-- dump date 20240506_005327 -- class Genbank::Contig -- table contig_comment -- id comment NC_015945.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP002999.1.REFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465REFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at theREFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ)REFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de)REFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)REFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANLREFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaeaREFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258REFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: GermanyREFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1REFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1 ref_biomaterial :: DSM 13258REFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1 ref_biomaterial :: DSM 13258 biotic_relationship :: Free livingREFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1 ref_biomaterial :: DSM 13258 biotic_relationship :: Free living trophic_level :: HeterotrophREFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1 ref_biomaterial :: DSM 13258 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: FacultativeREFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1 ref_biomaterial :: DSM 13258 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Facultative isol_growth_condt :: 11760940REFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1 ref_biomaterial :: DSM 13258 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Facultative isol_growth_condt :: 11760940 sequencing_meth :: WGSREFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1 ref_biomaterial :: DSM 13258 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Facultative isol_growth_condt :: 11760940 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release)REFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1 ref_biomaterial :: DSM 13258 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Facultative isol_growth_condt :: 11760940 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1 ref_biomaterial :: DSM 13258 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Facultative isol_growth_condt :: 11760940 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05354REFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1 ref_biomaterial :: DSM 13258 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Facultative isol_growth_condt :: 11760940 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05354 Type Strain :: YesREFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1 ref_biomaterial :: DSM 13258 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Facultative isol_growth_condt :: 11760940 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05354 Type Strain :: Yes Funding Program :: DOE-GEBA 2009REFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1 ref_biomaterial :: DSM 13258 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Facultative isol_growth_condt :: 11760940 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05354 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMPREFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1 ref_biomaterial :: DSM 13258 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Facultative isol_growth_condt :: 11760940 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05354 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Seawater sediment suspension containingREFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1 ref_biomaterial :: DSM 13258 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Facultative isol_growth_condt :: 11760940 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05354 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Seawater sediment suspension containing hexadecane; Germany, North Sea coast.REFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1 ref_biomaterial :: DSM 13258 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Facultative isol_growth_condt :: 11760940 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05354 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Seawater sediment suspension containing hexadecane; Germany, North Sea coast. Isolation Comments :: isolated by U. MaschmannREFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1 ref_biomaterial :: DSM 13258 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Facultative isol_growth_condt :: 11760940 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05354 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Seawater sediment suspension containing hexadecane; Germany, North Sea coast. Isolation Comments :: isolated by U. Maschmann Temperature Range :: MesophileREFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1 ref_biomaterial :: DSM 13258 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Facultative isol_growth_condt :: 11760940 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05354 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Seawater sediment suspension containing hexadecane; Germany, North Sea coast. Isolation Comments :: isolated by U. Maschmann Temperature Range :: Mesophile Temperature Optimum :: 30CREFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1 ref_biomaterial :: DSM 13258 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Facultative isol_growth_condt :: 11760940 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05354 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Seawater sediment suspension containing hexadecane; Germany, North Sea coast. Isolation Comments :: isolated by U. Maschmann Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram-REFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1 ref_biomaterial :: DSM 13258 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Facultative isol_growth_condt :: 11760940 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05354 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Seawater sediment suspension containing hexadecane; Germany, North Sea coast. Isolation Comments :: isolated by U. Maschmann Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- ##MIGS-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1 ref_biomaterial :: DSM 13258 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Facultative isol_growth_condt :: 11760940 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05354 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Seawater sediment suspension containing hexadecane; Germany, North Sea coast. Isolation Comments :: isolated by U. Maschmann Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1 ref_biomaterial :: DSM 13258 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Facultative isol_growth_condt :: 11760940 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05354 