	2911038	2911616	R	PFAM: Propanediol utilization protein; KEGG: dsy:DSY2876 hypothetical protein; propanediol utilization protein	complement(2911038..2911616)	Alkaliphilus metalliredigens QYMF	5312972
YP_001320708.1	CDS	Amet_2899	NC_009633.1	2911726	2913534	R	PFAM: GAF domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: lbl:LBL_1463 serine phosphatase RsbU, regulator of sigma subunit; protein serine phosphatase with GAF(s) sensor(s)	complement(2911726..2913534)	Alkaliphilus metalliredigens QYMF	5312973
YP_001320709.1	CDS	Amet_2900	NC_009633.1	2913555	2914562	R	hypothetical protein	complement(2913555..2914562)	Alkaliphilus metalliredigens QYMF	5312974
YP_001320710.1	CDS	Amet_2901	NC_009633.1	2914683	2914946	R	hypothetical protein	complement(2914683..2914946)	Alkaliphilus metalliredigens QYMF	5312975
YP_001320711.1	CDS	Amet_2902	NC_009633.1	2915033	2915200	R	hypothetical protein	complement(2915033..2915200)	Alkaliphilus metalliredigens QYMF	5312976
YP_001320712.1	CDS	Amet_2903	NC_009633.1	2915279	2915818	R	TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: tte:TTE2394 hypoxanthine-guanine phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase	complement(2915279..2915818)	Alkaliphilus metalliredigens QYMF	5312977
YP_001320713.1	CDS	Amet_2904	NC_009633.1	2915918	2916448	R	TIGRFAM: ATP--cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: bat:BAS1388 ATP:cob(I)alamin adenosyltransferase, putative; ATP--cobalamin adenosyltransferase	complement(2915918..2916448)	Alkaliphilus metalliredigens QYMF	5312978
YP_001320714.1	CDS	Amet_2905	NC_009633.1	2916693	2917664	R	TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; KEGG: fnu:FN0400 dipeptide transport ATP-binding protein dppF; oligopeptide/dipeptide ABC transporter ATPase	complement(2916693..2917664)	Alkaliphilus metalliredigens QYMF	5312979
YP_001320715.1	CDS	Amet_2906	NC_009633.1	2917687	2918670	R	TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; KEGG: fnu:FN0399 dipeptide transport ATP-binding protein dppD; oligopeptide/dipeptide ABC transporter ATPase	complement(2917687..2918670)	Alkaliphilus metalliredigens QYMF	5312980
YP_001320716.1	CDS	Amet_2907	NC_009633.1	2918698	2919612	R	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: fnu:FN0398 dipeptide transport system permease protein dppC; binding-protein-dependent transport system inner membrane protein	complement(2918698..2919612)	Alkaliphilus metalliredigens QYMF	5312981
YP_001320717.1	CDS	Amet_2908	NC_009633.1	2919643	2920572	R	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: fnu:FN0397 dipeptide transport system permease protein dppB; nickel-transporting ATPase	complement(2919643..2920572)	Alkaliphilus metalliredigens QYMF	5312982
YP_001320718.1	CDS	Amet_2909	NC_009633.1	2920701	2922266	R	PFAM: extracellular solute-binding protein, family 5; KEGG: fnu:FN0396 dipeptide-binding protein; extracellular solute-binding protein	complement(2920701..2922266)	Alkaliphilus metalliredigens QYMF	5312983
YP_001320719.1	CDS	Amet_2910	NC_009633.1	2922822	2923055	R	hypothetical protein	complement(2922822..2923055)	Alkaliphilus metalliredigens QYMF	5312984
YP_001320720.1	CDS	Amet_2911	NC_009633.1	2923103	2924101	R	TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; KEGG: cpr:CPR_2254 oligopeptide ABC transporter, ATPase component; oligopeptide/dipeptide ABC transporter ATPase	complement(2923103..2924101)	Alkaliphilus metalliredigens QYMF	5312985
YP_001320721.1	CDS	Amet_2912	NC_009633.1	2924102	2925091	R	TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; KEGG: sth:STH2824 oligopeptide ABC transporter ATP-binding protein; oligopeptide/dipeptide ABC transporter ATPase	complement(2924102..2925091)	Alkaliphilus metalliredigens QYMF	5312986
YP_001320722.1	CDS	Amet_2913	NC_009633.1	2925108	2926019	R	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cpr:CPR_2256 oligopeptide ABC transporter, permease component; binding-protein-dependent transport system inner membrane protein	complement(2925108..2926019)	Alkaliphilus metalliredigens QYMF	5312987
YP_001320723.1	CDS	Amet_2914	NC_009633.1	2926033	2926998	R	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cpf:CPF_2554 oligopeptide/dipeptide ABC transporter, permease protein; binding-protein-dependent transport system inner membrane protein	complement(2926033..2926998)	Alkaliphilus metalliredigens QYMF	5312988
YP_001320724.1	CDS	Amet_2915	NC_009633.1	2927085	2928785	R	PFAM: extracellular solute-binding protein, family 5; KEGG: cpr:CPR_2258 bacterial extracellular solute-binding proteins, family 5 superfamily; extracellular solute-binding protein	complement(2927085..2928785)	Alkaliphilus metalliredigens QYMF	5312989
YP_001320725.1	CDS	Amet_2916	NC_009633.1	2929341	2929952	D	PFAM: NUDIX hydrolase; KEGG: ctc:CTC00982 phosphohydrolase (MutT family protein); NUDIX hydrolase	2929341..2929952	Alkaliphilus metalliredigens QYMF	5312990
YP_001320726.1	CDS	Amet_2917	NC_009633.1	2929978	2930496	R	hypothetical protein	complement(2929978..2930496)	Alkaliphilus metalliredigens QYMF	5312991
YP_001320727.1	CDS	Amet_2918	NC_009633.1	2930524	2931357	R	PFAM: cytochrome c assembly protein; KEGG: mta:Moth_2200 cytochrome c assembly protein; cytochrome c assembly protein	complement(2930524..2931357)	Alkaliphilus metalliredigens QYMF	5312992
YP_001320728.1	CDS	Amet_2919	NC_009633.1	2931368	2932648	R	KEGG: mta:Moth_2199 ResB-like; ResB protein required for cytochrome c biosynthesis-like protein	complement(2931368..2932648)	Alkaliphilus metalliredigens QYMF	5312993
YP_001320729.1	CDS	Amet_2920	NC_009633.1	2932850	2934127	R	PFAM: cytochrome c552; KEGG: dsy:DSY2472 cytochrome c nitrite reductase catalytic subunit NrfA; nitrite reductase	complement(2932850..2934127)	Alkaliphilus metalliredigens QYMF	5312994
YP_001320730.1	CDS	Amet_2921	NC_009633.1	2934345	2936057	D	PFAM: amine oxidase; KEGG: ter:Tery_1366 amine oxidase; amine oxidase	2934345..2936057	Alkaliphilus metalliredigens QYMF	5312995
YP_001320731.1	CDS	Amet_2922	NC_009633.1	2936224	2937111	R	PFAM: Acetamidase/Formamidase; KEGG: bha:BH0025 acetamidase; acetamidase/formamidase	complement(2936224..2937111)	Alkaliphilus metalliredigens QYMF	5312996
YP_001320732.1	CDS	Amet_2923	NC_009633.1	2937148	2938905	R	KEGG: dsy:DSY0955 hypothetical protein; hypothetical protein	complement(2937148..2938905)	Alkaliphilus metalliredigens QYMF	5312997
YP_001320733.1	CDS	Amet_2924	NC_009633.1	2939009	2939575	D	hypothetical protein	2939009..2939575	Alkaliphilus metalliredigens QYMF	5312998
YP_001320734.1	CDS	Amet_2925	NC_009633.1	2939724	2941748	R	TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; SMART: PAS domain containing protein; KEGG: cth:Cthe_0408 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase	complement(2939724..2941748)	Alkaliphilus metalliredigens QYMF	5312999
YP_001320735.1	CDS	Amet_2926	NC_009633.1	2942561	2944711	R	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase, HAMP region domain protein; KEGG: dsy:DSY1201 hypothetical protein; diguanylate cyclase/phosphodiesterase	complement(2942561..2944711)	Alkaliphilus metalliredigens QYMF	5313000
YP_001320736.1	CDS	Amet_2927	NC_009633.1	2945143	2945706	D	TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: dsy:DSY4418 hypothetical protein; ECF subfamily RNA polymerase sigma-24 factor	2945143..2945706	Alkaliphilus metalliredigens QYMF	5313001
YP_001320737.1	CDS	Amet_2928	NC_009633.1	2945709	2946164	D	KEGG: dsy:DSY4419 hypothetical protein; hypothetical protein	2945709..2946164	Alkaliphilus metalliredigens QYMF	5313002
YP_001320738.1	CDS	Amet_2929	NC_009633.1	2946161	2946862	D	KEGG: dsy:DSY4420 hypothetical protein; hypothetical protein	2946161..2946862	Alkaliphilus metalliredigens QYMF	5313003
YP_001320739.1	CDS	Amet_2930	NC_009633.1	2946852	2947229	D	KEGG: dsy:DSY4421 hypothetical protein; hypothetical protein	2946852..2947229	Alkaliphilus metalliredigens QYMF	5313004
YP_001320740.1	CDS	Amet_2931	NC_009633.1	2947329	2948093	R	PFAM: regulatory protein, MerR; TipAS antibiotic-recognition domain protein; Transcription regulator MerR, DNA binding; KEGG: dsy:DSY4240 hypothetical protein; MerR family transcriptional regulator	complement(2947329..2948093)	Alkaliphilus metalliredigens QYMF	5313005
YP_001320741.1	CDS	Amet_2932	NC_009633.1	2948249	2949835	R	KEGG: hypothetical membrane protein; K02040 phosphate   transport system substrate-binding protein; phosphate ABC transporter substrate-binding protein	complement(2948249..2949835)	Alkaliphilus metalliredigens QYMF	5313006
YP_001320742.1	CDS	Amet_2933	NC_009633.1	2949922	2950305	R	PFAM: NUDIX hydrolase; KEGG: chy:CHY_1339 mutator MutT protein; NUDIX hydrolase	complement(2949922..2950305)	Alkaliphilus metalliredigens QYMF	5313007
YP_001320743.1	CDS	Amet_2934	NC_009633.1	2950719	2952707	R	PFAM: histidine kinase, HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: dsy:DSY3380 hypothetical protein; methyl-accepting chemotaxis sensory transducer	complement(2950719..2952707)	Alkaliphilus metalliredigens QYMF	5313008
YP_001320744.1	CDS	Amet_2935	NC_009633.1	2953125	2954147	D	PFAM: peptidase S41; KEGG: cth:Cthe_0744 copper amine oxidase-like protein; peptidase S41	2953125..2954147	Alkaliphilus metalliredigens QYMF	5313009
YP_001320745.1	CDS	Amet_2936	NC_009633.1	2954431	2955084	R	KEGG: dsy:DSY3817 hypothetical protein; hypothetical protein	complement(2954431..2955084)	Alkaliphilus metalliredigens QYMF	5313010
YP_001320746.1	CDS	Amet_2937	NC_009633.1	2955318	2956358	R	PFAM: putative ammonia monooxygenase; KEGG: dsy:DSY3458 hypothetical protein; putative ammonia monooxygenase	complement(2955318..2956358)	Alkaliphilus metalliredigens QYMF	5313011
YP_001320747.1	CDS	Amet_2938	NC_009633.1	2956376	2957353	R	PFAM: beta-lactamase domain protein; KEGG: ctc:CTC00790 zinc metallohydrolase; beta-lactamase domain-containing protein	complement(2956376..2957353)	Alkaliphilus metalliredigens QYMF	5313012
YP_001320748.1	CDS	Amet_2939	NC_009633.1	2957799	2959010	D	hypothetical protein	2957799..2959010	Alkaliphilus metalliredigens QYMF	5313013
YP_001320749.1	CDS	Amet_2940	NC_009633.1	2959144	2959764	R	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: btl:BALH_1994 phosphoglycolate phosphatase; HAD family hydrolase	complement(2959144..2959764)	Alkaliphilus metalliredigens QYMF	5313014
YP_001320750.1	CDS	Amet_2941	NC_009633.1	2960037	2961203	R	TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: lmf:LMOf2365_0567 carboxypeptidase, putative; amidohydrolase	complement(2960037..2961203)	Alkaliphilus metalliredigens QYMF	5313015
YP_001320751.1	CDS	Amet_2942	NC_009633.1	2961316	2962506	R	KEGG: lwe:lwe0497 membrane protein; membrane protein	complement(2961316..2962506)	Alkaliphilus metalliredigens QYMF	5313016
YP_001320752.1	CDS	Amet_2943	NC_009633.1	2962881	2964872	R	PFAM: histidine kinase, HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: ctc:CTC01857 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer	complement(2962881..2964872)	Alkaliphilus metalliredigens QYMF	5313017
YP_001320753.1	CDS	Amet_2944	NC_009633.1	2965764	2967659	R	PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: dsy:DSY2035 hypothetical protein; alpha amylase	complement(2965764..2967659)	Alkaliphilus metalliredigens QYMF	5313018
YP_001320754.1	CDS	Amet_2945	NC_009633.1	2967700	2970183	R	TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase, family 35; KEGG: cno:NT01CX_1243 glycogen phosphorylase; glycogen/starch/alpha-glucan phosphorylase	complement(2967700..2970183)	Alkaliphilus metalliredigens QYMF	5313019
YP_001320755.1	CDS	Amet_2946	NC_009633.1	2970214	2971641	R	TIGRFAM: glycogen/starch synthase, ADP-glucose type; PFAM: glycosyl transferase, group 1; Starch synthase catalytic domain protein; KEGG: bar:GBAA5120 glycogen synthase; glycogen/starch synthase	complement(2970214..2971641)	Alkaliphilus metalliredigens QYMF	5313020
YP_001320756.1	CDS	Amet_2947	NC_009633.1	2971654	2972769	R	TIGRFAM: glucose-1-phosphate adenylyltransferase, GlgD subunit; PFAM: Nucleotidyl transferase; KEGG: cth:Cthe_3167 glucose-1-phosphate adenylyltransferase, GlgD subunit; glucose-1-phosphate adenylyltransferase	complement(2971654..2972769)	Alkaliphilus metalliredigens QYMF	5313021
YP_001320757.1	CDS	Amet_2948	NC_009633.1	2972807	2973922	R	TIGRFAM: glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; KEGG: cno:NT01CX_0723 glucose-1-phosphate adenylyltransferase; glucose-1-phosphate adenylyltransferase	complement(2972807..2973922)	Alkaliphilus metalliredigens QYMF	5313022
YP_001320758.1	CDS	Amet_2949	NC_009633.1	2973933	2975828	R	TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; alpha amylase, C-terminal all-beta; SMART: alpha amylase, catalytic sub domain; KEGG: cth:Cthe_2191 1,4-alpha-glucan branching enzyme; 1,4-alpha-glucan branching protein	complement(2973933..2975828)	Alkaliphilus metalliredigens QYMF	5313023
YP_001320759.1	CDS	Amet_2950	NC_009633.1	2976379	2976819	R	PFAM: GCN5-related N-acetyltransferase; KEGG: dsy:DSY2081 hypothetical protein; N-acetyltransferase GCN5	complement(2976379..2976819)	Alkaliphilus metalliredigens QYMF	5313024
YP_001320760.1	CDS	Amet_2951	NC_009633.1	2977359	2978753	R	KEGG: bth:BT_1831 hypothetical protein; hypothetical protein	complement(2977359..2978753)	Alkaliphilus metalliredigens QYMF	5313025
YP_001320761.1	CDS	Amet_2952	NC_009633.1	2978962	2980263	R	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: dsy:DSY3754 hypothetical protein; DEAD/DEAH box helicase	complement(2978962..2980263)	Alkaliphilus metalliredigens QYMF	5313026
YP_001320762.1	CDS	Amet_2953	NC_009633.1	2980856	2981830	R	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: ppd:Ppro_2951 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase	complement(2980856..2981830)	Alkaliphilus metalliredigens QYMF	5313027
YP_001320763.1	CDS	Amet_2954	NC_009633.1	2982040	2983059	R	PFAM: phosphoribosylglycinamide synthetase; protein of unknown function DUF201; D-alanine--D-alanine ligase domain protein; KEGG: mxa:MXAN_4097 D-alanine-D-alanine ligase family protein; D-alanine--D-alanine ligase	complement(2982040..2983059)	Alkaliphilus metalliredigens QYMF	5313028
YP_001320764.1	CDS	Amet_2955	NC_009633.1	2983125	2985035	R	KEGG: tte:TTE0924 methionine synthase I, cobalamin-binding domain; hypothetical protein	complement(2983125..2985035)	Alkaliphilus metalliredigens QYMF	5313029
YP_001320765.1	CDS	Amet_2956	NC_009633.1	2985035	2986117	R	PFAM: UDP-glucose/GDP-mannose dehydrogenase; NAD/NADP octopine/nopaline dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE, N-terminal domain protein; KEGG: tte:TTE0923 NAD/NADP octopine/nopaline dehydrogenas; NAD/NADP octopine/nopaline dehydrogenase	complement(2985035..2986117)	Alkaliphilus metalliredigens QYMF	5313030
YP_001320766.1	CDS	Amet_2957	NC_009633.1	2986206	2986928	R	PFAM: initiator RepB protein; KEGG: gka:GKP02 replication initiator protein; initiator RepB protein	complement(2986206..2986928)	Alkaliphilus metalliredigens QYMF	5313031
YP_001320767.1	CDS	Amet_2958	NC_009633.1	2987226	2988263	R	TIGRFAM: cytidyltransferase-related domain; citrate lyase ligase; PFAM: GCN5-related N-acetyltransferase; Citrate lyase ligase, C-terminal domain protein; KEGG: ctc:CTC02557 citrate (pro-3S)-lyase ligase; citrate lyase ligase	complement(2987226..2988263)	Alkaliphilus metalliredigens QYMF	5313032
YP_001320768.1	CDS	garR	NC_009633.1	2988486	2989373	R	catalyzes the reduction of tartronate semialdehyde to glycerate; tartronate semialdehyde reductase	complement(2988486..2989373)	Alkaliphilus metalliredigens QYMF	5313033
YP_001320769.1	CDS	Amet_2960	NC_009633.1	2989464	2991074	R	PFAM: chemotaxis sensory transducer; KEGG: dsy:DSY0999 hypothetical protein; methyl-accepting chemotaxis sensory transducer	complement(2989464..2991074)	Alkaliphilus metalliredigens QYMF	5313034
YP_001320770.1	CDS	Amet_2961	NC_009633.1	2991206	2992102	R	PFAM: Auxin Efflux Carrier; KEGG: bha:BH2670 hypothetical protein; auxin efflux carrier	complement(2991206..2992102)	Alkaliphilus metalliredigens QYMF	5313035
YP_001320771.1	CDS	Amet_2962	NC_009633.1	2992211	2992714	R	TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein; KEGG: mja:MJ1277 3-isopropylmalate dehydratase small subunit; 3-isopropylmalate dehydratase small subunit	complement(2992211..2992714)	Alkaliphilus metalliredigens QYMF	5313036
YP_001320772.1	CDS	Amet_2963	NC_009633.1	2992714	2993991	R	TIGRFAM: homoaconitate hydratase family protein; 3-isopropylmalate dehydratase; PFAM: aconitate hydratase domain protein; KEGG: mka:MK1440 3-isopropylmalate dehydratase large subunit; 3-isopropylmalate dehydratase	complement(2992714..2993991)	Alkaliphilus metalliredigens QYMF	5313037
YP_001320773.1	CDS	Amet_2964	NC_009633.1	2994120	2995436	R	PFAM: Citrate carrier protein; KEGG: tde:TDE2700 citrate carrier protein, CCS family; citrate carrier protein	complement(2994120..2995436)	Alkaliphilus metalliredigens QYMF	5313038
YP_001320774.1	CDS	Amet_2965	NC_009633.1	2995454	2996707	R	PFAM: malic protein domain protein; malic protein, NAD-binding; KEGG: cno:NT01CX_2051 NADP-dependent malic enzyme, putative; malate dehydrogenase	complement(2995454..2996707)	Alkaliphilus metalliredigens QYMF	5313039
YP_001320775.1	CDS	Amet_2966	NC_009633.1	2996758	2997447	R	PFAM: response regulator receiver; KEGG: oih:OB3219 truncated two-component response regulator; fused response regulator receiver/hypothetical protein	complement(2996758..2997447)	Alkaliphilus metalliredigens QYMF	5313040
YP_001320776.1	CDS	Amet_2967	NC_009633.1	2997444	2999048	R	PFAM: ATP-binding region, ATPase domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: bat:BAS0545 sensory box histidine kinase; signal transduction histidine kinase regulating citrate/malate metabolism	complement(2997444..2999048)	Alkaliphilus metalliredigens QYMF	5313041
YP_001320777.1	CDS	Amet_2968	NC_009633.1	2999378	3000118	D	PFAM: glutamine amidotransferase class-I; peptidase C26; KEGG: dsy:DSY4015 hypothetical protein; peptidase C26	2999378..3000118	Alkaliphilus metalliredigens QYMF	5313042
YP_001320778.1	CDS	Amet_2969	NC_009633.1	3000278	3001483	R	PFAM: EAL domain protein; Metal-dependent hydrolase HDOD; KEGG: dsy:DSY0462 hypothetical protein; diguanylate phosphodiesterase	complement(3000278..3001483)	Alkaliphilus metalliredigens QYMF	5313043
YP_001320779.1	CDS	Amet_2970	NC_009633.1	3001951	3002679	D	KEGG: ctc:CTC00958 hypothetical protein; hypothetical protein	3001951..3002679	Alkaliphilus metalliredigens QYMF	5313044
YP_001320780.1	CDS	Amet_2971	NC_009633.1	3002776	3002997	R	KEGG: cth:Cthe_1210 hypothetical protein; hypothetical protein	complement(3002776..3002997)	Alkaliphilus metalliredigens QYMF	5313045
YP_001320781.1	CDS	Amet_2973	NC_009633.1	3003735	3004766	R	TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; KEGG: fnu:FN0436 regulator of kinase autophosphorylation inhibitor; urea amidolyase-like protein	complement(3003735..3004766)	Alkaliphilus metalliredigens QYMF	5313047
YP_001320782.1	CDS	Amet_2974	NC_009633.1	3004759	3005508	R	PFAM: Allophanate hydrolase subunit 1; KEGG: tte:TTE1607 allophanate hydrolase subunit 1; allophanate hydrolase subunit 1	complement(3004759..3005508)	Alkaliphilus metalliredigens QYMF	5313048
YP_001320783.1	CDS	Amet_2975	NC_009633.1	3005582	3006364	R	PFAM: protein of unknown function DUF1445; KEGG: sfu:Sfum_3393 protein of unknown function DUF1445; hypothetical protein	complement(3005582..3006364)	Alkaliphilus metalliredigens QYMF	5313049
YP_001320784.1	CDS	Amet_2976	NC_009633.1	3006464	3007666	R	KEGG: fnu:FN0438 branched chain amino acid transport system II carrier protein; branched chain amino acid transport system II carrier protein	complement(3006464..3007666)	Alkaliphilus metalliredigens QYMF	5313050
YP_001320785.1	CDS	Amet_2977	NC_009633.1	3007695	3008465	R	PFAM: LamB/YcsF family protein; KEGG: cjj:CJJ81176_1526 LamB/YcsF family protein; LamB/YcsF family protein	complement(3007695..3008465)	Alkaliphilus metalliredigens QYMF	5313051
YP_001320786.1	CDS	Amet_2978	NC_009633.1	3008696	3010084	R	PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: gme:Gmet_0555 two component, sigma54 specific, transcriptional regulator, fis family; two component sigma54 specific Fis family transcriptional regulator	complement(3008696..3010084)	Alkaliphilus metalliredigens QYMF	5313052
YP_001320787.1	CDS	Amet_2979	NC_009633.1	3010158	3011936	R	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: atoS, atoC; sensor protein AtoS for response regulator AtoC; multi-sensor signal transduction histidine kinase	complement(3010158..3011936)	Alkaliphilus metalliredigens QYMF	5313053
YP_001320788.1	CDS	Amet_2980	NC_009633.1	3011950	3013446	R	PFAM: Na+/solute symporter; KEGG: pde:Pden_4529 Na+/solute symporter; Na+/solute symporter	complement(3011950..3013446)	Alkaliphilus metalliredigens QYMF	5313054
YP_001320789.1	CDS	Amet_2981	NC_009633.1	3013439	3013576	R	hypothetical protein	complement(3013439..3013576)	Alkaliphilus metalliredigens QYMF	5313055
YP_001320790.1	CDS	Amet_2982	NC_009633.1	3013896	3015281	R	KEGG: lsa:LSA0870 hypothetical protein; hypothetical protein	complement(3013896..3015281)	Alkaliphilus metalliredigens QYMF	5313056
YP_001320791.1	CDS	Amet_2984	NC_009633.1	3015509	3017329	R	KEGG: sde:Sde_3690 hypothetical protein; hypothetical protein	complement(3015509..3017329)	Alkaliphilus metalliredigens QYMF	5313058
YP_001320792.1	CDS	Amet_2989	NC_009633.1	3019206	3019613	R	PFAM: ribonuclease H; KEGG: aba:Acid345_0088 ribonuclease H; ribonuclease H	complement(3019206..3019613)	Alkaliphilus metalliredigens QYMF	5313064
YP_001320793.1	CDS	Amet_2990	NC_009633.1	3019650	3020768	R	PFAM: protein of unknown function DUF34; KEGG: bat:BAS4191 conserved hypothetical protein TIGR00486; hypothetical protein	complement(3019650..3020768)	Alkaliphilus metalliredigens QYMF	5313065
YP_001320794.1	CDS	Amet_2991	NC_009633.1	3020753	3021454	R	PFAM: protein of unknown function DUF633; KEGG: tte:TTE1754 predicted SAM-dependent methyltransferase; hypothetical protein	complement(3020753..3021454)	Alkaliphilus metalliredigens QYMF	5313066
YP_001320795.1	CDS	Amet_2992	NC_009633.1	3021619	3021822	D	hypothetical protein	3021619..3021822	Alkaliphilus metalliredigens QYMF	5313067
YP_001320796.1	CDS	Amet_2993	NC_009633.1	3021900	3023018	R	TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma-70; PFAM: sigma-70 1.1 domain protein; sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; KEGG: cth:Cthe_0895 RNA polymerase, sigma 38 subunit, RpoS; RpoD family RNA polymerase sigma factor	complement(3021900..3023018)	Alkaliphilus metalliredigens QYMF	5313068
YP_001320797.1	CDS	dnaG	NC_009633.1	3023037	3024872	R	synthesizes RNA primers at the replication forks; DNA primase	complement(3023037..3024872)	Alkaliphilus metalliredigens QYMF	5313069
YP_001320798.1	CDS	Amet_2995	NC_009633.1	3024940	3025407	R	PFAM: protein of unknown function DUF188; KEGG: cpf:CPF_2548 YaiI/YqxD family protein; hypothetical protein	complement(3024940..3025407)	Alkaliphilus metalliredigens QYMF	5313070
YP_001320799.1	CDS	Amet_2996	NC_009633.1	3025491	3026501	R	dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein	complement(3025491..3026501)	Alkaliphilus metalliredigens QYMF	5313071
YP_001320800.1	CDS	Amet_2997	NC_009633.1	3026938	3027270	R	PFAM: branched-chain amino acid transport; KEGG: dsy:DSY2397 hypothetical protein; branched-chain amino acid transport	complement(3026938..3027270)	Alkaliphilus metalliredigens QYMF	5313072
YP_001320801.1	CDS	Amet_2998	NC_009633.1	3027260	3027961	R	PFAM: AzlC family protein; KEGG: fnu:FN1039 branched-chain amino acid transport protein AzlC; AzlC family protein	complement(3027260..3027961)	Alkaliphilus metalliredigens QYMF	5313073
YP_001320802.1	CDS	Amet_2999	NC_009633.1	3028068	3029456	R	PFAM: regulatory protein GntR, HTH; aminotransferase, class I and II; KEGG: bsu:BG12133 similar to transcriptional regulator (GntR family) / aminotransferase (MocR-like); GntR family transcriptional regulator	complement(3028068..3029456)	Alkaliphilus metalliredigens QYMF	5313074
YP_001320803.1	CDS	Amet_3000	NC_009633.1	3029707	3031770	R	PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; FMN-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: lpl:lp_1425 fumarate reductase, flavoprotein subunit precursor; succinate dehydrogenase	complement(3029707..3031770)	Alkaliphilus metalliredigens QYMF	5313075
YP_001320804.1	CDS	Amet_3001	NC_009633.1	3032292	3032987	R	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: tte:TTE2689 response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain; two component transcriptional regulator	complement(3032292..3032987)	Alkaliphilus metalliredigens QYMF	5313076
YP_001320805.1	CDS	Amet_3002	NC_009633.1	3033303	3035090	D	PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; KEGG: bce:BC4588 phosphate regulon sensor protein PhoR; integral membrane sensor signal transduction histidine kinase	3033303..3035090	Alkaliphilus metalliredigens QYMF	5313077
YP_001320806.1	CDS	tnaA	NC_009633.1	3035497	3036876	R	tryptophan indole-lyase; catalyzes the formation of indole and pyruvate from tryptophan; tryptophanase	complement(3035497..3036876)	Alkaliphilus metalliredigens QYMF	5313078
YP_001320807.1	CDS	Amet_3004	NC_009633.1	3037078	3038397	D	KEGG: gka:GK3253 hypothetical protein; hypothetical protein	3037078..3038397	Alkaliphilus metalliredigens QYMF	5313079
YP_001320808.1	CDS	Amet_3008	NC_009633.1	3039166	3039771	R	PFAM: regulatory protein, TetR; KEGG: cno:NT01CX_0025 transcription regulator (TetR/AcrR family); TetR family transcriptional regulator	complement(3039166..3039771)	Alkaliphilus metalliredigens QYMF	5313083
YP_001320809.1	CDS	Amet_3009	NC_009633.1	3040013	3041863	D	PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; FMN-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: lpl:lp_3491 fumarate reductase, flavoprotein subunit precursor; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein	3040013..3041863	Alkaliphilus metalliredigens QYMF	5313084
YP_001320810.1	CDS	Amet_3010	NC_009633.1	3043113	3044477	D	PFAM: transposase, IS4 family protein; KEGG: wol:WD0563 transposase, IS4 family; transposase, IS4 family protein	3043113..3044477	Alkaliphilus metalliredigens QYMF	5313085
YP_001320811.1	CDS	Amet_3012	NC_009633.1	3045104	3045784	R	KEGG: cpf:CPF_2623 hypothetical protein; hypothetical protein	complement(3045104..3045784)	Alkaliphilus metalliredigens QYMF	5313087
YP_001320812.1	CDS	Amet_3013	NC_009633.1	3045954	3046553	R	primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4	complement(3045954..3046553)	Alkaliphilus metalliredigens QYMF	5313088
YP_001320813.1	CDS	Amet_3014	NC_009633.1	3046681	3047109	R	TIGRFAM: flavodoxin; PFAM: flavodoxin/nitric oxide synthase; KEGG: mac:MA2699 flavodoxin; flavodoxin	complement(3046681..3047109)	Alkaliphilus metalliredigens QYMF	5313089
YP_001320814.1	CDS	Amet_3015	NC_009633.1	3047614	3047886	R	PFAM: protein of unknown function DUF156; KEGG: dsy:DSY0389 hypothetical protein; hypothetical protein	complement(3047614..3047886)	Alkaliphilus metalliredigens QYMF	5313090
YP_001320815.1	CDS	Amet_3016	NC_009633.1	3047911	3049218	R	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: dge:Dgeo_2542 MATE efflux family protein; MATE efflux family protein	complement(3047911..3049218)	Alkaliphilus metalliredigens QYMF	5313091
YP_001320816.1	CDS	Amet_3017	NC_009633.1	3049607	3050290	R	hypothetical protein	complement(3049607..3050290)	Alkaliphilus metalliredigens QYMF	5313092
YP_001320817.1	CDS	Amet_3018	NC_009633.1	3050295	3050618	R	PFAM: transcriptional regulator PadR family protein; KEGG: ctc:CTC00601 putative transcriptional regulator (PadR family); PadR-like family transcriptional regulator	complement(3050295..3050618)	Alkaliphilus metalliredigens QYMF	5313093
YP_001320818.1	CDS	Amet_3019	NC_009633.1	3051095	3053731	R	catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate phosphate dikinase	complement(3051095..3053731)	Alkaliphilus metalliredigens QYMF	5313094
YP_001320819.1	CDS	Amet_3020	NC_009633.1	3053753	3054586	R	PFAM: protein of unknown function DUF299; KEGG: bcl:ABC1687 hypothetical protein; hypothetical protein	complement(3053753..3054586)	Alkaliphilus metalliredigens QYMF	5313095
YP_001320820.1	CDS	Amet_3021	NC_009633.1	3054597	3055235	R	PFAM: CBS domain containing protein; Helix-turn-helix, type 11 domain protein; KEGG: ctc:CTC02015 conserved protein with cbs domain; hypothetical protein	complement(3054597..3055235)	Alkaliphilus metalliredigens QYMF	5313096
YP_001320821.1	CDS	Amet_3022	NC_009633.1	3055413	3056801	R	Catalyzes a two-step reaction, first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase	complement(3055413..3056801)	Alkaliphilus metalliredigens QYMF	5313097
YP_001320822.1	CDS	Amet_3023	NC_009633.1	3057213	3057746	R	PFAM: ubiquitin-associated- domain-containing protein; KEGG: tte:TTE0977 hypothetical protein; ubiquitin-associated domain-containing protein	complement(3057213..3057746)	Alkaliphilus metalliredigens QYMF	5313098
YP_001320823.1	CDS	Amet_3024	NC_009633.1	3057767	3058507	R	TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O, RecO; KEGG: cth:Cthe_1066 DNA repair protein RecO; DNA repair protein RecO	complement(3057767..3058507)	Alkaliphilus metalliredigens QYMF	5313099
YP_001320824.1	CDS	Amet_3025	NC_009633.1	3058564	3058731	R	hypothetical protein	complement(3058564..3058731)	Alkaliphilus metalliredigens QYMF	5313100
YP_001320825.1	CDS	era	NC_009633.1	3058836	3059723	R	Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era	complement(3058836..3059723)	Alkaliphilus metalliredigens QYMF	5313101
YP_001320826.1	CDS	Amet_3027	NC_009633.1	3059735	3060136	R	TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: cpr:CPR_1988 cytidine deaminase; cytidine deaminase	complement(3059735..3060136)	Alkaliphilus metalliredigens QYMF	5313102
YP_001320827.1	CDS	Amet_3028	NC_009633.1	3060168	3061217	R	KEGG: cth:Cthe_0155 hypothetical protein; hypothetical protein	complement(3060168..3061217)	Alkaliphilus metalliredigens QYMF	5313103
YP_001320828.1	CDS	Amet_3029	NC_009633.1	3061214	3061831	R	PFAM: protein of unknown function DUF502; KEGG: pca:Pcar_1826 hypothetical protein; hypothetical protein	complement(3061214..3061831)	Alkaliphilus metalliredigens QYMF	5313104
YP_001320829.1	CDS	Amet_3030	NC_009633.1	3061940	3062638	R	PFAM: phosphoesterase, PA-phosphatase related; diacylglycerol kinase; KEGG: tte:TTE0973 Diacylglycerol kinase; diacylglycerol kinase	complement(3061940..3062638)	Alkaliphilus metalliredigens QYMF	5313105
YP_001320830.1	CDS	Amet_3031	NC_009633.1	3062654	3063121	R	PFAM: protein of unknown function UPF0054; KEGG: chy:CHY_0427 conserved hypothetical protein TIGR00043; hypothetical protein	complement(3062654..3063121)	Alkaliphilus metalliredigens QYMF	5313106
YP_001320831.1	CDS	Amet_3032	NC_009633.1	3063099	3065309	R	TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; metal-dependent phosphohydrolase, 7TM intracellular region; metal-dependent phosphohydrolase, 7TM extracellular region; SMART: metal-dependent phosphohydrolase, HD region; KEGG: tte:TTE0971 predicted membrane-associated HD superfamily hydrolase; metal dependent phosphohydrolase	complement(3063099..3065309)	Alkaliphilus metalliredigens QYMF	5313107
YP_001320832.1	CDS	Amet_3033	NC_009633.1	3065347	3066363	R	PFAM: PhoH family protein; KEGG: tte:TTE0970 Phosphate starvation-inducible protein PhoH, predicted ATPase; PhoH family protein	complement(3065347..3066363)	Alkaliphilus metalliredigens QYMF	5313108
YP_001320833.1	CDS	Amet_3034	NC_009633.1	3066367	3067599	R	PFAM: putative stage IV sporulation YqfD; KEGG: tte:TTE0969 stage IV sporulation protein; putative stage IV sporulation YqfD	complement(3066367..3067599)	Alkaliphilus metalliredigens QYMF	5313109
YP_001320834.1	CDS	Amet_3035	NC_009633.1	3067612	3067887	R	PFAM: protein of unknown function DUF1429; KEGG: cth:Cthe_1073 protein of unknown function DUF1429; hypothetical protein	complement(3067612..3067887)	Alkaliphilus metalliredigens QYMF	5313110
YP_001320835.1	CDS	Amet_3036	NC_009633.1	3067999	3068520	R	hypothetical protein	complement(3067999..3068520)	Alkaliphilus metalliredigens QYMF	5313111
YP_001320836.1	CDS	Amet_3037	NC_009633.1	3068588	3069577	R	PFAM: protein of unknown function DUF1432; KEGG: cth:Cthe_0858 protein of unknown function DUF1432; hypothetical protein	complement(3068588..3069577)	Alkaliphilus metalliredigens QYMF	5313112
YP_001320837.1	CDS	Amet_3038	NC_009633.1	3069590	3070888	R	PFAM: protein of unknown function DUF107; KEGG: bld:BLi02730 YqeZ; hypothetical protein	complement(3069590..3070888)	Alkaliphilus metalliredigens QYMF	5313113
YP_001320838.1	CDS	Amet_3039	NC_009633.1	3071170	3072309	R	PFAM: Endonuclease/exonuclease/phosphatase; KEGG: oih:OB1305 hypothetical protein; endonuclease/exonuclease/phosphatase	complement(3071170..3072309)	Alkaliphilus metalliredigens QYMF	5313114
YP_001320839.1	CDS	Amet_3040	NC_009633.1	3072534	3074408	R	PFAM: transposase, IS4 family protein; KEGG: tte:TTE2604 transposase; transposase, IS4 family protein	complement(3072534..3074408)	Alkaliphilus metalliredigens QYMF	5313115
YP_001320840.1	CDS	Amet_3041	NC_009633.1	3074665	3075111	R	PFAM: GatB/Yqey domain protein; KEGG: cth:Cthe_1347 GatB/YqeY; GatB/Yqey domain-containing protein	complement(3074665..3075111)	Alkaliphilus metalliredigens QYMF	5313116
YP_001320841.1	CDS	rpsU	NC_009633.1	3075158	3075331	R	a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21	complement(3075158..3075331)	Alkaliphilus metalliredigens QYMF	5313117
YP_001320842.1	CDS	Amet_3043	NC_009633.1	3075464	3075808	R	PFAM: histidine triad (HIT) protein; KEGG: tte:TTE0963 diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase; histidine triad (HIT) protein	complement(3075464..3075808)	Alkaliphilus metalliredigens QYMF	5313118
YP_001320843.1	CDS	Amet_3044	NC_009633.1	3075915	3077216	R	KEGG: cth:Cthe_0150 RNA modification enzyme, MiaB family; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: Radical SAM domain protein; Protein of unknown function UPF0004-like; SMART: Elongator protein 3/MiaB/NifB; RNA modification protein	complement(3075915..3077216)	Alkaliphilus metalliredigens QYMF	5313119
YP_001320844.1	CDS	Amet_3045	NC_009633.1	3077217	3077981	R	in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE	complement(3077217..3077981)	Alkaliphilus metalliredigens QYMF	5313120
YP_001320845.1	CDS	prmA	NC_009633.1	3077974	3078927	R	methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; 50S ribosomal protein L11 methyltransferase	complement(3077974..3078927)	Alkaliphilus metalliredigens QYMF	5313121
YP_001320846.1	CDS	Amet_3047	NC_009633.1	3079137	3080273	R	TIGRFAM: chaperone protein DnaJ; PFAM: DnaJ central domain protein; heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: cth:Cthe_1321 chaperone protein DnaJ; chaperone protein DnaJ	complement(3079137..3080273)	Alkaliphilus metalliredigens QYMF	5313122
YP_001320847.1	CDS	dnaK	NC_009633.1	3080349	3082193	R	heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK	complement(3080349..3082193)	Alkaliphilus metalliredigens QYMF	5313123
YP_001320848.1	CDS	Amet_3049	NC_009633.1	3082244	3082852	R	PFAM: GrpE protein; KEGG: tte:TTE0954 Molecular chaperone GrpE (heat shock protein); GrpE protein HSP-70 cofactor	complement(3082244..3082852)	Alkaliphilus metalliredigens QYMF	5313124
YP_001320849.1	CDS	Amet_3050	NC_009633.1	3082999	3084030	R	TIGRFAM: heat-inducible transcription repressor HrcA; PFAM: Negative regulator of class I heat shock protein; KEGG: cpf:CPF_2292 heat-inducible transcription repressor HrcA; heat-inducible transcription repressor HrcA	complement(3082999..3084030)	Alkaliphilus metalliredigens QYMF	5313125
YP_001320850.1	CDS	Amet_3051	NC_009633.1	3084200	3085339	R	KEGG: cth:Cthe_1325 putative oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; putative oxygen-independent coproporphyrinogen III oxidase	complement(3084200..3085339)	Alkaliphilus metalliredigens QYMF	5313126
YP_001320851.1	CDS	Amet_3052	NC_009633.1	3085467	3087275	R	binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA	complement(3085467..3087275)	Alkaliphilus metalliredigens QYMF	5313127
YP_001320852.1	CDS	Amet_3053	NC_009633.1	3087401	3087712	R	hypothetical protein	complement(3087401..3087712)	Alkaliphilus metalliredigens QYMF	5313128
YP_001320853.1	CDS	Amet_3054	NC_009633.1	3087765	3089018	R	PFAM: Stage II sporulation P family protein; KEGG: tte:TTE0947 stage II sporulation protein P; stage II sporulation P family protein	complement(3087765..3089018)	Alkaliphilus metalliredigens QYMF	5313129
YP_001320854.1	CDS	Amet_3055	NC_009633.1	3089143	3090117	R	Initiates the rapid degradation of small, acid-soluble proteins during spore germination; germination protease	complement(3089143..3090117)	Alkaliphilus metalliredigens QYMF	5313130
YP_001320855.1	CDS	rpsT	NC_009633.1	3090325	3090588	D	binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20	3090325..3090588	Alkaliphilus metalliredigens QYMF	5313131
YP_001320856.1	CDS	Amet_3057	NC_009633.1	3090686	3091726	R	TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta; KEGG: cth:Cthe_1040 DNA polymerase III, delta subunit; DNA polymerase III subunit delta	complement(3090686..3091726)	Alkaliphilus metalliredigens QYMF	5313132
YP_001320857.1	CDS	Amet_3058	NC_009633.1	3091723	3093189	R	PFAM: ComEC/Rec2-related protein; KEGG: tte:TTE0941 predicted hydrolases of metallo-beta-lactamase fold; ComEC/Rec2-like protein	complement(3091723..3093189)	Alkaliphilus metalliredigens QYMF	5313133
YP_001320858.1	CDS	Amet_3059	NC_009633.1	3093300	3093608	R	hypothetical protein	complement(3093300..3093608)	Alkaliphilus metalliredigens QYMF	5313134
YP_001320859.1	CDS	Amet_3060	NC_009633.1	3093700	3094437	R	PFAM: beta-lactamase domain protein; KEGG: cth:Cthe_3155 beta-lactamase-like protein; beta-lactamase domain-containing protein	complement(3093700..3094437)	Alkaliphilus metalliredigens QYMF	5313135
YP_001320860.1	CDS	Amet_3061	NC_009633.1	3094475	3095740	R	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: cph:Cpha266_1841 TPR repeat-containing protein; hypothetical protein	complement(3094475..3095740)	Alkaliphilus metalliredigens QYMF	5313136
YP_001320861.1	CDS	Amet_3062	NC_009633.1	3095973	3096854	D	PFAM: beta-lactamase domain protein; KEGG: tte:TTE2430 predicted hydrolase of metallo-beta-lactamase fold; beta-lactamase domain-containing protein	3095973..3096854	Alkaliphilus metalliredigens QYMF	5313137
YP_001320862.1	CDS	Amet_3063	NC_009633.1	3096836	3097516	R	hypothetical protein	complement(3096836..3097516)	Alkaliphilus metalliredigens QYMF	5313138
YP_001320863.1	CDS	Amet_3064	NC_009633.1	3097513	3099759	R	KEGG: ctc:CTC02250 modification methylase bstVI; hypothetical protein	complement(3097513..3099759)	Alkaliphilus metalliredigens QYMF	5313139
YP_001320864.1	CDS	Amet_3065	NC_009633.1	3100050	3100730	D	KEGG: bha:BH2880 hypothetical protein; hypothetical protein	3100050..3100730	Alkaliphilus metalliredigens QYMF	5313140
YP_001320865.1	CDS	Amet_3066	NC_009633.1	3100757	3101695	R	hypothetical protein	complement(3100757..3101695)	Alkaliphilus metalliredigens QYMF	5313141
YP_001320866.1	CDS	Amet_3067	NC_009633.1	3101950	3102417	D	hypothetical protein	3101950..3102417	Alkaliphilus metalliredigens QYMF	5313142
YP_001320867.1	CDS	Amet_3068	NC_009633.1	3102511	3103518	D	KEGG: mta:Moth_2291 hypothetical protein; hypothetical protein	3102511..3103518	Alkaliphilus metalliredigens QYMF	5313143
YP_001320868.1	CDS	Amet_3069	NC_009633.1	3103575	3104360	R	PFAM: ABC-2 type transporter; KEGG: hso:HS_0849 ABC-type multidrug transport system, permease component; ABC transporter	complement(3103575..3104360)	Alkaliphilus metalliredigens QYMF	5313144
YP_001320869.1	CDS	Amet_3070	NC_009633.1	3104370	3105275	R	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_0755 ABC transporter related; ABC transporter-like protein	complement(3104370..3105275)	Alkaliphilus metalliredigens QYMF	5313145
YP_001320870.1	CDS	Amet_3071	NC_009633.1	3105402	3107048	R	PFAM: Amidohydrolase 3; KEGG: sth:STH1237 hypothetical protein; amidohydrolase 3	complement(3105402..3107048)	Alkaliphilus metalliredigens QYMF	5313146
YP_001320871.1	CDS	Amet_3072	NC_009633.1	3107174	3107701	D	PFAM: phosphatidylglycerophosphatase A; KEGG: tte:TTE0928 phosphatidylglycerophosphatase A; phosphatidylglycerophosphatase A	3107174..3107701	Alkaliphilus metalliredigens QYMF	5313147
YP_001320872.1	CDS	Amet_3073	NC_009633.1	3107817	3109406	R	PFAM: helicase domain protein; DbpA, RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: cno:NT01CX_0997 ATP-dependent RNA helicase; DEAD/DEAH box helicase	complement(3107817..3109406)	Alkaliphilus metalliredigens QYMF	5313148
YP_001320873.1	CDS	Amet_3074	NC_009633.1	3109631	3110740	R	PFAM: spore germination B3 GerAC family protein; KEGG: ctc:CTC02447 spore germination protein B3/KC; spore germination B3 GerAC family protein	complement(3109631..3110740)	Alkaliphilus metalliredigens QYMF	5313149
YP_001320874.1	CDS	Amet_3075	NC_009633.1	3110737	3112086	R	PFAM: GerA spore germination protein; KEGG: ctc:CTC02448 spore germination protein KA; GerA spore germination protein	complement(3110737..3112086)	Alkaliphilus metalliredigens QYMF	5313150
YP_001320875.1	CDS	Amet_3076	NC_009633.1	3112279	3113361	D	TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: ctc:CTC02449 spore germination protein B2/KB; spore germination protein	3112279..3113361	Alkaliphilus metalliredigens QYMF	5313151
YP_001320876.1	CDS	Amet_3077	NC_009633.1	3113479	3114441	R	PFAM: peptidase M19, renal dipeptidase; KEGG: tko:TK2040 microsomal dipeptidase homolog; membrane dipeptidase	complement(3113479..3114441)	Alkaliphilus metalliredigens QYMF	5313152
YP_001320877.1	CDS	Amet_3078	NC_009633.1	3114756	3117281	D	PFAM: protein of unknown function DUF214; KEGG: cac:CAC3561 ABC-type transporter, permease component; hypothetical protein	3114756..3117281	Alkaliphilus metalliredigens QYMF	5313153
YP_001320878.1	CDS	Amet_3079	NC_009633.1	3117295	3117969	D	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cac:CAC3560 ABC-type transporter, ATPase component; ABC transporter-like protein	3117295..3117969	Alkaliphilus metalliredigens QYMF	5313154
YP_001320879.1	CDS	Amet_3080	NC_009633.1	3117960	3119039	D	PFAM: secretion protein HlyD family protein; KEGG: cac:CAC0141 membrane permease, predicted cation efflux pumps; secretion protein HlyD family protein	3117960..3119039	Alkaliphilus metalliredigens QYMF	5313155
YP_001320880.1	CDS	Amet_3081	NC_009633.1	3119143	3119874	R	PFAM: amino acid-binding ACT domain protein; MgtC/SapB transporter; KEGG: cth:Cthe_1919 MgtC/SapB transporter; MgtC/SapB transporter	complement(3119143..3119874)	Alkaliphilus metalliredigens QYMF	5313156
YP_001320881.1	CDS	Amet_3082	NC_009633.1	3120012	3121520	R	PFAM: protein of unknown function DUF112, transmembrane; KEGG: fnu:FN2105 integral membrane protein; hypothetical protein	complement(3120012..3121520)	Alkaliphilus metalliredigens QYMF	5313157
YP_001320882.1	CDS	Amet_3083	NC_009633.1	3121541	3121969	R	KEGG: fnu:FN2104 hypothetical protein; hypothetical protein	complement(3121541..3121969)	Alkaliphilus metalliredigens QYMF	5313158
YP_001320883.1	CDS	Amet_3084	NC_009633.1	3122078	3123046	R	PFAM: Uncharacterized protein UPF0065; KEGG: fnu:FN2103 RecA protein; hypothetical protein	complement(3122078..3123046)	Alkaliphilus metalliredigens QYMF	5313159
YP_001320884.1	CDS	Amet_3085	NC_009633.1	3123158	3124144	R	PFAM: Uncharacterized protein UPF0065; KEGG: fnu:FN2103 RecA protein; hypothetical protein	complement(3123158..3124144)	Alkaliphilus metalliredigens QYMF	5313160
YP_001320885.1	CDS	Amet_3086	NC_009633.1	3124407	3126167	R	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; PAS fold domain protein; KEGG: cth:Cthe_1393 multi-sensor signal transduction histidine kinase; multi-sensor signal transduction histidine kinase	complement(3124407..3126167)	Alkaliphilus metalliredigens QYMF	5313161
YP_001320886.1	CDS	Amet_3087	NC_009633.1	3126176	3126886	R	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: tte:TTE1633 response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain; two component transcriptional regulator	complement(3126176..3126886)	Alkaliphilus metalliredigens QYMF	5313162
YP_001320887.1	CDS	Amet_3088	NC_009633.1	3126926	3127177	R	hypothetical protein	complement(3126926..3127177)	Alkaliphilus metalliredigens QYMF	5313163
YP_001320888.1	CDS	Amet_3089	NC_009633.1	3127486	3128490	R	PFAM: Electron transfer flavoprotein, alpha/beta-subunit-like; Electron transfer flavoprotein, alpha subunit-like; KEGG: ctc:CTC02424 electron transfer flavoprotein alpha-subunit; electron transfer flavoprotein subunit alpha/beta-like protein	complement(3127486..3128490)	Alkaliphilus metalliredigens QYMF	5313164
YP_001320889.1	CDS	Amet_3090	NC_009633.1	3128519	3129304	R	PFAM: Electron transfer flavoprotein, alpha/beta-subunit-like; KEGG: cpr:CPR_2285 electron transfer flavoprotein beta-subunit; electron transfer flavoprotein subunit alpha/beta-like protein	complement(3128519..3129304)	Alkaliphilus metalliredigens QYMF	5313165
YP_001320890.1	CDS	Amet_3091	NC_009633.1	3129319	3130458	R	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: fnu:FN0783 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein	complement(3129319..3130458)	Alkaliphilus metalliredigens QYMF	5313166
YP_001320891.1	CDS	Amet_3092	NC_009633.1	3130514	3130927	R	PFAM: MaoC domain protein dehydratase; KEGG: tte:TTE0551 predicted acyl dehydratase; dehydratase	complement(3130514..3130927)	Alkaliphilus metalliredigens QYMF	5313167
YP_001320892.1	CDS	Amet_3093	NC_009633.1	3131134	3131295	R	hypothetical protein	complement(3131134..3131295)	Alkaliphilus metalliredigens QYMF	5313168
YP_001320893.1	CDS	Amet_3094	NC_009633.1	3131831	3132322	D	PFAM: NADH dehydrogenase (ubiquinone), 24 kDa subunit; KEGG: swo:Swol_0656 NADH:ubiquinone oxidoreductase 24 kD subunit-like protein; NADH dehydrogenase (ubiquinone), 24 kDa subunit	3131831..3132322	Alkaliphilus metalliredigens QYMF	5313169
YP_001320894.1	CDS	Amet_3095	NC_009633.1	3132326	3134074	D	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: swo:Swol_0657 NADH dehydrogenase (quinone); NADH dehydrogenase (quinone)	3132326..3134074	Alkaliphilus metalliredigens QYMF	5313170
YP_001320895.1	CDS	Amet_3096	NC_009633.1	3134102	3137665	D	PFAM: ferredoxin; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; KEGG: swo:Swol_0658 glutamate synthase beta chain-related oxidoreductase, containing 2Fe-2S and 4Fe-4S clusters; molybdopterin oxidoreductase	3134102..3137665	Alkaliphilus metalliredigens QYMF	5313171
YP_001320896.1	CDS	Amet_3097	NC_009633.1	3137730	3137861	R	hypothetical protein	complement(3137730..3137861)	Alkaliphilus metalliredigens QYMF	5313172
YP_001320897.1	CDS	Amet_3098	NC_009633.1	3138082	3138420	R	Contains selenocysteine; PFAM: glutaredoxin; KEGG: rxy:Rxyl_1609 glutaredoxin-like protein, YruB; glutaredoxin	complement(3138082..3138420)	Alkaliphilus metalliredigens QYMF	5313173
YP_001320898.1	CDS	Amet_3099	NC_009633.1	3138448	3138669	R	KEGG: cac:CAC0545 uncharacterized small protein, homolog of Treponema (6136517); hypothetical protein	complement(3138448..3138669)	Alkaliphilus metalliredigens QYMF	5313174
YP_001320899.1	CDS	Amet_3100	NC_009633.1	3138911	3139669	D	KEGG: bar:GBAA5476 hypothetical protein; hypothetical protein	3138911..3139669	Alkaliphilus metalliredigens QYMF	5313175
YP_001320900.1	CDS	Amet_3101	NC_009633.1	3139666	3140880	D	PFAM: glycosyl transferase, family 2; KEGG: bca:BCE_5356 glycosyl transferase domain protein, putative; glycosyl transferase family protein	3139666..3140880	Alkaliphilus metalliredigens QYMF	5313176
YP_001320901.1	CDS	Amet_3102	NC_009633.1	3140985	3141554	R	TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; KEGG: chy:CHY_1871 HDIG domain protein; metal dependent phosphohydrolase	complement(3140985..3141554)	Alkaliphilus metalliredigens QYMF	5313177
YP_001320902.1	CDS	Amet_3103	NC_009633.1	3141634	3142617	R	TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: dde:Dde_2947 HflC protein; HflC protein	complement(3141634..3142617)	Alkaliphilus metalliredigens QYMF	5313178
YP_001320903.1	CDS	Amet_3104	NC_009633.1	3142618	3143583	R	TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: lip:LI0675 membrane protease subunits, stomatin/prohibitin homologs; HflK protein	complement(3142618..3143583)	Alkaliphilus metalliredigens QYMF	5313179
YP_001320904.1	CDS	Amet_3105	NC_009633.1	3143689	3144771	R	KEGG: cth:Cthe_0434 ATPase; ATPase	complement(3143689..3144771)	Alkaliphilus metalliredigens QYMF	5313180
YP_001320905.1	CDS	Amet_3106	NC_009633.1	3144964	3147756	R	PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal repeat, beta-propeller; KEGG: cth:Cthe_0306 DNA gyrase/topoisomerase IV, subunit A; DNA topoisomerase	complement(3144964..3147756)	Alkaliphilus metalliredigens QYMF	5313181
YP_001320906.1	CDS	Amet_3107	NC_009633.1	3147775	3149817	R	PFAM: DNA gyrase, subunit B domain protein; DNA topoisomerase, type IIA, subunit B, region 2 domain protein; SMART: DNA topoisomerase II; KEGG: cth:Cthe_0305 DNA topoisomerase (ATP-hydrolyzing); DNA gyrase subunit B	complement(3147775..3149817)	Alkaliphilus metalliredigens QYMF	5313182
YP_001320907.1	CDS	Amet_3108	NC_009633.1	3150063	3150380	D	PFAM: Carboxymuconolactone decarboxylase; KEGG: rba:RB7019 hypothetical protein; carboxymuconolactone decarboxylase	3150063..3150380	Alkaliphilus metalliredigens QYMF	5313183
YP_001320908.1	CDS	Amet_3109	NC_009633.1	3150552	3150902	D	PFAM: Endoribonuclease L-PSP; KEGG: pha:PSHAa0974 with YjgF-like domain highly conserved in gamma-proteobacteria; endoribonuclease L-PSP	3150552..3150902	Alkaliphilus metalliredigens QYMF	5313184
YP_001320909.1	CDS	Amet_3111	NC_009633.1	3151182	3151607	R	PFAM: protein of unknown function DUF606; KEGG: cac:CAC3547 hypothetical protein; hypothetical protein	complement(3151182..3151607)	Alkaliphilus metalliredigens QYMF	5313186
YP_001320910.1	CDS	Amet_3112	NC_009633.1	3151784	3152275	D	PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: mth:MTH1484 hypothetical protein; pyridoxamine 5'-phosphate oxidase-like protein	3151784..3152275	Alkaliphilus metalliredigens QYMF	5313187
YP_001320911.1	CDS	Amet_3113	NC_009633.1	3152384	3153382	R	PFAM: Peptidoglycan-binding domain 1 protein; ErfK/YbiS/YcfS/YnhG family protein; KEGG: ctc:CTC01191 TonB-dependent receptor protein; ErfK/YbiS/YcfS/YnhG family protein	complement(3152384..3153382)	Alkaliphilus metalliredigens QYMF	5313188
YP_001320912.1	CDS	ileS	NC_009633.1	3153510	3156611	R	IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 2 subfamily; some organisms carry two different copies of this enzyme; in some organisms, the type 2 subfamily is associated with resistance to the antibiotic pseudomonic acid (mupirocin); isoleucyl-tRNA synthetase	complement(3153510..3156611)	Alkaliphilus metalliredigens QYMF	5313189
YP_001320913.1	CDS	Amet_3115	NC_009633.1	3157032	3158801	R	PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: ctc:CTC00427 glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase	complement(3157032..3158801)	Alkaliphilus metalliredigens QYMF	5313190
YP_001320914.1	CDS	Amet_3116	NC_009633.1	3159138	3160244	R	PFAM: glycine hydroxymethyltransferase; aminotransferase, class I and II; KEGG: pho:PH1654 serine hydroxymethyltransferase; glycine hydroxymethyltransferase	complement(3159138..3160244)	Alkaliphilus metalliredigens QYMF	5313191
YP_001320915.1	CDS	Amet_3117	NC_009633.1	3160411	3161703	R	PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: dvu:DVU1700 metallo-beta-lactamase family protein; beta-lactamase domain-containing protein	complement(3160411..3161703)	Alkaliphilus metalliredigens QYMF	5313192
YP_001320916.1	CDS	Amet_3118	NC_009633.1	3161700	3162581	R	PFAM: KWG Leptospira repeat protein; KEGG: chu:CHU_2188 hypothetical protein; hypothetical protein	complement(3161700..3162581)	Alkaliphilus metalliredigens QYMF	5313193
YP_001320917.1	CDS	Amet_3119	NC_009633.1	3162632	3163498	R	hypothetical protein	complement(3162632..3163498)	Alkaliphilus metalliredigens QYMF	5313194
YP_001320918.1	CDS	Amet_3120	NC_009633.1	3163697	3164398	R	KEGG: lic:LIC10622 motility protein A; hypothetical protein	complement(3163697..3164398)	Alkaliphilus metalliredigens QYMF	5313195
YP_001320919.1	CDS	Amet_3121	NC_009633.1	3164476	3164991	R	hypothetical protein	complement(3164476..3164991)	Alkaliphilus metalliredigens QYMF	5313196
YP_001320920.1	CDS	Amet_3122	NC_009633.1	3165479	3167104	R	PFAM: extracellular solute-binding protein, family 5; KEGG: cth:Cthe_0910 extracellular solute-binding protein, family 5; extracellular solute-binding protein	complement(3165479..3167104)	Alkaliphilus metalliredigens QYMF	5313198
YP_001320921.1	CDS	Amet_3123	NC_009633.1	3167266	3167835	R	PFAM: Lytic transglycosylase, catalytic; KEGG: cac:CAC1100 secreted protein, similar to catalytic domain of murein transglycosylase; lytic transglycosylase catalytic subunit	complement(3167266..3167835)	Alkaliphilus metalliredigens QYMF	5313199
YP_001320922.1	CDS	Amet_3124	NC_009633.1	3167857	3168459	R	TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; KEGG: tte:TTE0875 dephospho-CoA kinase; dephospho-CoA kinase	complement(3167857..3168459)	Alkaliphilus metalliredigens QYMF	5313200
YP_001320923.1	CDS	Amet_3125	NC_009633.1	3168468	3171161	R	has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I	complement(3168468..3171161)	Alkaliphilus metalliredigens QYMF	5313201
YP_001320924.1	CDS	Amet_3126	NC_009633.1	3171380	3172624	R	KEGG: hma:rrnAC0808 hypothetical protein; hypothetical protein	complement(3171380..3172624)	Alkaliphilus metalliredigens QYMF	5313202
YP_001320925.1	CDS	Amet_3127	NC_009633.1	3172614	3173219	R	TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: cth:Cthe_0890 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor	complement(3172614..3173219)	Alkaliphilus metalliredigens QYMF	5313203
YP_001320926.1	CDS	Amet_3128	NC_009633.1	3173350	3174315	R	PFAM: membrane-bound metal-dependent hydrolase; KEGG: dsy:DSY1801 hypothetical protein; membrane-bound metal-dependent hydrolase	complement(3173350..3174315)	Alkaliphilus metalliredigens QYMF	5313204
YP_001320927.1	CDS	Amet_3129	NC_009633.1	3174879	3176030	R	hypothetical protein	complement(3174879..3176030)	Alkaliphilus metalliredigens QYMF	5313206
YP_001320928.1	CDS	Amet_3130	NC_009633.1	3176240	3177811	D	PFAM: transposase, IS4 family protein; KEGG: mhu:Mhun_1523 transposase, IS4; transposase, IS4 family protein	3176240..3177811	Alkaliphilus metalliredigens QYMF	5313207
YP_001320929.1	CDS	Amet_3131	NC_009633.1	3177825	3178241	R	hypothetical protein	complement(3177825..3178241)	Alkaliphilus metalliredigens QYMF	5313208
YP_001320930.1	CDS	Amet_3132	NC_009633.1	3178670	3179119	R	hypothetical protein	complement(3178670..3179119)	Alkaliphilus metalliredigens QYMF	5313209
YP_001320931.1	CDS	Amet_3133	NC_009633.1	3179119	3179514	R	PFAM: helix-turn-helix domain protein; KEGG: swo:Swol_1542 hypothetical protein; helix-turn-helix domain-containing protein	complement(3179119..3179514)	Alkaliphilus metalliredigens QYMF	5313210
YP_001320932.1	CDS	Amet_3134	NC_009633.1	3179544	3179957	R	hypothetical protein	complement(3179544..3179957)	Alkaliphilus metalliredigens QYMF	5313211
YP_001320933.1	CDS	Amet_3135	NC_009633.1	3180685	3181002	R	hypothetical protein	complement(3180685..3181002)	Alkaliphilus metalliredigens QYMF	5313212
YP_001320934.1	CDS	Amet_3136	NC_009633.1	3181303	3181752	R	hypothetical protein	complement(3181303..3181752)	Alkaliphilus metalliredigens QYMF	5313213
YP_001320935.1	CDS	Amet_3137	NC_009633.1	3181861	3182751	D	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: ctc:CTC01013 cobalt-zinc-cadmium resistance protein CzcD; cation diffusion facilitator family transporter	3181861..3182751	Alkaliphilus metalliredigens QYMF	5313214
YP_001320936.1	CDS	Amet_3138	NC_009633.1	3182823	3183725	D	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: dsy:DSY4221 hypothetical protein; LysR family transcriptional regulator	3182823..3183725	Alkaliphilus metalliredigens QYMF	5313215
YP_001320937.1	CDS	Amet_3139	NC_009633.1	3183845	3184678	R	TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: chy:CHY_2418 DegV family protein; DegV family protein	complement(3183845..3184678)	Alkaliphilus metalliredigens QYMF	5313216
YP_001320938.1	CDS	Amet_3140	NC_009633.1	3184767	3186200	R	catalyzes the removal of amino acids from the N termini of peptides; putative aminopeptidase	complement(3184767..3186200)	Alkaliphilus metalliredigens QYMF	5313217
YP_001320939.1	CDS	Amet_3141	NC_009633.1	3186305	3186958	R	PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: cth:Cthe_1267 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator	complement(3186305..3186958)	Alkaliphilus metalliredigens QYMF	5313218
