-- dump date 20240506_002234 -- class Genbank::Contig -- table contig_comment -- id comment NC_014212.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP002042.1.REFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272REFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at theREFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ)REFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de)REFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)REFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANLREFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12REFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12REFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7REFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755REFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699REFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616REFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616REFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56REFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47REFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3REFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3 Pseudo Genes (total) :: 83REFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3 Pseudo Genes (total) :: 83 CDSs (without protein) :: 83REFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3 Pseudo Genes (total) :: 83 CDSs (without protein) :: 83 Pseudo Genes (ambiguous residues) :: 0 of 83REFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3 Pseudo Genes (total) :: 83 CDSs (without protein) :: 83 Pseudo Genes (ambiguous residues) :: 0 of 83 Pseudo Genes (frameshifted) :: 28 of 83REFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3 Pseudo Genes (total) :: 83 CDSs (without protein) :: 83 Pseudo Genes (ambiguous residues) :: 0 of 83 Pseudo Genes (frameshifted) :: 28 of 83 Pseudo Genes (incomplete) :: 62 of 83REFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3 Pseudo Genes (total) :: 83 CDSs (without protein) :: 83 Pseudo Genes (ambiguous residues) :: 0 of 83 Pseudo Genes (frameshifted) :: 28 of 83 Pseudo Genes (incomplete) :: 62 of 83 Pseudo Genes (internal stop) :: 5 of 83REFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3 Pseudo Genes (total) :: 83 CDSs (without protein) :: 83 Pseudo Genes (ambiguous residues) :: 0 of 83 Pseudo Genes (frameshifted) :: 28 of 83 Pseudo Genes (incomplete) :: 62 of 83 Pseudo Genes (internal stop) :: 5 of 83 Pseudo Genes (multiple problems) :: 10 of 83REFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3 Pseudo Genes (total) :: 83 CDSs (without protein) :: 83 Pseudo Genes (ambiguous residues) :: 0 of 83 Pseudo Genes (frameshifted) :: 28 of 83 Pseudo Genes (incomplete) :: 62 of 83 Pseudo Genes (internal stop) :: 5 of 83 Pseudo Genes (multiple problems) :: 10 of 83 CRISPR Arrays :: 8REFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3 Pseudo Genes (total) :: 83 CDSs (without protein) :: 83 Pseudo Genes (ambiguous residues) :: 0 of 83 Pseudo Genes (frameshifted) :: 28 of 83 Pseudo Genes (incomplete) :: 62 of 83 Pseudo Genes (internal stop) :: 5 of 83 Pseudo Genes (multiple problems) :: 10 of 83 CRISPR Arrays :: 8 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3 Pseudo Genes (total) :: 83 CDSs (without protein) :: 83 Pseudo Genes (ambiguous residues) :: 0 of 83 Pseudo Genes (frameshifted) :: 28 of 83 Pseudo Genes (incomplete) :: 62 of 83 Pseudo Genes (internal stop) :: 5 of 83 Pseudo Genes (multiple problems) :: 10 of 83 CRISPR Arrays :: 8 ##Genome-Annotation-Data-END## ##Metadata-START##REFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3 Pseudo Genes (total) :: 83 CDSs (without protein) :: 83 Pseudo Genes (ambiguous residues) :: 0 of 83 Pseudo Genes (frameshifted) :: 28 of 83 Pseudo Genes (incomplete) :: 62 of 83 Pseudo Genes (internal stop) :: 5 of 83 Pseudo Genes (multiple problems) :: 10 of 83 CRISPR Arrays :: 8 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946REFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3 Pseudo Genes (total) :: 83 CDSs (without protein) :: 83 Pseudo Genes (ambiguous residues) :: 0 of 83 Pseudo Genes (frameshifted) :: 28 of 83 Pseudo Genes (incomplete) :: 62 of 83 Pseudo Genes (internal stop) :: 5 of 83 Pseudo Genes (multiple problems) :: 10 of 83 CRISPR Arrays :: 8 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542REFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3 Pseudo Genes (total) :: 83 CDSs (without protein) :: 83 Pseudo Genes (ambiguous residues) :: 0 of 83 Pseudo Genes (frameshifted) :: 28 of 83 Pseudo Genes (incomplete) :: 62 of 83 Pseudo Genes (internal stop) :: 5 of 83 Pseudo Genes (multiple problems) :: 10 of 83 CRISPR Arrays :: 8 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308REFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3 Pseudo Genes (total) :: 83 CDSs (without protein) :: 83 Pseudo Genes (ambiguous residues) :: 0 of 83 Pseudo Genes (frameshifted) :: 28 of 83 Pseudo Genes (incomplete) :: 62 of 83 Pseudo Genes (internal stop) :: 5 of 83 Pseudo Genes (multiple problems) :: 10 of 83 CRISPR Arrays :: 8 