-- dump date   	20140618_194335
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
YP_001511567.1	binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.
YP_001511568.1	binds the polymerase to DNA and acts as a sliding clamp
YP_001511569.1	PFAM: RNA-binding S4 domain protein; KEGG: amt:Amet_0003 RNA-binding S4 domain protein
YP_001511570.1	Required for DNA replication; binds preferentially to single-stranded, linear DNA
YP_001511571.1	KEGG: amt:Amet_0005 conserved hypothetical protein
YP_001511572.1	KEGG: amt:Amet_0006 DNA gyrase, B subunit; TIGRFAM: DNA gyrase, B subunit; PFAM: DNA gyrase subunit B domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA topoisomerase type IIA subunit B region 2 domain protein; SMART: DNA topoisomerase II
YP_001511573.1	KEGG: amt:Amet_0007 DNA gyrase, A subunit; TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller
YP_001511574.1	TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: amt:Amet_0008 anti-sigma-factor antagonist
YP_001511575.1	KEGG: amt:Amet_0009 putative anti-sigma regulatory factor, serine/threonine protein kinase
YP_001511576.1	TIGRFAM: RNA polymerase sigma-70; RNA polymerase sigma-B/F/G type; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: amt:Amet_0010 phage transcriptional regulator, RinA family
YP_001511577.1	PFAM: 3H domain protein; Helix-turn-helix type 11 domain protein; KEGG: amt:Amet_0020 3H domain protein
YP_001511578.1	KEGG: amt:Amet_0021 phosphotransferase system, EIIC
YP_001511579.1	KEGG: amt:Amet_0023 hypothetical protein
YP_001511580.1	catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_001511582.1	PFAM: peptidase S41; KEGG: ctc:CTC01477 hypothetical protein
YP_001511583.1	PFAM: YCII-related; KEGG: amt:Amet_4264 YCII-related
YP_001511584.1	PFAM: CMP/dCMP deaminase zinc-binding; KEGG: amt:Amet_0026 CMP/dCMP deaminase, zinc-binding
YP_001511585.1	TIGRFAM: lipoyltransferase and lipoate-protein ligase; PFAM: biotin/lipoate A/B protein ligase; KEGG: cbo:CBO1635 lipoate-protein ligase
YP_001511586.1	KEGG: cth:Cthe_2130 hypothetical protein
YP_001511587.1	KEGG: cth:Cthe_2131 hypothetical protein
YP_001511588.1	PFAM: SirA family protein; KEGG: amt:Amet_0027 SirA family protein
YP_001511589.1	KEGG: amt:Amet_0028 conserved hypothetical protein
YP_001511590.1	PFAM: protein of unknown function DUF951; KEGG: amt:Amet_0030 protein of unknown function DUF951
YP_001511591.1	PFAM: aminotransferase class I and II; KEGG: amt:Amet_0031 putative transcriptional regulator, GntR family
YP_001511592.1	KEGG: amt:Amet_0663 sigma54 specific transcriptional regulator, Fis family; TIGRFAM: PAS sensor protein; PFAM: CBS domain containing protein; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; PAS fold domain protein; SMART: PAS domain containing protein; AAA ATPase
YP_001511593.1	PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: amt:Amet_0664 respiratory-chain NADH dehydrogenase domain, 51 kDa subunit
YP_001511594.1	PFAM: Glycine/sarcosine/betaine reductase complex protein B alpha and beta subunits; KEGG: amt:Amet_0665 D-proline reductase (dithiol)
YP_001511595.1	KEGG: amt:Amet_0666 hypothetical protein
YP_001511596.1	KEGG: cbo:CBO2477 subunit of proline reductase; Contains selenocysteine
YP_001511597.1	KEGG: cdf:CD3240 hypothetical protein
YP_001511598.1	KEGG: amt:Amet_0670 D-proline reductase (dithiol)
YP_001511599.1	PFAM: proline racemase; KEGG: amt:Amet_0671 proline racemase
YP_001511600.1	KEGG: cbo:CBO3180 membrane protein
YP_001511601.1	binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21
YP_001511602.1	TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: amt:Amet_0033 single-strand binding protein
YP_001511603.1	binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit
YP_001511604.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tde:TDE0028 ABC transporter, ATP-binding protein, HlyB family
YP_001511605.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tde:TDE1061 ABC transporter, ATP-binding/permease protein, HlyB family
YP_001511606.1	KEGG: lca:LSEI_2600 predicted signal transduction protein with a C-terminal HATPase domain
YP_001511607.1	PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: tde:TDE0033 DNA-binding response regulator
YP_001511608.1	TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain protein; KEGG: amt:Amet_1075 shikimate 5-dehydrogenase
YP_001511609.1	KEGG: amt:Amet_0036 conserved hypothetical protein
YP_001511610.1	TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: ribosomal protein L25; KEGG: amt:Amet_0037 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
YP_001511611.1	TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: ribosomal protein L25; KEGG: amt:Amet_0038 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
YP_001511613.1	PFAM: protein of unknown function DUF988; KEGG: amt:Amet_0013 protein of unknown function DUF988
YP_001511614.1	KEGG: cdf:CD2383 putative sigma-54 interacting regulatory protein; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; Propionate catabolism activator domain protein; PAS fold domain protein; SMART: PAS domain containing protein; AAA ATPase
YP_001511615.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; thiamine pyrophosphate protein domain protein TPP-binding; KEGG: cdf:CD2381 indolepyruvate oxidoreductase subunit
YP_001511616.1	Involved in the incorporation of exogenous aryl acids in the biosynthesis of aromatic amino acids: catalysis of the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
YP_001511617.1	KEGG: cac:CAC0198 uncharacterized membrane protein, ortholog YyaS Bacillus subtilis
YP_001511618.1	PFAM: chemotaxis sensory transducer; KEGG: amt:Amet_0043 methyl-accepting chemotaxis sensory transducer
YP_001511619.1	PFAM: protein of unknown function DUF156; KEGG: amt:Amet_0044 protein of unknown function DUF156
YP_001511620.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper ion binding protein; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: dsy:DSY4510 hypothetical protein
YP_001511621.1	TIGRFAM: copper ion binding protein; PFAM: Heavy metal transport/detoxification protein; KEGG: amt:Amet_0045 heavy metal transport/detoxification protein
YP_001511622.1	PFAM: helix-turn-helix- domain containing protein AraC type; glycoside hydrolase family 39; KEGG: cbe:Cbei_3047 xylan 1,4-beta-xylosidase
YP_001511623.1	PFAM: aminodeoxychorismate lyase; KEGG: amt:Amet_0046 aminodeoxychorismate lyase
YP_001511624.1	KEGG: amt:Amet_0311 acyltransferase 3
YP_001511625.1	PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: amt:Amet_0081 Orn/Lys/Arg decarboxylase, major region
YP_001511626.1	PFAM: thymidylate kinase; KEGG: amt:Amet_0082 dTMP kinase
YP_001511627.1	PFAM: protein of unknown function DUF970; KEGG: amt:Amet_0083 protein of unknown function DUF970
YP_001511628.1	TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: amt:Amet_0084 DNA polymerase III, delta prime subunit
YP_001511629.1	PFAM: PSP1 domain protein; KEGG: amt:Amet_0085 PSP1 domain protein
YP_001511630.1	function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain
YP_001511631.1	catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein
YP_001511632.1	TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; KEGG: amt:Amet_1355 glycine cleavage system H protein
YP_001511633.1	acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 2 to form the P protein
YP_001511634.1	acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein
YP_001511635.1	PFAM: sigma-54 factor interaction domain-containing protein; ATPase associated with various cellular activities AAA_5; PAS fold domain protein; SMART: PAS domain containing protein; AAA ATPase; KEGG: cdf:CD2732 putative sigma-54-interacting regulatory protein
YP_001511636.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; KEGG: cdf:CD2381 indolepyruvate oxidoreductase subunit
YP_001511637.1	Involved in the incorporation of exogenous aryl acids in the biosynthesis of aromatic amino acids: catalysis of the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
YP_001511638.1	catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate
YP_001511639.1	TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; KEGG: chy:CHY_1929 histidinol-phosphate aminotransferase
YP_001511640.1	TIGRFAM: PAS sensor protein; KEGG: mta:Moth_1931 hypothetical protein
YP_001511641.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cth:Cthe_1959 methyltransferase type 11
YP_001511642.1	KEGG: amt:Amet_1860 hypothetical protein
YP_001511643.1	PFAM: pentapeptide repeat protein; KEGG: mba:Mbar_A3729 hypothetical protein
YP_001511644.1	KEGG: cbo:CBO1621 5,10-methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase
YP_001511645.1	PFAM: Vitamin B12 dependent methionine synthase activation region; KEGG: cbe:Cbei_1401 vitamin B12 dependent methionine synthase, activation region
YP_001511646.1	PFAM: dihydropteroate synthase DHPS; homocysteine S-methyltransferase; Methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; KEGG: cbo:CBO1623 methionine synthase
YP_001511647.1	KEGG: bld:BLi03495 YvqG
YP_001511648.1	PFAM: transcriptional regulator PadR family protein; KEGG: cac:CAC0571 predicted transcriptional regulator
YP_001511649.1	PFAM: alpha/beta hydrolase fold; KEGG: amt:Amet_0462 alpha/beta hydrolase fold
YP_001511650.1	KEGG: cbe:Cbei_0411 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase
YP_001511651.1	KEGG: amt:Amet_4533 sigma54 specific transcriptional regulator, Fis family; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; PAS fold domain protein; SMART: PAS domain containing protein; AAA ATPase
YP_001511652.1	PFAM: coenzyme A transferase; KEGG: amt:Amet_4532 coenzyme A transferase
YP_001511653.1	PFAM: Gluconate transporter; Citrate transporter; KEGG: amt:Amet_4531 citrate transporter
YP_001511654.1	converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA
YP_001511655.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: amt:Amet_4631 3-oxoacyl-(acyl-carrier-protein) reductase
YP_001511656.1	PFAM: MaoC domain protein dehydratase; KEGG: cbe:Cbei_3349 MaoC domain protein dehydratase
YP_001511657.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: amt:Amet_3091 acyl-CoA dehydrogenase domain protein
YP_001511658.1	PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: amt:Amet_3090 electron transfer flavoprotein, alpha/beta-subunit-like protein
YP_001511659.1	PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: amt:Amet_3089 electron transfer flavoprotein, alpha/beta-subunit-like protein
YP_001511660.1	KEGG: drm:Dred_2831 hypothetical protein
YP_001511661.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: dsy:DSY1106 hypothetical protein
YP_001511662.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: cbo:CBO0353 two-component sensor kinase
YP_001511663.1	KEGG: dsy:DSY1108 hypothetical protein
YP_001511664.1	KEGG: amt:Amet_1370 collagen triple helix repeat
YP_001511665.1	PFAM: Collagen triple helix repeat; KEGG: bat:BAS1130 hypothetical protein
YP_001511666.1	PFAM: Collagen triple helix repeat; KEGG: cdf:CD3349 putative exosporium glycoprotein
YP_001511667.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ctc:CTC00588 ABC transporter ATP-binding protein
YP_001511669.1	KEGG: cpf:CPF_1134 hypothetical protein
YP_001511670.1	PFAM: GCN5-related N-acetyltransferase; KEGG: ssa:SSA_1986 acetyltransferase, GNAT family, putative
YP_001511671.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cpr:CPR_0075 putative methyltransferase
YP_001511672.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cdf:CD1963 hypothetical protein
YP_001511673.1	PFAM: Methyltransferase type 11; KEGG: fnu:FN0736 methyltransferase
YP_001511674.1	PFAM: GCN5-related N-acetyltransferase; KEGG: csc:Csac_0988 GCN5-related N-acetyltransferase
YP_001511675.1	PFAM: GCN5-related N-acetyltransferase; KEGG: cbo:CBO0859 acetyltransferase
YP_001511676.1	KEGG: oih:OB0254 hypothetical protein
YP_001511677.1	PFAM: peptidase S51 dipeptidase E; KEGG: tte:TTE2723 peptidase E
YP_001511678.1	PFAM: GCN5-related N-acetyltransferase; KEGG: vvy:VV1879 putative acetyltransferase
YP_001511679.1	PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: cpf:CPF_2402 hypothetical protein
YP_001511680.1	PFAM: GCN5-related N-acetyltransferase; KEGG: amt:Amet_2241 GCN5-related N-acetyltransferase
YP_001511681.1	PFAM: GCN5-related N-acetyltransferase; KEGG: fnu:FN0657 acetyltransferase
YP_001511682.1	KEGG: amt:Amet_2249 hypothetical protein
YP_001511683.1	PFAM: GCN5-related N-acetyltransferase; KEGG: oih:OB0365 hypothetical protein
YP_001511684.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ctc:CTC00163 transcriptional regulatory protein
YP_001511685.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ctc:CTC00162 ABC-type multidrug transport system
YP_001511686.1	KEGG: ctc:CTC00160 putative ABC-2 type transport system permease protein
YP_001511687.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ctc:CTC00159 sensory transduction protein kinase
YP_001511688.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: efa:EF2082 ABC transporter, ATP-binding protein
YP_001511689.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: amt:Amet_3893 binding-protein-dependent transport systems inner membrane component
YP_001511690.1	Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway
YP_001511691.1	KEGG: amt:Amet_3645 glutamate 5-kinase; TIGRFAM: glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase
YP_001511692.1	KEGG: amt:Amet_2533 pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein
YP_001511693.1	TIGRFAM: signal peptidase I; PFAM: peptidase S24 S26A and S26B; KEGG: amt:Amet_3647 signal peptidase I
YP_001511695.1	KEGG: cth:Cthe_0744 copper amine oxidase-like protein
YP_001511696.1	PFAM: Radical SAM domain protein; KEGG: cbo:CBO1067 cofactor modifying protein
YP_001511697.1	PFAM: isochorismatase hydrolase; KEGG: swo:Swol_1215 isochorismatase family protein
YP_001511698.1	PFAM: protein of unknown function DUF975; KEGG: cth:Cthe_3044 protein of unknown function DUF975
YP_001511699.1	PFAM: GCN5-related N-acetyltransferase; KEGG: amt:Amet_2950 GCN5-related N-acetyltransferase
YP_001511700.1	PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: amt:Amet_2822 ATPase AAA-2 domain protein
YP_001511701.1	KEGG: ctc:CTC00445 putative metal dependent hydrolase
YP_001511702.1	PFAM: beta-lactamase domain protein; flavodoxin/nitric oxide synthase; KEGG: cth:Cthe_1485 beta-lactamase-like protein
YP_001511703.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: amt:Amet_1556 efflux transporter, RND family, MFP subunit
YP_001511704.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: amt:Amet_1555 ABC transporter related
YP_001511705.1	PFAM: protein of unknown function DUF214; KEGG: amt:Amet_1554 protein of unknown function DUF214
YP_001511706.1	PFAM: Alkaline phosphatase; KEGG: dsy:DSY4404 hypothetical protein
YP_001511707.1	PFAM: YibE/F family protein; KEGG: dsy:DSY4405 hypothetical protein
YP_001511708.1	TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: methylguanine DNA methyltransferase ribonuclease domain protein; Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: dsy:DSY4761 hypothetical protein
YP_001511709.1	PFAM: helix-turn-helix- domain containing protein AraC type; HhH-GPD family protein; Ada metal-binding domain protein; AlkA domain protein; KEGG: hch:HCH_04648 adenosine deaminase
YP_001511710.1	PFAM: Domain of unknown function DUF1858; KEGG: tde:TDE0477 hypothetical protein
YP_001511711.1	PFAM: cobalamin synthesis protein P47K; KEGG: tde:TDE0476 hypothetical protein
YP_001511712.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tde:TDE0475 ABC transporter, ATP-binding protein
YP_001511714.1	PFAM: transposase IS3/IS911 family protein; KEGG: amt:Amet_4732 transposase IS3/IS911 family protein
YP_001511715.1	PFAM: Integrase catalytic region; KEGG: bcz:pE33L466_0288 transposase
YP_001511717.1	PFAM: cell wall hydrolase/autolysin; KEGG: bha:BH0966 N-acetylmuramoyl-L-alanine amidase (sporulation mother cell wall hydrolase)
YP_001511718.1	KEGG: cbo:CBO0746 phage related protein
YP_001511719.1	KEGG: btk:BT9727_0859 possible RNA polymerase sigma-B factor (sigma-37) (general stress protein84) (GSP84)
YP_001511722.1	PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: Animal peptidoglycan recognition protein PGRP; KEGG: dme:Dmel_CG14745 PGRP-SC2
YP_001511723.1	KEGG: amt:Amet_2147 hypothetical protein
YP_001511724.1	KEGG: amt:Amet_2148 hypothetical protein
YP_001511725.1	TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: amt:Amet_2149 RNA polymerase, sigma-24 subunit, ECF subfamily
YP_001511726.1	KEGG: cth:Cthe_3195 hypothetical protein
YP_001511727.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: cdf:CD0800 3-hydroxybutyryl-CoA dehydratase (crotonase)
YP_001511728.1	PFAM: Gluconate transporter; Citrate transporter; KEGG: cdf:CD0801 probable permease
YP_001511729.1	PFAM: coenzyme A transferase; KEGG: amt:Amet_4532 coenzyme A transferase
YP_001511730.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: cdf:CD0803 putative acyl-CoA dehydrogenase
YP_001511731.1	PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: cdf:CD0804 electron transfer flavoprotein beta-subunit
YP_001511732.1	PFAM: thiamine pyrophosphate protein central region; Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: cdf:CD0805 electron transfer flavoprotein alpha-subunit
YP_001511733.1	KEGG: cdf:CD0806 putative sigma-54-dependent transcriptional regulator; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; PAS fold domain protein; SMART: PAS domain containing protein; AAA ATPase
YP_001511734.1	KEGG: cbo:CBO0408 hypothetical protein
YP_001511735.1	PFAM: Rieske [2Fe-2S] domain protein; FAD dependent oxidoreductase; KEGG: cth:Cthe_1461 FAD dependent oxidoreductase
YP_001511736.1	KEGG: amt:Amet_3459 conserved hypothetical protein
YP_001511737.1	KEGG: cth:Cthe_1434 hypothetical protein
YP_001511738.1	catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_001511739.1	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: cno:NT01CX_0285 MATE efflux family protein
YP_001511740.1	TIGRFAM: flavocytochrome c; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: shn:Shewana3_4004 flavocytochrome c
YP_001511741.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase internal region; KEGG: ctc:CTC01848 two-component sensor kinase YesM
YP_001511742.1	PFAM: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: amt:Amet_1138 response regulator receiver protein
YP_001511743.1	PFAM: protein of unknown function DUF583; KEGG: amt:Amet_3153 protein of unknown function DUF583
YP_001511744.1	PFAM: peptidase M23B; KEGG: amt:Amet_3152 peptidase M23B
YP_001511745.1	PFAM: extracellular solute-binding protein family 3; KEGG: cbo:CBO2018 probable amino acid ABC transporter, substrate-binding protein
YP_001511746.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cbo:CBO2017 probable amino acid ABC transporter, permease protein
YP_001511747.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: chy:CHY_0506 glutamine ABC transporter, ATP-binding protein
YP_001511748.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: dsy:DSY0350 hypothetical protein
YP_001511749.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: tte:TTE0717 NtrC family transcriptional regulator, ATPase domain
YP_001511750.1	TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: cbo:CBO1101 sodium:alanine symporter
YP_001511751.1	PFAM: peptidase M20; KEGG: cac:CAC0367 arginine degradation protein (gene RocB)
YP_001511752.1	PFAM: AzlC family protein; KEGG: dsy:DSY2398 hypothetical protein
YP_001511753.1	PFAM: branched-chain amino acid transport; KEGG: bsu:BG11916 branched-chain amino acid transport protein
YP_001511755.1	PFAM: S-layer domain protein; KEGG: drm:Dred_3091 Ig family protein
YP_001511756.1	PFAM: S-layer domain protein; KEGG: swo:Swol_1189 hypothetical protein
YP_001511757.1	PFAM: transport system permease protein; KEGG: swo:Swol_1473 iron(III) ABC transporter, permease protein
YP_001511758.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: swo:Swol_1472 iron(III) ABC transporter, ATP-binding protein
YP_001511759.1	PFAM: periplasmic binding protein; KEGG: swo:Swol_2486 ferrichrome-binding periplasmic protein
YP_001511760.1	KEGG: swo:Swol_2485 hypothetical protein
YP_001511761.1	PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: tte:TTE2001 predicted dehydrogenase
YP_001511762.1	PFAM: protein of unknown function DUF534; KEGG: dsy:DSY0544 hypothetical protein
YP_001511763.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: chy:CHY_1856 sensor histidine kinase
YP_001511764.1	PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: chy:CHY_1855 sigma-54 dependent transcriptional regulator/response regulator
YP_001511765.1	Contains selenocysteine; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: dsy:DSY0547 putative anaerobic dehydrogenase
YP_001511766.1	KEGG: dsy:DSY4905 hypothetical protein
YP_001511767.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dsy:DSY4904 putative oxidoreductase iron-sulfur subunit
YP_001511768.1	KEGG: amt:Amet_0989 molybdopterin-guanine dinucleotide biosynthesis protein A-like protein
YP_001511769.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: amt:Amet_0993 4Fe-4S ferredoxin, iron-sulfur binding domain protein
YP_001511770.1	TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: amt:Amet_0996 molybdenum cofactor synthesis domain
YP_001511771.1	TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: amt:Amet_0997 molybdopterin-guanine dinucleotide biosynthesis protein B
YP_001511772.1	KEGG: mta:Moth_1420 hypothetical protein
YP_001511773.1	PFAM: transport system permease protein; ABC-3 protein; KEGG: mta:Moth_1424 transport system permease protein
YP_001511774.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mac:MA1198 iron ABC transporter, ATP-binding protein
YP_001511775.1	PFAM: periplasmic binding protein; KEGG: swo:Swol_1691 periplasmic binding protein
YP_001511776.1	KEGG: dsy:DSY1136 hypothetical protein
YP_001511777.1	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mja:MJ0785 biotin synthetase
YP_001511778.1	PFAM: periplasmic binding protein; KEGG: mac:MA1232 iron(III) ABC transporter, solute-binding protein
YP_001511779.1	TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: dsy:DSY3835 hypothetical protein
YP_001511780.1	PFAM: periplasmic binding protein; KEGG: swo:Swol_2097 periplasmic binding protein
YP_001511781.1	KEGG: swo:Swol_2095 hypothetical protein
YP_001511782.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: swo:Swol_2094 ABC transporter, ATP-binding protein
YP_001511783.1	KEGG: swo:Swol_2096 ABC-type Fe3+ transport system periplasmic component-like protein
YP_001511784.1	KEGG: cbo:CBO3316 hypothetical protein
YP_001511786.1	TIGRFAM: arginase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: amt:Amet_4424 arginase
YP_001511787.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: amt:Amet_1709 PpiC-type peptidyl-prolyl cis-trans isomerase
YP_001511788.1	TIGRFAM: oligoendopeptidase, pepF/M3 family; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; Oligopeptidase F; KEGG: amt:Amet_1063 oligoendopeptidase, PepF/M3 family
YP_001511789.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cbo:CBO0365 two-component response regulator
YP_001511790.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bca:BCE_0295 sensor histidine kinase
YP_001511791.1	catalyzes the formation of asparagine from aspartate and ammonia
YP_001511792.1	PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: amt:Amet_4658 ABC transporter, transmembrane region
YP_001511793.1	PFAM: helix-turn-helix domain protein; KEGG: tte:TTE2455 TPR-repeat-containing proteins
YP_001511794.1	PFAM: Accessory gene regulator B; KEGG: mta:Moth_1580 accessory gene regulator B
YP_001511795.1	PFAM: ATP-binding region ATPase domain protein; Motilin/ghrelin domain protein; KEGG: tte:TTE0562 sensory transduction histidine kinases
YP_001511796.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: amt:Amet_4657 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein
YP_001511797.1	PFAM: phospholipase D/Transphosphatidylase; KEGG: amt:Amet_4655 phospholipase D/transphosphatidylase
YP_001511798.1	PFAM: Desulfoferrodoxin ferrous iron-binding region; KEGG: amt:Amet_4653 desulfoferrodoxin, ferrous iron-binding region
YP_001511799.1	TIGRFAM: putative proton-coupled thiamine transporter YuaJ; PFAM: thiamine transporter YuaJ; KEGG: amt:Amet_4652 putative proton-coupled thiamine transporter YuaJ
YP_001511800.1	PFAM: histidine kinase HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: amt:Amet_2943 methyl-accepting chemotaxis sensory transducer
YP_001511801.1	PFAM: SEC-C motif domain protein; KEGG: amt:Amet_4650 sec-C motif domain protein
YP_001511802.1	PFAM: dUTPase; KEGG: bha:BH3133 hypothetical protein
YP_001511803.1	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; virulence factor MVIN family protein; KEGG: pab:PAB1438 DNA damage-inducimle protein
YP_001511804.1	PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: amt:Amet_4646 nitrate reductase
YP_001511805.1	KEGG: amt:Amet_4641 metallophosphoesterase, calcineurin superfamily
YP_001511806.1	KEGG: amt:Amet_4640 hypothetical protein
YP_001511807.1	PFAM: nitroreductase; KEGG: amt:Amet_4639 nitroreductase
YP_001511808.1	PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: cdf:CD0720 FolD bifunctional protein
YP_001511809.1	PFAM: histidine kinase HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: amt:Amet_4638 methyl-accepting chemotaxis sensory transducer
YP_001511810.1	KEGG: amt:Amet_4637 hypothetical protein
YP_001511811.1	PFAM: glutamate--cysteine ligase GCS2; KEGG: amt:Amet_4636 glutamate--cysteine ligase
YP_001511812.1	KEGG: amt:Amet_4635 conserved hypothetical protein
YP_001511813.1	KEGG: amt:Amet_4321 sporulation protein YtaF
YP_001511814.1	TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; KEGG: oih:OB0443 hypothetical conserved protein
YP_001511815.1	PFAM: protein of unknown function UPF0118; KEGG: amt:Amet_4632 protein of unknown function UPF0118
YP_001511816.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: amt:Amet_4631 3-oxoacyl-(acyl-carrier-protein) reductase
YP_001511817.1	KEGG: amt:Amet_4630 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase
YP_001511818.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: amt:Amet_4626 protein of unknown function DUF6, transmembrane
YP_001511819.1	PFAM: Glycosyltransferase 28 domain; Monogalactosyldiacylglycerol synthase; KEGG: csc:Csac_2337 monogalactosyldiacylglycerol synthase
YP_001511820.1	PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: cbo:CBO1522 C4-dicarboxylate/malic acid transport protein
YP_001511821.1	PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: ctc:CTC02474 carbon monoxide dehydrogenase, small subunit
YP_001511822.1	PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: ctc:CTC02475 putative carbon-monoxide dehydrogenase, middle subunit
YP_001511823.1	PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: ctc:CTC02477 putative carbon-monoxide dehydrogenase, large subunit
YP_001511824.1	PFAM: histidine kinase HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: tte:TTE2231 methyl-accepting chemotaxis protein
YP_001511825.1	TIGRFAM: phosphate binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: drm:Dred_2106 phosphate binding protein
YP_001511826.1	TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_1611 phosphate ABC transporter, inner membrane subunit PstC
YP_001511827.1	TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vpa:VPA1459 phosphate ABC transporter, permease protein
YP_001511828.1	KEGG: amt:Amet_4621 phosphate ABC transporter, ATPase subunit; TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase
YP_001511829.1	TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: amt:Amet_4620 phosphate uptake regulator, PhoU
YP_001511830.1	KEGG: cac:CAC3379 uncharacterized protein, YQFW B.subtilis homolog
YP_001511831.1	PFAM: helix-turn-helix domain protein; KEGG: cbo:CBO1403 regulatory protein
YP_001511832.1	PFAM: FMN-binding domain protein; KEGG: amt:Amet_4619 FMN-binding domain protein
YP_001511833.1	PFAM: Na+/H+ antiporter NhaC; KEGG: amt:Amet_4617 Na+/H+ antiporter NhaC
YP_001511834.1	PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: amt:Amet_3094 NADH dehydrogenase (ubiquinone), 24 kDa subunit
YP_001511835.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: csc:Csac_0620 NADH dehydrogenase (quinone)
YP_001511836.1	PFAM: ferredoxin; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; KEGG: amt:Amet_3096 molybdopterin oxidoreductase
YP_001511837.1	catalyzes the removal of N-terminal amino acids preferably leucine from various peptides
YP_001511838.1	KEGG: amt:Amet_4614 hypothetical protein
YP_001511839.1	KEGG: amt:Amet_4613 conserved hypothetical protein
YP_001511840.1	TIGRFAM: SpoIID/LytB domain; PFAM: cell wall hydrolase/autolysin; KEGG: amt:Amet_4611 SpoIID/LytB domain protein
YP_001511841.1	PFAM: protein of unknown function DUF1021; KEGG: amt:Amet_4610 protein of unknown function DUF1021
YP_001511842.1	PFAM: Excinuclease ABC C subunit domain protein; KEGG: cpf:CPF_1697 GIY-YIG domain protein
YP_001511843.1	PFAM: Peptidoglycan-binding LysM; KEGG: amt:Amet_4605 peptidoglycan-binding LysM
YP_001511844.1	An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis
YP_001511845.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: amt:Amet_4603 transcriptional regulator, GntR family
YP_001511846.1	KEGG: amt:Amet_4602 conserved hypothetical protein
YP_001511847.1	PFAM: GerA spore germination protein; KEGG: amt:Amet_4600 GerA spore germination protein
YP_001511848.1	TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: amt:Amet_4598 spore germination protein
YP_001511849.1	PFAM: spore germination B3 GerAC family protein; KEGG: amt:Amet_4599 spore germination B3 GerAC family protein
YP_001511850.1	TIGRFAM: Sporulation stage II protein R; KEGG: amt:Amet_4592 sporulation stage II, protein R
YP_001511851.1	TIGRFAM: D-alanine--D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein; RimK domain protein ATP-grasp; KEGG: amt:Amet_4591 D-alanine--D-alanine ligase
YP_001511852.1	PFAM: Domain of unknown function DUF1934; KEGG: amt:Amet_4590 domain of unknown function DUF1934
YP_001511853.1	PFAM: Formiminotransferase-cyclodeaminase; KEGG: amt:Amet_4589 formiminotransferase-cyclodeaminase
YP_001511854.1	PFAM: purine catabolism PurC domain protein; KEGG: amt:Amet_4588 transcriptional regulator, CdaR
YP_001511855.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: amt:Amet_4328 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
YP_001511856.1	KEGG: sfu:Sfum_0958 ATP-grasp enzyme-like
YP_001511857.1	TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: amt:Amet_1618 UDP-N-acetylmuramyl-tripeptide synthetase
YP_001511858.1	catalyzes the release of the N-terminal amino acid from a tripeptide
YP_001511859.1	PFAM: copper amine oxidase domain protein; SCP-like extracellular; KEGG: cth:Cthe_0779 copper amine oxidase-like protein
YP_001511860.1	PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: amt:Amet_3731 PHP C-terminal domain protein
YP_001511861.1	KEGG: sat:SYN_00365 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
YP_001511862.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sat:SYN_00366 sulfate transport system permease protein
YP_001511863.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sat:SYN_00367 sulfate transport ATP-binding protein
YP_001511864.1	PFAM: protein of unknown function UPF0153; KEGG: rrs:RoseRS_2875 protein of unknown function UPF0153
YP_001511865.1	KEGG: amt:Amet_3733 hypothetical protein
YP_001511866.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: amt:Amet_4675 helix-turn-helix-domain containing protein, AraC type
YP_001511867.1	KEGG: tde:TDE1177 flavodoxin family protein
YP_001511868.1	PFAM: NifH/frxC-family protein; KEGG: cbo:CBO0690 nitrogenase iron protein
YP_001511869.1	PFAM: periplasmic binding protein; KEGG: bce:BC4546 ferrichrome-binding protein
YP_001511870.1	PFAM: transport system permease protein; KEGG: ctc:CTC01196 putative ferrichrome ABC transporter
YP_001511871.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cno:NT01CX_1448 ferric enterobactin transport ATP-binding protein FepC
YP_001511872.1	PFAM: oxidoreductase/nitrogenase component 1; KEGG: cbo:CBO0691 nitrogenase iron-molybdenum cofactor biosynthesis protein
YP_001511873.1	PFAM: oxidoreductase/nitrogenase component 1; KEGG: cbo:CBO0692 nitrogenase iron-molybdenum cofactor biosynthesis protein NifE
YP_001511874.1	PFAM: spore germination B3 GerAC family protein; KEGG: amt:Amet_0512 spore germination B3 GerAC family protein
YP_001511875.1	TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: amt:Amet_0513 spore germination protein
YP_001511876.1	PFAM: GerA spore germination protein; KEGG: amt:Amet_0514 GerA spore germination protein
YP_001511877.1	PFAM: periplasmic binding protein; KEGG: dsy:DSY3874 hypothetical protein
YP_001511878.1	PFAM: transport system permease protein; inner-membrane translocator; KEGG: dsy:DSY3873 hypothetical protein
YP_001511879.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ctc:CTC01197 ferric enterobactin transport ATP-binding protein fepC
YP_001511880.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pth:PTH_1476 ABC-type multidrug transport system, ATPase component
YP_001511881.1	PFAM: ABC-2 type transporter; KEGG: pth:PTH_1475 ABC-type multidrug transport system, permease component
YP_001511882.1	PFAM: anaerobic cobalt chelatase; KEGG: cdf:CD3422 sirohydrochlorin cobaltochelatase
YP_001511883.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: swo:Swol_2177 response regulator receiver protein
YP_001511884.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: swo:Swol_2176 hypothetical protein
YP_001511885.1	catalyzes the formation of methylglyoxal from glycerone phosphate
YP_001511886.1	KEGG: amt:Amet_2939 hypothetical protein
YP_001511887.1	TIGRFAM: metal dependent phophohydrolase; KEGG: amt:Amet_3102 metal dependent phosphohydrolase
YP_001511889.1	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: ctc:CTC00443 Na+ driven multidrug efflux pump
YP_001511890.1	KEGG: cdf:CD1748 hypothetical protein
YP_001511891.1	TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: cbe:Cbei_4356 cysteine synthase A
YP_001511892.1	KEGG: tde:TDE2485 hypothetical protein
YP_001511893.1	KEGG: tde:TDE2484 hypothetical protein
YP_001511894.1	PFAM: protein of unknown function DUF477; KEGG: bha:BH1807 hypothetical protein
YP_001511895.1	KEGG: cbe:Cbei_0552 apurinic endonuclease Apn1; TIGRFAM: apurinic endonuclease Apn1; PFAM: Xylose isomerase domain protein TIM barrel; SMART: AP endonuclease family 2
YP_001511896.1	KEGG: amt:Amet_2102 hypothetical protein
YP_001511897.1	KEGG: tte:TTE2610 histidinol phosphatase and related hydrolases of the PHP family
YP_001511898.1	KEGG: mac:MA2899 hypothetical protein
YP_001511899.1	PFAM: GCN5-related N-acetyltransferase; KEGG: amt:Amet_3366 GCN5-related N-acetyltransferase