YP_001320940.1	CDS	Amet_3142	NC_009633.1	3186958	3188136	R	PFAM: ATP-binding region, ATPase domain protein; Sensor DegS domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: cth:Cthe_1268 histidine kinase; histidine kinase	complement(3186958..3188136)	Alkaliphilus metalliredigens QYMF	5313219
YP_001320941.1	CDS	Amet_3143	NC_009633.1	3188384	3188857	R	hypothetical protein	complement(3188384..3188857)	Alkaliphilus metalliredigens QYMF	5313220
YP_001320942.1	CDS	Amet_3144	NC_009633.1	3189085	3189534	R	PFAM: CheW domain protein; KEGG: chy:CHY_1030 chemotaxis protein CheW; putative CheW protein	complement(3189085..3189534)	Alkaliphilus metalliredigens QYMF	5313221
YP_001320943.1	CDS	Amet_3145	NC_009633.1	3189667	3189843	R	PFAM: protein of unknown function DUF896; KEGG: oih:OB1671 hypothetical protein; hypothetical protein	complement(3189667..3189843)	Alkaliphilus metalliredigens QYMF	5313222
YP_001320944.1	CDS	Amet_3146	NC_009633.1	3189932	3190723	R	hypothetical protein	complement(3189932..3190723)	Alkaliphilus metalliredigens QYMF	5313223
YP_001320945.1	CDS	Amet_3147	NC_009633.1	3190914	3191213	D	hypothetical protein	3190914..3191213	Alkaliphilus metalliredigens QYMF	5313224
YP_001320946.1	CDS	Amet_3148	NC_009633.1	3191266	3192534	R	catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway; imidazolonepropionase	complement(3191266..3192534)	Alkaliphilus metalliredigens QYMF	5313225
YP_001320947.1	CDS	Amet_3149	NC_009633.1	3192652	3194175	R	catalyzes the degradation of histidine to urocanate and ammmonia; histidine ammonia-lyase	complement(3192652..3194175)	Alkaliphilus metalliredigens QYMF	5313226
YP_001320948.1	CDS	Amet_3150	NC_009633.1	3194454	3194699	R	PFAM: protein of unknown function UPF0180; KEGG: swo:Swol_1506 hypothetical protein; hypothetical protein	complement(3194454..3194699)	Alkaliphilus metalliredigens QYMF	5313227
YP_001320949.1	CDS	Amet_3151	NC_009633.1	3194805	3195260	R	PFAM: regulatory protein, MarR; KEGG: gka:GK2669 transcriptional regulator (MarR family); MarR family transcriptional regulator	complement(3194805..3195260)	Alkaliphilus metalliredigens QYMF	5313228
YP_001320950.1	CDS	Amet_3152	NC_009633.1	3195490	3196413	D	PFAM: peptidase M23B; KEGG: tte:TTE0841 membrane proteins related to metalloendopeptidase; peptidase M23B	3195490..3196413	Alkaliphilus metalliredigens QYMF	5313229
YP_001320951.1	CDS	Amet_3153	NC_009633.1	3196449	3196829	D	PFAM: protein of unknown function DUF583; KEGG: tte:TTE0840 hypothetical protein; hypothetical protein	3196449..3196829	Alkaliphilus metalliredigens QYMF	5313230
YP_001320952.1	CDS	Amet_3154	NC_009633.1	3196879	3197784	R	PFAM: diacylglycerol kinase, catalytic region; KEGG: bcz:BCZK0294 hypothetical protein; diacylglycerol kinase catalytic subunit	complement(3196879..3197784)	Alkaliphilus metalliredigens QYMF	5313231
YP_001320953.1	CDS	Amet_3155	NC_009633.1	3197813	3199297	R	PFAM: regulatory protein GntR, HTH; aminotransferase, class I and II; KEGG: cth:Cthe_2689 transcriptional regulator, GntR family; GntR family transcriptional regulator	complement(3197813..3199297)	Alkaliphilus metalliredigens QYMF	5313232
YP_001320954.1	CDS	Amet_3156	NC_009633.1	3199526	3199717	R	KEGG: cac:CAC1617 hypothetical protein; hypothetical protein	complement(3199526..3199717)	Alkaliphilus metalliredigens QYMF	5313233
YP_001320955.1	CDS	Amet_3157	NC_009633.1	3199745	3201496	R	PFAM: Aldehyde ferredoxin oxidoreductase-like; KEGG: mac:MA2962 aldehyde ferredoxin oxidoreductase; aldehyde ferredoxin oxidoreductase	complement(3199745..3201496)	Alkaliphilus metalliredigens QYMF	5313234
YP_001320956.1	CDS	Amet_3158	NC_009633.1	3201493	3201924	R	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mma:MM3327 ferredoxin; 4Fe-4S ferredoxin	complement(3201493..3201924)	Alkaliphilus metalliredigens QYMF	5313235
YP_001320957.1	CDS	Amet_3159	NC_009633.1	3202199	3203947	D	PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: tte:TTE0836 ABC-type multidrug/protein/lipid transport system, ATPase component; ABC transporter-like protein	3202199..3203947	Alkaliphilus metalliredigens QYMF	5313236
YP_001320958.1	CDS	Amet_3160	NC_009633.1	3203965	3206040	D	PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: tte:TTE0835 ABC-type multidrug/protein/lipid transport system, ATPase component; ABC transporter-like protein	3203965..3206040	Alkaliphilus metalliredigens QYMF	5313237
YP_001320959.1	CDS	Amet_3161	NC_009633.1	3206773	3207996	D	TIGRFAM: arginine deiminase; PFAM: amidinotransferase; KEGG: efa:EF0104 arginine deiminase; arginine deiminase	3206773..3207996	Alkaliphilus metalliredigens QYMF	5313238
YP_001320960.1	CDS	Amet_3162	NC_009633.1	3208049	3208888	D	TIGRFAM: histidinol phosphate phosphatase HisJ family; PFAM: PHP C-terminal domain protein; KEGG: oih:OB0554 histidinol phosphatase; HisJ family histidinol phosphate phosphatase	3208049..3208888	Alkaliphilus metalliredigens QYMF	5313239
YP_001320961.1	CDS	Amet_3163	NC_009633.1	3209018	3209281	R	KEGG: gka:GK0630 hypothetical protein; hypothetical protein	complement(3209018..3209281)	Alkaliphilus metalliredigens QYMF	5313240
YP_001320962.1	CDS	Amet_3164	NC_009633.1	3209436	3210071	R	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sth:STH2889 hypothetical protein; diguanylate cyclase	complement(3209436..3210071)	Alkaliphilus metalliredigens QYMF	5313241
YP_001320963.1	CDS	Amet_3165	NC_009633.1	3210363	3211958	D	PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: cth:Cthe_2688 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein	3210363..3211958	Alkaliphilus metalliredigens QYMF	5313242
YP_001320964.1	CDS	Amet_3166	NC_009633.1	3211980	3213707	R	PFAM: PHP C-terminal domain protein; SMART: DNA polymerase X; phosphoesterase PHP domain protein; Helix-hairpin-helix DNA-binding, class 1; KEGG: tte:TTE2516 hypothetical DNA polymerase / putative histidinol phosphatase; phosphotransferase domain-containing protein	complement(3211980..3213707)	Alkaliphilus metalliredigens QYMF	5313243
YP_001320965.1	CDS	Amet_3167	NC_009633.1	3213821	3214264	R	PFAM: MOSC domain containing protein; KEGG: ppd:Ppro_0303 MOSC domain containing protein; MOSC domain-containing protein	complement(3213821..3214264)	Alkaliphilus metalliredigens QYMF	5313244
YP_001320966.1	CDS	Amet_3168	NC_009633.1	3214281	3216206	R	TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; MoeA domain protein, domain I and II; MoeA domain protein, domain IV; KEGG: cac:CAC2020 molybdopterin biosynthesis enzyme, MoeA, fused to molibdopterin-binding domain; putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein	complement(3214281..3216206)	Alkaliphilus metalliredigens QYMF	5313245
YP_001320967.1	CDS	Amet_3169	NC_009633.1	3216255	3217484	R	TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; MoeA domain protein, domain I and II; MoeA domain protein, domain IV; KEGG: chy:CHY_0798 putative molybdopterin biosynthesis MoeA protein; molybdenum cofactor synthesis domain-containing protein	complement(3216255..3217484)	Alkaliphilus metalliredigens QYMF	5313246
YP_001320968.1	CDS	Amet_3170	NC_009633.1	3218156	3219928	R	KEGG: ctc:CTC00531 ATP-dependent zinc metallopeptidase; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase, central domain protein; peptidase M41, FtsH extracellular; SMART: AAA ATPase; ATP-dependent metalloprotease FtsH	complement(3218156..3219928)	Alkaliphilus metalliredigens QYMF	5313247
YP_001320969.1	CDS	Amet_3171	NC_009633.1	3220176	3221213	R	KEGG: cth:Cthe_0313 hypothetical protein; hypothetical protein	complement(3220176..3221213)	Alkaliphilus metalliredigens QYMF	5313248
YP_001320970.1	CDS	Amet_3172	NC_009633.1	3221414	3221605	R	hypothetical protein	complement(3221414..3221605)	Alkaliphilus metalliredigens QYMF	5313249
YP_001320971.1	CDS	Amet_3173	NC_009633.1	3221987	3222913	R	TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; KEGG: cpr:CPR_2089 pseudouridylate synthase family protein, yabo; RluA family pseudouridine synthase	complement(3221987..3222913)	Alkaliphilus metalliredigens QYMF	5313251
YP_001320972.1	CDS	Amet_3174	NC_009633.1	3223191	3223997	D	PFAM: ATP-NAD/AcoX kinase; KEGG: ljo:LJ0824 probable inorganic polyphosphate/ATP-NAD kinase; NAD(+) kinase	3223191..3223997	Alkaliphilus metalliredigens QYMF	5313252
YP_001320973.1	CDS	Amet_3175	NC_009633.1	3224178	3225401	R	PFAM: sodium:dicarboxylate symporter; KEGG: ctc:CTC00822 proton/sodium-glutamate symport protein; sodium:dicarboxylate symporter	complement(3224178..3225401)	Alkaliphilus metalliredigens QYMF	5313253
YP_001320974.1	CDS	Amet_3176	NC_009633.1	3225684	3226583	R	PFAM: response regulator receiver; YcbB domain; KEGG: tte:TTE1203 CheY-like receiver domains; response regulator receiver protein	complement(3225684..3226583)	Alkaliphilus metalliredigens QYMF	5313254
YP_001320975.1	CDS	Amet_3178	NC_009633.1	3227119	3228579	D	KEGG: ctc:CTC00917 transposase; transposase	3227119..3228579	Alkaliphilus metalliredigens QYMF	5313256
YP_001320976.1	CDS	Amet_3179	NC_009633.1	3229778	3230368	R	hypothetical protein	complement(3229778..3230368)	Alkaliphilus metalliredigens QYMF	5313257
YP_001320977.1	CDS	Amet_3180	NC_009633.1	3230487	3230777	D	hypothetical protein	3230487..3230777	Alkaliphilus metalliredigens QYMF	5313258
YP_001320978.1	CDS	Amet_3181	NC_009633.1	3230801	3231427	R	hypothetical protein	complement(3230801..3231427)	Alkaliphilus metalliredigens QYMF	5313259
YP_001320979.1	CDS	Amet_3182	NC_009633.1	3231587	3232735	R	PFAM: sodium:dicarboxylate symporter; KEGG: cno:NT01CX_0943 sodium:dicarboxylate symporter family protein; sodium:dicarboxylate symporter	complement(3231587..3232735)	Alkaliphilus metalliredigens QYMF	5313260
YP_001320980.1	CDS	Amet_3183	NC_009633.1	3233045	3234298	D	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Fe-S cluster domain protein; KEGG: tte:TTE0887 ferredoxin 2; Fe-S cluster domain-containing protein	3233045..3234298	Alkaliphilus metalliredigens QYMF	5313261
YP_001320981.1	CDS	Amet_3184	NC_009633.1	3234386	3235051	R	KEGG: dsy:DSY4194 hypothetical protein; nitrogen regulatory protein P-II	complement(3234386..3235051)	Alkaliphilus metalliredigens QYMF	5313262
YP_001320982.1	CDS	Amet_3185	NC_009633.1	3235044	3236534	R	PFAM: protein of unknown function DUF1538; KEGG: dsy:DSY4195 hypothetical protein; hypothetical protein	complement(3235044..3236534)	Alkaliphilus metalliredigens QYMF	5313263
YP_001320983.1	CDS	Amet_3186	NC_009633.1	3237328	3238290	D	PFAM: NQR2 and RnfD family protein; KEGG: sth:STH897 Na+-transporting NADH-quinone reductase subunit 2; NQR2 and RnfD family protein	3237328..3238290	Alkaliphilus metalliredigens QYMF	5313265
YP_001320984.1	CDS	Amet_3187	NC_009633.1	3238287	3238889	D	PFAM: FMN-binding domain protein; KEGG: pgi:PG2180 NADH:ubiquinone oxidoreductase, Na translocating, C subunit; FMN-binding domain-containing protein	3238287..3238889	Alkaliphilus metalliredigens QYMF	5313266
YP_001320985.1	CDS	Amet_3188	NC_009633.1	3238891	3239520	D	PFAM: RnfA-Nqr electron transport subunit; KEGG: csa:Csal_1572 NADH:ubiquinone oxidoreductase, subunit D; RnfA-Nqr electron transport subunit	3238891..3239520	Alkaliphilus metalliredigens QYMF	5313267
YP_001320986.1	CDS	Amet_3189	NC_009633.1	3239520	3240110	D	PFAM: RnfA-Nqr electron transport subunit; KEGG: vch:VC2291 NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrE; RnfA-Nqr electron transport subunit	3239520..3240110	Alkaliphilus metalliredigens QYMF	5313268
YP_001320987.1	CDS	Amet_3190	NC_009633.1	3240127	3241227	D	PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: nmc:NMC0505 putative Na(+)-translocating NADH-ubiquinone reductase subunit F; oxidoreductase FAD/NAD(P)-binding subunit	3240127..3241227	Alkaliphilus metalliredigens QYMF	5313269
YP_001320988.1	CDS	Amet_3191	NC_009633.1	3241291	3241959	R	KEGG: cno:NT01CX_1567 probable enzyme with TIM-barrel fold; response regulator receiver protein	complement(3241291..3241959)	Alkaliphilus metalliredigens QYMF	5313270
YP_001320989.1	CDS	Amet_3192	NC_009633.1	3242049	3242408	R	hypothetical protein	complement(3242049..3242408)	Alkaliphilus metalliredigens QYMF	5313271
YP_001320990.1	CDS	Amet_3193	NC_009633.1	3242581	3243759	R	PFAM: aminotransferase class-III; KEGG: bcl:ABC2432 acetylornithine aminotransferase; class III aminotransferase	complement(3242581..3243759)	Alkaliphilus metalliredigens QYMF	5313272
YP_001320991.1	CDS	Amet_3194	NC_009633.1	3243756	3244976	R	TIGRFAM: aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; KEGG: bld:BLi02996 aspartokinase II (alpha and beta subunits); RBL03770; aspartate kinase	complement(3243756..3244976)	Alkaliphilus metalliredigens QYMF	5313273
YP_001320992.1	CDS	Amet_3195	NC_009633.1	3244983	3245696	R	PFAM: transferase hexapeptide repeat containing protein; Tetrahydrodipicolinate succinyltransferase N-terminal domain protein; KEGG: gka:GK1049 putative tetrahydrodipicolinate N-acetyltransferase; tetrahydrodipicolinate succinyltransferase domain-containing protein	complement(3244983..3245696)	Alkaliphilus metalliredigens QYMF	5313274
YP_001320993.1	CDS	Amet_3196	NC_009633.1	3245801	3246523	R	catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase	complement(3245801..3246523)	Alkaliphilus metalliredigens QYMF	5313275
YP_001320994.1	CDS	Amet_3197	NC_009633.1	3246538	3247410	R	catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase	complement(3246538..3247410)	Alkaliphilus metalliredigens QYMF	5313276
YP_001320995.1	CDS	Amet_3198	NC_009633.1	3247426	3248421	R	TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase, NAD - binding; Semialdehyde dehydrogenase, dimerisation region; KEGG: dvl:Dvul_0328 aspartate-semialdehyde dehydrogenase; aspartate-semialdehyde dehydrogenase	complement(3247426..3248421)	Alkaliphilus metalliredigens QYMF	5313277
YP_001320996.1	CDS	Amet_3199	NC_009633.1	3249125	3250108	R	PFAM: Peptidoglycan-binding LysM; cell wall hydrolase, SleB; KEGG: dsy:DSY3257 hypothetical protein; cell wall hydrolase SleB	complement(3249125..3250108)	Alkaliphilus metalliredigens QYMF	5313278
YP_001320997.1	CDS	Amet_3200	NC_009633.1	3250333	3251148	R	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: dre:402904 zgc:109720; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase	complement(3250333..3251148)	Alkaliphilus metalliredigens QYMF	5313279
YP_001320998.1	CDS	Amet_3201	NC_009633.1	3251247	3252374	R	TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: cac:CA_P0022 spore germination protein, GrkB; spore germination protein	complement(3251247..3252374)	Alkaliphilus metalliredigens QYMF	5313280
YP_001320999.1	CDS	Amet_3202	NC_009633.1	3252461	3254077	D	PFAM: GerA spore germination protein; KEGG: chy:CHY_0336 spore germination protein GerKA; GerA spore germination protein	3252461..3254077	Alkaliphilus metalliredigens QYMF	5313281
YP_001321000.1	CDS	Amet_3203	NC_009633.1	3254101	3255252	D	PFAM: spore germination B3 GerAC family protein; KEGG: dsy:DSY2110 hypothetical protein; spore germination B3 GerAC family protein	3254101..3255252	Alkaliphilus metalliredigens QYMF	5313282
YP_001321001.1	CDS	Amet_3204	NC_009633.1	3255252	3255476	D	hypothetical protein	3255252..3255476	Alkaliphilus metalliredigens QYMF	5313283
YP_001321002.1	CDS	Amet_3205	NC_009633.1	3255592	3256584	D	TIGRFAM: lipoyltransferase and lipoate-protein ligase; PFAM: biotin/lipoate A/B protein ligase; KEGG: tte:TTE0297 Lipoate-protein ligase A; lipoyltransferase and lipoate-protein ligase	3255592..3256584	Alkaliphilus metalliredigens QYMF	5313284
YP_001321003.1	CDS	Amet_3206	NC_009633.1	3256689	3257702	R	PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; ferredoxin-dependent glutamate synthase; KEGG: cpf:CPF_2132 FMN-dependent dehydrogenase; FMN-dependent alpha-hydroxy acid dehydrogenase	complement(3256689..3257702)	Alkaliphilus metalliredigens QYMF	5313285
YP_001321004.1	CDS	Amet_3207	NC_009633.1	3257976	3258509	R	hypothetical protein	complement(3257976..3258509)	Alkaliphilus metalliredigens QYMF	5313286
YP_001321005.1	CDS	Amet_3208	NC_009633.1	3258583	3260007	R	PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; KEGG: cac:CAC2434 membrane associatehistidine kinase with HAMP domain; integral membrane sensor signal transduction histidine kinase	complement(3258583..3260007)	Alkaliphilus metalliredigens QYMF	5313287
YP_001321006.1	CDS	Amet_3209	NC_009633.1	3260004	3260681	R	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cac:CAC2435 response regulator (CheY-like domain and HTH-type DNA-binding domain); two component transcriptional regulator	complement(3260004..3260681)	Alkaliphilus metalliredigens QYMF	5313288
YP_001321007.1	CDS	Amet_3210	NC_009633.1	3261088	3261852	R	TIGRFAM: putative CoA-substrate-specific enzyme activase; PFAM: ATPase, BadF/BadG/BcrA/BcrD type; KEGG: mta:Moth_1417 CoA enzyme activase; putative CoA-substrate-specific enzyme activase	complement(3261088..3261852)	Alkaliphilus metalliredigens QYMF	5313289
YP_001321008.1	CDS	Amet_3211	NC_009633.1	3261922	3263082	R	PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; KEGG: mta:Moth_1446 2-hydroxyglutaryl-CoA dehydratase, D-component; 2-hydroxyglutaryl-CoA dehydratase subunit D	complement(3261922..3263082)	Alkaliphilus metalliredigens QYMF	5313290
YP_001321009.1	CDS	Amet_3212	NC_009633.1	3263336	3264802	D	PFAM: GerA spore germination protein; KEGG: bld:BLi02663 hypothetical protein; GerA spore germination protein	3263336..3264802	Alkaliphilus metalliredigens QYMF	5313291
YP_001321010.1	CDS	Amet_3213	NC_009633.1	3264853	3266157	R	TIGRFAM: citrate/H+ symporter, CitMHS family; PFAM: C4-dicarboxylate anaerobic carrier; Citrate transporter; KEGG: bha:BH0745 magnesium citrate secondary transporter; CitMHS family citrate/H+ symporter	complement(3264853..3266157)	Alkaliphilus metalliredigens QYMF	5313292
YP_001321011.1	CDS	Amet_3214	NC_009633.1	3266229	3268529	R	PFAM: aconitate hydratase domain protein; KEGG: dsy:DSY4204 aconitase A; hypothetical protein	complement(3266229..3268529)	Alkaliphilus metalliredigens QYMF	5313293
YP_001321012.1	CDS	Amet_3215	NC_009633.1	3268668	3269606	D	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: cac:CAC3361 transcriptional regulator, LysR family; LysR family transcriptional regulator	3268668..3269606	Alkaliphilus metalliredigens QYMF	5313294
YP_001321013.1	CDS	Amet_3216	NC_009633.1	3269773	3271011	R	TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; PFAM: Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit; KEGG: saz:Sama_1053 oxaloacetate decarboxylase; sodium ion-translocating decarboxylase subunit beta	complement(3269773..3271011)	Alkaliphilus metalliredigens QYMF	5313295
YP_001321014.1	CDS	Amet_3217	NC_009633.1	3271049	3271435	R	PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: cth:Cthe_0700 biotin/lipoyl attachment protein; biotin/lipoyl attachment domain-containing protein	complement(3271049..3271435)	Alkaliphilus metalliredigens QYMF	5313296
YP_001321015.1	CDS	Amet_3218	NC_009633.1	3271458	3271859	R	PFAM: sodium pump decarboxylase, gamma subunit; sodium pump decarboxylase subunit gamma	complement(3271458..3271859)	Alkaliphilus metalliredigens QYMF	5313297
YP_001321016.1	CDS	Amet_3219	NC_009633.1	3271895	3273442	R	PFAM: carboxyl transferase; KEGG: tte:TTE2385 Acetyl-CoA carboxylase alpha subunit; carboxyl transferase	complement(3271895..3273442)	Alkaliphilus metalliredigens QYMF	5313298
YP_001321017.1	CDS	Amet_3220	NC_009633.1	3273550	3274947	R	Converts oxaloacetate to phosphoenolpyruvate using ATP as an energy source; oxaloacetate decarboxylase	complement(3273550..3274947)	Alkaliphilus metalliredigens QYMF	5313299
YP_001321018.1	CDS	Amet_3221	NC_009633.1	3275152	3276771	R	PFAM: chemotaxis sensory transducer; KEGG: mba:Mbar_A0989 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer	complement(3275152..3276771)	Alkaliphilus metalliredigens QYMF	5313300
YP_001321019.1	CDS	Amet_3222	NC_009633.1	3276965	3277477	R	PFAM: Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase; KEGG: ctc:CTC02556 citX protein; apo-citrate lyase phosphoribosyl-dephospho-CoA transferase	complement(3276965..3277477)	Alkaliphilus metalliredigens QYMF	5313301
YP_001321020.1	CDS	Amet_3223	NC_009633.1	3277477	3279030	R	TIGRFAM: citrate lyase, alpha subunit; PFAM: Citrate lyase, alpha subunit; KEGG: ctc:CTC02559 citrate lyase alpha chain; citrate lyase subunit alpha	complement(3277477..3279030)	Alkaliphilus metalliredigens QYMF	5313302
YP_001321021.1	CDS	Amet_3224	NC_009633.1	3279043	3279918	R	PFAM: HpcH/HpaI aldolase; KEGG: fnu:FN1379 citrate lyase beta chain / citryl-CoA lyase subunit; citrate (pro-3S)-lyase	complement(3279043..3279918)	Alkaliphilus metalliredigens QYMF	5313303
YP_001321022.1	CDS	Amet_3225	NC_009633.1	3279922	3280194	R	acyl carrier protein; with CitE and CitF catalyzes the formation of oxaloacetate from citrate; citrate lyase subunit gamma	complement(3279922..3280194)	Alkaliphilus metalliredigens QYMF	5313304
YP_001321023.1	CDS	Amet_3226	NC_009633.1	3280301	3281641	R	PFAM: Citrate carrier protein; KEGG: ppr:PBPRA2296 putative citrate-sodium symporter; citrate carrier protein	complement(3280301..3281641)	Alkaliphilus metalliredigens QYMF	5313305
YP_001321024.1	CDS	Amet_3227	NC_009633.1	3282023	3282790	R	PFAM: response regulator receiver; KEGG: cff:CFF8240_0377 DNA-binding response regulator; response regulator receiver protein	complement(3282023..3282790)	Alkaliphilus metalliredigens QYMF	5313306
YP_001321025.1	CDS	Amet_3228	NC_009633.1	3282783	3284543	R	PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; KEGG: ppd:Ppro_3165 signal transduction histidine kinase with CheB and CheR activity; integral membrane sensor signal transduction histidine kinase	complement(3282783..3284543)	Alkaliphilus metalliredigens QYMF	5313307
YP_001321026.1	CDS	Amet_3229	NC_009633.1	3284712	3285899	R	PFAM: malic protein domain protein; malic protein, NAD-binding; KEGG: ctc:CTC02463 NAD-dependent malic enzyme; malate dehydrogenase	complement(3284712..3285899)	Alkaliphilus metalliredigens QYMF	5313308
YP_001321027.1	CDS	Amet_3230	NC_009633.1	3286317	3287297	D	PFAM: putative sugar-binding domain protein; KEGG: cpr:CPR_1160 citrate lyase regulator, putative; DeoR family transcriptional regulator	3286317..3287297	Alkaliphilus metalliredigens QYMF	5313309
YP_001321028.1	CDS	Amet_3231	NC_009633.1	3287461	3287604	R	hypothetical protein	complement(3287461..3287604)	Alkaliphilus metalliredigens QYMF	5313310
YP_001321029.1	CDS	Amet_3232	NC_009633.1	3287619	3289028	R	PFAM: ATP-binding region, ATPase domain protein; KEGG: mta:Moth_0022 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase	complement(3287619..3289028)	Alkaliphilus metalliredigens QYMF	5313311
YP_001321030.1	CDS	Amet_3233	NC_009633.1	3289189	3289434	R	hypothetical protein	complement(3289189..3289434)	Alkaliphilus metalliredigens QYMF	5313312
YP_001321031.1	CDS	Amet_3234	NC_009633.1	3289526	3289717	R	hypothetical protein	complement(3289526..3289717)	Alkaliphilus metalliredigens QYMF	5313313
YP_001321032.1	CDS	Amet_3235	NC_009633.1	3289915	3290304	R	PFAM: Rhodanese domain protein; KEGG: dsy:DSY4705 hypothetical protein; rhodanese domain-containing protein	complement(3289915..3290304)	Alkaliphilus metalliredigens QYMF	5313314
YP_001321033.1	CDS	Amet_3236	NC_009633.1	3290441	3290977	R	KEGG: mta:Moth_2212 hypothetical protein; hypothetical protein	complement(3290441..3290977)	Alkaliphilus metalliredigens QYMF	5313315
YP_001321034.1	CDS	Amet_3237	NC_009633.1	3290974	3291453	R	KEGG: mta:Moth_2211 hypothetical protein; hypothetical protein	complement(3290974..3291453)	Alkaliphilus metalliredigens QYMF	5313316
YP_001321035.1	CDS	Amet_3238	NC_009633.1	3291549	3292325	R	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mac:MA4409 hypothetical protein; 4Fe-4S ferredoxin	complement(3291549..3292325)	Alkaliphilus metalliredigens QYMF	5313317
YP_001321036.1	CDS	Amet_3239	NC_009633.1	3292518	3293024	R	hypothetical protein	complement(3292518..3293024)	Alkaliphilus metalliredigens QYMF	5313318
YP_001321037.1	CDS	Amet_3240	NC_009633.1	3293203	3293748	D	PFAM: BioY protein; KEGG: cac:CAC3456 uncharacterized conserved protein, bioY family; BioY protein	3293203..3293748	Alkaliphilus metalliredigens QYMF	5313319
YP_001321038.1	CDS	Amet_3241	NC_009633.1	3293800	3294756	D	KEGG: cpf:CPF_1795 biotin synthase; TIGRFAM: biotin synthase; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB; biotin synthase	3293800..3294756	Alkaliphilus metalliredigens QYMF	5313320
YP_001321039.1	CDS	Amet_3242	NC_009633.1	3295275	3296612	R	PFAM: chemotaxis sensory transducer; KEGG: chy:CHY_1296 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer	complement(3295275..3296612)	Alkaliphilus metalliredigens QYMF	5313321
YP_001321040.1	CDS	Amet_3243	NC_009633.1	3296781	3296915	R	hypothetical protein	complement(3296781..3296915)	Alkaliphilus metalliredigens QYMF	5313322
YP_001321041.1	CDS	Amet_3244	NC_009633.1	3296943	3297098	R	hypothetical protein	complement(3296943..3297098)	Alkaliphilus metalliredigens QYMF	5313323
YP_001321042.1	CDS	Amet_3245	NC_009633.1	3297737	3299497	R	PFAM: Dynamin family protein; GTP-binding protein, HSR1-related; KEGG: tte:TTE1899 predicted GTPase (dynamin-related); dynamin family protein	complement(3297737..3299497)	Alkaliphilus metalliredigens QYMF	5313324
YP_001321043.1	CDS	Amet_3246	NC_009633.1	3299687	3301054	R	TIGRFAM: magnesium transporter; PFAM: CBS domain containing protein; MgtE integral membrane region; MgtE intracellular region; KEGG: cyb:CYB_2114 magnesium transporter; magnesium transporter	complement(3299687..3301054)	Alkaliphilus metalliredigens QYMF	5313325
YP_001321044.1	CDS	Amet_3247	NC_009633.1	3301907	3302146	R	KEGG: bca:BCE_A0242 Tn554-related, transposase A; Tn554-related, transposase A	complement(3301907..3302146)	Alkaliphilus metalliredigens QYMF	5313326
YP_001321045.1	CDS	Amet_3248	NC_009633.1	3302635	3302826	R	hypothetical protein	complement(3302635..3302826)	Alkaliphilus metalliredigens QYMF	5313327
YP_001321046.1	CDS	Amet_3249	NC_009633.1	3302930	3306658	R	TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; type IV pilus assembly PilZ; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; KEGG: dsy:DSY3381 hypothetical protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase	complement(3302930..3306658)	Alkaliphilus metalliredigens QYMF	5313328
YP_001321047.1	CDS	Amet_3250	NC_009633.1	3307037	3307177	R	hypothetical protein	complement(3307037..3307177)	Alkaliphilus metalliredigens QYMF	5313329
YP_001321048.1	CDS	Amet_3251	NC_009633.1	3307181	3307609	R	PFAM: Positive regulator of sigma(E), RseC/MucC; KEGG: cno:NT01CX_0096 positive regulator of sigma(E), RseC/MucC superfamily; sigma E positive regulator RseC/MucC	complement(3307181..3307609)	Alkaliphilus metalliredigens QYMF	5313330
YP_001321049.1	CDS	Amet_3252	NC_009633.1	3307645	3307854	R	hypothetical protein	complement(3307645..3307854)	Alkaliphilus metalliredigens QYMF	5313331
YP_001321050.1	CDS	Amet_3253	NC_009633.1	3307907	3309037	R	PFAM: YibE/F family protein; KEGG: cac:CAC2436 hypothetical protein; hypothetical protein	complement(3307907..3309037)	Alkaliphilus metalliredigens QYMF	5313332
YP_001321051.1	CDS	Amet_3254	NC_009633.1	3309093	3309938	R	PFAM: prolipoprotein diacylglyceryl transferase; KEGG: mta:Moth_1993 prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase	complement(3309093..3309938)	Alkaliphilus metalliredigens QYMF	5313333
YP_001321052.1	CDS	Amet_3255	NC_009633.1	3310144	3311493	R	PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; KEGG: gsu:GSU1320 sigma-54 dependent DNA-binding response regulator; two component sigma54 specific Fis family transcriptional regulator	complement(3310144..3311493)	Alkaliphilus metalliredigens QYMF	5313334
YP_001321053.1	CDS	Amet_3256	NC_009633.1	3311486	3312862	R	PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; KEGG: ecv:APECO1_4340 sensor protein AtoS; integral membrane sensor signal transduction histidine kinase	complement(3311486..3312862)	Alkaliphilus metalliredigens QYMF	5313335
YP_001321054.1	CDS	Amet_3257	NC_009633.1	3312890	3313144	R	KEGG: ctc:CTC00666 hypothetical protein; hypothetical protein	complement(3312890..3313144)	Alkaliphilus metalliredigens QYMF	5313336
YP_001321055.1	CDS	Amet_3258	NC_009633.1	3313403	3314806	R	PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; KEGG: tte:TTE2473 sensory transduction histidine kinase; integral membrane sensor signal transduction histidine kinase	complement(3313403..3314806)	Alkaliphilus metalliredigens QYMF	5313337
YP_001321056.1	CDS	Amet_3259	NC_009633.1	3314803	3315501	R	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: tte:TTE2474 response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain; two component transcriptional regulator	complement(3314803..3315501)	Alkaliphilus metalliredigens QYMF	5313338
YP_001321057.1	CDS	Amet_3260	NC_009633.1	3315597	3316103	R	hypothetical protein	complement(3315597..3316103)	Alkaliphilus metalliredigens QYMF	5313339
YP_001321058.1	CDS	Amet_3261	NC_009633.1	3316549	3317199	R	KEGG: pna:Pnap_4519 isoprenylcysteine carboxyl methyltransferase; isoprenylcysteine carboxyl methyltransferase	complement(3316549..3317199)	Alkaliphilus metalliredigens QYMF	5313340
YP_001321059.1	CDS	Amet_3262	NC_009633.1	3317414	3318463	R	PFAM: NLP/P60 protein; S-layer domain protein; KEGG: mta:Moth_2104 NLP/P60; NLP/P60 protein	complement(3317414..3318463)	Alkaliphilus metalliredigens QYMF	5313341
YP_001321060.1	CDS	Amet_3263	NC_009633.1	3318704	3318877	R	hypothetical protein	complement(3318704..3318877)	Alkaliphilus metalliredigens QYMF	5313342
YP_001321061.1	CDS	Amet_3264	NC_009633.1	3318970	3319248	R	hypothetical protein	complement(3318970..3319248)	Alkaliphilus metalliredigens QYMF	5313343
YP_001321062.1	CDS	Amet_3265	NC_009633.1	3319410	3319598	R	hypothetical protein	complement(3319410..3319598)	Alkaliphilus metalliredigens QYMF	5313344
YP_001321063.1	CDS	Amet_3266	NC_009633.1	3320111	3320413	R	hypothetical protein	complement(3320111..3320413)	Alkaliphilus metalliredigens QYMF	5313345
YP_001321064.1	CDS	Amet_3267	NC_009633.1	3320463	3321254	R	Contains selenocysteine; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: gka:GK0592 hypothetical protein; type 11 methyltransferase	complement(3320463..3321254)	Alkaliphilus metalliredigens QYMF	5313346
YP_001321065.1	CDS	Amet_3268	NC_009633.1	3321456	3322001	R	PFAM: SNARE associated Golgi protein; KEGG: ljo:LJ0674 hypothetical protein; hypothetical protein	complement(3321456..3322001)	Alkaliphilus metalliredigens QYMF	5313347
YP_001321066.1	CDS	Amet_3269	NC_009633.1	3322433	3322660	D	KEGG: mac:MA1327 hypothetical protein; hypothetical protein	3322433..3322660	Alkaliphilus metalliredigens QYMF	5313348
YP_001321067.1	CDS	Amet_3271	NC_009633.1	3323233	3323448	R	PFAM: Heavy metal transport/detoxification protein; KEGG: dsy:DSY4509 hypothetical protein; heavy metal transport/detoxification protein	complement(3323233..3323448)	Alkaliphilus metalliredigens QYMF	5313350
YP_001321068.1	CDS	Amet_3272	NC_009633.1	3323608	3326088	R	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: aeh:Mlg_1383 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase	complement(3323608..3326088)	Alkaliphilus metalliredigens QYMF	5313351
YP_001321069.1	CDS	Amet_3273	NC_009633.1	3326109	3326270	R	hypothetical protein	complement(3326109..3326270)	Alkaliphilus metalliredigens QYMF	5313352
YP_001321070.1	CDS	Amet_3274	NC_009633.1	3326456	3327145	R	TIGRFAM: integral membrane protein TIGR01906; PFAM: Integral membrane protein 1906; KEGG: tte:TTE1993 hypothetical protein; hypothetical protein	complement(3326456..3327145)	Alkaliphilus metalliredigens QYMF	5313353
YP_001321071.1	CDS	Amet_3275	NC_009633.1	3327261	3328277	R	TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: mfa:Mfla_2304 40-residue YVTN beta-propeller repeat; hypothetical protein	complement(3327261..3328277)	Alkaliphilus metalliredigens QYMF	5313354
YP_001321072.1	CDS	Amet_3276	NC_009633.1	3328305	3328895	R	hypothetical protein	complement(3328305..3328895)	Alkaliphilus metalliredigens QYMF	5313355
YP_001321073.1	CDS	Amet_3277	NC_009633.1	3329008	3329250	R	hypothetical protein	complement(3329008..3329250)	Alkaliphilus metalliredigens QYMF	5313356
YP_001321074.1	CDS	Amet_3278	NC_009633.1	3329251	3329421	R	hypothetical protein	complement(3329251..3329421)	Alkaliphilus metalliredigens QYMF	5313357
YP_001321075.1	CDS	Amet_3279	NC_009633.1	3329809	3330426	R	PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: ajs:Ajs_2160 methyltransferase type 11; type 11 methyltransferase	complement(3329809..3330426)	Alkaliphilus metalliredigens QYMF	5313358
YP_001321076.1	CDS	Amet_3280	NC_009633.1	3330499	3331821	R	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cth:Cthe_2566 radical SAM; radical SAM domain-containing protein	complement(3330499..3331821)	Alkaliphilus metalliredigens QYMF	5313359
YP_001321077.1	CDS	Amet_3282	NC_009633.1	3332333	3333028	D	PFAM: manganese containing catalase; KEGG: cac:CAC2800 CotJC-like protein (GS80 family); catalase	3332333..3333028	Alkaliphilus metalliredigens QYMF	5313361
YP_001321078.1	CDS	Amet_3284	NC_009633.1	3333461	3333703	R	hypothetical protein	complement(3333461..3333703)	Alkaliphilus metalliredigens QYMF	5313363
YP_001321079.1	CDS	Amet_3286	NC_009633.1	3334847	3336034	R	TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: tte:TTE0042 HD-GYP domain; metal dependent phosphohydrolase	complement(3334847..3336034)	Alkaliphilus metalliredigens QYMF	5313365
YP_001321080.1	CDS	Amet_3290	NC_009633.1	3339910	3340353	R	SMART: Rhodanese domain protein; KEGG: ppr:PBPRA1240 putative thiosulfate sulfur transferase; rhodanese domain-containing protein	complement(3339910..3340353)	Alkaliphilus metalliredigens QYMF	5313369
YP_001321081.1	CDS	Amet_3291	NC_009633.1	3340384	3341154	R	PFAM: Rhodanese domain protein; KEGG: cpr:CPR_1124 putative thiosulfate sulfurtransferase; rhodanese domain-containing protein	complement(3340384..3341154)	Alkaliphilus metalliredigens QYMF	5313370
YP_001321082.1	CDS	Amet_3292	NC_009633.1	3341515	3342540	R	PFAM: ABC transporter related; transport-associated protein OB domain protein; SMART: AAA ATPase; KEGG: cpe:CPE1270 probable ABC transporter; ABC transporter-like protein	complement(3341515..3342540)	Alkaliphilus metalliredigens QYMF	5313371
YP_001321083.1	CDS	Amet_3293	NC_009633.1	3342575	3343384	R	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: nca:Noca_2070 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein	complement(3342575..3343384)	Alkaliphilus metalliredigens QYMF	5313372
YP_001321084.1	CDS	Amet_3294	NC_009633.1	3343392	3344255	R	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dde:Dde_0308 ABC transporter, permease protein, putative; binding-protein-dependent transport system inner membrane protein	complement(3343392..3344255)	Alkaliphilus metalliredigens QYMF	5313373
YP_001321085.1	CDS	Amet_3295	NC_009633.1	3344269	3345522	R	KEGG: dde:Dde_0759 extracellular solute-binding protein, putative; putative ABC transporter solute-binding protein	complement(3344269..3345522)	Alkaliphilus metalliredigens QYMF	5313374
YP_001321086.1	CDS	Amet_3296	NC_009633.1	3345619	3346212	R	PFAM: CDP-alcohol phosphatidyltransferase; KEGG: cpf:CPF_0561 CDP-alcohol phosphatidyltransferase family protein; CDP-alcohol phosphatidyltransferase	complement(3345619..3346212)	Alkaliphilus metalliredigens QYMF	5313375
YP_001321087.1	CDS	Amet_3297	NC_009633.1	3346266	3347057	R	PFAM: SNARE associated Golgi protein; KEGG: dsy:DSY2706 hypothetical protein; hypothetical protein	complement(3346266..3347057)	Alkaliphilus metalliredigens QYMF	5313376
YP_001321088.1	CDS	Amet_3298	NC_009633.1	3347142	3348356	R	PFAM: protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: cpr:CPR_2072 cysteine-rich domain protein; hypothetical protein	complement(3347142..3348356)	Alkaliphilus metalliredigens QYMF	5313377
YP_001321089.1	CDS	Amet_3299	NC_009633.1	3348645	3349136	R	SMART: Rhodanese domain protein; KEGG: mac:MA0746 hypothetical protein; rhodanese domain-containing protein	complement(3348645..3349136)	Alkaliphilus metalliredigens QYMF	5313378
YP_001321090.1	CDS	Amet_3300	NC_009633.1	3349606	3350391	R	PFAM: protein of unknown function DUF450; KEGG: mma:MM2204 putative type I restriction enzyme R protein; hypothetical protein	complement(3349606..3350391)	Alkaliphilus metalliredigens QYMF	5313379
YP_001321091.1	CDS	Amet_3301	NC_009633.1	3350412	3351419	R	KEGG: tde:TDE0367 hypothetical protein; hypothetical protein	complement(3350412..3351419)	Alkaliphilus metalliredigens QYMF	5313380
YP_001321092.1	CDS	Amet_3302	NC_009633.1	3351443	3351646	R	KEGG: zmo:ZMO0901 hypothetical protein; hypothetical protein	complement(3351443..3351646)	Alkaliphilus metalliredigens QYMF	5313381
YP_001321093.1	CDS	Amet_3305	NC_009633.1	3354800	3355438	R	PFAM: TrkA-N domain protein; KEGG: cpr:CPR_1854 potassium uptake protein; TrkA domain-containing protein	complement(3354800..3355438)	Alkaliphilus metalliredigens QYMF	5313384
YP_001321094.1	CDS	Amet_3306	NC_009633.1	3355435	3355896	R	hypothetical protein	complement(3355435..3355896)	Alkaliphilus metalliredigens QYMF	5313385
YP_001321095.1	CDS	Amet_3307	NC_009633.1	3355897	3356592	R	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: dsy:DSY3761 hypothetical protein; two component transcriptional regulator	complement(3355897..3356592)	Alkaliphilus metalliredigens QYMF	5313386
YP_001321096.1	CDS	Amet_3308	NC_009633.1	3356592	3357977	R	PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; KEGG: dsy:DSY3762 hypothetical protein; integral membrane sensor signal transduction histidine kinase	complement(3356592..3357977)	Alkaliphilus metalliredigens QYMF	5313387
YP_001321097.1	CDS	Amet_3309	NC_009633.1	3358051	3358713	R	PFAM: TrkA-N domain protein; KEGG: cth:Cthe_1659 TrkA-N; TrkA domain-containing protein	complement(3358051..3358713)	Alkaliphilus metalliredigens QYMF	5313388
YP_001321098.1	CDS	Amet_3310	NC_009633.1	3358739	3360091	R	TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter; KEGG: cth:Cthe_1658 potassium uptake protein, TrkH family; TrkH family potassium uptake protein	complement(3358739..3360091)	Alkaliphilus metalliredigens QYMF	5313389
YP_001321099.1	CDS	Amet_3311	NC_009633.1	3360063	3360515	R	hypothetical protein	complement(3360063..3360515)	Alkaliphilus metalliredigens QYMF	5313390
YP_001321100.1	CDS	Amet_3313	NC_009633.1	3362495	3363811	R	PFAM: Citrate transporter; Na+/H+ antiporter NhaC; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: ctc:CTC02311 transport protein (putative Na+/H+ antiporter, similar to hisidine permease); Na+/H+ antiporter NhaC	complement(3362495..3363811)	Alkaliphilus metalliredigens QYMF	5313393
YP_001321101.1	CDS	Amet_3314	NC_009633.1	3364035	3364529	R	PFAM: PspC domain protein; KEGG: dsy:DSY4047 hypothetical protein; phage shock protein PspC	complement(3364035..3364529)	Alkaliphilus metalliredigens QYMF	5313394
YP_001321102.1	CDS	Amet_3315	NC_009633.1	3364620	3364808	R	hypothetical protein	complement(3364620..3364808)	Alkaliphilus metalliredigens QYMF	5313395
YP_001321103.1	CDS	Amet_3316	NC_009633.1	3365200	3365808	R	PFAM: protein of unknown function DUF624; KEGG: bha:BH2108 hypothetical protein; hypothetical protein	complement(3365200..3365808)	Alkaliphilus metalliredigens QYMF	5313396
YP_001321104.1	CDS	Amet_3317	NC_009633.1	3365981	3367606	R	PFAM: glycoside hydrolase, family 43; KEGG: oih:OB3125 xylan 1,4-beta-xylosidase; alpha-N-arabinofuranosidase	complement(3365981..3367606)	Alkaliphilus metalliredigens QYMF	5313397
YP_001321105.1	CDS	Amet_3318	NC_009633.1	3367696	3368598	R	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH3682 multiple sugar transport system permease protein; binding-protein-dependent transport system inner membrane protein	complement(3367696..3368598)	Alkaliphilus metalliredigens QYMF	5313398
YP_001321106.1	CDS	Amet_3319	NC_009633.1	3368610	3369488	R	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH3681 multiple sugar transport system permease protein; binding-protein-dependent transport system inner membrane protein	complement(3368610..3369488)	Alkaliphilus metalliredigens QYMF	5313399
YP_001321107.1	CDS	Amet_3320	NC_009633.1	3369660	3370985	R	PFAM: extracellular solute-binding protein, family 1; KEGG: bha:BH3680 multiple sugar transport system substrate-binding protein; extracellular solute-binding protein	complement(3369660..3370985)	Alkaliphilus metalliredigens QYMF	5313400
YP_001321108.1	CDS	Amet_3321	NC_009633.1	3371089	3371880	R	PFAM: helix-turn-helix- domain containing protein, AraC type; response regulator receiver; KEGG: bha:BH3679 two-component response regulator; response regulator receiver protein	complement(3371089..3371880)	Alkaliphilus metalliredigens QYMF	5313401
YP_001321109.1	CDS	Amet_3322	NC_009633.1	3371893	3373629	R	PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase internal region; KEGG: bha:BH3678 two-component sensor histidine kinase; histidine kinase internal subunit	complement(3371893..3373629)	Alkaliphilus metalliredigens QYMF	5313402
YP_001321110.1	CDS	Amet_3323	NC_009633.1	3374138	3375247	D	PFAM: ABC transporter related; TOBE domain protein; transport-associated protein OB domain protein; SMART: AAA ATPase; KEGG: tte:TTE1979 ABC-type sugar/spermidine/putrescine/iron/thiamine transport systems, ATPase component; ABC transporter-like protein	3374138..3375247	Alkaliphilus metalliredigens QYMF	5313403
YP_001321111.1	CDS	Amet_3324	NC_009633.1	3375307	3376359	D	KEGG: cth:Cthe_1861 transcriptional regulator, CdaR; transcriptional regulator CdaR	3375307..3376359	Alkaliphilus metalliredigens QYMF	5313404
YP_001321112.1	CDS	Amet_3325	NC_009633.1	3376475	3377389	R	PFAM: peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysin; KEGG: oih:OB0530 carboxypeptidase; peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysin	complement(3376475..3377389)	Alkaliphilus metalliredigens QYMF	5313405
YP_001321113.1	CDS	Amet_3326	NC_009633.1	3377501	3378109	R	TIGRFAM: xanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: cpr:CPR_0313 xanthine phosphoribosyltransferase; xanthine phosphoribosyltransferase	complement(3377501..3378109)	Alkaliphilus metalliredigens QYMF	5313406
YP_001321114.1	CDS	Amet_3327	NC_009633.1	3378512	3379528	R	TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; KEGG: pfu:PF0194 dipeptide ABC transporter, ATP-binding protein; oligopeptide/dipeptide ABC transporter ATPase	complement(3378512..3379528)	Alkaliphilus metalliredigens QYMF	5313407
YP_001321115.1	CDS	Amet_3328	NC_009633.1	3379528	3380571	R	TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; KEGG: pol:Bpro_4402 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; oligopeptide/dipeptide ABC transporter ATPase	complement(3379528..3380571)	Alkaliphilus metalliredigens QYMF	5313408
YP_001321116.1	CDS	Amet_3329	NC_009633.1	3380574	3381500	R	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_4403 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein	complement(3380574..3381500)	Alkaliphilus metalliredigens QYMF	5313409
YP_001321117.1	CDS	Amet_3330	NC_009633.1	3381531	3382502	R	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_4405 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein	complement(3381531..3382502)	Alkaliphilus metalliredigens QYMF	5313410
YP_001321118.1	CDS	Amet_3331	NC_009633.1	3382606	3384264	R	PFAM: extracellular solute-binding protein, family 5; KEGG: pol:Bpro_4406 twin-arginine translocation pathway signal; extracellular solute-binding protein	complement(3382606..3384264)	Alkaliphilus metalliredigens QYMF	5313411
YP_001321119.1	CDS	Amet_3332	NC_009633.1	3384535	3385116	R	PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: cth:Cthe_0614 pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate ferredoxin/flavodoxin oxidoreductase	complement(3384535..3385116)	Alkaliphilus metalliredigens QYMF	5313412
YP_001321120.1	CDS	Amet_3333	NC_009633.1	3385109	3386923	R	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; KEGG: swo:Swol_1196 thiamine pyrophosphate enzyme; indolepyruvate ferredoxin oxidoreductase	complement(3385109..3386923)	Alkaliphilus metalliredigens QYMF	5313413
YP_001321121.1	CDS	Amet_3334	NC_009633.1	3387184	3388209	D	catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase	3387184..3388209	Alkaliphilus metalliredigens QYMF	5313414
YP_001321122.1	CDS	Amet_3335	NC_009633.1	3388307	3389170	R	PFAM: PP-loop domain protein; KEGG: cpr:CPR_1477 PP-loop family protein; PP-loop domain-containing protein	complement(3388307..3389170)	Alkaliphilus metalliredigens QYMF	5313415
YP_001321123.1	CDS	Amet_3336	NC_009633.1	3389392	3390948	D	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ctc:CTC00588 ABC transporter ATP-binding protein; ABC transporter-like protein	3389392..3390948	Alkaliphilus metalliredigens QYMF	5313416
YP_001321124.1	CDS	Amet_3337	NC_009633.1	3391041	3391289	R	hypothetical protein	complement(3391041..3391289)	Alkaliphilus metalliredigens QYMF	5313417
YP_001321125.1	CDS	Amet_3338	NC_009633.1	3391510	3392586	D	PFAM: creatinase; peptidase M24; KEGG: cpe:CPE2497 probable proline dipeptidase; peptidase M24	3391510..3392586	Alkaliphilus metalliredigens QYMF	5313418
YP_001321126.1	CDS	Amet_3339	NC_009633.1	3392782	3392922	D	YBDT Bacillus subtilis ortholog; KEGG: cac:CAC3330 cytochrome P450 family protein, YBDT B.subtilis ortholog; cytochrome P450 family protein	3392782..3392922	Alkaliphilus metalliredigens QYMF	5313419
YP_001321127.1	CDS	Amet_3340	NC_009633.1	3393010	3393372	R	KEGG: sth:STH2800 hypothetical protein; hypothetical protein	complement(3393010..3393372)	Alkaliphilus metalliredigens QYMF	5313420
YP_001321128.1	CDS	Amet_3341	NC_009633.1	3393372	3393548	R	hypothetical protein	complement(3393372..3393548)	Alkaliphilus metalliredigens QYMF	5313421
YP_001321129.1	CDS	Amet_3342	NC_009633.1	3393548	3393748	R	KEGG: bha:BH1975 hypothetical protein; hypothetical protein	complement(3393548..3393748)	Alkaliphilus metalliredigens QYMF	5313422
YP_001321130.1	CDS	Amet_3343	NC_009633.1	3393735	3394676	R	KEGG: bha:BH1976 hypothetical protein; hypothetical protein	complement(3393735..3394676)	Alkaliphilus metalliredigens QYMF	5313423
YP_001321131.1	CDS	Amet_3344	NC_009633.1	3394937	3397264	D	PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: bha:BH1977 hypothetical protein; molybdopterin binding aldehyde oxidase and xanthine dehydrogenase	3394937..3397264	Alkaliphilus metalliredigens QYMF	5313424
YP_001321132.1	CDS	Amet_3345	NC_009633.1	3397261	3398103	D	PFAM: molybdopterin dehydrogenase, FAD-binding; KEGG: bha:BH1977 hypothetical protein; FAD-binding molybdopterin dehydrogenase	3397261..3398103	Alkaliphilus metalliredigens QYMF	5313425
YP_001321133.1	CDS	Amet_3346	NC_009633.1	3398096	3398560	D	PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bha:BH1978 hypothetical protein; 2Fe-2S iron-sulfur cluster binding domain-containing protein	3398096..3398560	Alkaliphilus metalliredigens QYMF	5313426
YP_001321134.1	CDS	Amet_3347	NC_009633.1	3398639	3398911	R	KEGG: bha:BH1979 hypothetical protein; hypothetical protein	complement(3398639..3398911)	Alkaliphilus metalliredigens QYMF	5313427
YP_001321135.1	CDS	Amet_3348	NC_009633.1	3399305	3401485	R	decatenates replicating daughter chromosomes; DNA topoisomerase III	complement(3399305..3401485)	Alkaliphilus metalliredigens QYMF	5313428
YP_001321136.1	CDS	Amet_3349	NC_009633.1	3401617	3402294	R	PFAM: Abortive infection protein; KEGG: ana:alr7029 unknown protein; abortive infection protein	complement(3401617..3402294)	Alkaliphilus metalliredigens QYMF	5313429
YP_001321137.1	CDS	Amet_3350	NC_009633.1	3402451	3404100	R	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: bcz:BCZK2223 ATP-dependent RNA helicase; DEAD/DEAH box helicase	complement(3402451..3404100)	Alkaliphilus metalliredigens QYMF	5313430
YP_001321138.1	CDS	Amet_3351	NC_009633.1	3404562	3405236	R	PFAM: Abortive infection protein; KEGG: bcz:BCZK4727 CAAX amino terminal protease family protein; abortive infection protein	complement(3404562..3405236)	Alkaliphilus metalliredigens QYMF	5313431
YP_001321139.1	CDS	Amet_3352	NC_009633.1	3405440	3406138	R	hypothetical protein	complement(3405440..3406138)	Alkaliphilus metalliredigens QYMF	5313432
YP_001321140.1	CDS	Amet_3353	NC_009633.1	3406320	3406817	R	hypothetical protein	complement(3406320..3406817)	Alkaliphilus metalliredigens QYMF	5313433
YP_001321141.1	CDS	Amet_3354	NC_009633.1	3407037	3407267	R	hypothetical protein	complement(3407037..3407267)	Alkaliphilus metalliredigens QYMF	5313434
YP_001321142.1	CDS	Amet_3355	NC_009633.1	3407832	3408038	D	PFAM: protein of unknown function UPF0150; KEGG: mta:Moth_0249 hypothetical protein; hypothetical protein	3407832..3408038	Alkaliphilus metalliredigens QYMF	5313435
YP_001321143.1	CDS	Amet_3356	NC_009633.1	3408038	3408265	D	PFAM: YcfA family protein; KEGG: mta:Moth_0250 YcfA-like; hypothetical protein	3408038..3408265	Alkaliphilus metalliredigens QYMF	5313436
YP_001321144.1	CDS	Amet_3357	NC_009633.1	3408473	3409363	R	PFAM: Streptomycin adenylyltransferase; KEGG: bce:BC1959 aminoglycoside 6-adenylyltransferase; adenylyltransferase	complement(3408473..3409363)	Alkaliphilus metalliredigens QYMF	5313437
YP_001321145.1	CDS	Amet_3358	NC_009633.1	3409666	3410181	R	KEGG: pab:PAB1336 methyl-accepting chemotaxis protein; hypothetical protein	complement(3409666..3410181)	Alkaliphilus metalliredigens QYMF	5313438
YP_001321146.1	CDS	Amet_3359	NC_009633.1	3410348	3411352	R	PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; KEGG: mac:MA4626 reverse transcriptase; RNA-directed DNA polymerase	complement(3410348..3411352)	Alkaliphilus metalliredigens QYMF	5313439
YP_001321147.1	CDS	Amet_3360	NC_009633.1	3411912	3413969	D	PFAM: Resolvase, N-terminal domain; KEGG: fra:Francci3_2088 recombinase; resolvase domain-containing protein	3411912..3413969	Alkaliphilus metalliredigens QYMF	5313440
YP_001321148.1	CDS	Amet_3361	NC_009633.1	3413927	3414370	R	KEGG: mac:MA4628 reverse transcriptase; hypothetical protein	complement(3413927..3414370)	Alkaliphilus metalliredigens QYMF	5313441
YP_001321149.1	CDS	Amet_3362	NC_009633.1	3415638	3416369	R	KEGG: sfu:Sfum_3865 hypothetical protein; hypothetical protein	complement(3415638..3416369)	Alkaliphilus metalliredigens QYMF	5313442
YP_001321150.1	CDS	Amet_3363	NC_009633.1	3416815	3417999	R	PFAM: putative transposase; KEGG: aeh:Mlg_1798 putative transposase; putative transposase	complement(3416815..3417999)	Alkaliphilus metalliredigens QYMF	5313443
YP_001321151.1	CDS	Amet_3364	NC_009633.1	3418352	3418576	D	PFAM: SpoVT/AbrB domain protein; KEGG: sru:SRU_2815 putative addiction module antidote; transcriptional regulator/antitoxin MazE	3418352..3418576	Alkaliphilus metalliredigens QYMF	5313444
YP_001321152.1	CDS	Amet_3365	NC_009633.1	3418573	3418965	D	TIGRFAM: death-on-curing family protein; PFAM: Death-on-curing protein; KEGG: ana:alr9029 putative death on curing protein; death-on-curing family protein	3418573..3418965	Alkaliphilus metalliredigens QYMF	5313445
YP_001321153.1	CDS	Amet_3366	NC_009633.1	3419161	3419724	R	PFAM: GCN5-related N-acetyltransferase; KEGG: bce:BC2992 ribosomal-protein-alanine acetyltransferase; N-acetyltransferase GCN5	complement(3419161..3419724)	Alkaliphilus metalliredigens QYMF	5313446
YP_001321154.1	CDS	Amet_3367	NC_009633.1	3420097	3420615	R	PFAM: GCN5-related N-acetyltransferase; KEGG: oih:OB2857 hypothetical protein; N-acetyltransferase GCN5	complement(3420097..3420615)	Alkaliphilus metalliredigens QYMF	5313447
YP_001321155.1	CDS	Amet_3368	NC_009633.1	3420835	3421851	R	hypothetical protein	complement(3420835..3421851)	Alkaliphilus metalliredigens QYMF	5313448
YP_001321156.1	CDS	Amet_3369	NC_009633.1	3422044	3422400	D	PFAM: protein of unknown function DUF891; KEGG: hin:HI0660 hypothetical protein; hypothetical protein	3422044..3422400	Alkaliphilus metalliredigens QYMF	5313449
YP_001321157.1	CDS	Amet_3370	NC_009633.1	3422403	3422672	D	PFAM: helix-turn-helix domain protein; KEGG: gme:Gmet_0315 transcriptional regulator, XRE family; XRE family transcriptional regulator	3422403..3422672	Alkaliphilus metalliredigens QYMF	5313450
YP_001321158.1	CDS	Amet_3371	NC_009633.1	3423179	3424765	D	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cno:NT01CX_0281 ABC transporter, ATP-binding protein; ABC transporter-like protein	3423179..3424765	Alkaliphilus metalliredigens QYMF	5313451
YP_001321159.1	CDS	Amet_3372	NC_009633.1	3424917	3426851	R	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cpf:CPF_2868 ABC transporter, ATP-binding protein; ABC transporter-like protein	complement(3424917..3426851)	Alkaliphilus metalliredigens QYMF	5313452
YP_001321160.1	CDS	Amet_3373	NC_009633.1	3426921	3429290	R	PFAM: dihydropteroate synthase, DHPS; homocysteine S-methyltransferase; Methionine synthase, B12-binding module, cap domain protein; cobalamin B12-binding domain protein; KEGG: ctc:CTC01806 5-methyltetrahydrofolate--homocysteine methyltransferase; homocysteine S-methyltransferase	complement(3426921..3429290)	Alkaliphilus metalliredigens QYMF	5313453
YP_001321161.1	CDS	Amet_3374	NC_009633.1	3429268	3429948	R	PFAM: Vitamin B12 dependent methionine synthase, activation region; KEGG: ctc:CTC01807 putative 5-methyltetrahydrofolate--homocysteine methyltransferase; vitamin B12 dependent methionine synthase, activation region	complement(3429268..3429948)	Alkaliphilus metalliredigens QYMF	5313454
YP_001321162.1	CDS	Amet_3375	NC_009633.1	3429972	3430856	R	PFAM: methylenetetrahydrofolate reductase; KEGG: cth:Cthe_0099 5,10-methylenetetrahydrofolate reductase; methylenetetrahydrofolate reductase	complement(3429972..3430856)	Alkaliphilus metalliredigens QYMF	5313455
YP_001321163.1	CDS	Amet_3376	NC_009633.1	3430870	3432147	R	TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aminotransferase, class I and II; KEGG: lmf:LMOf2365_0624 O-acetylhomoserine (thiol)-lyase; O-acetylhomoserine/O-acetylserine sulfhydrylase	complement(3430870..3432147)	Alkaliphilus metalliredigens QYMF	5313456
YP_001321164.1	CDS	Amet_3377	NC_009633.1	3432842	3433804	D	PFAM: SCP-like extracellular protein; KEGG: bha:BH2878 hypothetical protein; SCP-like extracellular protein	3432842..3433804	Alkaliphilus metalliredigens QYMF	5313457
YP_001321165.1	CDS	Amet_3378	NC_009633.1	3433914	3437141	R	TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp; protein of unknown function DUF201; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain, oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; MGS domain protein; KEGG: tte:TTE0816 Carbamoylphosphate synthase large subunit (split gene in MJ); carbamoyl-phosphate synthase large subunit	complement(3433914..3437141)	Alkaliphilus metalliredigens QYMF	5313458
YP_001321166.1	CDS	Amet_3379	NC_009633.1	3437186	3438268	R	TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; Carbamoyl-phosphate synthase, small chain; KEGG: cth:Cthe_0950 carbamoyl-phosphate synthase, small subunit; carbamoyl-phosphate synthase small subunit	complement(3437186..3438268)	Alkaliphilus metalliredigens QYMF	5313459
YP_001321167.1	CDS	Amet_3380	NC_009633.1	3438268	3439467	R	TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: mta:Moth_2287 acetylornithine and succinylornithine aminotransferases; acetylornithine and succinylornithine aminotransferase	complement(3438268..3439467)	Alkaliphilus metalliredigens QYMF	5313460
YP_001321168.1	CDS	Amet_3381	NC_009633.1	3439382	3440332	R	TIGRFAM: acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: mta:Moth_2288 acetylglutamate kinase; acetylglutamate kinase	complement(3439382..3440332)	Alkaliphilus metalliredigens QYMF	5313461
YP_001321169.1	CDS	argJ	NC_009633.1	3440345	3441565	R	bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase	complement(3440345..3441565)	Alkaliphilus metalliredigens QYMF	5313462
YP_001321170.1	CDS	Amet_3383	NC_009633.1	3441594	3442634	R	TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase, NAD - binding; Semialdehyde dehydrogenase, dimerisation region; KEGG: dsy:DSY0760 hypothetical protein; N-acetyl-gamma-glutamyl-phosphate reductase	complement(3441594..3442634)	Alkaliphilus metalliredigens QYMF	5313463
YP_001321171.1	CDS	Amet_3384	NC_009633.1	3442912	3443367	R	TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; KEGG: bfs:BF3378 putative peptide methionine sulfoxide reductase; methionine-R-sulfoxide reductase	complement(3442912..3443367)	Alkaliphilus metalliredigens QYMF	5313464
YP_001321172.1	CDS	Amet_3385	NC_009633.1	3443516	3444088	R	PFAM: response regulator receiver; ANTAR domain protein; KEGG: mta:Moth_1295 response regulator receiver (CheY-like) and ANTAR domain protein; response regulator receiver/ANTAR domain-containing protein	complement(3443516..3444088)	Alkaliphilus metalliredigens QYMF	5313465