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007REFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3 Pseudo Genes (total) :: 83 CDSs (without protein) :: 83 Pseudo Genes (ambiguous residues) :: 0 of 83 Pseudo Genes (frameshifted) :: 28 of 83 Pseudo Genes (incomplete) :: 62 of 83 Pseudo Genes (internal stop) :: 5 of 83 Pseudo Genes (multiple problems) :: 10 of 83 CRISPR Arrays :: 8 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMarkREFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3 Pseudo Genes (total) :: 83 CDSs (without protein) :: 83 Pseudo Genes (ambiguous residues) :: 0 of 83 Pseudo Genes (frameshifted) :: 28 of 83 Pseudo Genes (incomplete) :: 62 of 83 Pseudo Genes (internal stop) :: 5 of 83 Pseudo Genes (multiple problems) :: 10 of 83 CRISPR Arrays :: 8 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from PortugalREFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3 Pseudo Genes (total) :: 83 CDSs (without protein) :: 83 Pseudo Genes (ambiguous residues) :: 0 of 83 Pseudo Genes (frameshifted) :: 28 of 83 Pseudo Genes (incomplete) :: 62 of 83 Pseudo Genes (internal stop) :: 5 of 83 Pseudo Genes (multiple problems) :: 10 of 83 CRISPR Arrays :: 8 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: PortugalREFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3 Pseudo Genes (total) :: 83 CDSs (without protein) :: 83 Pseudo Genes (ambiguous residues) :: 0 of 83 Pseudo Genes (frameshifted) :: 28 of 83 Pseudo Genes (incomplete) :: 62 of 83 Pseudo Genes (internal stop) :: 5 of 83 Pseudo Genes (multiple problems) :: 10 of 83 CRISPR Arrays :: 8 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: AerobeREFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3 Pseudo Genes (total) :: 83 CDSs (without protein) :: 83 Pseudo Genes (ambiguous residues) :: 0 of 83 Pseudo Genes (frameshifted) :: 28 of 83 Pseudo Genes (incomplete) :: 62 of 83 Pseudo Genes (internal stop) :: 5 of 83 Pseudo Genes (multiple problems) :: 10 of 83 CRISPR Arrays :: 8 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shapedREFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3 Pseudo Genes (total) :: 83 CDSs (without protein) :: 83 Pseudo Genes (ambiguous residues) :: 0 of 83 Pseudo Genes (frameshifted) :: 28 of 83 Pseudo Genes (incomplete) :: 62 of 83 Pseudo Genes (internal stop) :: 5 of 83 Pseudo Genes (multiple problems) :: 10 of 83 CRISPR Arrays :: 8 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: NonmotileREFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3 Pseudo Genes (total) :: 83 CDSs (without protein) :: 83 Pseudo Genes (ambiguous residues) :: 0 of 83 Pseudo Genes (frameshifted) :: 28 of 83 Pseudo Genes (incomplete) :: 62 of 83 Pseudo Genes (internal stop) :: 5 of 83 Pseudo Genes (multiple problems) :: 10 of 83 CRISPR Arrays :: 8 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: ThermophileREFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3 Pseudo Genes (total) :: 83 CDSs (without protein) :: 83 Pseudo Genes (ambiguous residues) :: 0 of 83 Pseudo Genes (frameshifted) :: 28 of 83 Pseudo Genes (incomplete) :: 62 of 83 Pseudo Genes (internal stop) :: 5 of 83 Pseudo Genes (multiple problems) :: 10 of 83 CRISPR Arrays :: 8 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50CREFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3 Pseudo Genes (total) :: 83 CDSs (without protein) :: 83 Pseudo Genes (ambiguous residues) :: 0 of 83 Pseudo Genes (frameshifted) :: 28 of 83 Pseudo Genes (incomplete) :: 62 of 83 Pseudo Genes (internal stop) :: 5 of 83 Pseudo Genes (multiple problems) :: 10 of 83 CRISPR Arrays :: 8 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free livingREFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3 Pseudo Genes (total) :: 83 CDSs (without protein) :: 83 Pseudo Genes (ambiguous residues) :: 0 of 83 Pseudo Genes (frameshifted) :: 28 of 83 Pseudo Genes (incomplete) :: 62 of 83 Pseudo Genes (internal stop) :: 5 of 83 Pseudo Genes (multiple problems) :: 10 of 83 CRISPR Arrays :: 8 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: NoneREFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3 Pseudo Genes (total) :: 83 CDSs (without protein) :: 83 Pseudo Genes (ambiguous residues) :: 0 of 83 Pseudo Genes (frameshifted) :: 28 of 83 Pseudo Genes (incomplete) :: 62 of 83 Pseudo Genes (internal stop) :: 5 of 83 Pseudo Genes (multiple problems) :: 10 of 83 CRISPR Arrays :: 8 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot springREFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3 Pseudo Genes (total) :: 83 CDSs (without protein) :: 83 Pseudo Genes (ambiguous residues) :: 0 of 83 Pseudo Genes (frameshifted) :: 28 of 83 Pseudo Genes (incomplete) :: 62 of 83 Pseudo Genes (internal stop) :: 5 of 83 Pseudo Genes (multiple problems) :: 10 of 83 CRISPR Arrays :: 8 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END##REFSEQ INFORMATION: The reference sequence is identical to CP002042.