YP_001511900.1	PFAM: isochorismatase hydrolase; KEGG: rci:RCIX623 hydrolase (isochorismatase family)
YP_001511901.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: amt:Amet_2262 HAD-superfamily hydrolase, subfamily IB (PSPase-like)
YP_001511902.1	PFAM: Streptomycin adenylyltransferase; KEGG: bha:BH0322 aminoglycoside 6-adenylyltransferase
YP_001511906.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bld:BLi01189 YitI
YP_001511907.1	PFAM: peptidase U61 LD-carboxypeptidase A; KEGG: btl:BALH_2911 possible microcin C7 self-immunity protein
YP_001511908.1	TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: bsu:BG11573 RNA polymerase ECF-type sigma factor
YP_001511909.1	KEGG: dsy:DSY1733 hypothetical protein
YP_001511910.1	PFAM: GCN5-related N-acetyltransferase; KEGG: cac:CAC3374 predicted acetyltransferase
YP_001511911.1	PFAM: protein of unknown function DUF6 transmembrane; Protein of unknown function DUF250; KEGG: ter:Tery_2183 protein of unknown function DUF6, transmembrane
YP_001511912.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: dsy:DSY3380 hypothetical protein
YP_001511913.1	PFAM: beta-lactamase domain protein; KEGG: ctc:CTC01895 metal dependent hydrolase
YP_001511914.1	KEGG: fjo:Fjoh_1869 hypothetical protein
YP_001511915.1	KEGG: cdf:CD1728 hypothetical protein
YP_001511916.1	PFAM: Excinuclease ABC C subunit domain protein; KEGG: dsy:DSY1229 hypothetical protein
YP_001511917.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: cac:CAC0196 NADH-dependent flavine oxidoreductase
YP_001511918.1	PFAM: cyclase family protein; KEGG: chy:CHY_0702 putative cyclase
YP_001511919.1	KEGG: chy:CHY_0695 glutamate formiminotransferase; TIGRFAM: glutamate formiminotransferase; PFAM: Formiminotransferase domain protein
YP_001511920.1	KEGG: chy:CHY_0678 allantoinase; TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase
YP_001511921.1	PFAM: isochorismatase hydrolase; KEGG: chy:CHY_0679 isochorismatase family protein
YP_001511922.1	TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; KEGG: chy:CHY_0680 putative 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
YP_001511923.1	TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein; KEGG: chy:CHY_0681 3-octaprenyl-4-hydroxybenzoate carboxy-lyase family protein
YP_001511924.1	PFAM: microcompartments protein; KEGG: lre:Lreu_1741 microcompartments protein
YP_001511926.1	PFAM: microcompartments protein; KEGG: chy:CHY_0684 bacterial microcompartments family protein
YP_001511927.1	PFAM: microcompartments protein; KEGG: amt:Amet_4577 microcompartments protein
YP_001511929.1	PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; KEGG: amt:Amet_4575 ethanolamine utilization protein EutN/carboxysome structural protein CcmL
YP_001511930.1	KEGG: amt:Amet_4574 adenine deaminase; TIGRFAM: adenine deaminase; PFAM: amidohydrolase; Amidohydrolase 3
YP_001511931.1	PFAM: Xanthine/uracil/vitamin C permease; KEGG: amt:Amet_4573 xanthine/uracil/vitamin C permease
YP_001511932.1	Catalyzes the hydrolytic cleavage of a carbon-halogen bond in N-ethylammeline
YP_001511933.1	PFAM: molybdopterin dehydrogenase FAD-binding; FAD linked oxidase domain protein; KEGG: amt:Amet_4571 molybdopterin dehydrogenase, FAD-binding
YP_001511934.1	PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: amt:Amet_4570 (2Fe-2S)-binding domain protein
YP_001511935.1	PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: amt:Amet_4569 aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead
YP_001511936.1	KEGG: amt:Amet_4568 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding
YP_001511937.1	TIGRFAM: adenine deaminase; PFAM: amidohydrolase; KEGG: cac:CAC0887 adenine deaminase
YP_001511938.1	KEGG: dsy:DSY0867 hypothetical protein
YP_001511939.1	KEGG: cbo:CBO2891 hypothetical protein
YP_001511940.1	S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine
YP_001511941.1	PFAM: aminotransferase class V; Orn/Lys/Arg decarboxylase major region; aromatic amino acid beta-eliminating lyase/threonine aldolase; Orn/Lys/Arg decarboxylase domain protein; KEGG: dsy:DSY0236 hypothetical protein
YP_001511942.1	catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine
YP_001511943.1	PFAM: chemotaxis sensory transducer; KEGG: ctc:CTC01155 methyl-accepting chemotaxis protein
YP_001511944.1	KEGG: tte:TTE1604 acyl-CoA hydrolase
YP_001511945.1	KEGG: tde:TDE2679 hypothetical protein
YP_001511946.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bcl:ABC3641 two-component response regulator
YP_001511947.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: cph:Cpha266_1787 PAS/PAC sensor hybrid histidine kinase
YP_001511948.1	KEGG: fnu:FN0050 fumarate reductase flavoprotein subunit; TIGRFAM: flavocytochrome c; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FMN-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_001511949.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: cac:CAC3229 NADH:flavin oxidoreductase, Old Yellow enzyme family
YP_001511950.1	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: cdf:CD3520 putative cation efflux protein
YP_001511951.1	KEGG: cbo:CBO2919 tryptophan transport protein
YP_001511952.1	TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: cac:CAC3572 biotin carboxyl carrier protein of acetyl-CoA carboxylase
YP_001511953.1	TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; RimK domain protein ATP-grasp; KEGG: cbo:CBO3596 biotin carboxylase
YP_001511954.1	TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; KEGG: drm:Dred_2315 acetyl-CoA carboxylase, carboxyl transferase, beta subunit
YP_001511955.1	KEGG: bha:BH3165 acetyl-CoA carboxylase carboxyl transferase subunit alpha; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: acetyl-CoA carboxylase alpha subunit
YP_001511956.1	PFAM: Rhodanese domain protein; KEGG: oih:OB0532 thiosulfate sulfurtransferase
YP_001511957.1	TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein; KEGG: ctc:CTC00586 hemolysin III
YP_001511958.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: ade:Adeh_1435 protein of unknown function DUF6, transmembrane
YP_001511959.1	PFAM: peptidase U61 LD-carboxypeptidase A; KEGG: bld:BLi01397 YkfA
YP_001511960.1	KEGG: tte:TTE0596 metal-dependent amidase/aminoacylase/carboxypeptidase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein
YP_001511961.1	PFAM: Formiminotransferase-cyclodeaminase; KEGG: ctc:CTC02303 formiminotetrahydrofolate cyclodeaminase
YP_001511962.1	KEGG: dsy:DSY0802 hypothetical protein
YP_001511963.1	PFAM: aminotransferase class V; KEGG: cbo:CBO0362 aminotransferase
YP_001511964.1	TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; KEGG: gsu:GSU2929 hypothetical protein
YP_001511965.1	catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids
YP_001511966.1	PFAM: glycoside hydrolase family 18; Peptidoglycan-binding LysM; SMART: chitinase II; KEGG: cac:CAC2747 protein containing LysM repeats (N-terminal domain) and domain related to chitinase
YP_001511967.1	KEGG: mta:Moth_0522 hypothetical protein
YP_001511968.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; CBS domain containing protein; KEGG: drm:Dred_1016 diguanylate cyclase
YP_001511969.1	PFAM: putative RNA methylase; THUMP domain protein; KEGG: drm:Dred_2939 putative RNA methylase
YP_001511970.1	KEGG: bsu:BG12731 hypothetical protein
YP_001511972.1	PFAM: NADPH-dependent FMN reductase; KEGG: oih:OB1038 chromate reductase
YP_001511973.1	PFAM: metallophosphoesterase; KEGG: bce:BC2476 phosphoesterase
YP_001511974.1	KEGG: tte:TTE0717 NtrC family transcriptional regulator, ATPase domain; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; AAA ATPase
YP_001511975.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: pgi:PG1069 alcohol dehydrogenase, zinc-containing, putative
YP_001511976.1	KEGG: fnu:FN1866 lysine 2,3-aminomutase; TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein
YP_001511977.1	KEGG: tte:TTE0724 hypothetical protein
YP_001511978.1	PFAM: DNA mismatch repair protein MutS domain protein; KEGG: tte:TTE0725 MutS-like ATPase involved in mismatch repair, family 2
YP_001511979.1	PFAM: D-Lysine 56-aminomutase alpha subunit; KEGG: tte:TTE0726 D-lysine 5,6-aminomutase alpha subunit
YP_001511980.1	PFAM: cobalamin B12-binding domain protein; KEGG: pgi:PG1074 D-lysine 5,6-aminomutase, beta subunit
YP_001511982.1	KEGG: tte:TTE2363 hypothetical protein
YP_001511983.1	KEGG: tte:TTE2362 hypothetical protein
YP_001511984.1	PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: cdf:CD1089 two-component response regulator
YP_001511985.1	PFAM: ATP-binding region ATPase domain protein; KEGG: cbo:CBO1052 two-component sensor kinase
YP_001511986.1	PFAM: Accessory gene regulator B; KEGG: cth:Cthe_1310 accessory gene regulator B
YP_001511987.1	KEGG: bha:BH0079 hypothetical protein
YP_001511988.1	SMART: serine/threonine protein kinase; KEGG: bsu:BG10129 probable serine/threonine-protein kinase
YP_001511989.1	TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: ExsB family protein; PP-loop domain protein; Protein of unkown function DUF1946 PP-loop ATpase; KEGG: cdf:CD3560 putative ATPase
YP_001511990.1	KEGG: cdf:CD3559 cell division protein; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_001511991.1	TIGRFAM: YidE/YbjL duplication; PFAM: YidE/YbjL duplication domain protein; KEGG: cdf:CD2344 hypothetical protein
YP_001511992.1	KEGG: gtn:GTNG_3178 hypothetical protein
YP_001511993.1	PFAM: acetyl-CoA hydrolase/transferase; KEGG: cdf:CD2343 succinyl-CoA:coenzyme A transferase
YP_001511994.1	KEGG: tte:TTE1217 Methylmalonyl-CoA mutase, N-terminal domain/subunit; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase
YP_001511995.1	PFAM: cobalamin B12-binding domain protein; KEGG: tte:TTE2388 methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding)
YP_001511996.1	KEGG: tte:TTE2387 putative periplasmic protein kinase ArgK and related GTPases of G3E family; TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein; SMART: AAA ATPase
YP_001511997.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pth:PTH_1363 methylmalonyl-CoA epimerase
YP_001511998.1	PFAM: carboxyl transferase; KEGG: tte:TTE2385 Acetyl-CoA carboxylase alpha subunit
YP_001511999.1	TIGRFAM: sodium pump decarboxylase, gamma subunit; PFAM: sodium pump decarboxylase gamma subunit
YP_001512000.1	PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: cth:Cthe_0700 biotin/lipoyl attachment protein
YP_001512001.1	KEGG: csc:Csac_2482 sodium ion-translocating decarboxylase, beta subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; PFAM: Na+transporting methylmalonyl-CoA/oxaloacetate decarboxylase beta subunit
YP_001512002.1	KEGG: cno:NT01CX_0898 BirA bifunctional protein, putative; TIGRFAM: biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; Helix-turn-helix type 11 domain protein
YP_001512003.1	KEGG: tte:TTE2382 membrane protein
YP_001512004.1	type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP
YP_001512005.1	TIGRFAM: putative TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; dihydroorotate dehydrogenase; KEGG: cdf:CD3554 tRNA-dihydrouridine synthase
YP_001512006.1	KEGG: tte:TTE2375 hypothetical protein
YP_001512007.1	necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
YP_001512008.1	TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: cdf:CD3552 lysyl-tRNA synthetase
YP_001512009.1	KEGG: tte:TTE2338 hypothetical protein
YP_001512010.1	KEGG: rrs:RoseRS_4577 ribonucleoside-triphosphate reductase; TIGRFAM: ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent; PFAM: ATP-cone domain protein
YP_001512011.1	TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; KEGG: tte:TTE2333 translation elongation and release factors (GTPases)
YP_001512012.1	PFAM: UvrB/UvrC protein; KEGG: mta:Moth_0160 UvrB/UvrC protein
YP_001512013.1	PFAM: ATP:guanido phosphotransferase; KEGG: gka:GK0077 creatine kinase
YP_001512014.1	PFAM: UvrB/UvrC protein; AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: tte:TTE2327 ATPases with chaperone activity, ATP-binding subunit
YP_001512015.1	Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents
YP_001512016.1	non-specific DNA-binding; scans chromosomes during sporulation for DNA-damage; delays initiation of sporulation; participates in a checkpoint signaling cascade for cell-cycle progression and DNA repair
YP_001512017.1	KEGG: tte:TTE2324 hypothetical protein
YP_001512018.1	PFAM: transcription factor CarD; KEGG: drm:Dred_0185 transcriptional regulator, CarD family
YP_001512019.1	PFAM: PilT protein domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: Nucleotide binding protein PINc; KEGG: cdf:CD0029 hypothetical protein
YP_001512020.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; nitrite and sulphite reductase 4Fe-4S region; Proto-chlorophyllide reductase 57 kD subunit; KEGG: ctc:CTC01213 anaerobic sulfite reductase subunit C
YP_001512021.1	4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers
YP_001512022.1	KEGG: cpf:CPF_2616 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: MECDP-synthase
YP_001512023.1	catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro)
YP_001512024.1	PFAM: protein of unknown function DUF1002; KEGG: tte:TTE1117 hypothetical protein
YP_001512025.1	Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation
YP_001512026.1	TIGRFAM: serine O-acetyltransferase; KEGG: tte:TTE2316 serine acetyltransferase
YP_001512027.1	catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA
YP_001512028.1	PFAM: ribonuclease III; KEGG: cdf:CD0053 hypothetical protein
YP_001512030.1	flavin dependent thymidylate synthase; ThyX; thymidylate synthase complementing protein; catalyzes the formation of dTMP and tetrahydrofolate from dUMP and methylenetetrahydrofolate; the enzyme from Mycobacterium tuberculosis forms homotetramers; uses FAD as a cofactor
YP_001512031.1	TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: cdf:CD0055 putative tRNA/rRNA methyltransferase
YP_001512032.1	PFAM: protein of unknown function DUF901; KEGG: cdf:CD0056 hypothetical protein
YP_001512033.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
YP_001512034.1	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu
YP_001512035.1	PFAM: ribosomal protein L33; KEGG: cpr:CPR_2415 ribosomal protein L33
YP_001512036.1	TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; KEGG: drm:Dred_0201 preprotein translocase, SecE subunit
YP_001512037.1	KEGG: cno:NT01CX_1102 transcription termination/antitermination factor NusG; TIGRFAM: transcription termination/antitermination factor NusG; PFAM: transcription antitermination protein NusG; KOW domain protein; SMART: NGN domain protein; KOW (Kyrpides Ouzounis Woese) domain protein
YP_001512038.1	binds directly to 23S ribosomal RNA
YP_001512039.1	in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA
YP_001512040.1	binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit
YP_001512041.1	present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors
YP_001512042.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme
YP_001512043.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter
YP_001512044.1	KEGG: cth:Cthe_2726 ribosomal protein L7Ae/L30e/S12e/Gadd45
YP_001512045.1	interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance
YP_001512046.1	binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit
YP_001512047.1	EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene
YP_001512048.1	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu
YP_001512049.1	NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex
YP_001512050.1	binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin
YP_001512051.1	L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA
YP_001512052.1	binds third domain of 23S rRNA and protein L29; part of exit tunnel
YP_001512053.1	one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation
YP_001512054.1	protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
YP_001512055.1	binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center
YP_001512056.1	KEGG: cth:Cthe_2909 ribosomal protein S3; TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; KH type 2 domain protein; Ribosomal protein S3 domain; SMART: KH domain protein
YP_001512057.1	located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e
YP_001512058.1	one of the stabilizing components for the large ribosomal subunit
YP_001512059.1	primary binding protein; helps mediate assembly; involved in translation fidelity
YP_001512060.1	binds to the 23S rRNA between the centers for peptidyl transferase and GTPase
YP_001512061.1	assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel
YP_001512062.1	part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13
YP_001512063.1	located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif
YP_001512064.1	binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
YP_001512065.1	ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance
YP_001512066.1	binds 5S rRNA along with protein L5 and L25
YP_001512067.1	located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance
YP_001512068.1	L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7
YP_001512069.1	late assembly protein
YP_001512070.1	TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein; KEGG: tte:TTE2272 preprotein translocase subunit SecY
YP_001512071.1	essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP
YP_001512072.1	TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: cdf:CD0092 methionine aminopeptidase
YP_001512073.1	KEGG: tte:TTE2269 hypothetical protein
YP_001512074.1	TIGRFAM: translation initiation factor IF-1; PFAM: RNA binding S1 domain protein; S1 IF1 family protein; KEGG: cth:Cthe_2927 translation initiation factor IF-1
YP_001512075.1	PFAM: ribosomal protein L36; KEGG: cpr:CPR_2374 ribosomal protein L36
YP_001512076.1	located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA
YP_001512077.1	located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3
YP_001512078.1	primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination
YP_001512079.1	catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme
YP_001512080.1	is a component of the macrolide binding site in the peptidyl transferase center
YP_001512081.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: amt:Amet_4447 ABC transporter related
YP_001512082.1	with CbiNQ forms the ABC transporter for cobalt import; Clostridia have two adjacent copies of this gene
YP_001512083.1	PFAM: cobalt transport protein; KEGG: amt:Amet_4445 cobalt transport protein
YP_001512084.1	KEGG: amt:Amet_4444 tRNA pseudouridine synthase A; TIGRFAM: tRNA pseudouridine synthase A; PFAM: tRNA pseudouridine synthase
YP_001512085.1	in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit
YP_001512086.1	forms a direct contact with the tRNA during translation
YP_001512088.1	TIGRFAM: N-acetylmuramoyl-L-alanine amidase CwlD; PFAM: cell wall hydrolase/autolysin; KEGG: cdf:CD0106 germination-specific N-acetylmuramoyl-L-alanine amidase
YP_001512089.1	KEGG: cbo:CBO1315 membrane protein
YP_001512090.1	KEGG: pth:PTH_0587 ATPase involved in chromosome partitioning
YP_001512091.1	KEGG: csc:Csac_1713 inosine-5'-monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: CBS domain containing protein; IMP dehydrogenase/GMP reductase
YP_001512092.1	TIGRFAM: GMP synthase, large subunit; PFAM: GMP synthase domain protein; KEGG: ctc:CTC02409 bifunctional GMP synthase/glutamine amidotransferase protein
YP_001512093.1	PFAM: Xanthine/uracil/vitamin C permease; KEGG: cbo:CBO2901 purine transporter
YP_001512094.1	KEGG: tma:TM0447 phosphoribosylaminoimidazole carboxylase ATPase subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase subunit; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp
YP_001512095.1	KEGG: pfu:PF0427 phosphoribosylaminoimidazole carboxylase catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase
YP_001512096.1	TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase; KEGG: cth:Cthe_1249 amidophosphoribosyltransferase
YP_001512097.1	catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis
YP_001512098.1	TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; KEGG: cpr:CPR_0674 phosphoribosylglycinamide formyltransferase
YP_001512099.1	involved in de novo purine biosynthesis
YP_001512100.1	catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis
YP_001512101.1	PFAM: chemotaxis sensory transducer; KEGG: tte:TTE0646 methyl-accepting chemotaxis protein
YP_001512102.1	PFAM: NLPA lipoprotein; KEGG: dsy:DSY3920 hypothetical protein
YP_001512103.1	catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; diaminopimelate sensitive
YP_001512104.1	PFAM: sodium:dicarboxylate symporter; KEGG: ctc:CTC00822 proton/sodium-glutamate symport protein
YP_001512105.1	TIGRFAM: aspartate racemase; PFAM: Asp/Glu racemase; KEGG: pho:PH0670 aspartate racemase
YP_001512106.1	PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: mta:Moth_1278 twin-arginine translocation protein, TatA/E family
YP_001512107.1	TIGRFAM: ATP-dependent DNA helicase PcrA; PFAM: UvrD/REP helicase; KEGG: tte:TTE0604 Superfamily I DNA and RNA helicases
YP_001512108.1	this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB
YP_001512109.1	TIGRFAM: integral membrane protein TIGR01906; PFAM: Integral membrane protein 1906; KEGG: tte:TTE1993 hypothetical protein
YP_001512110.1	KEGG: cdf:CD2720 hypothetical protein
YP_001512111.1	PFAM: AIR synthase related protein domain protein; KEGG: cth:Cthe_1060 AIR synthase related protein-like protein
YP_001512112.1	PFAM: cell wall hydrolase/autolysin; copper amine oxidase domain protein; KEGG: cth:Cthe_0185 cell wall hydrolase/autolysin
YP_001512113.1	KEGG: drm:Dred_2514 hypothetical protein
YP_001512114.1	KEGG: cth:Cthe_0187 hypothetical protein
YP_001512115.1	KEGG: cdf:CD3308 ribonuclease Ph; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease
YP_001512116.1	TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein; KEGG: cdf:CD3308 ribonuclease Ph
YP_001512117.1	TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; KEGG: cdf:CD3307 putative phosphoesterase
YP_001512118.1	PFAM: Transglycosylase-associated protein; KEGG: mxa:MXAN_4946 hypothetical protein
YP_001512120.1	PFAM: protein of unknown function DUF159; KEGG: csc:Csac_0196 protein of unknown function DUF159
YP_001512121.1	PFAM: cyclase family protein; KEGG: cch:Cag_1936 hypothetical protein
YP_001512122.1	PFAM: band 7 protein; KEGG: cdf:CD3228 hypothetical protein
YP_001512123.1	KEGG: spr:spr1942 hypothetical protein
YP_001512125.1	KEGG: fnu:FN1277 aminoacyl-histidine dipeptidase; TIGRFAM: aminoacyl-histidine dipeptidase; PFAM: peptidase M20; peptidase dimerisation domain protein
YP_001512126.1	PFAM: metal-dependent phosphohydrolase HD sub domain; Metal-dependent hydrolase HDOD; KEGG: gsu:GSU0294 HD domain protein
YP_001512127.1	involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth
YP_001512128.1	KEGG: dsy:DSY3488 hypothetical protein; TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM domain protein; molybdenum cofactor synthesis domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_001512129.1	KEGG: cdf:CD1715 putative molybdenum cofactor sulfurase
YP_001512130.1	PFAM: extracellular solute-binding protein family 1; KEGG: tte:TTE1917 sugar-binding periplasmic proteins/domains
YP_001512131.1	catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis
YP_001512132.1	PFAM: conserved hypothetical protein; KEGG: cbo:CBO3377 ATPase
YP_001512133.1	PFAM: protein of unknown function UPF0052 and CofD; KEGG: ctc:CTC02494 transporter
YP_001512134.1	TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: sth:STH226 uracil permease
YP_001512135.1	PFAM: NUDIX hydrolase; KEGG: cdf:CD3398 putative DNA repair protein (nucleotide pyrophosphatase)
YP_001512136.1	PFAM: protein of unknown function DUF199; KEGG: tte:TTE1821 hypothetical protein
YP_001512137.1	catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism
YP_001512138.1	KEGG: bth:BT_2693 formiminotransferase-cyclodeaminase; TIGRFAM: glutamate formiminotransferase; PFAM: Formiminotransferase domain protein; Formiminotransferase domain protein
YP_001512139.1	KEGG: ctc:CTC00329 aminopeptidase Y
YP_001512140.1	KEGG: cth:Cthe_0942 MiaB-like tRNA modifying enzyme YliG; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme YliG; PFAM: deoxyribonuclease/rho motif-related TRAM; Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB
YP_001512141.1	catalyzes DNA-template-directed extension of the 3'-end of a DNA strand by one nucleotide at a time. Proposed to be responsible for the synthesis of the lagging strand. In the low GC gram positive bacteria this enzyme is less processive and more error prone than its counterpart in other bacteria.
YP_001512142.1	KEGG: cth:Cthe_1262 hypothetical protein
YP_001512143.1	catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis
YP_001512144.1	TIGRFAM: pyruvate kinase; PFAM: PEP-utilising protein mobile region; Pyruvate kinase barrel; Pyruvate kinase alpha/beta; KEGG: tte:TTE1815 pyruvate kinase
YP_001512145.1	PFAM: regulatory protein TetR; KEGG: mac:MA0368 transcriptional regulator, TetR family
YP_001512146.1	PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FMN-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ctc:CTC00811 fumarate reductase flavoprotein subunit precursor
YP_001512148.1	TIGRFAM: RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; protein of unknown function Met10; (Uracil-5)-methyltransferase; KEGG: cdf:CD3393 putative RNA methyltransferase
YP_001512150.1	PFAM: helix-turn-helix- domain containing protein AraC type; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: cbo:CBO3059 GTP pyrophosphokinase
YP_001512152.1	PFAM: transposase IS3/IS911 family protein; KEGG: bha:BH3445 transposase (05)
YP_001512153.1	PFAM: Integrase catalytic region; KEGG: bcz:pE33L466_0288 transposase
YP_001512154.1	PFAM: regulatory protein TetR; KEGG: drm:Dred_3014 transcriptional regulator, TetR family
YP_001512155.1	PFAM: Rieske [2Fe-2S] domain protein; KEGG: tma:TM1284 oxidase-related protein
YP_001512157.1	KEGG: gtn:GTNG_1582 ATP-binding membrane protein
YP_001512158.1	TIGRFAM: DNA binding domain, excisionase family; PFAM: regulatory protein MerR; Prophage CP4-57 regulatory; KEGG: cac:CAC0252 molybdate-binding protein
YP_001512159.1	KEGG: fnu:FN0532 hypothetical membrane-spanning protein
YP_001512160.1	KEGG: ftw:FTW_0523 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase
YP_001512161.1	KEGG: cpr:CPR_2264 prepilin peptidase-dependent
YP_001512164.1	KEGG: dsy:DSY1126 hypothetical protein
YP_001512165.1	KEGG: gka:GK1783 hypothetical protein
YP_001512166.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: lwe:lwe2628 sensor histidine kinase
YP_001512167.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: lwe:lwe2627 DNA-binding response regulator
YP_001512168.1	KEGG: gka:GK2054 hypothetical protein
YP_001512169.1	PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; KEGG: mba:Mbar_A1826 hypothetical protein
YP_001512170.1	PFAM: glycosyl transferase family 2; chitin synthase; KEGG: sat:SYN_00856 glycosyltransferase
YP_001512171.1	KEGG: dsy:DSY3658 hypothetical protein
YP_001512172.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; 5TM Receptors of the LytS-YhcK type transmembrane region; KEGG: cac:CAC3544 membrane associated GGDEF domain containing protein
YP_001512173.1	PFAM: Rubrerythrin; KEGG: dsy:DSY1206 hypothetical protein
YP_001512174.1	PFAM: ferric-uptake regulator; KEGG: fnu:FN2045 ferric uptake regulation protein
YP_001512175.1	KEGG: ctc:CTC01154 hypothetical protein
YP_001512176.1	TIGRFAM: export-related chaperone CsaA; PFAM: t-RNA-binding domain protein; KEGG: cbo:CBO0622 chaperonin involved in protein secretion
YP_001512177.1	PFAM: iron-containing alcohol dehydrogenase; KEGG: dsy:DSY0623 hypothetical protein
YP_001512178.1	TIGRFAM: YidE/YbjL duplication; PFAM: YidE/YbjL duplication domain protein; KEGG: cdf:CD2344 hypothetical protein
YP_001512179.1	KEGG: gka:GK1208 succinyl-CoA synthetase beta subunit (succinate-CoA ligase beta subunit); TIGRFAM: succinyl-CoA synthetase, beta subunit; PFAM: ATP-citrate lyase/succinyl-CoA ligase; ATP-grasp domain protein
YP_001512180.1	Catalyzes the only substrate-level phosphorylation in the TCA cycle
YP_001512181.1	KEGG: tte:TTE1081 diguanylate cyclase/phosphodiesterase domain 2 (EAL); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001512182.1	PFAM: aldehyde dehydrogenase; KEGG: bld:BLi04011 similar to aldehyde dehydrogenase; RBL02843
YP_001512183.1	PFAM: Patatin; KEGG: cdf:CD2757 putative phospholipase
YP_001512184.1	KEGG: fnu:FN1899 hypothetical lipoprotein
YP_001512185.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: fnu:FN1898 sugar transport ATP-binding protein
YP_001512186.1	PFAM: inner-membrane translocator; KEGG: fnu:FN1897 ABC transporter integral membrane protein
YP_001512187.1	PFAM: inner-membrane translocator; KEGG: fnu:FN1896 ABC transporter integral membrane protein
YP_001512188.1	PFAM: arsenate reductase and related; KEGG: cth:Cthe_1508 hypothetical protein
YP_001512189.1	TIGRFAM: C_GCAxxG_C_C family protein; KEGG: cbo:CBO1521 hypothetical protein
YP_001512190.1	PFAM: OsmC family protein; KEGG: sth:STH27 putative redox protein
YP_001512191.1	PFAM: short chain fatty acid transporter; KEGG: fnu:FN1858 short-chain fatty acids transporter
YP_001512192.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: cdf:CD1054 butyryl-CoA dehydrogenase
YP_001512193.1	PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: cdf:CD1055 electron transfer flavoprotein beta-subunit
YP_001512194.1	PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: ctc:CTC00712 electron transfer flavoprotein alpha-subunit fixB
YP_001512195.1	PFAM: glycosyl transferase family 2; KEGG: cdf:CD3350 putative glycosyl transferase
YP_001512196.1	PFAM: Radical SAM domain protein; KEGG: drm:Dred_1282 radical SAM domain protein
YP_001512197.1	KEGG: drm:Dred_1283 hypothetical protein
YP_001512198.1	TIGRFAM: uracil-DNA glycosylase; PFAM: Uracil-DNA glycosylase superfamily; KEGG: cpr:CPR_0249 uracil-DNA glycosylase
YP_001512199.1	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: cth:Cthe_1410 cation diffusion facilitator family transporter
YP_001512200.1	PFAM: nitroreductase; KEGG: cdf:CD2572 putative nitroreductase
YP_001512201.1	PFAM: regulatory protein GntR HTH; KEGG: cbo:CBO1205 GntR-family transcriptional regulator
YP_001512202.1	KEGG: cth:Cthe_3235 hypothetical protein
YP_001512203.1	TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: csc:Csac_0467 RNA polymerase, sigma-24 subunit, ECF subfamily
YP_001512204.1	KEGG: dsy:DSY0732 hypothetical protein
YP_001512205.1	PFAM: regulatory protein GntR HTH; KEGG: cbo:CBO1323 GntR-family transcriptional regulator
YP_001512207.1	PFAM: PfkB domain protein; Helix-turn-helix type 11 domain protein; KEGG: cbo:CBO1168 sugar kinase
YP_001512208.1	PFAM: Indigoidine synthase A family protein; KEGG: cbo:CBO1169 hypothetical protein
YP_001512209.1	TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: cac:CAC3083 thioredoxin
YP_001512210.1	PFAM: glucose-inhibited division protein A; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cbo:CBO3433 thioredoxin reductase
YP_001512211.1	PFAM: zinc/iron permease; KEGG: cch:Cag_0157 zinc transporter ZupT
YP_001512212.1	PFAM: protein of unknown function DUF1538; KEGG: cbo:CBO2972 membrane protein
YP_001512213.1	KEGG: dsy:DSY4194 hypothetical protein
YP_001512214.1	TIGRFAM: oligoendopeptidase F; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; Oligopeptidase F; KEGG: tte:TTE2705 oligoendopeptidase F
YP_001512215.1	KEGG: sth:STH2334 hypothetical protein
YP_001512216.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dsy:DSY4865 hypothetical protein
YP_001512217.1	PFAM: protein of unknown function DUF214; KEGG: tte:TTE1976 cell division protein
YP_001512218.1	PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: drm:Dred_0754 haloacid dehalogenase domain protein hydrolase
YP_001512219.1	PFAM: peptidase M29 aminopeptidase II; KEGG: tde:TDE2337 aminopeptidase
YP_001512220.1	catalyzes the formation of pyruvate from serine
YP_001512221.1	PFAM: regulatory protein MerR; TipAS antibiotic-recognition domain protein; Transcription regulator MerR DNA binding; KEGG: dsy:DSY4240 hypothetical protein
YP_001512222.1	KEGG: ctc:CTC02470 hypothetical protein
YP_001512223.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cac:CAC3663 response regulator (CheY-like receiver domain and HTH-type DNA-binding domain)
YP_001512224.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: cbo:CBO0296 two-component sensor kinase
YP_001512225.1	KEGG: cth:Cthe_1547 hypothetical protein
YP_001512226.1	catalyzes the reduction of hydroxylamine to ammonia and water
YP_001512227.1	PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: cno:NT01CX_1509 integral membrane protein with CBS domains
YP_001512228.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cno:NT01CX_0281 ABC transporter, ATP-binding protein
YP_001512229.1	involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain
YP_001512230.1	PFAM: cation transporter; KEGG: ctc:CTC00235 potassium uptake protein trkH
YP_001512231.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: gtn:GTNG_2690 thioredoxin peroxidase
YP_001512232.1	TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: drm:Dred_3213 TRAP transporter solute receptor, TAXI family
YP_001512233.1	PFAM: Domain of unknown function DUF1850; KEGG: oih:OB3065 hypothetical protein
YP_001512234.1	TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: drm:Dred_3211 TRAP transporter, 4TM/12TM fusion protein
YP_001512235.1	PFAM: protein of unknown function DUF161; KEGG: cdf:CD1022 hypothetical protein
YP_001512236.1	PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: btl:BALH_2271 D-alanyl-D-alanine carboxypeptidase family protein
YP_001512237.1	KEGG: cno:NT01CX_0447 probable membrane protein
YP_001512238.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: ctc:CTC00913 transcriptional regulatory protein
YP_001512239.1	PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: cbo:CBO1599 ABC transporter, ATP-binding/permease protein
YP_001512240.1	PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: cbo:CBO1600 ABC transporter, ATP-binding/permease protein
YP_001512241.1	KEGG: cbo:CBO1213 signaling protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: PAS domain containing protein
YP_001512242.1	PFAM: Rubrerythrin; KEGG: cbo:CBO0644 hypothetical protein
YP_001512243.1	PFAM: protein of unknown function DUF187; KEGG: bat:BAS2289 hypothetical protein
YP_001512244.1	KEGG: cth:Cthe_0277 hypothetical protein
YP_001512245.1	PFAM: pseudouridine synthase; KEGG: dsy:DSY0510 hypothetical protein
YP_001512246.1	PFAM: UvrD/REP helicase; KEGG: cpe:CPE1619 hypothetical protein
YP_001512247.1	PFAM: iron-containing alcohol dehydrogenase; KEGG: tpt:Tpet_0107 iron-containing alcohol dehydrogenase
YP_001512248.1	KEGG: cpr:CPR_0880 hypothetical protein
YP_001512249.1	TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: cdf:CD0677 putative RNA polymerase sigma factor
YP_001512250.1	KEGG: bha:BH3497 hypothetical protein