YP_001321173.1	CDS	Amet_3386	NC_009633.1	3444192	3445517	R	TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp; KEGG: mta:Moth_1294 glutamine synthetase, type I; glutamine synthetase, type I	complement(3444192..3445517)	Alkaliphilus metalliredigens QYMF	5313466
YP_001321174.1	CDS	gatB	NC_009633.1	3445761	3447191	R	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B	complement(3445761..3447191)	Alkaliphilus metalliredigens QYMF	5313467
YP_001321175.1	CDS	gatA	NC_009633.1	3447194	3448669	R	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A	complement(3447194..3448669)	Alkaliphilus metalliredigens QYMF	5313468
YP_001321176.1	CDS	Amet_3389	NC_009633.1	3448709	3448993	R	TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase, C subunit; KEGG: cac:CAC2978 Glu-tRNA amidotransferase, subunit C; glutamyl-tRNA(Gln) amidotransferase subunit C	complement(3448709..3448993)	Alkaliphilus metalliredigens QYMF	5313469
YP_001321177.1	CDS	aspC	NC_009633.1	3449009	3450307	R	catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase	complement(3449009..3450307)	Alkaliphilus metalliredigens QYMF	5313470
YP_001321178.1	CDS	Amet_3391	NC_009633.1	3450797	3451159	R	PFAM: nitrogen regulatory protein P-II; KEGG: cac:CAC0681 nitrogen regulatory protein PII, gene nrgB; nitrogen regulatory protein P-II	complement(3450797..3451159)	Alkaliphilus metalliredigens QYMF	5313471
YP_001321179.1	CDS	Amet_3392	NC_009633.1	3451229	3452485	R	TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: bth:BT_0544 ammonium transporter; ammonium transporter	complement(3451229..3452485)	Alkaliphilus metalliredigens QYMF	5313472
YP_001321180.1	CDS	Amet_3393	NC_009633.1	3452873	3454084	D	PFAM: phosphoesterase, DHHA1; Threonyl/alanyl tRNA synthetase, SAD; KEGG: cpf:CPF_0714 DHHA1 domain protein; threonyl/alanyl tRNA synthetase	3452873..3454084	Alkaliphilus metalliredigens QYMF	5313473
YP_001321181.1	CDS	Amet_3394	NC_009633.1	3454214	3455335	R	TIGRFAM: transposase, IS605 OrfB family; PFAM: putative transposase, IS891/IS1136/IS1341 family; transposase, IS605 OrfB; KEGG: bcz:pE33L466_0272 transposase; IS605 family transposase OrfB	complement(3454214..3455335)	Alkaliphilus metalliredigens QYMF	5313474
YP_001321182.1	CDS	Amet_3395	NC_009633.1	3455332	3455817	R	PFAM: transposase IS200-family protein; KEGG: ctc:CTC00621 transposase; transposase IS200-family protein	complement(3455332..3455817)	Alkaliphilus metalliredigens QYMF	5313475
YP_001321183.1	CDS	Amet_3396	NC_009633.1	3455943	3456908	R	PFAM: Auxin Efflux Carrier; KEGG: ssp:SSP0142 putative permease; auxin efflux carrier	complement(3455943..3456908)	Alkaliphilus metalliredigens QYMF	5313476
YP_001321184.1	CDS	Amet_3397	NC_009633.1	3457185	3461678	R	PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: cac:CAC1673 large subunit of NADH-dependent glutamate synthase; glutamate synthase	complement(3457185..3461678)	Alkaliphilus metalliredigens QYMF	5313477
YP_001321185.1	CDS	Amet_3398	NC_009633.1	3462501	3462770	D	PFAM: amino acid-binding ACT domain protein; KEGG: cth:Cthe_0409 ACT domain-containing protein; ACT domain-containing protein	3462501..3462770	Alkaliphilus metalliredigens QYMF	5313478
YP_001321186.1	CDS	Amet_3399	NC_009633.1	3462791	3464149	D	PFAM: protein of unknown function DUF711; KEGG: ctc:CTC01034 hypothetical protein; hypothetical protein	3462791..3464149	Alkaliphilus metalliredigens QYMF	5313479
YP_001321187.1	CDS	Amet_3400	NC_009633.1	3464288	3465952	R	TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein, central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: cth:Cthe_2714 acetolactate synthase, large subunit, biosynthetic type; acetolactate synthase large subunit	complement(3464288..3465952)	Alkaliphilus metalliredigens QYMF	5313480
YP_001321188.1	CDS	Amet_3401	NC_009633.1	3465971	3467629	R	TIGRFAM: dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; KEGG: cth:Cthe_2713 dihydroxy-acid dehydratase; dihydroxy-acid dehydratase	complement(3465971..3467629)	Alkaliphilus metalliredigens QYMF	5313481
YP_001321189.1	CDS	Amet_3402	NC_009633.1	3467665	3468666	R	TIGRFAM: ketol-acid reductoisomerase; PFAM: acetohydroxy acid isomeroreductase; Acetohydroxy acid isomeroreductase, catalytic domain protein; KEGG: tte:TTE0015 Ketol-acid reductoisomerase; ketol-acid reductoisomerase	complement(3467665..3468666)	Alkaliphilus metalliredigens QYMF	5313482
YP_001321190.1	CDS	Amet_3403	NC_009633.1	3468743	3469222	R	TIGRFAM: acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; KEGG: cth:Cthe_2517 acetolactate synthase, small subunit; acetolactate synthase small subunit	complement(3468743..3469222)	Alkaliphilus metalliredigens QYMF	5313483
YP_001321191.1	CDS	Amet_3404	NC_009633.1	3470176	3471420	D	catalyzes the formation of 2-oxobutanoate from L-threonine; threonine dehydratase	3470176..3471420	Alkaliphilus metalliredigens QYMF	5313484
YP_001321192.1	CDS	Amet_3405	NC_009633.1	3471728	3473185	D	PFAM: Collagen triple helix repeat; KEGG: ter:Tery_0397 phage tail collar; triple helix repeat-containing collagen	3471728..3473185	Alkaliphilus metalliredigens QYMF	5313485
YP_001321193.1	CDS	Amet_3406	NC_009633.1	3473347	3474432	D	PFAM: glycosyl transferase, family 2; KEGG: dsy:DSY4437 hypothetical protein; glycosyl transferase family protein	3473347..3474432	Alkaliphilus metalliredigens QYMF	5313486
YP_001321194.1	CDS	Amet_3407	NC_009633.1	3474573	3475901	R	catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; lysine and threonine sensitive; aspartate kinase	complement(3474573..3475901)	Alkaliphilus metalliredigens QYMF	5313487
YP_001321195.1	CDS	Amet_3408	NC_009633.1	3476263	3477150	R	PFAM: triphosphoribosyl-dephospho-CoA protein; KEGG: ctc:CTC02555 citG protein; triphosphoribosyl-dephospho-CoA synthase	complement(3476263..3477150)	Alkaliphilus metalliredigens QYMF	5313488
YP_001321196.1	CDS	Amet_3409	NC_009633.1	3477227	3478768	R	TIGRFAM: citrate lyase, alpha subunit; PFAM: Citrate lyase, alpha subunit; KEGG: ctc:CTC02559 citrate lyase alpha chain; citrate lyase subunit alpha	complement(3477227..3478768)	Alkaliphilus metalliredigens QYMF	5313489
YP_001321197.1	CDS	Amet_3410	NC_009633.1	3478782	3479654	R	PFAM: HpcH/HpaI aldolase; KEGG: ctc:CTC02560 citrate lyase beta chain; citryl-CoA lyase	complement(3478782..3479654)	Alkaliphilus metalliredigens QYMF	5313490
YP_001321198.1	CDS	Amet_3411	NC_009633.1	3479666	3479929	R	acyl carrier protein; with CitE and CitF catalyzes the formation of oxaloacetate from citrate; citrate lyase subunit gamma	complement(3479666..3479929)	Alkaliphilus metalliredigens QYMF	5313491
YP_001321199.1	CDS	Amet_3412	NC_009633.1	3479939	3480496	R	TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate beta region; KEGG: ctc:CTC02561 fumarate hydratase subunit B; tartrate/fumarate subfamily Fe-S type hydro-lyase subunit beta	complement(3479939..3480496)	Alkaliphilus metalliredigens QYMF	5313492
YP_001321200.1	CDS	Amet_3413	NC_009633.1	3480510	3481352	R	Catalyzes the reversible hydration of fumaric acid to yield I-malic acid; fumarate hydratase	complement(3480510..3481352)	Alkaliphilus metalliredigens QYMF	5313493
YP_001321201.1	CDS	Amet_3414	NC_009633.1	3481352	3482638	R	PFAM: methylaspartate ammonia-lyase; KEGG: ctc:CTC02563 methylaspartate ammonia-lyase; methylaspartate ammonia-lyase	complement(3481352..3482638)	Alkaliphilus metalliredigens QYMF	5313494
YP_001321202.1	CDS	Amet_3415	NC_009633.1	3482744	3484198	R	TIGRFAM: methylaspartate mutase, E subunit; PFAM: methylaspartate mutase E subunit; KEGG: ctc:CTC02565 glutamate mutase, MutE; methylaspartate mutase subunit E	complement(3482744..3484198)	Alkaliphilus metalliredigens QYMF	5313495
YP_001321203.1	CDS	Amet_3416	NC_009633.1	3484264	3484719	R	converts methylaspartate to L-glutamate; methylaspartate mutase subunit S	complement(3484264..3484719)	Alkaliphilus metalliredigens QYMF	5313496
YP_001321204.1	CDS	Amet_3417	NC_009633.1	3484733	3485695	R	PFAM: regulatory protein GntR, HTH; KEGG: ctc:CTC02569 transcriptional regulator, putative regular for glutamate degradation; regulatory protein GntR	complement(3484733..3485695)	Alkaliphilus metalliredigens QYMF	5313497
YP_001321205.1	CDS	Amet_3418	NC_009633.1	3486656	3488371	D	TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein, central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: eba:ebA4751 putative acetolactate synthase large subunit; acetolactate synthase large subunit	3486656..3488371	Alkaliphilus metalliredigens QYMF	5313498
YP_001321206.1	CDS	Amet_3419	NC_009633.1	3488364	3488666	D	TIGRFAM: acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; KEGG: eca:ECA3849 acetolactate synthase isozyme I small subunit; acetolactate synthase small subunit	3488364..3488666	Alkaliphilus metalliredigens QYMF	5313499
YP_001321207.1	CDS	Amet_3420	NC_009633.1	3488716	3490245	R	PFAM: Domain of unknown function DUF1846; KEGG: ctc:CTC00401 ATP-dependent Zn protease; hypothetical protein	complement(3488716..3490245)	Alkaliphilus metalliredigens QYMF	5313500
YP_001321208.1	CDS	Amet_3421	NC_009633.1	3490479	3491723	R	hypothetical protein	complement(3490479..3491723)	Alkaliphilus metalliredigens QYMF	5313501
YP_001321209.1	CDS	Amet_3422	NC_009633.1	3491827	3493035	R	KEGG: pca:Pcar_1367 hypothetical protein; hypothetical protein	complement(3491827..3493035)	Alkaliphilus metalliredigens QYMF	5313502
YP_001321210.1	CDS	Amet_3423	NC_009633.1	3493142	3494470	D	KEGG: bce:BC0877 IG hypothetical 16724; hypothetical protein	3493142..3494470	Alkaliphilus metalliredigens QYMF	5313503
YP_001321211.1	CDS	Amet_3424	NC_009633.1	3494530	3495930	D	KEGG: bld:BLi01055 YheD; hypothetical protein	3494530..3495930	Alkaliphilus metalliredigens QYMF	5313504
YP_001321212.1	CDS	Amet_3425	NC_009633.1	3496142	3497464	R	KEGG: bsu:BG13036 similar to hypothetical proteins from B. subtilis; hypothetical protein	complement(3496142..3497464)	Alkaliphilus metalliredigens QYMF	5313505
YP_001321213.1	CDS	Amet_3426	NC_009633.1	3497579	3498790	D	PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase, middle domain protein; KEGG: cth:Cthe_0977 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase; Mur ligase middle domain-containing protein	3497579..3498790	Alkaliphilus metalliredigens QYMF	5313506
YP_001321214.1	CDS	Amet_3427	NC_009633.1	3498838	3499611	D	PFAM: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; KEGG: bha:BH1535 D-alanyl-D-alanine carboxypeptidase (penicilin binding protein); serine-type D-Ala-D-Ala carboxypeptidase	3498838..3499611	Alkaliphilus metalliredigens QYMF	5313507
YP_001321215.1	CDS	Amet_3428	NC_009633.1	3499779	3500882	R	KEGG: bsu:BG13036 similar to hypothetical proteins from B. subtilis; hypothetical protein	complement(3499779..3500882)	Alkaliphilus metalliredigens QYMF	5313508
YP_001321216.1	CDS	Amet_3429	NC_009633.1	3500891	3502051	R	KEGG: bsu:BG13036 similar to hypothetical proteins from B. subtilis; hypothetical protein	complement(3500891..3502051)	Alkaliphilus metalliredigens QYMF	5313509
YP_001321217.1	CDS	Amet_3430	NC_009633.1	3502322	3503077	R	PFAM: SCP-like extracellular protein; KEGG: sth:STH564 hypothetical protein; SCP-like extracellular protein	complement(3502322..3503077)	Alkaliphilus metalliredigens QYMF	5313510
YP_001321218.1	CDS	Amet_3431	NC_009633.1	3503285	3503563	D	KEGG: mta:Moth_1267 hypothetical protein; hypothetical protein	3503285..3503563	Alkaliphilus metalliredigens QYMF	5313511
YP_001321219.1	CDS	Amet_3432	NC_009633.1	3503598	3503894	D	hypothetical protein	3503598..3503894	Alkaliphilus metalliredigens QYMF	5313512
YP_001321220.1	CDS	Amet_3433	NC_009633.1	3503960	3504301	D	hypothetical protein	3503960..3504301	Alkaliphilus metalliredigens QYMF	5313513
YP_001321221.1	CDS	Amet_3434	NC_009633.1	3504466	3505119	D	KEGG: mta:Moth_1269 hypothetical protein; hypothetical protein	3504466..3505119	Alkaliphilus metalliredigens QYMF	5313514
YP_001321222.1	CDS	Amet_3435	NC_009633.1	3505184	3505978	R	KEGG: cth:Cthe_0923 hypothetical protein; hypothetical protein	complement(3505184..3505978)	Alkaliphilus metalliredigens QYMF	5313515
YP_001321223.1	CDS	Amet_3436	NC_009633.1	3506265	3507227	R	PFAM: glycosyl transferase, family 2; KEGG: bld:BLi00807 hypothetical protein; glycosyl transferase family protein	complement(3506265..3507227)	Alkaliphilus metalliredigens QYMF	5313516
YP_001321224.1	CDS	Amet_3437	NC_009633.1	3507533	3510124	R	PFAM: Collagen triple helix repeat; KEGG: bld:BLi00801 hypothetical protein; triple helix repeat-containing collagen	complement(3507533..3510124)	Alkaliphilus metalliredigens QYMF	5313517
YP_001321225.1	CDS	Amet_3438	NC_009633.1	3510699	3511850	D	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: tte:TTE0651 predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; DegT/DnrJ/EryC1/StrS aminotransferase	3510699..3511850	Alkaliphilus metalliredigens QYMF	5313518
YP_001321226.1	CDS	Amet_3439	NC_009633.1	3511890	3513197	D	PFAM: UDP-glucose/GDP-mannose dehydrogenase; 6-phosphogluconate dehydrogenase, NAD-binding; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase-like; KEGG: tth:TTC0288 UDP-N-acetyl-D-mannosamine 6-dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase	3511890..3513197	Alkaliphilus metalliredigens QYMF	5313519
YP_001321227.1	CDS	Amet_3440	NC_009633.1	3513249	3513668	R	hypothetical protein	complement(3513249..3513668)	Alkaliphilus metalliredigens QYMF	5313520
YP_001321228.1	CDS	Amet_3441	NC_009633.1	3513748	3514731	R	KEGG: bld:BLi00805 hypothetical protein; hypothetical protein	complement(3513748..3514731)	Alkaliphilus metalliredigens QYMF	5313521
YP_001321229.1	CDS	Amet_3442	NC_009633.1	3514728	3515675	R	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; Male sterility C-terminal domain; KEGG: pfu:PF1788 UDP-glucose 4-epimerase; NAD-dependent epimerase/dehydratase	complement(3514728..3515675)	Alkaliphilus metalliredigens QYMF	5313522
YP_001321230.1	CDS	Amet_3443	NC_009633.1	3515697	3516698	R	KEGG: bsu:BG13318 spore protein; spore protein	complement(3515697..3516698)	Alkaliphilus metalliredigens QYMF	5313523
YP_001321231.1	CDS	Amet_3444	NC_009633.1	3516784	3517794	R	PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; homoserine dehydrogenase, NAD-binding; KEGG: swo:Swol_0706 putative oxidoreductase; oxidoreductase domain-containing protein	complement(3516784..3517794)	Alkaliphilus metalliredigens QYMF	5313524
YP_001321232.1	CDS	Amet_3445	NC_009633.1	3517797	3518378	R	KEGG: swo:Swol_0704 hexapeptide transferase family protein; hexapeptide transferase family protein	complement(3517797..3518378)	Alkaliphilus metalliredigens QYMF	5313525
YP_001321233.1	CDS	Amet_3446	NC_009633.1	3518574	3519944	R	KEGG: bld:BLi01055 YheD; hypothetical protein	complement(3518574..3519944)	Alkaliphilus metalliredigens QYMF	5313526
YP_001321234.1	CDS	Amet_3447	NC_009633.1	3520439	3520654	D	hypothetical protein	3520439..3520654	Alkaliphilus metalliredigens QYMF	5313527
YP_001321235.1	CDS	Amet_3448	NC_009633.1	3520736	3521767	D	KEGG: swo:Swol_1168 YheD; hypothetical protein	3520736..3521767	Alkaliphilus metalliredigens QYMF	5313528
YP_001321236.1	CDS	Amet_3449	NC_009633.1	3521807	3522712	D	hypothetical protein	3521807..3522712	Alkaliphilus metalliredigens QYMF	5313529
YP_001321237.1	CDS	Amet_3450	NC_009633.1	3522933	3523628	D	PFAM: glycosyl transferase, family 2; KEGG: mta:Moth_1660 glycosyl transferase, family 2; glycosyl transferase family protein	3522933..3523628	Alkaliphilus metalliredigens QYMF	5313530
YP_001321238.1	CDS	Amet_3451	NC_009633.1	3523732	3524193	D	KEGG: mta:Moth_1659 hypothetical protein; hypothetical protein	3523732..3524193	Alkaliphilus metalliredigens QYMF	5313531
YP_001321239.1	CDS	Amet_3452	NC_009633.1	3524309	3525424	D	PFAM: glycosyl transferase, group 1; KEGG: mta:Moth_1658 glycosyl transferase, group 1; group 1 glycosyl transferase	3524309..3525424	Alkaliphilus metalliredigens QYMF	5313532
YP_001321240.1	CDS	Amet_3453	NC_009633.1	3525461	3525994	D	KEGG: mta:Moth_1657 hypothetical protein; hypothetical protein	3525461..3525994	Alkaliphilus metalliredigens QYMF	5313533
YP_001321241.1	CDS	Amet_3454	NC_009633.1	3526050	3526907	R	TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: cac:CAC3284 uncharacterized conserved protein, DegV family; DegV family protein	complement(3526050..3526907)	Alkaliphilus metalliredigens QYMF	5313534
YP_001321242.1	CDS	Amet_3455	NC_009633.1	3527191	3528276	R	TIGRFAM: 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: cth:Cthe_2209 3-isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase	complement(3527191..3528276)	Alkaliphilus metalliredigens QYMF	5313535
YP_001321243.1	CDS	Amet_3456	NC_009633.1	3528278	3528793	R	TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein; KEGG: cth:Cthe_2210 3-isopropylmalate dehydratase, small subunit; 3-isopropylmalate dehydratase small subunit	complement(3528278..3528793)	Alkaliphilus metalliredigens QYMF	5313536
YP_001321244.1	CDS	Amet_3457	NC_009633.1	3528809	3530071	R	TIGRFAM: homoaconitate hydratase family protein; 3-isopropylmalate dehydratase, large subunit; 3-isopropylmalate dehydratase; PFAM: aconitate hydratase domain protein; KEGG: cth:Cthe_2211 3-isopropylmalate dehydratase, large subunit; 3-isopropylmalate dehydratase large subunit	complement(3528809..3530071)	Alkaliphilus metalliredigens QYMF	5313537
YP_001321245.1	CDS	Amet_3458	NC_009633.1	3530102	3531643	R	TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: gme:Gmet_1265 2-isopropylmalate synthase; 2-isopropylmalate synthase	complement(3530102..3531643)	Alkaliphilus metalliredigens QYMF	5313538
YP_001321246.1	CDS	Amet_3459	NC_009633.1	3532188	3533168	D	KEGG: mma:MM0519 hypothetical protein; hypothetical protein	3532188..3533168	Alkaliphilus metalliredigens QYMF	5313539
YP_001321247.1	CDS	Amet_3460	NC_009633.1	3533262	3535070	R	TIGRFAM: flavocytochrome c; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FMN-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ctc:CTC01488 fumarate reductase flavoprotein subunit; flavocytochrome c	complement(3533262..3535070)	Alkaliphilus metalliredigens QYMF	5313540
YP_001321248.1	CDS	Amet_3461	NC_009633.1	3535536	3536936	R	PFAM: Citrate transporter; Na+/H+ antiporter NhaC; KEGG: bce:BC0373 Na+/H+ antiporter NnaC; Na+/H+ antiporter NhaC	complement(3535536..3536936)	Alkaliphilus metalliredigens QYMF	5313541
YP_001321249.1	CDS	Amet_3462	NC_009633.1	3537512	3538006	D	PFAM: protein of unknown function DUF520; KEGG: dsy:DSY1969 hypothetical protein; hypothetical protein	3537512..3538006	Alkaliphilus metalliredigens QYMF	5313542
YP_001321250.1	CDS	Amet_3463	NC_009633.1	3538119	3538349	R	hypothetical protein	complement(3538119..3538349)	Alkaliphilus metalliredigens QYMF	5313543
YP_001321251.1	CDS	Amet_3464	NC_009633.1	3538380	3538907	R	PFAM: protein of unknown function DUF1456; KEGG: bce:BC0368 hypothetical cytosolic protein; hypothetical protein	complement(3538380..3538907)	Alkaliphilus metalliredigens QYMF	5313544
YP_001321252.1	CDS	Amet_3465	NC_009633.1	3539076	3539378	R	hypothetical protein	complement(3539076..3539378)	Alkaliphilus metalliredigens QYMF	5313545
YP_001321253.1	CDS	Amet_3466	NC_009633.1	3539755	3540189	D	PFAM: Ferritin, Dps family protein; KEGG: fnu:FN1079 neutrophil-activating protein A; Ferritin, Dps family protein	3539755..3540189	Alkaliphilus metalliredigens QYMF	5313546
YP_001321254.1	CDS	Amet_3467	NC_009633.1	3540346	3542151	R	TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; KEGG: hwa:HQ1765A probable glycine betaine transport protein; choline/carnitine/betaine transporter	complement(3540346..3542151)	Alkaliphilus metalliredigens QYMF	5313547
YP_001321255.1	CDS	Amet_3468	NC_009633.1	3542623	3543987	R	TIGRFAM: glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase; KEGG: tte:TTE1005 Glucose-6-phosphate 1-dehydrogenase; glucose-6-phosphate 1-dehydrogenase	complement(3542623..3543987)	Alkaliphilus metalliredigens QYMF	5313548
YP_001321256.1	CDS	Amet_3469	NC_009633.1	3543996	3544892	R	similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate; 6-phosphogluconate dehydrogenase	complement(3543996..3544892)	Alkaliphilus metalliredigens QYMF	5313549
YP_001321257.1	CDS	Amet_3470	NC_009633.1	3544947	3545714	R	TIGRFAM: 6-phosphogluconolactonase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: osa:4346232 Os08g0547100; 6-phosphogluconolactonase	complement(3544947..3545714)	Alkaliphilus metalliredigens QYMF	5313550
YP_001321258.1	CDS	Amet_3471	NC_009633.1	3546118	3547833	R	PFAM: S-layer domain protein; S-layer protein	complement(3546118..3547833)	Alkaliphilus metalliredigens QYMF	5313551
YP_001321259.1	CDS	Amet_3472	NC_009633.1	3547923	3549146	R	KEGG: gka:GK3175 hypothetical protein; hypothetical protein	complement(3547923..3549146)	Alkaliphilus metalliredigens QYMF	5313552
YP_001321260.1	CDS	Amet_3473	NC_009633.1	3549133	3549696	R	PFAM: Fimbrial assembly family protein; KEGG: cno:NT01CX_1597 fimbrial assembly protein (PilN) superfamily; fimbrial assembly family protein	complement(3549133..3549696)	Alkaliphilus metalliredigens QYMF	5313553
YP_001321261.1	CDS	Amet_3474	NC_009633.1	3549719	3550891	R	TIGRFAM: type IV pilus assembly protein PilM; KEGG: cno:NT01CX_1603 probable fimbrial assembly protein, putative; type IV pilus assembly protein PilM	complement(3549719..3550891)	Alkaliphilus metalliredigens QYMF	5313554
YP_001321262.1	CDS	Amet_3475	NC_009633.1	3550994	3551767	R	PFAM: peptidase A24A, prepilin type IV; peptidase A24A domain protein; KEGG: tte:TTE1266 leader peptidase (prepilin peptidase) / N-methyltransferase; peptidase A24A domain-containing protein	complement(3550994..3551767)	Alkaliphilus metalliredigens QYMF	5313555
YP_001321263.1	CDS	Amet_3476	NC_009633.1	3551787	3553361	R	hypothetical protein	complement(3551787..3553361)	Alkaliphilus metalliredigens QYMF	5313556
YP_001321264.1	CDS	Amet_3477	NC_009633.1	3553409	3554029	R	hypothetical protein	complement(3553409..3554029)	Alkaliphilus metalliredigens QYMF	5313557
YP_001321265.1	CDS	Amet_3478	NC_009633.1	3554087	3555811	R	hypothetical protein	complement(3554087..3555811)	Alkaliphilus metalliredigens QYMF	5313558
YP_001321266.1	CDS	Amet_3479	NC_009633.1	3556172	3556510	R	KEGG: cpf:CPF_2566 putative type IV pilin; putative type IV pilin	complement(3556172..3556510)	Alkaliphilus metalliredigens QYMF	5313559
YP_001321267.1	CDS	Amet_3480	NC_009633.1	3556547	3557764	R	PFAM: type II secretion system protein; KEGG: tte:TTE1264 General secretory pathway protein F; type II secretion system protein	complement(3556547..3557764)	Alkaliphilus metalliredigens QYMF	5313560
YP_001321268.1	CDS	Amet_3481	NC_009633.1	3557807	3558862	R	TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: AAA ATPase; KEGG: tte:TTE1263 predicted ATPases involved in pili biogenesis, PilT homologs; twitching motility protein	complement(3557807..3558862)	Alkaliphilus metalliredigens QYMF	5313561
YP_001321269.1	CDS	Amet_3482	NC_009633.1	3558895	3560580	R	PFAM: type II secretion system protein E; General secretory system II, protein E domain protein; SMART: AAA ATPase; KEGG: tte:TTE1262 predicted ATPases involved in pili biogenesis, PilB homologs; type II secretion system protein E	complement(3558895..3560580)	Alkaliphilus metalliredigens QYMF	5313562
YP_001321270.1	CDS	Amet_3483	NC_009633.1	3561184	3563511	R	TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; metal-dependent phosphohydrolase, HD sub domain; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; metal-dependent phosphohydrolase, HD region; KEGG: swo:Swol_2483 putative PAS/PAC sensor protein; diguanylate cyclase and metal dependent phosphohydrolase	complement(3561184..3563511)	Alkaliphilus metalliredigens QYMF	5313563
YP_001321271.1	CDS	Amet_3484	NC_009633.1	3563633	3564949	R	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: gme:Gmet_1690 radical SAM; radical SAM domain-containing protein	complement(3563633..3564949)	Alkaliphilus metalliredigens QYMF	5313564
YP_001321272.1	CDS	Amet_3485	NC_009633.1	3564951	3566300	R	PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: dsy:DSY4423 hypothetical protein; radical SAM domain-containing protein	complement(3564951..3566300)	Alkaliphilus metalliredigens QYMF	5313565
YP_001321273.1	CDS	Amet_3486	NC_009633.1	3566281	3566961	R	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cac:CAC3419 S-adenosylmethionine-dependent methyltransferase; type 12 methyltransferase	complement(3566281..3566961)	Alkaliphilus metalliredigens QYMF	5313566
YP_001321274.1	CDS	Amet_3487	NC_009633.1	3566954	3568279	R	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: dsy:DSY4423 hypothetical protein; radical SAM domain-containing protein	complement(3566954..3568279)	Alkaliphilus metalliredigens QYMF	5313567
YP_001321275.1	CDS	Amet_3488	NC_009633.1	3568251	3569261	R	KEGG: hch:HCH_01946 hypothetical protein; hypothetical protein	complement(3568251..3569261)	Alkaliphilus metalliredigens QYMF	5313568
YP_001321276.1	CDS	Amet_3489	NC_009633.1	3569277	3570353	R	KEGG: chu:CHU_0264 hypothetical protein; hypothetical protein	complement(3569277..3570353)	Alkaliphilus metalliredigens QYMF	5313569
YP_001321277.1	CDS	Amet_3490	NC_009633.1	3570894	3572066	D	PFAM: aminotransferase, class I and II; KEGG: mta:Moth_1955 aminotransferase, class I and II; class I and II aminotransferase	3570894..3572066	Alkaliphilus metalliredigens QYMF	5313570
YP_001321278.1	CDS	Amet_3491	NC_009633.1	3572136	3573329	D	KEGG: btk:BT9727_4274 conserved hypothetical protein, possible methyltransferase; hypothetical protein	3572136..3573329	Alkaliphilus metalliredigens QYMF	5313571
YP_001321279.1	CDS	Amet_3492	NC_009633.1	3573424	3575271	R	TIGRFAM: small GTP-binding protein; sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor, GTP-binding; elongation factor Tu, domain 2 protein; KEGG: cth:Cthe_2537 sulfate adenylyltransferase, large subunit; sulfate adenylyltransferase, large subunit	complement(3573424..3575271)	Alkaliphilus metalliredigens QYMF	5313572
YP_001321280.1	CDS	Amet_3493	NC_009633.1	3575356	3576237	R	with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2	complement(3575356..3576237)	Alkaliphilus metalliredigens QYMF	5313573
YP_001321281.1	CDS	Amet_3494	NC_009633.1	3576250	3576564	R	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: cac:CAC0105 ferredoxin; 4Fe-4S ferredoxin	complement(3576250..3576564)	Alkaliphilus metalliredigens QYMF	5313574
YP_001321282.1	CDS	Amet_3495	NC_009633.1	3576548	3578236	R	catalyzes the reduction of adenosine 5'-phosphosulfate to AMP and sulfite; adenylylsulfate reductase subunit alpha	complement(3576548..3578236)	Alkaliphilus metalliredigens QYMF	5313575
YP_001321283.1	CDS	Amet_3496	NC_009633.1	3578253	3578849	R	PFAM: adenylylsulfate kinase; KEGG: cac:CAC0103 adenylylsulfate kinase; adenylylsulfate kinase	complement(3578253..3578849)	Alkaliphilus metalliredigens QYMF	5313576
YP_001321284.1	CDS	Amet_3497	NC_009633.1	3578861	3580303	R	TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; Citrate transporter; KEGG: gme:Gmet_2857 sodium/sulphate symporter; anion transporter	complement(3578861..3580303)	Alkaliphilus metalliredigens QYMF	5313577
YP_001321285.1	CDS	Amet_3498	NC_009633.1	3580316	3580942	R	hypothetical protein	complement(3580316..3580942)	Alkaliphilus metalliredigens QYMF	5313578
YP_001321286.1	CDS	Amet_3499	NC_009633.1	3580951	3583251	R	PFAM: nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: wsu:WS1004 hypothetical protein; sulfite reductase (ferredoxin)	complement(3580951..3583251)	Alkaliphilus metalliredigens QYMF	5313579
YP_001321287.1	CDS	Amet_3500	NC_009633.1	3583271	3583684	R	PFAM: Mov34/MPN/PAD-1 family protein; KEGG: cth:Cthe_2540 Mov34/MPN/PAD-1; Mov34/MPN/PAD-1 family protein	complement(3583271..3583684)	Alkaliphilus metalliredigens QYMF	5313580
YP_001321288.1	CDS	Amet_3501	NC_009633.1	3583712	3584521	R	PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: cth:Cthe_2539 UBA/ThiF-type NAD/FAD binding fold; UBA/THIF-type NAD/FAD binding protein	complement(3583712..3584521)	Alkaliphilus metalliredigens QYMF	5313581
YP_001321289.1	CDS	Amet_3502	NC_009633.1	3584511	3584726	R	TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: cth:Cthe_2538 thiamine biosynthesis protein ThiS; thiamine biosynthesis protein ThiS	complement(3584511..3584726)	Alkaliphilus metalliredigens QYMF	5313582
YP_001321290.1	CDS	Amet_3503	NC_009633.1	3585154	3585636	R	TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: btk:BT9727_3116 probable transcriptional regulator; ybaK/ebsC protein	complement(3585154..3585636)	Alkaliphilus metalliredigens QYMF	5313583
YP_001321291.1	CDS	Amet_3505	NC_009633.1	3586055	3586642	D	PFAM: regulatory protein, TetR; KEGG: cac:CAC2605 transcriptional regulator (TetR/AcrR family); TetR family transcriptional regulator	3586055..3586642	Alkaliphilus metalliredigens QYMF	5313585
YP_001321292.1	CDS	Amet_3506	NC_009633.1	3586779	3587702	R	KEGG: bha:BH1891 hypothetical protein; hypothetical protein	complement(3586779..3587702)	Alkaliphilus metalliredigens QYMF	5313586
YP_001321293.1	CDS	Amet_3507	NC_009633.1	3587814	3588506	R	hypothetical protein	complement(3587814..3588506)	Alkaliphilus metalliredigens QYMF	5313587
YP_001321294.1	CDS	Amet_3508	NC_009633.1	3588665	3588997	R	hypothetical protein	complement(3588665..3588997)	Alkaliphilus metalliredigens QYMF	5313588
YP_001321295.1	CDS	Amet_3509	NC_009633.1	3589441	3589836	R	PFAM: OsmC family protein; KEGG: cph:Cpha266_1001 OsmC family protein; OsmC family protein	complement(3589441..3589836)	Alkaliphilus metalliredigens QYMF	5313589
YP_001321296.1	CDS	Amet_3510	NC_009633.1	3589928	3590980	R	PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: dsy:DSY4242 hypothetical protein; threonine aldolase	complement(3589928..3590980)	Alkaliphilus metalliredigens QYMF	5313590
YP_001321297.1	CDS	Amet_3511	NC_009633.1	3591118	3592674	R	PFAM: protein of unknown function DUF112, transmembrane; KEGG: bha:BH2009 hypothetical protein; hypothetical protein	complement(3591118..3592674)	Alkaliphilus metalliredigens QYMF	5313591
YP_001321298.1	CDS	Amet_3512	NC_009633.1	3592692	3593177	R	hypothetical protein	complement(3592692..3593177)	Alkaliphilus metalliredigens QYMF	5313592
YP_001321299.1	CDS	Amet_3513	NC_009633.1	3593374	3594408	R	PFAM: Uncharacterized protein UPF0065; KEGG: bha:BH2007 hypothetical protein; hypothetical protein	complement(3593374..3594408)	Alkaliphilus metalliredigens QYMF	5313593
YP_001321300.1	CDS	Amet_3514	NC_009633.1	3594717	3595784	R	TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: HhH-GPD family protein; Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; KEGG: dsy:DSY2079 hypothetical protein; methylated-DNA--protein-cysteine methyltransferase	complement(3594717..3595784)	Alkaliphilus metalliredigens QYMF	5313594
YP_001321301.1	CDS	Amet_3515	NC_009633.1	3595875	3597014	R	PFAM: pyruvate carboxyltransferase; KEGG: tte:TTE0472 homocitrate synthase; pyruvate carboxyltransferase	complement(3595875..3597014)	Alkaliphilus metalliredigens QYMF	5313595
YP_001321302.1	CDS	Amet_3516	NC_009633.1	3597285	3597593	R	KEGG: mgm:Mmc1_0047 ferredoxin, 2Fe-2S; ferredoxin, 2Fe-2S	complement(3597285..3597593)	Alkaliphilus metalliredigens QYMF	5313596
YP_001321303.1	CDS	Amet_3517	NC_009633.1	3597619	3598866	R	TIGRFAM: nitrogenase cofactor biosynthesis protein NifB; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cac:CAC0259 fusion nifN/K+nifB (nifN-nitrogenase iron molybdenum cofactor biosinthesis protein, nifK-nitrogenase molibdenum-iron protein beta chain, nifB-nitrogenase iron-molibdenum cofactor biosynthesis protein); nitrogenase cofactor biosynthesis protein NifB	complement(3597619..3598866)	Alkaliphilus metalliredigens QYMF	5313597
YP_001321304.1	CDS	Amet_3518	NC_009633.1	3598984	3600351	R	PFAM: oxidoreductase/nitrogenase, component 1; KEGG: cac:CAC0259 fusion nifN/K+nifB (nifN-nitrogenase iron molybdenum cofactor biosinthesis protein, nifK-nitrogenase molibdenum-iron protein beta chain, nifB-nitrogenase iron-molibdenum cofactor biosynthesis protein); nitrogenase	complement(3598984..3600351)	Alkaliphilus metalliredigens QYMF	5313598
YP_001321305.1	CDS	Amet_3519	NC_009633.1	3600341	3601714	R	TIGRFAM: nitrogenase MoFe cofactor biosynthesis protein NifE; PFAM: oxidoreductase/nitrogenase, component 1; KEGG: cac:CAC0258 nitrogenase iron-molibdenum cofactor biosinthesis protein, gene nifE; nitrogenase MoFe cofactor biosynthesis protein NifE	complement(3600341..3601714)	Alkaliphilus metalliredigens QYMF	5313599
YP_001321306.1	CDS	Amet_3520	NC_009633.1	3601784	3603148	R	TIGRFAM: nitrogenase molybdenum-iron protein beta chain; PFAM: oxidoreductase/nitrogenase, component 1; KEGG: cac:CAC0257 nitrogenase molibdenum-iron protein, beta chain, gene nifK; nitrogenase molybdenum-iron protein subunit beta	complement(3601784..3603148)	Alkaliphilus metalliredigens QYMF	5313600
YP_001321307.1	CDS	Amet_3521	NC_009633.1	3603142	3604746	R	TIGRFAM: nitrogenase molybdenum-iron protein alpha chain; nitrogenase component I, alpha chain; PFAM: oxidoreductase/nitrogenase, component 1; KEGG: cac:CAC0256 nitrogenase molybdenum-iron protein, alpha chain (nitrogenase component I) gene nifD; nitrogenase molybdenum-iron protein subunit alpha	complement(3603142..3604746)	Alkaliphilus metalliredigens QYMF	5313601
YP_001321308.1	CDS	Amet_3522	NC_009633.1	3604771	3605154	R	PFAM: nitrogen regulatory protein P-II; KEGG: cac:CAC0255 nitrogen regulatory protein PII (nitrogen fixation nifHD); nitrogen regulatory protein P-II	complement(3604771..3605154)	Alkaliphilus metalliredigens QYMF	5313602
YP_001321309.1	CDS	Amet_3523	NC_009633.1	3605168	3605494	R	PFAM: nitrogen regulatory protein P-II; KEGG: cac:CAC0254 nitrogen regulatory protein PII (nitrogen fixation nifHD); nitrogen regulatory protein P-II	complement(3605168..3605494)	Alkaliphilus metalliredigens QYMF	5313603
YP_001321310.1	CDS	Amet_3524	NC_009633.1	3605581	3606399	R	TIGRFAM: nitrogenase iron protein; PFAM: NifH/frxC-family protein; KEGG: cac:CAC0253 nitrogenase iron protein (nitrogenase component II) gene nifH; nitrogenase iron protein	complement(3605581..3606399)	Alkaliphilus metalliredigens QYMF	5313604
YP_001321311.1	CDS	Amet_3525	NC_009633.1	3606511	3606663	R	hypothetical protein	complement(3606511..3606663)	Alkaliphilus metalliredigens QYMF	5313605
YP_001321312.1	CDS	Amet_3527	NC_009633.1	3607247	3607765	R	hypothetical protein	complement(3607247..3607765)	Alkaliphilus metalliredigens QYMF	5313607
YP_001321313.1	CDS	Amet_3528	NC_009633.1	3607750	3608598	R	hypothetical protein	complement(3607750..3608598)	Alkaliphilus metalliredigens QYMF	5313608
YP_001321314.1	CDS	Amet_3529	NC_009633.1	3608768	3609892	D	hypothetical protein	3608768..3609892	Alkaliphilus metalliredigens QYMF	5313609
YP_001321315.1	CDS	Amet_3530	NC_009633.1	3609912	3610748	D	hypothetical protein	3609912..3610748	Alkaliphilus metalliredigens QYMF	5313610
YP_001321316.1	CDS	Amet_3531	NC_009633.1	3611040	3612287	R	TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: oih:OB0241 C4-dicarboxylate transport system permease large protein; TRAP dicarboxylate transporter subunit DctM	complement(3611040..3612287)	Alkaliphilus metalliredigens QYMF	5313611
YP_001321317.1	CDS	Amet_3532	NC_009633.1	3612288	3612782	R	PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: dsy:DSY4744 hypothetical protein; tripartite ATP-independent periplasmic transporter DctQ	complement(3612288..3612782)	Alkaliphilus metalliredigens QYMF	5313612
YP_001321318.1	CDS	Amet_3533	NC_009633.1	3612849	3613868	R	TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: bha:BH2673 C4-dicarboxylate transport system (C4-dicarboxylate-binding protein); TRAP dicarboxylate transporter subunit DctP	complement(3612849..3613868)	Alkaliphilus metalliredigens QYMF	5313613
YP_001321319.1	CDS	Amet_3534	NC_009633.1	3613918	3615582	R	catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase	complement(3613918..3615582)	Alkaliphilus metalliredigens QYMF	5313614
YP_001321320.1	CDS	Amet_3535	NC_009633.1	3615728	3616465	R	PFAM: helix-turn-helix- domain containing protein, AraC type; response regulator receiver; KEGG: cno:NT01CX_0496 two-component response regulator; response regulator receiver protein	complement(3615728..3616465)	Alkaliphilus metalliredigens QYMF	5313615
YP_001321321.1	CDS	Amet_3536	NC_009633.1	3616462	3618063	R	PFAM: ATP-binding region, ATPase domain protein; histidine kinase internal region; Cupin 2, conserved barrel domain protein; KEGG: cpf:CPF_1171 sensor histidine kinase; histidine kinase	complement(3616462..3618063)	Alkaliphilus metalliredigens QYMF	5313616
YP_001321322.1	CDS	Amet_3537	NC_009633.1	3618369	3626900	R	PFAM: putative carbohydrate binding; glycosyltransferase 36; glycosyltransferase 36 associated; KEGG: cth:Cthe_1221 glycosyltransferase 36; glycosyltransferase	complement(3618369..3626900)	Alkaliphilus metalliredigens QYMF	5313617
YP_001321323.1	CDS	Amet_3538	NC_009633.1	3626938	3629415	R	PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; KEGG: cth:Cthe_1079 nucleotidyl transferase; nucleotidyl transferase	complement(3626938..3629415)	Alkaliphilus metalliredigens QYMF	5313618
YP_001321324.1	CDS	Amet_3539	NC_009633.1	3629577	3634424	R	PFAM: S-layer domain protein; peptidase M20; peptidase M28; KEGG: bha:BH3865 hypothetical protein; peptidase M28	complement(3629577..3634424)	Alkaliphilus metalliredigens QYMF	5313619
YP_001321325.1	CDS	Amet_3540	NC_009633.1	3634602	3634982	R	hypothetical protein	complement(3634602..3634982)	Alkaliphilus metalliredigens QYMF	5313620
YP_001321326.1	CDS	Amet_3541	NC_009633.1	3635328	3637109	R	KEGG: bce:BC0624 von Willebrand factor type A domain protein; nitric oxide reductase activation protein-like protein	complement(3635328..3637109)	Alkaliphilus metalliredigens QYMF	5313621
YP_001321327.1	CDS	Amet_3542	NC_009633.1	3637122	3638045	R	PFAM: ATPase associated with various cellular activities, AAA_5; KEGG: bld:BLi02262 YojN; ATPase	complement(3637122..3638045)	Alkaliphilus metalliredigens QYMF	5313622
YP_001321328.1	CDS	Amet_3543	NC_009633.1	3638330	3638746	R	KEGG: dsy:DSY0092 hypothetical protein; metal ion ABC transporter periplasmic component/surface adhesin-like protein	complement(3638330..3638746)	Alkaliphilus metalliredigens QYMF	5313623
YP_001321329.1	CDS	Amet_3544	NC_009633.1	3638765	3638986	R	hypothetical protein	complement(3638765..3638986)	Alkaliphilus metalliredigens QYMF	5313624
YP_001321330.1	CDS	Amet_3545	NC_009633.1	3639147	3639977	R	TIGRFAM: histidinol phosphate phosphatase HisJ family; PFAM: PHP C-terminal domain protein; SMART: phosphoesterase PHP domain protein; KEGG: dsy:DSY1025 hypothetical protein; HisJ family histidinol phosphate phosphatase	complement(3639147..3639977)	Alkaliphilus metalliredigens QYMF	5313625
YP_001321331.1	CDS	Amet_3546	NC_009633.1	3640375	3641481	D	KEGG: mta:Moth_1442 hypothetical protein; hypothetical protein	3640375..3641481	Alkaliphilus metalliredigens QYMF	5313626
YP_001321332.1	CDS	Amet_3547	NC_009633.1	3641474	3641686	D	PFAM: SirA family protein; KEGG: gsu:GSU2521 hypothetical protein; SirA family protein	3641474..3641686	Alkaliphilus metalliredigens QYMF	5313627
YP_001321333.1	CDS	Amet_3548	NC_009633.1	3641687	3641971	D	KEGG: chy:CHY_0235 hypothetical protein; hypothetical protein	3641687..3641971	Alkaliphilus metalliredigens QYMF	5313628
YP_001321334.1	CDS	Amet_3551	NC_009633.1	3642591	3644513	R	PFAM: protein of unknown function DUF214; KEGG: bld:BLi04210 similar to ABC transporter (permease); RBL02069; hypothetical protein	complement(3642591..3644513)	Alkaliphilus metalliredigens QYMF	5313631
YP_001321335.1	CDS	Amet_3552	NC_009633.1	3644510	3645289	R	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: oih:OB0833 ABC transporter ATP-binding protein; ABC transporter-like protein	complement(3644510..3645289)	Alkaliphilus metalliredigens QYMF	5313632
YP_001321336.1	CDS	Amet_3553	NC_009633.1	3645322	3647229	R	PFAM: protein of unknown function DUF214; KEGG: ctc:pE88_26 ABC transporter-associated permease; hypothetical protein	complement(3645322..3647229)	Alkaliphilus metalliredigens QYMF	5313633
YP_001321337.1	CDS	Amet_3554	NC_009633.1	3647219	3647974	R	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ctc:pE88_25 ABC transporter ATP-binding protein; ABC transporter-like protein	complement(3647219..3647974)	Alkaliphilus metalliredigens QYMF	5313634
YP_001321338.1	CDS	Amet_3555	NC_009633.1	3648107	3649075	R	PFAM: ATP-binding region, ATPase domain protein; KEGG: ctc:pE88_23 two-component sensor histidine kinase; integral membrane sensor signal transduction histidine kinase	complement(3648107..3649075)	Alkaliphilus metalliredigens QYMF	5313635
YP_001321339.1	CDS	Amet_3556	NC_009633.1	3649076	3649765	R	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ctc:pE88_22 two-component response regulator; two component transcriptional regulator	complement(3649076..3649765)	Alkaliphilus metalliredigens QYMF	5313636
YP_001321340.1	CDS	Amet_3559	NC_009633.1	3650842	3651051	R	hypothetical protein	complement(3650842..3651051)	Alkaliphilus metalliredigens QYMF	5313639
YP_001321341.1	CDS	Amet_3560	NC_009633.1	3651055	3651798	R	PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: dsy:DSY0836 hypothetical protein; IstB ATP binding domain-containing protein	complement(3651055..3651798)	Alkaliphilus metalliredigens QYMF	5313640
YP_001321342.1	CDS	Amet_3561	NC_009633.1	3651786	3653339	R	PFAM: Integrase, catalytic region; KEGG: bha:BH3965 transposase (22); integrase catalytic subunit	complement(3651786..3653339)	Alkaliphilus metalliredigens QYMF	5313641
YP_001321343.1	CDS	Amet_3562	NC_009633.1	3653409	3653855	R	hypothetical protein	complement(3653409..3653855)	Alkaliphilus metalliredigens QYMF	5313642
YP_001321344.1	CDS	Amet_3563	NC_009633.1	3654005	3654748	D	PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: fnu:FN0219 autolysin response regulator; LytTR family two component transcriptional regulator	3654005..3654748	Alkaliphilus metalliredigens QYMF	5313643
YP_001321345.1	CDS	Amet_3564	NC_009633.1	3654801	3655115	R	hypothetical protein	complement(3654801..3655115)	Alkaliphilus metalliredigens QYMF	5313644
YP_001321346.1	CDS	Amet_3565	NC_009633.1	3655278	3656060	R	KEGG: cth:Cthe_2966 hypothetical protein; hypothetical protein	complement(3655278..3656060)	Alkaliphilus metalliredigens QYMF	5313645
YP_001321347.1	CDS	Amet_3566	NC_009633.1	3656109	3656429	R	hypothetical protein	complement(3656109..3656429)	Alkaliphilus metalliredigens QYMF	5313646
YP_001321348.1	CDS	Amet_3567	NC_009633.1	3656573	3657844	D	PFAM: ATP-binding region, ATPase domain protein; KEGG: dsy:DSY2529 hypothetical protein; signal transduction histidine kinase regulating citrate/malate metabolism	3656573..3657844	Alkaliphilus metalliredigens QYMF	5313647
YP_001321349.1	CDS	Amet_3568	NC_009633.1	3657933	3659222	D	PFAM: ATP-binding region, ATPase domain protein; KEGG: dsy:DSY2529 hypothetical protein; signal transduction histidine kinase regulating citrate/malate metabolism	3657933..3659222	Alkaliphilus metalliredigens QYMF	5313648
YP_001321350.1	CDS	Amet_3569	NC_009633.1	3659395	3659550	R	hypothetical protein	complement(3659395..3659550)	Alkaliphilus metalliredigens QYMF	5313649
YP_001321351.1	CDS	smpB	NC_009633.1	3660261	3660734	R	binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein	complement(3660261..3660734)	Alkaliphilus metalliredigens QYMF	5313651
YP_001321352.1	CDS	Amet_3571	NC_009633.1	3660841	3661527	R	PFAM: TrkA-C domain protein; KEGG: cpr:CPR_0508 TrkA domain protein; TrkA domain-containing protein	complement(3660841..3661527)	Alkaliphilus metalliredigens QYMF	5313652
YP_001321353.1	CDS	Amet_3572	NC_009633.1	3661670	3663790	R	KEGG: cac:CAC0715 fusion ribonuclease and ribosomal protein S1 domain; TIGRFAM: VacB and RNase II family 3'-5' exoribonuclease; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; Ribonuclease B, OB region N-terminal domain; SMART: Cold shock protein; ribonuclease R	complement(3661670..3663790)	Alkaliphilus metalliredigens QYMF	5313653
YP_001321354.1	CDS	Amet_3573	NC_009633.1	3664091	3664402	R	PFAM: protein of unknown function DUF1294; KEGG: btk:BT9727_3318 hypothetical protein; hypothetical protein	complement(3664091..3664402)	Alkaliphilus metalliredigens QYMF	5313654
YP_001321355.1	CDS	hppA	NC_009633.1	3664513	3666528	R	pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient; membrane-bound proton-translocating pyrophosphatase	complement(3664513..3666528)	Alkaliphilus metalliredigens QYMF	5313655
YP_001321356.1	CDS	Amet_3575	NC_009633.1	3666598	3666831	R	TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: swo:Swol_0277 preprotein translocase, SecG subunit; preprotein translocase subunit SecG	complement(3666598..3666831)	Alkaliphilus metalliredigens QYMF	5313656
YP_001321357.1	CDS	eno	NC_009633.1	3667103	3668395	R	enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase	complement(3667103..3668395)	Alkaliphilus metalliredigens QYMF	5313657
YP_001321358.1	CDS	Amet_3577	NC_009633.1	3668422	3669957	R	catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase	complement(3668422..3669957)	Alkaliphilus metalliredigens QYMF	5313658
YP_001321359.1	CDS	tpiA	NC_009633.1	3669972	3670718	R	Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase	complement(3669972..3670718)	Alkaliphilus metalliredigens QYMF	5313659
YP_001321360.1	CDS	Amet_3579	NC_009633.1	3670731	3671930	R	PFAM: phosphoglycerate kinase; KEGG: cth:Cthe_0138 phosphoglycerate kinase; phosphoglycerate kinase	complement(3670731..3671930)	Alkaliphilus metalliredigens QYMF	5313660
YP_001321361.1	CDS	Amet_3580	NC_009633.1	3672071	3673081	R	TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; KEGG: chy:CHY_0280 glyceraldehyde-3-phosphate dehydrogenase, type I; glyceraldehyde-3-phosphate dehydrogenase, type I	complement(3672071..3673081)	Alkaliphilus metalliredigens QYMF	5313661
YP_001321362.1	CDS	Amet_3581	NC_009633.1	3673117	3674145	R	PFAM: putative sugar-binding domain protein; KEGG: tte:TTE1763 Transcriptional regulator, contains sigma factor-related N-terminal domain; DeoR family transcriptional regulator	complement(3673117..3674145)	Alkaliphilus metalliredigens QYMF	5313662
YP_001321363.1	CDS	Amet_3582	NC_009633.1	3674390	3675778	R	TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor; sigma-54 factor, core-binding region; sigma-54, DNA-binding domain protein; KEGG: dsy:DSY4842 hypothetical protein; RNA polymerase sigma-54 subunit RpoN	complement(3674390..3675778)	Alkaliphilus metalliredigens QYMF	5313663
YP_001321364.1	CDS	Amet_3583	NC_009633.1	3676024	3676968	R	PFAM: inner-membrane translocator; KEGG: tpa:TP0323 putative simple sugar transport system permease protein; inner-membrane translocator	complement(3676024..3676968)	Alkaliphilus metalliredigens QYMF	5313664
YP_001321365.1	CDS	Amet_3584	NC_009633.1	3676968	3678077	R	PFAM: inner-membrane translocator; KEGG: tpa:TP0322 putative simple sugar transport system permease protein; inner-membrane translocator	complement(3676968..3678077)	Alkaliphilus metalliredigens QYMF	5313665
YP_001321366.1	CDS	Amet_3585	NC_009633.1	3678070	3679605	R	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cpf:CPF_1831 ABC transporter, ATP-binding protein; ABC transporter-like protein	complement(3678070..3679605)	Alkaliphilus metalliredigens QYMF	5313666
YP_001321367.1	CDS	Amet_3586	NC_009633.1	3679623	3680351	R	PFAM: Radical SAM domain protein; KEGG: hin:HI0520 hypothetical protein; radical SAM domain-containing protein	complement(3679623..3680351)	Alkaliphilus metalliredigens QYMF	5313667
YP_001321368.1	CDS	Amet_3587	NC_009633.1	3680356	3681873	R	KEGG: hin:HI0521 hypothetical protein; hypothetical protein	complement(3680356..3681873)	Alkaliphilus metalliredigens QYMF	5313668
YP_001321369.1	CDS	Amet_3588	NC_009633.1	3681969	3683057	R	PFAM: basic membrane lipoprotein; KEGG: tpa:TP0319 putative simple sugar transport system substrate-binding protein; basic membrane lipoprotein	complement(3681969..3683057)	Alkaliphilus metalliredigens QYMF	5313669
YP_001321370.1	CDS	Amet_3589	NC_009633.1	3683318	3684511	R	PFAM: fatty acid synthesis plsX protein; KEGG: tte:TTE1874 fatty acid/phospholipid biosynthesis enzyme; glycine reductase	complement(3683318..3684511)	Alkaliphilus metalliredigens QYMF	5313670
YP_001321371.1	CDS	Amet_3590	NC_009633.1	3684524	3686065	R	PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: tte:TTE1875 3-oxoacyl-(acyl-carrier-protein) synthase III; betaine reductase	complement(3684524..3686065)	Alkaliphilus metalliredigens QYMF	5313671
YP_001321372.1	CDS	Amet_3591	NC_009633.1	3686224	3687534	R	KEGG: chy:CHY_2393 glycine reductase, selenoprotein B; Contains selenocysteine; TIGRFAM: glycine reductase, selenoprotein B; selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family; PFAM: Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase; selenoprotein B	complement(3686224..3687534)	Alkaliphilus metalliredigens QYMF	5313672
YP_001321373.1	CDS	Amet_3592	NC_009633.1	3687588	3688064	R	GrdA accepts a carboxymethylselenoether from protein B and transfers it to protein C forming a protein C-bound acetyl-thioester; oxidized GrdA is then reduced by thioredoxin; glycine/sarcosine/betaine reductase complex protein A	complement(3687588..3688064)	Alkaliphilus metalliredigens QYMF	5313673
YP_001321374.1	CDS	Amet_3593	NC_009633.1	3688157	3689443	R	PFAM: Glycine/sarcosine/betaine reductase complex, protein B, alpha and beta subunits; KEGG: tte:TTE1879 GrdE proprotein; sarcosine reductase	complement(3688157..3689443)	Alkaliphilus metalliredigens QYMF	5313674
YP_001321375.1	CDS	Amet_3594	NC_009633.1	3689510	3689827	R	PFAM: Thioredoxin domain; KEGG: tte:TTE1880 Thiol-disulfide isomerase and thioredoxins; thioredoxin domain-containing protein	complement(3689510..3689827)	Alkaliphilus metalliredigens QYMF	5313675
YP_001321376.1	CDS	Amet_3595	NC_009633.1	3689935	3690882	R	TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; FAD dependent oxidoreductase; KEGG: tte:TTE1881 thioredoxin reductase; thioredoxin reductase	complement(3689935..3690882)	Alkaliphilus metalliredigens QYMF	5313676
YP_001321377.1	CDS	Amet_3596	NC_009633.1	3690959	3691342	R	KEGG: tte:TTE1882 GrdX protein; GrdX protein	complement(3690959..3691342)	Alkaliphilus metalliredigens QYMF	5313677
YP_001321378.1	CDS	Amet_3597	NC_009633.1	3691982	3692833	R	TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: cno:NT01CX_0894 DegV family protein; DegV family protein	complement(3691982..3692833)	Alkaliphilus metalliredigens QYMF	5313678
YP_001321379.1	CDS	Amet_3598	NC_009633.1	3693002	3693499	R	PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: tte:TTE0253 predicted rRNA methylase (SpoU class); tRNA/rRNA methyltransferase SpoU	complement(3693002..3693499)	Alkaliphilus metalliredigens QYMF	5313679
YP_001321380.1	CDS	Amet_3599	NC_009633.1	3693643	3694725	R	hypothetical protein	complement(3693643..3694725)	Alkaliphilus metalliredigens QYMF	5313680
YP_001321381.1	CDS	Amet_3600	NC_009633.1	3694979	3695455	D	KEGG: cac:CAC0787 uncharacterized conserved protein, repeats; hypothetical protein	3694979..3695455	Alkaliphilus metalliredigens QYMF	5313681
YP_001321382.1	CDS	Amet_3601	NC_009633.1	3695548	3695847	D	KEGG: cac:CAC0786 uncharacterized conserved protein, repeats; hypothetical protein	3695548..3695847	Alkaliphilus metalliredigens QYMF	5313682
YP_001321383.1	CDS	Amet_3602	NC_009633.1	3695925	3696980	R	PFAM: Semialdehyde dehydrogenase, NAD - binding; oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: bat:BAS3390 oxidoreductase, Gfo/Idh/MocA family; oxidoreductase domain-containing protein	complement(3695925..3696980)	Alkaliphilus metalliredigens QYMF	5313683
YP_001321384.1	CDS	Amet_3603	NC_009633.1	3697111	3698358	R	PFAM: uncharacterised conserved protein UCP033563; KEGG: cac:CAC0016 related to HTH domain of SpoOJ/ParA/ParB/repB family, involved in chromosome partitioning; hypothetical protein	complement(3697111..3698358)	Alkaliphilus metalliredigens QYMF	5313684
YP_001321385.1	CDS	Amet_3604	NC_009633.1	3698427	3699341	R	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: cac:CAC0015 D-3-phosphoglycerate dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase	complement(3698427..3699341)	Alkaliphilus metalliredigens QYMF	5313685
YP_001321386.1	CDS	Amet_3605	NC_009633.1	3699355	3700425	R	PFAM: aminotransferase, class V; KEGG: cac:CAC0014 aminotransferase; alanine--glyoxylate transaminase	complement(3699355..3700425)	Alkaliphilus metalliredigens QYMF	5313686
YP_001321387.1	CDS	Amet_3606	NC_009633.1	3700928	3702157	D	catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase	3700928..3702157	Alkaliphilus metalliredigens QYMF	5313687
YP_001321388.1	CDS	Amet_3607	NC_009633.1	3702324	3703172	D	TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: sth:STH524 hypothetical protein; DegV family protein	3702324..3703172	Alkaliphilus metalliredigens QYMF	5313688
YP_001321389.1	CDS	Amet_3608	NC_009633.1	3703175	3704119	R	PFAM: protein of unknown function DUF362; KEGG: mma:MM1795 iron-sulfur cluster-binding protein; hypothetical protein	complement(3703175..3704119)	Alkaliphilus metalliredigens QYMF	5313689
YP_001321390.1	CDS	Amet_3609	NC_009633.1	3704344	3706533	R	PFAM: S-layer domain protein; metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: efa:EF0062 5'-nucleotidase family protein; 5'-nucleotidase domain-containing protein	complement(3704344..3706533)	Alkaliphilus metalliredigens QYMF	5313690
YP_001321391.1	CDS	Amet_3610	NC_009633.1	3706762	3708552	R	PFAM: Peptidoglycan-binding LysM; metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: bcl:ABC0966 nucleotidase; 5'-nucleotidase domain-containing protein	complement(3706762..3708552)	Alkaliphilus metalliredigens QYMF	5313691
YP_001321392.1	CDS	Amet_3611	NC_009633.1	3708760	3709923	R	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF362; KEGG: dsy:DSY4491 hypothetical protein; hypothetical protein	complement(3708760..3709923)	Alkaliphilus metalliredigens QYMF	5313692
YP_001321393.1	CDS	Amet_3612	NC_009633.1	3709945	3710769	R	TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase, type 3; KEGG: ctc:CTC00366 predicted hydrolase; cof family hydrolase	complement(3709945..3710769)	Alkaliphilus metalliredigens QYMF	5313693
YP_001321394.1	CDS	Amet_3613	NC_009633.1	3710898	3711305	D	PFAM: ferric-uptake regulator; KEGG: tte:TTE1767 Fe2+/Zn2+ uptake regulation proteins; ferric uptake regulator family protein	3710898..3711305	Alkaliphilus metalliredigens QYMF	5313694
YP_001321395.1	CDS	Amet_3614	NC_009633.1	3711553	3712632	R	cobalamin biosynthesis protein; decarboxylates L-threonine-O-3-phosphate to yield (R)-1-amino-2-propanol O-2-phosphate, the precursor for the linkage between the nucleotide loop and the corrin ring in cobalamin; structurally similar to histidinol phosphate aminotransferase; threonine-phosphate decarboxylase	complement(3711553..3712632)	Alkaliphilus metalliredigens QYMF	5313695
YP_001321396.1	CDS	Amet_3615	NC_009633.1	3712637	3713581	R	TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB; KEGG: cno:NT01CX_2082 cobalamin biosynthesis protein CobD; cobalamin biosynthesis protein CobD	complement(3712637..3713581)	Alkaliphilus metalliredigens QYMF	5313696
YP_001321397.1	CDS	Amet_3616	NC_009633.1	3713581	3715092	R	TIGRFAM: cobyric acid synthase CobQ; PFAM: Cobyrinic acid a,c-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: ctc:CTC00720 cobyric acid synthase cbiP; cobyric acid synthase CobQ	complement(3713581..3715092)	Alkaliphilus metalliredigens QYMF	5313697
YP_001321398.1	CDS	Amet_3617	NC_009633.1	3715111	3716367	R	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mla:Mlab_1378 hypothetical protein; ABC transporter-like protein	complement(3715111..3716367)	Alkaliphilus metalliredigens QYMF	5313698
YP_001321399.1	CDS	Amet_3618	NC_009633.1	3716384	3717424	R	PFAM: transport system permease protein; KEGG: ctc:CTC00784 iron(III) dicitrate transport system permease protein fecD; transport system permease	complement(3716384..3717424)	Alkaliphilus metalliredigens QYMF	5313699
YP_001321400.1	CDS	Amet_3619	NC_009633.1	3717535	3718518	R	PFAM: periplasmic binding protein; KEGG: sth:STH1929 iron ABC transporter substrate-binding protein; periplasmic binding protein	complement(3717535..3718518)	Alkaliphilus metalliredigens QYMF	5313700
YP_001321401.1	CDS	Amet_3620	NC_009633.1	3718535	3719140	R	PFAM: Phosphoglycerate mutase; KEGG: cth:Cthe_3153 phosphoglycerate mutase; phosphoglycerate mutase	complement(3718535..3719140)	Alkaliphilus metalliredigens QYMF	5313701
YP_001321402.1	CDS	Amet_3621	NC_009633.1	3719196	3719948	R	TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS; KEGG: cno:NT01CX_2079 cobalamin 5'-phosphate synthase; cobalamin 5'-phosphate synthase	complement(3719196..3719948)	Alkaliphilus metalliredigens QYMF	5313702