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3 Pseudo Genes (total) :: 83 CDSs (without protein) :: 83 Pseudo Genes (ambiguous residues) :: 0 of 83 Pseudo Genes (frameshifted) :: 28 of 83 Pseudo Genes (incomplete) :: 62 of 83 Pseudo Genes (internal stop) :: 5 of 83 Pseudo Genes (multiple problems) :: 10 of 83 CRISPR Arrays :: 8 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## COMPLETENESS: full length. NC_014213.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP002043.1.REFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272REFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at theREFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ)REFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de)REFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)REFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANLREFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START##REFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946REFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542REFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308REFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007REFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMarkREFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from PortugalREFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: PortugalREFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: AerobeREFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shapedREFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: NonmotileREFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: ThermophileREFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50CREFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free livingREFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: NoneREFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot springREFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END##REFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12REFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12REFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7REFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755REFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699REFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616REFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616REFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56REFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47REFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3REFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3 Pseudo Genes (total) :: 83REFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3 Pseudo Genes (total) :: 83 CDSs (without protein) :: 83REFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3 Pseudo Genes (total) :: 83 CDSs (without protein) :: 83 Pseudo Genes (ambiguous residues) :: 0 of 83REFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3 Pseudo Genes (total) :: 83 CDSs (without protein) :: 83 Pseudo Genes (ambiguous residues) :: 0 of 83 Pseudo Genes (frameshifted) :: 28 of 83REFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3 Pseudo Genes (total) :: 83 CDSs (without protein) :: 83 Pseudo Genes (ambiguous residues) :: 0 of 83 Pseudo Genes (frameshifted) :: 28 of 83 Pseudo Genes (incomplete) :: 62 of 83REFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3 Pseudo Genes (total) :: 83 CDSs (without protein) :: 83 Pseudo Genes (ambiguous residues) :: 0 of 83 Pseudo Genes (frameshifted) :: 28 of 83 Pseudo Genes (incomplete) :: 62 of 83 Pseudo Genes (internal stop) :: 5 of 83REFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3 Pseudo Genes (total) :: 83 CDSs (without protein) :: 83 Pseudo Genes (ambiguous residues) :: 0 of 83 Pseudo Genes (frameshifted) :: 28 of 83 Pseudo Genes (incomplete) :: 62 of 83 Pseudo Genes (internal stop) :: 5 of 83 Pseudo Genes (multiple problems) :: 10 of 83REFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3 Pseudo Genes (total) :: 83 CDSs (without protein) :: 83 Pseudo Genes (ambiguous residues) :: 0 of 83 Pseudo Genes (frameshifted) :: 28 of 83 Pseudo Genes (incomplete) :: 62 of 83 Pseudo Genes (internal stop) :: 5 of 83 Pseudo Genes (multiple problems) :: 10 of 83 CRISPR Arrays :: 8REFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3 Pseudo Genes (total) :: 83 CDSs (without protein) :: 83 Pseudo Genes (ambiguous residues) :: 0 of 83 Pseudo Genes (frameshifted) :: 28 of 83 Pseudo Genes (incomplete) :: 62 of 83 Pseudo Genes (internal stop) :: 5 of 83 Pseudo Genes (multiple problems) :: 10 of 83 CRISPR Arrays :: 8 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP002043.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3 Pseudo Genes (total) :: 83 CDSs (without protein) :: 83 Pseudo Genes (ambiguous residues) :: 0 of 83 Pseudo Genes (frameshifted) :: 28 of 83 Pseudo Genes (incomplete) :: 62 of 83 Pseudo Genes (internal stop) :: 5 of 83 Pseudo Genes (multiple problems) :: 10 of 83 CRISPR Arrays :: 8 ##Genome-Annotation-Data-END## COMPLETENESS: full length. NC_014214.