YP_001512252.1	KEGG: ctc:CTC02230 putative tellurium resistance protein
YP_001512253.1	PFAM: toxic anion resistance family protein; KEGG: ctc:CTC02231 tellurite resistance protein
YP_001512254.1	PFAM: stress protein; KEGG: ctc:CTC02234 tellurium resistance protein terD
YP_001512255.1	PFAM: protein of unknown function DUF124; KEGG: drm:Dred_0344 protein of unknown function DUF124
YP_001512256.1	PFAM: stress protein; KEGG: bsu:BG12767 similar to tellurium resistance protein
YP_001512257.1	PFAM: stress protein; KEGG: bld:BLi00356 similar to tellurium resistance protein; RBL02593
YP_001512258.1	KEGG: bca:BCE_5091 hypothetical protein
YP_001512259.1	KEGG: sma:SAV5809 hypothetical protein
YP_001512260.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: spd:SPD_0464 ABC transporter, ATP-binding protein
YP_001512261.1	KEGG: ssp:SSP0963 putative transporter protein
YP_001512262.1	PFAM: regulatory protein GntR HTH; KEGG: cno:NT01CX_2435 transcriptional regulator, GntR family
YP_001512263.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cbo:CBO2917 ABC transporter ATP-binding protein
YP_001512264.1	KEGG: pth:PTH_0277 hypothetical membrane protein
YP_001512265.1	KEGG: tte:TTE0937 hypothetical protein
YP_001512266.1	TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: cth:Cthe_0328 peptide chain release factor 3
YP_001512267.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: amt:Amet_3690 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
YP_001512268.1	KEGG: amt:Amet_3689 hypothetical protein
YP_001512269.1	KEGG: amt:Amet_3684 UspA
YP_001512270.1	KEGG: amt:Amet_3682 conserved hypothetical radical SAM protein; TIGRFAM: conserved hypothetical radical SAM protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_001512271.1	KEGG: amt:Amet_3679 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase
YP_001512272.1	PFAM: RelA/SpoT domain protein; KEGG: amt:Amet_3678 RelA/SpoT domain protein
YP_001512273.1	PFAM: metallophosphoesterase; KEGG: amt:Amet_3677 metallophosphoesterase
YP_001512274.1	KEGG: amt:Amet_3675 fructose-1,6-bisphosphate aldolase, class II; TIGRFAM: ketose-bisphosphate aldolase; fructose-1,6-bisphosphate aldolase, class II; PFAM: ketose-bisphosphate aldolase class-II
YP_001512275.1	PFAM: CDP-alcohol phosphatidyltransferase; KEGG: amt:Amet_3674 CDP-diacylglycerol--serine O-phosphatidyltransferase
YP_001512276.1	PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: amt:Amet_3672 pseudouridine synthase
YP_001512277.1	PFAM: extracellular solute-binding protein family 3; KEGG: drm:Dred_2235 extracellular solute-binding protein, family 3
YP_001512278.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: drm:Dred_2234 polar amino acid ABC transporter, inner membrane subunit
YP_001512279.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: drm:Dred_2233 ABC transporter related
YP_001512280.1	TIGRFAM: RNA methyltransferase, TrmA family; PFAM: putative RNA methylase; conserved hypothetical protein; (Uracil-5)-methyltransferase; KEGG: cdf:CD0406 putative tRNA (uracil-5-)-methyltransferase
YP_001512281.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cdf:CD0462 two-component response regulator
YP_001512282.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: cbe:Cbei_2048 integral membrane sensor signal transduction histidine kinase
YP_001512283.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: oih:OB0359 ABC transporter ATP-binding protein
YP_001512284.1	PFAM: protein of unknown function DUF214; KEGG: cac:CAC2731 predicted permease
YP_001512285.1	PFAM: protein of unknown function DUF323; KEGG: bce:BC2800 hypothetical cytosolic protein
YP_001512287.1	PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: swo:Swol_2219 hypothetical protein
YP_001512288.1	PFAM: Integrase catalytic region; KEGG: bcz:pE33L466_0288 transposase
YP_001512289.1	PFAM: transposase IS3/IS911 family protein; KEGG: bha:BH3445 transposase (05)
YP_001512292.1	PFAM: Radical SAM domain protein; KEGG: btk:BT9727_3948 spore photoproduct lyase
YP_001512293.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bsu:BG14032 similar to transcriptional regulator (LysR family)
YP_001512294.1	TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: dsy:DSY1416 hypothetical protein
YP_001512295.1	PFAM: nitroreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dsy:DSY3558 hypothetical protein
YP_001512296.1	PFAM: extracellular solute-binding protein family 3; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: cdf:CD1738 two-component sensor histidine kinase
YP_001512297.1	PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: cdf:CD1739 two-component response regulator
YP_001512298.1	TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: ppr:PBPRB1320 putative sodium/alanine symporter
YP_001512299.1	KEGG: chu:CHU_2313 rifampin ADP-ribosylating transferase
YP_001512300.1	PFAM: regulatory protein TetR; KEGG: btk:BT9727_2272 transcriptional regulator, TetR family
YP_001512301.1	PFAM: major facilitator superfamily MFS_1; KEGG: bcz:pE33L466_0066 macrolide-efflux protein
YP_001512302.1	PFAM: protein of unknown function DUF214; KEGG: bcz:BCZK2228 ABC transporter, permease
YP_001512303.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bca:BCE_2513 ABC transporter, ATP-binding protein
YP_001512304.1	PFAM: regulatory protein MerR; TipAS antibiotic-recognition domain protein; KEGG: bcl:ABC3975 transcriptional activator, MerR family
YP_001512305.1	KEGG: cac:CAC3664 predicted flavodoxin
YP_001512306.1	PFAM: bifunctional deaminase-reductase domain protein; KEGG: cac:CAC1495 enzyme of dihydrofolate reductase family, ortholog YWFD B.subtilis
YP_001512307.1	PFAM: regulatory protein TetR; KEGG: cbo:CBO2044 TetR-family transcriptional regulator
YP_001512308.1	in group A Streptococci this protein was found to cross react with anti myosin antibodies and may play a role in rheumatic fever
YP_001512309.1	KEGG: cbo:CBO2042 hypothetical protein
YP_001512310.1	KEGG: cbo:CBO2041 hypothetical protein
YP_001512311.1	PFAM: von Willebrand factor type A; KEGG: cbo:CBO2040 hypothetical protein
YP_001512312.1	PFAM: transferase hexapeptide repeat containing protein; KEGG: dsy:DSY1145 hypothetical protein
YP_001512313.1	KEGG: ctc:CTC01162 membrane associated protein
YP_001512314.1	required for the synthesis of the hydromethylpyrimidine moiety of thiamine
YP_001512315.1	TIGRFAM: thiW protein; PFAM: ThiW family protein; KEGG: ctc:CTC01754 hypothetical protein
YP_001512317.1	PFAM: regulatory protein GntR HTH; KEGG: cbo:CBO0640 GntR-family transcriptional regulator
YP_001512318.1	PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: dsy:DSY1235 hypothetical protein
YP_001512319.1	PFAM: Streptomycin adenylyltransferase; KEGG: ser:SEA0012 aminoglycoside 6-adenylyltransferase
YP_001512320.1	KEGG: sen:SACE_1856 phosphotransferase (aminonucleoside antibiotic resistance)
YP_001512321.1	KEGG: cth:Cthe_3142 hypothetical protein
YP_001512322.1	PFAM: UV-endonuclease UvdE; KEGG: cno:NT01CX_0232 UV DNA damage endonuclease (UV-endonuclease) UvdE
YP_001512323.1	PFAM: protein of unknown function DUF378; KEGG: bsu:BG14050 hypothetical protein
YP_001512324.1	PFAM: helix-turn-helix domain protein; KEGG: dsy:DSY0593 hypothetical protein
YP_001512325.1	KEGG: dsy:DSY0594 hypothetical protein
YP_001512326.1	PFAM: Abortive infection protein; KEGG: rrs:RoseRS_3666 abortive infection protein
YP_001512327.1	PFAM: regulatory protein MerR; KEGG: dsy:DSY3460 hypothetical protein
YP_001512328.1	KEGG: vco:VC0395_A2387 putative lipoprotein
YP_001512329.1	TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: bat:BAS4558 RNA polymerase sigma-70 factor, ECF subfamily
YP_001512330.1	PFAM: Propeptide PepSY amd peptidase M4; KEGG: cth:Cthe_2522 membrane associated protein
YP_001512331.1	PFAM: Propeptide PepSY amd peptidase M4; KEGG: cdf:CD3192 cell surface protein
YP_001512332.1	PFAM: regulatory protein MarR; transcriptional regulator TrmB; KEGG: cbo:CBO1102 MarR-family transcriptional regulator
YP_001512334.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rrs:RoseRS_2625 two component transcriptional regulator, winged helix family
YP_001512335.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_2626 integral membrane sensor signal transduction histidine kinase
YP_001512336.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: cdf:CD1871 hypothetical protein
YP_001512337.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cdf:CD1872 putative iron-sulfur-binding membrane protein
YP_001512338.1	PFAM: microcompartments protein; KEGG: lmo:lmo1144 similar to Salmonelle enterica PduU protein
YP_001512339.1	TIGRFAM: ethanolamine utilization protein, EutP; KEGG: efa:EF1638 propanediol utilization protein PduV
YP_001512340.1	TIGRFAM: ATP--cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: ssa:SSA_0513 ATP:cob(I)alamin adenosyltransferase, putative
YP_001512341.1	PFAM: iron-containing alcohol dehydrogenase; KEGG: lmf:LMOf2365_1181 alcohol dehydrogenase, iron-dependent
YP_001512342.1	PFAM: microcompartments protein; KEGG: cdf:CD1908 putative ethanolamine/propanediol utilization protein
YP_001512343.1	ethanolamine utilization protein EutA
YP_001512344.1	PFAM: Ethanolamine ammonia lyase large subunit; KEGG: ssa:SSA_0519 ethanolamine ammonia-lyase large subunit, putative
YP_001512345.1	catalyzes the formation of acetaldehyde from ethanolamine
YP_001512346.1	PFAM: microcompartments protein; KEGG: efa:EF1626 ethanolamine utilization protein EutL
YP_001512347.1	PFAM: microcompartments protein; KEGG: efa:EF1625 microcompartment protein family
YP_001512348.1	TIGRFAM: acetaldehyde dehydrogenase (acetylating); PFAM: aldehyde dehydrogenase; KEGG: ssa:SSA_0523 aldehyde dehydrogenase, putative
YP_001512349.1	PFAM: microcompartments protein; KEGG: lwe:lwe1138 propanediol/ethanolamine utilization protein
YP_001512350.1	KEGG: lmo:lmo1181 similar to cobalamin adenosyl transferase
YP_001512351.1	PFAM: Propanediol utilization protein; KEGG: ssa:SSA_0527 propanediol utilization protein PduL
YP_001512352.1	KEGG: ssa:SSA_0528 conserved uncharacterized protein
YP_001512353.1	PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; KEGG: ssa:SSA_0529 ethanolamine utilization protein, putative
YP_001512354.1	PFAM: Ethanolamine utilisation protein EutH; KEGG: efa:EF1618 ethanolamine utilization protein EutH
YP_001512355.1	PFAM: Ethanolamine utilisation EutQ family protein; KEGG: efa:EF1617 hypothetical protein
YP_001512356.1	KEGG: tde:TDE2415 hypothetical protein
YP_001512357.1	KEGG: tde:TDE2415 hypothetical protein
YP_001512358.1	KEGG: cth:Cthe_1483 hypothetical protein
YP_001512359.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: chy:CHY_1254 sigma-54 dependent transcriptional regulator
YP_001512360.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: cdf:CD0799 putative beta-alanine CoA-transferase
YP_001512361.1	PFAM: Citrate transporter; Dicarboxylate carrier MatC domain protein; KEGG: cdf:CD0798 hypothetical protein
YP_001512362.1	PFAM: pyruvate carboxyltransferase; KEGG: cdf:CD0797 putative hydroxymethylglutaryl-CoA lyase
YP_001512363.1	PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: fnu:FN1249 transcriptional regulator, DeoR family
YP_001512364.1	PFAM: protein of unknown function DUF1706; KEGG: fnu:FN1248 hypothetical cytosolic protein
YP_001512366.1	PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: cdf:CD2817 ABC transporter, ATP-binding/permease protein
YP_001512367.1	PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: cdf:CD2818 ABC transporter, ATP-binding/permease protein
YP_001512368.1	PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: cbo:CBO1954 MerR-family transcriptional regulator
YP_001512369.1	PFAM: metallophosphoesterase; KEGG: btl:BALH_0982 phosphoesterase
YP_001512370.1	PFAM: sodium:dicarboxylate symporter; KEGG: tde:TDE0130 sodium/dicarboxylate symporter family protein
YP_001512371.1	PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: fnu:FN1055 cysteine synthase
YP_001512372.1	PFAM: beta-lactamase; copper amine oxidase domain protein; KEGG: bca:BCE_2294 penicillin-binding protein, putative
YP_001512374.1	PFAM: Chromate transporter; KEGG: cdf:CD0201 putative chromate transporter
YP_001512375.1	PFAM: Chromate transporter; KEGG: ctc:CTC00660 chromate transport protein
YP_001512376.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: tte:TTE0987 transcriptional regulator
YP_001512377.1	PFAM: Ferritin Dps family protein; KEGG: fnu:FN1079 neutrophil-activating protein A
YP_001512379.1	PFAM: alpha/beta hydrolase fold; KEGG: bsu:BG12442 similar to hydrolase
YP_001512380.1	KEGG: dvl:Dvul_0418 diguanylate cyclase with PAS/PAC sensor; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001512382.1	PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: ctc:CTC00592 alginate O-acetylation protein
YP_001512383.1	KEGG: ctc:CTC00591 hypothetical protein
YP_001512384.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: swo:Swol_1359 hypothetical protein
YP_001512385.1	PFAM: VanW family protein; KEGG: swo:Swol_1358 uncharacterized vancomycin resistance protein-like protein
YP_001512386.1	PFAM: major facilitator superfamily MFS_1; KEGG: bce:BC2970 tetracycline resistance determinant TetV
YP_001512387.1	PFAM: Orn/Lys/Arg decarboxylase major region; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: cth:Cthe_1918 Orn/Lys/Arg decarboxylase, major region
YP_001512388.1	PFAM: Uracil-DNA glycosylase superfamily; KEGG: ppr:PBPRA3427 hypothetical protein
YP_001512389.1	KEGG: ctc:CTC00154 hypothetical protein
YP_001512390.1	PFAM: nucleoside recognition domain protein; KEGG: ctc:CTC00841 membrane protein
YP_001512391.1	PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: sai:Saci_0713 threonine dehydratase
YP_001512392.1	TIGRFAM: Quinone oxidoreductase putative YhdH/YhfP; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: efa:EF2654 alcohol dehydrogenase, zinc-containing
YP_001512393.1	PFAM: regulatory protein MarR; KEGG: saj:SaurJH9_2750 transcriptional regulator, MarR family
YP_001512394.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mma:MM0185 short chain dehydrogenase/reductase
YP_001512395.1	KEGG: cbo:CBO0382 membrane-associated acyltransferase
YP_001512396.1	PFAM: aminotransferase class I and II; KEGG: fnu:FN1152 aspartate aminotransferase
YP_001512397.1	PFAM: Pirin domain protein; KEGG: cpf:CPF_0792 pirin family protein
YP_001512398.1	PFAM: Cupin 2 conserved barrel domain protein; KEGG: ctc:CTC01899 hypothetical protein
YP_001512399.1	PFAM: purine catabolism PurC domain protein; KEGG: drm:Dred_0388 purine catabolism PurC domain protein
YP_001512400.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: cno:NT01CX_0959 integral membrane protein
YP_001512401.1	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; virulence factor MVIN family protein; KEGG: cdf:CD2108 putative drug/sodium antiporter
YP_001512403.1	PFAM: cation transporter; KEGG: cth:Cthe_1658 potassium uptake protein, TrkH family
YP_001512404.1	PFAM: TrkA-N domain protein; KEGG: cth:Cthe_1659 TrkA-N
YP_001512405.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: dsy:DSY3762 hypothetical protein
YP_001512406.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: dsy:DSY3761 hypothetical protein
YP_001512407.1	TIGRFAM: cobyrinic acid a,c-diamide synthase; PFAM: Cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: cno:NT01CX_0583 cobyrinic acid a,c-diamide synthase
YP_001512408.1	catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation
YP_001512409.1	PFAM: Amidohydrolase 3; KEGG: bsu:BG13835 similar to hypothetical proteins
YP_001512410.1	PFAM: amino acid permease-associated region; KEGG: cbo:CBO1377 amino acid permease
YP_001512411.1	KEGG: cth:Cthe_2995 hypothetical protein
YP_001512412.1	TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: sth:STH226 uracil permease
YP_001512413.1	KEGG: ecp:ECP_4037 hypothetical protein YahE
YP_001512414.1	PFAM: FdrA family protein; KEGG: mta:Moth_2122 FdrA
YP_001512415.1	KEGG: mta:Moth_2121 protein of unknown function DUF1116
YP_001512416.1	PFAM: protein of unknown function DUF1116; KEGG: mta:Moth_2121 protein of unknown function DUF1116
YP_001512417.1	PFAM: cyclase family protein; KEGG: hwa:HQ1938A probable cyclase
YP_001512418.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: drm:Dred_1548 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_001512419.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: cdf:CD0799 putative beta-alanine CoA-transferase
YP_001512420.1	PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: pth:PTH_1540 aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs
YP_001512421.1	PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: drm:Dred_1503 (2Fe-2S)-binding domain protein
YP_001512422.1	PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: nca:Noca_4271 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding
YP_001512423.1	KEGG: dsy:DSY1981 hypothetical protein
YP_001512424.1	PFAM: chemotaxis sensory transducer; KEGG: mba:Mbar_A0989 methyl-accepting chemotaxis protein
YP_001512425.1	PFAM: protein of unknown function DUF204; KEGG: cth:Cthe_1420 protein of unknown function DUF204
YP_001512426.1	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: cth:Cthe_2306 MATE efflux family protein
YP_001512427.1	PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP
YP_001512428.1	KEGG: ctc:CTC01832 hypothetical protein
YP_001512429.1	PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: bha:BH3873 acetolactate synthase large subunit
YP_001512432.1	PFAM: ApbE family lipoprotein; KEGG: ctc:CTC01829 putative thiamine biosynthesis lipoprotein ApbE
YP_001512433.1	PFAM: protein of unknown function DUF161; KEGG: cdf:CD2617 hypothetical protein
YP_001512434.1	catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs
YP_001512435.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cdf:CD0627A putative ferredoxin
YP_001512436.1	KEGG: cdf:CD0628 hypothetical protein
YP_001512437.1	PFAM: acyl-ACP thioesterase; KEGG: cth:Cthe_3072 acyl-ACP thioesterase
YP_001512438.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Rhodanese domain protein; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: bce:BC0791 NADH dehydrogenase
YP_001512439.1	PFAM: regulatory protein ArsR; KEGG: cbo:CBO0182 ArsR-family transcriptional regulator
YP_001512440.1	PFAM: chemotaxis sensory transducer; KEGG: cbo:CBO1558 methyl-accepting chemotaxis protein
YP_001512441.1	PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: cno:NT01CX_0653 peptidyl-prolyl cis-trans isomerase
YP_001512442.1	PFAM: manganese containing catalase; KEGG: ctc:CTC00870 spore coat protein
YP_001512443.1	KEGG: mta:Moth_1391 spore coat peptide assembly protein cotJB
YP_001512445.1	PFAM: NodS family protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: cpr:CPR_0075 putative methyltransferase
YP_001512447.1	PFAM: GCN5-related N-acetyltransferase; KEGG: rci:RCIX1500 putative acetyltransferase (GNAT family)
YP_001512448.1	PFAM: endodeoxyribonuclease RusA; KEGG: cdf:CD0562 putative endonuclease
YP_001512449.1	TIGRFAM: signal peptidase I; PFAM: peptidase S24 S26A and S26B; KEGG: dsy:DSY1580 hypothetical protein
YP_001512450.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; domain of unknown function DUF1730; KEGG: bsu:BG12236 similar to hypothetical proteins
YP_001512451.1	PFAM: peptidase S16 lon domain protein; KEGG: cth:Cthe_1773 peptidase S16, lon-like protein
YP_001512452.1	KEGG: tde:TDE2194 8-amino-7-oxononanoate synthase, putative; TIGRFAM: 8-amino-7-oxononanoate synthase; pyridoxal phosphate-dependent acyltransferase, putative; PFAM: aminotransferase class I and II
YP_001512453.1	KEGG: cpr:CPR_1318 endonuclease III; TIGRFAM: endonuclease III; PFAM: HhH-GPD family protein
YP_001512454.1	PFAM: cell division protein FtsA; KEGG: ctc:CTC00985 cell division protein FtsA
YP_001512455.1	PFAM: VanW family protein; G5 domain protein; KEGG: tte:TTE1768 hypothetical protein
YP_001512456.1	KEGG: ctc:CTC00335 hypothetical protein
YP_001512457.1	KEGG: bca:BCE_1868 hypothetical protein
YP_001512458.1	PFAM: periplasmic binding protein; KEGG: tte:TTE0372 ABC-type Fe3+-siderophores transport systems, periplasmic components
YP_001512459.1	PFAM: transport system permease protein; KEGG: cno:NT01CX_2085 iron (III) dicitrate transport system permease protein
YP_001512460.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rci:RRC303 ABC-type transport system, ATPase component
YP_001512461.1	PFAM: ferric-uptake regulator; KEGG: tte:TTE1767 Fe2+/Zn2+ uptake regulation proteins
YP_001512462.1	TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase type 3; KEGG: ctc:CTC00366 predicted hydrolase
YP_001512463.1	PFAM: Peptidoglycan-binding LysM; metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: bcl:ABC0966 nucleotidase
YP_001512464.1	catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr)
YP_001512465.1	PFAM: C4-dicarboxylate anaerobic carrier; Citrate transporter; KEGG: lpf:lpl1924 hypothetical protein
YP_001512466.1	KEGG: fnu:FN1584 beta-lactamase
YP_001512467.1	PFAM: protein of unknown function DUF819; KEGG: pat:Patl_4172 protein of unknown function DUF819
YP_001512468.1	PFAM: NLP/P60 protein; KEGG: pat:Patl_4171 NLP/P60
YP_001512469.1	KEGG: gtn:GTNG_3178 hypothetical protein
YP_001512470.1	PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: cac:CAC0192 similar to chloromuconate cycloisomerase
YP_001512471.1	PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: cth:Cthe_0338 NADH-quinone oxidoreductase, E subunit
YP_001512472.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: mta:Moth_1718 NADH dehydrogenase (quinone)
YP_001512473.1	TIGRFAM: hydrogenase, Fe-only; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; iron hydrogenase small subunit; hydrogenase large subunit domain protein; KEGG: csc:Csac_1864 hydrogenase, Fe-only
YP_001512474.1	KEGG: cac:CAC0487 uncharacterized protein, ortholog of Thermotoga maritima (4981823)
YP_001512475.1	KEGG: cpe:CPE1487 putative sulfonate/nitrate transport system substrate-binding protein
YP_001512476.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cpf:CPF_1737 ABC transporter, permease protein
YP_001512477.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: drm:Dred_0439 ABC transporter related
YP_001512478.1	PFAM: MscS Mechanosensitive ion channel; KEGG: bfs:BF0722 putative transmembrane transport protein
YP_001512479.1	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) in DNA. Repairs alkylated guanine in DNA by stoichiometrically transferring the alkyl group at the O-6 position to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated
YP_001512480.1	TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: drm:Dred_3222 YbaK/EbsC protein
YP_001512481.1	KEGG: dsy:DSY1337 hypothetical protein
YP_001512482.1	KEGG: dsy:DSY1338 hypothetical protein
YP_001512483.1	TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: dsy:DSY1339 hypothetical protein
YP_001512484.1	KEGG: cbo:CBO1176 membrane protein
YP_001512485.1	KEGG: drm:Dred_1536 ubiquitin-associated-domain-containing protein
YP_001512486.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: dsy:DSY1143 hypothetical protein
YP_001512487.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: tte:TTE1017 sensory transduction histidine kinase
YP_001512488.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dsy:DSY4238 hypothetical protein
YP_001512489.1	KEGG: cth:Cthe_2305 putative undecaprenol kinase; TIGRFAM: putative undecaprenol kinase; PFAM: Bacitracin resistance protein BacA
YP_001512490.1	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: msi:Msm_0152 Na+-driven multidrug efflux pump (MATE family), NorM
YP_001512491.1	KEGG: tde:TDE0748 iron compound ABC transporter, periplasmic iron compound-binding protein, putative
YP_001512492.1	PFAM: transport system permease protein; KEGG: tde:TDE0747 iron compound ABC transporter, permease protein, putative
YP_001512493.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tde:TDE0746 iron compound ABC transporter, ATP-binding protein, putative
YP_001512494.1	TIGRFAM: RNA methyltransferase, TrmH family, group 2; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: cdf:CD0566 putative RNA methylase
YP_001512495.1	TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: csc:Csac_1297 DegV family protein
YP_001512496.1	KEGG: cbo:CBO1255 component of glycine reductase complex
YP_001512497.1	TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; FAD dependent oxidoreductase; KEGG: cbo:CBO1259 thioredoxin reductase
YP_001512498.1	PFAM: Thioredoxin domain; KEGG: cdf:CD2355 thioredoxin
YP_001512499.1	PFAM: Glycine/sarcosine/betaine reductase complex protein B alpha and beta subunits; KEGG: cdf:CD2354 glycine reductase complex component B alpha and beta subunits
YP_001512500.1	GrdA accepts a carboxymethylselenoether from protein B and transfers it to protein C forming a protein C-bound acetyl-thioester; oxidized GrdA is then reduced by thioredoxin
YP_001512501.1	KEGG: cdf:CD2351 glycine reductase complex component B gamma subunit; Contains selenocysteine; TIGRFAM: glycine reductase, selenoprotein B; selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family; PFAM: Selenoprotein B glycine/betaine/sarcosine/D-proline reductase
YP_001512502.1	PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: cbo:CBO1263 glycine/sarcosine/betaine reductase complex component C beta subunit
YP_001512503.1	PFAM: fatty acid synthesis plsX protein; KEGG: cbo:CBO1264 glycine/sarcosine/betaine reductase complex component C alpha subunit
YP_001512504.1	PFAM: basic membrane lipoprotein; KEGG: tpa:TP0319 putative simple sugar transport system substrate-binding protein
YP_001512505.1	KEGG: hiq:CGSHiGG_05855 hypothetical protein
YP_001512506.1	PFAM: Radical SAM domain protein; KEGG: hin:HI0520 hypothetical protein
YP_001512507.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cpf:CPF_1831 ABC transporter, ATP-binding protein
YP_001512508.1	PFAM: inner-membrane translocator; KEGG: tpa:TP0322 putative simple sugar transport system permease protein
YP_001512509.1	PFAM: inner-membrane translocator; KEGG: tpa:TP0323 putative simple sugar transport system permease protein
YP_001512510.1	TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor; sigma-54 factor core-binding region; sigma-54 DNA-binding domain protein; KEGG: pth:PTH_2724 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog
YP_001512511.1	PFAM: putative sugar-binding domain protein; KEGG: tte:TTE1763 Transcriptional regulator, contains sigma factor-related N-terminal domain
YP_001512512.1	KEGG: csc:Csac_1953 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase
YP_001512513.1	PFAM: phosphoglycerate kinase; KEGG: tte:TTE1761 3-phosphoglycerate kinase
YP_001512514.1	Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate
YP_001512515.1	catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
YP_001512516.1	enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis
YP_001512517.1	TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: swo:Swol_0277 preprotein translocase, SecG subunit
YP_001512518.1	pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient
YP_001512519.1	PFAM: protein of unknown function DUF1294; KEGG: cpr:CPR_0517 hypothetical protein
YP_001512520.1	KEGG: cbo:CBO0232 ribonuclease R; TIGRFAM: VacB and RNase II family 3'-5' exoribonuclease; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; Ribonuclease B OB region domain; SMART: Cold shock protein
YP_001512521.1	binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation
YP_001512522.1	KEGG: ctc:CTC02090 ATP-dependent DNA helicase recQ; TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; Helicase superfamily 1 and 2 ATP-binding; SMART: DEAD-like helicases
YP_001512523.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bha:BH0286 ABC transporter (ATP-binding protein)
YP_001512524.1	PFAM: protein of unknown function DUF214; KEGG: cth:Cthe_2111 protein of unknown function DUF214
YP_001512525.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bha:BH0288 two-component response regulator
YP_001512526.1	PFAM: ATP-binding region ATPase domain protein; KEGG: bcl:ABC0255 two-component sensor histidine kinase
YP_001512527.1	PFAM: dihydrouridine synthase DuS; KEGG: cpf:CPF_1482 dihydrouridine synthase family protein
YP_001512528.1	KEGG: cdf:CD3040 hypothetical protein
YP_001512529.1	PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: cdf:CD3039 hypothetical protein
YP_001512530.1	KEGG: cdf:CD3038 hypothetical protein
YP_001512531.1	PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: cth:Cthe_0428 NADH dehydrogenase (ubiquinone), 24 kDa subunit
YP_001512532.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: cth:Cthe_0429 NADH dehydrogenase (quinone)
YP_001512533.1	TIGRFAM: hydrogenase, Fe-only; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; iron hydrogenase small subunit; hydrogenase large subunit domain protein; KEGG: cth:Cthe_0430 hydrogenase, Fe-only
YP_001512534.1	catalyzes the formation of biotin from dethiobiotin and sulfur
YP_001512535.1	in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and IscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center; in Thermotoga this enzyme has an extra C-terminal domain
YP_001512536.1	TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Miro domain protein; KEGG: cno:NT01CX_1486 GTP-binding protein
YP_001512537.1	PFAM: RNA-binding S4 domain protein; KEGG: bce:BC4965 hypothetical cytosolic protein
YP_001512538.1	PFAM: Methyltransferase type 11; KEGG: gtn:GTNG_1573 ribosomal RNA large subunit methyltransferase A
YP_001512539.1	PFAM: GTP-binding protein HSR1-related; KEGG: cdf:CD2209 putative GTP-binding protein
YP_001512540.1	KEGG: bat:BAS2607 hypothetical protein
YP_001512541.1	KEGG: bha:BH1891 hypothetical protein
YP_001512542.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; CBS domain containing protein; EAL domain protein; KEGG: cac:CAC2702 possible signal transduction protein (containing EAL, CBS and GGDEF domains)
YP_001512543.1	PFAM: GCN5-related N-acetyltransferase; KEGG: cac:CAC3322 predicted acetyltransferase
YP_001512544.1	PFAM: tRNA synthetase class I (M); KEGG: chu:CHU_2689 methionine--tRNA ligase (methionyl-tRNA synthetase)
YP_001512545.1	TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: tte:TTE2002 glycerol kinase
YP_001512546.1	methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content
YP_001512548.1	PFAM: Tellurite resistance protein TehB; Methyltransferase type 12; KEGG: cno:NT01CX_2005 hypothetical protein
YP_001512549.1	PFAM: peptidase M55 D-aminopeptidase; KEGG: lin:lin0201 similar to dipeptide ABC transporter
YP_001512551.1	KEGG: cdf:CD2126 hypothetical protein
YP_001512552.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: bce:BC4034 nitrilase
YP_001512553.1	PFAM: TOBE domain protein; KEGG: rru:Rru_A1539 molybdenum-pterin binding protein
YP_001512554.1	TIGRFAM: cobalamin biosynthesis protein CbiM; PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: cdf:CD0324 putative cobalt transport protein
YP_001512555.1	TIGRFAM: cobalt transport protein; PFAM: Cobalt transport protein CbiN; KEGG: cdf:CD0325 cobalt transport protein
YP_001512556.1	TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: cdf:CD0326 cobalt transport protein
YP_001512557.1	KEGG: cdf:CD0327 cobalt ABC transporter, ATP-binding protein; TIGRFAM: cobalt ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase
YP_001512558.1	PFAM: Precorrin-8X methylmutase CbiC/CobH; KEGG: tde:TDE2555 precorrin-8X methylmutase
YP_001512559.1	Catalyzes the methylation of C-1 in cobalt-precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A
YP_001512560.1	TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: tde:TDE2373 precorrin-6Y C5,15-methyltransferase, putative
YP_001512561.1	TIGRFAM: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; KEGG: tde:TDE2374 precorrin-8W decarboxylase, putative
YP_001512562.1	KEGG: cpr:CPR_1236 precorrin-4 C11-methyltransferase; TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
YP_001512563.1	catalyzes the formation of cobalt-precorrin 4 from cobalt-precorrin 3
YP_001512564.1	TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: tde:TDE0623 precorrin-3B C17-methyltransferase
YP_001512565.1	TIGRFAM: precorrin-6x reductase; PFAM: Precorrin-6x reductase CbiJ/CobK; KEGG: tde:TDE0624 precorrin-6X reductase, putative
YP_001512566.1	PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: tde:TDE2657 precorrin-2 C20-methyltransferase, putative
YP_001512567.1	PFAM: Chromate transporter; KEGG: ctc:CTC00660 chromate transport protein
YP_001512568.1	PFAM: Chromate transporter; KEGG: cbo:CBO0533 probable chromate transport protein
YP_001512569.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: cno:NT01CX_0182 transcriptional regulator, LysR family
YP_001512570.1	PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: amt:Amet_4711 protein of unknown function DUF395, YeeE/YedE
YP_001512571.1	PFAM: SirA family protein; KEGG: amt:Amet_4710 SirA family protein
YP_001512572.1	PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: amt:Amet_4709 protein of unknown function DUF395, YeeE/YedE
YP_001512573.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: amt:Amet_4708 transcriptional regulator, LysR family
YP_001512574.1	KEGG: dsy:DSY2099 hypothetical protein; Contains selenocysteine
YP_001512575.1	KEGG: dde:Dde_3211 split soret cytochrome c precursor; Contains selenocysteine
YP_001512576.1	KEGG: drm:Dred_3221 hypothetical protein
YP_001512577.1	decatenates replicating daughter chromosomes
YP_001512578.1	PFAM: regulatory protein MarR; KEGG: ctc:CTC02048 transcriptional regulator, MarR family
YP_001512579.1	TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: cbo:CBO1825 decarboxylase
YP_001512580.1	TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: biotin/lipoyl attachment domain-containing protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: ctc:CTC02047 dihydrolipoamide dehydrogenase
YP_001512581.1	PFAM: PP-loop domain protein; KEGG: cbo:CBO0341 hypothetical protein
YP_001512582.1	KEGG: cth:Cthe_2451 SNF2-related protein; PFAM: SNF2-related protein; helicase domain protein; zinc finger SWIM domain protein; SNF2 helicase associated domain protein; SMART: DEAD-like helicases
YP_001512583.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; KEGG: tte:TTE2194 indolepyruvate ferredoxin oxidoreductase, alpha subunit
YP_001512584.1	PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: tte:TTE2193 indolepyruvate ferredoxin oxidoreductase, beta subunit
YP_001512585.1	PFAM: PspC domain protein; KEGG: tte:TTE0864 putative stress-responsive transcriptional regulator
YP_001512586.1	KEGG: cth:Cthe_0073 hypothetical protein
YP_001512587.1	KEGG: bcl:ABC3948 hypothetical protein
YP_001512588.1	PFAM: band 7 protein; KEGG: gtn:GTNG_0296 flottilin
YP_001512589.1	PFAM: integrase family protein; KEGG: cth:Cthe_2455 phage integrase
YP_001512590.1	PFAM: protein of unknown function DUF955; KEGG: drm:Dred_0915 protein of unknown function DUF955
YP_001512591.1	PFAM: helix-turn-helix domain protein; KEGG: drm:Dred_0916 transcriptional regulator, XRE family