YP_001321403.1	CDS	Amet_3622	NC_009633.1	3719938	3720480	R	PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; KEGG: cth:Cthe_0965 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; ATP:corrinoid adenosyltransferase BtuR/CobO/CobP	complement(3719938..3720480)	Alkaliphilus metalliredigens QYMF	5313703
YP_001321404.1	CDS	Amet_3623	NC_009633.1	3720502	3721065	R	PFAM: cobalbumin biosynthesis protein; KEGG: cac:CAC1383 adenosyl cobinamide kinase/adenosyl cobinamide phosphate; adenosylcobinamide-phosphate guanylyltransferase	complement(3720502..3721065)	Alkaliphilus metalliredigens QYMF	5313704
YP_001321405.1	CDS	Amet_3624	NC_009633.1	3721419	3722744	R	KEGG: bca:BCE_1868 hypothetical protein; hypothetical protein	complement(3721419..3722744)	Alkaliphilus metalliredigens QYMF	5313705
YP_001321406.1	CDS	Amet_3625	NC_009633.1	3722813	3723505	R	KEGG: cth:Cthe_1061 hypothetical protein; hypothetical protein	complement(3722813..3723505)	Alkaliphilus metalliredigens QYMF	5313706
YP_001321407.1	CDS	Amet_3626	NC_009633.1	3723622	3725079	R	PFAM: VanW family protein; G5 domain protein; KEGG: tte:TTE1768 hypothetical protein; VanW family protein	complement(3723622..3725079)	Alkaliphilus metalliredigens QYMF	5313707
YP_001321408.1	CDS	Amet_3627	NC_009633.1	3725221	3727143	R	PFAM: cell division protein FtsA; KEGG: ctc:CTC00985 cell division protein FtsA; cell division protein FtsA	complement(3725221..3727143)	Alkaliphilus metalliredigens QYMF	5313708
YP_001321409.1	CDS	Amet_3628	NC_009633.1	3727241	3727891	R	KEGG: tte:TTE1769 predicted EndoIII-related endonuclease; TIGRFAM: endonuclease III; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; SMART: iron-sulfur cluster loop; endonuclease III	complement(3727241..3727891)	Alkaliphilus metalliredigens QYMF	5313709
YP_001321410.1	CDS	Amet_3629	NC_009633.1	3727926	3728207	R	PFAM: protein of unknown function DUF503; KEGG: cth:Cthe_0584 protein of unknown function DUF503; hypothetical protein	complement(3727926..3728207)	Alkaliphilus metalliredigens QYMF	5313710
YP_001321411.1	CDS	Amet_3630	NC_009633.1	3728314	3731397	R	PFAM: acriflavin resistance protein; KEGG: dsy:DSY3359 hypothetical protein; acriflavin resistance protein	complement(3728314..3731397)	Alkaliphilus metalliredigens QYMF	5313711
YP_001321412.1	CDS	Amet_3631	NC_009633.1	3731394	3732437	R	TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: dsy:DSY3360 hypothetical protein; RND family efflux transporter MFP subunit	complement(3731394..3732437)	Alkaliphilus metalliredigens QYMF	5313712
YP_001321413.1	CDS	Amet_3632	NC_009633.1	3732505	3733083	R	hypothetical protein	complement(3732505..3733083)	Alkaliphilus metalliredigens QYMF	5313713
YP_001321414.1	CDS	Amet_3633	NC_009633.1	3733334	3733855	R	TIGRFAM: signal peptidase I; PFAM: peptidase S24, S26A and S26B; KEGG: oih:OB1538 signal peptidase I; signal peptidase I	complement(3733334..3733855)	Alkaliphilus metalliredigens QYMF	5313714
YP_001321415.1	CDS	Amet_3634	NC_009633.1	3734177	3735364	R	TIGRFAM: 8-amino-7-oxononanoate synthase; pyridoxal phosphate-dependent acyltransferase, putative; PFAM: aminotransferase, class I and II; KEGG: tde:TDE2194 8-amino-7-oxononanoate synthase, putative; pyridoxal phosphate-dependent acyltransferase	complement(3734177..3735364)	Alkaliphilus metalliredigens QYMF	5313715
YP_001321416.1	CDS	Amet_3635	NC_009633.1	3735807	3738164	R	KEGG: tte:TTE1771 predicted ATP-dependent protease; ATP-dependent protease	complement(3735807..3738164)	Alkaliphilus metalliredigens QYMF	5313716
YP_001321417.1	CDS	Amet_3636	NC_009633.1	3738262	3739374	R	PFAM: HEAT domain containing protein; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; domain of unknown function DUF1730; KEGG: ser:SERP1392 iron-sulfur cluster-binding protein, putative; hypothetical protein	complement(3738262..3739374)	Alkaliphilus metalliredigens QYMF	5313717
YP_001321418.1	CDS	Amet_3637	NC_009633.1	3739464	3740003	R	TIGRFAM: signal peptidase I; PFAM: peptidase S24, S26A and S26B; KEGG: oih:OB1538 signal peptidase I; signal peptidase I	complement(3739464..3740003)	Alkaliphilus metalliredigens QYMF	5313718
YP_001321419.1	CDS	Amet_3638	NC_009633.1	3740094	3740519	D	PFAM: endodeoxyribonuclease RusA; KEGG: cno:NT01CX_0479 hypothetical protein; endodeoxyribonuclease RusA	3740094..3740519	Alkaliphilus metalliredigens QYMF	5313719
YP_001321420.1	CDS	Amet_3639	NC_009633.1	3740714	3741196	R	PFAM: protein of unknown function DUF456; KEGG: xoo:XOO1509 hypothetical protein; hypothetical protein	complement(3740714..3741196)	Alkaliphilus metalliredigens QYMF	5313720
YP_001321421.1	CDS	Amet_3640	NC_009633.1	3741295	3741873	R	PFAM: regulatory protein, ArsR; KEGG: cpr:CPR_1606 transcriptional regulatory protein, putative; regulatory protein ArsR	complement(3741295..3741873)	Alkaliphilus metalliredigens QYMF	5313721
YP_001321422.1	CDS	Amet_3641	NC_009633.1	3741979	3742830	R	PFAM: nitroreductase; KEGG: dsy:DSY1470 hypothetical protein; nitroreductase	complement(3741979..3742830)	Alkaliphilus metalliredigens QYMF	5313722
YP_001321423.1	CDS	Amet_3642	NC_009633.1	3742844	3743761	R	catalyzes the formation of glutamate from glutamine; glutaminase	complement(3742844..3743761)	Alkaliphilus metalliredigens QYMF	5313723
YP_001321424.1	CDS	Amet_3643	NC_009633.1	3743808	3745532	R	PFAM: phosphoribulokinase/uridine kinase; KEGG: cth:Cthe_0332 phosphoribulokinase/uridine kinase; phosphoribulokinase/uridine kinase	complement(3743808..3745532)	Alkaliphilus metalliredigens QYMF	5313724
YP_001321425.1	CDS	Amet_3644	NC_009633.1	3745612	3746046	R	PFAM: CBS domain containing protein; KEGG: cth:Cthe_2352 putative signal-transduction protein with CBS domains; signal-transduction protein	complement(3745612..3746046)	Alkaliphilus metalliredigens QYMF	5313725
YP_001321426.1	CDS	Amet_3645	NC_009633.1	3746141	3746935	R	TIGRFAM: glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: tte:TTE1277 glutamate 5-kinase; glutamate 5-kinase	complement(3746141..3746935)	Alkaliphilus metalliredigens QYMF	5313726
YP_001321427.1	CDS	proA	NC_009633.1	3746944	3748188	R	Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase	complement(3746944..3748188)	Alkaliphilus metalliredigens QYMF	5313727
YP_001321428.1	CDS	Amet_3647	NC_009633.1	3748602	3749135	R	TIGRFAM: signal peptidase I; PFAM: peptidase S24, S26A and S26B; KEGG: ctc:CTC01253 putative signal peptidase I; signal peptidase I	complement(3748602..3749135)	Alkaliphilus metalliredigens QYMF	5313728
YP_001321429.1	CDS	Amet_3648	NC_009633.1	3749257	3749613	R	KEGG: bce:BC4676 hypothetical cytosolic protein; hypothetical protein	complement(3749257..3749613)	Alkaliphilus metalliredigens QYMF	5313729
YP_001321430.1	CDS	Amet_3649	NC_009633.1	3749860	3750438	D	hypothetical protein	3749860..3750438	Alkaliphilus metalliredigens QYMF	5313730
YP_001321431.1	CDS	Amet_3650	NC_009633.1	3750620	3751285	R	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: cno:NT01CX_1005 HAD-superfamily hydrolase, putative; HAD family hydrolase	complement(3750620..3751285)	Alkaliphilus metalliredigens QYMF	5313731
YP_001321432.1	CDS	Amet_3651	NC_009633.1	3751375	3752082	R	KEGG: cno:NT01CX_1222 hypothetical protein; hypothetical protein	complement(3751375..3752082)	Alkaliphilus metalliredigens QYMF	5313732
YP_001321433.1	CDS	Amet_3652	NC_009633.1	3752163	3752747	R	PFAM: NAD(P)H dehydrogenase (quinone); KEGG: bca:BCE_5095 NAD(P)H dehydrogenase, quinone family; NAD(P)H dehydrogenase (quinone)	complement(3752163..3752747)	Alkaliphilus metalliredigens QYMF	5313733
YP_001321434.1	CDS	Amet_3653	NC_009633.1	3752955	3753527	R	PFAM: manganese containing catalase; KEGG: ctc:CTC00870 spore coat protein; manganese containing catalase	complement(3752955..3753527)	Alkaliphilus metalliredigens QYMF	5313734
YP_001321435.1	CDS	Amet_3654	NC_009633.1	3753548	3753814	R	KEGG: tte:TTE1800 spore coat peptide assembly protein cotJB; spore coat peptide assembly protein cotJB	complement(3753548..3753814)	Alkaliphilus metalliredigens QYMF	5313735
YP_001321436.1	CDS	Amet_3655	NC_009633.1	3753814	3754041	R	hypothetical protein	complement(3753814..3754041)	Alkaliphilus metalliredigens QYMF	5313736
YP_001321437.1	CDS	Amet_3656	NC_009633.1	3754278	3754796	R	PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; KEGG: cno:NT01CX_0653 peptidyl-prolyl cis-trans isomerase; cyclophilin type peptidyl-prolyl cis-trans isomerase	complement(3754278..3754796)	Alkaliphilus metalliredigens QYMF	5313737
YP_001321438.1	CDS	Amet_3657	NC_009633.1	3755037	3755879	R	PFAM: GCN5-related N-acetyltransferase; KEGG: bsu:BG13543 hypothetical protein; N-acetyltransferase GCN5	complement(3755037..3755879)	Alkaliphilus metalliredigens QYMF	5313738
YP_001321439.1	CDS	mnmA	NC_009633.1	3756441	3757550	R	catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA	complement(3756441..3757550)	Alkaliphilus metalliredigens QYMF	5313739
YP_001321440.1	CDS	Amet_3659	NC_009633.1	3757899	3758624	R	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: lin:lin2353 similar to amino acid ABC transporter (ATP-binding protein); ABC transporter-like protein	complement(3757899..3758624)	Alkaliphilus metalliredigens QYMF	5313740
YP_001321441.1	CDS	Amet_3660	NC_009633.1	3758629	3759312	R	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dde:Dde_3743 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; polar amino acid ABC transporter inner membrane subunit	complement(3758629..3759312)	Alkaliphilus metalliredigens QYMF	5313741
YP_001321442.1	CDS	Amet_3661	NC_009633.1	3759395	3760237	R	PFAM: extracellular solute-binding protein, family 3; KEGG: bat:BAS0353 amino acid ABC transporter, solute binding protein; extracellular solute-binding protein	complement(3759395..3760237)	Alkaliphilus metalliredigens QYMF	5313742
YP_001321443.1	CDS	Amet_3662	NC_009633.1	3760680	3761798	D	PFAM: NLP/P60 protein; protein of unknown function DUF1058; SH3, type 3 domain protein; SMART: SH3 domain protein; KEGG: tte:TTE0880 cell wall-associated hydrolase (invasion-associated proteins); NLP/P60 protein	3760680..3761798	Alkaliphilus metalliredigens QYMF	5313743
YP_001321444.1	CDS	Amet_3663	NC_009633.1	3762312	3762662	R	hypothetical protein	complement(3762312..3762662)	Alkaliphilus metalliredigens QYMF	5313744
YP_001321445.1	CDS	Amet_3665	NC_009633.1	3763130	3764767	D	KEGG: cac:CAC0367 arginine degradation protein (gene RocB); arginine degradation protein RocB	3763130..3764767	Alkaliphilus metalliredigens QYMF	5313746
YP_001321446.1	CDS	Amet_3667	NC_009633.1	3764939	3765376	R	hypothetical protein	complement(3764939..3765376)	Alkaliphilus metalliredigens QYMF	5313748
YP_001321447.1	CDS	Amet_3668	NC_009633.1	3765724	3766119	R	KEGG: tte:TTE0912 hypothetical protein; hypothetical protein	complement(3765724..3766119)	Alkaliphilus metalliredigens QYMF	5313749
YP_001321448.1	CDS	Amet_3669	NC_009633.1	3766236	3768431	R	PFAM: S-layer domain protein; protein of unknown function DUF187; KEGG: cth:Cthe_0054 protein of unknown function DUF187; hypothetical protein	complement(3766236..3768431)	Alkaliphilus metalliredigens QYMF	5313750
YP_001321449.1	CDS	Amet_3670	NC_009633.1	3768799	3768957	R	hypothetical protein	complement(3768799..3768957)	Alkaliphilus metalliredigens QYMF	5313751
YP_001321450.1	CDS	Amet_3671	NC_009633.1	3769231	3770586	R	TIGRFAM: RNA methyltransferase, TrmA family; PFAM: putative RNA methylase; deoxyribonuclease/rho motif-related TRAM; (Uracil-5)-methyltransferase; KEGG: ctc:CTC01941 tRNA (uracil-5-) -methyltransferase; RNA methyltransferase	complement(3769231..3770586)	Alkaliphilus metalliredigens QYMF	5313752
YP_001321451.1	CDS	Amet_3672	NC_009633.1	3770598	3771329	R	PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: bce:BC4704 ribosomal small subunit pseudouridine synthase A; pseudouridine synthase	complement(3770598..3771329)	Alkaliphilus metalliredigens QYMF	5313753
YP_001321452.1	CDS	Amet_3673	NC_009633.1	3771409	3771960	R	KEGG: cth:Cthe_0084 hypothetical protein; hypothetical protein	complement(3771409..3771960)	Alkaliphilus metalliredigens QYMF	5313754
YP_001321453.1	CDS	Amet_3674	NC_009633.1	3772058	3772573	R	TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: cno:NT01CX_1384 CDP-diacylglycerol--serine O-phosphatidyltransferase; CDP-diacylglycerol--serine O-phosphatidyltransferase	complement(3772058..3772573)	Alkaliphilus metalliredigens QYMF	5313755
YP_001321454.1	CDS	Amet_3675	NC_009633.1	3773080	3774009	D	TIGRFAM: ketose-bisphosphate aldolase; fructose-1,6-bisphosphate aldolase, class II; PFAM: ketose-bisphosphate aldolase, class-II; KEGG: cth:Cthe_0349 fructose-1,6-bisphosphate aldolase, class II; fructose-1,6-bisphosphate aldolase	3773080..3774009	Alkaliphilus metalliredigens QYMF	5313756
YP_001321455.1	CDS	Amet_3676	NC_009633.1	3774132	3775271	D	KEGG: uur:UU520 hypothetical protein; hypothetical protein	3774132..3775271	Alkaliphilus metalliredigens QYMF	5313757
YP_001321456.1	CDS	Amet_3677	NC_009633.1	3775291	3775980	R	PFAM: metallophosphoesterase; KEGG: cno:NT01CX_1367 predicted phoshohydrolase; metallophosphoesterase	complement(3775291..3775980)	Alkaliphilus metalliredigens QYMF	5313758
YP_001321457.1	CDS	Amet_3678	NC_009633.1	3776007	3776810	R	PFAM: RelA/SpoT domain protein; KEGG: ctc:CTC00336 GTP pyrophosphokinase; RelA/SpoT domain-containing protein	complement(3776007..3776810)	Alkaliphilus metalliredigens QYMF	5313759
YP_001321458.1	CDS	Amet_3679	NC_009633.1	3777114	3778127	R	TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; KEGG: chy:CHY_0280 glyceraldehyde-3-phosphate dehydrogenase, type I; glyceraldehyde-3-phosphate dehydrogenase, type I	complement(3777114..3778127)	Alkaliphilus metalliredigens QYMF	5313760
YP_001321459.1	CDS	Amet_3680	NC_009633.1	3778507	3778731	D	Contains selenocysteine; TIGRFAM: conserved hypothetical selenoprotein; KEGG: mfa:Mfla_0384 SelT/SelW/SelH selenoprotein; putative selenoprotein	3778507..3778731	Alkaliphilus metalliredigens QYMF	5313761
YP_001321460.1	CDS	Amet_3681	NC_009633.1	3778753	3779172	R	KEGG: cno:NT01CX_1363 hypothetical protein; hypothetical protein	complement(3778753..3779172)	Alkaliphilus metalliredigens QYMF	5313762
YP_001321461.1	CDS	Amet_3682	NC_009633.1	3779271	3780218	R	TIGRFAM: conserved hypothetical radical SAM protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cth:Cthe_0370 conserved hypothetical radical SAM protein; putative radical SAM protein	complement(3779271..3780218)	Alkaliphilus metalliredigens QYMF	5313763
YP_001321462.1	CDS	Amet_3683	NC_009633.1	3780193	3781485	R	PFAM: major facilitator superfamily MFS_1; KEGG: dsy:DSY0432 hypothetical protein; major facilitator superfamily transporter	complement(3780193..3781485)	Alkaliphilus metalliredigens QYMF	5313764
YP_001321463.1	CDS	Amet_3684	NC_009633.1	3781549	3781953	R	KEGG: cth:Cthe_3089 UspA; hypothetical protein	complement(3781549..3781953)	Alkaliphilus metalliredigens QYMF	5313765
YP_001321464.1	CDS	Amet_3685	NC_009633.1	3782102	3783769	R	PFAM: S-layer domain protein; glycoside hydrolase, family 18; SMART: chitinase II; KEGG: swo:Swol_0141 hypothetical protein; glycoside hydrolase	complement(3782102..3783769)	Alkaliphilus metalliredigens QYMF	5313766
YP_001321465.1	CDS	Amet_3686	NC_009633.1	3784013	3784828	R	PFAM: Peptidoglycan-binding LysM; KEGG: mta:Moth_1271 peptidoglycan-binding LysM; peptidoglycan-binding protein LysM	complement(3784013..3784828)	Alkaliphilus metalliredigens QYMF	5313767
YP_001321466.1	CDS	Amet_3687	NC_009633.1	3784980	3785510	R	Contains selenocysteine; TIGRFAM: alkylhydroperoxidase like protein, AhpD family; uncharacterized peroxidase-related enzyme; PFAM: Carboxymuconolactone decarboxylase; KEGG: gvi:glr2368 hypothetical protein; alkylhydroperoxidase	complement(3784980..3785510)	Alkaliphilus metalliredigens QYMF	5313768
YP_001321467.1	CDS	Amet_3688	NC_009633.1	3785684	3785872	R	PFAM: protein of unknown function DUF378; KEGG: sth:STH346 hypothetical protein; hypothetical protein	complement(3785684..3785872)	Alkaliphilus metalliredigens QYMF	5313769
YP_001321468.1	CDS	Amet_3689	NC_009633.1	3785986	3786360	R	hypothetical protein	complement(3785986..3786360)	Alkaliphilus metalliredigens QYMF	5313770
YP_001321469.1	CDS	Amet_3690	NC_009633.1	3786452	3787393	R	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: cac:CAC0365 phosphoglycerate dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase	complement(3786452..3787393)	Alkaliphilus metalliredigens QYMF	5313771
YP_001321470.1	CDS	Amet_3691	NC_009633.1	3787627	3788109	D	KEGG: cno:NT01CX_0854 hypothetical protein; putative metal dependent phosphohydrolase	3787627..3788109	Alkaliphilus metalliredigens QYMF	5313772
YP_001321471.1	CDS	Amet_3692	NC_009633.1	3788203	3789813	R	TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor, GTP-binding; elongation factor Tu, domain 2 protein; KEGG: cth:Cthe_0328 peptide chain release factor 3; peptide chain release factor 3	complement(3788203..3789813)	Alkaliphilus metalliredigens QYMF	5313773
YP_001321472.1	CDS	Amet_3693	NC_009633.1	3789996	3790517	R	KEGG: tte:TTE0937 hypothetical protein; hypothetical protein	complement(3789996..3790517)	Alkaliphilus metalliredigens QYMF	5313774
YP_001321473.1	CDS	Amet_3694	NC_009633.1	3790733	3791680	R	PFAM: protein of unknown function DUF6, transmembrane; KEGG: tte:TTE2399 permeases of the drug/metabolite transporter (DMT) superfamily; hypothetical protein	complement(3790733..3791680)	Alkaliphilus metalliredigens QYMF	5313775
YP_001321474.1	CDS	Amet_3695	NC_009633.1	3791798	3792301	R	KEGG: cac:CAC3417 flavodoxin; flavodoxin	complement(3791798..3792301)	Alkaliphilus metalliredigens QYMF	5313776
YP_001321475.1	CDS	Amet_3696	NC_009633.1	3792339	3792908	R	PFAM: nitroreductase; KEGG: cth:Cthe_0579 nitroreductase; nitroreductase	complement(3792339..3792908)	Alkaliphilus metalliredigens QYMF	5313777
YP_001321476.1	CDS	Amet_3697	NC_009633.1	3792940	3793416	R	this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A	complement(3792940..3793416)	Alkaliphilus metalliredigens QYMF	5313778
YP_001321477.1	CDS	Amet_3698	NC_009633.1	3793661	3795901	D	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; TPR repeat-containing protein; GAF domain protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: syf:Synpcc7942_2096 diguanylate cyclase (GGDEF domain); diguanylate cyclase	3793661..3795901	Alkaliphilus metalliredigens QYMF	5313779
YP_001321478.1	CDS	Amet_3699	NC_009633.1	3796151	3796714	R	KEGG: tte:TTE0519 hypothetical protein; hypothetical protein	complement(3796151..3796714)	Alkaliphilus metalliredigens QYMF	5313780
YP_001321479.1	CDS	Amet_3700	NC_009633.1	3796704	3797987	R	TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; Metal-dependent hydrolase HDOD; SMART: metal-dependent phosphohydrolase, HD region; KEGG: tte:TTE0518 HD-GYP domain; metal dependent phosphohydrolase	complement(3796704..3797987)	Alkaliphilus metalliredigens QYMF	5313781
YP_001321480.1	CDS	Amet_3701	NC_009633.1	3798217	3798858	R	KEGG: tte:TTE0517 hypothetical protein; hypothetical protein	complement(3798217..3798858)	Alkaliphilus metalliredigens QYMF	5313782
YP_001321481.1	CDS	Amet_3702	NC_009633.1	3799110	3800495	D	PFAM: GCN5-related N-acetyltransferase; Pyridoxal-5'-phosphate-dependent protein, beta subunit; KEGG: pto:PTO0564 pyridoxal-phosphate dependent enzyme; N-acetyltransferase GCN5	3799110..3800495	Alkaliphilus metalliredigens QYMF	5313783
YP_001321482.1	CDS	Amet_3703	NC_009633.1	3800751	3801878	D	KEGG: cth:Cthe_2170 hypothetical protein; hypothetical protein	3800751..3801878	Alkaliphilus metalliredigens QYMF	5313784
YP_001321483.1	CDS	Amet_3704	NC_009633.1	3801952	3803334	R	PFAM: Na+/H+ antiporter NhaC; KEGG: btk:BT9727_0310 Na+/H+ antiporter; Na+/H+ antiporter NhaC	complement(3801952..3803334)	Alkaliphilus metalliredigens QYMF	5313785
YP_001321484.1	CDS	Amet_3705	NC_009633.1	3803522	3804301	R	KEGG: swo:Swol_1911 hypothetical protein; hypothetical protein	complement(3803522..3804301)	Alkaliphilus metalliredigens QYMF	5313786
YP_001321485.1	CDS	Amet_3706	NC_009633.1	3804386	3805528	R	PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: cac:CAC0391 cystathionine beta-lyase; cystathionine gamma-synthase	complement(3804386..3805528)	Alkaliphilus metalliredigens QYMF	5313787
YP_001321486.1	CDS	Amet_3707	NC_009633.1	3805534	3806691	R	PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: cth:Cthe_2799 cystathionine gamma-synthase; cystathionine gamma-synthase	complement(3805534..3806691)	Alkaliphilus metalliredigens QYMF	5313788
YP_001321487.1	CDS	Amet_3708	NC_009633.1	3806714	3807661	R	catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis; homoserine O-succinyltransferase	complement(3806714..3807661)	Alkaliphilus metalliredigens QYMF	5313789
YP_001321488.1	CDS	Amet_3709	NC_009633.1	3808055	3809428	R	TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase, middle domain protein; KEGG: bat:BAS0232 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase	complement(3808055..3809428)	Alkaliphilus metalliredigens QYMF	5313790
YP_001321489.1	CDS	Amet_3710	NC_009633.1	3809434	3810510	R	TIGRFAM: D-alanine--D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein; KEGG: bca:BCE_0265 D-alanylalanine synthetase; D-alanine--D-alanine ligase	complement(3809434..3810510)	Alkaliphilus metalliredigens QYMF	5313791
YP_001321490.1	CDS	Amet_3711	NC_009633.1	3810599	3812713	R	PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; KEGG: cpr:CPR_0449 sensor histidine kinase; integral membrane sensor signal transduction histidine kinase	complement(3810599..3812713)	Alkaliphilus metalliredigens QYMF	5313792
YP_001321491.1	CDS	Amet_3712	NC_009633.1	3812691	3813389	R	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cpf:CPF_0459 DNA-binding response regulator; two component transcriptional regulator	complement(3812691..3813389)	Alkaliphilus metalliredigens QYMF	5313793
YP_001321492.1	CDS	Amet_3713	NC_009633.1	3813664	3814434	D	PFAM: protein of unknown function DUF833; KEGG: swo:Swol_2245 hypothetical protein; hypothetical protein	3813664..3814434	Alkaliphilus metalliredigens QYMF	5313794
YP_001321493.1	CDS	Amet_3714	NC_009633.1	3814435	3815910	R	PFAM: copper amine oxidase domain protein; KEGG: swo:Swol_1696 hypothetical protein; copper amine oxidase domain-containing protein	complement(3814435..3815910)	Alkaliphilus metalliredigens QYMF	5313795
YP_001321494.1	CDS	Amet_3715	NC_009633.1	3815940	3816545	R	PFAM: regulatory protein, LuxR; response regulator receiver; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: bcl:ABC2125 two-component response regulator; two component LuxR family transcriptional regulator	complement(3815940..3816545)	Alkaliphilus metalliredigens QYMF	5313796
YP_001321495.1	CDS	Amet_3716	NC_009633.1	3816550	3817647	R	PFAM: ATP-binding region, ATPase domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: bcl:ABC2124 two-component sensor histidine kinase; integral membrane sensor signal transduction histidine kinase	complement(3816550..3817647)	Alkaliphilus metalliredigens QYMF	5313797
YP_001321496.1	CDS	Amet_3717	NC_009633.1	3817809	3818495	R	PFAM: ABC-2 type transporter; KEGG: bcl:ABC2123 multidrug ABC transporter permease; ABC transporter	complement(3817809..3818495)	Alkaliphilus metalliredigens QYMF	5313798
YP_001321497.1	CDS	Amet_3718	NC_009633.1	3818492	3819226	R	PFAM: ABC-2 type transporter; KEGG: bcl:ABC2122 multidrug ABC transporter permease; ABC transporter	complement(3818492..3819226)	Alkaliphilus metalliredigens QYMF	5313799
YP_001321498.1	CDS	Amet_3719	NC_009633.1	3819223	3820173	R	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bcl:ABC2121 multidrug ABC transporter ATP-binding protein; ABC transporter-like protein	complement(3819223..3820173)	Alkaliphilus metalliredigens QYMF	5313800
YP_001321499.1	CDS	Amet_3720	NC_009633.1	3820420	3820893	D	TIGRFAM: C_GCAxxG_C_C family protein; KEGG: efa:EF0664 hypothetical protein; C_GCAxxG_C_C family protein	3820420..3820893	Alkaliphilus metalliredigens QYMF	5313801
YP_001321500.1	CDS	Amet_3721	NC_009633.1	3820967	3821929	D	PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: efa:EF0645 exfoliative toxin A, putative; C4-dicarboxylate transporter/malic acid transport protein	3820967..3821929	Alkaliphilus metalliredigens QYMF	5313802
YP_001321501.1	CDS	Amet_3722	NC_009633.1	3822061	3822762	R	PFAM: cyclic nucleotide-binding; regulatory protein, Crp; KEGG: ctc:CTC01876 transcriptional regulatory protein; CRP/FNR family transcriptional regulator	complement(3822061..3822762)	Alkaliphilus metalliredigens QYMF	5313803
YP_001321502.1	CDS	Amet_3723	NC_009633.1	3823145	3824368	R	PFAM: beta-lactamase domain protein; flavodoxin/nitric oxide synthase; KEGG: ctc:CTC01875 flavodoxin; beta-lactamase domain-containing protein	complement(3823145..3824368)	Alkaliphilus metalliredigens QYMF	5313804
YP_001321503.1	CDS	Amet_3724	NC_009633.1	3824503	3824748	D	KEGG: sth:STH1728 hypothetical protein, glutamine-rich; glutamine-rich	3824503..3824748	Alkaliphilus metalliredigens QYMF	5313805
YP_001321504.1	CDS	Amet_3725	NC_009633.1	3824760	3826073	D	PFAM: Chloride channel, core; KEGG: bha:BH0663 hypothetical protein; chloride channel core protein	3824760..3826073	Alkaliphilus metalliredigens QYMF	5313806
YP_001321505.1	CDS	Amet_3726	NC_009633.1	3826127	3826837	R	PFAM: protein of unknown function DUF421; KEGG: dsy:DSY3481 hypothetical protein; hypothetical protein	complement(3826127..3826837)	Alkaliphilus metalliredigens QYMF	5313807
YP_001321506.1	CDS	Amet_3727	NC_009633.1	3827046	3828323	R	TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: maq:Maqu_0352 TRAP dicarboxylate transporter, DctM subunit; TRAP dicarboxylate transporter subunit DctM	complement(3827046..3828323)	Alkaliphilus metalliredigens QYMF	5313808
YP_001321507.1	CDS	Amet_3728	NC_009633.1	3828339	3828977	R	PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: sil:SPO1146 TRAP dicarboxylate transporter, DctQ subunit; tripartite ATP-independent periplasmic transporter DctQ	complement(3828339..3828977)	Alkaliphilus metalliredigens QYMF	5313809
YP_001321508.1	CDS	Amet_3729	NC_009633.1	3829051	3830190	R	PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: hha:Hhal_0448 TRAP dicarboxylate transporter-DctP subunit; TRAP dicarboxylate transporter subunit DctP	complement(3829051..3830190)	Alkaliphilus metalliredigens QYMF	5313810
YP_001321509.1	CDS	Amet_3731	NC_009633.1	3831527	3832246	D	PFAM: PHP C-terminal domain protein; SMART: phosphoesterase PHP domain protein; KEGG: cno:NT01CX_1282 PHP family protein; putative hydrolase	3831527..3832246	Alkaliphilus metalliredigens QYMF	5313812
YP_001321510.1	CDS	Amet_3732	NC_009633.1	3832306	3832716	R	hypothetical protein	complement(3832306..3832716)	Alkaliphilus metalliredigens QYMF	5313813
YP_001321511.1	CDS	Amet_3733	NC_009633.1	3832745	3833134	R	hypothetical protein	complement(3832745..3833134)	Alkaliphilus metalliredigens QYMF	5313814
YP_001321512.1	CDS	Amet_3734	NC_009633.1	3833347	3833610	R	hypothetical protein	complement(3833347..3833610)	Alkaliphilus metalliredigens QYMF	5313815
YP_001321513.1	CDS	Amet_3735	NC_009633.1	3834047	3834865	D	PFAM: nitroreductase; KEGG: dsy:DSY1470 hypothetical protein; nitroreductase	3834047..3834865	Alkaliphilus metalliredigens QYMF	5313816
YP_001321514.1	CDS	Amet_3736	NC_009633.1	3834932	3835504	R	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bsu:BG13855 similar to thiol peroxidase; redoxin domain-containing protein	complement(3834932..3835504)	Alkaliphilus metalliredigens QYMF	5313817
YP_001321515.1	CDS	Amet_3737	NC_009633.1	3835638	3836840	R	TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: tte:TTE0596 metal-dependent amidase/aminoacylase/carboxypeptidase; amidohydrolase	complement(3835638..3836840)	Alkaliphilus metalliredigens QYMF	5313818
YP_001321516.1	CDS	Amet_3738	NC_009633.1	3837113	3838156	D	PFAM: conserved hypothetical protein 698; KEGG: ctc:CTC01844 membrane spanning protein, similar to vegetatible incompatibility protein HET-E-1; hypothetical protein	3837113..3838156	Alkaliphilus metalliredigens QYMF	5313819
YP_001321517.1	CDS	Amet_3739	NC_009633.1	3838151	3838342	R	KEGG: pin:Ping_1432 hypothetical protein; hypothetical protein	complement(3838151..3838342)	Alkaliphilus metalliredigens QYMF	5313820
YP_001321518.1	CDS	Amet_3740	NC_009633.1	3838579	3839499	D	PFAM: protein of unknown function DUF6, transmembrane; KEGG: mmp:MMP0210 hypothetical protein; hypothetical protein	3838579..3839499	Alkaliphilus metalliredigens QYMF	5313821
YP_001321519.1	CDS	Amet_3741	NC_009633.1	3839865	3840383	R	hypothetical protein	complement(3839865..3840383)	Alkaliphilus metalliredigens QYMF	5313822
YP_001321520.1	CDS	Amet_3742	NC_009633.1	3840575	3841114	R	KEGG: swo:Swol_1797 hypothetical protein; hypothetical protein	complement(3840575..3841114)	Alkaliphilus metalliredigens QYMF	5313823
YP_001321521.1	CDS	Amet_3743	NC_009633.1	3841714	3842535	R	PFAM: N-formylglutamate amidohydrolase; KEGG: sil:SPOA0448 N-formylglutamate amidohydrolase; N-formylglutamate amidohydrolase	complement(3841714..3842535)	Alkaliphilus metalliredigens QYMF	5313824
YP_001321522.1	CDS	Amet_3744	NC_009633.1	3842538	3844682	R	PFAM: phosphoribosylglycinamide synthetase; protein of unknown function DUF201; D-alanine--D-alanine ligase domain protein; RimK domain protein ATP-grasp; KEGG: bja:bll8229 hypothetical protein; D-alanine--D-alanine ligase	complement(3842538..3844682)	Alkaliphilus metalliredigens QYMF	5313825
YP_001321523.1	CDS	Amet_3745	NC_009633.1	3844685	3846322	R	TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; KEGG: bja:bll8231 putative gamma-glutamyltranspeptidase; gamma-glutamyltransferase	complement(3844685..3846322)	Alkaliphilus metalliredigens QYMF	5313826
YP_001321524.1	CDS	Amet_3746	NC_009633.1	3846788	3848098	R	KEGG: cac:CAC0769 hypothetical protein; hypothetical protein	complement(3846788..3848098)	Alkaliphilus metalliredigens QYMF	5313827
YP_001321525.1	CDS	Amet_3747	NC_009633.1	3848162	3849577	R	PFAM: FAD linked oxidase domain protein; KEGG: tte:TTE0224 FAD/FMN-containing dehydrogenases; FAD linked oxidase domain-containing protein	complement(3848162..3849577)	Alkaliphilus metalliredigens QYMF	5313828
YP_001321526.1	CDS	Amet_3748	NC_009633.1	3849555	3850580	R	PFAM: Electron transfer flavoprotein, alpha/beta-subunit-like; Electron transfer flavoprotein, alpha subunit-like; KEGG: tte:TTE0547 Electron transfer flavoprotein alpha-subunit; electron transfer flavoprotein subunit alpha-like protein	complement(3849555..3850580)	Alkaliphilus metalliredigens QYMF	5313829
YP_001321527.1	CDS	Amet_3749	NC_009633.1	3850594	3851391	R	PFAM: Electron transfer flavoprotein, alpha/beta-subunit-like; KEGG: sfu:Sfum_1372 electron transfer flavoprotein beta-subunit; electron transfer flavoprotein subunit alpha/beta-like protein	complement(3850594..3851391)	Alkaliphilus metalliredigens QYMF	5313830
YP_001321528.1	CDS	Amet_3750	NC_009633.1	3851509	3852213	R	PFAM: regulatory protein GntR, HTH; GntR domain protein; Helix-turn-helix, type 11 domain protein; KEGG: mta:Moth_2304 GntR-like; GntR family transcriptional regulator	complement(3851509..3852213)	Alkaliphilus metalliredigens QYMF	5313831
YP_001321529.1	CDS	Amet_3751	NC_009633.1	3852387	3854066	R	TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: dvl:Dvul_0784 L-lactate transport; L-lactate transport	complement(3852387..3854066)	Alkaliphilus metalliredigens QYMF	5313832
YP_001321530.1	CDS	Amet_3752	NC_009633.1	3854655	3855287	R	PFAM: protein of unknown function DUF1271; SMART: zinc finger, CDGSH-type domain protein; KEGG: mbu:Mbur_2272 protein of unknown function DUF1271; hypothetical protein	complement(3854655..3855287)	Alkaliphilus metalliredigens QYMF	5313833
YP_001321531.1	CDS	Amet_3753	NC_009633.1	3855492	3857906	D	TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; extracellular solute-binding protein, family 3; metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: dsy:DSY1176 hypothetical protein; diguanylate cyclase and metal dependent phosphohydrolase	3855492..3857906	Alkaliphilus metalliredigens QYMF	5313834
YP_001321532.1	CDS	Amet_3754	NC_009633.1	3858052	3860052	R	PFAM: histidine kinase, HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: ctc:CTC00924 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer	complement(3858052..3860052)	Alkaliphilus metalliredigens QYMF	5313835
YP_001321533.1	CDS	Amet_3755	NC_009633.1	3860255	3861709	R	PFAM: helicase domain protein; DbpA, RNA-binding domain protein; type III restriction protein, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: bat:BAS5307 ATP-dependent RNA helicase, DEAD/DEAH box family; DEAD/DEAH box helicase	complement(3860255..3861709)	Alkaliphilus metalliredigens QYMF	5313836
YP_001321534.1	CDS	mtnK	NC_009633.1	3861869	3863077	R	phosphorylates methylthioribose to form methylthioribose-1-phosphate; involved in methionine salvage pathway; methylthioribose kinase	complement(3861869..3863077)	Alkaliphilus metalliredigens QYMF	5313837
YP_001321535.1	CDS	mtnA	NC_009633.1	3863108	3864160	R	isomerizes methylthioribose-1-phosphate into methylthioribulose-1-phosphate; involved in methionine salvage pathway; methylthioribose-1-phosphate isomerase	complement(3863108..3864160)	Alkaliphilus metalliredigens QYMF	5313838
YP_001321536.1	CDS	Amet_3758	NC_009633.1	3864193	3864849	R	catalyzes the formation of glycerone phosphate and (S)-lactaldehyde from L-fuculose 1-phosphate; L-fuculose phosphate aldolase	complement(3864193..3864849)	Alkaliphilus metalliredigens QYMF	5313839
YP_001321537.1	CDS	Amet_3759	NC_009633.1	3865163	3866197	D	PFAM: chemotaxis sensory transducer; KEGG: cac:CAC0432 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer	3865163..3866197	Alkaliphilus metalliredigens QYMF	5313840
YP_001321538.1	CDS	Amet_3760	NC_009633.1	3866251	3866718	D	PFAM: CheW domain protein; KEGG: chy:CHY_0966 chemotaxis protein CheW; putative CheW protein	3866251..3866718	Alkaliphilus metalliredigens QYMF	5313841
YP_001321539.1	CDS	Amet_3761	NC_009633.1	3866934	3868193	R	KEGG: lsl:LSL_0479 protein EcsB; hypothetical protein	complement(3866934..3868193)	Alkaliphilus metalliredigens QYMF	5313842
YP_001321540.1	CDS	Amet_3762	NC_009633.1	3868190	3868921	R	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: oih:OB1155 ABC transporter ATP-binding protein; ABC transporter-like protein	complement(3868190..3868921)	Alkaliphilus metalliredigens QYMF	5313843
YP_001321541.1	CDS	Amet_3763	NC_009633.1	3869224	3869988	R	PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: dsy:DSY2631 carbon monoxide dehydrogenase maturation factor; cobyrinic acid a,c-diamide synthase	complement(3869224..3869988)	Alkaliphilus metalliredigens QYMF	5313844
YP_001321542.1	CDS	Amet_3764	NC_009633.1	3870178	3872100	R	TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit; PFAM: Prismane; KEGG: chy:CHY_1824 carbon-monoxide dehydrogenase, catalytic subunit; carbon-monoxide dehydrogenase, catalytic subunit	complement(3870178..3872100)	Alkaliphilus metalliredigens QYMF	5313845
YP_001321543.1	CDS	Amet_3765	NC_009633.1	3872151	3872624	R	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: chy:CHY_1825 iron-sulfur cluster-binding protein CooF; 4Fe-4S ferredoxin	complement(3872151..3872624)	Alkaliphilus metalliredigens QYMF	5313846
YP_001321544.1	CDS	Amet_3766	NC_009633.1	3872833	3874731	R	PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; 4-vinyl reductase, 4VR; SMART: AAA ATPase; KEGG: tte:TTE1710 NtrC family transcriptional regulator, ATPase domain; sigma-54 dependent trancsriptional regulator	complement(3872833..3874731)	Alkaliphilus metalliredigens QYMF	5313847
YP_001321545.1	CDS	Amet_3767	NC_009633.1	3874875	3876653	R	TIGRFAM: oligoendopeptidase F; PFAM: peptidase M3A and M3B, thimet/oligopeptidase F; Oligopeptidase F; KEGG: bha:BH2856 peptidase; oligoendopeptidase F	complement(3874875..3876653)	Alkaliphilus metalliredigens QYMF	5313848
YP_001321546.1	CDS	Amet_3768	NC_009633.1	3876756	3876983	R	PFAM: protein of unknown function DUF1653; KEGG: pat:Patl_0461 protein of unknown function DUF1653; hypothetical protein	complement(3876756..3876983)	Alkaliphilus metalliredigens QYMF	5313849
YP_001321547.1	CDS	Amet_3769	NC_009633.1	3877059	3879032	R	SMART: helicase c2; KEGG: sth:STH2740 ATP-dependent helicase; helicase c2	complement(3877059..3879032)	Alkaliphilus metalliredigens QYMF	5313850
YP_001321548.1	CDS	Amet_3770	NC_009633.1	3879322	3880542	R	PFAM: major facilitator superfamily MFS_1; KEGG: btk:BT9727_2273 permease; possible macrolide-efflux protein; major facilitator superfamily transporter	complement(3879322..3880542)	Alkaliphilus metalliredigens QYMF	5313851
YP_001321549.1	CDS	Amet_3771	NC_009633.1	3880544	3881332	R	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cpr:CPR_0797 ferrichrome transport ATP-binding protein FhuC; ABC transporter-like protein	complement(3880544..3881332)	Alkaliphilus metalliredigens QYMF	5313852
YP_001321550.1	CDS	Amet_3772	NC_009633.1	3881333	3882340	R	PFAM: transport system permease protein; KEGG: cpe:CPE0812 probable ferrichrome ABC transporter; transport system permease	complement(3881333..3882340)	Alkaliphilus metalliredigens QYMF	5313853
YP_001321551.1	CDS	Amet_3773	NC_009633.1	3882342	3883328	R	PFAM: transport system permease protein; KEGG: cpr:CPR_0795 iron compound ABC transporter, permease protein; transport system permease	complement(3882342..3883328)	Alkaliphilus metalliredigens QYMF	5313854
YP_001321552.1	CDS	Amet_3774	NC_009633.1	3883315	3884274	R	PFAM: periplasmic binding protein; KEGG: cpf:CPF_0807 iron compound ABC transporter, iron compound-binding protein; periplasmic binding protein	complement(3883315..3884274)	Alkaliphilus metalliredigens QYMF	5313855
YP_001321553.1	CDS	Amet_3775	NC_009633.1	3884512	3885513	D	PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: gfo:orf1663 AraC family transcriptional regulator protein; helix-turn-helix domain-containing protein	3884512..3885513	Alkaliphilus metalliredigens QYMF	5313856
YP_001321554.1	CDS	Amet_3776	NC_009633.1	3885877	3886926	D	TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: aba:Acid345_3638 methyltransferase; S-adenosyl-methyltransferase MraW	3885877..3886926	Alkaliphilus metalliredigens QYMF	5313857
YP_001321555.1	CDS	Amet_3777	NC_009633.1	3887219	3888925	R	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: cac:CAC3397 membrane associated methyl-accepting chemotaxis protein (with HamP domain); methyl-accepting chemotaxis sensory transducer	complement(3887219..3888925)	Alkaliphilus metalliredigens QYMF	5313858
YP_001321556.1	CDS	Amet_3778	NC_009633.1	3889225	3889686	D	Contains selenocysteine; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: sat:SYN_03642 thioredoxin peroxidase; alkyl hydroperoxide reductase	3889225..3889686	Alkaliphilus metalliredigens QYMF	5313859
YP_001321557.1	CDS	Amet_3779	NC_009633.1	3889969	3892356	R	PFAM: helicase domain protein; SecA DEAD domain protein; SecA Wing and Scaffold; SecA preprotein cross-linking region; KEGG: tfu:Tfu_0761 preprotein translocase SecA subunit; SecA DEAD domain-containing protein	complement(3889969..3892356)	Alkaliphilus metalliredigens QYMF	5313860
YP_001321558.1	CDS	Amet_3780	NC_009633.1	3892885	3893037	R	hypothetical protein	complement(3892885..3893037)	Alkaliphilus metalliredigens QYMF	5313861
YP_001321559.1	CDS	Amet_3781	NC_009633.1	3893066	3894271	R	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: cno:NT01CX_0803 major facilitator superfamily protein; major facilitator superfamily transporter	complement(3893066..3894271)	Alkaliphilus metalliredigens QYMF	5313862
YP_001321560.1	CDS	Amet_3782	NC_009633.1	3894332	3894673	R	PFAM: Cupin 2, conserved barrel domain protein; KEGG: cac:CAC3376 possible pectin degradation protein (sugar phosphate isomerase family); cupin	complement(3894332..3894673)	Alkaliphilus metalliredigens QYMF	5313863
YP_001321561.1	CDS	Amet_3783	NC_009633.1	3894720	3896324	R	PFAM: Mannitol dehydrogenase, C-terminal domain; Mannitol dehydrogenase rossman, N-terminal domain; KEGG: mta:Moth_0429 mannitol dehydrogenase; mannitol dehydrogenase domain-containing protein	complement(3894720..3896324)	Alkaliphilus metalliredigens QYMF	5313864
YP_001321562.1	CDS	Amet_3784	NC_009633.1	3896464	3897534	R	catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate; mannonate dehydratase	complement(3896464..3897534)	Alkaliphilus metalliredigens QYMF	5313865
YP_001321563.1	CDS	Amet_3785	NC_009633.1	3897750	3898220	R	hypothetical protein	complement(3897750..3898220)	Alkaliphilus metalliredigens QYMF	5313866
YP_001321564.1	CDS	Amet_3786	NC_009633.1	3898229	3899521	R	TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: msm:MSMEG_6845 trap dicarboxylate transporter, DctM subunit; TRAP dicarboxylate transporter subunit DctM	complement(3898229..3899521)	Alkaliphilus metalliredigens QYMF	5313867
YP_001321565.1	CDS	Amet_3787	NC_009633.1	3899511	3900044	R	PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: vch:VC1778 hypothetical protein; tripartite ATP-independent periplasmic transporter DctQ	complement(3899511..3900044)	Alkaliphilus metalliredigens QYMF	5313868
YP_001321566.1	CDS	Amet_3788	NC_009633.1	3900202	3901269	R	PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: msm:MSMEG_6844 TRAP-T family protein transporter, dCTP; TRAP dicarboxylate transporter subunit DctP	complement(3900202..3901269)	Alkaliphilus metalliredigens QYMF	5313869
YP_001321567.1	CDS	Amet_3789	NC_009633.1	3901670	3902359	R	PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: bld:BLi01354 hypothetical protein; GntR family transcriptional regulator	complement(3901670..3902359)	Alkaliphilus metalliredigens QYMF	5313870
YP_001321568.1	CDS	Amet_3790	NC_009633.1	3902656	3903372	R	KEGG: nha:Nham_2838 zinc finger, SWIM-type; zinc finger, SWIM-type	complement(3902656..3903372)	Alkaliphilus metalliredigens QYMF	5313871
YP_001321569.1	CDS	Amet_3791	NC_009633.1	3903372	3906023	R	PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicases-like; KEGG: nha:Nham_2839 SNF2-related; non-specific serine/threonine protein kinase	complement(3903372..3906023)	Alkaliphilus metalliredigens QYMF	5313872
YP_001321570.1	CDS	Amet_3792	NC_009633.1	3906266	3906736	R	hypothetical protein	complement(3906266..3906736)	Alkaliphilus metalliredigens QYMF	5313873
YP_001321571.1	CDS	Amet_3793	NC_009633.1	3906738	3907499	R	PFAM: protein of unknown function DUF1568; KEGG: swo:Swol_2198 transposase; hypothetical protein	complement(3906738..3907499)	Alkaliphilus metalliredigens QYMF	5313874
YP_001321572.1	CDS	Amet_3794	NC_009633.1	3907813	3909300	R	TIGRFAM: xylulokinase; PFAM: carbohydrate kinase, FGGY; KEGG: mta:Moth_2025 xylulokinase; xylulokinase	complement(3907813..3909300)	Alkaliphilus metalliredigens QYMF	5313875
YP_001321573.1	CDS	Amet_3795	NC_009633.1	3909334	3910512	R	PFAM: ROK family protein; KEGG: cac:CAC3673 XylR transcriptional regulator; ROK family protein	complement(3909334..3910512)	Alkaliphilus metalliredigens QYMF	5313876
YP_001321574.1	CDS	Amet_3796	NC_009633.1	3910668	3911981	R	TIGRFAM: xylose isomerase; PFAM: Xylose isomerase domain protein TIM barrel; KEGG: tma:TM1667 xylose isomerase; xylose isomerase	complement(3910668..3911981)	Alkaliphilus metalliredigens QYMF	5313877
YP_001321575.1	CDS	Amet_3797	NC_009633.1	3911956	3913182	R	PFAM: inner-membrane translocator; KEGG: gka:GK1908 L-arabinose ABC transporter (permease); monosaccharide-transporting ATPase	complement(3911956..3913182)	Alkaliphilus metalliredigens QYMF	5313878
YP_001321576.1	CDS	Amet_3798	NC_009633.1	3913198	3914760	R	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gka:GK1909 ABC transporter (ATP-binding protein); ABC transporter-like protein	complement(3913198..3914760)	Alkaliphilus metalliredigens QYMF	5313879
YP_001321577.1	CDS	Amet_3799	NC_009633.1	3914863	3915960	R	KEGG: rle:RL3617 putative solute-binding component of ABC transporter; putative ABC transporter solute-binding protein	complement(3914863..3915960)	Alkaliphilus metalliredigens QYMF	5313880
YP_001321578.1	CDS	Amet_3800	NC_009633.1	3916247	3917296	R	PFAM: Aldose 1-epimerase; KEGG: rba:RB6537 aldose 1-epimerase; aldose 1-epimerase	complement(3916247..3917296)	Alkaliphilus metalliredigens QYMF	5313881
YP_001321579.1	CDS	Amet_3801	NC_009633.1	3917443	3918015	R	KEGG: swo:Swol_0136 transposase and inactivated derivatives-like protein; transposase and inactivated derivatives-like protein	complement(3917443..3918015)	Alkaliphilus metalliredigens QYMF	5313882
YP_001321580.1	CDS	Amet_3803	NC_009633.1	3918356	3921295	R	PFAM: protein of unknown function DUF291; Ig family protein; Ig domain protein; copper amine oxidase domain protein; KEGG: dsy:DSY0535 hypothetical protein; copper amine oxidase domain-containing protein	complement(3918356..3921295)	Alkaliphilus metalliredigens QYMF	5313884
YP_001321581.1	CDS	Amet_3804	NC_009633.1	3921711	3922817	R	PFAM: response regulator receiver; KEGG: dsy:DSY0459 hypothetical protein; response regulator receiver/SARP domain-containing protein	complement(3921711..3922817)	Alkaliphilus metalliredigens QYMF	5313885
YP_001321582.1	CDS	Amet_3805	NC_009633.1	3922853	3924571	R	PFAM: ATP-binding region, ATPase domain protein; histidine kinase internal region; KEGG: tte:TTE0871 Regulator of cell autolysis; signal transduction histidine kinase LytS	complement(3922853..3924571)	Alkaliphilus metalliredigens QYMF	5313886
YP_001321583.1	CDS	Amet_3806	NC_009633.1	3924800	3926173	R	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: dsy:DSY3766 hypothetical protein; MATE efflux family protein	complement(3924800..3926173)	Alkaliphilus metalliredigens QYMF	5313887
YP_001321584.1	CDS	Amet_3807	NC_009633.1	3926240	3927991	R	PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: dsy:DSY3478 hypothetical protein; ABC transporter-like protein	complement(3926240..3927991)	Alkaliphilus metalliredigens QYMF	5313888
YP_001321585.1	CDS	Amet_3808	NC_009633.1	3927984	3929813	R	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dsy:DSY3479 hypothetical protein; ABC transporter-like protein	complement(3927984..3929813)	Alkaliphilus metalliredigens QYMF	5313889
YP_001321586.1	CDS	Amet_3809	NC_009633.1	3930066	3931061	R	PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: ctc:CTC01411 transcriptional regulatory protein; helix-turn-helix domain-containing protein	complement(3930066..3931061)	Alkaliphilus metalliredigens QYMF	5313890
YP_001321587.1	CDS	Amet_3810	NC_009633.1	3931274	3931468	R	hypothetical protein	complement(3931274..3931468)	Alkaliphilus metalliredigens QYMF	5313891
YP_001321588.1	CDS	Amet_3811	NC_009633.1	3931672	3932064	R	KEGG: dsy:DSY4223 hypothetical protein; hypothetical protein	complement(3931672..3932064)	Alkaliphilus metalliredigens QYMF	5313892
YP_001321589.1	CDS	Amet_3812	NC_009633.1	3932061	3932543	R	TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: dsy:DSY1999 hypothetical protein; ECF subfamily RNA polymerase sigma-24 factor	complement(3932061..3932543)	Alkaliphilus metalliredigens QYMF	5313893
YP_001321590.1	CDS	Amet_3813	NC_009633.1	3932886	3933128	R	KEGG: cac:CAC3492 hypothetical protein; hypothetical protein	complement(3932886..3933128)	Alkaliphilus metalliredigens QYMF	5313894
YP_001321591.1	CDS	Amet_3814	NC_009633.1	3933133	3933879	R	KEGG: bth:BT_1587 hypothetical protein; hypothetical protein	complement(3933133..3933879)	Alkaliphilus metalliredigens QYMF	5313895
YP_001321592.1	CDS	Amet_3815	NC_009633.1	3933941	3934207	R	KEGG: bth:BT_4495 hypothetical protein; hypothetical protein	complement(3933941..3934207)	Alkaliphilus metalliredigens QYMF	5313896
YP_001321593.1	CDS	Amet_3816	NC_009633.1	3934393	3935514	R	TIGRFAM: transposase, IS605 OrfB family; PFAM: putative transposase, IS891/IS1136/IS1341 family; transposase, IS605 OrfB; KEGG: bcz:pE33L466_0272 transposase; IS605 family transposase OrfB	complement(3934393..3935514)	Alkaliphilus metalliredigens QYMF	5313897
YP_001321594.1	CDS	Amet_3817	NC_009633.1	3935511	3935996	R	PFAM: transposase IS200-family protein; KEGG: ctc:CTC00621 transposase; transposase IS200-family protein	complement(3935511..3935996)	Alkaliphilus metalliredigens QYMF	5313898
YP_001321595.1	CDS	Amet_3818	NC_009633.1	3936004	3936351	R	PFAM: regulatory protein, DeoR; Helix-turn-helix, type 11 domain protein; KEGG: cac:CAC3494 transcription regulator, YOBV B.subtilis homolog; helix-turn-helix, type 11 domain-containing protein	complement(3936004..3936351)	Alkaliphilus metalliredigens QYMF	5313899
YP_001321596.1	CDS	Amet_3819	NC_009633.1	3936631	3938505	D	PFAM: transposase, IS4 family protein; KEGG: tte:TTE2604 transposase; transposase, IS4 family protein	3936631..3938505	Alkaliphilus metalliredigens QYMF	5313900
YP_001321597.1	CDS	Amet_3821	NC_009633.1	3939125	3939868	R	PFAM: protein of unknown function DUF1568; KEGG: swo:Swol_1055 transposase; hypothetical protein	complement(3939125..3939868)	Alkaliphilus metalliredigens QYMF	5313902
YP_001321598.1	CDS	Amet_3822	NC_009633.1	3940078	3940377	R	PFAM: microcompartments protein; KEGG: ssa:SSA_0525 microcompartment protein, putative; microcompartments protein	complement(3940078..3940377)	Alkaliphilus metalliredigens QYMF	5313903
YP_001321599.1	CDS	Amet_3823	NC_009633.1	3940401	3941057	R	PFAM: Propanediol utilization protein; KEGG: ctc:CTC01440 hypothetical protein; propanediol utilization protein	complement(3940401..3941057)	Alkaliphilus metalliredigens QYMF	5313904
YP_001321600.1	CDS	Amet_3824	NC_009633.1	3941058	3942584	R	TIGRFAM: acetaldehyde dehydrogenase (acetylating); PFAM: aldehyde dehydrogenase; KEGG: ctc:CTC01441 acetaldehyde dehydrogenase (acetylating); acetaldehyde dehydrogenase	complement(3941058..3942584)	Alkaliphilus metalliredigens QYMF	5313905
YP_001321601.1	CDS	Amet_3825	NC_009633.1	3942621	3943220	R	PFAM: microcompartments protein; KEGG: ctc:CTC01442 carbon dioxide concentrating mechanism protein CcmK homolog; microcompartments protein	complement(3942621..3943220)	Alkaliphilus metalliredigens QYMF	5313906
YP_001321602.1	CDS	Amet_3826	NC_009633.1	3943237	3943917	R	KEGG: dsy:DSY4995 hypothetical protein; hypothetical protein	complement(3943237..3943917)	Alkaliphilus metalliredigens QYMF	5313907
YP_001321603.1	CDS	Amet_3827	NC_009633.1	3943963	3944511	R	PFAM: microcompartments protein; KEGG: dsy:DSY4996 hypothetical protein; microcompartments protein	complement(3943963..3944511)	Alkaliphilus metalliredigens QYMF	5313908
YP_001321604.1	CDS	Amet_3828	NC_009633.1	3944504	3945841	R	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: dsy:DSY4997 hypothetical protein; respiratory-chain NADH dehydrogenase domain-containing protein	complement(3944504..3945841)	Alkaliphilus metalliredigens QYMF	5313909
YP_001321605.1	CDS	Amet_3829	NC_009633.1	3945857	3946120	R	PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; KEGG: dsy:DSY4998 hypothetical protein; ethanolamine utilization protein EutN/carboxysome structural protein Ccml	complement(3945857..3946120)	Alkaliphilus metalliredigens QYMF	5313910
YP_001321606.1	CDS	Amet_3830	NC_009633.1	3946098	3946418	R	PFAM: microcompartments protein; KEGG: dsy:DSY4999 hypothetical protein; microcompartments protein	complement(3946098..3946418)	Alkaliphilus metalliredigens QYMF	5313911
YP_001321607.1	CDS	Amet_3831	NC_009633.1	3946432	3947277	R	TIGRFAM: ethanolamine utilization protein EutJ family protein; KEGG: ctc:CTC01444 ethanolamine utilization protein eutJ; ethanolamine utilization protein EutJ family protein	complement(3946432..3947277)	Alkaliphilus metalliredigens QYMF	5313912
YP_001321608.1	CDS	Amet_3832	NC_009633.1	3947259	3947897	R	KEGG: ctc:CTC01445 hypothetical protein; hypothetical protein	complement(3947259..3947897)	Alkaliphilus metalliredigens QYMF	5313913
YP_001321609.1	CDS	Amet_3833	NC_009633.1	3947908	3948357	R	KEGG: dsy:DSY5002 hypothetical protein; hypothetical protein	complement(3947908..3948357)	Alkaliphilus metalliredigens QYMF	5313914
YP_001321610.1	CDS	Amet_3834	NC_009633.1	3948354	3948707	R	PFAM: microcompartments protein; KEGG: ctc:CTC01447 ethanolamine utilization protein eutS; microcompartments protein	complement(3948354..3948707)	Alkaliphilus metalliredigens QYMF	5313915
YP_001321611.1	CDS	Amet_3835	NC_009633.1	3948749	3949696	R	TIGRFAM: glycyl-radical enzyme activating protein family; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Radical SAM domain protein; KEGG: ctc:CTC01448 benzylsuccinate synthase activating enzyme; glycyl-radical activating family protein	complement(3948749..3949696)	Alkaliphilus metalliredigens QYMF	5313916
YP_001321612.1	CDS	Amet_3836	NC_009633.1	3949827	3952364	R	PFAM: formate C-acetyltransferase glycine radical; pyruvate formate-lyase, PFL; KEGG: ctc:CTC01449 formate acetyltransferase 2; formate C-acetyltransferase	complement(3949827..3952364)	Alkaliphilus metalliredigens QYMF	5313917
YP_001321613.1	CDS	Amet_3837	NC_009633.1	3952399	3952701	R	PFAM: microcompartments protein; KEGG: dde:Dde_3284 carbon dioxide concentrating mechanism protein (PduA related)-like; microcompartments protein	complement(3952399..3952701)	Alkaliphilus metalliredigens QYMF	5313918
YP_001321614.1	CDS	Amet_3838	NC_009633.1	3952726	3953025	R	PFAM: microcompartments protein; KEGG: dde:Dde_3284 carbon dioxide concentrating mechanism protein (PduA related)-like; microcompartments protein	complement(3952726..3953025)	Alkaliphilus metalliredigens QYMF	5313919
YP_001321615.1	CDS	Amet_3839	NC_009633.1	3953059	3953325	R	KEGG: dde:Dde_3289 hypothetical protein; hypothetical protein	complement(3953059..3953325)	Alkaliphilus metalliredigens QYMF	5313920
YP_001321616.1	CDS	Amet_3840	NC_009633.1	3953312	3954445	R	KEGG: ctc:CTC01451 membrane spanning protein; membrane spanning protein	complement(3953312..3954445)	Alkaliphilus metalliredigens QYMF	5313921
YP_001321617.1	CDS	Amet_3841	NC_009633.1	3954770	3955687	R	PFAM: Choline/ethanolamine kinase; aminoglycoside phosphotransferase; KEGG: cpr:CPR_0594 choline/ethanolamine kinase family protein; choline/ethanolamine kinase	complement(3954770..3955687)	Alkaliphilus metalliredigens QYMF	5313922
YP_001321618.1	CDS	Amet_3842	NC_009633.1	3956057	3957211	D	PFAM: iron-containing alcohol dehydrogenase; KEGG: cno:NT01CX_0486 alcetaldehyde dehydrogenase or NADPH-dependent butanol dehydrogenase; iron-containing alcohol dehydrogenase	3956057..3957211	Alkaliphilus metalliredigens QYMF	5313923
YP_001321619.1	CDS	Amet_3843	NC_009633.1	3957476	3958669	D	PFAM: ATP-binding region, ATPase domain protein; histidine kinase internal region; KEGG: cno:NT01CX_0495 sensor histidine kinase, putative; signal transduction histidine kinase LytS	3957476..3958669	Alkaliphilus metalliredigens QYMF	5313924
YP_001321620.1	CDS	Amet_3844	NC_009633.1	3958672	3959412	D	PFAM: helix-turn-helix- domain containing protein, AraC type; response regulator receiver; KEGG: cno:NT01CX_0496 two-component response regulator; response regulator receiver protein	3958672..3959412	Alkaliphilus metalliredigens QYMF	5313925
YP_001321621.1	CDS	Amet_3845	NC_009633.1	3959581	3959748	R	hypothetical protein	complement(3959581..3959748)	Alkaliphilus metalliredigens QYMF	5313926
YP_001321622.1	CDS	Amet_3846	NC_009633.1	3959745	3960620	R	PFAM: helix-turn-helix- domain containing protein, AraC type; transcription activator, effector binding; KEGG: bcz:BCZK2776 transcriptional regulator, AraC family; transcription activator, effector binding	complement(3959745..3960620)	Alkaliphilus metalliredigens QYMF	5313927
YP_001321623.1	CDS	Amet_3847	NC_009633.1	3960617	3963145	R	PFAM: ABC transporter related; KEGG: vch:VC0394 excinuclease ABC, subunit A; ABC transporter-like protein	complement(3960617..3963145)	Alkaliphilus metalliredigens QYMF	5313928
YP_001321624.1	CDS	Amet_3850	NC_009633.1	3964548	3965192	R	KEGG: dsy:DSY0628 hypothetical protein; hypothetical protein	complement(3964548..3965192)	Alkaliphilus metalliredigens QYMF	5313931
YP_001321625.1	CDS	Amet_3851	NC_009633.1	3965272	3965901	R	PFAM: regulatory protein, TetR; KEGG: dsy:DSY4740 hypothetical protein; TetR family transcriptional regulator	complement(3965272..3965901)	Alkaliphilus metalliredigens QYMF	5313932
YP_001321626.1	CDS	Amet_3852	NC_009633.1	3966154	3967629	R	PFAM: beta-lactamase domain protein; KEGG: cth:Cthe_2754 beta-lactamase-like protein; beta-lactamase domain-containing protein	complement(3966154..3967629)	Alkaliphilus metalliredigens QYMF	5313933
YP_001321627.1	CDS	Amet_3853	NC_009633.1	3967682	3967891	R	hypothetical protein	complement(3967682..3967891)	Alkaliphilus metalliredigens QYMF	5313934
YP_001321628.1	CDS	Amet_3854	NC_009633.1	3967895	3968638	R	PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: dsy:DSY0836 hypothetical protein; IstB ATP binding domain-containing protein	complement(3967895..3968638)	Alkaliphilus metalliredigens QYMF	5313935
YP_001321629.1	CDS	Amet_3855	NC_009633.1	3968626	3970179	R	PFAM: Integrase, catalytic region; KEGG: bha:BH3965 transposase (22); integrase catalytic subunit	complement(3968626..3970179)	Alkaliphilus metalliredigens QYMF	5313936