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP002044.1.REFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272REFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at theREFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ)REFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de)REFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)REFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANLREFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START##REFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946REFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542REFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308REFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007REFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMarkREFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from PortugalREFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: PortugalREFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: AerobeREFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shapedREFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: NonmotileREFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: ThermophileREFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50CREFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free livingREFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: NoneREFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot springREFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END##REFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12REFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12REFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7REFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755REFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699REFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616REFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616REFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56REFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47REFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3REFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3 Pseudo Genes (total) :: 83REFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3 Pseudo Genes (total) :: 83 CDSs (without protein) :: 83REFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3 Pseudo Genes (total) :: 83 CDSs (without protein) :: 83 Pseudo Genes (ambiguous residues) :: 0 of 83REFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3 Pseudo Genes (total) :: 83 CDSs (without protein) :: 83 Pseudo Genes (ambiguous residues) :: 0 of 83 Pseudo Genes (frameshifted) :: 28 of 83REFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3 Pseudo Genes (total) :: 83 CDSs (without protein) :: 83 Pseudo Genes (ambiguous residues) :: 0 of 83 Pseudo Genes (frameshifted) :: 28 of 83 Pseudo Genes (incomplete) :: 62 of 83REFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3 Pseudo Genes (total) :: 83 CDSs (without protein) :: 83 Pseudo Genes (ambiguous residues) :: 0 of 83 Pseudo Genes (frameshifted) :: 28 of 83 Pseudo Genes (incomplete) :: 62 of 83 Pseudo Genes (internal stop) :: 5 of 83REFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3 Pseudo Genes (total) :: 83 CDSs (without protein) :: 83 Pseudo Genes (ambiguous residues) :: 0 of 83 Pseudo Genes (frameshifted) :: 28 of 83 Pseudo Genes (incomplete) :: 62 of 83 Pseudo Genes (internal stop) :: 5 of 83 Pseudo Genes (multiple problems) :: 10 of 83REFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3 Pseudo Genes (total) :: 83 CDSs (without protein) :: 83 Pseudo Genes (ambiguous residues) :: 0 of 83 Pseudo Genes (frameshifted) :: 28 of 83 Pseudo Genes (incomplete) :: 62 of 83 Pseudo Genes (internal stop) :: 5 of 83 Pseudo Genes (multiple problems) :: 10 of 83 CRISPR Arrays :: 8REFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3 Pseudo Genes (total) :: 83 CDSs (without protein) :: 83 Pseudo Genes (ambiguous residues) :: 0 of 83 Pseudo Genes (frameshifted) :: 28 of 83 Pseudo Genes (incomplete) :: 62 of 83 Pseudo Genes (internal stop) :: 5 of 83 Pseudo Genes (multiple problems) :: 10 of 83 CRISPR Arrays :: 8 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP002044.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083272 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Meiothermus silvanus VI-R2, DSM 9946 Culture Collection ID :: DSM 9946, ATCC 700542 GOLD Stamp ID :: Gi02308 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Hot spring from Portugal Isolation Country :: Portugal Oxygen Requirement :: Aerobe Cell Shape :: Rod-shaped Motility :: Nonmotile Temperature Range :: Thermophile Temperature Optimum :: 50C Biotic Relationship :: Free living Diseases :: None Habitat :: Hot spring ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000092125.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:24:12 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,755 CDSs (total) :: 3,699 Genes (coding) :: 3,616 CDSs (with protein) :: 3,616 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 47 ncRNAs :: 3 Pseudo Genes (total) :: 83 CDSs (without protein) :: 83 Pseudo Genes (ambiguous residues) :: 0 of 83 Pseudo Genes (frameshifted) :: 28 of 83 Pseudo Genes (incomplete) :: 62 of 83 Pseudo Genes (internal stop) :: 5 of 83 Pseudo Genes (multiple problems) :: 10 of 83 CRISPR Arrays :: 8 ##Genome-Annotation-Data-END## COMPLETENESS: full length.