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Seawater sediment suspension containing hexadecane; Germany, North Sea coast. Isolation Comments :: isolated by U. Maschmann Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1 ref_biomaterial :: DSM 13258 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Facultative isol_growth_condt :: 11760940 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05354 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Seawater sediment suspension containing hexadecane; Germany, North Sea coast. Isolation Comments :: isolated by U. Maschmann Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1 ref_biomaterial :: DSM 13258 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Facultative isol_growth_condt :: 11760940 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05354 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Seawater sediment suspension containing hexadecane; Germany, North Sea coast. Isolation Comments :: isolated by U. Maschmann Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3REFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1 ref_biomaterial :: DSM 13258 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Facultative isol_growth_condt :: 11760940 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05354 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Seawater sediment suspension containing hexadecane; Germany, North Sea coast. Isolation Comments :: isolated by U. Maschmann Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30xREFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1 ref_biomaterial :: DSM 13258 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Facultative isol_growth_condt :: 11760940 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05354 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Seawater sediment suspension containing hexadecane; Germany, North Sea coast. Isolation Comments :: isolated by U. Maschmann Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/IlluminaREFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1 ref_biomaterial :: DSM 13258 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Facultative isol_growth_condt :: 11760940 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05354 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Seawater sediment suspension containing hexadecane; Germany, North Sea coast. Isolation Comments :: isolated by U. Maschmann Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1 ref_biomaterial :: DSM 13258 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Facultative isol_growth_condt :: 11760940 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05354 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Seawater sediment suspension containing hexadecane; Germany, North Sea coast. Isolation Comments :: isolated by U. Maschmann Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1 ref_biomaterial :: DSM 13258 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Facultative isol_growth_condt :: 11760940 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05354 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Seawater sediment suspension containing hexadecane; Germany, North Sea coast. Isolation Comments :: isolated by U. Maschmann Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1 ref_biomaterial :: DSM 13258 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Facultative isol_growth_condt :: 11760940 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05354 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Seawater sediment suspension containing hexadecane; Germany, North Sea coast. Isolation Comments :: isolated by U. Maschmann Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 10:15:35REFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1 ref_biomaterial :: DSM 13258 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Facultative isol_growth_condt :: 11760940 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05354 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Seawater sediment suspension containing hexadecane; Germany, North Sea coast. Isolation Comments :: isolated by U. Maschmann Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 10:15:35 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1 ref_biomaterial :: DSM 13258 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Facultative isol_growth_condt :: 11760940 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05354 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Seawater sediment suspension containing hexadecane; Germany, North Sea coast. Isolation Comments :: isolated by U. Maschmann Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 10:15:35 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1 ref_biomaterial :: DSM 13258 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Facultative isol_growth_condt :: 11760940 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05354 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Seawater sediment suspension containing hexadecane; Germany, North Sea coast. Isolation Comments :: isolated by U. Maschmann Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 10:15:35 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1 ref_biomaterial :: DSM 13258 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Facultative isol_growth_condt :: 11760940 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05354 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Seawater sediment suspension containing hexadecane; Germany, North Sea coast. Isolation Comments :: isolated by U. Maschmann Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 10:15:35 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1 ref_biomaterial :: DSM 13258 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Facultative isol_growth_condt :: 11760940 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05354 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Seawater sediment suspension containing hexadecane; Germany, North Sea coast. Isolation Comments :: isolated by U. Maschmann Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 10:15:35 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1 ref_biomaterial :: DSM 13258 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Facultative isol_growth_condt :: 11760940 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05354 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Seawater sediment suspension containing hexadecane; Germany, North Sea coast. Isolation Comments :: isolated by U. Maschmann Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 10:15:35 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1 ref_biomaterial :: DSM 13258 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Facultative isol_growth_condt :: 11760940 