YP_001512592.1	PFAM: helix-turn-helix domain protein; KEGG: chy:CHY_1696 prophage LambdaCh01, transcriptional regulator, PBSX family
YP_001512594.1	TIGRFAM: DNA binding domain, excisionase family; KEGG: cth:Cthe_2463 DNA binding domain, excisionase family
YP_001512596.1	KEGG: saj:SaurJH9_2038 primosome, DnaD subunit
YP_001512597.1	KEGG: cbo:CBO2310 hypothetical protein
YP_001512598.1	KEGG: mta:Moth_1976 hypothetical protein
YP_001512599.1	PFAM: chemotaxis sensory transducer; KEGG: bcz:BCZK1024 methyl-accepting chemotaxis protein
YP_001512600.1	PFAM: prolipoprotein diacylglyceryl transferase; KEGG: mta:Moth_1993 prolipoprotein diacylglyceryl transferase
YP_001512601.1	KEGG: csc:Csac_0410 spermine synthase
YP_001512603.1	PFAM: Positive regulator of sigma(E) RseC/MucC; KEGG: cbo:CBO3053 sigma-E factor regulatory protein
YP_001512604.1	KEGG: csc:Csac_0412 hypothetical protein
YP_001512605.1	KEGG: shn:Shewana3_4140 hypothetical protein
YP_001512606.1	TIGRFAM: integral membrane protein TIGR01906; PFAM: Integral membrane protein 1906; KEGG: tte:TTE1993 hypothetical protein
YP_001512607.1	TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: mba:Mbar_A3143 cell surface protein
YP_001512608.1	PFAM: protein of unknown function DUF156; KEGG: drm:Dred_2141 protein of unknown function DUF156
YP_001512609.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper ion binding protein; copper-translocating P-type ATPase; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: dsy:DSY4510 hypothetical protein
YP_001512610.1	PFAM: Heavy metal transport/detoxification protein; KEGG: dsy:DSY4509 hypothetical protein
YP_001512612.1	PFAM: putative cell wall binding repeat 2-containing protein; KEGG: bld:BLi01150 hypothetical protein
YP_001512613.1	PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: hypothetical protein
YP_001512615.1	PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: hiq:CGSHiGG_01145 conserved hypothetical cytochrome c-type biogenesis protein
YP_001512616.1	PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: cbo:CBO0724 cysteine synthase
YP_001512617.1	PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: gka:GK2540 cystathionine gamma-synthase
YP_001512618.1	PFAM: LuxS protein; KEGG: cbo:CBO0725 S-ribosylhomocysteinase
YP_001512619.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: oih:OB1106 hypothetical protein
YP_001512620.1	KEGG: ctc:CTC00666 hypothetical protein
YP_001512621.1	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gur:Gura_2679 multi-sensor signal transduction histidine kinase
YP_001512622.1	PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: drm:Dred_2001 two component, sigma54 specific, transcriptional regulator, fis family
YP_001512623.1	PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: csc:Csac_0414 methyltransferase type 11
YP_001512624.1	PFAM: zinc/iron permease; KEGG: ctc:CTC01320 GufA protein
YP_001512625.1	lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis
YP_001512626.1	PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: ajs:Ajs_2683 methyltransferase type 11
YP_001512627.1	PFAM: regulatory protein ArsR; KEGG: cth:Cthe_0245 transcriptional regulator, ArsR family
YP_001512628.1	PFAM: regulatory protein ArsR; KEGG: cpr:CPR_2290 transcription repressor smtb-like protein PAB0625
YP_001512629.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: csc:Csac_0477 heavy metal translocating P-type ATPase
YP_001512630.1	PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: csc:Csac_0668 hypothetical protein
YP_001512631.1	KEGG: gfo:GFO_1320 hypothetical protein
YP_001512632.1	PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: sep:SE0081 hypothetical protein
YP_001512633.1	PFAM: ABC-2 type transporter; KEGG: sen:SACE_0206 ABC-2 type transporter
YP_001512634.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tma:TM1403 putative antibiotic transport system ATP-binding protein
YP_001512635.1	Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription
YP_001512636.1	in Rhodopseudomonas palustris this protein confers resistance to arsenite; catalyzes the formation of a number of methylated intermediates from arsenite and SAM producing trimethylarsine
YP_001512637.1	KEGG: gur:Gura_3370 formate dehydrogenase family accessory protein FdhD
YP_001512638.1	PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: dsy:DSY4131 putative anaerobic dehydrogenase
YP_001512639.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dsy:DSY4132 putative oxidoreductase iron-sulfur subunit
YP_001512640.1	PFAM: cytoplasmic chaperone TorD family protein; KEGG: gur:Gura_0472 cytoplasmic chaperone TorD family protein
YP_001512641.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: chy:CHY_0869 iron-sulfur cluster-binding protein
YP_001512642.1	PFAM: MOSC domain containing protein; KEGG: cbo:CBO1938 molybdenum cofactor sulfurase
YP_001512643.1	TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes
YP_001512644.1	PFAM: molybdopterin binding domain; KEGG: chy:CHY_0621 molybdopterin-binding domain protein
YP_001512645.1	TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: chy:CHY_0867 putative molybdopterin biosynthesis MoeA protein
YP_001512646.1	TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: mta:Moth_1819 molybdopterin-guanine dinucleotide biosynthesis protein B
YP_001512647.1	TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; KEGG: tpt:Tpet_0921 phosphodiesterase, MJ0936 family
YP_001512648.1	PFAM: regulatory protein ArsR; transcriptional regulator TrmB; KEGG: ssp:SSP1604 putative transcriptional regulator
YP_001512649.1	PFAM: regulatory protein ArsR; KEGG: swo:Swol_0936 regulator of arsenical resistance
YP_001512650.1	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: tko:TK1064 predicted metallocofactor modifying protein, radical SAM superfamily
YP_001512651.1	PFAM: Arsenical resistance operon trans-acting repressor ArsD; KEGG: cbo:CBO0754 arsenical resistance operon trans-acting repressor
YP_001512652.1	KEGG: cbo:CBO0755 arsenical pump-driving ATPase; TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase; SMART: AAA ATPase
YP_001512654.1	PFAM: regulatory protein ArsR; KEGG: cbo:CBO0753 arsenical resistance operon repressor
YP_001512655.1	PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: cth:Cthe_1110 protein tyrosine phosphatase
YP_001512656.1	TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: cth:Cthe_1111 bile acid:sodium symporter
YP_001512657.1	SMART: Rhodanese domain protein; KEGG: cte:CT0514 hypothetical protein
YP_001512658.1	TIGRFAM: phosphate binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: gtn:GTNG_2397 phosphate-binding protein
YP_001512659.1	TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: nph:NP1980A ABC-type transport system permease protein II (probable substrate phosphate) 1
YP_001512660.1	TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sru:SRU_2295 phosphate ABC transporter, permease protein PstA
YP_001512661.1	KEGG: cbo:CBO2522 phosphate import ATP-binding protein; TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase
YP_001512662.1	TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: tte:TTE1627 phosphate uptake regulator
YP_001512663.1	PFAM: regulatory protein ArsR; KEGG: ssp:SSP1604 putative transcriptional regulator
YP_001512664.1	TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; KEGG: tpt:Tpet_0921 phosphodiesterase, MJ0936 family
YP_001512665.1	PFAM: permease; KEGG: dsy:DSY4678 hypothetical protein
YP_001512666.1	TIGRFAM: redox-active disulfide protein 2; KEGG: dsy:DSY4674 hypothetical protein
YP_001512669.1	KEGG: pth:PTH_0422 hypothetical protein
YP_001512671.1	KEGG: drm:Dred_0505 hypothetical protein
YP_001512672.1	PFAM: protein of unknown function DUF882; Peptidase M15A; KEGG: drm:Dred_0511 peptidase M15A
YP_001512673.1	KEGG: cpf:CPF_2597 hypothetical protein
YP_001512674.1	PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: fnu:FN1258 C4-dicarboxylate-binding protein
YP_001512675.1	PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: fnu:FN1257 C4-dicarboxylate transporter small subunit
YP_001512676.1	TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: fnu:FN1256 C4-dicarboxylate transporter large subunit
YP_001512677.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: fnu:FN1255 nagD protein
YP_001512678.1	PFAM: glycerol-3-phosphate responsive antiterminator; KEGG: cno:NT01CX_0613 glycerol uptake operon antiterminator regulatory protein
YP_001512679.1	PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: fnu:FN0183 glycerol-3-phosphate dehydrogenase
YP_001512680.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: fnu:FN0182 sarcosine oxidase alpha subunit
YP_001512681.1	PFAM: protein of unknown function DUF1667; KEGG: csc:Csac_0011 protein of unknown function DUF1667
YP_001512682.1	PFAM: MgtC/SapB transporter; KEGG: cth:Cthe_1919 MgtC/SapB transporter
YP_001512683.1	PFAM: GCN5-related N-acetyltransferase; KEGG: cno:NT01CX_0012 acetyltransferase, GNAT family
YP_001512685.1	KEGG: dsy:DSY4205 hypothetical protein
YP_001512686.1	Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates
YP_001512687.1	TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; KEGG: dsy:DSY0396 hypothetical protein
YP_001512690.1	PFAM: sodium/hydrogen exchanger; KEGG: cdf:CD0657 putative Na(+)/H(+) antiporter
YP_001512691.1	KEGG: sth:STH2523 conserved domain protein, histidine-rich
YP_001512692.1	PFAM: NUDIX hydrolase; KEGG: cac:CAC1006 MutT-like (NUDIX) hydrolase
YP_001512693.1	KEGG: drm:Dred_0592 hypothetical protein
YP_001512694.1	PFAM: beta-lactamase domain protein; KEGG: cno:NT01CX_0354 metallo-beta-lactamase superfamily protein
YP_001512695.1	KEGG: cpe:CPE0596 hypothetical protein
YP_001512696.1	PFAM: Phosphoglycerate mutase; KEGG: gka:GK1466 phosphoglycerate mutase
YP_001512697.1	KEGG: mem:Memar_0355 nitroreductase
YP_001512698.1	PFAM: creatinase; peptidase M24; KEGG: cno:NT01CX_1472 peptidase, M24 family protein
YP_001512699.1	KEGG: bha:BH2988 hypothetical protein
YP_001512700.1	KEGG: ctc:CTC01030 DNA-3-methyladenine glycosylase; TIGRFAM: DNA-3-methyladenine glycosylase; PFAM: methylpurine-DNA glycosylase (MPG)
YP_001512701.1	PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; ferredoxin-dependent glutamate synthase; KEGG: cdf:CD1263 putative FMN-dependent dehydrogenase
YP_001512702.1	PFAM: polysaccharide deacetylase; KEGG: cbo:CBO2775 probable polysaccharide deacetylase
YP_001512703.1	PFAM: Peptidoglycan-binding LysM; cell wall hydrolase SleB; KEGG: drm:Dred_2102 cell wall hydrolase, SleB
YP_001512704.1	KEGG: tte:TTE0833 Aspartate-semialdehyde dehydrogenase; TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region
YP_001512705.1	catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis
YP_001512706.1	catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis
YP_001512707.1	PFAM: sodium:dicarboxylate symporter; KEGG: drm:Dred_0908 sodium:dicarboxylate symporter
YP_001512708.1	TIGRFAM: oligoendopeptidase F; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; Oligopeptidase F; KEGG: tte:TTE1010 Oligoendopeptidase F
YP_001512712.1	PFAM: ATP-NAD/AcoX kinase; KEGG: cdf:CD1049 putative inorganic polyphosphate/ATP-NAD kinase
YP_001512713.1	KEGG: cdf:CD1060 putative pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase
YP_001512714.1	KEGG: cdf:CD1061 hypothetical protein
YP_001512715.1	KEGG: cac:CAC0955 ATP-dependent Zn protease; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; SMART: AAA ATPase
YP_001512716.1	TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: cbo:CBO1942 molybdopterin biosynthesis protein
YP_001512717.1	TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: cac:CAC2020 molybdopterin biosynthesis enzyme, MoeA, fused to molibdopterin-binding domain
YP_001512718.1	PFAM: MOSC domain containing protein; KEGG: cbo:CBO1938 molybdenum cofactor sulfurase
YP_001512719.1	PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: pth:PTH_1396 membrane protein
YP_001512720.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: GGDEF family protein
YP_001512721.1	KEGG: gtn:GTNG_0542 hypothetical protein
YP_001512722.1	PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: tte:TTE0835 ABC-type multidrug/protein/lipid transport system, ATPase component
YP_001512723.1	PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: tte:TTE0836 ABC-type multidrug/protein/lipid transport system, ATPase component
YP_001512724.1	KEGG: cac:CAC1617 hypothetical protein
YP_001512725.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: cth:Cthe_2689 transcriptional regulator, GntR family
YP_001512726.1	PFAM: diacylglycerol kinase catalytic region; KEGG: bca:BCE_0352 conserved hypothetical protein TIGR00147
YP_001512727.1	PFAM: regulatory protein MarR; KEGG: gtn:GTNG_2597 transcriptional regulator
YP_001512728.1	KEGG: cth:Cthe_0817 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; TPR repeat-containing protein; SMART: serine/threonine protein kinase; Tetratricopeptide domain protein
YP_001512729.1	catalyzes the degradation of histidine to urocanate and ammmonia
YP_001512730.1	catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway
YP_001512733.1	PFAM: protein of unknown function DUF896; KEGG: bha:BH2353 hypothetical protein
YP_001512734.1	PFAM: CheW domain protein; KEGG: chy:CHY_0966 chemotaxis protein CheW
YP_001512736.1	PFAM: ATP-binding region ATPase domain protein; Sensor DegS domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: cth:Cthe_1268 histidine kinase
YP_001512737.1	PFAM: regulatory protein LuxR; response regulator receiver; KEGG: cth:Cthe_1267 two component transcriptional regulator, LuxR family
YP_001512738.1	TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: chy:CHY_2418 DegV family protein
YP_001512739.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: cdf:CD1079 LysR-family transcriptional regulator
YP_001512740.1	PFAM: RelA/SpoT domain protein; KEGG: bha:BH1885 hypothetical protein
YP_001512741.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: cdf:CD2406 putative lipoprotein
YP_001512742.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: spa:M6_Spy0664 ABC transporter ATP-binding protein
YP_001512743.1	PFAM: protein of unknown function DUF214; KEGG: lin:lin0234 similar to membrane protein (putative ABC transporter component)
YP_001512744.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cbo:CBO0905 two component response regulator
YP_001512745.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: cbo:CBO0906 two component sensor kinase
YP_001512746.1	TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: cth:Cthe_0890 RNA polymerase, sigma-24 subunit, ECF subfamily
YP_001512747.1	KEGG: cth:Cthe_0889 putative transmembrane anti-sigma factor
YP_001512748.1	has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair
YP_001512749.1	KEGG: tte:TTE0875 dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase
YP_001512750.1	PFAM: Lytic transglycosylase catalytic; KEGG: cac:CAC1100 secreted protein, similar to catalytic domain of murein transglycosylase
YP_001512751.1	PFAM: extracellular solute-binding protein family 5; KEGG: tte:TTE0878 ABC-type dipeptide/oligopeptide/nickel transport systems, periplasmic components
YP_001512753.1	PFAM: formylmethionine deformylase; KEGG: cbo:CBO0876 peptide deformylase
YP_001512754.1	PFAM: Amidohydrolase 3; KEGG: btk:BT9727_4230 N-acyl-D-amino-acid deacylase family protein
YP_001512755.1	TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; KEGG: dsy:DSY1174 hypothetical protein
YP_001512756.1	PFAM: CheC domain protein; KEGG: dsy:DSY1175 hypothetical protein
YP_001512757.1	PFAM: aldo/keto reductase; KEGG: cdf:CD3191 putative oxidoreductase
YP_001512758.1	KEGG: cbo:CBO0467 membrane protein
YP_001512759.1	KEGG: amt:Amet_3105 ATPase
YP_001512760.1	PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: amt:Amet_3073 DEAD/DEAH box helicase domain protein
YP_001512761.1	KEGG: amt:Amet_3067 hypothetical protein
YP_001512762.1	KEGG: amt:Amet_3063 hypothetical protein
YP_001512763.1	PFAM: beta-lactamase domain protein; KEGG: amt:Amet_3062 beta-lactamase domain protein
YP_001512765.1	PFAM: ComEC/Rec2-related protein; KEGG: cth:Cthe_0606 DNA internalization-related competence protein ComEC/Rec2
YP_001512766.1	TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta; KEGG: cdf:CD2474 hypothetical protein
YP_001512767.1	binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase
YP_001512768.1	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
YP_001512769.1	PFAM: Stage II sporulation P family protein; KEGG: cdf:CD2469 putative stage II sporulation protein P
YP_001512771.1	binds to the ribosome on the universally-conserved alpha-sarcin loop
YP_001512772.1	KEGG: cth:Cthe_1325 putative oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_001512773.1	TIGRFAM: heat-inducible transcription repressor HrcA; PFAM: Negative regulator of class I heat shock protein; KEGG: cdf:CD2463 heat-inducible transcription repressor
YP_001512774.1	PFAM: GrpE protein; KEGG: cdf:CD2462 heat shock protein
YP_001512775.1	heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria
YP_001512776.1	TIGRFAM: chaperone protein DnaJ; PFAM: DnaJ central domain protein; heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: cdf:CD2460 chaperone protein
YP_001512777.1	methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype
YP_001512778.1	in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase
YP_001512779.1	KEGG: cdf:CD2448 putative radical SAM superfamily protein; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: deoxyribonuclease/rho motif-related TRAM; Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB
YP_001512780.1	PFAM: histidine triad (HIT) protein; KEGG: ctc:CTC02026 Hit family protein
YP_001512781.1	a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA
YP_001512782.1	KEGG: cdf:CD2446 putative tRNA binding protein
YP_001512783.1	PFAM: protein of unknown function DUF107; KEGG: bld:BLi02730 YqeZ
YP_001512784.1	PFAM: band 7 protein; KEGG: cth:Cthe_0858 protein of unknown function DUF1432
YP_001512786.1	PFAM: protein of unknown function DUF1429; KEGG: cth:Cthe_1073 protein of unknown function DUF1429
YP_001512787.1	PFAM: putative stage IV sporulation YqfD; KEGG: cth:Cthe_1072 putative stage IV sporulation YqfD
YP_001512788.1	PFAM: PhoH family protein; KEGG: cdf:CD2441a PhoH-like protein
YP_001512789.1	KEGG: tte:TTE0971 predicted membrane-associated HD superfamily hydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; metal-dependent phosphohydrolase 7TM intracellular region; metal-dependent phosphohydrolase 7TM extracellular region; SMART: metal-dependent phosphohydrolase HD region
YP_001512790.1	PFAM: protein of unknown function UPF0054; KEGG: cdf:CD2440 hypothetical protein
YP_001512791.1	PFAM: phosphoesterase PA-phosphatase related; diacylglycerol kinase; KEGG: tte:TTE0973 Diacylglycerol kinase
YP_001512792.1	KEGG: cth:Cthe_0155 hypothetical protein
YP_001512793.1	TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; KEGG: cpr:CPR_1988 cytidine deaminase
YP_001512794.1	Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome
YP_001512795.1	TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO; KEGG: cth:Cthe_1066 DNA repair protein RecO
YP_001512796.1	PFAM: ubiquitin-associated- domain-containing protein; KEGG: tte:TTE0977 hypothetical protein
YP_001512797.1	Catalyzes a two-step reaction, first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_001512798.1	PFAM: CBS domain containing protein; Helix-turn-helix type 11 domain protein; KEGG: tte:TTE0979 CBS domains
YP_001512799.1	PFAM: protein of unknown function DUF299; KEGG: drm:Dred_2470 protein of unknown function DUF299
YP_001512800.1	catalyzes the formation of phosphoenolpyruvate from pyruvate
YP_001512801.1	KEGG: bat:BAS0988 hypothetical protein
YP_001512803.1	PFAM: regulatory protein TetR; KEGG: cbo:CBO0620 TetR-family transcriptional regulator
YP_001512804.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bha:BH2121 hypothetical protein
YP_001512805.1	KEGG: cac:CAC0785 hypothetical protein
YP_001512806.1	KEGG: cbo:CBO0838 flavoredoxin
YP_001512807.1	PFAM: regulatory protein TetR; KEGG: blo:BL0153 probable TetR-like transcriptional regulator
YP_001512808.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cac:CAC0822 ABC transporter, ATP-binding protein
YP_001512809.1	PFAM: protein of unknown function DUF214; KEGG: msi:Msm_0856 antimicrobial peptide ABC transporter, permease component
YP_001512810.1	PFAM: secretion protein HlyD family protein; KEGG: ana:alr0445 HlyD family secretion protein
YP_001512811.1	PFAM: transcriptional regulator PadR family protein; KEGG: cpr:CPR_2060 transcriptional regulator, PadR family
YP_001512812.1	TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: chu:CHU_3423 chromate transporter, permease component
YP_001512813.1	KEGG: dsy:DSY1203 hypothetical protein
YP_001512814.1	KEGG: bld:BLi01581 YoaS
YP_001512815.1	PFAM: helix-turn-helix domain protein; KEGG: bld:BLi01580 YozG
YP_001512816.1	FAD/NAD(P)-binding domain
YP_001512817.1	KEGG: dsy:DSY3593 hypothetical protein
YP_001512818.1	dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate
YP_001512819.1	synthesizes RNA primers at the replication forks
YP_001512820.1	TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma-70; PFAM: sigma-70 1.1 domain protein; sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; KEGG: tte:TTE1755 DNA-directed RNA polymerase sigma subunits (sigma70/sigma32)
YP_001512822.1	PFAM: protein of unknown function DUF633; KEGG: cdf:CD1456 hypothetical protein
YP_001512823.1	PFAM: protein of unknown function DUF34; KEGG: cdf:CD1457 hypothetical protein
YP_001512824.1	PFAM: ribonuclease H; KEGG: aba:Acid345_0088 ribonuclease H
YP_001512825.1	PFAM: integrase family protein; KEGG: ban:BA0427 prophage LambdaBa04, site-specific recombinase, phage integrase family
YP_001512826.1	PFAM: protein of unknown function DUF955; KEGG: cac:CAC0548 predicted metal-dependent hydrolase
YP_001512827.1	PFAM: helix-turn-helix domain protein; KEGG: cac:CAC0549 predicted transcriptional regulator
YP_001512829.1	TIGRFAM: DNA binding domain, excisionase family
YP_001512831.1	PFAM: SNF2-related protein; helicase domain protein; KEGG: cth:Cthe_1653 SNF2-related protein
YP_001512832.1	KEGG: cth:Cthe_1652 hypothetical protein
YP_001512834.1	KEGG: cth:Cthe_1651 hypothetical protein
YP_001512835.1	PFAM: zinc finger CHC2-family protein; KEGG: drm:Dred_2613 superfamily II helicase and inactivated derivatives-like protein
YP_001512837.1	PFAM: VRR-NUC domain protein; KEGG: cth:Cthe_1646 hypothetical protein
YP_001512838.1	KEGG: amt:Amet_0843 hypothetical protein
YP_001512839.1	PFAM: B3/4 domain protein; KEGG: cac:CA_P0113 solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta
YP_001512840.1	PFAM: Radical SAM domain protein; KEGG: cbe:Cbei_3446 radical SAM domain protein
YP_001512843.1	KEGG: lre:Lreu_1038 hypothetical protein
YP_001512844.1	KEGG: amt:Amet_0858 hypothetical protein
YP_001512846.1	KEGG: pth:PTH_0422 hypothetical protein
YP_001512848.1	KEGG: drm:Dred_0505 hypothetical protein
YP_001512849.1	KEGG: cno:NT01CX_1424 5-methylcytosine-specific restriction enzyme B
YP_001512850.1	PFAM: protein of unknown function DUF882; Peptidase M15A; KEGG: drm:Dred_0511 peptidase M15A
YP_001512851.1	KEGG: mbu:Mbur_0793 hypothetical protein
YP_001512852.1	KEGG: bat:BAS2760 hypothetical protein
YP_001512853.1	PFAM: Erythromycin esterase; KEGG: hal:VNG1811G succinoglycan biosynthesis
YP_001512857.1	PFAM: heat shock protein DnaJ domain protein
YP_001512858.1	PFAM: DNA methylase N-4/N-6 domain protein; KEGG: msu:MS1026 adenine specific DNA methylase Mod
YP_001512859.1	PFAM: type III restriction protein res subunit; KEGG: bca:BCE_1019 type III restriction-modification system enzyme, R subunit
YP_001512860.1	KEGG: pin:Ping_0122 hypothetical protein
YP_001512861.1	PFAM: DNA repair protein RadC; KEGG: pth:PTH_2457 hypothetical DNA repair proteins
YP_001512862.1	PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: plu:plu1515 hypothetical protein
YP_001512863.1	PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: stl:stu0545 molybdopterin biosynthesis protein (HesA/MoeB/ThiF family protein), putative
YP_001512864.1	KEGG: bld:BLi03758 excinuclease ABC (subunit A); RBL05041; TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; SMART: AAA ATPase
YP_001512865.1	PFAM: glutamyl-tRNA reductase; Shikimate/quinate 5-dehydrogenase; KEGG: cth:Cthe_2525 glutamyl-tRNA reductase
YP_001512867.1	TIGRFAM: precorrin-6x reductase; siroheme synthase; PFAM: Precorrin-6x reductase CbiJ/CobK; KEGG: cth:Cthe_2526 precorrin-2 oxidase / ferrochelatase
YP_001512868.1	transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis
YP_001512869.1	TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Uroporphyrinogen III synthase HEM4; KEGG: cth:Cthe_2528 uroporphyrin-III C-methyltransferase
YP_001512870.1	catalyzes the formation of porphobilinogen from 5-aminolevulinate
YP_001512871.1	Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway
YP_001512872.1	PFAM: protein of unknown function DUF1121; KEGG: cac:CAC1623 uncharacterized protein, ortholog of Thermotoga (4980645)
YP_001512873.1	forms homopentamer; channel that opens in response to pressure or hypoosmotic shock
YP_001512875.1	PFAM: carbon starvation protein CstA; KEGG: cdf:CD2373 putative carbon starvation protein
YP_001512876.1	PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: ctc:CTC01979 transcriptional regulatory protein
YP_001512877.1	PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase internal region; 5TM Receptors of the LytS-YhcK type transmembrane region; KEGG: tte:TTE0871 Regulator of cell autolysis
YP_001512878.1	KEGG: chy:CHY_2653 putative restriction enzyme
YP_001512881.1	PFAM: NUDIX hydrolase; KEGG: ctc:CTC00982 phosphohydrolase (MutT family protein)
YP_001512882.1	PFAM: extracellular solute-binding protein family 5; KEGG: tte:TTE2522 ABC-type dipeptide/oligopeptide/nickel transport systems, periplasmic components
YP_001512883.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cac:CAC0177 oligopeptide transport permease protein
YP_001512884.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cpr:CPR_2256 oligopeptide ABC transporter, permease component
YP_001512885.1	KEGG: cpr:CPR_2255 oligopeptide ABC transporter, ATPase component; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase
YP_001512886.1	KEGG: cpr:CPR_2254 oligopeptide ABC transporter, ATPase component; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase
YP_001512887.1	PFAM: MaoC domain protein dehydratase; KEGG: tte:TTE0551 predicted acyl dehydratase
YP_001512888.1	PFAM: extracellular solute-binding protein family 5; KEGG: fnu:FN0396 dipeptide-binding protein
YP_001512889.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: fnu:FN0397 dipeptide transport system permease protein dppB
YP_001512890.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: fnu:FN0398 dipeptide transport system permease protein dppC
YP_001512891.1	KEGG: fnu:FN0399 dipeptide transport ATP-binding protein dppD; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase
YP_001512892.1	KEGG: fnu:FN0400 dipeptide transport ATP-binding protein dppF; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase
YP_001512893.1	TIGRFAM: ATP--cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: lwe:lwe1122 ATP:cob(I)alamin adenosyltransferase protein PduO, putative
YP_001512894.1	KEGG: tte:TTE2394 hypoxanthine-guanine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase
YP_001512897.1	catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis
YP_001512898.1	PFAM: 3-dehydroquinate synthase; KEGG: tte:TTE1011 3-dehydroquinate synthetase
YP_001512899.1	TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); KEGG: bha:BH1667 5-enolpyruvoylshikimate-3-phosphate synthase
YP_001512900.1	PFAM: Propanediol utilization protein; KEGG: cdf:CD2683 putative propanediol utilization protein
YP_001512901.1	catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate
YP_001512902.1	KEGG: lsa:LSA0870 hypothetical protein
YP_001512903.1	PFAM: NADPH-dependent FMN reductase; KEGG: det:DET1371 NADPH-dependent FMN reductase
YP_001512904.1	TIGRFAM: GTP-binding protein YchF; PFAM: GTP-binding protein HSR1-related; Protein of unknown function DUF933; KEGG: cdf:CD2662 putative GTP-binding protein
YP_001512905.1	TIGRFAM: Sporulation lipoprotein YhcN/YlaJ; KEGG: ctc:CTC01534 hypothetical protein
YP_001512906.1	PFAM: peptidase M16 domain protein; KEGG: cdf:CD2661 probable peptidase
YP_001512907.1	PFAM: peptidase M16 domain protein; KEGG: cdf:CD2660 probable peptidase
YP_001512908.1	transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein
YP_001512910.1	MraZ; UPF0040; crystal structure shows similarity to AbrB
YP_001512911.1	TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: cdf:CD2658 S-adenosyl-methyltransferase
YP_001512912.1	TIGRFAM: cell division protein FtsL; KEGG: tte:TTE1652 hypothetical protein
YP_001512913.1	PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PASTA domain containing protein; KEGG: cdf:CD2656 stage V sporulation protein D (sporulation specific penicillin-binding protein)
YP_001512914.1	involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate
YP_001512915.1	TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: cth:Cthe_0977 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase
YP_001512916.1	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
YP_001512917.1	UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation
YP_001512918.1	TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: cdf:CD2652 cell division/stage V sporulation protein
YP_001512919.1	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis
YP_001512920.1	adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active
YP_001512921.1	PFAM: Polypeptide-transport-associated domain protein FtsQ-type; KEGG: drm:Dred_0679 polypeptide-transport-associated domain protein, FtsQ-type
YP_001512922.1	PFAM: protein of unknown function DUF881; KEGG: tte:TTE1642 hypothetical protein
YP_001512923.1	PFAM: protein of unknown function DUF881; KEGG: cdf:CD2648 hypothetical protein
YP_001512924.1	PFAM: protein of unknown function DUF1290; KEGG: tte:TTE1641 small basic protein
YP_001512925.1	TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ domain protein; KEGG: cth:Cthe_0445 cell division protein FtsZ
YP_001512926.1	PFAM: peptidase U4 sporulation factor SpoIIGA; KEGG: cth:Cthe_0446 peptidase U4, sporulation factor SpoIIGA
YP_001512927.1	sigma-29; sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed in the mother cell at the onset of sporulation
YP_001512928.1	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed after engulfment; this factor is involved in the transcription of small acid-soluble proteins involved in protecting the forespore chromatin
YP_001512929.1	TIGRFAM: Sporulation protein YlmC/YmxH; PFAM: PRC-barrel domain protein; KEGG: drm:Dred_0688 PRC-barrel domain protein
YP_001512930.1	PFAM: ATP-cone domain protein; KEGG: cth:Cthe_0450 ribonucleotide reductase regulator NrdR-like protein
YP_001512931.1	PFAM: protein of unknown function DUF152; KEGG: pth:PTH_1832 hypothetical protein
YP_001512932.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: tte:TTE1633 response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain
YP_001512933.1	KEGG: cth:Cthe_1393 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001512934.1	PFAM: protein of unknown function DUF1614; KEGG: tte:TTE1626 hypothetical protein
YP_001512935.1	PFAM: Stage II sporulation P family protein; KEGG: tte:TTE1625 stage II sporulation protein P
YP_001512937.1	KEGG: tte:TTE1621 hypothetical protein
YP_001512938.1	PFAM: protein of unknown function DUF512; KEGG: cdf:CD2633 hypothetical protein
YP_001512939.1	EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains
YP_001512940.1	PFAM: protein of unknown function DUF205; KEGG: cdf:CD2631 hypothetical protein
YP_001512941.1	PFAM: UDP-glucose/GDP-mannose dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE domain protein; KEGG: cdf:CD2630 glycerol-3-phosphate dehydrogenase (NAD(P)+)
YP_001512942.1	TIGRFAM: Sporulation stage IV protein A; KEGG: cth:Cthe_1021 stage IV sporulation protein A
YP_001512943.1	PFAM: TPR repeat-containing protein; Sel1 domain protein repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ctc:CTC01770 conserved protein, tetratricopeptide repeat family protein
YP_001512944.1	KEGG: dsy:DSY0955 hypothetical protein
YP_001512946.1	KEGG: cth:Cthe_0793 hypothetical protein
YP_001512947.1	PFAM: alanine racemase domain protein; KEGG: cdf:CD2623 putative alanine racemase
YP_001512948.1	PFAM: protein of unknown function DUF552; KEGG: pth:PTH_1827 hypothetical protein
YP_001512949.1	PFAM: protein of unknown function YGGT; KEGG: swo:Swol_0956 protein of unknown function YGGT
YP_001512950.1	PFAM: RNA-binding S4 domain protein; KEGG: cdf:CD2620 putative RNA-binding cell division protein
YP_001512951.1	PFAM: DivIVA family protein; KEGG: tte:TTE1596 Cell division initiation protein
YP_001512952.1	PFAM: purine or other phosphorylase family 1; KEGG: cdf:CD2611 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
YP_001512953.1	catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate
YP_001512954.1	KEGG: tte:TTE1573 hypothetical protein
YP_001512955.1	TIGRFAM: Sporulation protein YteA; KEGG: cbo:CBO1474 general stress protein
YP_001512956.1	lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis
YP_001512957.1	KEGG: cbo:CBO1476 ribosomal large subunit pseudouridine synthase; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase
YP_001512958.1	PFAM: phosphoribosyltransferase; KEGG: cdf:CD2595 PyrR bifunctional protein
YP_001512959.1	PFAM: protein of unknown function DUF814; Fibronectin-binding A domain protein; KEGG: cdf:CD2592 fibronectin-binding protein
YP_001512960.1	involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate
YP_001512961.1	PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: cth:Cthe_1317 hypothetical protein
YP_001512962.1	PFAM: protein of unknown function DUF370; KEGG: cno:NT01CX_2250 hypothetical UPF0296 protein
YP_001512963.1	Essential for recycling GMP and indirectly, cGMP
YP_001512964.1	Promotes RNA polymerase assembly; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
YP_001512965.1	KEGG: cdf:CD2587 coenzyme A biosynthesis bifunctional protein; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein
YP_001512966.1	KEGG: cdf:CD2586 putative primosomal protein N'; TIGRFAM: primosomal protein N'; PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases
YP_001512967.1	cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+)
YP_001512968.1	TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: cdf:CD2584 methionyl-tRNA formyltransferase
YP_001512969.1	PFAM: protein of unknown function DUF116; KEGG: cdf:CD2583 hypothetical protein
YP_001512970.1	PFAM: peptidase membrane zinc metallopeptidase putative; KEGG: cdf:CD2582 putative membrane-associated neutral zinc metallopeptidase