YP_001321630.1	CDS	Amet_3856	NC_009633.1	3970310	3970756	R	PFAM: protein of unknown function UPF0016; KEGG: sat:SYN_01349 hypothetical membrane protein; hypothetical protein	complement(3970310..3970756)	Alkaliphilus metalliredigens QYMF	5313937
YP_001321631.1	CDS	Amet_3859	NC_009633.1	3973392	3975656	R	PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FMN-binding domain protein; KEGG: dsy:DSY3697 putative fumarate reductase flavoprotein subunit; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein	complement(3973392..3975656)	Alkaliphilus metalliredigens QYMF	5313940
YP_001321632.1	CDS	Amet_3860	NC_009633.1	3975816	3976406	R	PFAM: regulatory protein, TetR; KEGG: cno:NT01CX_0025 transcription regulator (TetR/AcrR family); TetR family transcriptional regulator	complement(3975816..3976406)	Alkaliphilus metalliredigens QYMF	5313941
YP_001321633.1	CDS	Amet_3861	NC_009633.1	3976610	3976747	R	hypothetical protein	complement(3976610..3976747)	Alkaliphilus metalliredigens QYMF	5313942
YP_001321634.1	CDS	Amet_3862	NC_009633.1	3977320	3977922	R	PFAM: regulatory protein, TetR; KEGG: sco:SCO1094 TetR-family regulatory protein; TetR family transcriptional regulator	complement(3977320..3977922)	Alkaliphilus metalliredigens QYMF	5313943
YP_001321635.1	CDS	Amet_3863	NC_009633.1	3978215	3979672	D	PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: dsy:DSY3139 putative fumarate reductase flavoprotein subunit; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein	3978215..3979672	Alkaliphilus metalliredigens QYMF	5313944
YP_001321636.1	CDS	Amet_3864	NC_009633.1	3979949	3980209	R	hypothetical protein	complement(3979949..3980209)	Alkaliphilus metalliredigens QYMF	5313945
YP_001321637.1	CDS	Amet_3865	NC_009633.1	3980374	3981270	R	KEGG: pfa:PFF0660w hypothetical protein; hypothetical protein	complement(3980374..3981270)	Alkaliphilus metalliredigens QYMF	5313946
YP_001321638.1	CDS	Amet_3866	NC_009633.1	3981709	3981921	R	hypothetical protein	complement(3981709..3981921)	Alkaliphilus metalliredigens QYMF	5313947
YP_001321639.1	CDS	Amet_3867	NC_009633.1	3981948	3982457	R	PFAM: ABC transporter related; KEGG: ctc:CTC00915 transporter; ABC transporter-like protein	complement(3981948..3982457)	Alkaliphilus metalliredigens QYMF	5313948
YP_001321640.1	CDS	Amet_3868	NC_009633.1	3982454	3983695	R	PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; KEGG: cno:NT01CX_1433 subtilin biosynthesis sensor protein SpaK; integral membrane sensor signal transduction histidine kinase	complement(3982454..3983695)	Alkaliphilus metalliredigens QYMF	5313949
YP_001321641.1	CDS	Amet_3875	NC_009633.1	3987281	3988210	D	PFAM: regulatory protein, LysR; KEGG: lme:LEUM_1238 fhu operon transcription regulator; LysR family transcriptional regulator	3987281..3988210	Alkaliphilus metalliredigens QYMF	5313956
YP_001321642.1	CDS	Amet_3876	NC_009633.1	3988345	3989715	D	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: fnu:FN0667 Na+ driven multidrug efflux pump; MATE efflux family protein	3988345..3989715	Alkaliphilus metalliredigens QYMF	5313957
YP_001321643.1	CDS	Amet_3881	NC_009633.1	3991472	3993469	R	PFAM: histidine kinase, HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: mta:Moth_1487 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer	complement(3991472..3993469)	Alkaliphilus metalliredigens QYMF	5313962
YP_001321644.1	CDS	Amet_3883	NC_009633.1	3994026	3994325	R	hypothetical protein	complement(3994026..3994325)	Alkaliphilus metalliredigens QYMF	5313964
YP_001321645.1	CDS	Amet_3884	NC_009633.1	3994632	3994757	R	KEGG: swo:Swol_0148 transposase and inactivated derivatives-like protein; hypothetical protein	complement(3994632..3994757)	Alkaliphilus metalliredigens QYMF	5313965
YP_001321646.1	CDS	Amet_3885	NC_009633.1	3994853	3995770	R	KEGG: fnu:FN0872 hypothetical protein; hypothetical protein	complement(3994853..3995770)	Alkaliphilus metalliredigens QYMF	5313966
YP_001321647.1	CDS	Amet_3887	NC_009633.1	3996321	3997586	R	PFAM: major facilitator superfamily MFS_1; KEGG: lin:lin2274 hypothetical protein; major facilitator superfamily transporter	complement(3996321..3997586)	Alkaliphilus metalliredigens QYMF	5313968
YP_001321648.1	CDS	Amet_3889	NC_009633.1	3998833	3999750	R	PFAM: amidohydrolase; KEGG: mta:Moth_0462 amidohydrolase; amidohydrolase	complement(3998833..3999750)	Alkaliphilus metalliredigens QYMF	5313970
YP_001321649.1	CDS	Amet_3891	NC_009633.1	4000467	4001750	R	KEGG: dsy:DSY3881 hypothetical protein; hypothetical protein	complement(4000467..4001750)	Alkaliphilus metalliredigens QYMF	5313972
YP_001321650.1	CDS	Amet_3892	NC_009633.1	4001762	4002568	R	TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: oih:OB3327 hypothetical conserved protein; YaeC family lipoprotein	complement(4001762..4002568)	Alkaliphilus metalliredigens QYMF	5313973
YP_001321651.1	CDS	Amet_3893	NC_009633.1	4002620	4003297	R	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pin:Ping_3537 ABC transporter substrate binding inner membrane protein; binding-protein-dependent transport system inner membrane protein	complement(4002620..4003297)	Alkaliphilus metalliredigens QYMF	5313974
YP_001321652.1	CDS	Amet_3894	NC_009633.1	4003260	4004324	R	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: swo:Swol_2430 hypothetical protein; ABC transporter-like protein	complement(4003260..4004324)	Alkaliphilus metalliredigens QYMF	5313975
YP_001321653.1	CDS	Amet_3895	NC_009633.1	4004566	4005093	R	KEGG: swo:Swol_2198 transposase; transposase	complement(4004566..4005093)	Alkaliphilus metalliredigens QYMF	5313976
YP_001321654.1	CDS	Amet_3897	NC_009633.1	4005412	4006295	D	KEGG: sat:SYN_03180 transposase and inactivated derivatives; hypothetical protein	join(4005412..4005846,4005846..4006295)	Alkaliphilus metalliredigens QYMF	5313978
YP_001321655.1	CDS	Amet_3899	NC_009633.1	4006949	4007803	R	hypothetical protein	complement(4006949..4007803)	Alkaliphilus metalliredigens QYMF	5313980
YP_001321656.1	CDS	Amet_3900	NC_009633.1	4007911	4008726	R	KEGG: llm:llmg_2206 hypothetical protein predicted by Glimmer/Critica; hypothetical protein	complement(4007911..4008726)	Alkaliphilus metalliredigens QYMF	5313981
YP_001321657.1	CDS	Amet_3901	NC_009633.1	4009037	4010407	R	PFAM: peptidase M56, BlaR1; KEGG: dsy:DSY1015 hypothetical protein; peptidase M56, BlaR1	complement(4009037..4010407)	Alkaliphilus metalliredigens QYMF	5313982
YP_001321658.1	CDS	Amet_3902	NC_009633.1	4010412	4010777	R	PFAM: Penicillinase repressor; KEGG: cth:Cthe_3145 transcriptional repressor, CopY family; CopY family transcriptional regulator	complement(4010412..4010777)	Alkaliphilus metalliredigens QYMF	5313983
YP_001321659.1	CDS	Amet_3904	NC_009633.1	4011882	4012700	R	PFAM: ABC-2 type transporter; KEGG: gka:GK0909 ABC transporter (permease); ABC transporter	complement(4011882..4012700)	Alkaliphilus metalliredigens QYMF	5313985
YP_001321660.1	CDS	Amet_3905	NC_009633.1	4012697	4013668	R	TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gka:GK0910 ABC transporter (ATP-binding protein); daunorubicin resistance ABC transporter ATPase subunit	complement(4012697..4013668)	Alkaliphilus metalliredigens QYMF	5313986
YP_001321661.1	CDS	Amet_3906	NC_009633.1	4013890	4014066	R	hypothetical protein	complement(4013890..4014066)	Alkaliphilus metalliredigens QYMF	5313987
YP_001321662.1	CDS	Amet_3907	NC_009633.1	4014108	4014380	R	hypothetical protein	complement(4014108..4014380)	Alkaliphilus metalliredigens QYMF	5313988
YP_001321663.1	CDS	Amet_3908	NC_009633.1	4014516	4014794	R	KEGG: cth:Cthe_0819 ABC transporter related protein; spermidine/putrescine ABC transporter ATPase-like protein	complement(4014516..4014794)	Alkaliphilus metalliredigens QYMF	5313989
YP_001321664.1	CDS	Amet_3909	NC_009633.1	4015081	4015569	R	PFAM: regulatory protein, MarR; KEGG: llm:llmg_1017 transcriptional regulator, MarR family; MarR family transcriptional regulator	complement(4015081..4015569)	Alkaliphilus metalliredigens QYMF	5313990
YP_001321665.1	CDS	Amet_3910	NC_009633.1	4015833	4016012	R	hypothetical protein	complement(4015833..4016012)	Alkaliphilus metalliredigens QYMF	5313991
YP_001321666.1	CDS	Amet_3911	NC_009633.1	4016066	4016458	D	PFAM: IstB domain protein ATP-binding protein; KEGG: llm:llmg_2109 putative transposase helper protein for IS712H; IstB ATP binding domain-containing protein	4016066..4016458	Alkaliphilus metalliredigens QYMF	5313992
YP_001321667.1	CDS	Amet_3912	NC_009633.1	4016692	4017261	R	PFAM: transcriptional regulator PadR family protein; KEGG: cac:CAC0530 hypothetical protein; PadR-like family transcriptional regulator	complement(4016692..4017261)	Alkaliphilus metalliredigens QYMF	5313993
YP_001321668.1	CDS	Amet_3913	NC_009633.1	4017322	4018170	R	PFAM: protein of unknown function DUF303, acetylesterase putative; KEGG: cac:CAC0529 acetylxylan esterase related enzyme; hypothetical protein	complement(4017322..4018170)	Alkaliphilus metalliredigens QYMF	5313994
YP_001321669.1	CDS	Amet_3914	NC_009633.1	4019041	4020356	R	KEGG: pol:Bpro_5089 transposase, IS4; hypothetical protein	complement(join(4019041..4019517,4019517..4020356))	Alkaliphilus metalliredigens QYMF	5313995
YP_001321670.1	CDS	Amet_3916	NC_009633.1	4020745	4021470	R	PFAM: transcription activator, effector binding; KEGG: mlo:mll8212 transcriptional regulator; transcription activator, effector binding	complement(4020745..4021470)	Alkaliphilus metalliredigens QYMF	5313997
YP_001321671.1	CDS	Amet_3917	NC_009633.1	4021884	4022477	D	PFAM: transcriptional regulator PadR family protein; KEGG: dsy:DSY0556 hypothetical protein; PadR-like family transcriptional regulator	4021884..4022477	Alkaliphilus metalliredigens QYMF	5313998
YP_001321672.1	CDS	Amet_3918	NC_009633.1	4022467	4022772	D	KEGG: sus:Acid_3161 palmitoyl-CoA hydrolase; palmitoyl-CoA hydrolase	4022467..4022772	Alkaliphilus metalliredigens QYMF	5313999
YP_001321673.1	CDS	Amet_3919	NC_009633.1	4022907	4024271	D	PFAM: transposase, IS4 family protein; KEGG: wol:WD0563 transposase, IS4 family; transposase, IS4 family protein	4022907..4024271	Alkaliphilus metalliredigens QYMF	5314000
YP_001321674.1	CDS	Amet_3920	NC_009633.1	4024287	4025213	D	PFAM: BAAT/Acyl-CoA thioester hydrolase-like; KEGG: cac:CAC3407 acyl-CoA thioesterase 1; BAAT/Acyl-CoA thioester hydrolase-like protein	4024287..4025213	Alkaliphilus metalliredigens QYMF	5314001
YP_001321675.1	CDS	Amet_3921	NC_009633.1	4025605	4026426	R	hypothetical protein	complement(4025605..4026426)	Alkaliphilus metalliredigens QYMF	5314002
YP_001321676.1	CDS	Amet_3922	NC_009633.1	4026620	4027315	R	KEGG: dsy:DSY0910 hypothetical protein; hypothetical protein	complement(4026620..4027315)	Alkaliphilus metalliredigens QYMF	5314003
YP_001321677.1	CDS	Amet_3923	NC_009633.1	4027363	4028115	R	SMART: helix-turn-helix- domain containing protein, AraC type; KEGG: dsy:DSY0909 hypothetical protein; helix-turn-helix domain-containing protein	complement(4027363..4028115)	Alkaliphilus metalliredigens QYMF	5314004
YP_001321678.1	CDS	Amet_3926	NC_009633.1	4030955	4031593	R	KEGG: dsy:DSY1145 hypothetical protein; hypothetical protein	complement(4030955..4031593)	Alkaliphilus metalliredigens QYMF	5314007
YP_001321679.1	CDS	Amet_3927	NC_009633.1	4031650	4031898	R	hypothetical protein	complement(4031650..4031898)	Alkaliphilus metalliredigens QYMF	5314008
YP_001321680.1	CDS	Amet_3928	NC_009633.1	4032309	4033019	R	hypothetical protein	complement(4032309..4033019)	Alkaliphilus metalliredigens QYMF	5314009
YP_001321681.1	CDS	Amet_3929	NC_009633.1	4033131	4033451	R	hypothetical protein	complement(4033131..4033451)	Alkaliphilus metalliredigens QYMF	5314010
YP_001321682.1	CDS	Amet_3930	NC_009633.1	4033805	4034005	R	hypothetical protein	complement(4033805..4034005)	Alkaliphilus metalliredigens QYMF	5314011
YP_001321683.1	CDS	Amet_3932	NC_009633.1	4034738	4035544	D	PFAM: zinc/iron permease; KEGG: oih:OB2427 zinc transporter, ZIP family; zinc/iron permease	4034738..4035544	Alkaliphilus metalliredigens QYMF	5314013
YP_001321684.1	CDS	Amet_3934	NC_009633.1	4035838	4037088	D	PFAM: Haem peroxidase; KEGG: bha:BH0906 catalase; catalase	4035838..4037088	Alkaliphilus metalliredigens QYMF	5314015
YP_001321685.1	CDS	Amet_3935	NC_009633.1	4037255	4037959	R	SMART: regulatory protein, MerR; KEGG: dsy:DSY3460 hypothetical protein; MerR family transcriptional regulator	complement(4037255..4037959)	Alkaliphilus metalliredigens QYMF	5314016
YP_001321686.1	CDS	Amet_3936	NC_009633.1	4038096	4038872	R	PFAM: ABC-2 type transporter; KEGG: sma:SAV6712 hypothetical protein; ABC transporter	complement(4038096..4038872)	Alkaliphilus metalliredigens QYMF	5314017
YP_001321687.1	CDS	Amet_3937	NC_009633.1	4038908	4039879	R	TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sma:SAV6711 putative ABC transporter ATP-binding protein; daunorubicin resistance ABC transporter ATPase subunit	complement(4038908..4039879)	Alkaliphilus metalliredigens QYMF	5314018
YP_001321688.1	CDS	Amet_3938	NC_009633.1	4040141	4040686	R	KEGG: mxa:MXAN_1647 hypothetical protein; hypothetical protein	complement(4040141..4040686)	Alkaliphilus metalliredigens QYMF	5314019
YP_001321689.1	CDS	Amet_3939	NC_009633.1	4040818	4041558	R	KEGG: btk:BT9727_1620 hypothetical protein; hypothetical protein	complement(4040818..4041558)	Alkaliphilus metalliredigens QYMF	5314020
YP_001321690.1	CDS	Amet_3940	NC_009633.1	4041796	4042653	R	KEGG: dsy:DSY4213 hypothetical protein; hypothetical protein	complement(4041796..4042653)	Alkaliphilus metalliredigens QYMF	5314021
YP_001321691.1	CDS	Amet_3941	NC_009633.1	4043025	4043390	D	PFAM: regulatory protein GntR, HTH; KEGG: oih:OB0429 transcriptional regulator; regulatory protein GntR	4043025..4043390	Alkaliphilus metalliredigens QYMF	5314022
YP_001321692.1	CDS	Amet_3942	NC_009633.1	4043393	4044271	D	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dsy:DSY4854 hypothetical protein; ABC transporter-like protein	4043393..4044271	Alkaliphilus metalliredigens QYMF	5314023
YP_001321693.1	CDS	Amet_3943	NC_009633.1	4044273	4045010	D	KEGG: dsy:DSY4855 hypothetical protein; hypothetical protein	4044273..4045010	Alkaliphilus metalliredigens QYMF	5314024
YP_001321694.1	CDS	Amet_3944	NC_009633.1	4045400	4045744	R	KEGG: chu:CHU_2284 membrane protein; membrane protein	complement(4045400..4045744)	Alkaliphilus metalliredigens QYMF	5314025
YP_001321695.1	CDS	Amet_3945	NC_009633.1	4045759	4046100	R	hypothetical protein	complement(4045759..4046100)	Alkaliphilus metalliredigens QYMF	5314026
YP_001321696.1	CDS	Amet_3946	NC_009633.1	4046090	4046530	R	KEGG: cpf:CPF_0333 hypothetical protein; hypothetical protein	complement(4046090..4046530)	Alkaliphilus metalliredigens QYMF	5314027
YP_001321697.1	CDS	Amet_3947	NC_009633.1	4046557	4046964	R	KEGG: cpf:CPF_0332 hypothetical protein; hypothetical protein	complement(4046557..4046964)	Alkaliphilus metalliredigens QYMF	5314028
YP_001321698.1	CDS	Amet_3948	NC_009633.1	4047292	4048809	R	KEGG: lwe:lwe0773 AAA - ATPase, putative; AAA ATPase	complement(4047292..4048809)	Alkaliphilus metalliredigens QYMF	5314029
YP_001321699.1	CDS	Amet_3952	NC_009633.1	4050608	4050922	R	PFAM: conserved hypothetical protein 1655; KEGG: bld:BLi04148 YxeA; hypothetical protein	complement(4050608..4050922)	Alkaliphilus metalliredigens QYMF	5314033
YP_001321700.1	CDS	Amet_3953	NC_009633.1	4050938	4052860	R	PFAM: protein of unknown function DUF214; KEGG: bld:BLi04210 similar to ABC transporter (permease); RBL02069; hypothetical protein	complement(4050938..4052860)	Alkaliphilus metalliredigens QYMF	5314034
YP_001321701.1	CDS	Amet_3954	NC_009633.1	4052857	4053636	R	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: oih:OB0833 ABC transporter ATP-binding protein; ABC transporter-like protein	complement(4052857..4053636)	Alkaliphilus metalliredigens QYMF	5314035
YP_001321702.1	CDS	Amet_3955	NC_009633.1	4053800	4054837	R	PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; KEGG: bha:BH3912 two-component sensor histidine kinase; integral membrane sensor signal transduction histidine kinase	complement(4053800..4054837)	Alkaliphilus metalliredigens QYMF	5314036
YP_001321703.1	CDS	Amet_3956	NC_009633.1	4054849	4055532	R	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: oih:OB0831 two-component response regulator; two component transcriptional regulator	complement(4054849..4055532)	Alkaliphilus metalliredigens QYMF	5314037
YP_001321704.1	CDS	Amet_3957	NC_009633.1	4055714	4055929	R	PFAM: protein of unknown function DUF1232; KEGG: rme:Rmet_4662 protein of unknown function DUF1275; hypothetical protein	complement(4055714..4055929)	Alkaliphilus metalliredigens QYMF	5314038
YP_001321705.1	CDS	Amet_3958	NC_009633.1	4056402	4056968	R	KEGG: bcl:ABC3146 hypothetical protein; hypothetical protein	complement(4056402..4056968)	Alkaliphilus metalliredigens QYMF	5314039
YP_001321706.1	CDS	Amet_3959	NC_009633.1	4056987	4057391	R	KEGG: bcl:ABC1390 transcriptional regulator; hypothetical protein	complement(4056987..4057391)	Alkaliphilus metalliredigens QYMF	5314040
YP_001321707.1	CDS	Amet_3960	NC_009633.1	4057582	4058031	R	hypothetical protein	complement(4057582..4058031)	Alkaliphilus metalliredigens QYMF	5314041
YP_001321708.1	CDS	Amet_3962	NC_009633.1	4058452	4060761	R	PFAM: protein kinase; SMART: serine/threonine protein kinase; KEGG: cch:Cag_1363 serine/threonine protein kinase; protein kinase	complement(4058452..4060761)	Alkaliphilus metalliredigens QYMF	5314043
YP_001321709.1	CDS	Amet_3963	NC_009633.1	4061174	4061383	R	hypothetical protein	complement(4061174..4061383)	Alkaliphilus metalliredigens QYMF	5314044
YP_001321710.1	CDS	Amet_3964	NC_009633.1	4061367	4061864	R	hypothetical protein	complement(4061367..4061864)	Alkaliphilus metalliredigens QYMF	5314045
YP_001321711.1	CDS	Amet_3965	NC_009633.1	4061901	4062509	R	KEGG: stl:stu0103 hypothetical protein; hypothetical protein	complement(4061901..4062509)	Alkaliphilus metalliredigens QYMF	5314046
YP_001321712.1	CDS	Amet_3966	NC_009633.1	4062521	4064212	R	PFAM: protein of unknown function DUF262; KEGG: cpr:CPR_0892 hypothetical protein; hypothetical protein	complement(4062521..4064212)	Alkaliphilus metalliredigens QYMF	5314047
YP_001321713.1	CDS	Amet_3967	NC_009633.1	4064215	4064736	R	hypothetical protein	complement(4064215..4064736)	Alkaliphilus metalliredigens QYMF	5314048
YP_001321714.1	CDS	Amet_3969	NC_009633.1	4065904	4066752	D	PFAM: Relaxase/mobilization nuclease family protein; KEGG: spi:MGAS10750_Spy1708 relaxase; relaxase/mobilization nuclease family protein	4065904..4066752	Alkaliphilus metalliredigens QYMF	5314050
YP_001321715.1	CDS	Amet_3970	NC_009633.1	4066822	4068375	D	PFAM: Integrase, catalytic region; KEGG: bha:BH3965 transposase (22); integrase catalytic subunit	4066822..4068375	Alkaliphilus metalliredigens QYMF	5314051
YP_001321716.1	CDS	Amet_3971	NC_009633.1	4068363	4069106	D	PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: dsy:DSY0836 hypothetical protein; IstB ATP binding domain-containing protein	4068363..4069106	Alkaliphilus metalliredigens QYMF	5314052
YP_001321717.1	CDS	Amet_3972	NC_009633.1	4069110	4069319	D	hypothetical protein	4069110..4069319	Alkaliphilus metalliredigens QYMF	5314053
YP_001321718.1	CDS	Amet_3974	NC_009633.1	4070022	4070492	R	KEGG: spj:MGAS2096_Spy1123 hypothetical protein; hypothetical protein	complement(4070022..4070492)	Alkaliphilus metalliredigens QYMF	5314055
YP_001321719.1	CDS	Amet_3975	NC_009633.1	4070750	4073707	R	PFAM: SMC domain protein; KEGG: fnu:FN0522 exonuclease SBCC; SMC domain-containing protein	complement(4070750..4073707)	Alkaliphilus metalliredigens QYMF	5314056
YP_001321720.1	CDS	Amet_3976	NC_009633.1	4073704	4074288	R	hypothetical protein	complement(4073704..4074288)	Alkaliphilus metalliredigens QYMF	5314057
YP_001321721.1	CDS	Amet_3977	NC_009633.1	4074285	4076171	R	hypothetical protein	complement(4074285..4076171)	Alkaliphilus metalliredigens QYMF	5314058
YP_001321722.1	CDS	Amet_3978	NC_009633.1	4076457	4077236	R	KEGG: spi:MGAS10750_Spy1695 hypothetical protein; hypothetical protein	complement(4076457..4077236)	Alkaliphilus metalliredigens QYMF	5314059
YP_001321723.1	CDS	Amet_3979	NC_009633.1	4077229	4077468	R	hypothetical protein	complement(4077229..4077468)	Alkaliphilus metalliredigens QYMF	5314060
YP_001321724.1	CDS	Amet_3980	NC_009633.1	4077498	4078811	R	PFAM: peptidase M23B; KEGG: efa:EF2318 peptidase, M23/M37 family; peptidase M23B	complement(4077498..4078811)	Alkaliphilus metalliredigens QYMF	5314061
YP_001321725.1	CDS	Amet_3981	NC_009633.1	4078893	4079423	R	KEGG: mmu:677347 hypothetical protein LOC677347; hypothetical protein	complement(4078893..4079423)	Alkaliphilus metalliredigens QYMF	5314062
YP_001321726.1	CDS	Amet_3983	NC_009633.1	4081843	4082256	R	KEGG: efa:EF2321 hypothetical protein; hypothetical protein	complement(4081843..4082256)	Alkaliphilus metalliredigens QYMF	5314064
YP_001321727.1	CDS	Amet_3984	NC_009633.1	4082269	4083138	R	KEGG: efa:EF2324 hypothetical protein; hypothetical protein	complement(4082269..4083138)	Alkaliphilus metalliredigens QYMF	5314065
YP_001321728.1	CDS	Amet_3986	NC_009633.1	4083530	4084306	R	hypothetical protein	complement(4083530..4084306)	Alkaliphilus metalliredigens QYMF	5314067
YP_001321729.1	CDS	Amet_3987	NC_009633.1	4084309	4085145	R	hypothetical protein	complement(4084309..4085145)	Alkaliphilus metalliredigens QYMF	5314068
YP_001321730.1	CDS	Amet_3988	NC_009633.1	4085344	4086234	R	KEGG: hch:HCH_05640 hypothetical protein; hypothetical protein	complement(4085344..4086234)	Alkaliphilus metalliredigens QYMF	5314069
YP_001321731.1	CDS	Amet_3989	NC_009633.1	4086486	4087127	R	hypothetical protein	complement(4086486..4087127)	Alkaliphilus metalliredigens QYMF	5314070
YP_001321732.1	CDS	Amet_3991	NC_009633.1	4089066	4089563	R	KEGG: efa:EF2329 hypothetical protein; hypothetical protein	complement(4089066..4089563)	Alkaliphilus metalliredigens QYMF	5314072
YP_001321733.1	CDS	Amet_3992	NC_009633.1	4089620	4090579	R	PFAM: replication initiator A domain protein; KEGG: efa:EF2334 hypothetical protein; replication initiator A domain-containing protein	complement(4089620..4090579)	Alkaliphilus metalliredigens QYMF	5314073
YP_001321734.1	CDS	Amet_3993	NC_009633.1	4090586	4091545	R	PFAM: ParB domain protein nuclease; KEGG: ctc:CTC01936 chromosome partitioning parB family protein; nuclease	complement(4090586..4091545)	Alkaliphilus metalliredigens QYMF	5314074
YP_001321735.1	CDS	Amet_3994	NC_009633.1	4091532	4092320	R	PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: ctc:CTC01937 sporulation initiation inhibitor soj family protein; cobyrinic acid a,c-diamide synthase	complement(4091532..4092320)	Alkaliphilus metalliredigens QYMF	5314075
YP_001321736.1	CDS	Amet_3995	NC_009633.1	4092392	4092502	R	hypothetical protein	complement(4092392..4092502)	Alkaliphilus metalliredigens QYMF	5314076
YP_001321737.1	CDS	Amet_3996	NC_009633.1	4092843	4093907	R	TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: cth:Cthe_1111 bile acid:sodium symporter; arsenical-resistance protein	complement(4092843..4093907)	Alkaliphilus metalliredigens QYMF	5314077
YP_001321738.1	CDS	Amet_3997	NC_009633.1	4094016	4095926	R	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: gka:GK0585 cadmium-transporting ATPase; heavy metal translocating P-type ATPase	complement(4094016..4095926)	Alkaliphilus metalliredigens QYMF	5314078
YP_001321739.1	CDS	Amet_3998	NC_009633.1	4096055	4096213	R	hypothetical protein	complement(4096055..4096213)	Alkaliphilus metalliredigens QYMF	5314079
YP_001321740.1	CDS	Amet_3999	NC_009633.1	4096290	4096628	R	PFAM: regulatory protein, ArsR; KEGG: cth:Cthe_1112 transcriptional regulator, ArsR family; regulatory protein ArsR	complement(4096290..4096628)	Alkaliphilus metalliredigens QYMF	5314080
YP_001321741.1	CDS	Amet_4000	NC_009633.1	4096843	4097322	R	KEGG: tte:TTE2462 hypothetical protein; hypothetical protein	complement(4096843..4097322)	Alkaliphilus metalliredigens QYMF	5314081
YP_001321742.1	CDS	Amet_4001	NC_009633.1	4097350	4097490	R	hypothetical protein	complement(4097350..4097490)	Alkaliphilus metalliredigens QYMF	5314082
YP_001321743.1	CDS	Amet_4002	NC_009633.1	4097536	4099122	R	hypothetical protein	complement(4097536..4099122)	Alkaliphilus metalliredigens QYMF	5314083
YP_001321744.1	CDS	Amet_4003	NC_009633.1	4099151	4099828	R	hypothetical protein	complement(4099151..4099828)	Alkaliphilus metalliredigens QYMF	5314084
YP_001321745.1	CDS	Amet_4004	NC_009633.1	4099844	4100068	R	SMART: helix-turn-helix domain protein; KEGG: cth:Cthe_1750 hypothetical protein; helix-turn-helix domain-containing protein	complement(4099844..4100068)	Alkaliphilus metalliredigens QYMF	5314085
YP_001321746.1	CDS	Amet_4005	NC_009633.1	4100212	4101774	R	PFAM: Resolvase, N-terminal domain; Recombinase; KEGG: bca:BCE_0419 DNA recombinase, putative; resolvase domain-containing protein	complement(4100212..4101774)	Alkaliphilus metalliredigens QYMF	5314086
YP_001321747.1	CDS	Amet_4006	NC_009633.1	4101776	4102192	R	PFAM: Recombinase; KEGG: bca:BCE_0418 hypothetical protein; recombinase	complement(4101776..4102192)	Alkaliphilus metalliredigens QYMF	5314087
YP_001321748.1	CDS	Amet_4007	NC_009633.1	4102193	4103758	R	PFAM: Resolvase, N-terminal domain; Recombinase; KEGG: bca:BCE_0417 DNA recombinase, putative; resolvase domain-containing protein	complement(4102193..4103758)	Alkaliphilus metalliredigens QYMF	5314088
YP_001321749.1	CDS	Amet_4008	NC_009633.1	4103820	4104125	R	KEGG: bca:BCE_0416 hypothetical protein; hypothetical protein	complement(4103820..4104125)	Alkaliphilus metalliredigens QYMF	5314089
YP_001321750.1	CDS	Amet_4009	NC_009633.1	4104091	4106040	R	PFAM: DNA-directed DNA polymerase; KEGG: bca:BCE_0377 DNA polymerase I; DNA-directed DNA polymerase	complement(4104091..4106040)	Alkaliphilus metalliredigens QYMF	5314090
YP_001321751.1	CDS	Amet_4010	NC_009633.1	4106028	4106537	R	PFAM: NUMOD4 domain protein; KEGG: sav:SAV0865 hypothetical protein; NUMOD4 domain-containing protein	complement(4106028..4106537)	Alkaliphilus metalliredigens QYMF	5314091
YP_001321752.1	CDS	Amet_4011	NC_009633.1	4106611	4107162	R	KEGG: bca:BCE_0376 hypothetical protein; hypothetical protein	complement(4106611..4107162)	Alkaliphilus metalliredigens QYMF	5314092
YP_001321753.1	CDS	Amet_4012	NC_009633.1	4107168	4108304	R	KEGG: bca:BCE_0375 hypothetical protein; hypothetical protein	complement(4107168..4108304)	Alkaliphilus metalliredigens QYMF	5314093
YP_001321754.1	CDS	Amet_4013	NC_009633.1	4108297	4108620	R	KEGG: bca:BCE_0374 rRNA biogenesis protein rrp5, putative; rRNA biogenesis protein rrp5	complement(4108297..4108620)	Alkaliphilus metalliredigens QYMF	5314094
YP_001321755.1	CDS	Amet_4014	NC_009633.1	4108589	4108813	R	KEGG: bca:BCE_0373 hypothetical protein; hypothetical protein	complement(4108589..4108813)	Alkaliphilus metalliredigens QYMF	5314095
YP_001321756.1	CDS	Amet_4015	NC_009633.1	4108950	4109639	R	PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; Sporulation domain protein; KEGG: bca:BCE_0415 N-acetylmuramoyl-L-alanine amidase domain protein; N-acetylmuramoyl-L-alanine amidase	complement(4108950..4109639)	Alkaliphilus metalliredigens QYMF	5314096
YP_001321757.1	CDS	Amet_4016	NC_009633.1	4109668	4110084	R	TIGRFAM: toxin secretion/phage lysis holin; PFAM: Holin, toxin secretion/phage lysis; KEGG: cth:Cthe_1612 toxin secretion/phage lysis holin; toxin secretion/phage lysis holin	complement(4109668..4110084)	Alkaliphilus metalliredigens QYMF	5314097
YP_001321758.1	CDS	Amet_4017	NC_009633.1	4110168	4111241	R	hypothetical protein	complement(4110168..4111241)	Alkaliphilus metalliredigens QYMF	5314098
YP_001321759.1	CDS	Amet_4018	NC_009633.1	4111253	4112380	R	hypothetical protein	complement(4111253..4112380)	Alkaliphilus metalliredigens QYMF	5314099
YP_001321760.1	CDS	Amet_4019	NC_009633.1	4112399	4114669	R	KEGG: cth:Cthe_1618 hypothetical protein; hypothetical protein	complement(4112399..4114669)	Alkaliphilus metalliredigens QYMF	5314100
YP_001321761.1	CDS	Amet_4020	NC_009633.1	4114734	4114853	R	KEGG: cth:Cthe_1621 hypothetical protein; hypothetical protein	complement(4114734..4114853)	Alkaliphilus metalliredigens QYMF	5314101
YP_001321762.1	CDS	Amet_4021	NC_009633.1	4114922	4115332	R	KEGG: cth:Cthe_1622 hypothetical protein; hypothetical protein	complement(4114922..4115332)	Alkaliphilus metalliredigens QYMF	5314102
YP_001321763.1	CDS	Amet_4022	NC_009633.1	4115347	4116228	R	TIGRFAM: phage major tail protein, phi13 family; KEGG: bca:BCE_0406 phage major tail protein, phi13 family subfamily; phi13 family phage major tail protein	complement(4115347..4116228)	Alkaliphilus metalliredigens QYMF	5314103
YP_001321764.1	CDS	Amet_4023	NC_009633.1	4116229	4116573	R	KEGG: cth:Cthe_1624 hypothetical protein; hypothetical protein	complement(4116229..4116573)	Alkaliphilus metalliredigens QYMF	5314104
YP_001321765.1	CDS	Amet_4024	NC_009633.1	4116570	4117001	R	TIGRFAM: phage protein, HK97 gp10 family; KEGG: cth:Cthe_1625 phage protein, HK97 GP10 family; HK97 family phage protein	complement(4116570..4117001)	Alkaliphilus metalliredigens QYMF	5314105
YP_001321766.1	CDS	Amet_4025	NC_009633.1	4116994	4117326	R	TIGRFAM: phage head-tail adaptor, putative; KEGG: bca:BCE_0403 phage head-tail adaptor, putative; phage head-tail adaptor	complement(4116994..4117326)	Alkaliphilus metalliredigens QYMF	5314106
YP_001321767.1	CDS	Amet_4026	NC_009633.1	4117329	4117637	R	TIGRFAM: uncharacterized phage protein (possible DNA packaging); KEGG: cth:Cthe_1627 uncharacterized phage protein; phage protein	complement(4117329..4117637)	Alkaliphilus metalliredigens QYMF	5314107
YP_001321768.1	CDS	Amet_4027	NC_009633.1	4117656	4117868	R	KEGG: bca:BCE_0401 hypothetical protein; hypothetical protein	complement(4117656..4117868)	Alkaliphilus metalliredigens QYMF	5314108
YP_001321769.1	CDS	Amet_4028	NC_009633.1	4117881	4119089	R	TIGRFAM: phage major capsid protein, HK97 family; PFAM: phage major capsid protein, HK97; KEGG: bca:BCE_0400 phage major capsid protein, HK97 family; HK97 family phage major capsid protein	complement(4117881..4119089)	Alkaliphilus metalliredigens QYMF	5314109
YP_001321770.1	CDS	Amet_4029	NC_009633.1	4119109	4119807	R	PFAM: peptidase S14, ClpP; KEGG: cth:Cthe_1629 peptidase S14, ClpP; peptidase S14, ClpP	complement(4119109..4119807)	Alkaliphilus metalliredigens QYMF	5314110
YP_001321771.1	CDS	Amet_4030	NC_009633.1	4119807	4121066	R	TIGRFAM: phage portal protein, HK97 family; PFAM: phage portal protein; KEGG: det:DET1087 portal protein, HK97 family, putative; HK97 family phage portal protein	complement(4119807..4121066)	Alkaliphilus metalliredigens QYMF	5314111
YP_001321772.1	CDS	Amet_4031	NC_009633.1	4121137	4121547	R	hypothetical protein	complement(4121137..4121547)	Alkaliphilus metalliredigens QYMF	5314112
YP_001321773.1	CDS	Amet_4032	NC_009633.1	4121598	4121996	R	hypothetical protein	complement(4121598..4121996)	Alkaliphilus metalliredigens QYMF	5314113
YP_001321774.1	CDS	Amet_4033	NC_009633.1	4122082	4123647	R	PFAM: phage Terminase; KEGG: bca:BCE_0397 phage terminase, large subunit, putative; phage terminase	complement(4122082..4123647)	Alkaliphilus metalliredigens QYMF	5314114
YP_001321775.1	CDS	Amet_4034	NC_009633.1	4123790	4124014	R	hypothetical protein	complement(4123790..4124014)	Alkaliphilus metalliredigens QYMF	5314115
YP_001321776.1	CDS	Amet_4035	NC_009633.1	4124029	4124385	R	KEGG: pac:PPA1584 hypothetical protein; hypothetical protein	complement(4124029..4124385)	Alkaliphilus metalliredigens QYMF	5314116
YP_001321777.1	CDS	Amet_4036	NC_009633.1	4124496	4124807	R	KEGG: cth:Cthe_1725 hypothetical protein; hypothetical protein	complement(4124496..4124807)	Alkaliphilus metalliredigens QYMF	5314117
YP_001321778.1	CDS	Amet_4037	NC_009633.1	4124810	4125052	R	KEGG: det:DET1090 hypothetical protein; hypothetical protein	complement(4124810..4125052)	Alkaliphilus metalliredigens QYMF	5314118
YP_001321779.1	CDS	Amet_4038	NC_009633.1	4125036	4125710	R	KEGG: det:DET0065 virulence-related protein; virulence-like protein	complement(4125036..4125710)	Alkaliphilus metalliredigens QYMF	5314119
YP_001321780.1	CDS	Amet_4039	NC_009633.1	4125793	4127028	R	PFAM: DNA methylase N-4/N-6 domain protein; ParB domain protein nuclease; KEGG: bca:BCE_0392 DNA methylase, family protein; DNA methylase N-4/N-6 domain-containing protein	complement(4125793..4127028)	Alkaliphilus metalliredigens QYMF	5314120
YP_001321781.1	CDS	Amet_4040	NC_009633.1	4127025	4128206	R	catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase	complement(4127025..4128206)	Alkaliphilus metalliredigens QYMF	5314121
YP_001321782.1	CDS	Amet_4041	NC_009633.1	4128228	4128779	R	KEGG: bca:BCE_0390 hypothetical protein; hypothetical protein	complement(4128228..4128779)	Alkaliphilus metalliredigens QYMF	5314122
YP_001321783.1	CDS	Amet_4042	NC_009633.1	4128870	4129244	R	PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: det:DET0069 HNH endonuclease domain protein; HNH endonuclease	complement(4128870..4129244)	Alkaliphilus metalliredigens QYMF	5314123
YP_001321784.1	CDS	Amet_4043	NC_009633.1	4129376	4130014	R	KEGG: lin:lin2582 hypothetical protein; hypothetical protein	complement(4129376..4130014)	Alkaliphilus metalliredigens QYMF	5314124
YP_001321785.1	CDS	Amet_4044	NC_009633.1	4130001	4130438	R	KEGG: det:DET0070 hypothetical protein; hypothetical protein	complement(4130001..4130438)	Alkaliphilus metalliredigens QYMF	5314125
YP_001321786.1	CDS	Amet_4045	NC_009633.1	4130435	4130656	R	KEGG: bca:BCE_0387 hypothetical protein; hypothetical protein	complement(4130435..4130656)	Alkaliphilus metalliredigens QYMF	5314126
YP_001321787.1	CDS	Amet_4046	NC_009633.1	4130653	4131897	R	KEGG: bca:BCE_0386 phage-associated helicase; phage-associated helicase	complement(4130653..4131897)	Alkaliphilus metalliredigens QYMF	5314127
YP_001321788.1	CDS	Amet_4047	NC_009633.1	4132007	4132516	R	PFAM: HNH endonuclease; KEGG: cth:Cthe_1703 HNH endonuclease; HNH endonuclease	complement(4132007..4132516)	Alkaliphilus metalliredigens QYMF	5314128
YP_001321789.1	CDS	Amet_4048	NC_009633.1	4132494	4132778	R	PFAM: VRR_NUC domain protein; KEGG: bca:BCE_0385 phage protein, putative; VRR_NUC domain-containing protein	complement(4132494..4132778)	Alkaliphilus metalliredigens QYMF	5314129
YP_001321790.1	CDS	Amet_4049	NC_009633.1	4132929	4135277	R	PFAM: virulence-associated E family protein; KEGG: det:DET1098 virulence-associated protein E, putative; virulence-associated E family protein	complement(4132929..4135277)	Alkaliphilus metalliredigens QYMF	5314130
YP_001321791.1	CDS	Amet_4050	NC_009633.1	4135347	4135778	R	KEGG: bca:BCE_0383 hypothetical protein; hypothetical protein	complement(4135347..4135778)	Alkaliphilus metalliredigens QYMF	5314131
YP_001321792.1	CDS	Amet_4051	NC_009633.1	4135765	4135986	R	hypothetical protein	complement(4135765..4135986)	Alkaliphilus metalliredigens QYMF	5314132
YP_001321793.1	CDS	Amet_4052	NC_009633.1	4136001	4136663	R	TIGRFAM: Phage regulatory protein, Rha family; KEGG: pmu:PM1774 rha protein, phage phi-80; Rha family phage regulatory protein	complement(4136001..4136663)	Alkaliphilus metalliredigens QYMF	5314133
YP_001321794.1	CDS	Amet_4053	NC_009633.1	4136728	4137255	R	KEGG: bca:BCE_0372 hypothetical protein; hypothetical protein	complement(4136728..4137255)	Alkaliphilus metalliredigens QYMF	5314134
YP_001321795.1	CDS	Amet_4054	NC_009633.1	4137626	4139212	R	KEGG: cth:Cthe_1654 hypothetical protein; hypothetical protein	complement(4137626..4139212)	Alkaliphilus metalliredigens QYMF	5314135
YP_001321796.1	CDS	Amet_4055	NC_009633.1	4139187	4139939	R	PFAM: protein of unknown function DUF45; KEGG: tde:TDE0365 hypothetical protein; hypothetical protein	complement(4139187..4139939)	Alkaliphilus metalliredigens QYMF	5314136
YP_001321797.1	CDS	Amet_4056	NC_009633.1	4139932	4143057	R	TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: type III restriction protein, res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases-like; KEGG: pcr:Pcryo_0948 type I site-specific deoxyribonuclease, HsdR family; HsdR family type I site-specific deoxyribonuclease	complement(4139932..4143057)	Alkaliphilus metalliredigens QYMF	5314137
YP_001321798.1	CDS	Amet_4057	NC_009633.1	4143071	4144222	R	PFAM: restriction modification system DNA specificity domain; KEGG: mma:MM2293 type I restriction-modification system specificity subunit; restriction modification system DNA specificity subunit	complement(4143071..4144222)	Alkaliphilus metalliredigens QYMF	5314138
YP_001321799.1	CDS	Amet_4058	NC_009633.1	4144216	4146909	R	PFAM: N-6 DNA methylase; KEGG: tde:TDE0369 type I restriction-modification system, M subunit; N-6 DNA methylase	complement(4144216..4146909)	Alkaliphilus metalliredigens QYMF	5314139
YP_001321800.1	CDS	Amet_4059	NC_009633.1	4146941	4147153	R	hypothetical protein	complement(4146941..4147153)	Alkaliphilus metalliredigens QYMF	5314140
YP_001321801.1	CDS	Amet_4060	NC_009633.1	4147472	4148830	R	TIGRFAM: RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; protein of unknown function Met10; (Uracil-5)-methyltransferase; KEGG: bca:BCE_0363 RNA methyltransferase, TrmA family; RNA methyltransferase	complement(4147472..4148830)	Alkaliphilus metalliredigens QYMF	5314141
YP_001321802.1	CDS	Amet_4061	NC_009633.1	4149073	4150359	D	hypothetical protein	4149073..4150359	Alkaliphilus metalliredigens QYMF	5314142
YP_001321803.1	CDS	Amet_4062	NC_009633.1	4150523	4151530	R	PFAM: aldo/keto reductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: chy:CHY_1118 oxidoreductase, aldo/keto reductase family; aldo/keto reductase	complement(4150523..4151530)	Alkaliphilus metalliredigens QYMF	5314143
YP_001321804.1	CDS	Amet_4063	NC_009633.1	4151551	4151946	R	PFAM: FxsA cytoplasmic membrane protein; KEGG: bha:BH3162 hypothetical protein; FxsA cytoplasmic membrane protein	complement(4151551..4151946)	Alkaliphilus metalliredigens QYMF	5314144
YP_001321805.1	CDS	Amet_4064	NC_009633.1	4152144	4152599	R	PFAM: thioesterase superfamily protein; KEGG: cth:Cthe_1260 4-hydroxybenzoyl-CoA thioesterase; thioesterase superfamily protein	complement(4152144..4152599)	Alkaliphilus metalliredigens QYMF	5314145
YP_001321806.1	CDS	Amet_4065	NC_009633.1	4152753	4152989	R	KEGG: cth:Cthe_0431 hypothetical protein; hypothetical protein	complement(4152753..4152989)	Alkaliphilus metalliredigens QYMF	5314146
YP_001321807.1	CDS	Amet_4066	NC_009633.1	4153079	4154251	R	PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: tte:TTE0698 hypothetical protein; stage II sporulation E family protein	complement(4153079..4154251)	Alkaliphilus metalliredigens QYMF	5314147
YP_001321808.1	CDS	Amet_4067	NC_009633.1	4154251	4155960	R	TIGRFAM: PAS sensor protein; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; hydrogenase large subunit domain protein; Fe-S cluster domain protein; KEGG: tte:TTE0697 ferredoxin 2; putative PAS/PAC sensor protein	complement(4154251..4155960)	Alkaliphilus metalliredigens QYMF	5314148
YP_001321809.1	CDS	Amet_4068	NC_009633.1	4156252	4158012	R	TIGRFAM: pyruvate kinase; PFAM: PEP-utilising protein, mobile region; Pyruvate kinase, barrel; Pyruvate kinase, alpha/beta; KEGG: tte:TTE1815 pyruvate kinase; pyruvate kinase	complement(4156252..4158012)	Alkaliphilus metalliredigens QYMF	5314149
YP_001321810.1	CDS	Amet_4069	NC_009633.1	4158029	4158988	R	catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis; 6-phosphofructokinase	complement(4158029..4158988)	Alkaliphilus metalliredigens QYMF	5314150
YP_001321811.1	CDS	Amet_4070	NC_009633.1	4159083	4159274	R	KEGG: cth:Cthe_1262 hypothetical protein; hypothetical protein	complement(4159083..4159274)	Alkaliphilus metalliredigens QYMF	5314151
YP_001321812.1	CDS	dnaE	NC_009633.1	4159662	4163129	R	catalyzes DNA-template-directed extension of the 3'-end of a DNA strand by one nucleotide at a time. Proposed to be responsible for the synthesis of the lagging strand. In the low GC gram positive bacteria this enzyme is less processive and more error prone than its counterpart in other bacteria.; DNA polymerase III DnaE	complement(4159662..4163129)	Alkaliphilus metalliredigens QYMF	5314152
YP_001321813.1	CDS	Amet_4072	NC_009633.1	4163135	4166068	R	PFAM: transcriptional activator domain; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ctc:CTC02319 serine/threonine kinase, putative regulatory protein; transcriptional activator domain-containing protein	complement(4163135..4166068)	Alkaliphilus metalliredigens QYMF	5314153
YP_001321814.1	CDS	Amet_4073	NC_009633.1	4166228	4167124	R	TIGRFAM: glutamate formiminotransferase; PFAM: Formiminotransferase domain protein; Formiminotransferase-like; KEGG: pgi:PG0329 formiminotransferase-cyclodeaminase-related protein; glutamate formiminotransferase	complement(4166228..4167124)	Alkaliphilus metalliredigens QYMF	5314154
YP_001321815.1	CDS	Amet_4074	NC_009633.1	4167153	4169180	R	catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism; urocanate hydratase	complement(4167153..4169180)	Alkaliphilus metalliredigens QYMF	5314155
YP_001321816.1	CDS	Amet_4075	NC_009633.1	4169402	4170067	D	KEGG: bce:BC0021 deoxyguanosine kinase; deoxyguanosine kinase	4169402..4170067	Alkaliphilus metalliredigens QYMF	5314156
YP_001321817.1	CDS	Amet_4076	NC_009633.1	4170061	4170750	D	PFAM: deoxynucleoside kinase; KEGG: oih:OB0015 deoxypurine kinase subunit; deoxynucleoside kinase	4170061..4170750	Alkaliphilus metalliredigens QYMF	5314157
YP_001321818.1	CDS	Amet_4077	NC_009633.1	4170837	4171307	R	hypothetical protein	complement(4170837..4171307)	Alkaliphilus metalliredigens QYMF	5314158
YP_001321819.1	CDS	Amet_4078	NC_009633.1	4171476	4172003	R	hypothetical protein	complement(4171476..4172003)	Alkaliphilus metalliredigens QYMF	5314159
YP_001321820.1	CDS	Amet_4079	NC_009633.1	4172066	4172275	R	hypothetical protein	complement(4172066..4172275)	Alkaliphilus metalliredigens QYMF	5314160
YP_001321821.1	CDS	Amet_4080	NC_009633.1	4172279	4173022	R	PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: dsy:DSY0836 hypothetical protein; IstB ATP binding domain-containing protein	complement(4172279..4173022)	Alkaliphilus metalliredigens QYMF	5314161
YP_001321822.1	CDS	Amet_4081	NC_009633.1	4173010	4174563	R	PFAM: Integrase, catalytic region; KEGG: bha:BH3965 transposase (22); integrase catalytic subunit	complement(4173010..4174563)	Alkaliphilus metalliredigens QYMF	5314162
YP_001321823.1	CDS	Amet_4082	NC_009633.1	4174633	4175313	R	PFAM: copper amine oxidase domain protein; copper amine oxidase domain-containing protein	complement(4174633..4175313)	Alkaliphilus metalliredigens QYMF	5314163
YP_001321824.1	CDS	Amet_4083	NC_009633.1	4175651	4176262	D	SMART: Accessory gene regulator B; KEGG: dsy:DSY2528 hypothetical protein; accessory gene regulator B	4175651..4176262	Alkaliphilus metalliredigens QYMF	5314164
YP_001321825.1	CDS	Amet_4084	NC_009633.1	4177199	4178053	R	KEGG: art:Arth_4398 hypothetical protein; hypothetical protein	complement(4177199..4178053)	Alkaliphilus metalliredigens QYMF	5314165
YP_001321826.1	CDS	Amet_4086	NC_009633.1	4179489	4180751	R	PFAM: ATP-binding region, ATPase domain protein; KEGG: swo:Swol_2401 signal transduction histidine kinase regulating citrate/malate metabolism; signal transduction histidine kinase regulating citrate/malate metabolism	complement(4179489..4180751)	Alkaliphilus metalliredigens QYMF	5314167
YP_001321827.1	CDS	Amet_4087	NC_009633.1	4180775	4181494	R	PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: tte:TTE0561 response regulators of cell autolysis; LytTR family two component transcriptional regulator	complement(4180775..4181494)	Alkaliphilus metalliredigens QYMF	5314168
YP_001321828.1	CDS	Amet_4088	NC_009633.1	4181662	4182615	R	PFAM: protein of unknown function DUF199; KEGG: cac:CAC0513 uncharacterized conserved protein, similar to B.subtilis YvcL; hypothetical protein	complement(4181662..4182615)	Alkaliphilus metalliredigens QYMF	5314169
YP_001321829.1	CDS	Amet_4089	NC_009633.1	4182730	4182891	D	PFAM: protein of unknown function DUF1540; hypothetical protein	4182730..4182891	Alkaliphilus metalliredigens QYMF	5314170
YP_001321830.1	CDS	Amet_4090	NC_009633.1	4182922	4183344	R	PFAM: NUDIX hydrolase; KEGG: aae:aq_158 AP4A hydrolase; NUDIX hydrolase	complement(4182922..4183344)	Alkaliphilus metalliredigens QYMF	5314171
YP_001321831.1	CDS	Amet_4091	NC_009633.1	4183818	4185107	R	PFAM: protein of unknown function UPF0052 and CofD; KEGG: cno:NT01CX_1285 hypothetical UPF0052 protein; hypothetical protein	complement(4183818..4185107)	Alkaliphilus metalliredigens QYMF	5314172
YP_001321832.1	CDS	Amet_4092	NC_009633.1	4185155	4186033	R	PFAM: uncharacterised P-loop ATPase protein UPF0042; KEGG: ctc:CTC02495 hypothetical protein; hypothetical protein	complement(4185155..4186033)	Alkaliphilus metalliredigens QYMF	5314173
YP_001321833.1	CDS	murB	NC_009633.1	4186075	4186989	R	catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase	complement(4186075..4186989)	Alkaliphilus metalliredigens QYMF	5314174
YP_001321834.1	CDS	Amet_4094	NC_009633.1	4187188	4188543	R	PFAM: extracellular solute-binding protein, family 1; KEGG: tte:TTE1917 sugar-binding periplasmic proteins/domains; extracellular solute-binding protein	complement(4187188..4188543)	Alkaliphilus metalliredigens QYMF	5314175
YP_001321835.1	CDS	Amet_4095	NC_009633.1	4188637	4189047	R	KEGG: chy:CHY_0804 MOSC domain protein; hypothetical protein	complement(4188637..4189047)	Alkaliphilus metalliredigens QYMF	5314176
YP_001321836.1	CDS	Amet_4096	NC_009633.1	4189051	4190013	R	TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM domain protein; molybdenum cofactor synthesis domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: dsy:DSY3488 hypothetical protein; molybdenum cofactor biosynthesis protein A	complement(4189051..4190013)	Alkaliphilus metalliredigens QYMF	5314177
YP_001321837.1	CDS	Amet_4097	NC_009633.1	4190412	4190909	D	PFAM: Rubrerythrin; KEGG: tko:TK1056 rubrerythrin-related protein; rubrerythrin	4190412..4190909	Alkaliphilus metalliredigens QYMF	5314178
YP_001321838.1	CDS	Amet_4098	NC_009633.1	4191038	4192624	R	PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: ppd:Ppro_3520 formate dehydrogenase, alpha subunit; molybdopterin oxidoreductase	complement(4191038..4192624)	Alkaliphilus metalliredigens QYMF	5314179
YP_001321839.1	CDS	Amet_4099	NC_009633.1	4192673	4193719	R	PFAM: ferredoxin; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; molybdopterin oxidoreductase Fe4S4 region; KEGG: ppd:Ppro_3520 formate dehydrogenase, alpha subunit; molybdopterin oxidoreductase Fe4S4 region	complement(4192673..4193719)	Alkaliphilus metalliredigens QYMF	5314180
YP_001321840.1	CDS	Amet_4100	NC_009633.1	4193735	4195531	R	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: cth:Cthe_0341 NADH dehydrogenase (quinone); NADH dehydrogenase (quinone)	complement(4193735..4195531)	Alkaliphilus metalliredigens QYMF	5314181
YP_001321841.1	CDS	Amet_4101	NC_009633.1	4195601	4195960	R	KEGG: cth:Cthe_0340 ferredoxin; ferredoxin	complement(4195601..4195960)	Alkaliphilus metalliredigens QYMF	5314182
YP_001321842.1	CDS	Amet_4102	NC_009633.1	4196005	4196484	R	PFAM: NADH dehydrogenase (ubiquinone), 24 kDa subunit; KEGG: cth:Cthe_0338 NADH-quinone oxidoreductase, E subunit; NADH dehydrogenase (ubiquinone), 24 kDa subunit	complement(4196005..4196484)	Alkaliphilus metalliredigens QYMF	5314183
YP_001321843.1	CDS	Amet_4103	NC_009633.1	4197116	4198315	R	TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; Miro domain protein; KEGG: swo:Swol_0318 small GTP-binding protein domain; small GTP-binding protein	complement(4197116..4198315)	Alkaliphilus metalliredigens QYMF	5314184
YP_001321844.1	CDS	Amet_4104	NC_009633.1	4198316	4199626	R	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: tte:TTE1073 Biotin synthase and related enzymes; radical SAM domain-containing protein	complement(4198316..4199626)	Alkaliphilus metalliredigens QYMF	5314185
YP_001321845.1	CDS	thiH	NC_009633.1	4199653	4201026	R	in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and IscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center; in Thermotoga this enzyme has an extra C-terminal domain; thiamine biosynthesis protein ThiH	complement(4199653..4201026)	Alkaliphilus metalliredigens QYMF	5314186
YP_001321846.1	CDS	Amet_4106	NC_009633.1	4201055	4201300	R	KEGG: swo:Swol_1023 hypothetical protein; hypothetical protein	complement(4201055..4201300)	Alkaliphilus metalliredigens QYMF	5314187
YP_001321847.1	CDS	Amet_4107	NC_009633.1	4201717	4203372	R	TIGRFAM: hydrogenase, Fe-only; PFAM: ferredoxin; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; hydrogenase large subunit domain protein; KEGG: cth:Cthe_0342 hydrogenase, Fe-only; hydrogenase, Fe-only	complement(4201717..4203372)	Alkaliphilus metalliredigens QYMF	5314188
YP_001321848.1	CDS	Amet_4108	NC_009633.1	4203415	4205205	R	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: tte:TTE0893 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit; NADH dehydrogenase (quinone)	complement(4203415..4205205)	Alkaliphilus metalliredigens QYMF	5314189
YP_001321849.1	CDS	Amet_4109	NC_009633.1	4205272	4205640	R	KEGG: tte:TTE0892 ferredoxin; ferredoxin	complement(4205272..4205640)	Alkaliphilus metalliredigens QYMF	5314190
YP_001321850.1	CDS	Amet_4110	NC_009633.1	4205672	4206154	R	PFAM: NADH dehydrogenase (ubiquinone), 24 kDa subunit; KEGG: cth:Cthe_0338 NADH-quinone oxidoreductase, E subunit; NADH dehydrogenase (ubiquinone), 24 kDa subunit	complement(4205672..4206154)	Alkaliphilus metalliredigens QYMF	5314191
YP_001321851.1	CDS	Amet_4111	NC_009633.1	4206641	4208362	R	PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; Resolvase helix-turn-helix domain protein; KEGG: ctc:CTC00072 signal-transduction and transcriptional-control protein; sigma-54 dependent trancsriptional regulator	complement(4206641..4208362)	Alkaliphilus metalliredigens QYMF	5314192
YP_001321852.1	CDS	Amet_4112	NC_009633.1	4208455	4209498	R	PFAM: Pyridoxal-5'-phosphate-dependent protein, beta subunit; KEGG: fnu:FN1055 cysteine synthase; pyridoxal-5'-phosphate-dependent protein subunit beta	complement(4208455..4209498)	Alkaliphilus metalliredigens QYMF	5314193
YP_001321853.1	CDS	Amet_4113	NC_009633.1	4209669	4210307	R	TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase; KEGG: ctc:CTC01761 dihydroxyacetone kinase; dihydroxyacetone kinase subunit DhaL	complement(4209669..4210307)	Alkaliphilus metalliredigens QYMF	5314194
YP_001321854.1	CDS	Amet_4114	NC_009633.1	4210316	4211299	R	with DhaL and DhaM forms dihydroxyacetone kinase, which is responsible for phosphorylating dihydroxyacetone; DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase; dihydroxyacetone kinase subunit DhaK	complement(4210316..4211299)	Alkaliphilus metalliredigens QYMF	5314195
YP_001321855.1	CDS	Amet_4115	NC_009633.1	4211319	4212026	R	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mta:Moth_2498 ABC transporter related; ABC transporter-like protein	complement(4211319..4212026)	Alkaliphilus metalliredigens QYMF	5314196
YP_001321856.1	CDS	Amet_4116	NC_009633.1	4212019	4212792	R	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tth:TTC0969 branched-chain amino acid transport ATP-binding protein livG; ABC transporter-like protein	complement(4212019..4212792)	Alkaliphilus metalliredigens QYMF	5314197
YP_001321857.1	CDS	Amet_4117	NC_009633.1	4212794	4213876	R	PFAM: inner-membrane translocator; KEGG: sat:SYN_00787 branched-chain amino acid transport system permease protein; inner-membrane translocator	complement(4212794..4213876)	Alkaliphilus metalliredigens QYMF	5314198
YP_001321858.1	CDS	Amet_4118	NC_009633.1	4213880	4214755	R	PFAM: inner-membrane translocator; KEGG: chy:CHY_2231 high affinity branched-chain amino acid ABC transporter, permease protein; inner-membrane translocator	complement(4213880..4214755)	Alkaliphilus metalliredigens QYMF	5314199
YP_001321859.1	CDS	Amet_4119	NC_009633.1	4214864	4215991	R	PFAM: Extracellular ligand-binding receptor; KEGG: bba:Bd3385 branched-chain amino acid ABC transporter, amino acid-binding protein; extracellular ligand-binding receptor	complement(4214864..4215991)	Alkaliphilus metalliredigens QYMF	5314200
YP_001321860.1	CDS	Amet_4120	NC_009633.1	4216135	4216641	R	KEGG: tde:TDE2362 hypothetical protein; hypothetical protein	complement(4216135..4216641)	Alkaliphilus metalliredigens QYMF	5314201
YP_001321861.1	CDS	Amet_4121	NC_009633.1	4216945	4217895	R	TIGRFAM: putative glucokinase, ROK family; PFAM: ROK family protein; ATPase, BadF/BadG/BcrA/BcrD type; KEGG: tte:TTE1961 transcriptional regulator; ROK family glucokinase	complement(4216945..4217895)	Alkaliphilus metalliredigens QYMF	5314202
YP_001321862.1	CDS	Amet_4122	NC_009633.1	4217912	4218841	R	catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system; HPr kinase/phosphorylase	complement(4217912..4218841)	Alkaliphilus metalliredigens QYMF	5314203
YP_001321863.1	CDS	Amet_4123	NC_009633.1	4218856	4219059	R	PFAM: PspC domain protein; KEGG: cth:Cthe_1057 phage shock protein C, PspC; phage shock protein PspC	complement(4218856..4219059)	Alkaliphilus metalliredigens QYMF	5314204
YP_001321864.1	CDS	uvrC	NC_009633.1	4219070	4220938	R	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C	complement(4219070..4220938)	Alkaliphilus metalliredigens QYMF	5314205
YP_001321865.1	CDS	Amet_4125	NC_009633.1	4221181	4221732	D	KEGG: cth:Cthe_2383 hypothetical protein; hypothetical protein	4221181..4221732	Alkaliphilus metalliredigens QYMF	5314206
YP_001321866.1	CDS	Amet_4126	NC_009633.1	4221777	4224614	R	TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cth:Cthe_0311 excinuclease ABC, A subunit; excinuclease ABC subunit A	complement(4221777..4224614)	Alkaliphilus metalliredigens QYMF	5314207
YP_001321867.1	CDS	Amet_4127	NC_009633.1	4224617	4226611	R	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B	complement(4224617..4226611)	Alkaliphilus metalliredigens QYMF	5314208
YP_001321868.1	CDS	Amet_4128	NC_009633.1	4227328	4228545	R	TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; KEGG: tte:TTE1974 periplasmic protease; carboxyl-terminal protease	complement(4227328..4228545)	Alkaliphilus metalliredigens QYMF	5314209
YP_001321869.1	CDS	Amet_4129	NC_009633.1	4228807	4229940	R	PFAM: peptidase M23B; KEGG: tte:TTE1975 membrane proteins related to metalloendopeptidase; peptidase M23B	complement(4228807..4229940)	Alkaliphilus metalliredigens QYMF	5314210
YP_001321870.1	CDS	Amet_4130	NC_009633.1	4229963	4230859	R	PFAM: protein of unknown function DUF214; KEGG: tte:TTE1976 cell division protein; hypothetical protein	complement(4229963..4230859)	Alkaliphilus metalliredigens QYMF	5314211
YP_001321871.1	CDS	Amet_4131	NC_009633.1	4230849	4231535	R	TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tte:TTE1977 predicted ATPase involved in cell division; cell division ATP-binding protein FtsE	complement(4230849..4231535)	Alkaliphilus metalliredigens QYMF	5314212
YP_001321872.1	CDS	Amet_4132	NC_009633.1	4231784	4232362	D	PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: mta:Moth_2140 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase	4231784..4232362	Alkaliphilus metalliredigens QYMF	5314213
YP_001321873.1	CDS	Amet_4133	NC_009633.1	4232389	4234752	R	PFAM: peptidase S16, lon domain protein; KEGG: tte:TTE1771 predicted ATP-dependent protease; peptidase S16, lon domain-containing protein	complement(4232389..4234752)	Alkaliphilus metalliredigens QYMF	5314214
YP_001321874.1	CDS	Amet_4134	NC_009633.1	4234987	4236012	R	PFAM: Peptidoglycan-binding LysM; KEGG: cth:Cthe_3005 peptidoglycan-binding LysM; peptidoglycan-binding protein LysM	complement(4234987..4236012)	Alkaliphilus metalliredigens QYMF	5314215
YP_001321875.1	CDS	Amet_4135	NC_009633.1	4236274	4239102	R	KEGG: cth:Cthe_2182 Ig-like, group 2; related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase-like protein; exopolysaccharide biosynthesis protein	complement(4236274..4239102)	Alkaliphilus metalliredigens QYMF	5314216
YP_001321876.1	CDS	Amet_4136	NC_009633.1	4239278	4239757	R	KEGG: tte:TTE0116 S-layer homology domain; hypothetical protein	complement(4239278..4239757)	Alkaliphilus metalliredigens QYMF	5314217
YP_001321877.1	CDS	Amet_4137	NC_009633.1	4239812	4239946	R	hypothetical protein	complement(4239812..4239946)	Alkaliphilus metalliredigens QYMF	5314218
YP_001321878.1	CDS	Amet_4138	NC_009633.1	4239971	4240837	R	PFAM: protein of unknown function DUF161; KEGG: tde:TDE2546 hypothetical protein; hypothetical protein	complement(4239971..4240837)	Alkaliphilus metalliredigens QYMF	5314219
YP_001321879.1	CDS	Amet_4139	NC_009633.1	4240847	4241572	R	TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; KEGG: tte:TTE2163 teichoic acid biosynthesis proteins; WecB/TagA/CpsF family glycosyl transferase	complement(4240847..4241572)	Alkaliphilus metalliredigens QYMF	5314220