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05354 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Seawater sediment suspension containing hexadecane; Germany, North Sea coast. Isolation Comments :: isolated by U. Maschmann Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 10:15:35 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,430REFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1 ref_biomaterial :: DSM 13258 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Facultative isol_growth_condt :: 11760940 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05354 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Seawater sediment suspension containing hexadecane; Germany, North Sea coast. Isolation Comments :: isolated by U. Maschmann Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 10:15:35 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,430 CDSs (total) :: 3,382REFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1 ref_biomaterial :: DSM 13258 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Facultative isol_growth_condt :: 11760940 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05354 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Seawater sediment suspension containing hexadecane; Germany, North Sea coast. Isolation Comments :: isolated by U. Maschmann Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 10:15:35 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,430 CDSs (total) :: 3,382 Genes (coding) :: 3,368REFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1 ref_biomaterial :: DSM 13258 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Facultative isol_growth_condt :: 11760940 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05354 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Seawater sediment suspension containing hexadecane; Germany, North Sea coast. Isolation Comments :: isolated by U. Maschmann Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 10:15:35 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,430 CDSs (total) :: 3,382 Genes (coding) :: 3,368 CDSs (with protein) :: 3,368REFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1 ref_biomaterial :: DSM 13258 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Facultative isol_growth_condt :: 11760940 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05354 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Seawater sediment suspension containing hexadecane; Germany, North Sea coast. Isolation Comments :: isolated by U. Maschmann Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 10:15:35 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,430 CDSs (total) :: 3,382 Genes (coding) :: 3,368 CDSs (with protein) :: 3,368 Genes (RNA) :: 48REFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1 ref_biomaterial :: DSM 13258 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Facultative isol_growth_condt :: 11760940 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05354 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Seawater sediment suspension containing hexadecane; Germany, North Sea coast. Isolation Comments :: isolated by U. Maschmann Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 10:15:35 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,430 CDSs (total) :: 3,382 Genes (coding) :: 3,368 CDSs (with protein) :: 3,368 Genes (RNA) :: 48 rRNAs :: 2, 2, 2 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1 ref_biomaterial :: DSM 13258 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Facultative isol_growth_condt :: 11760940 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05354 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Seawater sediment suspension containing hexadecane; Germany, North Sea coast. Isolation Comments :: isolated by U. Maschmann Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 10:15:35 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,430 CDSs (total) :: 3,382 Genes (coding) :: 3,368 CDSs (with protein) :: 3,368 Genes (RNA) :: 48 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1 ref_biomaterial :: DSM 13258 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Facultative isol_growth_condt :: 11760940 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05354 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Seawater sediment suspension containing hexadecane; Germany, North Sea coast. Isolation Comments :: isolated by U. Maschmann Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 10:15:35 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,430 CDSs (total) :: 3,382 Genes (coding) :: 3,368 CDSs (with protein) :: 3,368 Genes (RNA) :: 48 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 38REFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1 ref_biomaterial :: DSM 13258 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Facultative isol_growth_condt :: 11760940 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05354 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Seawater sediment suspension containing hexadecane; Germany, North Sea coast. Isolation Comments :: isolated by U. Maschmann Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 10:15:35 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,430 CDSs (total) :: 3,382 Genes (coding) :: 3,368 CDSs (with protein) :: 3,368 Genes (RNA) :: 48 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 38 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1 ref_biomaterial :: DSM 13258 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Facultative isol_growth_condt :: 11760940 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05354 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Seawater sediment suspension containing hexadecane; Germany, North Sea coast. Isolation Comments :: isolated by U. Maschmann Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 10:15:35 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,430 CDSs (total) :: 3,382 Genes (coding) :: 3,368 CDSs (with protein) :: 3,368 Genes (RNA) :: 48 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 38 ncRNAs :: 4 Pseudo Genes (total) :: 14REFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1 ref_biomaterial :: DSM 13258 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Facultative isol_growth_condt :: 11760940 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05354 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Seawater sediment suspension containing hexadecane; Germany, North Sea coast. Isolation Comments :: isolated by U. Maschmann Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 10:15:35 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,430 CDSs (total) :: 3,382 Genes (coding) :: 3,368 CDSs (with protein) :: 3,368 Genes (RNA) :: 48 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 38 ncRNAs :: 4 Pseudo Genes (total) :: 14 