YP_001512971.1	TIGRFAM: sun protein; transcription antitermination factor NusB; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: cth:Cthe_0571 sun protein
YP_001512972.1	23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance
YP_001512973.1	PFAM: Stage II sporulation E family protein; Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: tte:TTE1501 protein serine/threonine phosphatases
YP_001512974.1	PFAM: protein kinase; tyrosine protein kinase; PASTA domain containing protein; SMART: serine/threonine protein kinase; KEGG: tte:TTE1500 serine/threonine protein kinase
YP_001512975.1	TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC; KEGG: cdf:CD2576 putative ATP/GTP-binding protein
YP_001512976.1	PFAM: ribulose-phosphate 3-epimerase; KEGG: cdf:CD2575 ribulose-phosphate 3-epimerase
YP_001512977.1	TIGRFAM: thiamine pyrophosphokinase; PFAM: Thiamin pyrophosphokinase catalytic region; KEGG: cth:Cthe_0577 thiamine pyrophosphokinase
YP_001512978.1	required for 70S ribosome assembly
YP_001512979.1	PFAM: protein of unknown function DUF322; KEGG: cbo:CBO2498 hypothetical protein
YP_001512980.1	PFAM: Dak phosphatase; KEGG: cdf:CD2561 putative phosphatase
YP_001512981.1	catalyzes branch migration in Holliday junction intermediates
YP_001512982.1	TIGRFAM: putative methyltransferase; PFAM: conserved hypothetical protein; KEGG: cdf:CD2559 hypothetical protein
YP_001512983.1	Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA
YP_001512984.1	KEGG: tte:TTE1485 archaeal/vacuolar-type H+-ATPase subunit H
YP_001512985.1	TIGRFAM: Sporulation integral membrane protein YlbJ; PFAM: nucleoside recognition domain protein; KEGG: drm:Dred_2080 nucleoside recognition domain protein
YP_001512986.1	PFAM: protein of unknown function DUF795; KEGG: cdf:CD1174 hypothetical protein
YP_001512987.1	AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA
YP_001512988.1	PFAM: protein of unknown function DUF177; KEGG: cdf:CD1176 hypothetical protein
YP_001512989.1	some L32 proteins have zinc finger motifs consisting of CXXC while others do not
YP_001512990.1	negative regulator of genes involved in fatty acid and phospholipid biosynthesis for gram positive bacteria
YP_001512991.1	involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY
YP_001512992.1	FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs
YP_001512993.1	PFAM: 2-nitropropane dioxygenase NPD; KEGG: tte:TTE1474 dioxygenases related to 2-nitropropane dioxygenase
YP_001512994.1	TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: tte:TTE1473 (acyl-carrier-protein) S-malonyltransferase
YP_001512995.1	TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bca:BCE_3893 3-ketoacyl-(acyl-carrier-protein) reductase
YP_001512996.1	TIGRFAM: acyl carrier protein; PFAM: phosphopantetheine-binding; KEGG: cdf:CD1183 acyl carrier protein
YP_001512997.1	PFAM: Beta-ketoacyl synthase; KEGG: tte:TTE1470 3-oxoacyl-(acyl-carrier-protein) synthase
YP_001512998.1	cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity
YP_001512999.1	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cdf:CD1249 radical SAM-superfamily protein
YP_001513000.1	TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein; KEGG: cth:Cthe_0927 chromosome segregation protein SMC
YP_001513001.1	KEGG: cdf:CD1251 putative signal recognition particle; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase
YP_001513002.1	PFAM: Bacterio-opsin activator HTH domain protein; putative helix-turn-helix protein YlxM/p13 family protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: cdf:CD1251A hypothetical protein
YP_001513003.1	KEGG: cth:Cthe_0770 signal recognition particle protein; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase
YP_001513004.1	binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity
YP_001513005.1	KEGG: csc:Csac_2156 RNA-binding protein (contains KH domain)-like protein
YP_001513006.1	Essential for efficient processing of 16S rRNA
YP_001513007.1	methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA
YP_001513008.1	this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
YP_001513009.1	PFAM: GTP-binding protein HSR1-related; KEGG: cdf:CD1258 putative GTPase
YP_001513010.1	PFAM: ribonuclease HII/HIII; KEGG: spi:MGAS10750_Spy1032 ribonuclease HII
YP_001513011.1	PFAM: protein of unknown function UPF0102; KEGG: tte:TTE1452 predicted endonuclease distantly related to archaeal Holliday junction resolvase
YP_001513012.1	KEGG: tte:TTE1455 predicted ATPase with chaperone activity; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_001513013.1	TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: tte:TTE1450 predicted Rossmann-fold nucleotide-binding protein involved in DNA uptake
YP_001513014.1	KEGG: cdf:CD1274 DNA topoisomerase I; TIGRFAM: DNA topoisomerase I; PFAM: TOPRIM domain protein; DNA topoisomerase type IA central domain protein; DNA topoisomerase type IA zn finger domain protein; SMART: DNA topoisomerase I ATP-binding; DNA topoisomerase I DNA-binding; Toprim sub domain protein
YP_001513015.1	CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase (By similarity). It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
YP_001513016.1	TIGRFAM: flagellar basal-body rod protein FlgB; PFAM: flagellar basal body rod protein; KEGG: tte:TTE1445 flagellar basal body protein
YP_001513017.1	TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: cth:Cthe_0463 flagellar basal-body rod protein FlgC
YP_001513018.1	forms a junction between the M-ring and FlgB during flagella biosynthesis
YP_001513019.1	TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring domain protein; KEGG: tte:TTE1442 flagellar biosynthesis/type III secretory pathway lipoprotein
YP_001513020.1	One of three proteins involved in switching the direction of the flagellar rotation
YP_001513021.1	PFAM: flagellar assembly protein FliH; KEGG: tte:TTE1440 flagellar biosynthesis/type III secretory pathway protein
YP_001513022.1	KEGG: cth:Cthe_0468 flagellar protein export ATPase FliI; TIGRFAM: ATPase, FliI/YscN family; flagellar protein export ATPase FliI; type III secretion apparatus H+-transporting two-sector ATPase; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SMART: AAA ATPase
YP_001513023.1	TIGRFAM: flagellar export protein FliJ; KEGG: cth:Cthe_0469 flagellar export protein FliJ
YP_001513024.1	KEGG: ehi:388.t00006 hypothetical protein Pfam: PH DUF1090 MAP7 DUF904 DUF1410 UVR PROSITE: GLU_RICH LYS_RICH PH_DOMAIN
YP_001513025.1	PFAM: flagellar hook-length control protein; KEGG: cth:Cthe_0471 flagellar hook-length control protein
YP_001513026.1	PFAM: flagellar hook capping protein; KEGG: dvl:Dvul_1635 flagellar hook capping protein
YP_001513027.1	TIGRFAM: flagellar operon protein; KEGG: cth:Cthe_0473 flagellar operon protein
YP_001513028.1	PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; KEGG: cth:Cthe_0474 protein of unknown function DUF1078-like protein
YP_001513029.1	PFAM: flagellar FlbD family protein; KEGG: tte:TTE1432 uncharacterized protein, possibly involved in motility
YP_001513030.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: dde:Dde_3589 chemotaxis protein MotA
YP_001513031.1	PFAM: OmpA/MotB domain protein; KEGG: mta:Moth_0782 OmpA/MotB
YP_001513032.1	PFAM: flagellar basal body-associated protein FliL; KEGG: tte:TTE1431 flagellar basal body-associated protein
YP_001513033.1	One of three proteins involved in switching the direction of the flagellar rotation
YP_001513034.1	PFAM: response regulator receiver; KEGG: csc:Csac_1271 response regulator receiver protein
YP_001513035.1	KEGG: amt:Amet_2708 hypothetical protein
YP_001513036.1	KEGG: amt:Amet_2707 flagellar biosynthetic protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein
YP_001513037.1	TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3; KEGG: amt:Amet_2706 flagellar biosynthetic protein FliQ
YP_001513038.1	FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus
YP_001513039.1	TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter; KEGG: amt:Amet_2704 flagellar biosynthetic protein FlhB
YP_001513040.1	TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein; KEGG: amt:Amet_2703 flagellar biosynthesis protein FlhA
YP_001513041.1	PFAM: GTP-binding signal recognition particle SRP54 G- domain; SMART: AAA ATPase; KEGG: amt:Amet_2702 GTP-binding signal recognition particle SRP54, G-domain
YP_001513042.1	PFAM: Cobyrinic acid ac-diamide synthase; KEGG: amt:Amet_2701 cobyrinic acid a,c-diamide synthase
YP_001513043.1	PFAM: type IV pilus assembly PilZ; KEGG: amt:Amet_2700 type IV pilus assembly PilZ
YP_001513044.1	PFAM: CheB methylesterase; response regulator receiver; KEGG: amt:Amet_2699 response regulator receiver modulated CheB methylesterase
YP_001513045.1	PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; P2 response regulator binding domain protein; KEGG: cth:Cthe_0490 CheA signal transduction histidine kinases
YP_001513046.1	PFAM: CheW domain protein; KEGG: cth:Cthe_0491 CheW protein
YP_001513047.1	PFAM: CheC domain protein; KEGG: cth:Cthe_0492 CheC, inhibitor of MCP methylation
YP_001513048.1	catalyzes the conversion of glutamine residues to glutamate on methyl-accepting chemotaxis receptors
YP_001513049.1	KEGG: lbl:LBL_1838 RNA polymerase sigma subunit; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma-70; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2
YP_001513050.1	PFAM: protein of unknown function DUF342; KEGG: cth:Cthe_0498 protein of unknown function DUF342
YP_001513052.1	one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit
YP_001513053.1	EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu
YP_001513054.1	Catalyzes the phosphorylation of UMP to UDP
YP_001513055.1	Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs
YP_001513056.1	KEGG: cno:NT01CX_2145 undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase
YP_001513057.1	PFAM: phosphatidate cytidylyltransferase; KEGG: tte:TTE1403 CDP-diglyceride synthetase
YP_001513058.1	catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate
YP_001513059.1	KEGG: cdf:CD2129 putative membrane-associated protease; TIGRFAM: putative membrane-associated zinc metalloprotease; PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein
YP_001513060.1	KEGG: cdf:CD2128 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; PFAM: IspG family protein
YP_001513061.1	PFAM: glycosyl transferase family 2; KEGG: tte:TTE1399 glycosyltransferase involved in cell wall biogenesis
YP_001513062.1	KEGG: cth:Cthe_0996 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, epsilon subunit; DNA polymerase III, alpha subunit; PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; Exonuclease RNase T and DNA polymerase III; SMART: phosphoesterase PHP domain protein; Exonuclease
YP_001513063.1	PFAM: protein of unknown function DUF150; KEGG: cth:Cthe_0995 protein of unknown function DUF150
YP_001513064.1	KEGG: drm:Dred_1960 NusA antitermination factor; TIGRFAM: transcription termination factor NusA; PFAM: RNA binding S1 domain protein; NusA domain protein; SMART: KH domain protein
YP_001513065.1	PFAM: protein of unknown function DUF448; KEGG: cth:Cthe_0993 protein of unknown function DUF448
YP_001513066.1	PFAM: ribosomal protein L7Ae/L30e/S12e/Gadd45; KEGG: cdf:CD1308 putative ribosomal protein
YP_001513067.1	Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
YP_001513068.1	associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock
YP_001513069.1	PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: cth:Cthe_0989 phosphoesterase, RecJ-like protein
YP_001513070.1	catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs
YP_001513071.1	TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase / FAD synthetase; KEGG: cth:Cthe_0987 riboflavin biosynthesis protein RibF
YP_001513072.1	primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence
YP_001513073.1	KEGG: cdf:CD1318 polyribonucleotide nucleotidyltransferase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH type 1 domain protein; SMART: KH domain protein
YP_001513074.1	PFAM: polysaccharide deacetylase; KEGG: tte:TTE1386 predicted xylanase/chitin deacetylase
YP_001513075.1	PFAM: peptidase M16 domain protein; KEGG: cth:Cthe_0419 peptidase M16-like protein
YP_001513076.1	TIGRFAM: Sporulation protein YlmC/YmxH; PFAM: PRC-barrel domain protein; KEGG: tte:TTE1383 hypothetical protein
YP_001513077.1	PFAM: peptidase S14 ClpP; KEGG: tte:TTE1381 protease subunit of ATP-dependent Clp protease
YP_001513078.1	PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: cdf:CD1324 putative DNA translocase
YP_001513079.1	catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
YP_001513080.1	TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: tte:TTE1376 Phosphatidylglycerophosphate synthase
YP_001513081.1	KEGG: cth:Cthe_1050 RecA protein; TIGRFAM: recA protein; PFAM: RecA domain protein; SMART: AAA ATPase
YP_001513082.1	protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP
YP_001513083.1	PFAM: Stage V sporulation protein S; KEGG: gtn:GTNG_1153 stage V sporulation protein S
YP_001513084.1	PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: tte:TTE1369 predicted metal-dependent phosphoesterases (PHP family)
YP_001513085.1	PFAM: aminotransferase class I and II; KEGG: tte:TTE1368 PLP-dependent aminotransferases
YP_001513086.1	PFAM: S-layer domain protein; glycoside hydrolase family 18; SMART: chitinase II; KEGG: bsu:BG13319 similar to chitinase
YP_001513087.1	PFAM: integrase family protein; KEGG: cdf:CD1932 putative tyrosine recombinase
YP_001513088.1	Represses a number of genes involved in the response to DNA damage
YP_001513089.1	PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; Aluminium resistance family protein; KEGG: cdf:CD1973 hypothetical protein
YP_001513090.1	TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core; KEGG: chy:CHY_1393 hfq protein
YP_001513091.1	IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity
YP_001513092.1	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
YP_001513093.1	This protein performs the mismatch recognition step during the DNA repair process
YP_001513094.1	KEGG: cdf:CD1986 putative radical SAM protein; TIGRFAM: RNA modification enzyme, MiaB family; tRNA-i(6)A37 thiotransferase enzyme MiaB; PFAM: deoxyribonuclease/rho motif-related TRAM; Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB
YP_001513095.1	PFAM: regulatory protein MerR; KEGG: cth:Cthe_0804 transcriptional regulator, MerR family
YP_001513096.1	PFAM: peptidase M20; peptidase M42 family protein; KEGG: tte:TTE0443 Cellulase M and related proteins
YP_001513097.1	PFAM: peptidase M18 aminopeptidase I; peptidase M42 family protein; KEGG: tte:TTE0442 Cellulase M and related proteins
YP_001513098.1	PFAM: peptidase M18 aminopeptidase I; peptidase M20; peptidase M42 family protein; KEGG: tte:TTE0441 Cellulase M and related proteins
YP_001513099.1	PFAM: MCP methyltransferase CheR-type; KEGG: cth:Cthe_0717 MCP methyltransferase, CheR-type
YP_001513100.1	PFAM: RNA binding S1 domain protein; KEGG: cbo:CBO1159 30S ribosomal protein S1
YP_001513101.1	catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway
YP_001513102.1	TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; KEGG: tte:TTE1351 1-acyl-sn-glycerol-3-phosphate acyltransferase
YP_001513103.1	KEGG: cdf:CD1816 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region
YP_001513104.1	TIGRFAM: chorismate mutase; PFAM: Chorismate mutase of the AroH class; KEGG: cth:Cthe_0711 chorismate mutase
YP_001513105.1	PFAM: glucose-inhibited division protein A; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cth:Cthe_0708 FAD dependent oxidoreductase
YP_001513106.1	PFAM: Phosphoglycerate mutase; KEGG: cdf:CD1814 putative phosphoglycerate mutase
YP_001513107.1	PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: cbo:CBO1812 RpiR-family transcriptional regulator
YP_001513108.1	KEGG: tte:TTE1211 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit; TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase
YP_001513109.1	catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin
YP_001513110.1	PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: pth:PTH_0847 pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
YP_001513111.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: tte:TTE1339 ferredoxin 2
YP_001513112.1	KEGG: cth:Cthe_0704 hypothetical protein
YP_001513113.1	Converts oxaloacetate to phosphoenolpyruvate using ATP as an energy source
YP_001513114.1	PFAM: putative rRNA methylase; KEGG: cno:NT01CX_0339 putative rRNA methylase
YP_001513116.1	PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: cno:NT01CX_2092 ribosomal large subunit pseudouridine synthase B
YP_001513117.1	PFAM: glucose-inhibited division protein A; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; KEGG: cpe:CPE1799 hypothetical protein
YP_001513118.1	KEGG: tte:TTE1329 hypothetical protein
YP_001513119.1	PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: tte:TTE1328 D-alanyl-D-alanine carboxypeptidase
YP_001513120.1	KEGG: gvi:glr4396 unknown protein
YP_001513121.1	TIGRFAM: Sporulation protein YtfJ; KEGG: tte:TTE1327 hypothetical protein
YP_001513122.1	KEGG: gtn:GTNG_2692 BH3196-like protein
YP_001513123.1	PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: cdf:CD1023 putative transcriptional regulator
YP_001513124.1	TIGRFAM: putative agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: cpr:CPR_0516 agmatinase
YP_001513125.1	TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: cdf:CD1296 segregation and condensation protein B
YP_001513126.1	PFAM: chromosome segregation and condensation protein ScpA; KEGG: cac:CAC2061 segregation and condensation protein A
YP_001513127.1	PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: cdf:CD1291 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein)
YP_001513128.1	KEGG: cno:NT01CX_1499 pyrimidine-nucleoside phosphorylase; TIGRFAM: pyrimidine-nucleoside phosphorylase; PFAM: glycosyl transferase family 3; Pyrimidine nucleoside phosphorylase domain
YP_001513129.1	catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation
YP_001513130.1	TIGRFAM: inosine guanosine and xanthosine phosphorylase family; purine nucleoside phosphorylase I, inosine and guanosine-specific; PFAM: purine phosphorylase family 2; KEGG: btl:BALH_3704 purine-nucleoside phosphorylase
YP_001513131.1	catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose
YP_001513132.1	TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: cth:Cthe_0676 tyrosine recombinase XerD
YP_001513133.1	TIGRFAM: Sporulation stage II protein M; PFAM: protein of unknown function DUF95 transmembrane; KEGG: gtn:GTNG_2249 stage II sporulation protein M
YP_001513134.1	PFAM: NUDIX hydrolase; KEGG: tte:TTE1310 NTP pyrophosphohydrolases including oxidative damage repair enzymes
YP_001513135.1	KEGG: drm:Dred_1093 hypothetical protein
YP_001513136.1	KEGG: cdf:CD1218 putative glycosyltransferase
YP_001513137.1	PFAM: glycosyl transferase family 2; KEGG: cdf:CD1217 putative glycosyltransferase
YP_001513138.1	KEGG: tte:TTE1306 hypothetical protein
YP_001513139.1	PFAM: Thiamin pyrophosphokinase catalytic region; KEGG: tte:TTE1305 hypothetical protein
YP_001513140.1	PFAM: regulatory protein RecX; KEGG: bce:BC0498 regulatory protein recX
YP_001513141.1	TIGRFAM: Sporulation response regulator Spo0A; PFAM: response regulator receiver; Sporulation initiation factor Spo0A; KEGG: cdf:CD1214 stage 0 sporulation protein A
YP_001513142.1	KEGG: tte:TTE1303 sporulation protein IVB; TIGRFAM: Peptidase S55 sporulation stage IV protein B; PFAM: peptidase S55 SpoIVB; SMART: PDZ/DHR/GLGF domain protein
YP_001513143.1	TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: tte:TTE1302 ATPases involved in DNA repair
YP_001513144.1	regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes
YP_001513145.1	TIGRFAM: hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4 domain protein; KEGG: cbo:CBO1880 methyltransferase
YP_001513146.1	TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: Transketolase central region; Transketolase domain protein; KEGG: tte:TTE1298 deoxyxylulose-5-phosphate synthase
YP_001513147.1	PFAM: acid phosphatase/vanadium-dependent haloperoxidase related; KEGG: csc:Csac_1851 acid phosphatase/vanadium-dependent haloperoxidase related
YP_001513148.1	PFAM: Polyprenyl synthetase; KEGG: cdf:CD1205 geranyltranstransferase
YP_001513149.1	TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII small subunit; KEGG: gme:Gmet_1936 exonuclease VII, small subunit
YP_001513150.1	bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides
YP_001513151.1	PFAM: peptidase M22 glycoprotease; KEGG: mta:Moth_1520 O-sialoglycoprotein endopeptidase
YP_001513152.1	TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: cth:Cthe_0834 NusB antitermination factor
YP_001513153.1	PFAM: protein of unknown function DUF322; KEGG: tte:TTE1291 hypothetical protein
YP_001513154.1	KEGG: cdf:CD1199 putative stage III sporulation protein AH
YP_001513155.1	TIGRFAM: Sporulation stage III protein AG; KEGG: cdf:CD1198 stage III sporulation protein AG
YP_001513156.1	TIGRFAM: Sporulation stage III protein AF; KEGG: cth:Cthe_0840 hypothetical protein
YP_001513157.1	TIGRFAM: Sporulation stage III protein AE; KEGG: drm:Dred_1060 hypothetical protein
YP_001513158.1	TIGRFAM: Sporulation stage III protein AD; KEGG: cth:Cthe_0842 stage III sporulation protein AD
YP_001513159.1	PFAM: Stage III sporulation AC family protein; KEGG: tte:TTE1285 hypothetical protein
YP_001513160.1	TIGRFAM: Sporulation stage III protein AB; KEGG: drm:Dred_1057 stage III sporulation protein AB
YP_001513161.1	TIGRFAM: Sporulation stage III protein AA; SMART: AAA ATPase; KEGG: cth:Cthe_0845 stage III sporulation protein spoIIIAA
YP_001513162.1	KEGG: cdf:CD1247 hypothetical protein
YP_001513163.1	Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA
YP_001513164.1	PFAM: shikimate kinase; KEGG: tte:TTE1275 Shikimate kinase
YP_001513168.1	KEGG: btk:BT9727_3982 comG operon protein 4
YP_001513169.1	PFAM: S-layer domain protein; KEGG: cth:Cthe_2809 glycoside hydrolase, family 16
YP_001513170.1	PFAM: Peptidoglycan-binding LysM; KEGG: gka:GK3175 hypothetical protein
YP_001513171.1	KEGG: ssa:SSA_2308 hypothetical protein
YP_001513172.1	TIGRFAM: type IV pilus assembly protein PilM; KEGG: cpe:CPE2283 probable fimbrial assembly protein
YP_001513173.1	PFAM: peptidase A24A prepilin type IV; peptidase A24A domain protein; KEGG: tte:TTE1266 leader peptidase (prepilin peptidase) / N-methyltransferase
YP_001513174.1	KEGG: drm:Dred_1042 hypothetical protein
YP_001513175.1	PFAM: type II secretion system protein; KEGG: tte:TTE1264 General secretory pathway protein F
YP_001513176.1	KEGG: tte:TTE1263 predicted ATPases involved in pili biogenesis, PilT homologs; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: AAA ATPase
YP_001513177.1	PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; KEGG: tte:TTE1262 predicted ATPases involved in pili biogenesis, PilB homologs
YP_001513178.1	TIGRFAM: hydrolase, HAD-superfamily, subfamily IIIA; HAD superfamily (subfamily IIIA) phosphatase, TIGR01668; PFAM: HAD-superfamily phosphatase subfamily IIIA; KEGG: cth:Cthe_0855 HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
YP_001513179.1	KEGG: tte:TTE0491 flagellar protein
YP_001513180.1	PFAM: sigma-70 region 4 domain protein; KEGG: cth:Cthe_1012 RNA polymerase, sigma 28 subunit
YP_001513181.1	KEGG: cbo:CBO1426 spore coat protein
YP_001513182.1	KEGG: cac:CAC3318 hypothetical protein
YP_001513184.1	KEGG: bcz:pE33L466_0017 hypothetical protein
YP_001513186.1	KEGG: ape:APE_1221 hypothetical protein
YP_001513187.1	KEGG: bce:BC2886 hypothetical protein
YP_001513188.1	PFAM: Resolvase domain; Recombinase; KEGG: ctc:CTC01067 site-specific recombinase
YP_001513189.1	PFAM: sigma-70 region 2 domain protein; KEGG: tte:TTE1259 DNA-directed RNA polymerase sigma subunits (sigma70/sigma32)
YP_001513190.1	PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: cth:Cthe_1011 peptidoglycan glycosyltransferase
YP_001513191.1	TIGRFAM: uridine kinase; PFAM: phosphoribulokinase/uridine kinase; KEGG: cno:NT01CX_2269 uridine kinase
YP_001513192.1	PFAM: peptidase U32; KEGG: cdf:CD1228 putative protease
YP_001513193.1	PFAM: O-methyltransferase family 3; KEGG: cdf:CD1227 putative O-methyltransferase
YP_001513194.1	PFAM: protein of unknown function DUF340 membrane; KEGG: drm:Dred_2328 protein of unknown function DUF340, membrane
YP_001513195.1	KEGG: fnu:FN1082 hypothetical protein
YP_001513196.1	PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: tte:TTE1253 predicted hydrolase of the metallo-beta-lactamase superfamily
YP_001513197.1	PFAM: ferric-uptake regulator; KEGG: cac:CAC1682 ferric uptake regulation protein
YP_001513198.1	PFAM: protein of unknown function DUF1292; KEGG: cdf:CD1286 hypothetical protein
YP_001513199.1	PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; KEGG: cdf:CD1285 putative holliday junction resolvase
YP_001513200.1	KEGG: tte:TTE0101 hypothetical protein
YP_001513201.1	PFAM: protein of unknown function DUF965; KEGG: chy:CHY_0540 hypothetical protein
YP_001513202.1	Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_001513203.1	PFAM: protein of unknown function UPF0118; KEGG: pth:PTH_1059 predicted permease
YP_001513204.1	PFAM: PRC-barrel domain protein; KEGG: cth:Cthe_3197 PRC-barrel domain protein
YP_001513205.1	PFAM: nitrogen-fixing NifU domain protein; KEGG: cdf:CD1280 NifU-like protein
YP_001513206.1	PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: cdf:CD1279 cysteine desulfurase
YP_001513207.1	TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: tte:TTE1242 predicted transcriptional regulator
YP_001513208.1	PFAM: SCP-like extracellular; KEGG: sth:STH564 hypothetical protein
YP_001513209.1	KEGG: dsy:DSY4494 hypothetical protein
YP_001513210.1	KEGG: tte:TTE1676 hypothetical protein
YP_001513211.1	KEGG: cac:CAC2352 hypothetical protein
YP_001513212.1	molecular chaperone
YP_001513213.1	PFAM: helix-turn-helix domain protein; peptidase S24 S26A and S26B; KEGG: cac:CAC3247 predicted transcriptional regulator, LacI/xre family
YP_001513214.1	PFAM: UMUC domain protein DNA-repair protein; KEGG: gtn:GTNG_1543 DNA polymerase IV
YP_001513215.1	KEGG: gtn:GTNG_3423 transposition regulatory protein TnpC
YP_001513217.1	PFAM: GTPase EngC; KEGG: drm:Dred_0751 ribosome small subunit-dependent GTPase A
YP_001513218.1	KEGG: cno:NT01CX_2290 tRNA pseudouridine synthase A; TIGRFAM: tRNA pseudouridine synthase A; PFAM: tRNA pseudouridine synthase
YP_001513219.1	member of metallo-beta-lactamase family; the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase; in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not; associates with two zinc ions
YP_001513220.1	PFAM: protein of unknown function DUF1653; KEGG: pcr:Pcryo_2268 protein of unknown function DUF1653
YP_001513221.1	KEGG: dsy:DSY4235 hypothetical protein
YP_001513222.1	KEGG: cth:Cthe_3111 hypothetical protein
YP_001513223.1	KEGG: cbo:CBO2620 membrane protein
YP_001513224.1	PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: ctc:CTC01048 ATPase associated with chromosome architecture/replication
YP_001513226.1	KEGG: tte:TTE1676 hypothetical protein
YP_001513227.1	KEGG: tva:TVAG_088150 hypothetical protein
YP_001513229.1	PFAM: alanine racemase domain protein; KEGG: cbo:CBO1973 alanine racemase
YP_001513230.1	KEGG: cdf:CD0447 putative component of D-ornithine aminomutase
YP_001513231.1	PFAM: cobalamin B12-binding domain protein; D-Lysine 56-aminomutase alpha subunit; KEGG: cdf:CD0446 D-ornithine aminomutase E component
YP_001513232.1	KEGG: cdf:CD0445 D-ornithine aminomutase S component
YP_001513233.1	PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: cdf:CD0444 putative pyridoxal-phosphate dependent enzyme
YP_001513234.1	KEGG: cdf:CD0443 hypothetical protein
YP_001513235.1	PFAM: dihydrodipicolinate reductase; KEGG: cdf:CD0442 putative oxidoreductase
YP_001513236.1	catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate
YP_001513237.1	PFAM: protein of unknown function DUF1212; KEGG: csc:Csac_2062 protein of unknown function DUF1212
YP_001513238.1	KEGG: cdf:CD2728 hypothetical protein
YP_001513239.1	PFAM: GCN5-related N-acetyltransferase; KEGG: cac:CAC1416 predicted acetyltransferase
YP_001513240.1	catalyzes the removal of amino acids from the N termini of peptides
YP_001513241.1	KEGG: cth:Cthe_3040 hypothetical protein
YP_001513242.1	PFAM: Positive regulator of sigma(E) RseC/MucC; KEGG: cdf:CD2729 putative regulator of the sigma(E) factor
YP_001513243.1	PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: cac:CAC0908 dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis family 1
YP_001513244.1	KEGG: gtn:GTNG_2767 predicted diverged CheY-domain
YP_001513245.1	TIGRFAM: aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); GAD domain protein; tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: cdf:CD2739 putative aspartyl-tRNA synthetase
YP_001513246.1	catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG
YP_001513247.1	catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III
YP_001513248.1	PFAM: beta-lactamase domain protein; KEGG: drm:Dred_0735 beta-lactamase domain protein
YP_001513249.1	hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine
YP_001513250.1	KEGG: tte:TTE1195 Guanosine polyphosphate pyrophosphohydrolases/synthetases; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase HD region
YP_001513251.1	catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis
YP_001513252.1	TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: cac:CAC2232 SsDNA exonuclease, RecJ
YP_001513253.1	KEGG: ctc:CTC01682 ferripyochelin binding protein
YP_001513254.1	PFAM: Radical SAM domain protein; KEGG: cdf:CD2749 putative radical SAM family protein
YP_001513255.1	KEGG: cth:Cthe_0907 hypothetical protein
YP_001513256.1	KEGG: tte:TTE1185 hypothetical protein
YP_001513257.1	TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: cdf:CD2801 putative protein translocase subunit
YP_001513258.1	KEGG: cdf:CD2802 queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylase, various specificities; queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase
YP_001513259.1	TIGRFAM: S-adenosylmethionine--tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein; KEGG: cbo:CBO3069 S-adenosylmethionine:tRNA ribosyltransferase-isomerase
YP_001513260.1	TIGRFAM: SpoIID/LytB domain; PFAM: Stage II sporulation D domain protein; KEGG: cth:Cthe_0960 SpoIID/LytB domain containing protein
YP_001513261.1	promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration
YP_001513262.1	plays an essential role in ATP-dependent branch migration of the Holliday junction
YP_001513263.1	endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity
YP_001513264.1	PFAM: peptidase S16 lon domain protein; KEGG: cth:Cthe_1773 peptidase S16, lon-like protein
YP_001513265.1	KEGG: tte:TTE1137 hypothetical protein
YP_001513266.1	PFAM: BioY protein; KEGG: cdf:CD2971 putative biotin synthase
YP_001513267.1	PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: cpr:CPR_2299 ribosomal large subunit pseudouridine synthase F
YP_001513268.1	KEGG: cth:Cthe_2543 spore germination protein-like protein
YP_001513269.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: tte:TTE0482 sensory transduction histidine kinase
YP_001513270.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: tte:TTE0481 response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain
YP_001513271.1	TIGRFAM: selenocysteine-specific translation elongation factor; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 2; Elongation factor SelB winged helix 3; KEGG: cdf:CD2493 selenocysteine-specific elongation factor
YP_001513272.1	catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis
YP_001513273.1	TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: ppr:PBPRB1320 putative sodium/alanine symporter
YP_001513274.1	Contains selenocysteine; TIGRFAM: selenide, water dikinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: cpf:CPF_2374 selenide, water dikinase
YP_001513275.1	KEGG: csc:Csac_1821 competence protein ComEA helix-hairpin-helix repeat protein; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; PFAM: helix-hairpin-helix motif; SMART: Helix-hairpin-helix DNA-binding class 1
YP_001513276.1	PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: cdf:CD2498 D-alanyl-D-alanine carboxypeptidase (putative sporulation-specific penicillin-binding protein)
YP_001513277.1	KEGG: tte:TTE1009 L-serine deaminase; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, alpha subunit; PFAM: serine dehydratase alpha chain
YP_001513278.1	KEGG: tte:TTE1008 L-serine deaminase; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, beta subunit; PFAM: amino acid-binding ACT domain protein; serine dehydratase beta chain
YP_001513279.1	TIGRFAM: putative endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: cdf:CD2513 putative translation inhibitor endoribonuclease
YP_001513280.1	PFAM: YheO domain protein; KEGG: tte:TTE0922 hypothetical protein
YP_001513281.1	TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: cth:Cthe_1238 iojap-like protein
YP_001513282.1	TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: drm:Dred_3112 cell envelope-related transcriptional attenuator
YP_001513283.1	KEGG: cpr:CPR_2091 HD domain protein; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region
YP_001513284.1	KEGG: tte:TTE0918 nicotinate-nucleotide adenylyltransferase; TIGRFAM: cytidyltransferase-related domain; nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase
YP_001513285.1	PFAM: protein of unknown function UPF0044; KEGG: cdf:CD1165 hypothetical protein
YP_001513286.1	TIGRFAM: small GTP-binding protein; GTP-binding protein Obg/CgtA; PFAM: GTP-binding protein HSR1-related; GTP1/OBG sub domain protein; GTP1/OBG domain protein; KEGG: cdf:CD1164 Spo0B-associated GTP-binding protein
YP_001513287.1	involved in the peptidyltransferase reaction during translation
YP_001513288.1	PFAM: protein of unknown function DUF464; KEGG: tte:TTE0914 predicted ribosomal protein
YP_001513289.1	PFAM: ribosomal protein L21; KEGG: cdf:CD1161 50S ribosomal protein L21
YP_001513290.1	TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: cth:Cthe_0158 ribonuclease, Rne/Rng family
YP_001513291.1	KEGG: cdf:CD1159 hypothetical protein
YP_001513292.1	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cth:Cthe_0156 radical SAM
YP_001513293.1	PFAM: peptidase M50; KEGG: drm:Dred_2539 peptidase M50
YP_001513294.1	PFAM: peptidase M23B; KEGG: tte:TTE0907 membrane proteins related to metalloendopeptidase
YP_001513295.1	works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell
YP_001513296.1	TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid ac-diamide synthase; KEGG: dsy:DSY3174 hypothetical protein
YP_001513297.1	TIGRFAM: septum site-determining protein MinC; PFAM: Septum formation inhibitor MinC; KEGG: cth:Cthe_0092 septum site-determining protein MinC
YP_001513298.1	PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: cdf:CD1148 putative penicillin-binding protein