YP_001321880.1	CDS	Amet_4140	NC_009633.1	4241574	4242680	R	PFAM: polysaccharide pyruvyl transferase; KEGG: tte:TTE2164 hypothetical protein; polysaccharide pyruvyl transferase	complement(4241574..4242680)	Alkaliphilus metalliredigens QYMF	5314221
YP_001321881.1	CDS	Amet_4141	NC_009633.1	4242673	4244844	R	KEGG: tte:TTE2165 hypothetical protein; hypothetical protein	complement(4242673..4244844)	Alkaliphilus metalliredigens QYMF	5314222
YP_001321882.1	CDS	Amet_4142	NC_009633.1	4245167	4245700	R	KEGG: cth:Cthe_2700 hypothetical protein; hypothetical protein	complement(4245167..4245700)	Alkaliphilus metalliredigens QYMF	5314223
YP_001321883.1	CDS	Amet_4143	NC_009633.1	4245904	4246254	R	PFAM: PemK family protein; KEGG: tte:TTE2166 growth inhibitor; transcriptional modulator of MazE/toxin MazF	complement(4245904..4246254)	Alkaliphilus metalliredigens QYMF	5314224
YP_001321884.1	CDS	Amet_4144	NC_009633.1	4246256	4246531	R	PFAM: CopG domain protein DNA-binding domain protein; KEGG: tte:TTE2167 predicted transcriptional regulator containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain; CopG family transcriptional regulator	complement(4246256..4246531)	Alkaliphilus metalliredigens QYMF	5314225
YP_001321885.1	CDS	Amet_4145	NC_009633.1	4246716	4247891	R	TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein; KEGG: mmp:MMP1512 alanine racemase; alanine racemase	complement(4246716..4247891)	Alkaliphilus metalliredigens QYMF	5314226
YP_001321886.1	CDS	Amet_4146	NC_009633.1	4247904	4248563	R	KEGG: tte:TTE2169 hypothetical protein; Outer membrane lipoprotein-sorting protein-like protein	complement(4247904..4248563)	Alkaliphilus metalliredigens QYMF	5314227
YP_001321887.1	CDS	Amet_4147	NC_009633.1	4248663	4249031	R	TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase; KEGG: ctc:CTC02516 4'-phosphopantetheinyl transferase; holo-(acyl-carrier-protein) synthase	complement(4248663..4249031)	Alkaliphilus metalliredigens QYMF	5314228
YP_001321888.1	CDS	Amet_4148	NC_009633.1	4249203	4249823	R	KEGG: cth:Cthe_2695 hypothetical protein; hypothetical protein	complement(4249203..4249823)	Alkaliphilus metalliredigens QYMF	5314229
YP_001321889.1	CDS	Amet_4149	NC_009633.1	4250061	4251041	D	KEGG: cth:Cthe_1300 hypothetical protein; hypothetical protein	4250061..4251041	Alkaliphilus metalliredigens QYMF	5314230
YP_001321890.1	CDS	Amet_4150	NC_009633.1	4251123	4252985	R	PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: ctc:CTC01337 sodium/proton antiporter ShaA; NADH dehydrogenase (quinone)	complement(4251123..4252985)	Alkaliphilus metalliredigens QYMF	5314231
YP_001321891.1	CDS	Amet_4151	NC_009633.1	4253020	4255104	R	PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: ctc:CTC01337 sodium/proton antiporter ShaA; NADH dehydrogenase (quinone)	complement(4253020..4255104)	Alkaliphilus metalliredigens QYMF	5314232
YP_001321892.1	CDS	Amet_4152	NC_009633.1	4255113	4256609	R	PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: ctc:CTC01339 sodium/proton antiporter ShaD; NADH dehydrogenase (quinone)	complement(4255113..4256609)	Alkaliphilus metalliredigens QYMF	5314233
YP_001321893.1	CDS	Amet_4153	NC_009633.1	4256602	4256985	R	PFAM: NADH-ubiquinone oxidoreductase, chain 4L; KEGG: ctc:CTC01340 sodium/proton antiporter; NADH-ubiquinone oxidoreductase, chain 4L	complement(4256602..4256985)	Alkaliphilus metalliredigens QYMF	5314234
YP_001321894.1	CDS	Amet_4154	NC_009633.1	4256985	4257407	R	PFAM: Na+/H+ antiporter MnhB subunit-related protein; KEGG: ctc:CTC01341 sodium/proton antiporter; Na+/H+ antiporter MnhB subunit-like protein	complement(4256985..4257407)	Alkaliphilus metalliredigens QYMF	5314235
YP_001321895.1	CDS	Amet_4155	NC_009633.1	4257409	4257714	R	KEGG: tko:TK2084 membrane bound hydrogenase, MbhE subunit; hypothetical protein	complement(4257409..4257714)	Alkaliphilus metalliredigens QYMF	5314236
YP_001321896.1	CDS	Amet_4156	NC_009633.1	4257711	4257950	R	KEGG: hal:VNG0566C putative multicomponent Na+:H+ antiporter subunit B; putative multicomponent Na+:H+ antiporter subunit B	complement(4257711..4257950)	Alkaliphilus metalliredigens QYMF	5314237
YP_001321897.1	CDS	Amet_4157	NC_009633.1	4257958	4258251	R	TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; KEGG: nph:NP0838A pH adaptation potassium efflux system protein G; sodium/hydrogen antiporter subunit G; monovalent cation/proton antiporter subunit MnhG/PhaG	complement(4257958..4258251)	Alkaliphilus metalliredigens QYMF	5314238
YP_001321898.1	CDS	Amet_4158	NC_009633.1	4258264	4258530	R	PFAM: multiple resistance and pH regulation protein F; KEGG: hwa:HQ1675A pH adaptation potassium efflux system protein F; sodium-potassium/hydrogen antiporter subunit F; multiple resistance and pH regulation protein F	complement(4258264..4258530)	Alkaliphilus metalliredigens QYMF	5314239
YP_001321899.1	CDS	Amet_4159	NC_009633.1	4258527	4259036	R	PFAM: cation antiporter; KEGG: ctc:CTC01342 sodium/proton antiporter ShaE; cation antiporter	complement(4258527..4259036)	Alkaliphilus metalliredigens QYMF	5314240
YP_001321900.1	CDS	Amet_4160	NC_009633.1	4259345	4259773	R	KEGG: nph:NP2988A hypothetical protein; hypothetical protein	complement(4259345..4259773)	Alkaliphilus metalliredigens QYMF	5314241
YP_001321901.1	CDS	Amet_4161	NC_009633.1	4259784	4260143	R	KEGG: nph:NP2988A hypothetical protein; hypothetical protein	complement(4259784..4260143)	Alkaliphilus metalliredigens QYMF	5314242
YP_001321902.1	CDS	Amet_4162	NC_009633.1	4260157	4260429	R	hypothetical protein	complement(4260157..4260429)	Alkaliphilus metalliredigens QYMF	5314243
YP_001321903.1	CDS	Amet_4163	NC_009633.1	4260457	4261233	R	KEGG: oih:OB1023 hypothetical protein; hypothetical protein	complement(4260457..4261233)	Alkaliphilus metalliredigens QYMF	5314244
YP_001321904.1	CDS	Amet_4164	NC_009633.1	4261217	4262227	R	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: oih:OB1022 ABC transporter ATP-binding protein; ABC transporter-like protein	complement(4261217..4262227)	Alkaliphilus metalliredigens QYMF	5314245
YP_001321905.1	CDS	Amet_4165	NC_009633.1	4262242	4262643	R	hypothetical protein	complement(4262242..4262643)	Alkaliphilus metalliredigens QYMF	5314246
YP_001321906.1	CDS	Amet_4166	NC_009633.1	4262858	4263307	R	PFAM: CBS domain containing protein; KEGG: swo:Swol_1883 CBS domain containing membrane protein; hypothetical protein	complement(4262858..4263307)	Alkaliphilus metalliredigens QYMF	5314247
YP_001321907.1	CDS	Amet_4167	NC_009633.1	4263432	4266956	R	PFAM: SMC domain protein; KEGG: tte:TTE0266 ATPase involved in DNA repair; SMC domain-containing protein	complement(4263432..4266956)	Alkaliphilus metalliredigens QYMF	5314248
YP_001321908.1	CDS	Amet_4168	NC_009633.1	4266946	4268166	R	TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase; KEGG: cno:NT01CX_1250 DNA repair exonuclease, putative; nuclease SbcCD subunit D	complement(4266946..4268166)	Alkaliphilus metalliredigens QYMF	5314249
YP_001321909.1	CDS	Amet_4169	NC_009633.1	4268163	4271756	R	TIGRFAM: Recombination helicase AddA; PFAM: UvrD/REP helicase; KEGG: swo:Swol_1146 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); recombination helicase AddA	complement(4268163..4271756)	Alkaliphilus metalliredigens QYMF	5314250
YP_001321910.1	CDS	Amet_4170	NC_009633.1	4272437	4273108	D	hypothetical protein	4272437..4273108	Alkaliphilus metalliredigens QYMF	5314251
YP_001321911.1	CDS	Amet_4171	NC_009633.1	4273176	4274153	R	PFAM: S-layer domain protein; KEGG: mta:Moth_2341 hypothetical protein; S-layer protein	complement(4273176..4274153)	Alkaliphilus metalliredigens QYMF	5314252
YP_001321912.1	CDS	Amet_4172	NC_009633.1	4274672	4275334	R	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: btl:BALH_2727 ABC transporter, ATP-binding protein; ABC transporter-like protein	complement(4274672..4275334)	Alkaliphilus metalliredigens QYMF	5314253
YP_001321913.1	CDS	Amet_4173	NC_009633.1	4275337	4276611	R	KEGG: btk:BT9727_1600 conserved hypothetical protein, possible permease; hypothetical protein	complement(4275337..4276611)	Alkaliphilus metalliredigens QYMF	5314254
YP_001321914.1	CDS	Amet_4174	NC_009633.1	4276605	4277615	R	KEGG: btk:BT9727_1599 hypothetical protein; hypothetical protein	complement(4276605..4277615)	Alkaliphilus metalliredigens QYMF	5314255
YP_001321915.1	CDS	Amet_4175	NC_009633.1	4278275	4278445	R	hypothetical protein	complement(4278275..4278445)	Alkaliphilus metalliredigens QYMF	5314256
YP_001321916.1	CDS	Amet_4176	NC_009633.1	4278498	4281947	R	TIGRFAM: ATP-dependent nuclease subunit AddB; KEGG: swo:Swol_1142 ATP-dependent nuclease subunit B; ATP-dependent nuclease subunit AddB	complement(4278498..4281947)	Alkaliphilus metalliredigens QYMF	5314257
YP_001321917.1	CDS	Amet_4177	NC_009633.1	4282229	4283455	D	KEGG: cac:CAC0475 HD-GYP domain; putative metal dependent phosphohydrolase	4282229..4283455	Alkaliphilus metalliredigens QYMF	5314258
YP_001321918.1	CDS	Amet_4178	NC_009633.1	4283468	4283725	R	hypothetical protein	complement(4283468..4283725)	Alkaliphilus metalliredigens QYMF	5314259
YP_001321919.1	CDS	Amet_4179	NC_009633.1	4283838	4284815	R	PFAM: nucleic acid binding, OB-fold, tRNA/helicase-type; metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: aba:Acid345_4294 metal dependent phosphohydrolase; metal dependent phosphohydrolase	complement(4283838..4284815)	Alkaliphilus metalliredigens QYMF	5314260
YP_001321920.1	CDS	Amet_4180	NC_009633.1	4285075	4285686	D	PFAM: Rubrerythrin; Rubredoxin-type Fe(Cys)4 protein; KEGG: cth:Cthe_1771 rubrerythrin; rubrerythrin	4285075..4285686	Alkaliphilus metalliredigens QYMF	5314261
YP_001321921.1	CDS	Amet_4181	NC_009633.1	4285742	4286878	R	TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: cac:CAC0188 N-acetylglucosamine-6-phosphate deacetylase (gene nagA); N-acetylglucosamine-6-phosphate deacetylase	complement(4285742..4286878)	Alkaliphilus metalliredigens QYMF	5314262
YP_001321922.1	CDS	Amet_4182	NC_009633.1	4287033	4287761	R	TIGRFAM: glucosamine-6-phosphate isomerase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: tte:TTE1023 6-phosphogluconolactonase/Glucosamine-6- phosphate isomerase/deaminase; glucosamine-6-phosphate isomerase	complement(4287033..4287761)	Alkaliphilus metalliredigens QYMF	5314263
YP_001321923.1	CDS	anmK	NC_009633.1	4287846	4289009	R	catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase	complement(4287846..4289009)	Alkaliphilus metalliredigens QYMF	5314264
YP_001321924.1	CDS	Amet_4184	NC_009633.1	4289011	4289766	R	PFAM: YdjC family protein; KEGG: tte:TTE0334 conserved hypothetical protein; hypothetical protein	complement(4289011..4289766)	Alkaliphilus metalliredigens QYMF	5314265
YP_001321925.1	CDS	Amet_4185	NC_009633.1	4289781	4291115	R	PFAM: glycoside hydrolase, family 4; KEGG: tte:TTE0337 Alpha-galactosidases/6-phospho-beta- glucosidases, family 4 of glycosyl hydrolases; glycoside hydrolase	complement(4289781..4291115)	Alkaliphilus metalliredigens QYMF	5314266
YP_001321926.1	CDS	Amet_4186	NC_009633.1	4291136	4291459	R	PFAM: phosphotransferase system PTS, lactose/cellobiose-specific IIA subunit; KEGG: sha:SH0190 hypothetical protein; PTS system lactose/cellobiose-specific transporter subunit IIA	complement(4291136..4291459)	Alkaliphilus metalliredigens QYMF	5314267
YP_001321927.1	CDS	Amet_4187	NC_009633.1	4291623	4292897	R	TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system, EIIC; KEGG: bcl:ABC3667 PTS system, diacetylchitobiose-specific enzyme II, C component; PTS system lactose/cellobiose family transporter subunit IIC	complement(4291623..4292897)	Alkaliphilus metalliredigens QYMF	5314268
YP_001321928.1	CDS	Amet_4188	NC_009633.1	4292921	4293238	R	PFAM: phosphotransferase system, lactose/cellobiose-specific IIB subunit; KEGG: btl:BALH_2193 PTS system, diacetylchitobiose-specific IIB component; phosphotransferase system, lactose/cellobiose-specific IIB subunit	complement(4292921..4293238)	Alkaliphilus metalliredigens QYMF	5314269
YP_001321929.1	CDS	Amet_4189	NC_009633.1	4293232	4294155	R	TIGRFAM: glucokinase regulatory-like protein; KEGG: vpa:VP0543 glucokinase regulatory protein-related protein; RpiR family transcriptional regulator	complement(4293232..4294155)	Alkaliphilus metalliredigens QYMF	5314270
YP_001321930.1	CDS	Amet_4190	NC_009633.1	4294170	4295021	R	PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: tte:TTE0211 transcriptional regulator; RpiR family transcriptional regulator	complement(4294170..4295021)	Alkaliphilus metalliredigens QYMF	5314271
YP_001321931.1	CDS	Amet_4191	NC_009633.1	4295018	4295992	R	PFAM: ATPase, BadF/BadG/BcrA/BcrD type; KEGG: sha:SH0193 hypothetical protein; BadF/BadG/BcrA/BcrD type ATPase	complement(4295018..4295992)	Alkaliphilus metalliredigens QYMF	5314272
YP_001321932.1	CDS	Amet_4193	NC_009633.1	4297053	4297376	R	PFAM: phosphotransferase system PTS, lactose/cellobiose-specific IIA subunit; KEGG: tte:TTE0336 Phosphotransferase system cellobiose-specific component IIA; PTS system lactose/cellobiose-specific transporter subunit IIA	complement(4297053..4297376)	Alkaliphilus metalliredigens QYMF	5314274
YP_001321933.1	CDS	Amet_4194	NC_009633.1	4297403	4298713	R	PFAM: glycoside hydrolase, family 4; KEGG: tte:TTE0337 Alpha-galactosidases/6-phospho-beta- glucosidases, family 4 of glycosyl hydrolases; glycoside hydrolase	complement(4297403..4298713)	Alkaliphilus metalliredigens QYMF	5314275
YP_001321934.1	CDS	Amet_4195	NC_009633.1	4298781	4300070	R	TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system, EIIC; KEGG: bcz:BCZK4903 PTS system, cellobiose-specific IIC component; PTS system lactose/cellobiose family transporter subunit IIC	complement(4298781..4300070)	Alkaliphilus metalliredigens QYMF	5314276
YP_001321935.1	CDS	Amet_4196	NC_009633.1	4300128	4300433	R	PFAM: phosphotransferase system, lactose/cellobiose-specific IIB subunit; KEGG: lmf:LMOf2365_2663 PTS system, beta-glucoside-specific, IIB component; phosphotransferase system, lactose/cellobiose-specific IIB subunit	complement(4300128..4300433)	Alkaliphilus metalliredigens QYMF	5314277
YP_001321936.1	CDS	Amet_4197	NC_009633.1	4300718	4303447	R	PFAM: sigma-54 factor, interaction domain-containing protein; transcriptional regulator TrmB; PTS system fructose subfamily IIA component; PRD domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: lwe:lwe1738 transcriptional regulator, putative; transcriptional regulator TrmB	complement(4300718..4303447)	Alkaliphilus metalliredigens QYMF	5314278
YP_001321937.1	CDS	Amet_4198	NC_009633.1	4303600	4304514	R	catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase	complement(4303600..4304514)	Alkaliphilus metalliredigens QYMF	5314279
YP_001321938.1	CDS	Amet_4199	NC_009633.1	4304933	4305376	R	hypothetical protein	complement(4304933..4305376)	Alkaliphilus metalliredigens QYMF	5314280
YP_001321939.1	CDS	pyrB	NC_009633.1	4305891	4306826	D	catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit	4305891..4306826	Alkaliphilus metalliredigens QYMF	5314281
YP_001321940.1	CDS	Amet_4201	NC_009633.1	4306820	4307248	D	involved in the allosteric regulation of aspartate carbamoyltransferase; aspartate carbamoyltransferase regulatory subunit	4306820..4307248	Alkaliphilus metalliredigens QYMF	5314282
YP_001321941.1	CDS	Amet_4202	NC_009633.1	4307415	4308041	R	PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: cac:CAC0240 response regulator (CheY-like recever domain and HTH DNA-binding domain); two component LuxR family transcriptional regulator	complement(4307415..4308041)	Alkaliphilus metalliredigens QYMF	5314283
YP_001321942.1	CDS	Amet_4203	NC_009633.1	4308016	4309122	R	PFAM: ATP-binding region, ATPase domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: cno:NT01CX_1313 histidine kinase-like ATPase; integral membrane sensor signal transduction histidine kinase	complement(4308016..4309122)	Alkaliphilus metalliredigens QYMF	5314284
YP_001321943.1	CDS	Amet_4204	NC_009633.1	4309354	4310463	R	PFAM: ABC-2 type transporter; KEGG: cac:CAC0243 predicted permease; ABC transporter	complement(4309354..4310463)	Alkaliphilus metalliredigens QYMF	5314285
YP_001321944.1	CDS	Amet_4205	NC_009633.1	4310460	4311638	R	PFAM: ABC-2 type transporter; KEGG: cac:CAC0242 predicted permease; ABC transporter	complement(4310460..4311638)	Alkaliphilus metalliredigens QYMF	5314286
YP_001321945.1	CDS	Amet_4206	NC_009633.1	4311650	4312582	R	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cno:NT01CX_1310 ABC-type multidrug transport system, ATP-ase compoment CAC0241; ABC transporter-like protein	complement(4311650..4312582)	Alkaliphilus metalliredigens QYMF	5314287
YP_001321946.1	CDS	pyrE	NC_009633.1	4312739	4313320	R	involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase	complement(4312739..4313320)	Alkaliphilus metalliredigens QYMF	5314288
YP_001321947.1	CDS	Amet_4208	NC_009633.1	4313464	4314372	R	catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway, using a flavin nucleotide as an essential cofactor; subclass 1B is a heterotetramer consisting of two PyrDB subunits, similar to the PyrDA subunits and two PyrK subunits; dihydroorotate dehydrogenase 1B	complement(4313464..4314372)	Alkaliphilus metalliredigens QYMF	5314289
YP_001321948.1	CDS	Amet_4209	NC_009633.1	4314365	4315138	R	PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: cth:Cthe_0948 oxidoreductase FAD/NAD(P)-binding; oxidoreductase FAD/NAD(P)-binding subunit	complement(4314365..4315138)	Alkaliphilus metalliredigens QYMF	5314290
YP_001321949.1	CDS	carB	NC_009633.1	4315135	4318347	R	four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit	complement(4315135..4318347)	Alkaliphilus metalliredigens QYMF	5314291
YP_001321950.1	CDS	Amet_4211	NC_009633.1	4318326	4319411	R	catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit	complement(4318326..4319411)	Alkaliphilus metalliredigens QYMF	5314292
YP_001321951.1	CDS	Amet_4212	NC_009633.1	4319427	4320350	R	TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; KEGG: cth:Cthe_0951 orotidine 5'-phosphate decarboxylase; orotidine 5'-phosphate decarboxylase	complement(4319427..4320350)	Alkaliphilus metalliredigens QYMF	5314293
YP_001321952.1	CDS	Amet_4213	NC_009633.1	4320409	4321698	R	TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: cth:Cthe_0952 dihydroorotase, multifunctional complex type; dihydroorotase, multifunctional complex type	complement(4320409..4321698)	Alkaliphilus metalliredigens QYMF	5314294
YP_001321953.1	CDS	Amet_4214	NC_009633.1	4322238	4323293	R	KEGG: ctc:CTC01832 hypothetical protein; hypothetical protein	complement(4322238..4323293)	Alkaliphilus metalliredigens QYMF	5314295
YP_001321954.1	CDS	Amet_4215	NC_009633.1	4323733	4324554	R	PFAM: peptidase M55, D-aminopeptidase; KEGG: mta:Moth_1265 peptidase M55, D-aminopeptidase; peptidase M55, D-aminopeptidase	complement(4323733..4324554)	Alkaliphilus metalliredigens QYMF	5314296
YP_001321955.1	CDS	Amet_4216	NC_009633.1	4324707	4325810	R	involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV	complement(4324707..4325810)	Alkaliphilus metalliredigens QYMF	5314297
YP_001321956.1	CDS	asnC	NC_009633.1	4325886	4327277	R	catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase	complement(4325886..4327277)	Alkaliphilus metalliredigens QYMF	5314298
YP_001321957.1	CDS	Amet_4218	NC_009633.1	4327713	4328990	R	PFAM: major facilitator superfamily MFS_1; KEGG: btl:BALH_2399 permease; major facilitator superfamily transporter	complement(4327713..4328990)	Alkaliphilus metalliredigens QYMF	5314299
YP_001321958.1	CDS	Amet_4219	NC_009633.1	4329121	4330350	R	PFAM: regulatory protein, MerR; Methyltransferase type 11; KEGG: btl:BALH_2398 possible transcriptional regulator, MerR family; MerR family transcriptional regulator	complement(4329121..4330350)	Alkaliphilus metalliredigens QYMF	5314300
YP_001321959.1	CDS	Amet_4220	NC_009633.1	4330376	4332721	R	PFAM: DEAD_2 domain protein; SMART: DEXDc2; helicase c2; KEGG: cth:Cthe_0289 DEAD_2; DEAD/DEAH box helicase	complement(4330376..4332721)	Alkaliphilus metalliredigens QYMF	5314301
YP_001321960.1	CDS	Amet_4221	NC_009633.1	4332858	4333442	R	KEGG: ctc:CTC00156 hypothetical protein; hypothetical protein	complement(4332858..4333442)	Alkaliphilus metalliredigens QYMF	5314302
YP_001321961.1	CDS	Amet_4222	NC_009633.1	4333447	4334433	R	KEGG: ctc:CTC00157 hypothetical protein; hypothetical protein	complement(4333447..4334433)	Alkaliphilus metalliredigens QYMF	5314303
YP_001321962.1	CDS	Amet_4223	NC_009633.1	4334602	4334955	R	TIGRFAM: Sporulation stage V, protein AE; PFAM: SpoVA protein; KEGG: bcl:ABC1827 stage V sporulation protein AE; sporulation stage V, protein AE	complement(4334602..4334955)	Alkaliphilus metalliredigens QYMF	5314304
YP_001321963.1	CDS	Amet_4224	NC_009633.1	4334968	4335972	R	PFAM: Stage V sporulation AD family protein; KEGG: gka:GK0854 stage V sporulation protein SpoVAD; stage V sporulation protein AD	complement(4334968..4335972)	Alkaliphilus metalliredigens QYMF	5314305
YP_001321964.1	CDS	Amet_4225	NC_009633.1	4335973	4336452	R	TIGRFAM: Sporulation stage V, protein AC; PFAM: SpoVA protein; KEGG: btl:BALH_4637 stage V sporulation protein AC; sporulation stage V, protein AC	complement(4335973..4336452)	Alkaliphilus metalliredigens QYMF	5314306
YP_001321965.1	CDS	Amet_4226	NC_009633.1	4336466	4337326	R	PFAM: protein of unknown function DUF421; protein of unknown function DUF1657; KEGG: gka:GK0857 hypothetical protein; hypothetical protein	complement(4336466..4337326)	Alkaliphilus metalliredigens QYMF	5314307
YP_001321966.1	CDS	Amet_4227	NC_009633.1	4337340	4337546	R	PFAM: protein of unknown function DUF1657; KEGG: oih:OB1383 hypothetical protein; hypothetical protein	complement(4337340..4337546)	Alkaliphilus metalliredigens QYMF	5314308
YP_001321967.1	CDS	deoD	NC_009633.1	4337734	4338435	R	catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate; purine nucleoside phosphorylase	complement(4337734..4338435)	Alkaliphilus metalliredigens QYMF	5314309
YP_001321968.1	CDS	Amet_4229	NC_009633.1	4338507	4339457	R	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: tte:TTE0539 phosphoglycerate dehydrogenase and related dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase	complement(4338507..4339457)	Alkaliphilus metalliredigens QYMF	5314310
YP_001321969.1	CDS	Amet_4230	NC_009633.1	4339516	4340877	R	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: cac:CAC0847 probable cation efflux pump (multidrug resistance protein); MATE efflux family protein	complement(4339516..4340877)	Alkaliphilus metalliredigens QYMF	5314311
YP_001321970.1	CDS	Amet_4231	NC_009633.1	4341094	4341777	R	PFAM: protein of unknown function DUF124; KEGG: chy:CHY_2133 conserved hypothetical protein TIGR00266; hypothetical protein	complement(4341094..4341777)	Alkaliphilus metalliredigens QYMF	5314312
YP_001321971.1	CDS	Amet_4232	NC_009633.1	4341960	4342550	R	PFAM: thiamine monophosphate synthase; KEGG: cno:NT01CX_1504 thiamine-phosphate pyrophosphorylase, putative; thiamine-phosphate diphosphorylase	complement(4341960..4342550)	Alkaliphilus metalliredigens QYMF	5314313
YP_001321972.1	CDS	Amet_4233	NC_009633.1	4342551	4343864	R	required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC	complement(4342551..4343864)	Alkaliphilus metalliredigens QYMF	5314314
YP_001321973.1	CDS	Amet_4234	NC_009633.1	4343888	4344991	R	TIGRFAM: thiazole biosynthesis protein ThiH; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; KEGG: cth:Cthe_0599 thiazole biosynthesis protein ThiH; thiazole biosynthesis protein ThiH	complement(4343888..4344991)	Alkaliphilus metalliredigens QYMF	5314315
YP_001321974.1	CDS	Amet_4235	NC_009633.1	4344991	4345767	R	PFAM: thiazole biosynthesis family protein; KEGG: mta:Moth_1663 thiazole biosynthesis; thiazole biosynthesis family protein	complement(4344991..4345767)	Alkaliphilus metalliredigens QYMF	5314316
YP_001321975.1	CDS	Amet_4236	NC_009633.1	4345782	4346588	R	catalyzes the adenylation of ThiS which is involved in the formation of 5-methyl-4-(beta-hydroxyethyl)thiazole phosphate; thiamine biosynthesis protein ThiF	complement(4345782..4346588)	Alkaliphilus metalliredigens QYMF	5314317
YP_001321976.1	CDS	Amet_4237	NC_009633.1	4346590	4346784	R	TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: cno:NT01CX_1502 thiamine biosynthesis protein ThiS; thiamine biosynthesis protein ThiS	complement(4346590..4346784)	Alkaliphilus metalliredigens QYMF	5314318
YP_001321977.1	CDS	Amet_4238	NC_009633.1	4347087	4347947	R	KEGG: dsy:DSY0932 hypothetical protein; hypothetical protein	complement(4347087..4347947)	Alkaliphilus metalliredigens QYMF	5314319
YP_001321978.1	CDS	Amet_4239	NC_009633.1	4348142	4348786	D	KEGG: pin:Ping_2866 hypothetical protein; hypothetical protein	4348142..4348786	Alkaliphilus metalliredigens QYMF	5314320
YP_001321979.1	CDS	Amet_4242	NC_009633.1	4349542	4349841	R	KEGG: eca:ECA1285 hypothetical protein; hypothetical protein	complement(4349542..4349841)	Alkaliphilus metalliredigens QYMF	5314323
YP_001321980.1	CDS	Amet_4243	NC_009633.1	4349843	4351198	R	PFAM: protein of unknown function DUF1446; KEGG: rru:Rru_A1474 protein of unknown function DUF1446; hypothetical protein	complement(4349843..4351198)	Alkaliphilus metalliredigens QYMF	5314324
YP_001321981.1	CDS	Amet_4244	NC_009633.1	4351244	4352539	R	TIGRFAM: citrate/H+ symporter, CitMHS family; PFAM: Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rpc:RPC_0826 citrate transporter; CitMHS family citrate/H+ symporter	complement(4351244..4352539)	Alkaliphilus metalliredigens QYMF	5314325
YP_001321982.1	CDS	Amet_4245	NC_009633.1	4353021	4354361	R	TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: PAS domain containing protein; AAA ATPase; KEGG: bcl:ABC0453 transcriptional regulator; sigma-54 dependent trancsriptional regulator	complement(4353021..4354361)	Alkaliphilus metalliredigens QYMF	5314326
YP_001321983.1	CDS	Amet_4246	NC_009633.1	4354987	4355649	R	TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; KEGG: tte:TTE0721 Acyl-CoA:acetate CoA transferase beta subunit; 3-oxoacid CoA-transferase subunit B	complement(4354987..4355649)	Alkaliphilus metalliredigens QYMF	5314327
YP_001321984.1	CDS	Amet_4247	NC_009633.1	4355649	4356302	R	TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; KEGG: spa:M6_Spy1391 acetate CoA-transferase alpha subunit; 3-oxoacid CoA-transferase subunit A	complement(4355649..4356302)	Alkaliphilus metalliredigens QYMF	5314328
YP_001321985.1	CDS	Amet_4248	NC_009633.1	4356690	4358102	R	PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: ctc:CTC00707 transcriptional regulatory protein; sigma-54 dependent trancsriptional regulator	complement(4356690..4358102)	Alkaliphilus metalliredigens QYMF	5314329
YP_001321986.1	CDS	Amet_4249	NC_009633.1	4358180	4359487	R	KEGG: dsy:DSY2439 hypothetical protein; hypothetical protein	complement(4358180..4359487)	Alkaliphilus metalliredigens QYMF	5314330
YP_001321987.1	CDS	Amet_4250	NC_009633.1	4359484	4360002	R	TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: dsy:DSY2440 hypothetical protein; ECF subfamily RNA polymerase sigma-24 factor	complement(4359484..4360002)	Alkaliphilus metalliredigens QYMF	5314331
YP_001321988.1	CDS	Amet_4251	NC_009633.1	4360177	4360494	R	hypothetical protein	complement(4360177..4360494)	Alkaliphilus metalliredigens QYMF	5314332
YP_001321989.1	CDS	Amet_4252	NC_009633.1	4360667	4361752	R	PFAM: Peptidoglycan-binding LysM; polysaccharide deacetylase; KEGG: bha:BH1917 chitooligosaccharide deacetylase; polysaccharide deacetylase	complement(4360667..4361752)	Alkaliphilus metalliredigens QYMF	5314333
YP_001321990.1	CDS	Amet_4253	NC_009633.1	4362075	4363307	D	PFAM: peptidase M29, aminopeptidase II; KEGG: bha:BH2245 aminopeptidase; peptidase M29, aminopeptidase II	4362075..4363307	Alkaliphilus metalliredigens QYMF	5314334
YP_001321991.1	CDS	Amet_4254	NC_009633.1	4363351	4365015	R	catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase	complement(4363351..4365015)	Alkaliphilus metalliredigens QYMF	5314335
YP_001321992.1	CDS	Amet_4255	NC_009633.1	4365074	4365757	R	TIGRFAM: uracil-DNA glycosylase; PFAM: Uracil-DNA glycosylase superfamily; KEGG: gka:GK3421 uracil-DNA glycosylase; uracil-DNA glycosylase	complement(4365074..4365757)	Alkaliphilus metalliredigens QYMF	5314336
YP_001321993.1	CDS	Amet_4256	NC_009633.1	4365829	4367172	R	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; KEGG: cpf:CPF_1735 MATE efflux family protein; MATE efflux family protein	complement(4365829..4367172)	Alkaliphilus metalliredigens QYMF	5314337
YP_001321994.1	CDS	Amet_4257	NC_009633.1	4367261	4367968	R	PFAM: protein of unknown function DUF45; KEGG: cpf:CPF_2595 hypothetical protein; hypothetical protein	complement(4367261..4367968)	Alkaliphilus metalliredigens QYMF	5314338
YP_001321995.1	CDS	Amet_4258	NC_009633.1	4368152	4368883	D	TIGRFAM: aspartate racemase; PFAM: Asp/Glu racemase; KEGG: tte:TTE1724 aspartate racemase; aspartate racemase	4368152..4368883	Alkaliphilus metalliredigens QYMF	5314339
YP_001321996.1	CDS	Amet_4259	NC_009633.1	4368933	4369424	R	PFAM: Rubrerythrin; KEGG: tko:TK1056 rubrerythrin-related protein; rubrerythrin	complement(4368933..4369424)	Alkaliphilus metalliredigens QYMF	5314340
YP_001321997.1	CDS	Amet_4260	NC_009633.1	4369581	4370240	R	TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein; KEGG: ctc:CTC00586 hemolysin III; hemolysin III family channel protein	complement(4369581..4370240)	Alkaliphilus metalliredigens QYMF	5314341
YP_001321998.1	CDS	Amet_4261	NC_009633.1	4370432	4371628	R	KEGG: ava:Ava_4088 hypothetical protein; hypothetical protein	complement(4370432..4371628)	Alkaliphilus metalliredigens QYMF	5314342
YP_001321999.1	CDS	Amet_4262	NC_009633.1	4371833	4372663	D	TIGRFAM: putative ribonuclease BN; PFAM: ribonuclease BN; KEGG: ctc:CTC02522 ribonuclease BN; putative ribonuclease BN	4371833..4372663	Alkaliphilus metalliredigens QYMF	5314343
YP_001322000.1	CDS	Amet_4263	NC_009633.1	4372709	4373566	R	PFAM: TatD-related deoxyribonuclease; amidohydrolase 2; KEGG: cgb:cg0345 metal-dependent hydrolase of the TIM-barrel fold; amidohydrolase 2	complement(4372709..4373566)	Alkaliphilus metalliredigens QYMF	5314344
YP_001322001.1	CDS	Amet_4264	NC_009633.1	4373884	4374180	D	KEGG: csa:Csal_0787 YCII-related; hypothetical protein	4373884..4374180	Alkaliphilus metalliredigens QYMF	5314345
YP_001322002.1	CDS	Amet_4265	NC_009633.1	4374361	4375107	R	PFAM: zinc/iron permease; KEGG: tte:TTE0144 predicted divalent heavy-metal cations transporter; zinc/iron permease	complement(4374361..4375107)	Alkaliphilus metalliredigens QYMF	5314346
YP_001322003.1	CDS	Amet_4266	NC_009633.1	4375388	4375723	R	PFAM: transcriptional coactivator/pterin dehydratase; KEGG: rxy:Rxyl_2043 transcriptional coactivator/pterin dehydratase; transcriptional coactivator/pterin dehydratase	complement(4375388..4375723)	Alkaliphilus metalliredigens QYMF	5314347
YP_001322004.1	CDS	Amet_4267	NC_009633.1	4375890	4377155	R	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ecv:APECO1_3598 putative oxidoreductase; alcohol dehydrogenase	complement(4375890..4377155)	Alkaliphilus metalliredigens QYMF	5314348
YP_001322005.1	CDS	Amet_4268	NC_009633.1	4377156	4378106	R	PFAM: PfkB domain protein; KEGG: cac:CAC0232 1-phosphofructokinase (fructoso 1-phosphate kinase); 1-phosphofructokinase	complement(4377156..4378106)	Alkaliphilus metalliredigens QYMF	5314349
YP_001322006.1	CDS	Amet_4269	NC_009633.1	4378145	4380016	R	TIGRFAM: PTS system, mannitol-specific IIC subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; phosphotransferase system, EIIC; phosphotransferase system, lactose/cellobiose-specific IIB subunit; KEGG: eca:ECA0087 PTS system, mannitol-specific IIabc component; PTS system mannitol-specific transporter subunit IIC	complement(4378145..4380016)	Alkaliphilus metalliredigens QYMF	5314350
YP_001322007.1	CDS	Amet_4270	NC_009633.1	4380035	4382152	R	PFAM: PRD domain protein; Helix-turn-helix, type 11 domain protein; KEGG: tte:TTE0598 putative transcriptional regulator; transcriptional antiterminator BglG	complement(4380035..4382152)	Alkaliphilus metalliredigens QYMF	5314351
YP_001322008.1	CDS	Amet_4271	NC_009633.1	4382258	4383652	R	TIGRFAM: PTS system, mannitol-specific IIC subunit; PFAM: phosphotransferase system, EIIC; phosphotransferase system, lactose/cellobiose-specific IIB subunit; KEGG: gka:GK1948 PTS system, mannitol-permease II, BC component; PTS system mannitol-specific transporter subunit IIC	complement(4382258..4383652)	Alkaliphilus metalliredigens QYMF	5314352
YP_001322009.1	CDS	Amet_4272	NC_009633.1	4383986	4384279	R	PFAM: Coat F domain protein; KEGG: cac:CAC3317 spore coat protein F (CotF) family protein; coat F domain-containing protein	complement(4383986..4384279)	Alkaliphilus metalliredigens QYMF	5314353
YP_001322010.1	CDS	Amet_4273	NC_009633.1	4384281	4384499	R	KEGG: cac:CAC3318 hypothetical protein; hypothetical protein	complement(4384281..4384499)	Alkaliphilus metalliredigens QYMF	5314354
YP_001322011.1	CDS	Amet_4274	NC_009633.1	4384625	4385719	R	TIGRFAM: tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: msu:MS1105 isocitrate/isopropylmalate dehydrogenase; tartrate dehydrogenase	complement(4384625..4385719)	Alkaliphilus metalliredigens QYMF	5314355
YP_001322012.1	CDS	Amet_4275	NC_009633.1	4385738	4387318	R	catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase	complement(4385738..4387318)	Alkaliphilus metalliredigens QYMF	5314356
YP_001322013.1	CDS	Amet_4276	NC_009633.1	4387590	4387724	R	hypothetical protein	complement(4387590..4387724)	Alkaliphilus metalliredigens QYMF	5314357
YP_001322014.1	CDS	Amet_4277	NC_009633.1	4388006	4388845	R	KEGG: rxy:Rxyl_3061 hypothetical protein; hypothetical protein	complement(4388006..4388845)	Alkaliphilus metalliredigens QYMF	5314358
YP_001322015.1	CDS	Amet_4278	NC_009633.1	4389009	4389554	R	PFAM: NUDIX hydrolase; KEGG: cac:CAC1006 MutT-like (NUDIX) hydrolase; NUDIX hydrolase	complement(4389009..4389554)	Alkaliphilus metalliredigens QYMF	5314359
YP_001322016.1	CDS	Amet_4279	NC_009633.1	4389659	4390525	R	PFAM: Abortive infection protein; KEGG: gfo:orf15 metal-dependent membrane protease; abortive infection protein	complement(4389659..4390525)	Alkaliphilus metalliredigens QYMF	5314360
YP_001322017.1	CDS	Amet_4281	NC_009633.1	4391062	4391442	R	KEGG: rba:RB11641 hypothetical protein; hypothetical protein	complement(4391062..4391442)	Alkaliphilus metalliredigens QYMF	5314362
YP_001322018.1	CDS	Amet_4282	NC_009633.1	4391479	4391841	R	PFAM: GCN5-related N-acetyltransferase; KEGG: cac:CAC1007 predicted acetyltransferase; N-acetyltransferase GCN5	complement(4391479..4391841)	Alkaliphilus metalliredigens QYMF	5314363
YP_001322019.1	CDS	Amet_4283	NC_009633.1	4392823	4393086	R	hypothetical protein	complement(4392823..4393086)	Alkaliphilus metalliredigens QYMF	5314364
YP_001322020.1	CDS	Amet_4284	NC_009633.1	4393508	4394191	R	KEGG: cpf:CPF_2608 putative membrane-associated zinc metalloprotease; hypothetical protein	complement(4393508..4394191)	Alkaliphilus metalliredigens QYMF	5314365
YP_001322021.1	CDS	Amet_4285	NC_009633.1	4394427	4394633	D	PFAM: protein of unknown function UPF0150; KEGG: mta:Moth_0249 hypothetical protein; hypothetical protein	4394427..4394633	Alkaliphilus metalliredigens QYMF	5314366
YP_001322022.1	CDS	Amet_4287	NC_009633.1	4395093	4395266	R	hypothetical protein	complement(4395093..4395266)	Alkaliphilus metalliredigens QYMF	5314368
YP_001322023.1	CDS	Amet_4288	NC_009633.1	4395905	4396636	R	TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: tko:TK0480 metal-dependent phosphohydrolase, HD superfamily; metal dependent phosphohydrolase	complement(4395905..4396636)	Alkaliphilus metalliredigens QYMF	5314369
YP_001322024.1	CDS	Amet_4289	NC_009633.1	4396857	4397291	R	hypothetical protein	complement(4396857..4397291)	Alkaliphilus metalliredigens QYMF	5314370
YP_001322025.1	CDS	Amet_4290	NC_009633.1	4397526	4398599	R	PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; KEGG: mbu:Mbur_2039 RNA-directed DNA polymerase; RNA-directed DNA polymerase	complement(4397526..4398599)	Alkaliphilus metalliredigens QYMF	5314371
YP_001322026.1	CDS	Amet_4291	NC_009633.1	4399160	4401217	D	PFAM: Resolvase, N-terminal domain; KEGG: fra:Francci3_2088 recombinase; resolvase domain-containing protein	4399160..4401217	Alkaliphilus metalliredigens QYMF	5314372
YP_001322027.1	CDS	Amet_4292	NC_009633.1	4401226	4401660	R	KEGG: mba:Mbar_A1733 reverse transcriptase; hypothetical protein	complement(4401226..4401660)	Alkaliphilus metalliredigens QYMF	5314373
YP_001322028.1	CDS	Amet_4293	NC_009633.1	4402496	4402960	R	PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: cac:CAC2475 possible 5-Nitroimidazole antibiotics resistance protein, NimA-family; pyridoxamine 5'-phosphate oxidase-like protein	complement(4402496..4402960)	Alkaliphilus metalliredigens QYMF	5314374
YP_001322029.1	CDS	Amet_4294	NC_009633.1	4403398	4403643	R	hypothetical protein	complement(4403398..4403643)	Alkaliphilus metalliredigens QYMF	5314375
YP_001322030.1	CDS	Amet_4295	NC_009633.1	4404127	4404747	R	PFAM: Tellurite resistance protein TehB; Methyltransferase type 11; Methyltransferase type 12; KEGG: cno:NT01CX_2005 hypothetical protein; type 12 methyltransferase	complement(4404127..4404747)	Alkaliphilus metalliredigens QYMF	5314376
YP_001322031.1	CDS	Amet_4297	NC_009633.1	4407622	4408242	R	KEGG: bat:BAS3519 putative restriction endonuclease; putative restriction endonuclease	complement(4407622..4408242)	Alkaliphilus metalliredigens QYMF	5314378
YP_001322032.1	CDS	Amet_4299	NC_009633.1	4408764	4410590	R	TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase, class-II; sugar isomerase (SIS); KEGG: tte:TTE2190 glucosamine--fructose-6-phosphate aminotransferase (isomerizing); glucosamine--fructose-6-phosphate aminotransferase	complement(4408764..4410590)	Alkaliphilus metalliredigens QYMF	5314380
YP_001322033.1	CDS	glmM	NC_009633.1	4410986	4412332	R	catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase	complement(4410986..4412332)	Alkaliphilus metalliredigens QYMF	5314381
YP_001322034.1	CDS	Amet_4301	NC_009633.1	4412541	4414154	R	PFAM: carbon starvation protein CstA; KEGG: bcl:ABC1450 carbon starvation-induced protein; carbon starvation protein CstA	complement(4412541..4414154)	Alkaliphilus metalliredigens QYMF	5314382
YP_001322035.1	CDS	Amet_4302	NC_009633.1	4414187	4414504	R	hypothetical protein	complement(4414187..4414504)	Alkaliphilus metalliredigens QYMF	5314383
YP_001322036.1	CDS	Amet_4303	NC_009633.1	4414486	4415034	R	PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: sth:STH224 2-oxoglutarate oxidoreductase gamma subunit; pyruvate ferredoxin/flavodoxin oxidoreductase	complement(4414486..4415034)	Alkaliphilus metalliredigens QYMF	5314384
YP_001322037.1	CDS	Amet_4304	NC_009633.1	4415036	4415782	R	PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: cth:Cthe_0865 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin); thiamine pyrophosphate binding domain-containing protein	complement(4415036..4415782)	Alkaliphilus metalliredigens QYMF	5314385
YP_001322038.1	CDS	Amet_4305	NC_009633.1	4415782	4416843	R	catalyzes the coenzyme A-dependent oxidation of 3-methyl-2-oxobutanoate coupled to the reduction of ferredoxin producing S-(2-methylpropanoyl)-CoA; 2-ketoisovalerate ferredoxin reductase	complement(4415782..4416843)	Alkaliphilus metalliredigens QYMF	5314386
YP_001322039.1	CDS	Amet_4306	NC_009633.1	4416870	4417097	R	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: cth:Cthe_0867 4Fe-4S ferredoxin, iron-sulfur binding; 4Fe-4S ferredoxin	complement(4416870..4417097)	Alkaliphilus metalliredigens QYMF	5314387
YP_001322040.1	CDS	Amet_4307	NC_009633.1	4417200	4417871	R	KEGG: cth:Cthe_0869 hypothetical protein; hypothetical protein	complement(4417200..4417871)	Alkaliphilus metalliredigens QYMF	5314388
YP_001322041.1	CDS	Amet_4308	NC_009633.1	4417886	4418962	R	catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate; butyrate kinase	complement(4417886..4418962)	Alkaliphilus metalliredigens QYMF	5314389
YP_001322042.1	CDS	Amet_4309	NC_009633.1	4418982	4419890	R	catalyzes the synthesis of butanoylphosphate from butanoyl-CoA and inorganic phosphate; phosphate butyryltransferase	complement(4418982..4419890)	Alkaliphilus metalliredigens QYMF	5314390
YP_001322043.1	CDS	Amet_4310	NC_009633.1	4419883	4420971	R	catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate; butyrate kinase	complement(4419883..4420971)	Alkaliphilus metalliredigens QYMF	5314391
YP_001322044.1	CDS	Amet_4311	NC_009633.1	4421174	4422901	R	TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; AAA ATPase; KEGG: bsu:BG11721 transcriptional activator involved in the control of isoleucine and valine utilization as sole nitrogen sources; sigma-54 dependent trancsriptional regulator	complement(4421174..4422901)	Alkaliphilus metalliredigens QYMF	5314392
YP_001322045.1	CDS	Amet_4312	NC_009633.1	4422928	4424157	R	PFAM: YbbR family protein; KEGG: tte:TTE2207 hypothetical protein; hypothetical protein	complement(4422928..4424157)	Alkaliphilus metalliredigens QYMF	5314393
YP_001322046.1	CDS	Amet_4313	NC_009633.1	4424154	4424978	R	PFAM: protein of unknown function DUF147; KEGG: tte:TTE2209 hypothetical protein; hypothetical protein	complement(4424154..4424978)	Alkaliphilus metalliredigens QYMF	5314394
YP_001322047.1	CDS	Amet_4314	NC_009633.1	4425389	4426099	D	PFAM: transport-associated protein; KEGG: chy:CHY_0056 putative osmotically inducible protein; transport-associated protein	4425389..4426099	Alkaliphilus metalliredigens QYMF	5314395
YP_001322048.1	CDS	Amet_4315	NC_009633.1	4426228	4426389	R	hypothetical protein	complement(4426228..4426389)	Alkaliphilus metalliredigens QYMF	5314396
YP_001322049.1	CDS	Amet_4316	NC_009633.1	4426596	4427687	R	PFAM: Shikimate/quinate 5-dehydrogenase; KEGG: tte:TTE2374 hypothetical protein; shikimate/quinate 5-dehydrogenase	complement(4426596..4427687)	Alkaliphilus metalliredigens QYMF	5314397
YP_001322050.1	CDS	Amet_4317	NC_009633.1	4427690	4429111	R	PFAM: aminotransferase class-III; KEGG: tte:TTE2339 PLP-dependent aminotransferases; class III aminotransferase	complement(4427690..4429111)	Alkaliphilus metalliredigens QYMF	5314398
YP_001322051.1	CDS	Amet_4318	NC_009633.1	4443806	4444624	D	PFAM: Ion transport 2 domain protein; Ion transport 2 domain-containing protein	4443806..4444624	Alkaliphilus metalliredigens QYMF	5314440
YP_001322052.1	CDS	Amet_4319	NC_009633.1	4459015	4459359	R	hypothetical protein	complement(4459015..4459359)	Alkaliphilus metalliredigens QYMF	5314479
YP_001322053.1	CDS	Amet_4320	NC_009633.1	4459376	4460683	R	PFAM: protein of unknown function DUF1576; KEGG: ctc:CTC00068 hypothetical protein; hypothetical protein	complement(4459376..4460683)	Alkaliphilus metalliredigens QYMF	5314480
YP_001322054.1	CDS	Amet_4321	NC_009633.1	4460888	4461523	D	TIGRFAM: Sporulation protein YtaF; KEGG: bat:BAS4480 hypothetical protein; sporulation protein YtaF	4460888..4461523	Alkaliphilus metalliredigens QYMF	5314481
YP_001322055.1	CDS	Amet_4322	NC_009633.1	4461663	4462028	D	KEGG: mva:Mvan_2424 protein of unknown function DUF1622; hypothetical protein	4461663..4462028	Alkaliphilus metalliredigens QYMF	5314482
YP_001322056.1	CDS	Amet_4323	NC_009633.1	4462155	4463747	R	PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; KEGG: bsu:BG13309 two-component sensor histidine kinase; integral membrane sensor signal transduction histidine kinase	complement(4462155..4463747)	Alkaliphilus metalliredigens QYMF	5314483
YP_001322057.1	CDS	Amet_4324	NC_009633.1	4464125	4464688	D	KEGG: ctc:CTC01689 hypothetical protein; hypothetical protein	4464125..4464688	Alkaliphilus metalliredigens QYMF	5314484
YP_001322058.1	CDS	Amet_4325	NC_009633.1	4464804	4465403	D	PFAM: NADPH-dependent FMN reductase; KEGG: deh:cbdb_A1323 NADPH-dependent FMN reductase; NADPH-dependent FMN reductase	4464804..4465403	Alkaliphilus metalliredigens QYMF	5314485
YP_001322059.1	CDS	Amet_4326	NC_009633.1	4465453	4465683	R	PFAM: glutaredoxin; glutaredoxin 2; KEGG: cth:Cthe_0235 glutaredoxin-like protein, YruB-family; glutaredoxin	complement(4465453..4465683)	Alkaliphilus metalliredigens QYMF	5314486
YP_001322060.1	CDS	Amet_4327	NC_009633.1	4465741	4466799	R	TIGRFAM: A/G-specific adenine glycosylase; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; KEGG: sth:STH1727 A/G-specific adenine glycosylase; A/G-specific adenine glycosylase	complement(4465741..4466799)	Alkaliphilus metalliredigens QYMF	5314487
YP_001322061.1	CDS	Amet_4328	NC_009633.1	4467048	4467587	R	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: sth:STH926 2-cys peroxiredoxin; alkyl hydroperoxide reductase	complement(4467048..4467587)	Alkaliphilus metalliredigens QYMF	5314488
YP_001322062.1	CDS	Amet_4329	NC_009633.1	4467843	4468157	D	PFAM: protein of unknown function UPF0016; KEGG: pmn:PMN2A_0359 hypothetical protein; hypothetical protein	4467843..4468157	Alkaliphilus metalliredigens QYMF	5314489
YP_001322063.1	CDS	Amet_4330	NC_009633.1	4468300	4468554	D	TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin; KEGG: cps:CPS_4389 glutaredoxin; glutaredoxin 3	4468300..4468554	Alkaliphilus metalliredigens QYMF	5314490
YP_001322064.1	CDS	Amet_4331	NC_009633.1	4468583	4468966	D	PFAM: protein of unknown function DUF1312; KEGG: cth:Cthe_0562 protein of unknown function DUF1312; hypothetical protein	4468583..4468966	Alkaliphilus metalliredigens QYMF	5314491
YP_001322065.1	CDS	Amet_4332	NC_009633.1	4468966	4469505	D	PFAM: Heptaprenyl diphosphate synthase component I; KEGG: cth:Cthe_0563 heptaprenyl diphosphate synthase component I; heptaprenyl diphosphate synthase component I	4468966..4469505	Alkaliphilus metalliredigens QYMF	5314492
YP_001322066.1	CDS	Amet_4333	NC_009633.1	4469548	4469928	R	KEGG: swo:Swol_0320 hypothetical protein; hypothetical protein	complement(4469548..4469928)	Alkaliphilus metalliredigens QYMF	5314493
YP_001322067.1	CDS	Amet_4334	NC_009633.1	4469961	4470635	R	PFAM: protein of unknown function DUF421; KEGG: swo:Swol_0321 hypothetical protein; hypothetical protein	complement(4469961..4470635)	Alkaliphilus metalliredigens QYMF	5314494
YP_001322068.1	CDS	Amet_4335	NC_009633.1	4470784	4471806	D	PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: gka:GK2332 NADH-dependent flavin oxidoreductase; NADH:flavin oxidoreductase	4470784..4471806	Alkaliphilus metalliredigens QYMF	5314495
YP_001322069.1	CDS	Amet_4336	NC_009633.1	4471886	4473085	R	TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: tte:TTE0596 metal-dependent amidase/aminoacylase/carboxypeptidase; amidohydrolase	complement(4471886..4473085)	Alkaliphilus metalliredigens QYMF	5314496
YP_001322070.1	CDS	Amet_4337	NC_009633.1	4473138	4474439	R	TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: chy:CHY_1951 diaminopimelate decarboxylase; diaminopimelate decarboxylase	complement(4473138..4474439)	Alkaliphilus metalliredigens QYMF	5314497
YP_001322071.1	CDS	Amet_4338	NC_009633.1	4474649	4476142	R	TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: bha:BH3316 succinate-semialdehyde dehydrogenase; succinate-semialdehyde dehydrogenase	complement(4474649..4476142)	Alkaliphilus metalliredigens QYMF	5314498
YP_001322072.1	CDS	Amet_4339	NC_009633.1	4476330	4477157	D	TIGRFAM: putative undecaprenol kinase; PFAM: Bacitracin resistance protein BacA; KEGG: chy:CHY_1158 putative undecaprenol kinase; putative undecaprenol kinase	4476330..4477157	Alkaliphilus metalliredigens QYMF	5314499
YP_001322073.1	CDS	Amet_4340	NC_009633.1	4477448	4478447	R	PFAM: phage integrase domain protein SAM domain protein; KEGG: dsy:DSY2171 hypothetical protein; phage integrase domain/SAM domain-containing protein	complement(join(4477448..4477900,4477902..4478447))	Alkaliphilus metalliredigens QYMF	5314500
YP_001322074.1	CDS	Amet_4341	NC_009633.1	4478897	4479031	R	hypothetical protein	complement(4478897..4479031)	Alkaliphilus metalliredigens QYMF	5314501
YP_001322075.1	CDS	Amet_4342	NC_009633.1	4479024	4479272	R	hypothetical protein	complement(4479024..4479272)	Alkaliphilus metalliredigens QYMF	5314502
YP_001322076.1	CDS	Amet_4343	NC_009633.1	4479274	4479843	R	KEGG: lin:lin1708 hypothetical protein; hypothetical protein	complement(4479274..4479843)	Alkaliphilus metalliredigens QYMF	5314503
YP_001322077.1	CDS	Amet_4344	NC_009633.1	4479854	4480483	R	KEGG: lin:lin1709 hypothetical protein; hypothetical protein	complement(4479854..4480483)	Alkaliphilus metalliredigens QYMF	5314504
YP_001322078.1	CDS	Amet_4345	NC_009633.1	4480476	4481663	R	KEGG: efa:EF1479 hypothetical protein; hypothetical protein	complement(4480476..4481663)	Alkaliphilus metalliredigens QYMF	5314505
YP_001322079.1	CDS	Amet_4346	NC_009633.1	4481656	4482018	R	KEGG: efa:EF1478 hypothetical protein; hypothetical protein	complement(4481656..4482018)	Alkaliphilus metalliredigens QYMF	5314506
YP_001322080.1	CDS	Amet_4347	NC_009633.1	4482018	4482314	R	hypothetical protein	complement(4482018..4482314)	Alkaliphilus metalliredigens QYMF	5314507
YP_001322081.1	CDS	Amet_4348	NC_009633.1	4482311	4483087	R	KEGG: lin:lin1713 hypothetical protein; hypothetical protein	complement(4482311..4483087)	Alkaliphilus metalliredigens QYMF	5314508
YP_001322082.1	CDS	Amet_4349	NC_009633.1	4483074	4483403	R	KEGG: efa:EF1475 hypothetical protein; hypothetical protein	complement(4483074..4483403)	Alkaliphilus metalliredigens QYMF	5314509
YP_001322083.1	CDS	Amet_4350	NC_009633.1	4483400	4483990	R	KEGG: lin:lin1715 hypothetical protein; hypothetical protein	complement(4483400..4483990)	Alkaliphilus metalliredigens QYMF	5314510
YP_001322084.1	CDS	Amet_4351	NC_009633.1	4484003	4485760	R	TIGRFAM: phage tail tape measure protein, TP901 family; KEGG: bld:BLi01480 hypothetical protein; TP901 family phage tail tape measure protein	complement(4484003..4485760)	Alkaliphilus metalliredigens QYMF	5314511
YP_001322085.1	CDS	Amet_4352	NC_009633.1	4485869	4486192	R	hypothetical protein	complement(4485869..4486192)	Alkaliphilus metalliredigens QYMF	5314512
YP_001322086.1	CDS	Amet_4353	NC_009633.1	4486253	4486507	R	hypothetical protein	complement(4486253..4486507)	Alkaliphilus metalliredigens QYMF	5314513
YP_001322087.1	CDS	Amet_4354	NC_009633.1	4486563	4486967	R	KEGG: lin:lin1719 hypothetical protein; hypothetical protein	complement(4486563..4486967)	Alkaliphilus metalliredigens QYMF	5314514
YP_001322088.1	CDS	Amet_4355	NC_009633.1	4486979	4487983	R	KEGG: efa:EF1469 hypothetical protein; hypothetical protein	complement(4486979..4487983)	Alkaliphilus metalliredigens QYMF	5314515
YP_001322089.1	CDS	Amet_4356	NC_009633.1	4487995	4488501	R	hypothetical protein	complement(4487995..4488501)	Alkaliphilus metalliredigens QYMF	5314516
YP_001322090.1	CDS	Amet_4357	NC_009633.1	4488498	4488860	R	hypothetical protein	complement(4488498..4488860)	Alkaliphilus metalliredigens QYMF	5314517
YP_001322091.1	CDS	Amet_4358	NC_009633.1	4488857	4489459	R	KEGG: lin:lin1723 hypothetical protein; hypothetical protein	complement(4488857..4489459)	Alkaliphilus metalliredigens QYMF	5314518
YP_001322092.1	CDS	Amet_4359	NC_009633.1	4489472	4489804	R	KEGG: lin:lin1724 hypothetical protein; hypothetical protein	complement(4489472..4489804)	Alkaliphilus metalliredigens QYMF	5314519
YP_001322093.1	CDS	Amet_4360	NC_009633.1	4489807	4490139	R	hypothetical protein	complement(4489807..4490139)	Alkaliphilus metalliredigens QYMF	5314520
YP_001322094.1	CDS	Amet_4361	NC_009633.1	4490155	4491069	R	KEGG: lin:lin1726 hypothetical protein; hypothetical protein	complement(4490155..4491069)	Alkaliphilus metalliredigens QYMF	5314521
YP_001322095.1	CDS	Amet_4362	NC_009633.1	4491092	4491592	R	KEGG: efa:EF1462 hypothetical protein; hypothetical protein	complement(4491092..4491592)	Alkaliphilus metalliredigens QYMF	5314522
YP_001322096.1	CDS	Amet_4363	NC_009633.1	4491608	4492711	R	KEGG: lin:lin1728 hypothetical protein; hypothetical protein	complement(4491608..4492711)	Alkaliphilus metalliredigens QYMF	5314523
YP_001322097.1	CDS	Amet_4364	NC_009633.1	4492725	4493507	R	TIGRFAM: phage putative head morphogenesis protein, SPP1 gp7 family; PFAM: phage putative head morphogenesis protein, SPP1 gp7; KEGG: efa:EF1457 minor head protein; SPP1 family phage head morphogenesis protein	complement(4492725..4493507)	Alkaliphilus metalliredigens QYMF	5314524
YP_001322098.1	CDS	Amet_4365	NC_009633.1	4493500	4494849	R	TIGRFAM: phage-associated protein, HI1409 family; KEGG: efa:EF1456 conserved hypothetical protein TIGR01555; phage-associated protein	complement(4493500..4494849)	Alkaliphilus metalliredigens QYMF	5314525
YP_001322099.1	CDS	Amet_4366	NC_009633.1	4494867	4496324	R	TIGRFAM: phage uncharacterized protein; KEGG: bha:BH3533 hypothetical protein; phage protein	complement(4494867..4496324)	Alkaliphilus metalliredigens QYMF	5314526
YP_001322100.1	CDS	Amet_4367	NC_009633.1	4496581	4497069	R	PFAM: transcription antitermination protein NusG; SMART: NGN domain protein; KEGG: tte:TTE0730 Transcription antiterminator; NusG antitermination factor	complement(4496581..4497069)	Alkaliphilus metalliredigens QYMF	5314527
YP_001322101.1	CDS	Amet_4368	NC_009633.1	4497083	4497256	R	hypothetical protein	complement(4497083..4497256)	Alkaliphilus metalliredigens QYMF	5314528
YP_001322102.1	CDS	Amet_4369	NC_009633.1	4497231	4497650	R	KEGG: mfa:Mfla_2702 hypothetical protein; hypothetical protein	complement(4497231..4497650)	Alkaliphilus metalliredigens QYMF	5314529
YP_001322103.1	CDS	Amet_4370	NC_009633.1	4497650	4497943	R	hypothetical protein	complement(4497650..4497943)	Alkaliphilus metalliredigens QYMF	5314530
YP_001322104.1	CDS	Amet_4371	NC_009633.1	4497945	4498238	R	hypothetical protein	complement(4497945..4498238)	Alkaliphilus metalliredigens QYMF	5314531
YP_001322105.1	CDS	Amet_4372	NC_009633.1	4498240	4498779	R	hypothetical protein	complement(4498240..4498779)	Alkaliphilus metalliredigens QYMF	5314532
YP_001322106.1	CDS	Amet_4373	NC_009633.1	4498890	4499204	R	hypothetical protein	complement(4498890..4499204)	Alkaliphilus metalliredigens QYMF	5314533
YP_001322107.1	CDS	Amet_4374	NC_009633.1	4499258	4499935	R	PFAM: cell wall hydrolase/autolysin; KEGG: bld:BLi01974 N-acetylmuramoyl-L-alanine amidase cwlL precursor (Cell wall hydrolase) (Autolysin); RBL04154; cell wall hydrolase/autolysin	complement(4499258..4499935)	Alkaliphilus metalliredigens QYMF	5314534
YP_001322108.1	CDS	Amet_4375	NC_009633.1	4500055	4500765	R	KEGG: ssa:SSA_0424 exopolysaccharide biosynthesis protein, putative; related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase-like protein; exopolysaccharide biosynthesis protein	complement(4500055..4500765)	Alkaliphilus metalliredigens QYMF	5314535
YP_001322109.1	CDS	Amet_4376	NC_009633.1	4500795	4501271	R	PFAM: 3D domain protein; KEGG: bsu:BG13521 similar to cell wall-binding protein; hypothetical protein	complement(4500795..4501271)	Alkaliphilus metalliredigens QYMF	5314536
YP_001322110.1	CDS	Amet_4377	NC_009633.1	4501314	4501493	R	hypothetical protein	complement(4501314..4501493)	Alkaliphilus metalliredigens QYMF	5314537
YP_001322111.1	CDS	Amet_4378	NC_009633.1	4501512	4501748	R	hypothetical protein	complement(4501512..4501748)	Alkaliphilus metalliredigens QYMF	5314538
YP_001322112.1	CDS	Amet_4379	NC_009633.1	4501749	4501874	R	hypothetical protein	complement(4501749..4501874)	Alkaliphilus metalliredigens QYMF	5314539
YP_001322113.1	CDS	Amet_4380	NC_009633.1	4501900	4502121	R	hypothetical protein	complement(4501900..4502121)	Alkaliphilus metalliredigens QYMF	5314540
YP_001322114.1	CDS	Amet_4381	NC_009633.1	4502152	4502490	R	hypothetical protein	complement(4502152..4502490)	Alkaliphilus metalliredigens QYMF	5314541
YP_001322115.1	CDS	Amet_4382	NC_009633.1	4502534	4502845	R	hypothetical protein	complement(4502534..4502845)	Alkaliphilus metalliredigens QYMF	5314542
YP_001322116.1	CDS	Amet_4383	NC_009633.1	4503139	4503540	R	KEGG: pol:Bpro_3769 hypothetical protein; hypothetical protein	complement(4503139..4503540)	Alkaliphilus metalliredigens QYMF	5314543
YP_001322117.1	CDS	Amet_4384	NC_009633.1	4503547	4504194	R	TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; KEGG: cpr:CPR_1733 RNA polymerase sigma-E factor; FliA/WhiG family RNA polymerase sigma factor	complement(4503547..4504194)	Alkaliphilus metalliredigens QYMF	5314544
YP_001322118.1	CDS	Amet_4385	NC_009633.1	4504208	4504369	R	hypothetical protein	complement(4504208..4504369)	Alkaliphilus metalliredigens QYMF	5314545
YP_001322119.1	CDS	Amet_4386	NC_009633.1	4504440	4504673	R	hypothetical protein	complement(4504440..4504673)	Alkaliphilus metalliredigens QYMF	5314546
YP_001322120.1	CDS	Amet_4387	NC_009633.1	4504657	4505085	R	hypothetical protein	complement(4504657..4505085)	Alkaliphilus metalliredigens QYMF	5314547
YP_001322121.1	CDS	Amet_4388	NC_009633.1	4505135	4505788	R	hypothetical protein	complement(4505135..4505788)	Alkaliphilus metalliredigens QYMF	5314548