CDSs (without protein) :: 14REFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1 ref_biomaterial :: DSM 13258 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Facultative isol_growth_condt :: 11760940 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05354 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Seawater sediment suspension containing hexadecane; Germany, North Sea coast. Isolation Comments :: isolated by U. Maschmann Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 10:15:35 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,430 CDSs (total) :: 3,382 Genes (coding) :: 3,368 CDSs (with protein) :: 3,368 Genes (RNA) :: 48 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 38 ncRNAs :: 4 Pseudo Genes (total) :: 14 CDSs (without protein) :: 14 Pseudo Genes (ambiguous residues) :: 0 of 14REFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1 ref_biomaterial :: DSM 13258 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Facultative isol_growth_condt :: 11760940 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05354 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Seawater sediment suspension containing hexadecane; Germany, North Sea coast. Isolation Comments :: isolated by U. Maschmann Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 10:15:35 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,430 CDSs (total) :: 3,382 Genes (coding) :: 3,368 CDSs (with protein) :: 3,368 Genes (RNA) :: 48 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 38 ncRNAs :: 4 Pseudo Genes (total) :: 14 CDSs (without protein) :: 14 Pseudo Genes (ambiguous residues) :: 0 of 14 Pseudo Genes (frameshifted) :: 6 of 14REFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1 ref_biomaterial :: DSM 13258 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Facultative isol_growth_condt :: 11760940 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05354 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Seawater sediment suspension containing hexadecane; Germany, North Sea coast. Isolation Comments :: isolated by U. Maschmann Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 10:15:35 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,430 CDSs (total) :: 3,382 Genes (coding) :: 3,368 CDSs (with protein) :: 3,368 Genes (RNA) :: 48 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 38 ncRNAs :: 4 Pseudo Genes (total) :: 14 CDSs (without protein) :: 14 Pseudo Genes (ambiguous residues) :: 0 of 14 Pseudo Genes (frameshifted) :: 6 of 14 Pseudo Genes (incomplete) :: 9 of 14REFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1 ref_biomaterial :: DSM 13258 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Facultative isol_growth_condt :: 11760940 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05354 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Seawater sediment suspension containing hexadecane; Germany, North Sea coast. Isolation Comments :: isolated by U. Maschmann Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 10:15:35 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,430 CDSs (total) :: 3,382 Genes (coding) :: 3,368 CDSs (with protein) :: 3,368 Genes (RNA) :: 48 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 38 ncRNAs :: 4 Pseudo Genes (total) :: 14 CDSs (without protein) :: 14 Pseudo Genes (ambiguous residues) :: 0 of 14 Pseudo Genes (frameshifted) :: 6 of 14 Pseudo Genes (incomplete) :: 9 of 14 Pseudo Genes (internal stop) :: 7 of 14REFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1 ref_biomaterial :: DSM 13258 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Facultative isol_growth_condt :: 11760940 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05354 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Seawater sediment suspension containing hexadecane; Germany, North Sea coast. Isolation Comments :: isolated by U. Maschmann Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 10:15:35 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,430 CDSs (total) :: 3,382 Genes (coding) :: 3,368 CDSs (with protein) :: 3,368 Genes (RNA) :: 48 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 38 ncRNAs :: 4 Pseudo Genes (total) :: 14 CDSs (without protein) :: 14 Pseudo Genes (ambiguous residues) :: 0 of 14 Pseudo Genes (frameshifted) :: 6 of 14 Pseudo Genes (incomplete) :: 9 of 14 Pseudo Genes (internal stop) :: 7 of 14 Pseudo Genes (multiple problems) :: 7 of 14REFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1 ref_biomaterial :: DSM 13258 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Facultative isol_growth_condt :: 11760940 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05354 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Seawater sediment suspension containing hexadecane; Germany, North Sea coast. Isolation Comments :: isolated by U. Maschmann Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 10:15:35 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,430 CDSs (total) :: 3,382 Genes (coding) :: 3,368 CDSs (with protein) :: 3,368 Genes (RNA) :: 48 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 38 ncRNAs :: 4 Pseudo Genes (total) :: 14 CDSs (without protein) :: 14 Pseudo Genes (ambiguous residues) :: 0 of 14 Pseudo Genes (frameshifted) :: 6 of 14 Pseudo Genes (incomplete) :: 9 of 14 Pseudo Genes (internal stop) :: 7 of 14 Pseudo Genes (multiple problems) :: 7 of 14 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP002999.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4089465 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Muricauda ruestringensis B1, DSM 13258 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Germany environment :: Missing num_replicons :: 1 ref_biomaterial :: DSM 13258 biotic_relationship :: Free living trophic_level :: Heterotroph rel_to_oxygen :: Facultative isol_growth_condt :: 11760940 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05354 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal 1.4, GenePRIMP Isolation Site :: Seawater sediment suspension containing hexadecane; Germany, North Sea coast. Isolation Comments :: isolated by U. Maschmann Temperature Range :: Mesophile Temperature Optimum :: 30C Gram Staining :: Gram- ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/03/2024 10:15:35 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,430 CDSs (total) :: 3,382 Genes (coding) :: 3,368 CDSs (with protein) :: 3,368 Genes (RNA) :: 48 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 38 ncRNAs :: 4 Pseudo Genes (total) :: 14 CDSs (without protein) :: 14 Pseudo Genes (ambiguous residues) :: 0 of 14 Pseudo Genes (frameshifted) :: 6 of 14 Pseudo Genes (incomplete) :: 9 of 14 Pseudo Genes (internal stop) :: 7 of 14 Pseudo Genes (multiple problems) :: 7 of 14 ##Genome-Annotation-Data-END## COMPLETENESS: full length.