YP_001513299.1	KEGG: drm:Dred_2546 hypothetical protein
YP_001513300.1	in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall
YP_001513301.1	functions in MreBCD complex in some organisms
YP_001513302.1	Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase
YP_001513303.1	TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: cth:Cthe_0087 maf protein
YP_001513305.1	PFAM: Heptaprenyl diphosphate synthase component I; KEGG: cbo:CBO0375 membrane protein
YP_001513306.1	TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Fe-S cluster domain protein; KEGG: cdf:CD1142 electron transport complex protein
YP_001513307.1	TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; PFAM: RnfA-Nqr electron transport subunit; KEGG: cdf:CD1141 electron transport complex protein
YP_001513308.1	TIGRFAM: electron transport complex, RnfABCDGE type, E subunit; PFAM: RnfA-Nqr electron transport subunit; KEGG: cdf:CD1140 electron transport complex protein
YP_001513309.1	TIGRFAM: electron transport complex, RnfABCDGE type, G subunit; PFAM: FMN-binding domain protein; KEGG: cbo:CBO0370 electron transport complex protein
YP_001513310.1	TIGRFAM: electron transport complex, RnfABCDGE type, D subunit; PFAM: NQR2 and RnfD family protein; KEGG: cdf:CD1138 electron transport complex protein
YP_001513311.1	TIGRFAM: electron transport complex, RnfABCDGE type, C subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: cdf:CD1137 electron transport complex protein
YP_001513312.1	KEGG: cdf:CD1136 hypothetical protein
YP_001513313.1	PFAM: NLP/P60 protein; SH3 domain protein; Variant SH3 domain protein; SH3 type 3 domain protein; KEGG: tte:TTE0880 cell wall-associated hydrolase (invasion-associated proteins)
YP_001513314.1	PFAM: protein of unknown function DUF28; KEGG: cdf:CD0795 hypothetical protein
YP_001513315.1	TIGRFAM: NAD+ synthetase; PFAM: NAD synthase; KEGG: amt:Amet_2234 NAD+ synthetase
YP_001513316.1	KEGG: amt:Amet_2232 permease
YP_001513317.1	KEGG: amt:Amet_2231 conserved hypothetical protein
YP_001513318.1	PFAM: CoA-binding domain protein; KEGG: amt:Amet_2230 CoA-binding domain protein
YP_001513319.1	PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: amt:Amet_2229 protein of unknown function UPF0029
YP_001513320.1	PFAM: NUDIX hydrolase; KEGG: amt:Amet_2228 NUDIX hydrolase
YP_001513321.1	PFAM: PBS lyase HEAT domain protein repeat-containing protein; KEGG: amt:Amet_2226 PBS lyase heat domain protein repeat-containing protein
YP_001513322.1	PFAM: GTP-binding protein HSR1-related; KEGG: amt:Amet_2225 GTP-binding protein, HSR1-related
YP_001513323.1	TIGRFAM: Sporulation protein YunB; KEGG: amt:Amet_2224 sporulation protein YunB
YP_001513324.1	TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: amt:Amet_2223 penicillin-binding protein, 1A family
YP_001513325.1	TIGRFAM: Sporulation stage V protein AE; PFAM: SpoVA protein; KEGG: cpr:CPR_2017 stage V sporulation protein AE
YP_001513326.1	PFAM: Stage V sporulation AD family protein; KEGG: tte:TTE1320 spore formation protein spoVAD
YP_001513327.1	TIGRFAM: Sporulation stage V protein AC; PFAM: SpoVA protein; KEGG: cdf:CD0773 stage V sporulation protein AC
YP_001513328.1	KEGG: oih:OB1835 stage V sporulation protein AB
YP_001513329.1	KEGG: bat:BAS3981 stage V sporulation protein AA
YP_001513330.1	TIGRFAM: RNA polymerase sigma-F type; RNA polymerase sigma-70; RNA polymerase sigma-B/F/G type; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: cdf:CD0772 RNA polymerase sigma-F factor
YP_001513331.1	binds to sigma F preventing its association with RNA polymerase during sporulation
YP_001513332.1	TIGRFAM: anti-anti-sigma factor; Anti-sigma F factor antagonist; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: cpr:CPR_2022 anti-sigma F factor antagonist
YP_001513333.1	PFAM: methyladenine glycosylase; KEGG: tte:TTE0091 3-Methyladenine DNA glycosylase
YP_001513334.1	PFAM: isochorismatase hydrolase; KEGG: aau:AAur_3924 putative isochorismatase family protein
YP_001513336.1	PFAM: aminoglycoside phosphotransferase; KEGG: mba:Mbar_A1987 hypothetical protein
YP_001513337.1	PFAM: GCN5-related N-acetyltransferase; KEGG: cac:CAC2509 predicted acetyltransferase
YP_001513339.1	KEGG: eca:ECA1285 hypothetical protein
YP_001513340.1	PFAM: protein of unknown function DUF1446; KEGG: rpc:RPC_0825 protein of unknown function DUF1446
YP_001513341.1	TIGRFAM: citrate/H+ symporter, CitMHS family; PFAM: Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rpc:RPC_0826 citrate transporter
YP_001513342.1	KEGG: bcl:ABC0453 transcriptional regulator; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; SMART: PAS domain containing protein; AAA ATPase
YP_001513343.1	KEGG: cth:Cthe_2121 hypothetical protein
YP_001513344.1	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: cpr:CPR_2514 MATE efflux family protein
YP_001513345.1	PFAM: GCN5-related N-acetyltransferase; KEGG: dsy:DSY3675 hypothetical protein
YP_001513346.1	PFAM: membrane protein of unknown function; KEGG: sat:SYN_01406 hypothetical membrane protein
YP_001513347.1	TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; KEGG: chy:CHY_0805 molybdenum cofactor synthesis domain protein
YP_001513348.1	TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; KEGG: dsy:DSY3965 hypothetical protein
YP_001513349.1	Required for the synthesis of the thiazole moiety
YP_001513350.1	PFAM: aminotransferase class V; KEGG: cdf:CD0753 putative cysteine desulfurase
YP_001513351.1	PFAM: protein of unknown function DUF1121; KEGG: gur:Gura_4126 protein of unknown function DUF1121
YP_001513352.1	PFAM: Asparaginase/glutaminase; KEGG: cbo:CBO2516 L-asparaginase
YP_001513353.1	PFAM: UvrD/REP helicase; KEGG: cdf:CD0749 putative ATP-dependent DNA helicase
YP_001513354.1	PFAM: S-layer domain protein; KEGG: cth:Cthe_2809 glycoside hydrolase, family 16
YP_001513355.1	KEGG: ctc:CTC00967 hypothetical protein
YP_001513356.1	KEGG: slo:Shew_3054 hypothetical protein
YP_001513357.1	PFAM: helix-turn-helix domain protein; KEGG: gka:GK0493 transcriptional regulator
YP_001513362.1	KEGG: btl:BALH_0258 possible Rep protein
YP_001513363.1	PFAM: integrase family protein; KEGG: chy:CHY_1792 tyrosine recombinase XerC
YP_001513364.1	PFAM: phosphate acetyl/butaryl transferase; KEGG: cdf:CD0715 putative phosphate butyryltransferase
YP_001513365.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: cdf:CD0714 hypothetical protein
YP_001513367.1	PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cdf:CD0713 putative adenosylcobamide-dependent radical SAM superfamily protein
YP_001513368.1	KEGG: cpr:CPR_2292 hypothetical protein
YP_001513370.1	KEGG: cdf:CD0712 hypothetical protein
YP_001513371.1	PFAM: protein of unknown function DUF523; KEGG: cno:NT01CX_1774 hypothetical protein
YP_001513372.1	KEGG: cdf:CD0709 putative DNA mismatch repair protein; TIGRFAM: MutS2 family protein; PFAM: DNA mismatch repair protein MutS domain protein; Smr protein/MutS2; SMART: MutS III domain protein
YP_001513373.1	TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: cth:Cthe_1007 GTP-binding protein TypA
YP_001513374.1	PFAM: FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: drm:Dred_1436 FAD dependent oxidoreductase
YP_001513375.1	PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: drm:Dred_1437 HI0933 family protein
YP_001513376.1	PFAM: Rubrerythrin; Rubredoxin-type Fe(Cys)4 protein; KEGG: cth:Cthe_1771 rubrerythrin
YP_001513377.1	PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: mth:MTH1484 hypothetical protein
YP_001513378.1	PFAM: nucleoside recognition domain protein; KEGG: gka:GK3080 hypothetical protein
YP_001513379.1	PFAM: nucleoside recognition domain protein; KEGG: bcl:ABC3053 hypothetical protein
YP_001513380.1	PFAM: superoxide dismutase copper/zinc binding; KEGG: ctc:CTC00590 superoxide dismutase (Cu-Zn)
YP_001513381.1	PFAM: Resolvase domain; Recombinase; KEGG: cac:CAC1228 site-specific DNA recombinase
YP_001513385.1	KEGG: msi:Msm_0058 DNA helicase II
YP_001513388.1	PFAM: helix-turn-helix domain protein
YP_001513389.1	PFAM: helix-turn-helix domain protein; KEGG: gka:GK0493 transcriptional regulator
YP_001513391.1	KEGG: ngo:NGO1795 DNA (cytosine-5-)-methyltransferase; TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase
YP_001513392.1	KEGG: deb:DehaBAV1_0080 type II site-specific deoxyribonuclease
YP_001513393.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: pfl:PFL_3016 helicase
YP_001513395.1	KEGG: cef:CE1218 hypothetical protein
YP_001513397.1	KEGG: stt:t0349 hypothetical protein
YP_001513399.1	KEGG: bfr:BF3456 hypothetical protein
YP_001513403.1	PFAM: protein of unknown function DUF450; KEGG: ajs:Ajs_1568 protein of unknown function DUF450
YP_001513404.1	KEGG: cch:Cag_0308 hypothetical protein
YP_001513405.1	KEGG: cpf:CPF_2595 hypothetical protein
YP_001513406.1	KEGG: aav:Aave_0087 hypothetical protein
YP_001513407.1	KEGG: lic:LIC12888 hypothetical protein
YP_001513410.1	KEGG: cac:CAC2045 secreted protein containing domain of murein hydrolase (MltA homolog)
YP_001513414.1	KEGG: ddi:DDBDRAFT_0206221 hypothetical protein
YP_001513415.1	KEGG: dsy:DSY0038 hypothetical protein
YP_001513417.1	TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: csc:Csac_1336 single-strand binding protein
YP_001513418.1	PFAM: peptidase A24A prepilin type IV; KEGG: bha:BH3035 leader peptidase (prepilin peptidase) / N-methyltransferase
YP_001513419.1	KEGG: csc:Csac_2638 PKD domain containing protein
YP_001513421.1	PFAM: S-layer domain protein; KEGG: swo:Swol_1963 hypothetical protein
YP_001513422.1	KEGG: cdf:CD0908 phage protein
YP_001513423.1	KEGG: hypothetical protein
YP_001513424.1	KEGG: tva:TVAG_192230 viral A-type inclusion protein, putative
YP_001513425.1	KEGG: cch:Cag_0519 hypothetical protein
YP_001513426.1	KEGG: bce:BC0397 hypothetical cytosolic protein
YP_001513427.1	KEGG: tpe:Tpen_1392 hypothetical protein
YP_001513429.1	PFAM: Integrase catalytic region; KEGG: dsy:DSY3295 hypothetical protein
YP_001513430.1	PFAM: transposase IS3/IS911 family protein; KEGG: dsy:DSY4613 hypothetical protein
YP_001513431.1	KEGG: cbo:CBO0943 membrane protein
YP_001513432.1	PFAM: Domain of unknown function DUF1791; KEGG: csc:Csac_1646 hypothetical protein
YP_001513433.1	TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; KEGG: rci:RCIX2529 C-5 cytosine-specific DNA methyltransferase
YP_001513435.1	PFAM: ATP-binding region ATPase domain protein; KEGG: azo:azo0358 putative two-component sensor kinase
YP_001513441.1	KEGG: tte:TTE2067 hypothetical protein
YP_001513442.1	KEGG: cac:CAC1979 predicted membrane protein
YP_001513443.1	PFAM: type II secretion system protein E; KEGG: cac:CAC1980 predicted ATPase involved in pili biogenesis
YP_001513444.1	KEGG: cac:CAC1981 hypothetical protein
YP_001513446.1	KEGG: gtn:GTNG_3455 TraL
YP_001513448.1	PFAM: TRAG family protein; KEGG: csc:Csac_1400 TraG family protein
YP_001513450.1	PFAM: Relaxase/mobilization nuclease family protein; KEGG: cbo:CBOP12 possible mobilisation protein
YP_001513451.1	KEGG: cbo:CBOP11 possible mobilisation protein
YP_001513453.1	KEGG: aau:AAur_3080 hypothetical protein
YP_001513455.1	PFAM: zinc finger CHC2-family protein; KEGG: dsy:DSY4633 hypothetical protein
YP_001513457.1	PFAM: filamentation induced by cAMP protein Fic; KEGG: dsy:DSY0147 hypothetical protein
YP_001513459.1	PFAM: ParB domain protein nuclease; KEGG: ctc:CTC01936 chromosome partitioning parB family protein
YP_001513460.1	PFAM: Cobyrinic acid ac-diamide synthase; KEGG: ctc:CTC01937 sporulation initiation inhibitor soj family protein
YP_001513464.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_B0448 GCN5-related N-acetyltransferase
YP_001513465.1	PFAM: GCN5-related N-acetyltransferase
YP_001513467.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pae:PA2455 hypothetical protein
YP_001513469.1	PFAM: GCN5-related N-acetyltransferase; KEGG: cpr:CPR_0858 acetyltransferase, GNAT family
YP_001513470.1	TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein; KEGG: cph:Cpha266_1912 magnesium and cobalt transport protein CorA
YP_001513471.1	PFAM: alpha/beta hydrolase fold; KEGG: ctc:CTC01150 non-heme chloroperoxidase
YP_001513472.1	PFAM: protein of unknown function UPF0027; KEGG: cth:Cthe_0250 protein of unknown function UPF0027
YP_001513473.1	primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination
YP_001513474.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: tde:TDE2401 hypothetical protein
YP_001513475.1	PFAM: peptidase M16 domain protein; Peptidase M16C associated domain protein; KEGG: cno:NT01CX_1662 Zn-dependent peptidase, insulinase family
YP_001513476.1	KEGG: ctc:CTC00796 hypothetical protein
YP_001513477.1	TIGRFAM: molybdenum cofactor synthesis domain; competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; CinA domain protein; KEGG: cpr:CPR_0128 CinA family protein
YP_001513478.1	PFAM: Peptidoglycan-binding LysM; KEGG: cel:F07G11.9 F07G11.9
YP_001513479.1	PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: tde:TDE2781 ABC transporter, ATP-binding/permease protein
YP_001513480.1	PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: tde:TDE2782 ABC transporter, ATP-binding/permease protein
YP_001513481.1	Contains selenocysteine; TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; KEGG: hma:rrnAC1491 peptide methionine sulfoxide reductase MsrA1
YP_001513482.1	PFAM: Rhomboid family protein; KEGG: cth:Cthe_0259 rhomboid-like protein
YP_001513483.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; extracellular solute-binding protein family 3; KEGG: cth:Cthe_0408 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
YP_001513484.1	PFAM: beta-lactamase domain protein; flavodoxin/nitric oxide synthase; KEGG: mta:Moth_1287 beta-lactamase-like
YP_001513485.1	TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: cno:NT01CX_0192 uracil-xanthine permease
YP_001513486.1	KEGG: cth:Cthe_3121 hypothetical protein
YP_001513487.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: cbo:CBO1192 pyruvate-flavodoxin oxidoreductase
YP_001513488.1	KEGG: ctc:CTC02358 threonine synthase; TIGRFAM: threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit
YP_001513489.1	KEGG: cbo:CBO1639 homoserine kinase; TIGRFAM: homoserine kinase; PFAM: GHMP kinase; GHMP kinase domain protein
YP_001513490.1	PFAM: amino acid-binding ACT domain protein; KEGG: cac:CAC1234 chorismate mutase PheB of B.subtilis ortholog
YP_001513491.1	KEGG: cbo:CBO0038 hypothetical protein
YP_001513492.1	KEGG: cac:CAC1317 potassium channel subunit
YP_001513493.1	catalyzes the hydrolysis of pyrophosphate to phosphate
YP_001513494.1	PFAM: response regulator receiver; CheW domain protein; KEGG: bha:BH2262 modulation of CheA activity in response to attractants (chemotaxis protein)
YP_001513495.1	KEGG: cdf:CD3666 hypothetical protein
YP_001513496.1	PFAM: SirA family protein; KEGG: pth:PTH_0551 predicted redox protein
YP_001513497.1	KEGG: mta:Moth_1442 hypothetical protein
YP_001513498.1	PFAM: S-layer domain protein; KEGG: tte:TTE0861 hypothetical protein
YP_001513499.1	KEGG: pth:PTH_1534 hypothetical protein
YP_001513500.1	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: ctc:CTC00603 Na+ driven multidrug efflux pump (MviN domain)
YP_001513501.1	PFAM: protein of unknown function DUF520; KEGG: drm:Dred_1927 protein of unknown function DUF520
YP_001513502.1	KEGG: ctc:CTC02044 Ser/Thr and Tyr protein phosphatase (dual specificity)#
YP_001513503.1	PFAM: peptidase U32; KEGG: cdf:CD0703 protease
YP_001513504.1	PFAM: protein of unknown function DUF710; KEGG: cac:CAC2355 hypothetical protein
YP_001513505.1	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily
YP_001513506.1	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily
YP_001513507.1	PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: cth:Cthe_1222 RNA methyltransferase, TrmH family, group 3
YP_001513508.1	PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: cpf:CPF_2142 putative potassium uptake protein
YP_001513509.1	KEGG: tte:TTE0196 trk-type K+ transport systems, membrane components; TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter
YP_001513510.1	binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit
YP_001513511.1	PFAM: ribosomal protein L35; KEGG: swo:Swol_1091 50S ribosomal protein L35
YP_001513512.1	TIGRFAM: translation initiation factor IF-3; PFAM: initiation factor 3; KEGG: cth:Cthe_1225 translation initiation factor IF-3
YP_001513513.1	KEGG: cdf:CD0684 putative ATP-dependent peptidase; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; SMART: AAA ATPase
YP_001513514.1	catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr)
YP_001513515.1	KEGG: cdf:CD0573 putative membrane protin
YP_001513516.1	PFAM: Sporulation protein YtxC; KEGG: cth:Cthe_2071 hypothetical protein
YP_001513517.1	PFAM: FeoA family protein; KEGG: mta:Moth_1407 FeoA
YP_001513518.1	PFAM: GTP-binding protein HSR1-related; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; nucleoside recognition domain protein; KEGG: ctc:CTC00451 ferrous iron transport protein B
YP_001513519.1	PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: pth:PTH_2468 retron-type reverse transcriptase
YP_001513520.1	KEGG: cno:NT01CX_1675 hypothetical protein
YP_001513521.1	PFAM: Integrase catalytic region; KEGG: dsy:DSY3295 hypothetical protein
YP_001513522.1	PFAM: transposase IS3/IS911 family protein; KEGG: dsy:DSY4613 hypothetical protein
YP_001513523.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pat:Patl_2636 GCN5-related N-acetyltransferase
YP_001513524.1	PFAM: GCN5-related N-acetyltransferase; KEGG: fjo:Fjoh_1285 GCN5-related N-acetyltransferase
YP_001513525.1	KEGG: cno:NT01CX_1181 lipoprotein, putative
YP_001513526.1	KEGG: pgi:PG0565 hypothetical protein
YP_001513528.1	KEGG: cpr:CPR_0799 hypothetical protein
YP_001513529.1	KEGG: cno:NT01CX_1830 hypothetical protein
YP_001513530.1	PFAM: Endoribonuclease L-PSP; KEGG: cmi:CMM_0658 putative endoribonuclease L-PSP
YP_001513531.1	KEGG: spj:MGAS2096_Spy1119 hypothetical protein
YP_001513533.1	PFAM: transposase IS3/IS911 family protein; KEGG: dsy:DSY4613 hypothetical protein
YP_001513534.1	PFAM: Integrase catalytic region; KEGG: dsy:DSY3295 hypothetical protein
YP_001513536.1	becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers
YP_001513537.1	PFAM: YCII-related; KEGG: oih:OB2607 hypothetical protein
YP_001513538.1	PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: efa:EF1367 cold-shock domain family protein
YP_001513539.1	PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: cdf:CD3220 putative methyltransferase
YP_001513540.1	KEGG: cpr:CPR_1870 small, acid-soluble spore protein, alpha/beta family
YP_001513541.1	catalyzes the formation of glutamate from glutamine
YP_001513542.1	PFAM: phosphoribulokinase/uridine kinase; SMART: AAA ATPase; KEGG: cth:Cthe_0332 phosphoribulokinase/uridine kinase
YP_001513543.1	PFAM: CBS domain containing protein; KEGG: bha:BH2605 hypothetical protein
YP_001513544.1	TIGRFAM: signal peptidase I; PFAM: peptidase S24 S26A and S26B; KEGG: cdf:CD0554 signal peptidase I
YP_001513545.1	KEGG: sth:STH879 conserved domain protein, proline-rich
YP_001513546.1	KEGG: cno:NT01CX_1222 hypothetical protein
YP_001513547.1	PFAM: Abortive infection protein; KEGG: tte:TTE2577 predicted metal-dependent membrane protease
YP_001513548.1	KEGG: cdf:CD3231 hypoxanthine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase
YP_001513549.1	binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA
YP_001513550.1	TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: aae:aq_1747 UDP-MurNac-tripeptide synthetase
YP_001513551.1	PFAM: polysaccharide deacetylase; KEGG: csc:Csac_2009 polysaccharide deacetylase
YP_001513552.1	PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: drm:Dred_3207 substrate-binding region of ABC-type glycine betaine transport system
YP_001513553.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lmf:LMOf2365_1036 glycine betaine/L-proline ABC transporter, permease protein
YP_001513554.1	KEGG: drm:Dred_3209 glycine betaine/L-proline ABC transporter, ATPase subunit; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: CBS domain containing protein; ABC transporter related; SMART: AAA ATPase
YP_001513555.1	KEGG: bcl:ABC1070 transcriptional regulator
YP_001513556.1	catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate
YP_001513557.1	PFAM: Na+/Picotransporter; KEGG: cpf:CPF_2677 Na/Pi-cotransporter family protein/PhoU family protein
YP_001513558.1	PFAM: small acid-soluble spore protein alpha/beta type; KEGG: cdf:CD3249 small acid-soluble spore protein B
YP_001513559.1	KEGG: cdf:CD3250 hypothetical protein
YP_001513560.1	TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: cdf:CD3251 hypothetical protein
YP_001513561.1	TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: cdf:CD3253 putative folylpolyglutamate synthase
YP_001513562.1	KEGG: rci:RCIX2529 C-5 cytosine-specific DNA methyltransferase; TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase
YP_001513563.1	PFAM: NERD domain protein; KEGG: pat:Patl_4099 NERD domain-containing family protein
YP_001513564.1	KEGG: pat:Patl_4100 hypothetical protein
YP_001513565.1	PFAM: helicase domain protein; KEGG: cdf:CD3149 putative DNA helicase
YP_001513566.1	KEGG: pat:Patl_4102 superfamily I DNA and RNA helicases-like
YP_001513567.1	PFAM: Heat shock protein 70; KEGG: fnu:FN0116 chaperone protein dnaK
YP_001513568.1	KEGG: tva:TVAG_012450 viral A-type inclusion protein, putative
YP_001513569.1	KEGG: pfa:PF11_0392 hypothetical protein
YP_001513570.1	TIGRFAM: valyl-tRNA synthetase; KEGG: cdf:CD3256 valyl-tRNA synthetase
YP_001513571.1	TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: ctc:CTC00117 phosphatidylglycerophosphate synthase
YP_001513573.1	PFAM: NMT1/THI5 like domain protein; KEGG: ctc:CTC00407 ABC transporter substrate-binding protein
YP_001513574.1	KEGG: bcz:BCZK2510 hypothetical protein
YP_001513576.1	PFAM: NUDIX hydrolase; KEGG: btl:BALH_0560 MutT/NUDIX family protein
YP_001513577.1	PFAM: NUDIX hydrolase; KEGG: cdf:CD0705 putative DNA repair protein
YP_001513578.1	PFAM: GCN5-related N-acetyltransferase; KEGG: acb:A1S_2199 GCN5-related N-acetyltransferase
YP_001513579.1	PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: cbo:CBO0657 Crp-family transcriptional regulator
YP_001513580.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: rci:RCIX1787 cation-transporting P-type ATPase
YP_001513581.1	PFAM: Heavy metal transport/detoxification protein; KEGG: lsl:LSL_1784 hypothetical protein
YP_001513582.1	PFAM: protein of unknown function DUF1063; KEGG: cdf:CD3232 hypothetical protein
YP_001513583.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: PAS domain containing protein; AAA ATPase; KEGG: cdf:CD3233 putative sigma-54 interacting protein
YP_001513584.1	PFAM: YibE/F family protein; KEGG: drm:Dred_2717 YibE/F family protein
YP_001513585.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; calcium-translocating P-type ATPase, PMCA-type; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: ddi:DDB_0233096 P-type ATPase
YP_001513586.1	TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: bcl:ABC0856 epimerase
YP_001513587.1	PFAM: Pirin domain protein; KEGG: cbo:CBO0860 pirin-family protein
YP_001513588.1	TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; KEGG: sth:STH1761 peptide methionine sulfoxide reductase
YP_001513589.1	PFAM: GCN5-related N-acetyltransferase
YP_001513590.1	PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: cac:CAC2475 possible 5-Nitroimidazole antibiotics resistance protein, NimA-family
YP_001513591.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bce:BC2094 acetyltransferase
YP_001513592.1	KEGG: tma:TM1012 hypothetical protein
YP_001513593.1	KEGG: dsy:DSY0624 hypothetical protein
YP_001513594.1	PFAM: small acid-soluble spore protein alpha/beta type
YP_001513595.1	TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; PFAM: Radical SAM domain protein; KEGG: mta:Moth_1448 ribonucleoside-triphosphate reductase, anaerobic-like
YP_001513596.1	Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates
YP_001513597.1	PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: ctc:CTC00197 stage V sporulation protein B
YP_001513598.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: btl:BALH_1927 ABC transporter, ATP-binding protein
YP_001513599.1	KEGG: cac:CAC0953 hypothetical protein
YP_001513600.1	KEGG: cno:NT01CX_0654 glutamate racemase; TIGRFAM: glutamate racemase; PFAM: Asp/Glu racemase
YP_001513602.1	KEGG: cth:Cthe_2090 hypothetical protein
YP_001513603.1	TIGRFAM: Spore germination YpeB; PFAM: Propeptide PepSY amd peptidase M4; KEGG: tte:TTE2550 putative spore germination protein
YP_001513604.1	TIGRFAM: Spore cortex-lytic enzyme SleB; PFAM: Peptidoglycan-binding domain 1 protein; cell wall hydrolase SleB; KEGG: sth:STH2958 spore cortex-lytic enzyme precursor
YP_001513605.1	TIGRFAM: magnesium transporter; PFAM: CBS domain containing protein; MgtE integral membrane region; MgtE intracellular region; KEGG: cbo:CBO1124 Mg2+ transporter
YP_001513606.1	TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: cbo:CBO0615 probable cell cycle protein
YP_001513607.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; Cache type 2 domain protein; KEGG: cbo:CBO2811 methyl-accepting chemotaxis protein
YP_001513608.1	PFAM: small acid-soluble spore protein alpha/beta type; KEGG: cdf:CD3249 small acid-soluble spore protein B
YP_001513609.1	PFAM: major facilitator superfamily MFS_1; KEGG: cno:NT01CX_0803 major facilitator superfamily protein
YP_001513611.1	KEGG: cbo:CBO1658 hypothetical protein
YP_001513613.1	PFAM: protein of unknown function DUF214; KEGG: csc:Csac_0506 protein of unknown function DUF214
YP_001513614.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: csc:Csac_0507 ABC transporter related
YP_001513615.1	PFAM: ATP-binding region ATPase domain protein; KEGG: csc:Csac_0508 integral membrane sensor signal transduction histidine kinase
YP_001513616.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: csc:Csac_0509 two component transcriptional regulator, winged helix family
YP_001513617.1	KEGG: amt:Amet_1360 metal-dependent protein-like protein
YP_001513618.1	PFAM: Hemerythrin HHE cation binding domain protein; KEGG: amt:Amet_1359 hemerythrin HHE cation binding domain protein
YP_001513619.1	PFAM: peptidase U62 modulator of DNA gyrase; KEGG: cdf:CD2866 putative regulatory protease
YP_001513620.1	PFAM: peptidase U62 modulator of DNA gyrase; KEGG: cpe:CPE0339 TldD protein
YP_001513621.1	KEGG: amt:Amet_1351 hypothetical protein
YP_001513622.1	PFAM: Ferritin Dps family protein; KEGG: amt:Amet_1346 ferritin, Dps family protein
YP_001513623.1	PFAM: sodium/hydrogen exchanger; KEGG: cbo:CBO2772 Na(+)/H(+) antiporter
YP_001513624.1	KEGG: cth:Cthe_1401 hypothetical protein
YP_001513625.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tte:TTE0642 ABC-type nitrate/sulfonate/taurine/bicarbonate transport systems, ATPase components
YP_001513626.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tte:TTE0641 ABC-type nitrate/sulfonate/taurine/bicarbonate transport systems, permease components
YP_001513627.1	PFAM: GAF domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: sbl:Sbal_3086 metal dependent phosphohydrolase
YP_001513628.1	KEGG: cth:Cthe_0077 hypothetical protein
YP_001513629.1	KEGG: cpr:CPR_0432 general stress protein, putative
YP_001513630.1	PFAM: glutamine synthetase catalytic region; KEGG: cdf:CD1343 glutamine synthetase
YP_001513631.1	PFAM: histidine kinase HAMP region domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: rrs:RoseRS_0338 response regulator receiver modulated metal dependent phosphohydrolase
YP_001513632.1	PFAM: response regulator receiver; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: sat:SYN_00230 response regulator receiver domain and a sigma factor phosphatase domain
YP_001513633.1	PFAM: FMN-binding domain protein; KEGG: dsy:DSY4227 hypothetical protein
YP_001513634.1	PFAM: FMN-binding domain protein; KEGG: aor:AO090011000451 predicted protein Pfam: Collagen PROSITE: GLN_RICH GLU_RICH GLY_RICH LYS_RICH
YP_001513635.1	PFAM: FMN-binding domain protein; KEGG: efa:EF3256 pheromone cAD1 precursor lipoprotein
YP_001513636.1	PFAM: ApbE family lipoprotein; KEGG: cpf:CPF_2491 ApbE family protein
YP_001513637.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; KEGG: cdf:CD0309 putative phosphoserine phosphatase
YP_001513638.1	catalyze the formation of cyanophycin which may act to store excess nitrogen
YP_001513639.1	TIGRFAM: cyanophycinase; PFAM: peptidase S51 dipeptidase E; KEGG: swo:Swol_1351 cyanophycinase
YP_001513640.1	PFAM: polysaccharide deacetylase; KEGG: tte:TTE0866 predicted xylanase/chitin deacetylase
YP_001513641.1	TIGRFAM: Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter; PhoU family protein; KEGG: cdf:CD3286 putative sodium-dependent phosphate transporter
YP_001513642.1	TIGRFAM: acyl carrier protein; PFAM: phosphopantetheine-binding; KEGG: cdf:CD1062 acyl carrier protein
YP_001513643.1	KEGG: mmu:674885 hypothetical protein LOC674885
YP_001513644.1	PFAM: protein of unknown function DUF322; KEGG: cbo:CBO1887 hypothetical protein
YP_001513645.1	KEGG: mta:Moth_2174 molybdopterin-guanine dinucleotide biosynthesis protein A
YP_001513646.1	PFAM: RNA binding S1 domain protein; KEGG: cno:NT01CX_0180 S1 RNA binding domain
YP_001513648.1	PFAM: Domain of unknown function DUF1893; KEGG: bfr:BF4297 putative TonB-dependent outer membrane receptor
YP_001513649.1	PFAM: membrane-bound metal-dependent hydrolase; KEGG: cdf:CD1288 putative membrane-bound metal-dependent hydrolase
YP_001513650.1	TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: csc:Csac_1297 DegV family protein
YP_001513652.1	tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine
YP_001513653.1	PFAM: protein of unknown function DUF881; KEGG: tte:TTE0278 hypothetical protein
YP_001513654.1	PFAM: CBS domain containing protein; amino acid-binding ACT domain protein; KEGG: cpr:CPR_2131 CBS domain protein
YP_001513655.1	KEGG: cdf:CD2610 tryptophanyl-tRNA synthetase; TIGRFAM: tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib
YP_001513656.1	PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: bcz:BCZK3533 pyruvate ferredoxin oxidoreductase, alpha subunit
YP_001513657.1	catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin
YP_001513659.1	PFAM: formate-tetrahydrofolate ligase FTHFS; KEGG: dsy:DSY0205 hypothetical protein
YP_001513660.1	PFAM: chemotaxis sensory transducer; Heme NO binding domain protein; KEGG: tte:TTE0680 methyl-accepting chemotaxis protein
YP_001513661.1	PFAM: glutaredoxin; KEGG: cth:Cthe_0235 glutaredoxin-like protein, YruB-family; Contains selenocysteine
YP_001513663.1	KEGG: cno:NT01CX_0906 hypothetical protein
YP_001513664.1	PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: tte:TTE2773 cAMP-binding domains - Catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
YP_001513666.1	PFAM: ABC-3 protein; KEGG: cth:Cthe_0549 ABC-3
YP_001513667.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: btl:BALH_3874 cation ABC transporter, ATP-binding protein
YP_001513668.1	PFAM: periplasmic solute binding protein; KEGG: dsy:DSY0103 hypothetical protein
YP_001513669.1	TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: chy:CHY_0863 sec-independent protein translocase protein TatC
YP_001513670.1	PFAM: molybdopterin binding domain; KEGG: chy:CHY_0621 molybdopterin-binding domain protein
YP_001513671.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sth:STH228 putative polyferredoxin
YP_001513672.1	PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; KEGG: ecj:JW5272 predicted oxidoreductase
YP_001513673.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sbo:SBO_1458 putative oxidoreductase, Fe-S subunit
YP_001513674.1	PFAM: protein of unknown function DUF182; KEGG: ctc:CTC01880 alcohol dehydrogenase [cytochrome c-553], gamma chain-like protein
YP_001513675.1	PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; KEGG: ecj:JW5272 predicted oxidoreductase
YP_001513676.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sbo:SBO_1458 putative oxidoreductase, Fe-S subunit
YP_001513677.1	KEGG: ecs:ECs2379 hypothetical protein
YP_001513678.1	TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes
YP_001513679.1	TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; HI0933 family protein; KEGG: cbo:CBO0700 dihydrolipoyl dehydrogenase (E3 component of pyruvate complex)
YP_001513680.1	TIGRFAM: putative CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: cdf:CD1750 putative (R)-2-hydroxyglutaryl-CoA dehydratase alpha-subunit
YP_001513681.1	PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: drm:Dred_1278 2-hydroxyglutaryl-CoA dehydratase, D-component
YP_001513682.1	TIGRFAM: putative CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: cth:Cthe_0354 putative CoA-substrate-specific enzyme activase
YP_001513683.1	KEGG: cth:Cthe_0353 hypothetical protein
YP_001513684.1	KEGG: cth:Cthe_0352 hypothetical protein
YP_001513685.1	PFAM: phospholipase D/Transphosphatidylase; KEGG: bcz:BCZK1088 cardiolipin synthetase
YP_001513686.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: gme:Gmet_1298 diguanylate cyclase (GGDEF domain)
YP_001513687.1	KEGG: cac:CAC3567 topoisomerase B; TIGRFAM: DNA topoisomerase III; PFAM: TOPRIM domain protein; DNA topoisomerase type IA central domain protein; SMART: DNA topoisomerase I ATP-binding; DNA topoisomerase I DNA-binding; Toprim sub domain protein
YP_001513688.1	PFAM: TPR repeat-containing protein; ADP-ribosylation/Crystallin J1; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rno:362600 ADP-ribosylhydrolase like 2 (predicted)
YP_001513689.1	TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: cdf:CD3253 putative folylpolyglutamate synthase
YP_001513690.1	KEGG: bcl:ABC1239 oligopeptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase
YP_001513691.1	KEGG: dsy:DSY0505 hypothetical protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase
YP_001513692.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bld:BLi01233 oligopeptide ABC transporter (permease) (initiation of sporulation, competence development); RBL00613
YP_001513693.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sth:STH1955 ABC transporter permease protein
YP_001513694.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: cno:NT01CX_1199 cadmium-translocating P-type ATPase
YP_001513695.1	PFAM: regulatory protein ArsR; KEGG: cth:Cthe_0245 transcriptional regulator, ArsR family
YP_001513697.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: tte:TTE2473 sensory transduction histidine kinase
YP_001513698.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: tte:TTE2474 response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain
YP_001513699.1	KEGG: cth:Cthe_0057 hypothetical protein
YP_001513700.1	PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: pvi:Cvib_1621 rubredoxin-type Fe(Cys)4 protein
YP_001513701.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: tte:TTE0639 permeases of the drug/metabolite transporter (DMT) superfamily
YP_001513702.1	binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential
YP_001513703.1	KEGG: cth:Cthe_0082 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_001513704.1	KEGG: cth:Cthe_2742 endopeptidase La; TIGRFAM: Sporulation protease LonB; PFAM: magnesium chelatase ChlI subunit; AAA ATPase central domain protein; peptidase S16 lon domain protein; SMART: AAA ATPase
YP_001513705.1	binds and unfolds substrates as part of the ClpXP protease
YP_001513706.1	hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates
YP_001513707.1	Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer
YP_001513708.1	PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: cdf:CD1355 putative cold shock protein
YP_001513709.1	PFAM: protein of unknown function DUF1540; KEGG: chy:CHY_1044 hypothetical protein
YP_001513710.1	PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: cbo:CBO0657 Crp-family transcriptional regulator
YP_001513711.1	PFAM: beta-lactamase domain protein; flavodoxin/nitric oxide synthase; KEGG: cbo:CBO0658 anaerobic nitric oxide reductase flavorubredoxin
YP_001513712.1	KEGG: cac:CAC0275 hypothetical protein
YP_001513713.1	catalyzes the reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP
YP_001513715.1	TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: ctc:CTC00665 RNA polymerase sigma factor
YP_001513716.1	KEGG: cac:CAC0275 hypothetical protein
YP_001513717.1	PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: cbo:CBO1775 prolyl-tRNA binding protein
YP_001513718.1	PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; KEGG: ctc:CTC02355 homoserine dehydrogenase
YP_001513719.1	catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis
YP_001513720.1	PFAM: protein of unknown function DUF45; KEGG: bcz:BCZK0309 conserved hypothetical protein; possible zinc metalloprotease
YP_001513721.1	involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate
YP_001513722.1	catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway, using a flavin nucleotide as an essential cofactor; subclass 1B is a heterotetramer consisting of two PyrDB subunits, similar to the PyrDA subunits and two PyrK subunits
YP_001513723.1	PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: tte:TTE1531 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases
YP_001513724.1	TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; KEGG: cth:Cthe_0951 orotidine 5'-phosphate decarboxylase
YP_001513725.1	KEGG: cth:Cthe_0952 dihydroorotase, multifunctional complex type; TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase
YP_001513726.1	PFAM: protein of unknown function DUF218; KEGG: tte:TTE2177 hypothetical protein
YP_001513727.1	PFAM: protein of unknown function DUF421; KEGG: mta:Moth_0220 protein of unknown function DUF421
YP_001513728.1	IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 2 subfamily; some organisms carry two different copies of this enzyme; in some organisms, the type 2 subfamily is associated with resistance to the antibiotic pseudomonic acid (mupirocin)
YP_001513729.1	TIGRFAM: putative CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: cbo:CBO3170 activator of 2-hydroxyacyl-CoA dehydratase
YP_001513730.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: dsy:DSY0555 hypothetical protein
YP_001513731.1	PFAM: protein of unknown function DUF438; Hemerythrin HHE cation binding domain protein; KEGG: cth:Cthe_1509 protein of unknown function DUF438
YP_001513732.1	PFAM: Domain of unknown function DUF1858; KEGG: drm:Dred_1604 hypothetical protein
YP_001513733.1	PFAM: nucleoside recognition domain protein; KEGG: mta:Moth_1355 nucleoside recognition
YP_001513734.1	PFAM: nucleoside recognition domain protein; KEGG: ade:Adeh_4076 nucleoside recognition
YP_001513735.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: dsy:DSY3380 hypothetical protein
YP_001513736.1	PFAM: cysteine-rich small domain; KEGG: cdf:CD0787 putative metal-binding protein
YP_001513737.1	KEGG: cpr:CPR_1304 hypothetical protein
YP_001513738.1	KEGG: tte:TTE0378 hypothetical protein
YP_001513739.1	PFAM: Phosphoglycerate mutase; KEGG: cac:CAC1385 alpha-ribazole-5'-phosphate phosphatase, CobC
YP_001513740.1	TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS; KEGG: cth:Cthe_3152 cobalamin 5'-phosphate synthase
YP_001513741.1	PFAM: cobalbumin biosynthesis protein; KEGG: cdf:CD3438 bifunctional adenosylcobalamin biosynthesis protein
YP_001513742.1	TIGRFAM: putative L-threonine-O-3-phosphate decarboxylase; PFAM: aminotransferase class I and II; KEGG: fnu:FN0973 histidinol-phosphate aminotransferase
YP_001513743.1	TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB; KEGG: cdf:CD3433 cobalamin biosynthesis protein
YP_001513744.1	PFAM: protein of unknown function UPF0261; KEGG: cbo:CBO1534 hypothetical protein
YP_001513745.1	KEGG: cbo:CBO1535 hypothetical protein
YP_001513746.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rci:RCIX666 ABC-type transport system, ATPase component
YP_001513747.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cbo:CBO1945 permease component of tungstate ABC transporter
YP_001513748.1	PFAM: Ethanolamine utilisation protein EutH; KEGG: cdf:CD1924 putative ethanolamine/propanediol transporter
YP_001513749.1	PFAM: cell wall hydrolase/autolysin; KEGG: cdf:CD0106 germination-specific N-acetylmuramoyl-L-alanine amidase
YP_001513750.1	TIGRFAM: flavodoxin; PFAM: flavodoxin/nitric oxide synthase; KEGG: cno:NT01CX_2337 flavodoxin
YP_001513751.1	KEGG: cdf:CD1485 hypothetical protein
YP_001513752.1	KEGG: tte:TTE0483 hypothetical protein
YP_001513753.1	KEGG: drm:Dred_1384 hypothetical protein
YP_001513754.1	KEGG: cno:NT01CX_2418 phosphoribosylformylglycinamidine synthase; TIGRFAM: phosphoribosylformylglycinamidine synthase; PFAM: AIR synthase related protein domain protein
YP_001513755.1	TIGRFAM: glucosamine-6-phosphate isomerase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: cbo:CBO2833 glucosamine-6-phosphate deaminase
YP_001513756.1	KEGG: mla:Mlab_0296 hypothetical protein
YP_001513757.1	PFAM: transcriptional regulator PadR family protein; KEGG: mla:Mlab_0295 hypothetical protein
YP_001513758.1	KEGG: ecs:ECs4272 hypothetical membrane protein
YP_001513760.1	KEGG: cbo:CBO2157 lipoprotein
YP_001513761.1	KEGG: swo:Swol_1055 transposase
YP_001513763.1	PFAM: Integrase catalytic region; KEGG: dsy:DSY3295 hypothetical protein
YP_001513764.1	PFAM: transposase IS3/IS911 family protein; KEGG: dsy:DSY4613 hypothetical protein
YP_001513765.1	KEGG: btk:BT9727_1599 hypothetical protein
YP_001513766.1	KEGG: cth:Cthe_2749 hypothetical protein
YP_001513767.1	PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: swo:Swol_2219 hypothetical protein
YP_001513769.1	KEGG: swo:Swol_1055 transposase
YP_001513774.1	PFAM: Accessory gene regulator B; KEGG: sao:SAOUHSC_02261 accessory gene regulator protein B
YP_001513775.1	PFAM: ATP-binding region ATPase domain protein; KEGG: swo:Swol_2401 signal transduction histidine kinase regulating citrate/malate metabolism
YP_001513776.1	PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: tte:TTE0561 response regulators of cell autolysis
YP_001513777.1	PFAM: Rubrerythrin; KEGG: csc:Csac_1137 rubrerythrin
YP_001513778.1	Contains selenocysteine; TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: ppd:Ppro_3520 formate dehydrogenase, alpha subunit
YP_001513779.1	PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dsy:DSY2616 hypothetical protein
YP_001513780.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: tte:TTE0893 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit
YP_001513781.1	PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: cth:Cthe_0338 NADH-quinone oxidoreductase, E subunit
YP_001513784.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
YP_001513785.1	PFAM: type IV pilus assembly PilZ; KEGG: cbo:CBO2642 hypothetical protein
YP_001513786.1	KEGG: cdf:CD3411 excinuclease ABC subunit A; TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; SMART: AAA ATPase
YP_001513787.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion
YP_001513788.1	KEGG: tte:TTE1974 periplasmic protease; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41
YP_001513789.1	PFAM: peptidase M23B; KEGG: tte:TTE1975 membrane proteins related to metalloendopeptidase
YP_001513790.1	PFAM: protein of unknown function DUF214; KEGG: tte:TTE1976 cell division protein
YP_001513791.1	KEGG: tte:TTE1977 predicted ATPase involved in cell division; TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: AAA ATPase
YP_001513792.1	PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: drm:Dred_2882 5-formyltetrahydrofolate cyclo-ligase
YP_001513793.1	KEGG: cth:Cthe_2182 Ig-like, group 2
YP_001513794.1	KEGG: cdf:CD3457 hypothetical protein
YP_001513795.1	PFAM: Transketolase central region; Transketolase domain protein; KEGG: cpr:CPR_0288 transketolase
YP_001513796.1	PFAM: Transketolase domain protein; KEGG: dsy:DSY4868 hypothetical protein
YP_001513797.1	PFAM: protein of unknown function DUF161; KEGG: tde:TDE2546 hypothetical protein
YP_001513798.1	KEGG: csc:Csac_1349 glycosyl transferase, WecB/TagA/CpsF family; TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF
YP_001513799.1	PFAM: polysaccharide pyruvyl transferase; KEGG: cth:Cthe_2702 polysaccharide pyruvyl transferase
YP_001513800.1	KEGG: tte:TTE2165 hypothetical protein
YP_001513801.1	KEGG: sth:STH137 hypothetical protein
YP_001513802.1	PFAM: PemK family protein; KEGG: tte:TTE2166 growth inhibitor
YP_001513803.1	PFAM: CopG domain protein DNA-binding domain protein; KEGG: tte:TTE2167 predicted transcriptional regulator containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain
YP_001513804.1	KEGG: cth:Cthe_2697 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein
YP_001513805.1	TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase; KEGG: cdf:CD3466 holo-[acyl-carrier protein] synthase
YP_001513806.1	KEGG: cth:Cthe_2695 hypothetical protein
YP_001513807.1	KEGG: cth:Cthe_1300 hypothetical protein
YP_001513808.1	KEGG: nph:NP2988A hypothetical protein
YP_001513809.1	KEGG: gfo:GFO_1947 conserved hypothetical protein, membrane
YP_001513810.1	TIGRFAM: DNA binding domain, excisionase family; PFAM: TOBE domain protein; KEGG: pab:PAB0103 putative sulfate transport system ATP-binding protein
YP_001513811.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cdf:CD0871 putative molybdenum ABC transporter, ATP-binding protein
YP_001513812.1	TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cdf:CD0870 putative molybdenum ABC transporter, permease protein
YP_001513813.1	TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: pth:PTH_0675 ABC-type molybdate transport system, periplasmic component
YP_001513814.1	PFAM: copper amine oxidase domain protein; KEGG: cac:CAC1508 hypothetical protein
YP_001513815.1	PFAM: Citrate transporter; Na+/H+ antiporter NhaC; KEGG: cno:NT01CX_0266 Na+/H+ antiporter family protein
YP_001513816.1	PFAM: amino acid permease-associated region; KEGG: cbo:CBO1377 amino acid permease
YP_001513817.1	PFAM: SMC domain protein; KEGG: tte:TTE0266 ATPase involved in DNA repair
YP_001513818.1	TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase; KEGG: cno:NT01CX_1250 DNA repair exonuclease, putative
YP_001513819.1	TIGRFAM: Recombination helicase AddA; PFAM: UvrD/REP helicase; KEGG: swo:Swol_1146 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains)
YP_001513820.1	TIGRFAM: A/G-specific adenine glycosylase; PFAM: NUDIX hydrolase; helix-hairpin-helix motif; HhH-GPD family protein; KEGG: sth:STH1727 A/G-specific adenine glycosylase
YP_001513822.1	KEGG: cbo:CBO1054 hypothetical protein
YP_001513823.1	PFAM: metallophosphoesterase; SMART: serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase; KEGG: tva:TVAG_405950 Ser/Thr protein phosphatase, putative
YP_001513824.1	KEGG: dsy:DSY2128 hypothetical protein
YP_001513827.1	PFAM: KWG Leptospira repeat protein; copper amine oxidase domain protein; KEGG: cbo:CBO1667 hypothetical protein
YP_001513828.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dsy:DSY2132 hypothetical protein
YP_001513829.1	TIGRFAM: ATP-dependent nuclease subunit AddB; KEGG: swo:Swol_1142 ATP-dependent nuclease subunit B
YP_001513830.1	PFAM: M penetrans paralogue 2 domain protein; KEGG: cdf:CD2076 hypothetical protein
YP_001513831.1	PFAM: Domain of unknown function DUF1846; KEGG: cbo:CBO0329 hypothetical protein
YP_001513832.1	PFAM: conserved hypothetical protein; KEGG: ctc:CTC01844 membrane spanning protein, similar to vegetatible incompatibility protein HET-E-1
YP_001513833.1	catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate
YP_001513834.1	PFAM: nucleoside recognition domain protein; KEGG: oih:OB1260 hypothetical protein
YP_001513835.1	PFAM: iron-containing alcohol dehydrogenase; 3-dehydroquinate synthase; KEGG: cno:NT01CX_1239 putative glycerol dehydrogenase
YP_001513836.1	PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; FMN-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ctc:CTC00811 fumarate reductase flavoprotein subunit precursor
YP_001513837.1	PFAM: regulatory protein MerR; KEGG: btl:BALH_2398 possible transcriptional regulator, MerR family
YP_001513838.1	PFAM: peptidase M50; KEGG: drm:Dred_1132 peptidase M50
YP_001513839.1	KEGG: dsy:DSY4531 hypothetical protein; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; SMART: AAA ATPase
YP_001513840.1	TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: ctc:CTC02449 spore germination protein B2/KB
YP_001513841.1	PFAM: GerA spore germination protein; KEGG: ctc:CTC02448 spore germination protein KA
YP_001513842.1	PFAM: spore germination B3 GerAC family protein; KEGG: ctc:CTC02447 spore germination protein B3/KC
YP_001513843.1	PFAM: peptidase M42 family protein; KEGG: cpf:CPF_1252 aminopeptidase, M42 family
YP_001513844.1	KEGG: swo:Swol_1797 hypothetical protein
YP_001513845.1	PFAM: regulatory protein TetR; KEGG: bha:BH3207 hypothetical protein
YP_001513846.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: tte:TTE2131 NADH:flavin oxidoreductase, Old Yellow enzyme family
YP_001513847.1	KEGG: cac:CAC0222 exodeoxyribonuclease (exoA); TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase
YP_001513848.1	PFAM: Protein of unknown function CGGC region; KEGG: ctc:CTC00418 hypothetical protein
YP_001513849.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: bld:BLi03444 hypothetical protein
YP_001513850.1	PFAM: helix-turn-helix- domain containing protein AraC type; transcription activator effector binding; KEGG: ctc:CTC01432 transcriptional regulatory protein
YP_001513851.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: dsy:DSY1603 hypothetical protein
YP_001513853.1	PFAM: nucleic acid binding OB-fold tRNA/helicase-type; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: gsu:GSU1122 HD domain protein
YP_001513854.1	KEGG: dsy:DSY3868 hypothetical protein
YP_001513855.1	PFAM: von Willebrand factor type A; ATPase associated with various cellular activities AAA_5; KEGG: dsy:DSY3869 hypothetical protein
YP_001513856.1	KEGG: dsy:DSY3870 hypothetical protein; PFAM: magnesium chelatase ChlI subunit; SMART: AAA ATPase
YP_001513857.1	PFAM: CobN/magnesium chelatase; KEGG: dsy:DSY3871 cobalamin biosynthesis protein
YP_001513858.1	PFAM: transport system permease protein; KEGG: dsy:DSY3873 hypothetical protein
YP_001513859.1	PFAM: periplasmic binding protein; KEGG: dsy:DSY3874 hypothetical protein
YP_001513860.1	PFAM: Rubrerythrin; Rubredoxin-type Fe(Cys)4 protein; KEGG: amt:Amet_4180 rubrerythrin
YP_001513861.1	catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine
YP_001513862.1	KEGG: amt:Amet_4199 hypothetical protein
YP_001513865.1	KEGG: bld:BLi00939 3-dehydroquinate dehydratase; RBL00797; TIGRFAM: 3-dehydroquinate dehydratase, type I; PFAM: dehydroquinase class I
YP_001513866.1	PFAM: 2-nitropropane dioxygenase NPD; KEGG: ctc:CTC00125 hypothetical protein
YP_001513867.1	PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; KEGG: ctc:CTC01037 L-allo-threonine aldolase
YP_001513868.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: drm:Dred_0037 DEAD/DEAH box helicase domain protein
YP_001513869.1	catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_001513870.1	PFAM: regulatory protein LysR; KEGG: sen:SACE_2761 hypothetical protein
YP_001513871.1	PFAM: aminotransferase class V; KEGG: bam:Bamb_6253 aminotransferase, class V
YP_001513872.1	PFAM: sodium:dicarboxylate symporter; KEGG: fnu:FN0604 proton/sodium-aspartate symport protein
YP_001513874.1	PFAM: polysaccharide deacetylase; KEGG: cbo:CBO2775 probable polysaccharide deacetylase
YP_001513876.1	KEGG: cbo:CBO2289 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase
YP_001513877.1	PFAM: helix-turn-helix domain protein; KEGG: cac:CAC2473 predicted transcriptional regulator
YP_001513878.1	PFAM: VanZ family protein; KEGG: cbo:CBO2787 membrane protein
YP_001513879.1	KEGG: btk:BT9727_0955 cell division protein, FtsW/RodA/SpoVE family
YP_001513880.1	PFAM: transcriptional regulator PadR family protein; KEGG: cth:Cthe_1895 transcriptional regulator, PadR-like family
YP_001513881.1	PFAM: major facilitator superfamily MFS_1; KEGG: bcz:BCZK2412 permease
YP_001513882.1	PFAM: regulatory protein MerR; KEGG: btl:BALH_2398 possible transcriptional regulator, MerR family
YP_001513883.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cbo:CBO1531 glyoxylase-family protein
YP_001513884.1	PFAM: DEAD_2 domain protein; SMART: DEXDc2; helicase c2; KEGG: cth:Cthe_0289 DEAD_2
YP_001513885.1	KEGG: mla:Mlab_0151 hypothetical protein
YP_001513886.1	PFAM: protein of unknown function DUF77; KEGG: mta:Moth_2497 protein of unknown function DUF77
YP_001513887.1	KEGG: cpf:CPF_1678 pyrrolidone-carboxylate peptidase; TIGRFAM: pyrrolidone-carboxylate peptidase; PFAM: peptidase C15 pyroglutamyl peptidase I
YP_001513888.1	KEGG: cdf:CD2678 butyrate--acetoacetate CoA-transferase subunit B; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase
YP_001513889.1	KEGG: cdf:CD2677 butyrate--acetoacetate CoA-transferase subunit A; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase
YP_001513890.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: ctc:CTC00707 transcriptional regulatory protein
YP_001513891.1	PFAM: cytochrome c552; KEGG: dsy:DSY2472 cytochrome c nitrite reductase catalytic subunit NrfA
YP_001513892.1	KEGG: swo:Swol_1520 ResB protein required for cytochrome c biosynthesis-like protein
YP_001513893.1	PFAM: cytochrome c assembly protein; KEGG: mta:Moth_2200 cytochrome c assembly protein
YP_001513894.1	KEGG: dsy:DSY2099 hypothetical protein
YP_001513895.1	TIGRFAM: metal dependent phophohydrolase; PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; KEGG: cbo:CBO2302 poly A polymerase family protein
YP_001513896.1	PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: cbo:CBO1509 hypothetical protein
YP_001513897.1	PFAM: protein of unknown function DUF405; protein of unknown function DUF418; KEGG: bca:BCE_1699 membrane protein, putative
YP_001513898.1	PFAM: histidine kinase HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: dsy:DSY4989 hypothetical protein
YP_001513899.1	PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: cth:Cthe_0611 RNA-metabolising metallo-beta-lactamase
YP_001513900.1	TIGRFAM: Sporulation integral membrane protein YtvI; PFAM: protein of unknown function UPF0118; KEGG: cdf:CD2273 hypothetical protein
YP_001513901.1	PFAM: glycoside hydrolase family 3 domain protein; KEGG: ctc:CTC02158 putative anhydromuramoyl-peptide exo-beta-N-acetylglucosaminidase
YP_001513902.1	KEGG: cth:Cthe_1836 hypothetical protein
YP_001513903.1	PFAM: purine or other phosphorylase family 1; KEGG: ssv:SSU98_0737 uridine phosphorylase
YP_001513904.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD dependent oxidoreductase; KEGG: tte:TTE1674 dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes
YP_001513905.1	PFAM: inner-membrane translocator; KEGG: drm:Dred_2766 inner-membrane translocator
YP_001513906.1	PFAM: inner-membrane translocator; KEGG: tma:TM0104 simple sugar transport system permease protein
YP_001513907.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tma:TM0103 simple sugar transport system ATP-binding protein
YP_001513908.1	PFAM: basic membrane lipoprotein; KEGG: tte:TTE0457 Surface lipoprotein
YP_001513909.1	PFAM: cyclic nucleotide-binding; KEGG: ssu:SSU05_0736 hypothetical protein
YP_001513910.1	catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
YP_001513911.1	PFAM: protein of unknown function UPF0061; KEGG: btk:BT9727_3274 hypothetical protein
YP_001513912.1	PFAM: histidine kinase HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: bha:BH3903 methyl-accepting chemotaxis protein
YP_001513913.1	PFAM: microcompartments protein; KEGG: cbo:CBO2106 ethanolamine utilization protein
YP_001513914.1	PFAM: Propanediol utilization protein; KEGG: ctc:CTC01440 hypothetical protein
YP_001513915.1	TIGRFAM: acetaldehyde dehydrogenase (acetylating); KEGG: cbo:CBO2108 aldehyde-alcohol dehydrogenase
YP_001513916.1	PFAM: microcompartments protein; KEGG: cbo:CBO2109 propanediol/ethanolamine utilization protein
YP_001513917.1	PFAM: protein of unknown function DUF861 cupin_3; Ethanolamine utilisation EutQ family protein; KEGG: cbo:CBO2110 ethanolamine utilization protein
YP_001513918.1	PFAM: microcompartments protein; KEGG: dsy:DSY4996 hypothetical protein
YP_001513919.1	PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: drm:Dred_3270 respiratory-chain NADH dehydrogenase domain, 51 kDa subunit
YP_001513920.1	PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; KEGG: cbo:CBO2111 ethanolamine utilization protein
YP_001513921.1	TIGRFAM: ethanolamine utilization protein EutJ family protein; KEGG: cbo:CBO2113 ethanolamine utilization protein
YP_001513922.1	KEGG: ctc:CTC01445 hypothetical protein
YP_001513923.1	KEGG: cbo:CBO2115 ethanolamine utilization protein
YP_001513924.1	PFAM: microcompartments protein; KEGG: cbo:CBO2116 ethanolamine utilization protein
YP_001513925.1	KEGG: cbo:CBO2117 pyruvate formate-lyase activating enzyme; TIGRFAM: glycyl-radical enzyme activating protein family; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Radical SAM domain protein
YP_001513926.1	PFAM: formate C-acetyltransferase glycine radical; pyruvate formate-lyase PFL; KEGG: cbo:CBO2118 pyruvate formate-lyase
YP_001513927.1	KEGG: cbo:CBO2119 aldehyde-alcohol dehydrogenase
YP_001513928.1	PFAM: microcompartments protein; KEGG: dde:Dde_3284 carbon dioxide concentrating mechanism protein (PduA related)-like
YP_001513929.1	PFAM: microcompartments protein; KEGG: cbo:CBO2121 propanediol utilization protein
YP_001513930.1	KEGG: cbo:CBO2123 hypothetical protein
YP_001513931.1	KEGG: drm:Dred_3285 hypothetical protein
YP_001513932.1	PFAM: Choline/ethanolamine kinase; aminoglycoside phosphotransferase; KEGG: drm:Dred_3288 choline/ethanolamine kinase
YP_001513933.1	PFAM: iron-containing alcohol dehydrogenase; KEGG: drm:Dred_3279 iron-containing alcohol dehydrogenase
YP_001513934.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase internal region; KEGG: drm:Dred_3263 histidine kinase internal region
YP_001513935.1	PFAM: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: drm:Dred_3262 response regulator receiver protein
YP_001513936.1	TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: cdf:CD0118 putative subunit of oxidoreductase
YP_001513937.1	PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: cdf:CD0117 putative subunit of oxidoreductase
YP_001513938.1	catalyzes the coenzyme A-dependent oxidation of 3-methyl-2-oxobutanoate coupled to the reduction of ferredoxin producing S-(2-methylpropanoyl)-CoA
YP_001513939.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: tte:TTE2199 Ferredoxin 3
YP_001513940.1	KEGG: cdf:CD0114 putative ATP/GTP-binding protein
YP_001513941.1	catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate
YP_001513942.1	catalyzes the synthesis of butanoylphosphate from butanoyl-CoA and inorganic phosphate
YP_001513943.1	KEGG: bat:BAS4072 sensory box sigma-54 dependent DNA-binding response regulator; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; AAA ATPase
YP_001513944.1	PFAM: YbbR family protein; KEGG: tte:TTE2207 hypothetical protein
YP_001513945.1	PFAM: protein of unknown function DUF147; KEGG: tte:TTE2209 hypothetical protein
YP_001513946.1	PFAM: Shikimate/quinate 5-dehydrogenase; KEGG: tte:TTE2374 hypothetical protein
YP_001513947.1	PFAM: aminotransferase class-III; KEGG: tte:TTE2339 PLP-dependent aminotransferases
YP_001513948.1	PFAM: protein of unknown function DUF1576; KEGG: ctc:CTC00068 hypothetical protein
YP_001513949.1	KEGG: cno:NT01CX_2426 hypothetical protein
YP_001513950.1	TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin; glutaredoxin 2; KEGG: sfx:S4119 glutaredoxin 3
YP_001513951.1	KEGG: dsy:DSY2102 hypothetical protein
YP_001513952.1	PFAM: protein of unknown function DUF421; KEGG: csc:Csac_2112 protein of unknown function DUF421
YP_001513953.1	PFAM: protein of unknown function DUF542 ScdA domain protein; Hemerythrin HHE cation binding domain protein; KEGG: cac:CAC0071 uncharacterized conserved protein, YtfE E.coli ortholog
YP_001513954.1	PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: cpr:CPR_0036 transporter, putative
YP_001513955.1	PFAM: Peptidoglycan-binding domain 1 protein; ErfK/YbiS/YcfS/YnhG family protein; KEGG: cbo:CBO3179 hypothetical protein
YP_001513956.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dsy:DSY1005 hypothetical protein
YP_001513957.1	PFAM: transport system permease protein; KEGG: dsy:DSY1004 hypothetical protein
YP_001513958.1	PFAM: transport system permease protein; KEGG: dsy:DSY1003 hypothetical protein
YP_001513959.1	PFAM: periplasmic binding protein; KEGG: dsy:DSY1002 hypothetical protein
YP_001513960.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: cdf:CD2573 probable hydrolase
YP_001513961.1	PFAM: phosphoesterase PA-phosphatase related; KEGG: cbo:CBO0350 phosphatase
YP_001513962.1	PFAM: extracellular solute-binding protein family 1; KEGG: cbo:CBO1946 extracellular tungstate binding protein
YP_001513963.1	catalyzes the reduction of hydroxylamine to ammonia and water
YP_001513964.1	KEGG: mja:MJ0003 hypothetical protein
YP_001513965.1	KEGG: cdf:CD3073 hypothetical protein
YP_001513966.1	KEGG: cth:Cthe_2499 hypothetical protein
YP_001513967.1	PFAM: glycoside hydrolase family 25; KEGG: ssu:SSU05_0524 lyzozyme M1 (1,4-beta-N-acetylmuramidase)
YP_001513968.1	KEGG: cac:CAC0455 hypothetical protein
YP_001513969.1	PFAM: Na+/solute symporter; KEGG: cno:NT01CX_0299 sodium:solute symporter family protein
YP_001513970.1	PFAM: cyclase family protein; KEGG: rha:RHA1_ro03385 possible cyclase
YP_001513971.1	PFAM: protein of unknown function DUF849; KEGG: gtn:GTNG_2707 hypothetical cytosolic protein
YP_001513972.1	TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: rpc:RPC_0636 acetyl-CoA C-acetyltransferase
YP_001513973.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: PAS domain containing protein; AAA ATPase; KEGG: cbo:CBO3196 sigma54-binding transcriptional regulator
YP_001513974.1	PFAM: DNA polymerase beta domain protein region; KEGG: dsy:DSY4374 hypothetical protein
YP_001513975.1	60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth
YP_001513976.1	10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring
YP_001513977.1	PFAM: protein of unknown function DUF554; KEGG: pth:PTH_2912 uncharacterized membrane protein
YP_001513978.1	PFAM: HhH-GPD family protein; 8-oxoguanine DNA glycosylase domain protein; KEGG: cdf:CD0191 putative DNA glycosylase (DNA repair protein)
YP_001513980.1	KEGG: stp:Strop_1632 asparagine synthase (glutamine-hydrolyzing)
YP_001513981.1	KEGG: swo:Swol_2039 hypothetical protein
YP_001513982.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tte:TTE0848 ABC-type multidrug transport system, ATPase component
YP_001513983.1	KEGG: sto:ST1120 dihydropyrimidine dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase family protein; PFAM: dihydroorotate dehydrogenase; 4Fe-4S ferredoxin iron-sulfur binding domain protein
YP_001513984.1	PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: tte:TTE0201 Transcriptional regulator
YP_001513985.1	PFAM: amidohydrolase; Amidohydrolase 3; KEGG: cbo:CBO2072 cytosine deaminase
YP_001513986.1	PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: cbo:CBO2073 cytosine permease
YP_001513987.1	PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: cdf:CD0179 NAD-specific glutamate dehydrogenase
YP_001513988.1	KEGG: cth:Cthe_2070 hypothetical protein
YP_001513989.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cdf:CD0172A ferredoxin
YP_001513991.1	PFAM: regulatory protein MarR; KEGG: cpr:CPR_1135 transcriptional regulator, MarR family
YP_001513992.1	modulates transcription in response to the NADH/NAD(+) redox state
YP_001513993.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cdf:CD0170 putative ABC transporter, ATP-binding protein
YP_001513995.1	in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity
YP_001513996.1	TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: tte:TTE0537 Acetyltransferases
YP_001513997.1	PFAM: peptidase M22 glycoprotease; KEGG: cth:Cthe_1775 peptidase M22, glycoprotease
YP_001513998.1	PFAM: protein of unknown function UPF0079; KEGG: cdf:CD0149 putative ATP/GTP hydrolase
YP_001513999.1	KEGG: slo:Shew_1972 FMN-binding domain protein
YP_001514000.1	PFAM: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: cth:Cthe_1824 two component transcriptional regulator, AraC family
YP_001514001.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gme:Gmet_3432 histidine kinase
YP_001514002.1	KEGG: tte:TTE0534 hypothetical protein
YP_001514003.1	KEGG: dsy:DSY2530 hypothetical protein
YP_001514004.1	PFAM: amidohydrolase; Amidohydrolase 3; KEGG: tte:TTE0530 imidazolonepropionase and related amidohydrolase
YP_001514005.1	PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; KEGG: cth:Cthe_1955 RNA binding S1
YP_001514006.1	PFAM: flagellar protein FliS; KEGG: mta:Moth_0766 flagellar protein FliS
YP_001514007.1	PFAM: flagellin domain protein; KEGG: gka:GK3142 flagellar protein
YP_001514008.1	KEGG: cth:Cthe_0759 flagellar biosynthesis
YP_001514009.1	KEGG: cth:Cthe_0760 hypothetical protein
YP_001514010.1	PFAM: protein of unknown function DUF327; KEGG: cth:Cthe_2106 protein of unknown function DUF327
YP_001514011.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bld:BLi03297 close homolog to McpA methyl-accepting chemotaxis protein; RBL01413
YP_001514012.1	TIGRFAM: peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: cdf:CD0144 peptide chain release factor 2
YP_001514013.1	functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins
YP_001514014.1	KEGG: tte:TTE0519 hypothetical protein
YP_001514015.1	TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: ctc:CTC00325 SSU ribosomal protein S30P
YP_001514016.1	PFAM: FlgN family protein; KEGG: cth:Cthe_2216 hypothetical protein
YP_001514017.1	PFAM: flagellar protein FliS; KEGG: tte:TTE0506 Flagellar protein
YP_001514018.1	PFAM: flagellar hook-associated protein 2 domain protein; flagellar hook-associated 2 domain protein; flagellin hook IN repeat protein; KEGG: bcl:ABC3074 flagellar hook-associated protein FliD
YP_001514019.1	PFAM: flagellar protein FlaG protein; KEGG: cth:Cthe_2219 flagellar protein FlaG protein
YP_001514020.1	PFAM: aminotransferase class IV; KEGG: cac:CAC2226 enzyme of IlvE/PabC family (branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase)
YP_001514021.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ctc:CTC02521 NADH dehydrogenase, similar to nitrite reductase
YP_001514022.1	affects carbohydrate metabolism; has regulatory role in many processes
YP_001514023.1	binds to flagellin and appears to stabilize flagellin during flagella assembly
YP_001514024.1	KEGG: bsu:BG10723 transcriptional activator of arginine utilization operons (NtrC family); TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase
YP_001514025.1	PFAM: Na+/H+ antiporter NhaC; KEGG: cdf:CD0449 Na+/H+ antiporter
YP_001514026.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: drm:Dred_2931 ABC transporter related
YP_001514027.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: drm:Dred_2932 ABC transporter related
YP_001514028.1	PFAM: inner-membrane translocator; KEGG: bhe:BH08270 high-affinity branched-chain amino acid transporter, permease protein
YP_001514029.1	PFAM: inner-membrane translocator; KEGG: drm:Dred_2934 inner-membrane translocator
YP_001514030.1	PFAM: Extracellular ligand-binding receptor; KEGG: drm:Dred_2935 extracellular ligand-binding receptor
YP_001514031.1	KEGG: gsu:GSU1025 hypothetical protein
YP_001514032.1	TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; Metal-dependent hydrolase HDOD; KEGG: ctc:CTC01693 hypothetical protein
YP_001514033.1	KEGG: tte:TTE0491 flagellar protein
YP_001514034.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cpr:CPR_0440 lactoylglutathione lyase
YP_001514035.1	KEGG: cpe:CPE0799 hypothetical protein
YP_001514036.1	KEGG: cno:NT01CX_1890 glycosyltransferase
YP_001514037.1	PFAM: N-acetylneuraminic acid synthase domain; SAF domain protein; KEGG: cno:NT01CX_1891 sialic acid synthase
YP_001514038.1	PFAM: GCN5-related N-acetyltransferase; KEGG: cno:NT01CX_1889 hypothetical protein
YP_001514039.1	PFAM: GCN5-related N-acetyltransferase; KEGG: gfo:GFO_2021 GNAT family acetyltransferase-possibly polyamine acetyltransferase
YP_001514040.1	PFAM: acylneuraminate cytidylyltransferase; KEGG: cno:NT01CX_1888 spore coat polysaccharide biosynthesis protein SpsF
YP_001514041.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: cth:Cthe_2221 DegT/DnrJ/EryC1/StrS aminotransferase
YP_001514042.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: ctc:CTC01712 UDP-4-dehydro-6-deoxy-2-acetamido-D-glucose 4-reductase
YP_001514043.1	KEGG: gka:GK3130 hypothetical protein
YP_001514044.1	PFAM: protein of unknown function DUF115; KEGG: cth:Cthe_2235 protein of unknown function DUF115
YP_001514045.1	PFAM: flagellin domain protein; KEGG: cth:Cthe_2237 flagellin-like protein
YP_001514046.1	PFAM: histidine kinase HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: cbo:CBO0693 methyl-accepting chemotaxis protein
YP_001514047.1	TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; KEGG: bha:BH3620 flagellar hook-associated protein 3 (HAP3)
YP_001514048.1	TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: cth:Cthe_2243 flagellar hook-associated protein FlgK
YP_001514049.1	KEGG: cth:Cthe_2245 hypothetical protein
YP_001514050.1	KEGG: cth:Cthe_2246 anti-sigma-28 factor, FlgM
YP_001514051.1	KEGG: csc:Csac_1661 hypothetical protein
YP_001514052.1	KEGG: ppd:Ppro_2731 competence protein F, putative
YP_001514053.1	KEGG: tte:TTE0489 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member; TIGRFAM: helicase, RecD/TraA family; SMART: Helix-hairpin-helix DNA-binding class 1; AAA ATPase
YP_001514054.1	KEGG: cno:NT01CX_0746 hypothetical protein
YP_001514055.1	KEGG: drm:Dred_3084 hypothetical protein
YP_001514056.1	PFAM: protein of unknown function DUF1659
YP_001514057.1	TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: ban:BA0093 RNA polymerase sigma-30 factor