YP_001322122.1	CDS	Amet_4389	NC_009633.1	4505781	4506038	R	PFAM: SpoVT/AbrB domain protein; KEGG: swo:Swol_0047 transcription regulator AbrB; transcriptional regulator/antitoxin MazE	complement(4505781..4506038)	Alkaliphilus metalliredigens QYMF	5314549
YP_001322123.1	CDS	Amet_4390	NC_009633.1	4506022	4506777	R	hypothetical protein	complement(4506022..4506777)	Alkaliphilus metalliredigens QYMF	5314550
YP_001322124.1	CDS	Amet_4391	NC_009633.1	4506755	4506982	R	hypothetical protein	complement(4506755..4506982)	Alkaliphilus metalliredigens QYMF	5314551
YP_001322125.1	CDS	Amet_4392	NC_009633.1	4506984	4507238	R	hypothetical protein	complement(4506984..4507238)	Alkaliphilus metalliredigens QYMF	5314552
YP_001322126.1	CDS	Amet_4393	NC_009633.1	4507238	4508161	R	KEGG: cjr:CJE0269 bacteriophage DNA transposition protein B, putative; hypothetical protein	complement(4507238..4508161)	Alkaliphilus metalliredigens QYMF	5314553
YP_001322127.1	CDS	Amet_4395	NC_009633.1	4510394	4510630	R	KEGG: tte:TTE2173 hypothetical protein; hypothetical protein	complement(4510394..4510630)	Alkaliphilus metalliredigens QYMF	5314555
YP_001322128.1	CDS	Amet_4396	NC_009633.1	4510643	4511113	R	hypothetical protein	complement(4510643..4511113)	Alkaliphilus metalliredigens QYMF	5314556
YP_001322129.1	CDS	Amet_4397	NC_009633.1	4511088	4511294	R	hypothetical protein	complement(4511088..4511294)	Alkaliphilus metalliredigens QYMF	5314557
YP_001322130.1	CDS	Amet_4398	NC_009633.1	4511640	4511825	R	hypothetical protein	complement(4511640..4511825)	Alkaliphilus metalliredigens QYMF	5314558
YP_001322131.1	CDS	Amet_4399	NC_009633.1	4511832	4511957	R	hypothetical protein	complement(4511832..4511957)	Alkaliphilus metalliredigens QYMF	5314559
YP_001322132.1	CDS	Amet_4400	NC_009633.1	4512127	4512891	D	PFAM: helix-turn-helix domain protein; bacteriophage CI repressor; KEGG: ecv:APECO1_376 putative repressor protein encoded within prophage CP-933O; XRE family plasmid maintenance system antidote protein	4512127..4512891	Alkaliphilus metalliredigens QYMF	5314560
YP_001322133.1	CDS	Amet_4401	NC_009633.1	4513644	4515518	R	PFAM: transposase, IS4 family protein; KEGG: tte:TTE2604 transposase; transposase, IS4 family protein	complement(4513644..4515518)	Alkaliphilus metalliredigens QYMF	5314561
YP_001322134.1	CDS	Amet_4402	NC_009633.1	4515859	4516572	R	PFAM: protein of unknown function DUF542, ScdA domain protein; Hemerythrin HHE cation binding domain protein; KEGG: cac:CAC0071 uncharacterized conserved protein, YtfE E.coli ortholog; hypothetical protein	complement(4515859..4516572)	Alkaliphilus metalliredigens QYMF	5314562
YP_001322135.1	CDS	Amet_4403	NC_009633.1	4516662	4517000	R	PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: gka:GK2186 hypothetical protein; MazG nucleotide pyrophosphohydrolase	complement(4516662..4517000)	Alkaliphilus metalliredigens QYMF	5314563
YP_001322136.1	CDS	Amet_4404	NC_009633.1	4516997	4518184	R	PFAM: sodium/hydrogen exchanger; KEGG: ctc:CTC02161 putative Na(+)/H(+) antiporter; sodium/hydrogen exchanger	complement(4516997..4518184)	Alkaliphilus metalliredigens QYMF	5314564
YP_001322137.1	CDS	Amet_4405	NC_009633.1	4518411	4520252	R	TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase, class-II; asparagine synthase; KEGG: cth:Cthe_0556 asparagine synthase (glutamine-hydrolyzing); asparagine synthase	complement(4518411..4520252)	Alkaliphilus metalliredigens QYMF	5314565
YP_001322138.1	CDS	Amet_4406	NC_009633.1	4520400	4521650	R	PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: cpr:CPR_0036 transporter, putative; hypothetical protein	complement(4520400..4521650)	Alkaliphilus metalliredigens QYMF	5314566
YP_001322139.1	CDS	Amet_4407	NC_009633.1	4521725	4524097	R	KEGG: cno:NT01CX_1207 sensory transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor signal transduction histidine kinase	complement(4521725..4524097)	Alkaliphilus metalliredigens QYMF	5314567
YP_001322140.1	CDS	Amet_4408	NC_009633.1	4524359	4525120	R	PFAM: Peptidoglycan-binding domain 1 protein; ErfK/YbiS/YcfS/YnhG family protein; KEGG: cac:CAC2416 uncharacterized protein, ErfK family; contains peptidoglycan-binding domain; ErfK/YbiS/YcfS/YnhG family protein	complement(4524359..4525120)	Alkaliphilus metalliredigens QYMF	5314568
YP_001322141.1	CDS	Amet_4409	NC_009633.1	4525515	4525799	R	hypothetical protein	complement(4525515..4525799)	Alkaliphilus metalliredigens QYMF	5314569
YP_001322142.1	CDS	Amet_4410	NC_009633.1	4526177	4526698	D	KEGG: cac:CA_P0023 hypothetical protein; hypothetical protein	4526177..4526698	Alkaliphilus metalliredigens QYMF	5314570
YP_001322143.1	CDS	Amet_4411	NC_009633.1	4526948	4528831	R	PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; KEGG: cno:NT01CX_0224 sensory transduction histidine kinase; integral membrane sensor signal transduction histidine kinase	complement(4526948..4528831)	Alkaliphilus metalliredigens QYMF	5314571
YP_001322144.1	CDS	Amet_4412	NC_009633.1	4529429	4529938	R	hypothetical protein	complement(4529429..4529938)	Alkaliphilus metalliredigens QYMF	5314572
YP_001322145.1	CDS	Amet_4414	NC_009633.1	4531294	4531515	R	hypothetical protein	complement(4531294..4531515)	Alkaliphilus metalliredigens QYMF	5314574
YP_001322146.1	CDS	Amet_4415	NC_009633.1	4531776	4533218	R	TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter; KEGG: ctc:CTC00235 potassium uptake protein trkH; TrkH family potassium uptake protein	complement(4531776..4533218)	Alkaliphilus metalliredigens QYMF	5314575
YP_001322147.1	CDS	trkA	NC_009633.1	4533169	4534578	R	involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; potassium transporter peripheral membrane protein	complement(4533169..4534578)	Alkaliphilus metalliredigens QYMF	5314576
YP_001322148.1	CDS	Amet_4417	NC_009633.1	4534596	4535042	R	hypothetical protein	complement(4534596..4535042)	Alkaliphilus metalliredigens QYMF	5314577
YP_001322149.1	CDS	Amet_4418	NC_009633.1	4535170	4536168	D	hypothetical protein	4535170..4536168	Alkaliphilus metalliredigens QYMF	5314578
YP_001322150.1	CDS	Amet_4419	NC_009633.1	4536178	4536810	R	PFAM: cyclase family protein; KEGG: tfu:Tfu_1722 conserved hypothetical protein; cyclase family protein	complement(4536178..4536810)	Alkaliphilus metalliredigens QYMF	5314579
YP_001322151.1	CDS	Amet_4420	NC_009633.1	4536803	4538755	R	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; Diverse 7TM receptor, transmembrane region; KEGG: swo:Swol_1622 response regulator receiver protein; sensor diguanylate cyclase	complement(4536803..4538755)	Alkaliphilus metalliredigens QYMF	5314580
YP_001322152.1	CDS	Amet_4421	NC_009633.1	4539115	4539909	R	PFAM: Linocin_M18 bacteriocin protein; KEGG: tma:TM0785 bacteriocin; Linocin_M18 bacteriocin protein	complement(4539115..4539909)	Alkaliphilus metalliredigens QYMF	5314581
YP_001322153.1	CDS	Amet_4422	NC_009633.1	4539923	4540285	R	KEGG: tma:TM0786 hypothetical protein; hypothetical protein	complement(4539923..4540285)	Alkaliphilus metalliredigens QYMF	5314582
YP_001322154.1	CDS	Amet_4423	NC_009633.1	4540531	4541352	R	PFAM: regulatory protein, MerR; transcription activator, effector binding; KEGG: bsu:BG12159 similar to multidrug-efflux transporter regulator; MerR family transcriptional regulator	complement(4540531..4541352)	Alkaliphilus metalliredigens QYMF	5314583
YP_001322155.1	CDS	Amet_4424	NC_009633.1	4541488	4542384	R	TIGRFAM: arginase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: ctc:CTC01763 arginase; arginase	complement(4541488..4542384)	Alkaliphilus metalliredigens QYMF	5314584
YP_001322156.1	CDS	Amet_4425	NC_009633.1	4542552	4543424	R	catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase	complement(4542552..4543424)	Alkaliphilus metalliredigens QYMF	5314585
YP_001322157.1	CDS	Amet_4426	NC_009633.1	4543470	4544198	R	TIGRFAM: lipoate-protein ligase B; PFAM: biotin/lipoate A/B protein ligase; KEGG: aba:Acid345_4305 lipoate-protein ligase B; lipoate-protein ligase B	complement(4543470..4544198)	Alkaliphilus metalliredigens QYMF	5314586
YP_001322158.1	CDS	Amet_4427	NC_009633.1	4544341	4544880	R	PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: dde:Dde_0046 pyruvate ferredoxin/flavodoxin oxidoreductase family protein; pyruvate ferredoxin/flavodoxin oxidoreductase	complement(4544341..4544880)	Alkaliphilus metalliredigens QYMF	5314587
YP_001322159.1	CDS	Amet_4428	NC_009633.1	4544877	4545629	R	PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: cth:Cthe_0865 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin); thiamine pyrophosphate binding domain-containing protein	complement(4544877..4545629)	Alkaliphilus metalliredigens QYMF	5314588
YP_001322160.1	CDS	Amet_4429	NC_009633.1	4545633	4546703	R	PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: cth:Cthe_0866 pyruvate flavodoxin/ferredoxin oxidoreductase-like protein; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein	complement(4545633..4546703)	Alkaliphilus metalliredigens QYMF	5314589
YP_001322161.1	CDS	Amet_4430	NC_009633.1	4546731	4546934	R	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: cth:Cthe_0867 4Fe-4S ferredoxin, iron-sulfur binding; 4Fe-4S ferredoxin	complement(4546731..4546934)	Alkaliphilus metalliredigens QYMF	5314590
YP_001322162.1	CDS	Amet_4431	NC_009633.1	4546960	4548036	R	catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate; butyrate kinase	complement(4546960..4548036)	Alkaliphilus metalliredigens QYMF	5314591
YP_001322163.1	CDS	Amet_4432	NC_009633.1	4548271	4549188	D	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: cac:CAC3409 transcriptional regulators, LysR family; LysR family transcriptional regulator	4548271..4549188	Alkaliphilus metalliredigens QYMF	5314592
YP_001322164.1	CDS	Amet_4433	NC_009633.1	4549290	4551644	R	KEGG: cno:NT01CX_1207 sensory transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor signal transduction histidine kinase	complement(4549290..4551644)	Alkaliphilus metalliredigens QYMF	5314593
YP_001322165.1	CDS	Amet_4434	NC_009633.1	4551988	4552584	R	KEGG: bld:BLi02966 hypothetical protein; hypothetical protein	complement(4551988..4552584)	Alkaliphilus metalliredigens QYMF	5314594
YP_001322166.1	CDS	Amet_4435	NC_009633.1	4552767	4553267	R	NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase	complement(4552767..4553267)	Alkaliphilus metalliredigens QYMF	5314595
YP_001322167.1	CDS	Amet_4436	NC_009633.1	4553379	4553936	R	PFAM: protein of unknown function DUF988; KEGG: stl:stu1551 conserved hypothetical, predicted membrane protein (TMS5); hypothetical protein	complement(4553379..4553936)	Alkaliphilus metalliredigens QYMF	5314596
YP_001322168.1	CDS	Amet_4437	NC_009633.1	4554345	4554905	R	PFAM: Rubrerythrin; Rubredoxin-type Fe(Cys)4 protein; KEGG: cth:Cthe_1771 rubrerythrin; rubrerythrin	complement(4554345..4554905)	Alkaliphilus metalliredigens QYMF	5314597
YP_001322169.1	CDS	Amet_4438	NC_009633.1	4555224	4556084	R	PFAM: protein of unknown function DUF610, YibQ; KEGG: btk:BT9727_1223 conserved hypothetical protein, possible divergent polysaccharide deacetylase; hypothetical protein	complement(4555224..4556084)	Alkaliphilus metalliredigens QYMF	5314598
YP_001322170.1	CDS	Amet_4439	NC_009633.1	4556199	4556582	D	KEGG: cno:NT01CX_2050 hypothetical protein; hypothetical protein	4556199..4556582	Alkaliphilus metalliredigens QYMF	5314599
YP_001322171.1	CDS	Amet_4440	NC_009633.1	4556769	4557479	R	TIGRFAM: N-acetylmuramoyl-L-alanine amidase CwlD; PFAM: cell wall hydrolase/autolysin; KEGG: tte:TTE2217 N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase CwlD	complement(4556769..4557479)	Alkaliphilus metalliredigens QYMF	5314600
YP_001322172.1	CDS	Amet_4441	NC_009633.1	4557752	4558027	D	hypothetical protein	4557752..4558027	Alkaliphilus metalliredigens QYMF	5314601
YP_001322173.1	CDS	rpsI	NC_009633.1	4558100	4558492	R	forms a direct contact with the tRNA during translation; 30S ribosomal protein S9	complement(4558100..4558492)	Alkaliphilus metalliredigens QYMF	5314602
YP_001322174.1	CDS	rplM	NC_009633.1	4558525	4558953	R	in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13	complement(4558525..4558953)	Alkaliphilus metalliredigens QYMF	5314603
YP_001322175.1	CDS	Amet_4444	NC_009633.1	4559073	4559840	R	TIGRFAM: tRNA pseudouridine synthase A; PFAM: tRNA pseudouridine synthase; KEGG: cth:Cthe_2939 tRNA pseudouridine synthase A; tRNA pseudouridine synthase A	complement(4559073..4559840)	Alkaliphilus metalliredigens QYMF	5314604
YP_001322176.1	CDS	Amet_4445	NC_009633.1	4559854	4560651	R	PFAM: cobalt transport protein; KEGG: cpf:CPF_2681 cobalt ABC transporter, permease protein; cobalt transport protein	complement(4559854..4560651)	Alkaliphilus metalliredigens QYMF	5314605
YP_001322177.1	CDS	cbiO	NC_009633.1	4560644	4561507	R	with CbiNQ forms the ABC transporter for cobalt import; Clostridia have two adjacent copies of this gene; cobalt transporter ATP-binding subunit	complement(4560644..4561507)	Alkaliphilus metalliredigens QYMF	5314606
YP_001322178.1	CDS	Amet_4447	NC_009633.1	4561483	4562331	R	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cno:NT01CX_1146 ABC transporter, ATP-binding protein; ABC transporter-like protein	complement(4561483..4562331)	Alkaliphilus metalliredigens QYMF	5314607
YP_001322179.1	CDS	rplQ	NC_009633.1	4562501	4562842	R	is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17	complement(4562501..4562842)	Alkaliphilus metalliredigens QYMF	5314608
YP_001322180.1	CDS	Amet_4449	NC_009633.1	4562865	4563812	R	catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha	complement(4562865..4563812)	Alkaliphilus metalliredigens QYMF	5314609
YP_001322181.1	CDS	rpsD	NC_009633.1	4563877	4564500	R	primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4	complement(4563877..4564500)	Alkaliphilus metalliredigens QYMF	5314610
YP_001322182.1	CDS	Amet_4451	NC_009633.1	4564523	4564921	R	located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11	complement(4564523..4564921)	Alkaliphilus metalliredigens QYMF	5314611
YP_001322183.1	CDS	rpsM	NC_009633.1	4564944	4565315	R	located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13	complement(4564944..4565315)	Alkaliphilus metalliredigens QYMF	5314612
YP_001322184.1	CDS	rpmJ	NC_009633.1	4565524	4565637	R	smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36	complement(4565524..4565637)	Alkaliphilus metalliredigens QYMF	5314613
YP_001322185.1	CDS	Amet_4454	NC_009633.1	4565661	4565879	R	TIGRFAM: translation initiation factor IF-1; PFAM: RNA binding S1 domain protein; S1, IF1 family protein; KEGG: cth:Cthe_2927 translation initiation factor IF-1; translation initiation factor IF-1	complement(4565661..4565879)	Alkaliphilus metalliredigens QYMF	5314614
YP_001322186.1	CDS	Amet_4455	NC_009633.1	4565909	4566193	R	KEGG: tte:TTE2269 hypothetical protein; hypothetical protein	complement(4565909..4566193)	Alkaliphilus metalliredigens QYMF	5314615
YP_001322187.1	CDS	Amet_4456	NC_009633.1	4566216	4566962	R	TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: tte:TTE2270 methionine aminopeptidase; methionine aminopeptidase	complement(4566216..4566962)	Alkaliphilus metalliredigens QYMF	5314616
YP_001322188.1	CDS	adk	NC_009633.1	4566965	4567612	R	essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase	complement(4566965..4567612)	Alkaliphilus metalliredigens QYMF	5314617
YP_001322189.1	CDS	Amet_4458	NC_009633.1	4567668	4568939	R	TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein; KEGG: tte:TTE2272 preprotein translocase subunit SecY; preprotein translocase subunit SecY	complement(4567668..4568939)	Alkaliphilus metalliredigens QYMF	5314618
YP_001322190.1	CDS	rplO	NC_009633.1	4568941	4569384	R	late assembly protein; 50S ribosomal protein L15	complement(4568941..4569384)	Alkaliphilus metalliredigens QYMF	5314619
YP_001322191.1	CDS	Amet_4460	NC_009633.1	4569404	4569583	R	PFAM: ribosomal protein L30; KEGG: abo:ABO_0415 50S ribosomal protein L30; 50S ribosomal protein L30	complement(4569404..4569583)	Alkaliphilus metalliredigens QYMF	5314620
YP_001322192.1	CDS	rpsE	NC_009633.1	4569597	4570106	R	located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5	complement(4569597..4570106)	Alkaliphilus metalliredigens QYMF	5314621
YP_001322193.1	CDS	rplR	NC_009633.1	4570134	4570502	R	binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18	complement(4570134..4570502)	Alkaliphilus metalliredigens QYMF	5314622
YP_001322194.1	CDS	rplF	NC_009633.1	4570522	4571061	R	ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6	complement(4570522..4571061)	Alkaliphilus metalliredigens QYMF	5314623
YP_001322195.1	CDS	rpsH	NC_009633.1	4571091	4571489	R	binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8	complement(4571091..4571489)	Alkaliphilus metalliredigens QYMF	5314624
YP_001322196.1	CDS	rpsN	NC_009633.1	4571513	4571698	R	located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif; 30S ribosomal protein S14	complement(4571513..4571698)	Alkaliphilus metalliredigens QYMF	5314625
YP_001322197.1	CDS	rplE	NC_009633.1	4571718	4572257	R	part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5	complement(4571718..4572257)	Alkaliphilus metalliredigens QYMF	5314626
YP_001322198.1	CDS	rplX	NC_009633.1	4572291	4572602	R	assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24	complement(4572291..4572602)	Alkaliphilus metalliredigens QYMF	5314627
YP_001322199.1	CDS	rplN	NC_009633.1	4572620	4572988	R	binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14	complement(4572620..4572988)	Alkaliphilus metalliredigens QYMF	5314628
YP_001322200.1	CDS	rpsQ	NC_009633.1	4573016	4573270	R	primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17	complement(4573016..4573270)	Alkaliphilus metalliredigens QYMF	5314629
YP_001322201.1	CDS	Amet_4470	NC_009633.1	4573303	4573506	R	one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29	complement(4573303..4573506)	Alkaliphilus metalliredigens QYMF	5314630
YP_001322202.1	CDS	rplP	NC_009633.1	4573496	4573939	R	located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16	complement(4573496..4573939)	Alkaliphilus metalliredigens QYMF	5314631
YP_001322203.1	CDS	Amet_4472	NC_009633.1	4573972	4574676	R	TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3-C-terminal domain protein; KH, type 2 domain protein; Ribosomal protein S3, N-terminal domain; SMART: KH domain protein; KEGG: cth:Cthe_2909 ribosomal protein S3; 30S ribosomal protein S3	complement(4573972..4574676)	Alkaliphilus metalliredigens QYMF	5314632
YP_001322204.1	CDS	rplV	NC_009633.1	4574696	4575028	R	binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22	complement(4574696..4575028)	Alkaliphilus metalliredigens QYMF	5314633
YP_001322205.1	CDS	rpsS	NC_009633.1	4575059	4575340	R	protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19	complement(4575059..4575340)	Alkaliphilus metalliredigens QYMF	5314634
YP_001322206.1	CDS	rplB	NC_009633.1	4575383	4576213	R	one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2	complement(4575383..4576213)	Alkaliphilus metalliredigens QYMF	5314635
YP_001322207.1	CDS	rplW	NC_009633.1	4576247	4576537	R	binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23	complement(4576247..4576537)	Alkaliphilus metalliredigens QYMF	5314636
YP_001322208.1	CDS	rplD	NC_009633.1	4576537	4577160	R	L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4	complement(4576537..4577160)	Alkaliphilus metalliredigens QYMF	5314637
YP_001322209.1	CDS	rplC	NC_009633.1	4577187	4577819	R	binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3	complement(4577187..4577819)	Alkaliphilus metalliredigens QYMF	5314638
YP_001322210.1	CDS	rpsJ	NC_009633.1	4577923	4578237	R	NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10	complement(4577923..4578237)	Alkaliphilus metalliredigens QYMF	5314639
YP_001322211.1	CDS	Amet_4480	NC_009633.1	4578581	4579774	R	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu	complement(4578581..4579774)	Alkaliphilus metalliredigens QYMF	5314640
YP_001322212.1	CDS	Amet_4481	NC_009633.1	4579900	4581969	R	EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G	complement(4579900..4581969)	Alkaliphilus metalliredigens QYMF	5314641
YP_001322213.1	CDS	Amet_4482	NC_009633.1	4582072	4582542	R	binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7	complement(4582072..4582542)	Alkaliphilus metalliredigens QYMF	5314642
YP_001322214.1	CDS	rpsL	NC_009633.1	4582697	4583116	R	interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12	complement(4582697..4583116)	Alkaliphilus metalliredigens QYMF	5314643
YP_001322215.1	CDS	Amet_4484	NC_009633.1	4583234	4583476	R	KEGG: mta:Moth_2466 ribosomal protein L7Ae/L30e/S12e/Gadd45; 50S ribosomal protein L7Ae/L30e/S12e/Gadd45	complement(4583234..4583476)	Alkaliphilus metalliredigens QYMF	5314644
YP_001322216.1	CDS	Amet_4485	NC_009633.1	4583610	4587125	R	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta'	complement(4583610..4587125)	Alkaliphilus metalliredigens QYMF	5314645
YP_001322217.1	CDS	rpoB	NC_009633.1	4587177	4590917	R	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta	complement(4587177..4590917)	Alkaliphilus metalliredigens QYMF	5314646
YP_001322218.1	CDS	rplL	NC_009633.1	4591366	4591728	R	present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12	complement(4591366..4591728)	Alkaliphilus metalliredigens QYMF	5314647
YP_001322219.1	CDS	rplJ	NC_009633.1	4591789	4592289	R	binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10	complement(4591789..4592289)	Alkaliphilus metalliredigens QYMF	5314648
YP_001322220.1	CDS	rplA	NC_009633.1	4592533	4593231	R	in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1	complement(4592533..4593231)	Alkaliphilus metalliredigens QYMF	5314649
YP_001322221.1	CDS	rplK	NC_009633.1	4593303	4593728	R	binds directly to 23S ribosomal RNA; 50S ribosomal protein L11	complement(4593303..4593728)	Alkaliphilus metalliredigens QYMF	5314650
YP_001322222.1	CDS	Amet_4491	NC_009633.1	4593813	4594331	R	TIGRFAM: transcription termination/antitermination factor NusG; PFAM: transcription antitermination protein NusG; SMART: NGN domain protein; KOW (Kyrpides, Ouzounis, Woese) domain protein; KEGG: cth:Cthe_2719 NusG antitermination factor; NusG antitermination factor	complement(4593813..4594331)	Alkaliphilus metalliredigens QYMF	5314651
YP_001322223.1	CDS	Amet_4492	NC_009633.1	4594392	4594607	R	TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; KEGG: dsy:DSY0453 hypothetical protein; preprotein translocase subunit SecE	complement(4594392..4594607)	Alkaliphilus metalliredigens QYMF	5314652
YP_001322224.1	CDS	rpmG	NC_009633.1	4594643	4594792	R	in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group have the CXXC motif; 50S ribosomal protein L33	complement(4594643..4594792)	Alkaliphilus metalliredigens QYMF	5314653
YP_001322225.1	CDS	Amet_4494	NC_009633.1	4594997	4596208	R	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu	complement(4594997..4596208)	Alkaliphilus metalliredigens QYMF	5314654
YP_001322226.1	CDS	Amet_4495	NC_009633.1	4596420	4597061	R	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; RNA polymerase factor sigma-70	complement(4596420..4597061)	Alkaliphilus metalliredigens QYMF	5314655
YP_001322227.1	CDS	Amet_4496	NC_009633.1	4597145	4597654	R	PFAM: protein of unknown function DUF901; KEGG: lmo:lmo0242 similar to B. subtilis Yacp protein; hypothetical protein	complement(4597145..4597654)	Alkaliphilus metalliredigens QYMF	5314656
YP_001322228.1	CDS	Amet_4497	NC_009633.1	4597670	4598416	R	TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase, substrate binding; KEGG: cth:Cthe_2060 RNA methyltransferase, TrmH family, group 3; RNA methyltransferase	complement(4597670..4598416)	Alkaliphilus metalliredigens QYMF	5314657
YP_001322229.1	CDS	thyX	NC_009633.1	4598449	4599222	R	flavin dependent thymidylate synthase; ThyX; thymidylate synthase complementing protein; catalyzes the formation of dTMP and tetrahydrofolate from dUMP and methylenetetrahydrofolate; the enzyme from Mycobacterium tuberculosis forms homotetramers; uses FAD as a cofactor; FAD-dependent thymidylate synthase	complement(4598449..4599222)	Alkaliphilus metalliredigens QYMF	5314658
YP_001322230.1	CDS	Amet_4499	NC_009633.1	4599219	4599590	R	hypothetical protein	complement(4599219..4599590)	Alkaliphilus metalliredigens QYMF	5314659
YP_001322231.1	CDS	Amet_4500	NC_009633.1	4599602	4600030	R	PFAM: ribonuclease III; KEGG: cth:Cthe_2061 hypothetical protein; ribonuclease III	complement(4599602..4600030)	Alkaliphilus metalliredigens QYMF	5314660
YP_001322232.1	CDS	cysS	NC_009633.1	4600172	4601566	R	catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase	complement(4600172..4601566)	Alkaliphilus metalliredigens QYMF	5314661
YP_001322233.1	CDS	Amet_4502	NC_009633.1	4601553	4602227	R	TIGRFAM: serine O-acetyltransferase; KEGG: tte:TTE2316 serine acetyltransferase; serine O-acetyltransferase	complement(4601553..4602227)	Alkaliphilus metalliredigens QYMF	5314662
YP_001322234.1	CDS	gltX	NC_009633.1	4602534	4604015	R	Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase	complement(4602534..4604015)	Alkaliphilus metalliredigens QYMF	5314663
YP_001322235.1	CDS	Amet_4504	NC_009633.1	4604105	4604929	R	PFAM: protein of unknown function DUF1002; KEGG: tte:TTE1117 hypothetical protein; hypothetical protein	complement(4604105..4604929)	Alkaliphilus metalliredigens QYMF	5314664
YP_001322236.1	CDS	Amet_4505	NC_009633.1	4605028	4605507	R	TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: MECDP-synthase; KEGG: cno:NT01CX_0736 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	complement(4605028..4605507)	Alkaliphilus metalliredigens QYMF	5314665
YP_001322237.1	CDS	ispD	NC_009633.1	4605492	4606217	R	4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	complement(4605492..4606217)	Alkaliphilus metalliredigens QYMF	5314666
YP_001322238.1	CDS	Amet_4507	NC_009633.1	4606339	4607442	R	PFAM: PilT protein domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: Nucleotide binding protein, PINc; KEGG: ctc:CTC02627 pili retraction protein PilT; PilT domain-containing protein	complement(4606339..4607442)	Alkaliphilus metalliredigens QYMF	5314667
YP_001322239.1	CDS	Amet_4508	NC_009633.1	4607565	4608044	R	PFAM: transcription factor CarD; KEGG: mta:Moth_2489 transcriptional regulator, CarD family; CarD family transcriptional regulator	complement(4607565..4608044)	Alkaliphilus metalliredigens QYMF	5314668
YP_001322240.1	CDS	Amet_4509	NC_009633.1	4608333	4608728	D	KEGG: sth:STH3126 hypothetical protein; hypothetical protein	4608333..4608728	Alkaliphilus metalliredigens QYMF	5314669
YP_001322241.1	CDS	Amet_4510	NC_009633.1	4608787	4609863	R	non-specific DNA-binding; scans chromosomes during sporulation for DNA-damage; delays initiation of sporulation; participates in a checkpoint signaling cascade for cell-cycle progression and DNA repair; DNA integrity scanning protein DisA	complement(4608787..4609863)	Alkaliphilus metalliredigens QYMF	5314670
YP_001322242.1	CDS	Amet_4511	NC_009633.1	4610029	4611396	R	Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA	complement(4610029..4611396)	Alkaliphilus metalliredigens QYMF	5314671
YP_001322243.1	CDS	Amet_4512	NC_009633.1	4611745	4614183	R	PFAM: UvrB/UvrC protein; AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: tte:TTE2327 ATPases with chaperone activity, ATP-binding subunit; ATPase	complement(4611745..4614183)	Alkaliphilus metalliredigens QYMF	5314672
YP_001322244.1	CDS	Amet_4513	NC_009633.1	4614196	4615221	R	PFAM: ATP:guanido phosphotransferase; KEGG: cth:Cthe_1790 ATP:guanido phosphotransferase; ATP:guanido phosphotransferase	complement(4614196..4615221)	Alkaliphilus metalliredigens QYMF	5314673
YP_001322245.1	CDS	Amet_4514	NC_009633.1	4615233	4615742	R	PFAM: UvrB/UvrC protein; KEGG: tte:TTE2329 hypothetical protein; UvrB/UvrC protein	complement(4615233..4615742)	Alkaliphilus metalliredigens QYMF	5314674
YP_001322246.1	CDS	Amet_4515	NC_009633.1	4616020	4618089	R	TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: elongation factor G domain protein; protein synthesis factor, GTP-binding; GTP-binding protein, HSR1-related; elongation factor Tu, domain 2 protein; elongation factor G, domain IV; Miro domain protein; KEGG: tte:TTE2333 translation elongation and release factors (GTPases); translation elongation factor G	complement(4616020..4618089)	Alkaliphilus metalliredigens QYMF	5314675
YP_001322247.1	CDS	Amet_4516	NC_009633.1	4618340	4619416	D	TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase, class I and II; KEGG: mta:Moth_0515 histidinol-phosphate aminotransferase; histidinol-phosphate aminotransferase	4618340..4619416	Alkaliphilus metalliredigens QYMF	5314676
YP_001322248.1	CDS	Amet_4517	NC_009633.1	4619580	4620062	D	PFAM: superoxide dismutase, copper/zinc binding; KEGG: ctc:CTC00590 superoxide dismutase (Cu-Zn); superoxide dismutase, copper/zinc binding	4619580..4620062	Alkaliphilus metalliredigens QYMF	5314677
YP_001322249.1	CDS	Amet_4518	NC_009633.1	4620069	4621022	R	KEGG: dar:Daro_3104 hypothetical protein; hypothetical protein	complement(4620069..4621022)	Alkaliphilus metalliredigens QYMF	5314678
YP_001322250.1	CDS	Amet_4519	NC_009633.1	4621309	4622589	D	PFAM: Chloride channel, core; KEGG: mtp:Mthe_1465 Cl-channel, voltage-gated family protein; chloride channel core protein	4621309..4622589	Alkaliphilus metalliredigens QYMF	5314679
YP_001322251.1	CDS	Amet_4520	NC_009633.1	4622709	4625063	R	TIGRFAM: ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent; PFAM: ATP-cone domain protein; KEGG: lac:LBA0041 ribonucleoside triphosphate reductase; ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent	complement(4622709..4625063)	Alkaliphilus metalliredigens QYMF	5314680
YP_001322252.1	CDS	Amet_4521	NC_009633.1	4625283	4626491	R	KEGG: sth:STH1268 hypothetical protein; hypothetical protein	complement(4625283..4626491)	Alkaliphilus metalliredigens QYMF	5314681
YP_001322253.1	CDS	Amet_4522	NC_009633.1	4626621	4627130	R	KEGG: tte:TTE2338 hypothetical protein; hypothetical protein	complement(4626621..4627130)	Alkaliphilus metalliredigens QYMF	5314682
YP_001322254.1	CDS	Amet_4523	NC_009633.1	4627381	4628226	R	converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA; 3-hydroxybutyryl-CoA dehydrogenase	complement(4627381..4628226)	Alkaliphilus metalliredigens QYMF	5314683
YP_001322255.1	CDS	Amet_4524	NC_009633.1	4634059	4635558	R	TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase, class II (D, K and N); nucleic acid binding, OB-fold, tRNA/helicase-type; KEGG: tte:TTE2372 lysyl-tRNA synthetase class II; lysyl-tRNA synthetase	complement(4634059..4635558)	Alkaliphilus metalliredigens QYMF	5314687
YP_001322256.1	CDS	greA	NC_009633.1	4635577	4636053	R	necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA	complement(4635577..4636053)	Alkaliphilus metalliredigens QYMF	5314688
YP_001322257.1	CDS	Amet_4526	NC_009633.1	4636336	4637259	R	KEGG: tte:TTE2375 hypothetical protein; hypothetical protein	complement(4636336..4637259)	Alkaliphilus metalliredigens QYMF	5314689
YP_001322258.1	CDS	Amet_4527	NC_009633.1	4637425	4638390	R	TIGRFAM: putative TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase, DuS; dihydroorotate dehydrogenase; KEGG: tte:TTE0344 predicted TIM-barrel enzyme, possibly dehydrogenase, nifR3 family; nifR3 family TIM-barrel protein	complement(4637425..4638390)	Alkaliphilus metalliredigens QYMF	5314690
YP_001322259.1	CDS	Amet_4528	NC_009633.1	4638447	4639253	R	type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase	complement(4638447..4639253)	Alkaliphilus metalliredigens QYMF	5314691
YP_001322260.1	CDS	Amet_4529	NC_009633.1	4639282	4639806	R	KEGG: tte:TTE2382 membrane protein; membrane protein	complement(4639282..4639806)	Alkaliphilus metalliredigens QYMF	5314692
YP_001322261.1	CDS	Amet_4530	NC_009633.1	4639936	4640775	R	PFAM: chemotaxis sensory transducer; KEGG: bld:BLi00758 YfmS; methyl-accepting chemotaxis sensory transducer	complement(4639936..4640775)	Alkaliphilus metalliredigens QYMF	5314693
YP_001322262.1	CDS	Amet_4531	NC_009633.1	4641050	4642333	R	PFAM: Gluconate transporter; Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: bha:BH3897 hypothetical protein; citrate transporter	complement(4641050..4642333)	Alkaliphilus metalliredigens QYMF	5314694
YP_001322263.1	CDS	Amet_4532	NC_009633.1	4642364	4643917	R	PFAM: coenzyme A transferase; KEGG: bha:BH3898 acetyl-CoA:acetoacetyl-CoA transferase; coenzyme A transferase	complement(4642364..4643917)	Alkaliphilus metalliredigens QYMF	5314695
YP_001322264.1	CDS	Amet_4533	NC_009633.1	4644242	4645639	R	PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: PAS domain containing protein; AAA ATPase; KEGG: btl:BALH_2657 sensory box sigma-54 dependent DNA-binding response regulator; sigma-54 dependent trancsriptional regulator	complement(4644242..4645639)	Alkaliphilus metalliredigens QYMF	5314696
YP_001322265.1	CDS	Amet_4534	NC_009633.1	4645714	4646694	R	TIGRFAM: biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; Helix-turn-helix, type 11 domain protein; KEGG: cno:NT01CX_0898 BirA bifunctional protein, putative; biotin--acetyl-CoA-carboxylase ligase	complement(4645714..4646694)	Alkaliphilus metalliredigens QYMF	5314697
YP_001322266.1	CDS	Amet_4535	NC_009633.1	4646935	4648173	R	TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; PFAM: Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit; KEGG: saz:Sama_1053 oxaloacetate decarboxylase; sodium ion-translocating decarboxylase subunit beta	complement(4646935..4648173)	Alkaliphilus metalliredigens QYMF	5314698
YP_001322267.1	CDS	Amet_4536	NC_009633.1	4648211	4648597	R	PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: cth:Cthe_0700 biotin/lipoyl attachment protein; biotin/lipoyl attachment domain-containing protein	complement(4648211..4648597)	Alkaliphilus metalliredigens QYMF	5314699
YP_001322268.1	CDS	Amet_4537	NC_009633.1	4648620	4649021	R	PFAM: sodium pump decarboxylase, gamma subunit; sodium pump decarboxylase subunit gamma	complement(4648620..4649021)	Alkaliphilus metalliredigens QYMF	5314700
YP_001322269.1	CDS	Amet_4538	NC_009633.1	4649057	4650604	R	PFAM: carboxyl transferase; KEGG: tte:TTE2385 Acetyl-CoA carboxylase alpha subunit; carboxyl transferase	complement(4649057..4650604)	Alkaliphilus metalliredigens QYMF	5314701
YP_001322270.1	CDS	Amet_4539	NC_009633.1	4650675	4651085	R	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sfu:Sfum_0455 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase	complement(4650675..4651085)	Alkaliphilus metalliredigens QYMF	5314702
YP_001322271.1	CDS	Amet_4540	NC_009633.1	4651100	4652041	R	TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein; SMART: AAA ATPase; KEGG: tko:TK0329 lysine/arginine/ornithine transport system kinase; LAO/AO transport system ATPase	complement(4651100..4652041)	Alkaliphilus metalliredigens QYMF	5314703
YP_001322272.1	CDS	Amet_4541	NC_009633.1	4652064	4652462	R	PFAM: cobalamin B12-binding domain protein; KEGG: tte:TTE2388 methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding); cobalamin B12-binding domain-containing protein	complement(4652064..4652462)	Alkaliphilus metalliredigens QYMF	5314704
YP_001322273.1	CDS	Amet_4542	NC_009633.1	4652489	4654168	R	TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; KEGG: tte:TTE2389 Methylmalonyl-CoA mutase, N-terminal domain/subunit; methylmalonyl-CoA mutase large subunit	complement(4652489..4654168)	Alkaliphilus metalliredigens QYMF	5314705
YP_001322274.1	CDS	Amet_4543	NC_009633.1	4654603	4656672	R	TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase, central domain protein; peptidase M41, FtsH extracellular; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: tte:TTE2393 ATP-dependent Zn proteases; ATP-dependent metalloprotease FtsH	complement(4654603..4656672)	Alkaliphilus metalliredigens QYMF	5314706
YP_001322275.1	CDS	Amet_4544	NC_009633.1	4656789	4658192	R	TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; KEGG: tte:TTE2395 predicted ATPase of the PP-loop superfamily implicated in cell cycle control; tRNA(Ile)-lysidine synthetase	complement(4656789..4658192)	Alkaliphilus metalliredigens QYMF	5314707
YP_001322276.1	CDS	Amet_4545	NC_009633.1	4658349	4659248	R	PFAM: protein kinase; SMART: serine/threonine protein kinase; KEGG: oih:OB0076 serine:threonine protein kinase; protein kinase	complement(4658349..4659248)	Alkaliphilus metalliredigens QYMF	5314708
YP_001322277.1	CDS	Amet_4546	NC_009633.1	4659337	4660074	R	KEGG: bsu:BG10128 similar to unknown proteins; hypothetical protein	complement(4659337..4660074)	Alkaliphilus metalliredigens QYMF	5314709
YP_001322278.1	CDS	Amet_4547	NC_009633.1	4660272	4660403	R	hypothetical protein	complement(4660272..4660403)	Alkaliphilus metalliredigens QYMF	5314710
YP_001322279.1	CDS	Amet_4548	NC_009633.1	4660448	4661203	R	PFAM: cobalamin B12-binding domain protein; KEGG: tte:TTE0727 D-lysine 5,6-aminomutase beta subunit; cobalamin B12-binding domain-containing protein	complement(4660448..4661203)	Alkaliphilus metalliredigens QYMF	5314711
YP_001322280.1	CDS	Amet_4549	NC_009633.1	4661203	4662759	R	PFAM: D-Lysine 5,6-aminomutase alpha subunit; KEGG: tte:TTE0726 D-lysine 5,6-aminomutase alpha subunit; D-lysine 5,6-aminomutase alpha subunit	complement(4661203..4662759)	Alkaliphilus metalliredigens QYMF	5314712
YP_001322281.1	CDS	Amet_4550	NC_009633.1	4662792	4664441	R	PFAM: DNA mismatch repair protein MutS domain protein; SMART: MutS III domain protein; KEGG: tte:TTE0725 MutS-like ATPase involved in mismatch repair, family 2; DNA mismatch repair protein MutS domain-containing protein	complement(4662792..4664441)	Alkaliphilus metalliredigens QYMF	5314713
YP_001322282.1	CDS	Amet_4551	NC_009633.1	4664434	4665477	R	KEGG: tte:TTE0724 hypothetical protein; hypothetical protein	complement(4664434..4665477)	Alkaliphilus metalliredigens QYMF	5314714
YP_001322283.1	CDS	Amet_4552	NC_009633.1	4665510	4666754	R	TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein; KEGG: ctc:CTC00890 L-lysine 2,3-aminomutase; lysine 2,3-aminomutase YodO family protein	complement(4665510..4666754)	Alkaliphilus metalliredigens QYMF	5314715
YP_001322284.1	CDS	Amet_4553	NC_009633.1	4666776	4667813	R	KEGG: pgi:PG1069 alcohol dehydrogenase, zinc-containing, putative; zinc-containing alcohol dehydrogenase	complement(4666776..4667813)	Alkaliphilus metalliredigens QYMF	5314716
YP_001322285.1	CDS	Amet_4554	NC_009633.1	4668068	4669468	R	TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; AAA ATPase; KEGG: tte:TTE0717 NtrC family transcriptional regulator, ATPase domain; sigma-54 dependent trancsriptional regulator	complement(4668068..4669468)	Alkaliphilus metalliredigens QYMF	5314717
YP_001322286.1	CDS	Amet_4555	NC_009633.1	4669562	4670701	R	PFAM: putative RNA methylase; KEGG: dsy:DSY2076 hypothetical protein; putative RNA methylase	complement(4669562..4670701)	Alkaliphilus metalliredigens QYMF	5314718
YP_001322287.1	CDS	Amet_4556	NC_009633.1	4670816	4671136	R	hypothetical protein	complement(4670816..4671136)	Alkaliphilus metalliredigens QYMF	5314719
YP_001322288.1	CDS	Amet_4558	NC_009633.1	4671401	4672336	R	PFAM: metallophosphoesterase; KEGG: bca:BCE_2541 hypothetical protein; metallophosphoesterase	complement(4671401..4672336)	Alkaliphilus metalliredigens QYMF	5314721
YP_001322289.1	CDS	Amet_4559	NC_009633.1	4672450	4673061	R	hypothetical protein	complement(4672450..4673061)	Alkaliphilus metalliredigens QYMF	5314722
YP_001322290.1	CDS	Amet_4560	NC_009633.1	4673569	4674918	D	catalyzes the reduction of hydroxylamine to ammonia and water; hydroxylamine reductase	4673569..4674918	Alkaliphilus metalliredigens QYMF	5314723
YP_001322291.1	CDS	Amet_4561	NC_009633.1	4675517	4676032	D	KEGG: ctc:CTC00833 putative tryptophan transport protein; putative tryptophan transport protein	4675517..4676032	Alkaliphilus metalliredigens QYMF	5314724
YP_001322292.1	CDS	Amet_4562	NC_009633.1	4676224	4677399	R	catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase	complement(4676224..4677399)	Alkaliphilus metalliredigens QYMF	5314725
YP_001322293.1	CDS	Amet_4563	NC_009633.1	4677649	4678437	R	KEGG: mta:Moth_2002 biotin/lipoyl attachment; biotin/lipoyl attachment	complement(4677649..4678437)	Alkaliphilus metalliredigens QYMF	5314726
YP_001322294.1	CDS	Amet_4564	NC_009633.1	4678431	4679234	R	PFAM: protein of unknown function DUF182; KEGG: aba:Acid345_2647 protein of unknown function DUF182; hypothetical protein	complement(4678431..4679234)	Alkaliphilus metalliredigens QYMF	5314727
YP_001322295.1	CDS	Amet_4565	NC_009633.1	4679235	4679813	R	KEGG: gme:Gmet_2140 conserved hypothetical protein, possibly involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein	complement(4679235..4679813)	Alkaliphilus metalliredigens QYMF	5314728
YP_001322296.1	CDS	Amet_4566	NC_009633.1	4679824	4680603	R	KEGG: dsy:DSY0867 hypothetical protein; hypothetical protein	complement(4679824..4680603)	Alkaliphilus metalliredigens QYMF	5314729
YP_001322297.1	CDS	Amet_4567	NC_009633.1	4680613	4682331	R	TIGRFAM: adenine deaminase; PFAM: amidohydrolase; KEGG: cac:CAC0887 adenine deaminase; adenine deaminase	complement(4680613..4682331)	Alkaliphilus metalliredigens QYMF	5314730
YP_001322298.1	CDS	Amet_4568	NC_009633.1	4682345	4683322	R	PFAM: aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: mta:Moth_1225 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; molybdopterin binding aldehyde oxidase and xanthine dehydrogenase	complement(4682345..4683322)	Alkaliphilus metalliredigens QYMF	5314731
YP_001322299.1	CDS	Amet_4569	NC_009633.1	4683324	4684595	R	PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: mta:Moth_1226 aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase	complement(4683324..4684595)	Alkaliphilus metalliredigens QYMF	5314732
YP_001322300.1	CDS	Amet_4570	NC_009633.1	4684579	4685067	R	PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: chy:CHY_0691 2Fe-2S iron-sulfur cluster binding domain; 2Fe-2S iron-sulfur cluster binding domain-containing protein	complement(4684579..4685067)	Alkaliphilus metalliredigens QYMF	5314733
YP_001322301.1	CDS	Amet_4571	NC_009633.1	4685114	4685980	R	PFAM: molybdopterin dehydrogenase, FAD-binding; KEGG: chy:CHY_0690 carbon monoxide dehydrogenase, medium subunit; FAD-binding molybdopterin dehydrogenase	complement(4685114..4685980)	Alkaliphilus metalliredigens QYMF	5314734
YP_001322302.1	CDS	Amet_4572	NC_009633.1	4686028	4687365	R	Catalyzes the hydrolytic cleavage of a carbon-halogen bond in N-ethylammeline; N-ethylammeline chlorohydrolase	complement(4686028..4687365)	Alkaliphilus metalliredigens QYMF	5314735
YP_001322303.1	CDS	Amet_4573	NC_009633.1	4687631	4688980	R	PFAM: Xanthine/uracil/vitamin C permease; KEGG: cpf:CPF_1827 xanthine/uracil permease family protein; xanthine/uracil/vitamin C permease	complement(4687631..4688980)	Alkaliphilus metalliredigens QYMF	5314736
YP_001322304.1	CDS	Amet_4574	NC_009633.1	4689181	4690995	R	TIGRFAM: adenine deaminase; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: chy:CHY_0689 adenine deaminase; adenine deaminase	complement(4689181..4690995)	Alkaliphilus metalliredigens QYMF	5314737
YP_001322305.1	CDS	Amet_4575	NC_009633.1	4691018	4691290	R	PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; KEGG: chy:CHY_0688 ethanolamine utilization protein EutN; ethanolamine utilization protein EutN/carboxysome structural protein Ccml	complement(4691018..4691290)	Alkaliphilus metalliredigens QYMF	5314738
YP_001322306.1	CDS	Amet_4576	NC_009633.1	4691316	4692104	R	KEGG: rpc:RPC_1171 hypothetical protein; hypothetical protein	complement(4691316..4692104)	Alkaliphilus metalliredigens QYMF	5314739
YP_001322307.1	CDS	Amet_4577	NC_009633.1	4692122	4692400	R	PFAM: microcompartments protein; KEGG: lmo:lmo1159 hypothetical protein; microcompartments protein	complement(4692122..4692400)	Alkaliphilus metalliredigens QYMF	5314740
YP_001322308.1	CDS	Amet_4578	NC_009633.1	4692449	4692829	R	PFAM: microcompartments protein; KEGG: chy:CHY_0684 bacterial microcompartments family protein; microcompartments protein	complement(4692449..4692829)	Alkaliphilus metalliredigens QYMF	5314741
YP_001322309.1	CDS	Amet_4579	NC_009633.1	4692841	4693392	R	hypothetical protein	complement(4692841..4693392)	Alkaliphilus metalliredigens QYMF	5314742
YP_001322310.1	CDS	Amet_4580	NC_009633.1	4693407	4693685	R	PFAM: microcompartments protein; KEGG: chy:CHY_0682 propanediol utilization protein PduA; microcompartments protein	complement(4693407..4693685)	Alkaliphilus metalliredigens QYMF	5314743
YP_001322311.1	CDS	Amet_4581	NC_009633.1	4693704	4695059	R	TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein; KEGG: chy:CHY_0681 3-octaprenyl-4-hydroxybenzoate carboxy-lyase family protein; UbiD family decarboxylase	complement(4693704..4695059)	Alkaliphilus metalliredigens QYMF	5314744
YP_001322312.1	CDS	Amet_4582	NC_009633.1	4695075	4695632	R	TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; KEGG: chy:CHY_0680 putative 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase	complement(4695075..4695632)	Alkaliphilus metalliredigens QYMF	5314745
YP_001322313.1	CDS	Amet_4583	NC_009633.1	4695719	4696321	R	PFAM: isochorismatase hydrolase; KEGG: chy:CHY_0679 isochorismatase family protein; isochorismatase hydrolase	complement(4695719..4696321)	Alkaliphilus metalliredigens QYMF	5314746
YP_001322314.1	CDS	Amet_4584	NC_009633.1	4696365	4697780	R	TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: chy:CHY_0678 allantoinase; dihydroorotase, multifunctional complex type	complement(4696365..4697780)	Alkaliphilus metalliredigens QYMF	5314747
YP_001322315.1	CDS	Amet_4585	NC_009633.1	4697805	4699475	R	PFAM: formate-tetrahydrofolate ligase, FTHFS; KEGG: mta:Moth_0109 formate--tetrahydrofolate ligase; formate--tetrahydrofolate ligase	complement(4697805..4699475)	Alkaliphilus metalliredigens QYMF	5314748
YP_001322316.1	CDS	Amet_4586	NC_009633.1	4699488	4700396	R	TIGRFAM: glutamate formiminotransferase; PFAM: Formiminotransferase domain protein; Formiminotransferase-like; KEGG: chy:CHY_0695 glutamate formiminotransferase; glutamate formiminotransferase	complement(4699488..4700396)	Alkaliphilus metalliredigens QYMF	5314749
YP_001322317.1	CDS	Amet_4587	NC_009633.1	4700718	4701410	D	PFAM: cyclase family protein; KEGG: chy:CHY_0702 putative cyclase; cyclase family protein	4700718..4701410	Alkaliphilus metalliredigens QYMF	5314750
YP_001322318.1	CDS	Amet_4588	NC_009633.1	4701505	4703160	R	PFAM: purine catabolism PurC domain protein; KEGG: mta:Moth_2125 transcriptional regulator, CdaR; transcriptional regulator CdaR	complement(4701505..4703160)	Alkaliphilus metalliredigens QYMF	5314751
YP_001322319.1	CDS	Amet_4589	NC_009633.1	4703389	4704033	R	PFAM: Formiminotransferase-cyclodeaminase; KEGG: tde:TDE0046 formiminotransferase-cyclodeaminase family protein; formiminotransferase-cyclodeaminase	complement(4703389..4704033)	Alkaliphilus metalliredigens QYMF	5314752
YP_001322320.1	CDS	Amet_4590	NC_009633.1	4704184	4704609	R	PFAM: Domain of unknown function DUF1934; KEGG: tte:TTE2534 hypothetical protein; hypothetical protein	complement(4704184..4704609)	Alkaliphilus metalliredigens QYMF	5314753
YP_001322321.1	CDS	Amet_4591	NC_009633.1	4704634	4705734	R	TIGRFAM: D-alanine--D-alanine ligase; PFAM: ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp; protein of unknown function DUF201; D-alanine--D-alanine ligase domain protein; RimK domain protein ATP-grasp; KEGG: cth:Cthe_1938 D-alanine--D-alanine ligase; D-alanine--D-alanine ligase	complement(4704634..4705734)	Alkaliphilus metalliredigens QYMF	5314754
YP_001322322.1	CDS	Amet_4592	NC_009633.1	4705875	4706546	R	TIGRFAM: Sporulation stage II, protein R; KEGG: cth:Cthe_1920 stage II sporulation protein R; sporulation stage II, protein R	complement(4705875..4706546)	Alkaliphilus metalliredigens QYMF	5314755
YP_001322323.1	CDS	Amet_4593	NC_009633.1	4706792	4707256	R	KEGG: gka:GK0611 hypothetical protein; hypothetical protein	complement(4706792..4707256)	Alkaliphilus metalliredigens QYMF	5314756
YP_001322324.1	CDS	Amet_4594	NC_009633.1	4707271	4708275	R	hypothetical protein	complement(4707271..4708275)	Alkaliphilus metalliredigens QYMF	5314757
YP_001322325.1	CDS	Amet_4595	NC_009633.1	4708452	4709717	R	KEGG: cac:CAC2600 predicted membrane protein; membrane protein	complement(4708452..4709717)	Alkaliphilus metalliredigens QYMF	5314758
YP_001322326.1	CDS	Amet_4596	NC_009633.1	4709764	4710255	R	hypothetical protein	complement(4709764..4710255)	Alkaliphilus metalliredigens QYMF	5314759
YP_001322327.1	CDS	Amet_4597	NC_009633.1	4710340	4711440	R	TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: tte:TTE2554 spore germination protein homolog YndE; spore germination protein	complement(4710340..4711440)	Alkaliphilus metalliredigens QYMF	5314760
YP_001322328.1	CDS	Amet_4598	NC_009633.1	4711444	4712553	R	TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: tte:TTE2554 spore germination protein homolog YndE; spore germination protein	complement(4711444..4712553)	Alkaliphilus metalliredigens QYMF	5314761
YP_001322329.1	CDS	Amet_4599	NC_009633.1	4712577	4713815	R	PFAM: spore germination B3 GerAC family protein; KEGG: tte:TTE2553 germination protein; spore germination B3 GerAC family protein	complement(4712577..4713815)	Alkaliphilus metalliredigens QYMF	5314762
YP_001322330.1	CDS	Amet_4600	NC_009633.1	4713843	4715423	R	PFAM: GerA spore germination protein; KEGG: tte:TTE2555 putative spore germination protein; GerA spore germination protein	complement(4713843..4715423)	Alkaliphilus metalliredigens QYMF	5314763
YP_001322331.1	CDS	Amet_4601	NC_009633.1	4715442	4715657	R	hypothetical protein	complement(4715442..4715657)	Alkaliphilus metalliredigens QYMF	5314764
YP_001322332.1	CDS	Amet_4602	NC_009633.1	4715773	4716525	R	KEGG: tte:TTE2557 hypothetical protein; hypothetical protein	complement(4715773..4716525)	Alkaliphilus metalliredigens QYMF	5314765
YP_001322333.1	CDS	Amet_4603	NC_009633.1	4716551	4717252	R	PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: cth:Cthe_2404 transcriptional regulator, GntR family; GntR family transcriptional regulator	complement(4716551..4717252)	Alkaliphilus metalliredigens QYMF	5314766
YP_001322334.1	CDS	ipk	NC_009633.1	4717245	4718120	R	An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase	complement(4717245..4718120)	Alkaliphilus metalliredigens QYMF	5314767
YP_001322335.1	CDS	Amet_4605	NC_009633.1	4718315	4719886	R	PFAM: Peptidoglycan-binding LysM; KEGG: cth:Cthe_2402 peptidoglycan-binding LysM; peptidoglycan-binding protein LysM	complement(4718315..4719886)	Alkaliphilus metalliredigens QYMF	5314768
YP_001322336.1	CDS	Amet_4606	NC_009633.1	4720091	4722388	R	KEGG: tte:TTE0861 hypothetical protein; hypothetical protein	complement(4720091..4722388)	Alkaliphilus metalliredigens QYMF	5314769
YP_001322337.1	CDS	Amet_4607	NC_009633.1	4722571	4723533	R	catalyzes the reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP; carbamate kinase	complement(4722571..4723533)	Alkaliphilus metalliredigens QYMF	5314770
YP_001322338.1	CDS	Amet_4608	NC_009633.1	4723626	4724618	R	catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway; ornithine carbamoyltransferase	complement(4723626..4724618)	Alkaliphilus metalliredigens QYMF	5314771
YP_001322339.1	CDS	Amet_4609	NC_009633.1	4724677	4725897	R	PFAM: amidinotransferase; KEGG: tte:TTE0531 Arginine deiminase; arginine deiminase	complement(4724677..4725897)	Alkaliphilus metalliredigens QYMF	5314772
YP_001322340.1	CDS	Amet_4610	NC_009633.1	4726060	4726326	R	PFAM: protein of unknown function DUF1021; KEGG: cth:Cthe_2401 protein of unknown function DUF1021; hypothetical protein	complement(4726060..4726326)	Alkaliphilus metalliredigens QYMF	5314773
YP_001322341.1	CDS	Amet_4611	NC_009633.1	4726482	4727912	R	TIGRFAM: SpoIID/LytB domain protein; PFAM: cell wall hydrolase/autolysin; KEGG: gka:GK3340 stage II sporulation protein D; SpoIID/LytB domain-containing protein	complement(4726482..4727912)	Alkaliphilus metalliredigens QYMF	5314774
YP_001322342.1	CDS	Amet_4612	NC_009633.1	4728097	4728534	R	PFAM: regulatory protein, MarR; KEGG: ctc:CTC00126 transcriptional regulator, marR family; MarR family transcriptional regulator	complement(4728097..4728534)	Alkaliphilus metalliredigens QYMF	5314775
YP_001322343.1	CDS	Amet_4613	NC_009633.1	4728721	4728885	D	KEGG: swo:Swol_0466 hypothetical protein; hypothetical protein	4728721..4728885	Alkaliphilus metalliredigens QYMF	5314776
YP_001322344.1	CDS	Amet_4614	NC_009633.1	4729005	4729184	R	hypothetical protein	complement(4729005..4729184)	Alkaliphilus metalliredigens QYMF	5314777
YP_001322345.1	CDS	Amet_4615	NC_009633.1	4729482	4729985	D	Contains selenocysteine; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: gme:Gmet_2723 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase	4729482..4729985	Alkaliphilus metalliredigens QYMF	5314778
YP_001322346.1	CDS	Amet_4616	NC_009633.1	4730052	4731554	R	catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase	complement(4730052..4731554)	Alkaliphilus metalliredigens QYMF	5314779
YP_001322347.1	CDS	Amet_4617	NC_009633.1	4732178	4733587	D	PFAM: Citrate transporter; Na+/H+ antiporter NhaC; KEGG: bce:BC0373 Na+/H+ antiporter NnaC; Na+/H+ antiporter NhaC	4732178..4733587	Alkaliphilus metalliredigens QYMF	5314780
YP_001322348.1	CDS	Amet_4618	NC_009633.1	4733678	4734100	R	hypothetical protein	complement(4733678..4734100)	Alkaliphilus metalliredigens QYMF	5314781
YP_001322349.1	CDS	Amet_4619	NC_009633.1	4734193	4734822	R	PFAM: FMN-binding domain protein; KEGG: dsy:DSY3139 putative fumarate reductase flavoprotein subunit; FMN-binding domain-containing protein	complement(4734193..4734822)	Alkaliphilus metalliredigens QYMF	5314782
YP_001322350.1	CDS	Amet_4620	NC_009633.1	4735064	4735714	R	TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: chy:CHY_2045 phosphate transport system regulatory protein PhoU; phosphate uptake regulator PhoU	complement(4735064..4735714)	Alkaliphilus metalliredigens QYMF	5314783
YP_001322351.1	CDS	Amet_4621	NC_009633.1	4735732	4736484	R	TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: chy:CHY_2116 phosphate ABC transporter, ATP-binding protein PstB; phosphate ABC transporter ATPase	complement(4735732..4736484)	Alkaliphilus metalliredigens QYMF	5314784
YP_001322352.1	CDS	Amet_4622	NC_009633.1	4736517	4737362	R	TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sfu:Sfum_0703 phosphate ABC transporter, inner membrane subunit PstA; phosphate ABC transporter permease	complement(4736517..4737362)	Alkaliphilus metalliredigens QYMF	5314785
YP_001322353.1	CDS	Amet_4623	NC_009633.1	4737363	4738295	R	TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mba:Mbar_A1779 phosphate ABC transporter, permease protein; phosphate ABC transporter permease	complement(4737363..4738295)	Alkaliphilus metalliredigens QYMF	5314786
YP_001322354.1	CDS	Amet_4624	NC_009633.1	4738530	4739441	R	TIGRFAM: phosphate binding protein; KEGG: mma:MM2005 phosphate-binding protein; phosphate binding protein	complement(4738530..4739441)	Alkaliphilus metalliredigens QYMF	5314787
YP_001322355.1	CDS	Amet_4625	NC_009633.1	4739736	4740407	D	PFAM: beta-lactamase domain protein; KEGG: tma:TM1162 conserved hypothetical protein; beta-lactamase domain-containing protein	4739736..4740407	Alkaliphilus metalliredigens QYMF	5314788
YP_001322356.1	CDS	Amet_4626	NC_009633.1	4740608	4741459	D	PFAM: protein of unknown function DUF6, transmembrane; KEGG: ctc:CTC00807 membrane protein, putative transporter; hypothetical protein	4740608..4741459	Alkaliphilus metalliredigens QYMF	5314789
YP_001322357.1	CDS	Amet_4627	NC_009633.1	4741803	4742861	R	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bha:BH0512 iron transport system ATP-binding protein; ABC transporter-like protein	complement(4741803..4742861)	Alkaliphilus metalliredigens QYMF	5314790
YP_001322358.1	CDS	Amet_4628	NC_009633.1	4742874	4744550	R	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH0514 iron(III) transport system permease protein; binding-protein-dependent transport system inner membrane protein	complement(4742874..4744550)	Alkaliphilus metalliredigens QYMF	5314791
YP_001322359.1	CDS	Amet_4629	NC_009633.1	4744609	4745688	R	PFAM: extracellular solute-binding protein, family 1; KEGG: bha:BH0513 iron(III) transport system substrate-binding protein; extracellular solute-binding protein	complement(4744609..4745688)	Alkaliphilus metalliredigens QYMF	5314792
YP_001322360.1	CDS	Amet_4630	NC_009633.1	4746120	4747298	R	TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: ctc:CTC00312 acetyl-CoA acetyltransferase; acetyl-CoA acetyltransferase	complement(4746120..4747298)	Alkaliphilus metalliredigens QYMF	5314793
YP_001322361.1	CDS	Amet_4631	NC_009633.1	4747338	4748078	R	TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: bha:BH3896 3-oxoacyl-(acyl-carrier protein) reductase; 3-oxoacyl-(acyl-carrier-protein) reductase	complement(4747338..4748078)	Alkaliphilus metalliredigens QYMF	5314794
YP_001322362.1	CDS	Amet_4632	NC_009633.1	4748469	4749656	R	PFAM: protein of unknown function UPF0118; KEGG: cno:NT01CX_1730 permease; hypothetical protein	complement(4748469..4749656)	Alkaliphilus metalliredigens QYMF	5314795
YP_001322363.1	CDS	Amet_4633	NC_009633.1	4749804	4750517	R	PFAM: protein of unknown function DUF421; KEGG: bld:BLi00270 hypothetical protein; hypothetical protein	complement(4749804..4750517)	Alkaliphilus metalliredigens QYMF	5314796
YP_001322364.1	CDS	Amet_4634	NC_009633.1	4750627	4751367	R	TIGRFAM: tRNA pseudouridine synthase A; PFAM: tRNA pseudouridine synthase; KEGG: ctc:CTC01851 tRNA pseudouridine synthase A; tRNA pseudouridine synthase A	complement(4750627..4751367)	Alkaliphilus metalliredigens QYMF	5314797
YP_001322365.1	CDS	Amet_4635	NC_009633.1	4751421	4752746	R	KEGG: sus:Acid_1308 hypothetical protein; hypothetical protein	complement(4751421..4752746)	Alkaliphilus metalliredigens QYMF	5314798
YP_001322366.1	CDS	Amet_4636	NC_009633.1	4752712	4754052	R	PFAM: glutamate--cysteine ligase, GCS2; KEGG: zmo:ZMO1556 gamma-glutamylcysteine synthetase; glutamate--cysteine ligase	complement(4752712..4754052)	Alkaliphilus metalliredigens QYMF	5314799
YP_001322367.1	CDS	Amet_4637	NC_009633.1	4754317	4755639	R	hypothetical protein	complement(4754317..4755639)	Alkaliphilus metalliredigens QYMF	5314800
YP_001322368.1	CDS	Amet_4638	NC_009633.1	4755922	4757907	D	PFAM: histidine kinase, HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: dsy:DSY4038 hypothetical protein; methyl-accepting chemotaxis sensory transducer	4755922..4757907	Alkaliphilus metalliredigens QYMF	5314801
YP_001322369.1	CDS	Amet_4639	NC_009633.1	4758013	4758846	R	PFAM: nitroreductase; KEGG: dsy:DSY1470 hypothetical protein; nitroreductase	complement(4758013..4758846)	Alkaliphilus metalliredigens QYMF	5314802
YP_001322370.1	CDS	Amet_4640	NC_009633.1	4759248	4760252	R	KEGG: tko:TK0873 hypothetical protein; hypothetical protein	complement(4759248..4760252)	Alkaliphilus metalliredigens QYMF	5314803
YP_001322371.1	CDS	Amet_4641	NC_009633.1	4760264	4760881	R	KEGG: tko:TK0874 predicted metallophosphoesterase, calcineurin superfamily; calcineurin superfamily metallophosphoesterase	complement(4760264..4760881)	Alkaliphilus metalliredigens QYMF	5314804
YP_001322372.1	CDS	Amet_4642	NC_009633.1	4760988	4761212	R	PFAM: thiamineS protein; KEGG: chy:CHY_0791 molybdopterin converting factor, subunit 1; sulfur transfer protein ThiS	complement(4760988..4761212)	Alkaliphilus metalliredigens QYMF	5314805
YP_001322373.1	CDS	Amet_4643	NC_009633.1	4761294	4763105	R	PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase-like; KEGG: chy:CHY_0789 aldehyde ferredoxin oxidoreductase, tungsten-containing; aldehyde ferredoxin oxidoreductase	complement(4761294..4763105)	Alkaliphilus metalliredigens QYMF	5314806
YP_001322374.1	CDS	Amet_4644	NC_009633.1	4763284	4765221	R	TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; GAF domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: cno:NT01CX_0469 signal-transduction and transcriptional-control protein; sigma-54 dependent trancsriptional regulator	complement(4763284..4765221)	Alkaliphilus metalliredigens QYMF	5314807
YP_001322375.1	CDS	Amet_4645	NC_009633.1	4765353	4766780	R	PFAM: peptidase M28; KEGG: ctc:pE88_21 putative aminopeptidase; peptidase M28	complement(4765353..4766780)	Alkaliphilus metalliredigens QYMF	5314808
YP_001322376.1	CDS	Amet_4646	NC_009633.1	4767040	4769004	D	PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: cpf:CPF_1799 molybdopterin oxidoreductase; nitrate reductase	4767040..4769004	Alkaliphilus metalliredigens QYMF	5314809
YP_001322377.1	CDS	Amet_4648	NC_009633.1	4769710	4771692	R	TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase, central region; KEGG: ctc:CTC01332 transketolase; transketolase	complement(4769710..4771692)	Alkaliphilus metalliredigens QYMF	5314811
YP_001322378.1	CDS	Amet_4649	NC_009633.1	4771920	4772408	R	PFAM: dUTPase; KEGG: bha:BH3133 hypothetical protein; dUTPase	complement(4771920..4772408)	Alkaliphilus metalliredigens QYMF	5314812
YP_001322379.1	CDS	Amet_4650	NC_009633.1	4772749	4773249	R	PFAM: SEC-C motif domain protein; KEGG: ctc:CTC00166 hypothetical protein; hypothetical protein	complement(4772749..4773249)	Alkaliphilus metalliredigens QYMF	5314813
YP_001322380.1	CDS	Amet_4651	NC_009633.1	4773371	4774762	R	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: pfu:PF1850 hypothetical damage-inducible DinF protein; MATE efflux family protein	complement(4773371..4774762)	Alkaliphilus metalliredigens QYMF	5314814
YP_001322381.1	CDS	Amet_4652	NC_009633.1	4775122	4775757	D	TIGRFAM: putative proton-coupled thiamine transporter YuaJ; KEGG: tte:TTE2512 hypothetical protein; putative proton-coupled thiamine transporter YuaJ	4775122..4775757	Alkaliphilus metalliredigens QYMF	5314815
YP_001322382.1	CDS	Amet_4653	NC_009633.1	4775907	4776281	D	PFAM: Desulfoferrodoxin, ferrous iron-binding region; KEGG: tte:TTE2229 putative superoxide reductase; desulfoferrodoxin, ferrous iron-binding region	4775907..4776281	Alkaliphilus metalliredigens QYMF	5314816
YP_001322383.1	CDS	Amet_4654	NC_009633.1	4776327	4776557	R	hypothetical protein	complement(4776327..4776557)	Alkaliphilus metalliredigens QYMF	5314817
YP_001322384.1	CDS	Amet_4655	NC_009633.1	4776614	4778053	R	PFAM: phospholipase D/Transphosphatidylase; KEGG: bcz:BCZK1088 cardiolipin synthetase; phospholipase D/transphosphatidylase	complement(4776614..4778053)	Alkaliphilus metalliredigens QYMF	5314818
YP_001322385.1	CDS	Amet_4656	NC_009633.1	4778120	4779340	R	PFAM: Patatin; KEGG: tte:TTE1792 hypothetical protein; patatin	complement(4778120..4779340)	Alkaliphilus metalliredigens QYMF	5314819
YP_001322386.1	CDS	Amet_4657	NC_009633.1	4779716	4783231	R	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: tte:TTE0445 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein	complement(4779716..4783231)	Alkaliphilus metalliredigens QYMF	5314820
YP_001322387.1	CDS	Amet_4658	NC_009633.1	4783655	4785388	R	PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: cno:NT01CX_0640 ABC transporter; ABC transporter transmembrane region	complement(4783655..4785388)	Alkaliphilus metalliredigens QYMF	5314821
YP_001322388.1	CDS	Amet_4659	NC_009633.1	4785645	4786463	R	KEGG: bha:BH1562 hypothetical protein; hypothetical protein	complement(4785645..4786463)	Alkaliphilus metalliredigens QYMF	5314822
YP_001322389.1	CDS	Amet_4660	NC_009633.1	4786673	4787698	R	catalyzes the formation of asparagine from aspartate and ammonia; asparagine synthetase AsnA	complement(4786673..4787698)	Alkaliphilus metalliredigens QYMF	5314823
YP_001322390.1	CDS	Amet_4661	NC_009633.1	4788172	4788585	R	TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; KEGG: ctc:CTC02359 hemerythrin-like domain protein DcrH; hemerythrin-like metal-binding protein	complement(4788172..4788585)	Alkaliphilus metalliredigens QYMF	5314824
YP_001322391.1	CDS	Amet_4662	NC_009633.1	4789360	4789539	D	hypothetical protein	4789360..4789539	Alkaliphilus metalliredigens QYMF	5314825
YP_001322392.1	CDS	Amet_4663	NC_009633.1	4789695	4791239	D	PFAM: Rieske [2Fe-2S] domain protein; FAD dependent oxidoreductase; KEGG: cth:Cthe_1461 FAD dependent oxidoreductase; FAD dependent oxidoreductase	4789695..4791239	Alkaliphilus metalliredigens QYMF	5314826
YP_001322393.1	CDS	Amet_4664	NC_009633.1	4791459	4791941	R	PFAM: protein of unknown function DUF458; KEGG: cac:CAC0166 hypothetical protein; hypothetical protein	complement(4791459..4791941)	Alkaliphilus metalliredigens QYMF	5314827
YP_001322394.1	CDS	Amet_4665	NC_009633.1	4792297	4793640	R	PFAM: protein of unknown function DUF1063; KEGG: ctc:CTC02309 hypothetical protein; hypothetical protein	complement(4792297..4793640)	Alkaliphilus metalliredigens QYMF	5314828
YP_001322395.1	CDS	Amet_4666	NC_009633.1	4793791	4795572	R	PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; PAS fold domain protein; SMART: PAS domain containing protein; AAA ATPase; KEGG: tte:TTE0268 NtrC family transcriptional regulator, ATPase domain; sigma-54 dependent trancsriptional regulator	complement(4793791..4795572)	Alkaliphilus metalliredigens QYMF	5314829
YP_001322396.1	CDS	Amet_4667	NC_009633.1	4795762	4796838	R	PFAM: 2-nitropropane dioxygenase, NPD; KEGG: cac:CAC3580 dioxygenase related to 2-nitropropane dioxygenase; 2-nitropropane dioxygenase	complement(4795762..4796838)	Alkaliphilus metalliredigens QYMF	5314830
YP_001322397.1	CDS	Amet_4668	NC_009633.1	4797056	4798051	R	PFAM: ABC-2 type transporter; KEGG: dar:Daro_0987 ABC-2:ABC transporter related; ABC transporter	complement(4797056..4798051)	Alkaliphilus metalliredigens QYMF	5314831
YP_001322398.1	CDS	Amet_4669	NC_009633.1	4798065	4799108	R	KEGG: deh:cbdb_A134 ABC transporter, permease protein; hypothetical protein	complement(4798065..4799108)	Alkaliphilus metalliredigens QYMF	5314832
YP_001322399.1	CDS	Amet_4670	NC_009633.1	4799110	4799964	R	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: msm:MSMEG_1502 ABC transporter, ATP-binding protein; ABC transporter-like protein	complement(4799110..4799964)	Alkaliphilus metalliredigens QYMF	5314833
YP_001322400.1	CDS	Amet_4671	NC_009633.1	4800037	4800666	R	PFAM: regulatory protein, TetR; KEGG: dsy:DSY4804 hypothetical protein; TetR family transcriptional regulator	complement(4800037..4800666)	Alkaliphilus metalliredigens QYMF	5314834
YP_001322401.1	CDS	Amet_4672	NC_009633.1	4800933	4802747	R	PFAM: DNA mismatch repair protein MutS domain protein; KEGG: dsy:DSY2437 hypothetical protein; DNA mismatch repair protein MutS domain-containing protein	complement(4800933..4802747)	Alkaliphilus metalliredigens QYMF	5314835
YP_001322402.1	CDS	Amet_4675	NC_009633.1	4803859	4804539	D	PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: cpr:CPR_0208 transcriptional regulator, AraC family; helix-turn-helix domain-containing protein	4803859..4804539	Alkaliphilus metalliredigens QYMF	5314838
YP_001322403.1	CDS	Amet_4676	NC_009633.1	4805679	4806068	R	hypothetical protein	complement(4805679..4806068)	Alkaliphilus metalliredigens QYMF	5314839
YP_001322404.1	CDS	Amet_4677	NC_009633.1	4806151	4807011	R	KEGG: mbu:Mbur_1109 hypothetical protein; hypothetical protein	complement(4806151..4807011)	Alkaliphilus metalliredigens QYMF	5314840
YP_001322405.1	CDS	Amet_4678	NC_009633.1	4807333	4807452	D	hypothetical protein	4807333..4807452	Alkaliphilus metalliredigens QYMF	5314841
YP_001322406.1	CDS	Amet_4679	NC_009633.1	4807499	4807879	D	hypothetical protein	4807499..4807879	Alkaliphilus metalliredigens QYMF	5314842
YP_001322407.1	CDS	Amet_4680	NC_009633.1	4808305	4808643	R	hypothetical protein	complement(4808305..4808643)	Alkaliphilus metalliredigens QYMF	5314843
YP_001322408.1	CDS	Amet_4681	NC_009633.1	4808905	4809447	D	hypothetical protein	4808905..4809447	Alkaliphilus metalliredigens QYMF	5314844
YP_001322409.1	CDS	Amet_4682	NC_009633.1	4809476	4810198	R	hypothetical protein	complement(4809476..4810198)	Alkaliphilus metalliredigens QYMF	5314845
YP_001322410.1	CDS	Amet_4683	NC_009633.1	4810185	4810751	R	TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: rfr:Rfer_4146 sigma-24 (FecI-like); ECF subfamily RNA polymerase sigma-24 factor	complement(4810185..4810751)	Alkaliphilus metalliredigens QYMF	5314846
YP_001322411.1	CDS	Amet_4684	NC_009633.1	4810893	4812446	D	PFAM: Integrase, catalytic region; KEGG: bha:BH3965 transposase (22); integrase catalytic subunit	4810893..4812446	Alkaliphilus metalliredigens QYMF	5314847
YP_001322412.1	CDS	Amet_4685	NC_009633.1	4812434	4813177	D	PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: dsy:DSY0836 hypothetical protein; IstB ATP binding domain-containing protein	4812434..4813177	Alkaliphilus metalliredigens QYMF	5314848
YP_001322413.1	CDS	Amet_4686	NC_009633.1	4813181	4813390	D	hypothetical protein	4813181..4813390	Alkaliphilus metalliredigens QYMF	5314849
YP_001322414.1	CDS	Amet_4687	NC_009633.1	4813776	4814594	R	PFAM: copper amine oxidase domain protein; KEGG: cth:Cthe_1827 copper amine oxidase-like protein; copper amine oxidase domain-containing protein	complement(4813776..4814594)	Alkaliphilus metalliredigens QYMF	5314850
YP_001322415.1	CDS	Amet_4688	NC_009633.1	4814681	4815112	R	hypothetical protein	complement(4814681..4815112)	Alkaliphilus metalliredigens QYMF	5314851
YP_001322416.1	CDS	Amet_4689	NC_009633.1	4815113	4815607	R	hypothetical protein	complement(4815113..4815607)	Alkaliphilus metalliredigens QYMF	5314852
YP_001322417.1	CDS	Amet_4690	NC_009633.1	4816306	4816959	R	hypothetical protein	complement(4816306..4816959)	Alkaliphilus metalliredigens QYMF	5314853
YP_001322418.1	CDS	Amet_4691	NC_009633.1	4817327	4817836	D	hypothetical protein	4817327..4817836	Alkaliphilus metalliredigens QYMF	5314854
YP_001322419.1	CDS	Amet_4692	NC_009633.1	4817865	4818587	R	hypothetical protein	complement(4817865..4818587)	Alkaliphilus metalliredigens QYMF	5314855
YP_001322420.1	CDS	Amet_4693	NC_009633.1	4818574	4819140	R	TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: btk:BT9727_4602 possible RNA polymerase sigma factor, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor	complement(4818574..4819140)	Alkaliphilus metalliredigens QYMF	5314856
YP_001322421.1	CDS	Amet_4694	NC_009633.1	4820133	4820759	R	hypothetical protein	complement(4820133..4820759)	Alkaliphilus metalliredigens QYMF	5314857
YP_001322422.1	CDS	Amet_4695	NC_009633.1	4820955	4823135	R	TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: ctc:CTC02090 ATP-dependent DNA helicase recQ; ATP-dependent DNA helicase RecQ	complement(4820955..4823135)	Alkaliphilus metalliredigens QYMF	5314858
YP_001322423.1	CDS	Amet_4696	NC_009633.1	4823289	4823672	R	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cpr:CPR_0440 lactoylglutathione lyase; glyoxalase/bleomycin resistance protein/dioxygenase	complement(4823289..4823672)	Alkaliphilus metalliredigens QYMF	5314859
YP_001322424.1	CDS	Amet_4697	NC_009633.1	4824262	4824477	D	hypothetical protein	4824262..4824477	Alkaliphilus metalliredigens QYMF	5314860
YP_001322425.1	CDS	Amet_4698	NC_009633.1	4824557	4825264	R	PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: ctc:CTC00155 tRNA pseudouridine synthase A; RNA-binding S4 domain-containing protein	complement(4824557..4825264)	Alkaliphilus metalliredigens QYMF	5314861
YP_001322426.1	CDS	Amet_4699	NC_009633.1	4825285	4826448	R	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: bsu:BG12963 similar to RNA helicase; DEAD/DEAH box helicase	complement(4825285..4826448)	Alkaliphilus metalliredigens QYMF	5314862
YP_001322427.1	CDS	Amet_4700	NC_009633.1	4826546	4826734	R	hypothetical protein	complement(4826546..4826734)	Alkaliphilus metalliredigens QYMF	5314863
YP_001322428.1	CDS	Amet_4701	NC_009633.1	4826814	4826972	R	hypothetical protein	complement(4826814..4826972)	Alkaliphilus metalliredigens QYMF	5314864
YP_001322429.1	CDS	Amet_4702	NC_009633.1	4826980	4827909	R	KEGG: tko:TK0479 hypothetical protein; hypothetical protein	complement(4826980..4827909)	Alkaliphilus metalliredigens QYMF	5314865
YP_001322430.1	CDS	Amet_4703	NC_009633.1	4828533	4829519	D	TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: afu:AF0635 immunogenic protein; TRAP transporter solute receptor TAXI family protein	4828533..4829519	Alkaliphilus metalliredigens QYMF	5314866
YP_001322431.1	CDS	Amet_4704	NC_009633.1	4829503	4830042	D	PFAM: Domain of unknown function DUF1850; KEGG: sfu:Sfum_3722 hypothetical protein; hypothetical protein	4829503..4830042	Alkaliphilus metalliredigens QYMF	5314867
YP_001322432.1	CDS	Amet_4705	NC_009633.1	4830045	4832024	D	TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: bha:BH2945 hypothetical protein; TRAP transporter, 4TM/12TM fusion protein	4830045..4832024	Alkaliphilus metalliredigens QYMF	5314868
YP_001322433.1	CDS	Amet_4706	NC_009633.1	4832182	4832868	R	SMART: Rhodanese domain protein; rhodanese domain-containing protein	complement(4832182..4832868)	Alkaliphilus metalliredigens QYMF	5314869
YP_001322434.1	CDS	Amet_4707	NC_009633.1	4832896	4833627	R	hypothetical protein	complement(4832896..4833627)	Alkaliphilus metalliredigens QYMF	5314870
YP_001322435.1	CDS	Amet_4708	NC_009633.1	4833996	4834886	D	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: cno:NT01CX_0310 transcriptional regulators, LysR family; LysR family transcriptional regulator	4833996..4834886	Alkaliphilus metalliredigens QYMF	5314871
YP_001322436.1	CDS	Amet_4709	NC_009633.1	4834992	4835510	R	PFAM: protein of unknown function DUF395, YeeE/YedE; KEGG: ctc:CTC01176 membrane spanning protein; hypothetical protein	complement(4834992..4835510)	Alkaliphilus metalliredigens QYMF	5314872
YP_001322437.1	CDS	Amet_4710	NC_009633.1	4835534	4835761	R	PFAM: SirA family protein; KEGG: cno:NT01CX_0312 uncharacterized protein family UPF0033 superfamily; SirA family protein	complement(4835534..4835761)	Alkaliphilus metalliredigens QYMF	5314873
YP_001322438.1	CDS	Amet_4711	NC_009633.1	4835772	4836470	R	PFAM: protein of unknown function DUF395, YeeE/YedE; KEGG: cno:NT01CX_0313 putative transporter; hypothetical protein	complement(4835772..4836470)	Alkaliphilus metalliredigens QYMF	5314874
YP_001322439.1	CDS	Amet_4712	NC_009633.1	4836688	4836864	R	KEGG: ctc:CTC00153 transcriptional regulatory protein; hypothetical protein	complement(4836688..4836864)	Alkaliphilus metalliredigens QYMF	5314875
YP_001322440.1	CDS	Amet_4713	NC_009633.1	4836982	4838172	D	KEGG: ctc:CTC00154 hypothetical protein; hypothetical protein	4836982..4838172	Alkaliphilus metalliredigens QYMF	5314876
YP_001322441.1	CDS	Amet_4714	NC_009633.1	4838295	4839218	R	PFAM: protein of unknown function DUF6, transmembrane; KEGG: bch:Bcen2424_2564 protein of unknown function DUF6, transmembrane; hypothetical protein	complement(4838295..4839218)	Alkaliphilus metalliredigens QYMF	5314877
YP_001322442.1	CDS	Amet_4715	NC_009633.1	4839232	4839642	R	KEGG: tte:TTE2425 hypothetical protein; hypothetical protein	complement(4839232..4839642)	Alkaliphilus metalliredigens QYMF	5314878
YP_001322443.1	CDS	Amet_4716	NC_009633.1	4840225	4840440	D	hypothetical protein	4840225..4840440	Alkaliphilus metalliredigens QYMF	5314879
YP_001322444.1	CDS	Amet_4717	NC_009633.1	4840487	4842487	R	PFAM: histidine kinase, HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: ctc:CTC01857 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer	complement(4840487..4842487)	Alkaliphilus metalliredigens QYMF	5314880
YP_001322445.1	CDS	Amet_4718	NC_009633.1	4843019	4843774	R	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bha:BH2078 nickel transport system ATP-binding protein; ABC transporter-like protein	complement(4843019..4843774)	Alkaliphilus metalliredigens QYMF	5314881
YP_001322446.1	CDS	Amet_4719	NC_009633.1	4843749	4844594	R	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bha:BH2077 nickel transport system ATP-binding protein; ABC transporter-like protein	complement(4843749..4844594)	Alkaliphilus metalliredigens QYMF	5314882
YP_001322447.1	CDS	Amet_4720	NC_009633.1	4844557	4845435	R	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: wsu:WS0986 oligopeptide ABC transporter permease; binding-protein-dependent transport system inner membrane protein	complement(4844557..4845435)	Alkaliphilus metalliredigens QYMF	5314883
YP_001322448.1	CDS	Amet_4721	NC_009633.1	4845437	4846366	R	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: wsu:WS0985 nickel transport system permease; binding-protein-dependent transport system inner membrane protein	complement(4845437..4846366)	Alkaliphilus metalliredigens QYMF	5314884
YP_001322449.1	CDS	Amet_4722	NC_009633.1	4846450	4848051	R	TIGRFAM: nickel ABC transporter, periplasmic nickel-binding protein; PFAM: extracellular solute-binding protein, family 5; KEGG: wsu:WS0982 putative nikA protein; nickel ABC transporter periplasmic nickel-binding protein	complement(4846450..4848051)	Alkaliphilus metalliredigens QYMF	5314885
YP_001322450.1	CDS	Amet_4723	NC_009633.1	4848683	4849858	D	PFAM: major facilitator superfamily MFS_1; KEGG: dsy:DSY3748 hypothetical protein; major facilitator superfamily transporter	4848683..4849858	Alkaliphilus metalliredigens QYMF	5314886
YP_001322451.1	CDS	Amet_4724	NC_009633.1	4850071	4851000	R	PFAM: phosphoesterase, PA-phosphatase related; KEGG: sus:Acid_5127 phosphoesterase, PA-phosphatase related; PA-phosphatase-like phosphoesterase	complement(4850071..4851000)	Alkaliphilus metalliredigens QYMF	5314887
YP_001322452.1	CDS	Amet_4725	NC_009633.1	4851096	4851962	R	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bha:BH3305 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase	complement(4851096..4851962)	Alkaliphilus metalliredigens QYMF	5314888
YP_001322453.1	CDS	Amet_4726	NC_009633.1	4852038	4852484	R	PFAM: GCN5-related N-acetyltransferase; KEGG: dsy:DSY0298 hypothetical protein; N-acetyltransferase GCN5	complement(4852038..4852484)	Alkaliphilus metalliredigens QYMF	5314889
YP_001322454.1	CDS	Amet_4727	NC_009633.1	4852626	4854029	R	PFAM: regulatory protein GntR, HTH; aminotransferase, class I and II; KEGG: btl:BALH_2995 transcriptional regulator, GntR family; GntR family transcriptional regulator	complement(4852626..4854029)	Alkaliphilus metalliredigens QYMF	5314890
YP_001322455.1	CDS	Amet_4728	NC_009633.1	4854146	4855087	D	PFAM: protein of unknown function DUF6, transmembrane; KEGG: bha:BH0390 hypothetical protein; hypothetical protein	4854146..4855087	Alkaliphilus metalliredigens QYMF	5314891
YP_001322456.1	CDS	Amet_4729	NC_009633.1	4855295	4855951	D	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cac:CAC1506 response regulator (CheY-like receiver domain and a HTH); two component transcriptional regulator	4855295..4855951	Alkaliphilus metalliredigens QYMF	5314892
YP_001322457.1	CDS	Amet_4730	NC_009633.1	4855948	4857393	D	PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; KEGG: cac:CAC1507 sensory transduction histidine kinase (with HAMP domain); integral membrane sensor signal transduction histidine kinase	4855948..4857393	Alkaliphilus metalliredigens QYMF	5314893
YP_001322458.1	CDS	Amet_4731	NC_009633.1	4857441	4858313	D	hypothetical protein	4857441..4858313	Alkaliphilus metalliredigens QYMF	5314894
YP_001322459.1	CDS	Amet_4732	NC_009633.1	4858600	4858890	D	PFAM: transposase IS3/IS911 family protein; KEGG: bha:BH3445 transposase (05); transposase IS3/IS911 family protein	4858600..4858890	Alkaliphilus metalliredigens QYMF	5314895
YP_001322460.1	CDS	Amet_4735	NC_009633.1	4860463	4861755	R	PFAM: peptidase M56, BlaR1; KEGG: swo:Swol_0431 antirepressor regulating drug resistance predicted signal transduction N-terminal membrane component-like protein; peptidase M56, BlaR1	complement(4860463..4861755)	Alkaliphilus metalliredigens QYMF	5314898
YP_001322461.1	CDS	Amet_4736	NC_009633.1	4861766	4862125	R	PFAM: Penicillinase repressor; KEGG: swo:Swol_0429 transcriptional repressor, CopY family; CopY family transcriptional regulator	complement(4861766..4862125)	Alkaliphilus metalliredigens QYMF	5314899
YP_001322462.1	CDS	Amet_4737	NC_009633.1	4862248	4862847	R	hypothetical protein	complement(4862248..4862847)	Alkaliphilus metalliredigens QYMF	5314900
YP_001322463.1	CDS	Amet_4738	NC_009633.1	4863165	4864277	R	PFAM: ABC transporter related; TOBE domain protein; transport-associated protein OB domain protein; SMART: AAA ATPase; KEGG: cth:Cthe_1862 ABC transporter related protein; ABC transporter-like protein	complement(4863165..4864277)	Alkaliphilus metalliredigens QYMF	5314901
YP_001322464.1	CDS	Amet_4739	NC_009633.1	4864405	4866765	R	PFAM: extracellular solute-binding protein, family 1; KEGG: dsy:DSY1083 hypothetical protein; extracellular solute-binding protein	complement(4864405..4866765)	Alkaliphilus metalliredigens QYMF	5314902
YP_001322465.1	CDS	Amet_4740	NC_009633.1	4866755	4868227	R	KEGG: dsy:DSY1081 hypothetical protein; hypothetical protein	complement(4866755..4868227)	Alkaliphilus metalliredigens QYMF	5314903
YP_001322466.1	CDS	Amet_4741	NC_009633.1	4868242	4869588	R	TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: dsy:DSY1080 hypothetical protein; RND family efflux transporter MFP subunit	complement(4868242..4869588)	Alkaliphilus metalliredigens QYMF	5314904
YP_001322467.1	CDS	Amet_4742	NC_009633.1	4869657	4870553	R	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dsy:DSY1079 hypothetical protein; binding-protein-dependent transport system inner membrane protein	complement(4869657..4870553)	Alkaliphilus metalliredigens QYMF	5314905
YP_001322468.1	CDS	Amet_4743	NC_009633.1	4870561	4871442	R	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dsy:DSY1078 hypothetical protein; binding-protein-dependent transport system inner membrane protein	complement(4870561..4871442)	Alkaliphilus metalliredigens QYMF	5314906
YP_001322469.1	CDS	Amet_4744	NC_009633.1	4871676	4872341	R	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bad:BAD_0931 ABC transporter domain protein; ABC transporter-like protein	complement(4871676..4872341)	Alkaliphilus metalliredigens QYMF	5314907
YP_001322470.1	CDS	Amet_4745	NC_009633.1	4872355	4873767	R	PFAM: protein of unknown function DUF214; KEGG: smu:SMU.1093 putative ABC transporter, permease protein; hypothetical protein	complement(4872355..4873767)	Alkaliphilus metalliredigens QYMF	5314908
YP_001322471.1	CDS	Amet_4746	NC_009633.1	4874034	4875182	R	PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; KEGG: tte:TTE1017 sensory transduction histidine kinase; integral membrane sensor signal transduction histidine kinase	complement(4874034..4875182)	Alkaliphilus metalliredigens QYMF	5314909
YP_001322472.1	CDS	Amet_4747	NC_009633.1	4875179	4875856	R	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ctc:CTC01482 transcriptional activator protein; two component transcriptional regulator	complement(4875179..4875856)	Alkaliphilus metalliredigens QYMF	5314910
YP_001322473.1	CDS	Amet_4748	NC_009633.1	4875885	4876058	R	Contains selenocysteine; hypothetical protein	complement(4875885..4876058)	Alkaliphilus metalliredigens QYMF	5314911
YP_001322474.1	CDS	Amet_4749	NC_009633.1	4876287	4876766	R	SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase	complement(4876287..4876766)	Alkaliphilus metalliredigens QYMF	5314912
YP_001322475.1	CDS	Amet_4750	NC_009633.1	4876811	4876978	R	KEGG: tte:TTE2682 hypothetical protein; hypothetical protein	complement(4876811..4876978)	Alkaliphilus metalliredigens QYMF	5314913
YP_001322476.1	CDS	Amet_4751	NC_009633.1	4877237	4878448	R	PFAM: peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: tte:TTE2683 trypsin-like serine protease, typically periplasmic, contain C-terminal PDZ domain; 2-alkenal reductase	complement(4877237..4878448)	Alkaliphilus metalliredigens QYMF	5314914
YP_001322477.1	CDS	Amet_4752	NC_009633.1	4878486	4879280	R	PFAM: beta-lactamase domain protein; KEGG: cth:Cthe_2327 beta-lactamase-like protein; beta-lactamase domain-containing protein	complement(4878486..4879280)	Alkaliphilus metalliredigens QYMF	5314915
YP_001322478.1	CDS	Amet_4753	NC_009633.1	4879296	4880552	R	TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); KEGG: cno:NT01CX_0948 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; UDP-N-acetylglucosamine 1-carboxyvinyltransferase	complement(4879296..4880552)	Alkaliphilus metalliredigens QYMF	5314916
YP_001322479.1	CDS	Amet_4754	NC_009633.1	4880899	4881786	R	KEGG: tte:TTE2685 hypothetical protein; hypothetical protein	complement(4880899..4881786)	Alkaliphilus metalliredigens QYMF	5314917
YP_001322480.1	CDS	Amet_4755	NC_009633.1	4881930	4883393	R	KEGG: sep:SE0020 hypothetical protein; hypothetical protein	complement(4881930..4883393)	Alkaliphilus metalliredigens QYMF	5314918
YP_001322481.1	CDS	Amet_4756	NC_009633.1	4883414	4883935	R	hypothetical protein	complement(4883414..4883935)	Alkaliphilus metalliredigens QYMF	5314919
YP_001322482.1	CDS	Amet_4757	NC_009633.1	4884022	4885821	R	KEGG: tte:TTE2688 sensory transduction histidine kinases; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase	complement(4884022..4885821)	Alkaliphilus metalliredigens QYMF	5314920
YP_001322483.1	CDS	Amet_4758	NC_009633.1	4885824	4886513	R	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cth:Cthe_2333 two component transcriptional regulator, winged helix family; two component transcriptional regulator	complement(4885824..4886513)	Alkaliphilus metalliredigens QYMF	5314921
YP_001322484.1	CDS	Amet_4759	NC_009633.1	4886624	4887436	R	KEGG: tte:TTE2690 hypothetical protein; hypothetical protein	complement(4886624..4887436)	Alkaliphilus metalliredigens QYMF	5314922
YP_001322485.1	CDS	Amet_4760	NC_009633.1	4887622	4888914	D	PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: oih:OB2375 intracellular alkaline serine proteinase; peptidase S8/S53 subtilisin kexin sedolisin	4887622..4888914	Alkaliphilus metalliredigens QYMF	5314923
YP_001322486.1	CDS	Amet_4761	NC_009633.1	4889038	4890483	R	PFAM: Peptidoglycan-binding LysM; peptidase M23B; G5 domain protein; KEGG: tte:TTE2691 membrane proteins related to metalloendopeptidase; peptidase M23B	complement(4889038..4890483)	Alkaliphilus metalliredigens QYMF	5314924
YP_001322487.1	CDS	Amet_4762	NC_009633.1	4890707	4892215	R	PFAM: Peptidase M1, membrane alanine aminopeptidase-like; KEGG: tte:TTE2694 aminopeptidase N; peptidase M1, membrane alanine aminopeptidase-like protein	complement(4890707..4892215)	Alkaliphilus metalliredigens QYMF	5314925
YP_001322488.1	CDS	Amet_4763	NC_009633.1	4892453	4893526	D	TIGRFAM: primosome, DnaD subunit; PFAM: DnaD and phage-associated region; KEGG: ctc:CTC00124 DNA replication protein DnaD; primosome subunit DnaD	4892453..4893526	Alkaliphilus metalliredigens QYMF	5314926
YP_001322489.1	CDS	Amet_4764	NC_009633.1	4893540	4894517	D	acts to load the DnaB helicase onto the initiation site during DNA replication; DNA replication protein DnaC	4893540..4894517	Alkaliphilus metalliredigens QYMF	5314927
YP_001322490.1	CDS	Amet_4765	NC_009633.1	4894982	4896265	R	catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase	complement(4894982..4896265)	Alkaliphilus metalliredigens QYMF	5314930
YP_001322491.1	CDS	Amet_4766	NC_009633.1	4896500	4896706	R	Contains selenocysteine; KEGG: cth:Cthe_3092 conserved hypothetical protein, CF-27 family; hypothetical protein	complement(4896500..4896706)	Alkaliphilus metalliredigens QYMF	5314931
YP_001322492.1	CDS	Amet_4767	NC_009633.1	4896923	4897522	R	PFAM: GCN5-related N-acetyltransferase; KEGG: tma:TM0968 hypothetical protein; N-acetyltransferase GCN5	complement(4896923..4897522)	Alkaliphilus metalliredigens QYMF	5314932
YP_001322493.1	CDS	Amet_4768	NC_009633.1	4897577	4898920	R	TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase, N-terminal domain protein; DnaB domain protein helicase, C-terminal domain protein; KEGG: cth:Cthe_2256 replicative DNA helicase; replicative DNA helicase	complement(4897577..4898920)	Alkaliphilus metalliredigens QYMF	5314933
YP_001322494.1	CDS	rplI	NC_009633.1	4899100	4899549	R	in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9	complement(4899100..4899549)	Alkaliphilus metalliredigens QYMF	5314934
YP_001322495.1	CDS	Amet_4770	NC_009633.1	4899546	4901558	R	PFAM: phosphoesterase, RecJ domain protein; phosphoesterase, DHHA1; KEGG: cth:Cthe_2258 phosphoesterase, RecJ-like protein; phosphoesterase domain-containing protein	complement(4899546..4901558)	Alkaliphilus metalliredigens QYMF	5314935
YP_001322496.1	CDS	Amet_4771	NC_009633.1	4901591	4902520	R	KEGG: bld:BLi04355 YybS; hypothetical protein	complement(4901591..4902520)	Alkaliphilus metalliredigens QYMF	5314936
YP_001322497.1	CDS	Amet_4772	NC_009633.1	4902540	4902869	R	KEGG: cth:Cthe_2259 hypothetical protein; hypothetical protein	complement(4902540..4902869)	Alkaliphilus metalliredigens QYMF	5314937
YP_001322498.1	CDS	Amet_4773	NC_009633.1	4902998	4904008	R	KEGG: cno:NT01CX_1247 hypothetical protein; hypothetical protein	complement(4902998..4904008)	Alkaliphilus metalliredigens QYMF	5314938
YP_001322499.1	CDS	Amet_4774	NC_009633.1	4904133	4904399	R	PFAM: sigmaK-factor processing regulatory BofA; KEGG: cth:Cthe_2389 sigmaK-factor processing regulatory BofA; sigmaK-factor processing regulatory BofA	complement(4904133..4904399)	Alkaliphilus metalliredigens QYMF	5314939
YP_001322500.1	CDS	Amet_4775	NC_009633.1	4904631	4904954	R	KEGG: tte:TTE0043 hypothetical protein; hypothetical protein	complement(4904631..4904954)	Alkaliphilus metalliredigens QYMF	5314940
YP_001322501.1	CDS	Amet_4776	NC_009633.1	4905027	4906361	R	PFAM: PhoH family protein; SMART: Nucleotide binding protein, PINc; KEGG: bha:BH2629 PhoH-like ATPase; PhoH family protein	complement(4905027..4906361)	Alkaliphilus metalliredigens QYMF	5314941
YP_001322502.1	CDS	Amet_4777	NC_009633.1	4906615	4907775	R	PFAM: sodium/hydrogen exchanger; KEGG: ctc:CTC01423 putative Na(+)/H(+) antiporter; sodium/hydrogen exchanger	complement(4906615..4907775)	Alkaliphilus metalliredigens QYMF	5314942
YP_001322503.1	CDS	Amet_4778	NC_009633.1	4907772	4908125	R	KEGG: cth:Cthe_1401 hypothetical protein; hypothetical protein	complement(4907772..4908125)	Alkaliphilus metalliredigens QYMF	5314943
YP_001322504.1	CDS	recR	NC_009633.1	4908407	4909006	R	involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR	complement(4908407..4909006)	Alkaliphilus metalliredigens QYMF	5314944
YP_001322505.1	CDS	Amet_4780	NC_009633.1	4909037	4909381	R	PFAM: conserved hypothetical protein 103; KEGG: cno:NT01CX_0824 conserved hypothetical protein TIGR00103; hypothetical protein	complement(4909037..4909381)	Alkaliphilus metalliredigens QYMF	5314945
YP_001322506.1	CDS	Amet_4781	NC_009633.1	4909441	4911120	R	catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau	complement(4909441..4911120)	Alkaliphilus metalliredigens QYMF	5314946
YP_001322507.1	CDS	Amet_4782	NC_009633.1	4911192	4911881	R	KEGG: cth:Cthe_2712 hypothetical protein; hypothetical protein	complement(4911192..4911881)	Alkaliphilus metalliredigens QYMF	5314947
YP_001322508.1	CDS	Amet_4783	NC_009633.1	4911896	4913014	R	KEGG: cth:Cthe_2711 hypothetical protein; hypothetical protein	complement(4911896..4913014)	Alkaliphilus metalliredigens QYMF	5314948
YP_001322509.1	CDS	Amet_4784	NC_009633.1	4913016	4914104	R	KEGG: cth:Cthe_2710 uncharacterized membrane protein-like protein; hypothetical protein	complement(4913016..4914104)	Alkaliphilus metalliredigens QYMF	5314949
YP_001322510.1	CDS	Amet_4785	NC_009633.1	4914362	4914976	D	PFAM: protein of unknown function DUF1256; KEGG: cth:Cthe_2165 protein of unknown function DUF1256; hypothetical protein	4914362..4914976	Alkaliphilus metalliredigens QYMF	5314950
YP_001322511.1	CDS	Amet_4786	NC_009633.1	4915092	4915352	R	KEGG: cth:Cthe_0718 hypothetical protein; hypothetical protein	complement(4915092..4915352)	Alkaliphilus metalliredigens QYMF	5314951
YP_001322512.1	CDS	Amet_4787	NC_009633.1	4915373	4916269	R	PFAM: diacylglycerol kinase, catalytic region; KEGG: tte:TTE2787 hypothetical protein; diacylglycerol kinase catalytic subunit	complement(4915373..4916269)	Alkaliphilus metalliredigens QYMF	5314952
YP_001322513.1	CDS	Amet_4788	NC_009633.1	4916279	4916827	R	KEGG: cth:Cthe_2379 hypothetical protein; hypothetical protein	complement(4916279..4916827)	Alkaliphilus metalliredigens QYMF	5314953
YP_001322514.1	CDS	Amet_4789	NC_009633.1	4917022	4918167	R	TIGRFAM: cysteine desulfurase family protein; PFAM: aminotransferase, class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: tte:TTE2789 selenocysteine lyase; cysteine desulfurase	complement(4917022..4918167)	Alkaliphilus metalliredigens QYMF	5314954
YP_001322515.1	CDS	Amet_4790	NC_009633.1	4918257	4919171	R	TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: tte:TTE0729 predicted epimerase, PhzC/PhzF homolog; PhzF family phenazine biosynthesis protein	complement(4918257..4919171)	Alkaliphilus metalliredigens QYMF	5314955
YP_001322516.1	CDS	Amet_4791	NC_009633.1	4919218	4920087	R	TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: tte:TTE2790 predicted Transcriptional regulator; parB-like partition protein	complement(4919218..4920087)	Alkaliphilus metalliredigens QYMF	5314956
YP_001322517.1	CDS	Amet_4792	NC_009633.1	4920088	4920861	R	PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: cth:Cthe_2377 cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase	complement(4920088..4920861)	Alkaliphilus metalliredigens QYMF	5314957
YP_001322518.1	CDS	Amet_4793	NC_009633.1	4921040	4921309	D	PFAM: protein of unknown function UPF0016; KEGG: gvi:gsr0120 hypothetical protein; hypothetical protein	4921040..4921309	Alkaliphilus metalliredigens QYMF	5314958
YP_001322519.1	CDS	Amet_4794	NC_009633.1	4921375	4922187	R	TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: cth:Cthe_2362 ParB-like partition protein; parB-like partition protein	complement(4921375..4922187)	Alkaliphilus metalliredigens QYMF	5314959
YP_001322520.1	CDS	gidB	NC_009633.1	4922311	4923030	R	glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB	complement(4922311..4923030)	Alkaliphilus metalliredigens QYMF	5314960
YP_001322521.1	CDS	Amet_4796	NC_009633.1	4923030	4924922	R	GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA	complement(4923030..4924922)	Alkaliphilus metalliredigens QYMF	5314961
YP_001322522.1	CDS	trmE	NC_009633.1	4925074	4926459	R	in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE	complement(4925074..4926459)	Alkaliphilus metalliredigens QYMF	5314962
YP_001322523.1	CDS	Amet_4798	NC_009633.1	4926837	4927460	R	PFAM: single-stranded nucleic acid binding R3H domain protein; KEGG: cpe:CPE2656 SpoIIIJ-associated protein; single-stranded nucleic acid binding R3H domain-containing protein	complement(4926837..4927460)	Alkaliphilus metalliredigens QYMF	5314963
YP_001322524.1	CDS	Amet_4799	NC_009633.1	4927462	4928124	R	PFAM: 60 kDa inner membrane insertion protein; KEGG: mta:Moth_2521 60 kDa inner membrane insertion protein; 60 kDa inner membrane insertion protein	complement(4927462..4928124)	Alkaliphilus metalliredigens QYMF	5314964
YP_001322525.1	CDS	Amet_4800	NC_009633.1	4928154	4928363	R	PFAM: protein of unknown function DUF37; KEGG: bcl:ABC2506 hypothetical protein; hypothetical protein	complement(4928154..4928363)	Alkaliphilus metalliredigens QYMF	5314965
YP_001322526.1	CDS	rnpA	NC_009633.1	4928426	4928761	R	protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P	complement(4928426..4928761)	Alkaliphilus metalliredigens QYMF	5314966
YP_001322527.1	CDS	rpmH	NC_009633.1	4928814	4928948	R	in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34	complement(4928814..4928948)	Alkaliphilus metalliredigens QYMF	5314967
Amet_R0007	tRNA	Amet_R0007	NC_009633.1	38852	38928	D	tRNA-Arg	38852..38928	Alkaliphilus metalliredigens QYMF	5310058
Amet_R0008	tRNA	Amet_R0008	NC_009633.1	39483	39570	D	tRNA-Ser	39483..39570	Alkaliphilus metalliredigens QYMF	5310060
Amet_R0011	tRNA	Amet_R0011	NC_009633.1	50461	50536	D	tRNA-Ala	50461..50536	Alkaliphilus metalliredigens QYMF	5310075
Amet_R0015	tRNA	Amet_R0015	NC_009633.1	56089	56165	D	tRNA-Ile	56089..56165	Alkaliphilus metalliredigens QYMF	5310079
Amet_R0018	tRNA	Amet_R0018	NC_009633.1	996643	996716	D	tRNA-Gly	996643..996716	Alkaliphilus metalliredigens QYMF	5311002
Amet_R0019	tRNA	Amet_R0019	NC_009633.1	996725	996801	D	tRNA-Arg	996725..996801	Alkaliphilus metalliredigens QYMF	5311003
Amet_R0020	tRNA	Amet_R0020	NC_009633.1	996844	996919	D	tRNA-His	996844..996919	Alkaliphilus metalliredigens QYMF	5311004
Amet_R0021	tRNA	Amet_R0021	NC_009633.1	996956	997031	D	tRNA-His	996956..997031	Alkaliphilus metalliredigens QYMF	5311005
Amet_R0022	tRNA	Amet_R0022	NC_009633.1	997036	997111	D	tRNA-Gln	997036..997111	Alkaliphilus metalliredigens QYMF	5311006
Amet_R0023	tRNA	Amet_R0023	NC_009633.1	997147	997223	D	tRNA-Arg	997147..997223	Alkaliphilus metalliredigens QYMF	5311007
Amet_R0024	tRNA	Amet_R0024	NC_009633.1	997239	997315	D	tRNA-Arg	997239..997315	Alkaliphilus metalliredigens QYMF	5311008
Amet_R0025	tRNA	Amet_R0025	NC_009633.1	1009021	1009100	D	tRNA-OTHER	1009021..1009100	Alkaliphilus metalliredigens QYMF	5311017
Amet_R0026	tRNA	Amet_R0026	NC_009633.1	1715308	1715383	D	tRNA-Val	1715308..1715383	Alkaliphilus metalliredigens QYMF	5311680
Amet_R0027	tRNA	Amet_R0027	NC_009633.1	1715384	1715459	D	tRNA-Phe	1715384..1715459	Alkaliphilus metalliredigens QYMF	5311681
Amet_R0028	tRNA	Amet_R0028	NC_009633.1	1715478	1715552	D	tRNA-Cys	1715478..1715552	Alkaliphilus metalliredigens QYMF	5311682
Amet_R0030	tRNA	Amet_R0030	NC_009633.1	1838777	1838852	D	tRNA-Ala	1838777..1838852	Alkaliphilus metalliredigens QYMF	5311782
Amet_R0033	tRNA	Amet_R0033	NC_009633.1	1842385	1842459	D	tRNA-Asn	1842385..1842459	Alkaliphilus metalliredigens QYMF	5311785
Amet_R0034	tRNA	Amet_R0034	NC_009633.1	1842465	1842553	D	tRNA-Leu	1842465..1842553	Alkaliphilus metalliredigens QYMF	5311786
Amet_R0035	tRNA	Amet_R0035	NC_009633.1	1842569	1842644	D	tRNA-Met	1842569..1842644	Alkaliphilus metalliredigens QYMF	5311787
Amet_R0036	tRNA	Amet_R0036	NC_009633.1	1842650	1842726	D	tRNA-Met	1842650..1842726	Alkaliphilus metalliredigens QYMF	5311788
Amet_R0037	tRNA	Amet_R0037	NC_009633.1	1842736	1842810	D	tRNA-Glu	1842736..1842810	Alkaliphilus metalliredigens QYMF	5311789
Amet_R0038	tRNA	Amet_R0038	NC_009633.1	1842819	1842894	D	tRNA-Val	1842819..1842894	Alkaliphilus metalliredigens QYMF	5311790
Amet_R0039	tRNA	Amet_R0039	NC_009633.1	1843020	1843096	D	tRNA-Asp	1843020..1843096	Alkaliphilus metalliredigens QYMF	5311791
Amet_R0040	tRNA	Amet_R0040	NC_009633.1	1843166	1843250	D	tRNA-Tyr	1843166..1843250	Alkaliphilus metalliredigens QYMF	5311792
Amet_R0041	tRNA	Amet_R0041	NC_009633.1	1843290	1843372	D	tRNA-Leu	1843290..1843372	Alkaliphilus metalliredigens QYMF	5311793
Amet_R0042	tRNA	Amet_R0042	NC_009633.1	1843694	1843768	D	tRNA-Gly	1843694..1843768	Alkaliphilus metalliredigens QYMF	5311794
Amet_R0043	tRNA	Amet_R0043	NC_009633.1	1843781	1843856	D	tRNA-His	1843781..1843856	Alkaliphilus metalliredigens QYMF	5311795
Amet_R0044	tRNA	Amet_R0044	NC_009633.1	1843869	1843943	D	tRNA-Cys	1843869..1843943	Alkaliphilus metalliredigens QYMF	5311796
Amet_R0045	tRNA	Amet_R0045	NC_009633.1	1843948	1844024	D	tRNA-Arg	1843948..1844024	Alkaliphilus metalliredigens QYMF	5311797
Amet_R0046	tRNA	Amet_R0046	NC_009633.1	2399957	2400049	D	tRNA-Sec	2399957..2400049	Alkaliphilus metalliredigens QYMF	5312403
Amet_R0047	tRNA	Amet_R0047	NC_009633.1	2847478	2847546	R	tRNA-OTHER	complement(2847478..2847546)	Alkaliphilus metalliredigens QYMF	5312903
Amet_R0048	tRNA	Amet_R0048	NC_009633.1	2867783	2867859	R	tRNA-Pro	complement(2867783..2867859)	Alkaliphilus metalliredigens QYMF	5312927
Amet_R0050	tRNA	Amet_R0050	NC_009633.1	3165279	3165365	R	tRNA-Leu	complement(3165279..3165365)	Alkaliphilus metalliredigens QYMF	5313197
Amet_R0051	tRNA	Amet_R0051	NC_009633.1	3174464	3174550	D	tRNA-Leu	3174464..3174550	Alkaliphilus metalliredigens QYMF	5313205
Amet_R0052	tRNA	Amet_R0052	NC_009633.1	3221892	3221967	D	tRNA-Ala	3221892..3221967	Alkaliphilus metalliredigens QYMF	5313250
Amet_R0053	tRNA	Amet_R0053	NC_009633.1	3236999	3237075	R	tRNA-Val	complement(3236999..3237075)	Alkaliphilus metalliredigens QYMF	5313264
Amet_R0054	tRNA	Amet_R0054	NC_009633.1	3362100	3362174	R	tRNA-Thr	complement(3362100..3362174)	Alkaliphilus metalliredigens QYMF	5313392
Amet_R0056	tRNA	Amet_R0056	NC_009633.1	4429238	4429313	R	tRNA-Phe	complement(4429238..4429313)	Alkaliphilus metalliredigens QYMF	5314399
Amet_R0057	tRNA	Amet_R0057	NC_009633.1	4429323	4429399	R	tRNA-Ile	complement(4429323..4429399)	Alkaliphilus metalliredigens QYMF	5314400
Amet_R0058	tRNA	Amet_R0058	NC_009633.1	4429405	4429480	R	tRNA-Lys	complement(4429405..4429480)	Alkaliphilus metalliredigens QYMF	5314401
Amet_R0059	tRNA	Amet_R0059	NC_009633.1	4429485	4429559	R	tRNA-Gly	complement(4429485..4429559)	Alkaliphilus metalliredigens QYMF	5314402
Amet_R0060	tRNA	Amet_R0060	NC_009633.1	4429587	4429669	R	tRNA-Leu	complement(4429587..4429669)	Alkaliphilus metalliredigens QYMF	5314403
Amet_R0061	tRNA	Amet_R0061	NC_009633.1	4429807	4429891	R	tRNA-Tyr	complement(4429807..4429891)	Alkaliphilus metalliredigens QYMF	5314404
Amet_R0062	tRNA	Amet_R0062	NC_009633.1	4429904	4429979	R	tRNA-Thr	complement(4429904..4429979)	Alkaliphilus metalliredigens QYMF	5314405
Amet_R0063	tRNA	Amet_R0063	NC_009633.1	4429993	4430069	R	tRNA-Asp	complement(4429993..4430069)	Alkaliphilus metalliredigens QYMF	5314406
Amet_R0064	tRNA	Amet_R0064	NC_009633.1	4430196	4430271	R	tRNA-Val	complement(4430196..4430271)	Alkaliphilus metalliredigens QYMF	5314407
Amet_R0065	tRNA	Amet_R0065	NC_009633.1	4430284	4430358	R	tRNA-Glu	complement(4430284..4430358)	Alkaliphilus metalliredigens QYMF	5314408
Amet_R0066	tRNA	Amet_R0066	NC_009633.1	4430365	4430440	R	tRNA-Met	complement(4430365..4430440)	Alkaliphilus metalliredigens QYMF	5314409
Amet_R0067	tRNA	Amet_R0067	NC_009633.1	4430456	4430544	R	tRNA-Leu	complement(4430456..4430544)	Alkaliphilus metalliredigens QYMF	5314410
Amet_R0068	tRNA	Amet_R0068	NC_009633.1	4430550	4430624	R	tRNA-Asn	complement(4430550..4430624)	Alkaliphilus metalliredigens QYMF	5314411
Amet_R0072	tRNA	Amet_R0072	NC_009633.1	4436016	4436089	R	tRNA-Gly	complement(4436016..4436089)	Alkaliphilus metalliredigens QYMF	5314415
Amet_R0073	tRNA	Amet_R0073	NC_009633.1	4436098	4436173	R	tRNA-Thr	complement(4436098..4436173)	Alkaliphilus metalliredigens QYMF	5314416
Amet_R0074	tRNA	Amet_R0074	NC_009633.1	4436187	4436263	R	tRNA-Asp	complement(4436187..4436263)	Alkaliphilus metalliredigens QYMF	5314417
Amet_R0075	tRNA	Amet_R0075	NC_009633.1	4436276	4436352	R	tRNA-Met	complement(4436276..4436352)	Alkaliphilus metalliredigens QYMF	5314418
Amet_R0076	tRNA	Amet_R0076	NC_009633.1	4436436	4436511	R	tRNA-Met	complement(4436436..4436511)	Alkaliphilus metalliredigens QYMF	5314419
Amet_R0077	tRNA	Amet_R0077	NC_009633.1	4436589	4436664	R	tRNA-Phe	complement(4436589..4436664)	Alkaliphilus metalliredigens QYMF	5314420
Amet_R0078	tRNA	Amet_R0078	NC_009633.1	4436674	4436750	R	tRNA-Ile	complement(4436674..4436750)	Alkaliphilus metalliredigens QYMF	5314421
Amet_R0079	tRNA	Amet_R0079	NC_009633.1	4436756	4436832	R	tRNA-Pro	complement(4436756..4436832)	Alkaliphilus metalliredigens QYMF	5314422
Amet_R0080	tRNA	Amet_R0080	NC_009633.1	4436839	4436914	R	tRNA-Trp	complement(4436839..4436914)	Alkaliphilus metalliredigens QYMF	5314423
Amet_R0081	tRNA	Amet_R0081	NC_009633.1	4436937	4437013	R	tRNA-Met	complement(4436937..4437013)	Alkaliphilus metalliredigens QYMF	5314424
Amet_R0082	tRNA	Amet_R0082	NC_009633.1	4437028	4437104	R	tRNA-Pro	complement(4437028..4437104)	Alkaliphilus metalliredigens QYMF	5314425
Amet_R0083	tRNA	Amet_R0083	NC_009633.1	4437114	4437205	R	tRNA-Ser	complement(4437114..4437205)	Alkaliphilus metalliredigens QYMF	5314426
Amet_R0084	tRNA	Amet_R0084	NC_009633.1	4437220	4437308	R	tRNA-Ser	complement(4437220..4437308)	Alkaliphilus metalliredigens QYMF	5314427
Amet_R0085	tRNA	Amet_R0085	NC_009633.1	4437317	4437392	R	tRNA-Lys	complement(4437317..4437392)	Alkaliphilus metalliredigens QYMF	5314428
Amet_R0086	tRNA	Amet_R0086	NC_009633.1	4437397	4437472	R	tRNA-Gln	complement(4437397..4437472)	Alkaliphilus metalliredigens QYMF	5314429
Amet_R0087	tRNA	Amet_R0087	NC_009633.1	4437479	4437555	R	tRNA-Arg	complement(4437479..4437555)	Alkaliphilus metalliredigens QYMF	5314430
Amet_R0088	tRNA	Amet_R0088	NC_009633.1	4437564	4437637	R	tRNA-Gly	complement(4437564..4437637)	Alkaliphilus metalliredigens QYMF	5314431
Amet_R0089	tRNA	Amet_R0089	NC_009633.1	4437646	4437721	R	tRNA-Thr	complement(4437646..4437721)	Alkaliphilus metalliredigens QYMF	5314432
Amet_R0090	tRNA	Amet_R0090	NC_009633.1	4437735	4437811	R	tRNA-Asp	complement(4437735..4437811)	Alkaliphilus metalliredigens QYMF	5314433
Amet_R0091	tRNA	Amet_R0091	NC_009633.1	4437937	4438012	R	tRNA-Val	complement(4437937..4438012)	Alkaliphilus metalliredigens QYMF	5314434
Amet_R0092	tRNA	Amet_R0092	NC_009633.1	4438025	4438099	R	tRNA-Glu	complement(4438025..4438099)	Alkaliphilus metalliredigens QYMF	5314435
Amet_R0093	tRNA	Amet_R0093	NC_009633.1	4438106	4438181	R	tRNA-Met	complement(4438106..4438181)	Alkaliphilus metalliredigens QYMF	5314436
Amet_R0097	tRNA	Amet_R0097	NC_009633.1	4444760	4444833	R	tRNA-Gly	complement(4444760..4444833)	Alkaliphilus metalliredigens QYMF	5314441
Amet_R0098	tRNA	Amet_R0098	NC_009633.1	4444870	4444946	R	tRNA-Met	complement(4444870..4444946)	Alkaliphilus metalliredigens QYMF	5314442
Amet_R0099	tRNA	Amet_R0099	NC_009633.1	4445030	4445105	R	tRNA-Met	complement(4445030..4445105)	Alkaliphilus metalliredigens QYMF	5314443
Amet_R0100	tRNA	Amet_R0100	NC_009633.1	4445183	4445258	R	tRNA-Phe	complement(4445183..4445258)	Alkaliphilus metalliredigens QYMF	5314444
Amet_R0101	tRNA	Amet_R0101	NC_009633.1	4445268	4445344	R	tRNA-Ile	complement(4445268..4445344)	Alkaliphilus metalliredigens QYMF	5314445
Amet_R0102	tRNA	Amet_R0102	NC_009633.1	4445350	4445426	R	tRNA-Pro	complement(4445350..4445426)	Alkaliphilus metalliredigens QYMF	5314446
Amet_R0103	tRNA	Amet_R0103	NC_009633.1	4445433	4445508	R	tRNA-Trp	complement(4445433..4445508)	Alkaliphilus metalliredigens QYMF	5314447
Amet_R0104	tRNA	Amet_R0104	NC_009633.1	4445531	4445607	R	tRNA-Met	complement(4445531..4445607)	Alkaliphilus metalliredigens QYMF	5314448
Amet_R0105	tRNA	Amet_R0105	NC_009633.1	4445622	4445698	R	tRNA-Pro	complement(4445622..4445698)	Alkaliphilus metalliredigens QYMF	5314449
Amet_R0106	tRNA	Amet_R0106	NC_009633.1	4445708	4445799	R	tRNA-Ser	complement(4445708..4445799)	Alkaliphilus metalliredigens QYMF	5314450
Amet_R0107	tRNA	Amet_R0107	NC_009633.1	4445814	4445902	R	tRNA-Ser	complement(4445814..4445902)	Alkaliphilus metalliredigens QYMF	5314451
Amet_R0108	tRNA	Amet_R0108	NC_009633.1	4445911	4445986	R	tRNA-Lys	complement(4445911..4445986)	Alkaliphilus metalliredigens QYMF	5314452
Amet_R0109	tRNA	Amet_R0109	NC_009633.1	4445991	4446065	R	tRNA-Gly	complement(4445991..4446065)	Alkaliphilus metalliredigens QYMF	5314453
Amet_R0110	tRNA	Amet_R0110	NC_009633.1	4446093	4446175	R	tRNA-Leu	complement(4446093..4446175)	Alkaliphilus metalliredigens QYMF	5314454
Amet_R0111	tRNA	Amet_R0111	NC_009633.1	4446260	4446344	R	tRNA-Tyr	complement(4446260..4446344)	Alkaliphilus metalliredigens QYMF	5314455
Amet_R0112	tRNA	Amet_R0112	NC_009633.1	4446357	4446432	R	tRNA-Thr	complement(4446357..4446432)	Alkaliphilus metalliredigens QYMF	5314456
Amet_R0113	tRNA	Amet_R0113	NC_009633.1	4446446	4446522	R	tRNA-Asp	complement(4446446..4446522)	Alkaliphilus metalliredigens QYMF	5314457
Amet_R0114	tRNA	Amet_R0114	NC_009633.1	4446648	4446723	R	tRNA-Val	complement(4446648..4446723)	Alkaliphilus metalliredigens QYMF	5314458
Amet_R0115	tRNA	Amet_R0115	NC_009633.1	4446736	4446810	R	tRNA-Glu	complement(4446736..4446810)	Alkaliphilus metalliredigens QYMF	5314459
Amet_R0116	tRNA	Amet_R0116	NC_009633.1	4446817	4446892	R	tRNA-Met	complement(4446817..4446892)	Alkaliphilus metalliredigens QYMF	5314460
Amet_R0117	tRNA	Amet_R0117	NC_009633.1	4446907	4446995	R	tRNA-Leu	complement(4446907..4446995)	Alkaliphilus metalliredigens QYMF	5314461
Amet_R0118	tRNA	Amet_R0118	NC_009633.1	4447001	4447075	R	tRNA-Asn	complement(4447001..4447075)	Alkaliphilus metalliredigens QYMF	5314462
Amet_R0121	tRNA	Amet_R0121	NC_009633.1	4450484	4450559	R	tRNA-Ala	complement(4450484..4450559)	Alkaliphilus metalliredigens QYMF	5314465
Amet_R0123	tRNA	Amet_R0123	NC_009633.1	4452537	4452612	R	tRNA-Phe	complement(4452537..4452612)	Alkaliphilus metalliredigens QYMF	5314467
Amet_R0124	tRNA	Amet_R0124	NC_009633.1	4452622	4452698	R	tRNA-Ile	complement(4452622..4452698)	Alkaliphilus metalliredigens QYMF	5314468
Amet_R0125	tRNA	Amet_R0125	NC_009633.1	4452703	4452778	R	tRNA-Lys	complement(4452703..4452778)	Alkaliphilus metalliredigens QYMF	5314469
Amet_R0126	tRNA	Amet_R0126	NC_009633.1	4452783	4452858	R	tRNA-Gln	complement(4452783..4452858)	Alkaliphilus metalliredigens QYMF	5314470
Amet_R0127	tRNA	Amet_R0127	NC_009633.1	4452865	4452941	R	tRNA-Arg	complement(4452865..4452941)	Alkaliphilus metalliredigens QYMF	5314471
Amet_R0128	tRNA	Amet_R0128	NC_009633.1	4452950	4453023	R	tRNA-Gly	complement(4452950..4453023)	Alkaliphilus metalliredigens QYMF	5314472
Amet_R0129	tRNA	Amet_R0129	NC_009633.1	4453032	4453107	R	tRNA-Thr	complement(4453032..4453107)	Alkaliphilus metalliredigens QYMF	5314473
Amet_R0130	tRNA	Amet_R0130	NC_009633.1	4453241	4453316	R	tRNA-Val	complement(4453241..4453316)	Alkaliphilus metalliredigens QYMF	5314474
Amet_R0131	tRNA	Amet_R0131	NC_009633.1	4453329	4453403	R	tRNA-Glu	complement(4453329..4453403)	Alkaliphilus metalliredigens QYMF	5314475
Amet_R0138	tRNA	Amet_R0138	NC_009633.1	4894590	4894664	R	tRNA-Glu	complement(4894590..4894664)	Alkaliphilus metalliredigens QYMF	5314928
Amet_R0139	tRNA	Amet_R0139	NC_009633.1	4894718	4894793	R	tRNA-Lys	complement(4894718..4894793)	Alkaliphilus metalliredigens QYMF	5314929
Amet_R0001	rRNA	Amet_R0001	NC_009633.1	11329	12849	D	16S ribosomal RNA	11329..12849	Alkaliphilus metalliredigens QYMF	5310037
Amet_R0002	rRNA	Amet_R0002	NC_009633.1	13209	16143	D	23S ribosomal RNA	13209..16143	Alkaliphilus metalliredigens QYMF	5310038
Amet_R0003	rRNA	Amet_R0003	NC_009633.1	16271	16386	D	5S ribosomal RNA	16271..16386	Alkaliphilus metalliredigens QYMF	5310039
Amet_R0004	rRNA	Amet_R0004	NC_009633.1	22384	23904	D	16S ribosomal RNA	22384..23904	Alkaliphilus metalliredigens QYMF	5310046
Amet_R0005	rRNA	Amet_R0005	NC_009633.1	24268	27202	D	23S ribosomal RNA	24268..27202	Alkaliphilus metalliredigens QYMF	5310047
Amet_R0006	rRNA	Amet_R0006	NC_009633.1	27463	27578	D	5S ribosomal RNA	27463..27578	Alkaliphilus metalliredigens QYMF	5310048
Amet_R0010	rRNA	Amet_R0010	NC_009633.1	48874	50394	D	16S ribosomal RNA	48874..50394	Alkaliphilus metalliredigens QYMF	5310074
Amet_R0012	rRNA	Amet_R0012	NC_009633.1	50776	53710	D	23S ribosomal RNA	50776..53710	Alkaliphilus metalliredigens QYMF	5310076
Amet_R0013	rRNA	Amet_R0013	NC_009633.1	53891	54006	D	5S ribosomal RNA	53891..54006	Alkaliphilus metalliredigens QYMF	5310077
Amet_R0014	rRNA	Amet_R0014	NC_009633.1	54401	55921	D	16S ribosomal RNA	54401..55921	Alkaliphilus metalliredigens QYMF	5310078
Amet_R0016	rRNA	Amet_R0016	NC_009633.1	56325	59259	D	23S ribosomal RNA	56325..59259	Alkaliphilus metalliredigens QYMF	5310080
Amet_R0017	rRNA	Amet_R0017	NC_009633.1	59440	59555	D	5S ribosomal RNA	59440..59555	Alkaliphilus metalliredigens QYMF	5310081
Amet_R0029	rRNA	Amet_R0029	NC_009633.1	1837188	1838708	D	16S ribosomal RNA	1837188..1838708	Alkaliphilus metalliredigens QYMF	5311781
Amet_R0031	rRNA	Amet_R0031	NC_009633.1	1839146	1842080	D	23S ribosomal RNA	1839146..1842080	Alkaliphilus metalliredigens QYMF	5311783
Amet_R0032	rRNA	Amet_R0032	NC_009633.1	1842262	1842377	D	5S ribosomal RNA	1842262..1842377	Alkaliphilus metalliredigens QYMF	5311784
Amet_R0069	rRNA	Amet_R0069	NC_009633.1	4430632	4430747	R	5S ribosomal RNA	complement(4430632..4430747)	Alkaliphilus metalliredigens QYMF	5314412
Amet_R0070	rRNA	Amet_R0070	NC_009633.1	4430876	4433810	R	23S ribosomal RNA	complement(4430876..4433810)	Alkaliphilus metalliredigens QYMF	5314413
Amet_R0071	rRNA	Amet_R0071	NC_009633.1	4434170	4435690	R	16S ribosomal RNA	complement(4434170..4435690)	Alkaliphilus metalliredigens QYMF	5314414
Amet_R0094	rRNA	Amet_R0094	NC_009633.1	4438249	4438364	R	5S ribosomal RNA	complement(4438249..4438364)	Alkaliphilus metalliredigens QYMF	5314437
Amet_R0095	rRNA	Amet_R0095	NC_009633.1	4438493	4441427	R	23S ribosomal RNA	complement(4438493..4441427)	Alkaliphilus metalliredigens QYMF	5314438
Amet_R0096	rRNA	Amet_R0096	NC_009633.1	4441686	4443206	R	16S ribosomal RNA	complement(4441686..4443206)	Alkaliphilus metalliredigens QYMF	5314439
Amet_R0119	rRNA	Amet_R0119	NC_009633.1	4447083	4447198	R	5S ribosomal RNA	complement(4447083..4447198)	Alkaliphilus metalliredigens QYMF	5314463
Amet_R0120	rRNA	Amet_R0120	NC_009633.1	4447380	4450314	R	23S ribosomal RNA	complement(4447380..4450314)	Alkaliphilus metalliredigens QYMF	5314464
Amet_R0122	rRNA	Amet_R0122	NC_009633.1	4450628	4452148	R	16S ribosomal RNA	complement(4450628..4452148)	Alkaliphilus metalliredigens QYMF	5314466
Amet_R0132	rRNA	Amet_R0132	NC_009633.1	4453407	4453522	R	5S ribosomal RNA	complement(4453407..4453522)	Alkaliphilus metalliredigens QYMF	5314476
Amet_R0133	rRNA	Amet_R0133	NC_009633.1	4453686	4456620	R	23S ribosomal RNA	complement(4453686..4456620)	Alkaliphilus metalliredigens QYMF	5314477
Amet_R0134	rRNA	Amet_R0134	NC_009633.1	4457012	4458532	R	16S ribosomal RNA	complement(4457012..4458532)	Alkaliphilus metalliredigens QYMF	5314478
Amet_R0135	rRNA	Amet_R0135	NC_009633.1	4628340	4628455	R	5S ribosomal RNA	complement(4628340..4628455)	Alkaliphilus metalliredigens QYMF	5314684
Amet_R0136	rRNA	Amet_R0136	NC_009633.1	4628636	4631570	R	23S ribosomal RNA	complement(4628636..4631570)	Alkaliphilus metalliredigens QYMF	5314685
Amet_R0137	rRNA	Amet_R0137	NC_009633.1	4631934	4633454	R	16S ribosomal RNA	complement(4631934..4633454)	Alkaliphilus metalliredigens QYMF	5314686