YP_001514058.1	catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase
YP_001514059.1	PFAM: putative small multi-drug export; KEGG: bha:BH1234 small multidrug export related protein
YP_001514060.1	KEGG: cth:Cthe_1229 spore germination protein-like protein
YP_001514061.1	PFAM: protein of unknown function DUF1292; KEGG: cno:NT01CX_1855 hypothetical protein
YP_001514062.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: drm:Dred_1346 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)
YP_001514063.1	in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP
YP_001514064.1	PFAM: extracellular solute-binding protein family 1; KEGG: cno:NT01CX_1229 bacterial extracellular solute-binding protein, putative
YP_001514065.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cno:NT01CX_1228 spermidine/putrescine ABC transporter, permease protein 2
YP_001514066.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cno:NT01CX_1227 ABC-type spermidine/putrescine transport system, permease protein 1
YP_001514067.1	KEGG: cno:NT01CX_1226 spermidine/putrescine ABC transporter ATP-binding subunit; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase
YP_001514068.1	KEGG: dsy:DSY1696 hypothetical protein
YP_001514069.1	PFAM: MgtC/SapB transporter; KEGG: cth:Cthe_1919 MgtC/SapB transporter
YP_001514070.1	TIGRFAM: gluconate transporter; PFAM: Gluconate transporter; Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: cbo:CBO2207 gluconate permease
YP_001514071.1	catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate)
YP_001514072.1	PFAM: type III effector Hrp-dependent outers; KEGG: cno:NT01CX_0636 hypothetical protein
YP_001514073.1	PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: plu:plu2511 hypothetical protein
YP_001514074.1	PFAM: Peptidoglycan-binding domain 1 protein; Peptidoglycan-binding LysM; KEGG: tte:TTE2219 LysM-repeat proteins and domains
YP_001514075.1	KEGG: cth:Cthe_2622 hypothetical protein
YP_001514076.1	PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: tte:TTE0173 Flagellar basal body and hook proteins
YP_001514077.1	PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: tte:TTE0172 Flagellar basal body and hook proteins
YP_001514078.1	TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl; KEGG: cth:Cthe_2619 cell shape determining protein, MreB/Mrl family
YP_001514079.1	TIGRFAM: Sporulation stage III transcriptional regulator SpoIIID; KEGG: cbo:CBO0162 stage III sporulation protein D
YP_001514080.1	PFAM: peptidase M23B; KEGG: cth:Cthe_2617 peptidase M23B
YP_001514081.1	TIGRFAM: SpoIID/LytB domain; Sporulation stage II protein D firmicutes; PFAM: Stage II sporulation D domain protein; KEGG: cdf:CD0124 stage II sporulation protein D
YP_001514082.1	adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active
YP_001514083.1	KEGG: tte:TTE0157 hypothetical protein
YP_001514084.1	PFAM: protein of unknown function DUF1694; KEGG: drm:Dred_0426 protein of unknown function DUF1694
YP_001514085.1	KEGG: dsy:DSY0850 hypothetical protein
YP_001514086.1	TIGRFAM: ATP synthase F1, epsilon subunit; PFAM: H+transporting two-sector ATPase delta/epsilon subunit; KEGG: bsu:BG10822 ATP synthase epsilon chain
YP_001514087.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit
YP_001514088.1	KEGG: cdf:CD3469 ATP synthase subunit gamma; TIGRFAM: ATP synthase F1, gamma subunit; PFAM: H+transporting two-sector ATPase gamma subunit
YP_001514089.1	produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit
YP_001514090.1	TIGRFAM: ATP synthase F1, delta subunit; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; KEGG: cdf:CD3471 ATP synthase subunit delta
YP_001514091.1	TIGRFAM: ATP synthase F0, B subunit; PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: cdf:CD3472 ATP synthase B chain
YP_001514092.1	produces ATP from ADP in the presence of a proton gradient across the membrane; subunit C is part of the membrane proton channel F0
YP_001514093.1	TIGRFAM: ATP synthase F0, A subunit; PFAM: H+transporting two-sector ATPase A subunit; KEGG: cpf:CPF_2458 ATP synthase F0, A subunit
YP_001514094.1	KEGG: cdf:CD3475 ATP synthase protein I
YP_001514095.1	KEGG: gme:Gmet_3357 hypothetical protein
YP_001514096.1	PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: ctc:CTC00311 UDP-N-acetylglucosamine 2-epimerase
YP_001514097.1	PFAM: glycosyl transferase family 4; KEGG: tte:TTE0154 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase
YP_001514098.1	PFAM: CMP/dCMP deaminase zinc-binding; KEGG: cth:Cthe_2599 CMP/dCMP deaminase, zinc-binding
YP_001514099.1	Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate
YP_001514100.1	KEGG: cpr:CPR_2173 ribose 5-phosphate isomerase B; TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase
YP_001514101.1	PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: pth:PTH_2826 protein-tyrosine-phosphatase
YP_001514102.1	TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5 domain protein; SUA5/yciO/yrdC domain; KEGG: cth:Cthe_2595 SUA5/YciO/YrdC/YwlC family protein
YP_001514103.1	PFAM: penicillin-binding protein transpeptidase; KEGG: cth:Cthe_3047 peptidoglycan glycosyltransferase
YP_001514104.1	PFAM: cell cycle protein; KEGG: cth:Cthe_3046 cell cycle protein
YP_001514105.1	PFAM: Forkhead-associated protein; KEGG: cth:Cthe_3045 FHA domain containing protein
YP_001514106.1	PFAM: zinc/iron permease; KEGG: tte:TTE0144 predicted divalent heavy-metal cations transporter
YP_001514107.1	recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2
YP_001514108.1	TIGRFAM: modification methylase, HemK family; PFAM: O-methyltransferase family 3; methyltransferase small; KEGG: cdf:CD3485 protein methyltransferase
YP_001514109.1	PFAM: protein of unknown function DUF1385; KEGG: tte:TTE0141 hypothetical protein
YP_001514110.1	PFAM: ABC-2 type transporter; KEGG: oih:OB1073 hypothetical conserved protein
YP_001514111.1	PFAM: ABC-2 type transporter; KEGG: oih:OB1072 putative ABC-2 type transport system permease protein
YP_001514112.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bha:BH1054 putative ABC-2 type transport system ATP-binding protein
YP_001514113.1	KEGG: bcz:BCZK3023 response regulator
YP_001514114.1	leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase
YP_001514115.1	PFAM: protein of unknown function DUF368; KEGG: tde:TDE2250 hypothetical protein
YP_001514116.1	PFAM: thymidine kinase; KEGG: tte:TTE0140 Thymidine kinase
YP_001514117.1	RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome
YP_001514118.1	An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes
YP_001514119.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: swo:Swol_0314 hypothetical protein
YP_001514120.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cpf:CPF_1532 amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family
YP_001514121.1	PFAM: extracellular solute-binding protein family 3; KEGG: cdf:CD1774 amino acid ABC transporter, substrate-binding protein
YP_001514122.1	type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese
YP_001514123.1	KEGG: cno:NT01CX_0748 transaldolase; TIGRFAM: putative transaldolase; PFAM: Transaldolase
YP_001514124.1	PFAM: protein of unknown function DUF849; KEGG: rfr:Rfer_3885 protein of unknown function DUF849
YP_001514125.1	KEGG: fnu:FN1869 hypothetical protein
YP_001514126.1	PFAM: sodium:neurotransmitter symporter; KEGG: amt:Amet_0315 sodium:neurotransmitter symporter
YP_001514127.1	PFAM: sodium:neurotransmitter symporter; KEGG: amt:Amet_0315 sodium:neurotransmitter symporter
YP_001514128.1	PFAM: S-layer domain protein; KEGG: amt:Amet_0191 S-layer domain protein
YP_001514129.1	PFAM: S-layer domain protein; KEGG: amt:Amet_0182 S-layer domain protein
YP_001514130.1	KEGG: amt:Amet_0181 S-layer domain protein
YP_001514131.1	PFAM: cell surface receptor IPT/TIG domain protein; Fibronectin type III domain protein; KEGG: amt:Amet_0180 fibronectin, type III domain protein
YP_001514133.1	KEGG: dsy:DSY3259 hypothetical protein
YP_001514135.1	KEGG: csc:Csac_0095 hypothetical protein
YP_001514136.1	PFAM: histidine kinase HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: dsy:DSY4989 hypothetical protein
YP_001514137.1	KEGG: tpt:Tpet_1658 hypothetical protein
YP_001514138.1	PFAM: acriflavin resistance protein; KEGG: dsy:DSY3359 hypothetical protein
YP_001514139.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: dsy:DSY3360 hypothetical protein
YP_001514140.1	PFAM: copper amine oxidase domain protein
YP_001514141.1	PFAM: protein of unknown function DUF214; KEGG: cac:CAC0320 predicted permease
YP_001514142.1	TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: csc:Csac_2448 efflux transporter, RND family, MFP subunit
YP_001514143.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: smu:SMU.863 putative ABC transporter, ATP-binding protein
YP_001514144.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: dsy:DSY1327 hypothetical protein
YP_001514145.1	PFAM: protein of unknown function DUF214; KEGG: dsy:DSY4806 hypothetical protein
YP_001514146.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: swo:Swol_1715 ATPase
YP_001514147.1	PFAM: regulatory protein TetR; KEGG: bja:blr3443 transcriptional regulatory protein
YP_001514148.1	KEGG: cth:Cthe_1764 outer membrane protein-like protein
YP_001514150.1	PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: lpl:lp_1892 integrase/recombinase
YP_001514151.1	KEGG: gka:GK3186 surface layer (S-layer) glycoprotein
YP_001514152.1	PFAM: transposase mutator type; KEGG: cth:Cthe_1533 transposase, mutator type
YP_001514153.1	KEGG: btl:BALH_0800 S-layer protein
YP_001514154.1	PFAM: S-layer domain protein; KEGG: sth:STH44 putative middle wall protein precursor
YP_001514155.1	PFAM: S-layer domain protein; KEGG: cth:Cthe_2384 S-layer-like domain containing protein
YP_001514156.1	KEGG: cth:Cthe_2681 serine phosphatase; TIGRFAM: Sporulation stage II protein E; PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein
YP_001514157.1	PFAM: Ppx/GppA phosphatase; KEGG: cdf:CD3491 putative exopolyphosphatase
YP_001514158.1	PFAM: RNA binding S1 domain protein; KEGG: cbo:CBO3529 RNA binding protein
YP_001514159.1	PFAM: Septum formation initiator; KEGG: bha:BH0076 cell-division initiation protein (septum formation)
YP_001514160.1	TIGRFAM: Spore cortex biosynthesis protein YabQ; KEGG: tte:TTE2446 hypothetical protein
YP_001514161.1	PFAM: YabP family protein; KEGG: tte:TTE2450 hypothetical protein
YP_001514162.1	TIGRFAM: SpoIID/LytB domain; PFAM: Stage II sporulation D domain protein; KEGG: tte:TTE2451 sporulation protein and related proteins
YP_001514163.1	PFAM: RNA-binding S4 domain protein; KEGG: cpf:CPF_2801 S4 domain protein
YP_001514164.1	PFAM: histone family protein DNA-binding protein; KEGG: tva:TVAG_243740 DNA-binding protein HU, putative
YP_001514165.1	PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; MazG nucleotide pyrophosphohydrolase; KEGG: cbo:CBO3535 tetrapyrrole (corrin/porphyrin) methylase and nucleoside triphosphate pyrophosphohydrolase fusion protein
YP_001514166.1	PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: cdf:CD3498 stage V sporulation protein B
YP_001514167.1	TIGRFAM: transcriptional regulator, AbrB family; Sporulation stage V protein T; PFAM: SpoVT/AbrB domain protein; KEGG: cth:Cthe_2655 transcriptional regulator, AbrB family
YP_001514168.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: cdf:CD3500 putative foldase lipoprotein (late stage protein export lipoprotein)
YP_001514169.1	KEGG: tte:TTE2565 Transcription-repair coupling factor - superfamily II helicase; TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases
YP_001514170.1	KEGG: tte:TTE2566 hypothetical protein
YP_001514171.1	Enables the recycling of peptidyl-tRNAs produced at termination of translation
YP_001514172.1	KEGG: csc:Csac_1204 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase
YP_001514173.1	forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis
YP_001514174.1	stage V sporulation protein G; essential for spore formation and a negative regulator of asymmetric septation in Bacillus; involved in methicillin-resistance, biofilm formation and capsular polysaccharide synthesis in Staphylococcus
YP_001514175.1	TIGRFAM: pur operon repressor; PFAM: phosphoribosyltransferase; purine repressor; KEGG: cdf:CD3517 putative transcriptional repressor
YP_001514176.1	Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis
YP_001514177.1	TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: tte:TTE0026 transcriptional regulator
YP_001514178.1	PFAM: transglutaminase domain protein; KEGG: tte:TTE2213 transglutaminase-like enzyme, putative cysteine protease
YP_001514179.1	PFAM: protein of unknown function DUF58; KEGG: tte:TTE2214 hypothetical protein
YP_001514180.1	PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: tte:TTE2215 MoxR-like ATPases
YP_001514181.1	TIGRFAM: peptidase T-like protein; PFAM: peptidase M20; peptidase M42 family protein; peptidase dimerisation domain protein; KEGG: cdf:CD3521 putative peptidase
YP_001514182.1	PFAM: C4-dicarboxylate anaerobic carrier; AbgT putative transporter; short chain fatty acid transporter; KEGG: ctc:CTC01323 aminobenzoyl-glutamate transport protein
YP_001514183.1	KEGG: tte:TTE0114 hypothetical protein
YP_001514184.1	catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin
YP_001514185.1	KEGG: cdf:CD3524 putative DNA-binding protein; TIGRFAM: primase/topoisomerase like protein; PFAM: TOPRIM domain protein; SMART: Toprim sub domain protein
YP_001514186.1	PFAM: protein of unknown function DUF348; 3D domain protein; G5 domain protein; KEGG: tte:TTE0112 hypothetical protein
YP_001514187.1	PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: cth:Cthe_0898 metal dependent phosphohydrolase
YP_001514188.1	TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: cdf:CD3539 putative deoxyribonuclease
YP_001514189.1	TIGRFAM: methionyl-tRNA synthetase; methionyl-tRNA synthetase, beta subunit; PFAM: t-RNA-binding domain protein; tRNA synthetase class I (M); KEGG: cdf:CD3540 methionyl-tRNA synthetase
YP_001514191.1	PFAM: nucleoside recognition domain protein; KEGG: ctc:CTC00239 spore maturation protein B
YP_001514192.1	PFAM: nucleoside recognition domain protein; KEGG: cdf:CD3542 spore maturation protein A
YP_001514193.1	TIGRFAM: putative nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase and related; KEGG: cdf:CD3543 putative nicotinate phosphribosyltransferase
YP_001514194.1	TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: cth:Cthe_2100 transcriptional regulator, AbrB family
YP_001514195.1	PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: cdf:CD3546 putative corrin/porphyrin methyltransferase
YP_001514196.1	PFAM: methyltransferase small; KEGG: cdf:CD3547 hypothetical protein
YP_001514198.1	KEGG: pth:PTH_2611 hypothetical membrane protein
YP_001514199.1	KEGG: mmu:639469 hypothetical protein LOC639469
YP_001514200.1	Heat shock-induced
YP_001514201.1	PFAM: Na+/H+ antiporter NhaC; KEGG: chy:CHY_1625 Na+/H+ antiporter
YP_001514202.1	PFAM: Chromate transporter; KEGG: cpr:CPR_2214 probable chromate transport protein, putative
YP_001514203.1	PFAM: Chromate transporter; KEGG: cpf:CPF_2509 chromate transport protein
YP_001514204.1	PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: cno:NT01CX_1825 ABC-type multidrug/protein/lipid transport system, ATPase
YP_001514205.1	PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: cno:NT01CX_1824 ABC transporter, ATP-binding protein
YP_001514206.1	PFAM: regulatory protein MarR; KEGG: cdf:CD2212 MarR-family transcriptional regulator
YP_001514207.1	PFAM: Di-trans-poly-cis-decaprenylcistransferase; KEGG: cac:CAC1432 undecaprenyl pyrophosphate synthase related enzyme
YP_001514208.1	PFAM: phosphoesterase DHHA1; Threonyl/alanyl tRNA synthetase SAD; KEGG: cdf:CD2163 putative RNA-binding protein
YP_001514209.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dsy:DSY4690 hypothetical protein
YP_001514210.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dsy:DSY4689 hypothetical protein
YP_001514211.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dsy:DSY4688 hypothetical protein
YP_001514212.1	PFAM: extracellular solute-binding protein family 3; KEGG: dsy:DSY4687 hypothetical protein
YP_001514213.1	PFAM: CDP-alcohol phosphatidyltransferase; KEGG: dsy:DSY2617 hypothetical protein
YP_001514214.1	KEGG: cdf:CD1121 glycerol dehydratase activator; TIGRFAM: glycyl-radical enzyme activating protein family; PFAM: Radical SAM domain protein
YP_001514215.1	KEGG: cdf:CD1120 glycerol dehydratase; TIGRFAM: pyruvate formate-lyase; PFAM: formate C-acetyltransferase glycine radical; pyruvate formate-lyase PFL
YP_001514216.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: ppu:PP_4345 transcriptional regulator, GntR family
YP_001514217.1	TIGRFAM: flavocytochrome c; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FMN-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: amt:Amet_3460 flavocytochrome c
YP_001514218.1	PFAM: regulatory protein TetR; KEGG: amt:Amet_3505 transcriptional regulator, TetR family
YP_001514219.1	PFAM: Na+/solute symporter; KEGG: mfa:Mfla_1786 Na+/solute symporter
YP_001514220.1	KEGG: ctc:CTC01751 thiamin-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase
YP_001514221.1	catalyzes the formation of 4-methyl-5-(2-phosphoethyl)-thiazole and ADP from 4-methyl-5-(2-hydroxyethyl)-thiazole and ATP
YP_001514222.1	TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: amt:Amet_1249 phosphomethylpyrimidine kinase
YP_001514223.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cdf:CD2577 probable short chain dehydrogenase
YP_001514224.1	PFAM: SAICAR synthetase; KEGG: dsy:DSY0789 hypothetical protein
YP_001514225.1	PFAM: branched-chain amino acid transport system II carrier protein; KEGG: cno:NT01CX_1664 branched-chain amino acid transport system II carrier protein
YP_001514226.1	PFAM: DNA mismatch repair protein MutS domain protein; SMART: MutS III domain protein; KEGG: bcl:ABC4018 DNA mismatch repair protein, MutS family
YP_001514227.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: cdf:CD2570 two-component sensor histidine kinase
YP_001514228.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cpf:CPF_0459 DNA-binding response regulator
YP_001514229.1	PFAM: protein of unknown function DUF534; KEGG: cdf:CD0876 ABC transporter, substrate-binding lipoprotein
YP_001514230.1	PFAM: inner-membrane translocator; KEGG: cbo:CBO1163 ABC transporter, permease protein
YP_001514231.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: fnu:FN2079 ABC transporter ATP-binding protein
YP_001514232.1	PFAM: protein of unknown function DUF534; KEGG: cdf:CD0873 ABC transporter, substrate-binding lipoprotein
YP_001514233.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: cbo:CBO2013 membrane protein
YP_001514234.1	PFAM: Xanthine/uracil/vitamin C permease; KEGG: bha:BH1513 hypothetical protein
YP_001514235.1	PFAM: sugar fermentation stimulation protein; KEGG: cno:NT01CX_0808 sugar fermentation stimulation protein
YP_001514236.1	PFAM: protein of unknown function DUF188; KEGG: cac:CAC2825 uncharacterized conserved protein, YQXD B.subtilis ortholog
YP_001514237.1	PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FMN-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ctc:CTC00811 fumarate reductase flavoprotein subunit precursor
YP_001514238.1	TIGRFAM: cytidyltransferase-related domain; PFAM: cytidylyltransferase; KEGG: cbo:CBO2601 transferase
YP_001514239.1	KEGG: cbo:CBO2602 malate/lactate dehydrogenase
YP_001514240.1	PFAM: NADPH-dependent FMN reductase; KEGG: cbo:CBO2603 hypothetical protein
YP_001514241.1	TIGRFAM: ferrous iron transport protein B; PFAM: GTP-binding protein HSR1-related; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; nucleoside recognition domain protein; KEGG: ppr:PBPRB1904 hypothetical ferrous ion transport protein B
YP_001514242.1	PFAM: FeoA family protein; KEGG: cbo:CBO1028 ferrous iron transport protein
YP_001514243.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: ctc:CTC00146 thiol:disulfide interchange protein TlpA
YP_001514244.1	PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: ctc:CTC00145 cytochrome c-type biogenesis protein ccdA
YP_001514245.1	PFAM: GerA spore germination protein; KEGG: ctc:CTC02096 spore germination protein KA
YP_001514246.1	PFAM: spore germination B3 GerAC family protein; KEGG: ctc:CTC02095 spore germination protein KC
YP_001514247.1	TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: ctc:CTC02094 spore germination protein KB
YP_001514248.1	PFAM: Heavy metal transport/detoxification protein; KEGG: cth:Cthe_1849 heavy metal transport/detoxification protein
YP_001514249.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bcl:ABC1939 acetyltransferase
YP_001514250.1	PFAM: GCN5-related N-acetyltransferase; KEGG: btk:BT9727_2346 acetyltransferase, GNAT family
YP_001514251.1	PFAM: protein of unknown function DUF454; KEGG: cpr:CPR_0217 hypothetical protein
YP_001514252.1	PFAM: Helix-turn-helix type 11 domain protein; KEGG: lic:LIC11146 putative transcriptional regulator (DeoR family)
YP_001514253.1	PFAM: transcription activator effector binding; KEGG: cdf:CD2419 AraC-family transcriptional regulator
YP_001514254.1	KEGG: cpr:CPR_0632 hypothetical protein
YP_001514255.1	PFAM: GCN5-related N-acetyltransferase; KEGG: dsy:DSY1041 hypothetical protein
YP_001514256.1	PFAM: GCN5-related N-acetyltransferase; KEGG: dsy:DSY0298 hypothetical protein
YP_001514257.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bcl:ABC0271 hypothetical protein
YP_001514259.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: bcl:ABC2712 transcriptional regulator, Lrp/AsnC family
YP_001514260.1	TIGRFAM: kynureninase; PFAM: aminotransferase class V; KEGG: gtn:GTNG_3166 kynureninase
YP_001514261.1	TIGRFAM: alkylphosphonate utilization operon protein PhnA; PFAM: PhnA protein; KEGG: bcz:pE33L466_0444 alkylphosphonate uptake protein
YP_001514262.1	KEGG: btk:BT9727_2493 hypothetical protein
YP_001514263.1	TIGRFAM: DNA binding domain, excisionase family; PFAM: regulatory protein MerR; KEGG: cbo:CBO2132 hypothetical protein
YP_001514264.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mth:MTH758 S-D-lactoylglutathione methylglyoxal lyase
YP_001514265.1	PFAM: beta-lactamase domain protein; KEGG: bca:BCE_2724 hypothetical protein
YP_001514266.1	PFAM: Na+/H+ antiporter NhaC; KEGG: cac:CAC0744 Na+/H+ antiporter, ortholog YQKI B.subtilis
YP_001514267.1	catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase
YP_001514268.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: cbo:CBO1023 hydrolase
YP_001514269.1	TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: nme:NMB1647 amino acid symporter, putative
YP_001514270.1	KEGG: cbo:CBO3576 methionine aminopeptidase 2; TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; SEC-C motif domain protein
YP_001514271.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: cbo:CBO3575 AraC-family transcriptional regulator
YP_001514272.1	PFAM: helix-turn-helix- domain containing protein AraC type; transcription activator effector binding; KEGG: dsy:DSY1233 hypothetical protein
YP_001514274.1	PFAM: protein of unknown function DUF6 transmembrane; Protein of unknown function DUF250; KEGG: bld:BLi00477 similar to proteins; RBL01685
YP_001514275.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: cbo:CBO0623 AraC-family transcriptional regulator
YP_001514276.1	PFAM: nitroreductase; KEGG: mta:Moth_1212 nitroreductase
YP_001514277.1	KEGG: sma:SAV2861 ABC transporter integral membrane protein
YP_001514278.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sen:SACE_7260 putative ABC transporter ATP-binding subunit
YP_001514279.1	PFAM: regulatory protein MerR; KEGG: lin:lin0530 hypothetical protein
YP_001514280.1	PFAM: protein of unknown function DUF1697; KEGG: mca:MCA2327 hypothetical protein
YP_001514282.1	PFAM: protein of unknown function DUF89; KEGG: pho:PH1575 hypothetical protein
YP_001514283.1	KEGG: btk:BT9727_4351 hypothetical protein
YP_001514284.1	TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: cno:NT01CX_0693 RNA polymerase sigma-70 factor, ECF subfamily
YP_001514285.1	TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: dsy:DSY1225 hypothetical protein
YP_001514286.1	PFAM: GCN5-related N-acetyltransferase; KEGG: cpr:CPR_1153 probable acetyltransferase domain containing protein
YP_001514287.1	PFAM: regulatory protein LuxR; KEGG: cac:CAC0445 protein, containing LuxR family transcriptional regulator HTH domain
YP_001514288.1	PFAM: metallophosphoesterase; KEGG: bca:BCE_2172 serine/threonine phosphatase, putative
YP_001514289.1	PFAM: pentapeptide repeat protein; KEGG: cac:CAC0073 uncharacterized protein, ortholog of YYBG B.subtilis
YP_001514291.1	TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: bsu:BG13019 RNA polymerase ECF-type sigma factor
YP_001514292.1	PFAM: regulatory protein MerR; Methyltransferase type 11; Methyltransferase type 12; KEGG: cac:CAC2451 SoxR family transcriptional regulator fused to SAM-dependent methyltransferase
YP_001514293.1	Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription
YP_001514295.1	KEGG: vvy:VVA1164 hypothetical protein
YP_001514296.1	KEGG: bcl:ABC1987 hypothetical protein
YP_001514298.1	PFAM: amidohydrolase; Amidohydrolase 3; KEGG: ilo:IL0044 amidohydrolase family enzyme
YP_001514299.1	KEGG: aau:AAur_1361 hypothetical protein
YP_001514300.1	PFAM: regulatory protein MerR; transcription activator effector binding; KEGG: cdf:CD0616 MerR-family transcriptional regulator
YP_001514301.1	PFAM: alpha/beta hydrolase fold; KEGG: btl:BALH_4420 hydrolase, alpha/beta fold family
YP_001514302.1	SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA
YP_001514303.1	KEGG: tte:TTE2682 hypothetical protein
YP_001514304.1	PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: cdf:CD3284 probable protease
YP_001514305.1	PFAM: beta-lactamase domain protein; KEGG: cdf:CD3651 putative metallo-beta-lactamase superfamily protein
YP_001514306.1	TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); KEGG: cno:NT01CX_0948 UDP-N-acetylglucosamine 1-carboxyvinyltransferase
YP_001514307.1	KEGG: tte:TTE2685 hypothetical protein
YP_001514310.1	KEGG: tte:TTE2688 sensory transduction histidine kinases; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001514311.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: csc:Csac_2559 two component transcriptional regulator, winged helix family
YP_001514312.1	KEGG: tte:TTE2690 hypothetical protein
YP_001514313.1	PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: oih:OB2375 intracellular alkaline serine proteinase
YP_001514314.1	PFAM: EAL domain protein; Metal-dependent hydrolase HDOD; KEGG: dsy:DSY2436 hypothetical protein
YP_001514315.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: ctc:CTC01983 response regulator protein
YP_001514316.1	PFAM: chemotaxis sensory transducer; KEGG: cbo:CBO0693 methyl-accepting chemotaxis protein
YP_001514317.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: dsy:DSY0459 hypothetical protein
YP_001514318.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; glycoside hydrolase family 2 sugar binding; histidine kinase internal region; KEGG: bld:BLi00599 YwpD
YP_001514319.1	PFAM: Peptidoglycan-binding LysM; peptidase M23B; G5 domain protein; KEGG: tte:TTE2691 membrane proteins related to metalloendopeptidase
YP_001514320.1	PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: cdf:CD3652 putative peptidase
YP_001514321.1	TIGRFAM: primosome, DnaD subunit; PFAM: DnaD and phage-associated region; KEGG: cdf:CD3653 hypothetical protein
YP_001514322.1	acts to load the DnaB helicase onto the initiation site during DNA replication
YP_001514323.1	PFAM: GCN5-related N-acetyltransferase; KEGG: rrs:RoseRS_1262 GCN5-related N-acetyltransferase
YP_001514324.1	TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; KEGG: cdf:CD3657 replicative DNA helicase
YP_001514325.1	in Escherichia coli this protein is wrapped around the base of the L1 stalk
YP_001514326.1	PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: cth:Cthe_2258 phosphoesterase, RecJ-like protein
YP_001514327.1	KEGG: cdf:CD3660 hypothetical protein
YP_001514328.1	KEGG: cdf:CD3661 hypothetical protein
YP_001514329.1	PFAM: sigmaK-factor processing regulatory BofA; KEGG: cth:Cthe_2389 sigmaK-factor processing regulatory BofA
YP_001514330.1	KEGG: mta:Moth_0030 hypothetical protein
YP_001514331.1	PFAM: PhoH family protein; SMART: Nucleotide binding protein PINc; KEGG: gtn:GTNG_0940 PhoH protein
YP_001514332.1	TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; KEGG: cbo:CBO0518 oxygen binding protein
YP_001514333.1	PFAM: Rubrerythrin; KEGG: ctc:CTC02638 rubrerythrin
YP_001514334.1	PFAM: heat shock protein DnaJ domain protein; KEGG: ava:Ava_0379 heat shock protein DnaJ
YP_001514335.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH0989 transcriptional regulator (AraC/XylS family)
YP_001514336.1	PFAM: putative esterase; KEGG: bld:BLi00408 hypothetical protein
YP_001514337.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bca:BCE_3768 iron compound ABC transporter, ATP-binding protein
YP_001514338.1	PFAM: transport system permease protein; KEGG: bce:BC3736 iron(III) dicitrate transport system permease protein fecC
YP_001514339.1	PFAM: transport system permease protein; KEGG: bcz:BCZK3494 iron(III) dicitrate transport system permease
YP_001514340.1	PFAM: periplasmic binding protein; KEGG: bce:BC3738 iron(III) dicitrate-binding protein
YP_001514341.1	PFAM: AAA-4 family protein; KEGG: dsy:DSY4828 hypothetical protein
YP_001514342.1	KEGG: sfu:Sfum_3494 hypothetical protein
YP_001514343.1	PFAM: polysaccharide deacetylase; KEGG: tte:TTE0866 predicted xylanase/chitin deacetylase
YP_001514344.1	KEGG: dsy:DSY4674 hypothetical protein
YP_001514345.1	PFAM: permease; KEGG: dsy:DSY4678 hypothetical protein
YP_001514346.1	PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: cth:Cthe_1110 protein tyrosine phosphatase
YP_001514347.1	PFAM: regulatory protein ArsR; KEGG: cbo:CBO0753 arsenical resistance operon repressor
YP_001514349.1	PFAM: Na+/H+ antiporter NhaC; KEGG: hma:rrnAC0229 Na+/H+ antiporter
YP_001514350.1	PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: cdf:CD0444 putative pyridoxal-phosphate dependent enzyme
YP_001514351.1	KEGG: tte:TTE1235 hypothetical protein
YP_001514352.1	PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: cdf:CD1739 two-component response regulator
YP_001514353.1	KEGG: cdf:CD1738 two-component sensor histidine kinase; TIGRFAM: PAS sensor protein; PFAM: extracellular solute-binding protein family 3; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: PAS domain containing protein
YP_001514354.1	PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: bce:BC0192 acylamino-acid-releasing enzyme
YP_001514355.1	KEGG: mma:MM3347 hypothetical protein
YP_001514356.1	KEGG: cth:Cthe_0744 copper amine oxidase-like protein
YP_001514359.1	PFAM: LytTr DNA-binding region; KEGG: mta:Moth_1621 transcriptional regulator, LytR/AlgR family
YP_001514361.1	TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS); KEGG: tte:TTE2190 glucosamine--fructose-6-phosphate aminotransferase (isomerizing)
YP_001514362.1	KEGG: tte:TTE2173 hypothetical protein
YP_001514363.1	PFAM: helix-turn-helix domain protein; KEGG: tte:TTE2174 predicted transcriptional regulator
YP_001514364.1	KEGG: mta:Moth_1682 hypothetical protein
YP_001514365.1	PFAM: NUDIX hydrolase; KEGG: lwe:lwe1264 MutT/NUDIX family hydrolase
YP_001514366.1	PFAM: Auxin Efflux Carrier; KEGG: cbo:CBO2572 transporter protein
YP_001514367.1	PFAM: Domain of unknown function DUF1905; KEGG: rci:RCIX849 hypothetical protein
YP_001514368.1	KEGG: bha:BH2268 hypothetical protein
YP_001514369.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bld:BLi00324 YvbK
YP_001514370.1	PFAM: Peptidoglycan-binding domain 1 protein; KEGG: lca:LSEI_2197 hypothetical protein
YP_001514371.1	PFAM: helix-turn-helix- domain containing protein AraC type; transcription activator effector binding; KEGG: bce:BC4832 transcriptional regulator, AraC family
YP_001514372.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bca:BCE_3382 acetyltransferase, GNAT family
YP_001514374.1	KEGG: pgi:PG1407 nitroimidazole resistance protein, putative
YP_001514375.1	KEGG: cth:Cthe_2277 hypothetical protein
YP_001514376.1	PFAM: ribosomal RNA adenine methylase transferase; KEGG: spi:MGAS10750_Spy1703 rRNA adenine N-6-methyltransferase
YP_001514377.1	PFAM: NUDIX hydrolase; KEGG: mac:MA1648 MutT/NUDIX family protein
YP_001514378.1	PFAM: protein of unknown function DUF606; KEGG: ctc:CTC00140 hypothetical protein
YP_001514379.1	involved in a recombinational process of DNA repair, independent of the recBC complex
YP_001514380.1	PFAM: conserved hypothetical protein; KEGG: cno:NT01CX_0824 conserved hypothetical protein TIGR00103
YP_001514381.1	catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA
YP_001514382.1	KEGG: cth:Cthe_2711 hypothetical protein
YP_001514383.1	PFAM: protein of unknown function DUF1256; KEGG: cth:Cthe_2165 protein of unknown function DUF1256
YP_001514384.1	PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: cdf:CD1627 putative D-alanyl-D-alanine carboxypeptidase
YP_001514385.1	KEGG: cdf:CD1626 putative D-alanine:D-alanine ligase (putative vancomycin/teicoplanin A-type resistance protein); TIGRFAM: D-alanine--D-alanine ligase; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; D-alanine--D-alanine ligase domain protein
YP_001514386.1	PFAM: VanW family protein; KEGG: efa:EF2296 vancomycin B-type resistance protein VanW
YP_001514388.1	KEGG: cth:Cthe_0718 hypothetical protein
YP_001514389.1	PFAM: diacylglycerol kinase catalytic region; KEGG: tte:TTE2787 hypothetical protein
YP_001514390.1	KEGG: cno:NT01CX_0879 hypothetical protein
YP_001514391.1	TIGRFAM: cysteine desulfurase family protein; PFAM: aminotransferase class V; Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: cdf:CD3670 putative selenocysteine lyase
YP_001514392.1	TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: tte:TTE2790 predicted Transcriptional regulator
YP_001514393.1	PFAM: Cobyrinic acid ac-diamide synthase; KEGG: cdf:CD3672 sporulation initiation inhibitor
YP_001514394.1	TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: cdf:CD3673 putative stage 0 sporulation protein
YP_001514395.1	glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA
YP_001514396.1	GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs
YP_001514397.1	in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE
YP_001514398.1	PFAM: single-stranded nucleic acid binding R3H domain protein; KH type 1 domain protein; KEGG: cbo:CBO3644 SpoIIIJ associated protein
YP_001514399.1	PFAM: 60 kDa inner membrane insertion protein; KEGG: cdf:CD3678 putative sporulation membrane protein
YP_001514400.1	PFAM: protein of unknown function DUF37; KEGG: cbo:CBO3646 hypothetical protein
YP_001514401.1	protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates
YP_001514402.1	in Escherichia coli transcription of this gene is enhanced by polyamines