-- dump date 20140618_204507 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 224324000001 SEQ_END SEQ_END NC_000918.1 1551335 1551335 DR NC_000918.1; contig end 1551335..1551335 Aquifex aeolicus VF5 224324000002 SEQ_END SEQ_END NC_001880.1 39456 39456 DR NC_001880.1; contig end 39456..39456 Aquifex aeolicus VF5 NP_212986.1 CDS fusA NC_000918.1 1 2100 D EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 1..2100 Aquifex aeolicus VF5 1192533 NP_212987.1 CDS tufA1 NC_000918.1 2117 3334 D EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 2117..3334 Aquifex aeolicus VF5 1192534 NP_212988.1 CDS rpsJ NC_000918.1 3346 3660 D NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 3346..3660 Aquifex aeolicus VF5 1192535 NP_212989.1 CDS rplC NC_000918.1 3665 4390 D binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 3665..4390 Aquifex aeolicus VF5 1192536 NP_212990.1 CDS rplD NC_000918.1 4387 4986 D L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 4387..4986 Aquifex aeolicus VF5 1192537 NP_212991.1 CDS rplW NC_000918.1 4990 5301 D binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 4990..5301 Aquifex aeolicus VF5 1192538 NP_212992.1 CDS rplB NC_000918.1 5313 6227 D one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 5313..6227 Aquifex aeolicus VF5 1192539 NP_212993.1 CDS rpsS NC_000918.1 6340 6900 D protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 6340..6900 Aquifex aeolicus VF5 1192540 NP_212994.1 CDS rplV NC_000918.1 7018 7314 D 50S ribosomal protein L22 7018..7314 Aquifex aeolicus VF5 1192541 NP_212995.1 CDS rpsC NC_000918.1 7317 7955 D 30S ribosomal protein S3 7317..7955 Aquifex aeolicus VF5 1192634 NP_212996.1 CDS rplP NC_000918.1 8017 8445 D located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 8017..8445 Aquifex aeolicus VF5 1192635 NP_212997.1 CDS rpmC NC_000918.1 8457 8678 D 50S ribosomal protein L29 8457..8678 Aquifex aeolicus VF5 1193996 NP_212998.1 CDS rpsQ NC_000918.1 8678 9001 D primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 8678..9001 Aquifex aeolicus VF5 1192636 NP_212999.1 CDS aroD NC_000918.1 9001 9660 D 3-dehydroquinate dehydratase 9001..9660 Aquifex aeolicus VF5 1192637 NP_213000.1 CDS aq_022 NC_000918.1 9657 10157 R hypothetical protein complement(9657..10157) Aquifex aeolicus VF5 1192638 NP_213001.1 CDS argD NC_000918.1 10169 11299 R catalyzes the formation of N-acetyl-l-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine aminotransferase complement(10169..11299) Aquifex aeolicus VF5 1192639 NP_213002.1 CDS nsd NC_000918.1 11296 12609 R nucleotide sugar dehydrogenase complement(11296..12609) Aquifex aeolicus VF5 1192640 NP_213003.1 CDS rodA NC_000918.1 12887 14005 R rod shape determining protein RodA complement(12887..14005) Aquifex aeolicus VF5 1192641 NP_213004.1 CDS thiS NC_000918.1 13974 14183 R thiamine biosynthesis sulfur transfer protein complement(13974..14183) Aquifex aeolicus VF5 1194005 NP_213005.1 CDS aq_026 NC_000918.1 14174 14656 R hypothetical protein complement(14174..14656) Aquifex aeolicus VF5 1192642 NP_213006.1 CDS aq_027 NC_000918.1 14676 16454 R hypothetical protein complement(14676..16454) Aquifex aeolicus VF5 1192643 NP_213007.1 CDS aq_028 NC_000918.1 16527 17006 R hypothetical protein complement(16527..17006) Aquifex aeolicus VF5 1192644 NP_213008.1 CDS moeA1 NC_000918.1 17053 18261 D molybdenum cofactor biosynthesis protein A 17053..18261 Aquifex aeolicus VF5 1192645 NP_213009.1 CDS trnS NC_000918.1 18275 19615 D transporter 18275..19615 Aquifex aeolicus VF5 1192646 NP_213010.1 CDS aq_032 NC_000918.1 19620 21062 D hypothetical protein 19620..21062 Aquifex aeolicus VF5 1192647 NP_213011.1 CDS aq_035 NC_000918.1 21051 22346 R hypothetical protein complement(21051..22346) Aquifex aeolicus VF5 1192648 NP_213012.1 CDS aq_036 NC_000918.1 22379 22885 D hypothetical protein 22379..22885 Aquifex aeolicus VF5 1192649 NP_213013.1 CDS aq_037 NC_000918.1 22998 23525 D hypothetical protein 22998..23525 Aquifex aeolicus VF5 1192650 NP_213014.1 CDS hibD NC_000918.1 23541 24407 D 3-hydroxyisobutyrate dehydrogenase 23541..24407 Aquifex aeolicus VF5 1192651 NP_213015.1 CDS hisB NC_000918.1 24404 24982 R catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase complement(24404..24982) Aquifex aeolicus VF5 1192652 NP_213016.1 CDS aq_040 NC_000918.1 24997 26217 R hypothetical protein complement(24997..26217) Aquifex aeolicus VF5 1192653 NP_213017.1 CDS aq_041 NC_000918.1 26274 26585 R hypothetical protein complement(26274..26585) Aquifex aeolicus VF5 1192654 NP_213018.1 CDS cyc NC_000918.1 26618 27340 R cytochrome C complement(26618..27340) Aquifex aeolicus VF5 1192655 NP_213019.1 CDS petB NC_000918.1 27337 28566 R cytochrome b complement(27337..28566) Aquifex aeolicus VF5 1192656 NP_213020.1 CDS petA NC_000918.1 28580 29125 R Rieske-I iron sulfur protein complement(28580..29125) Aquifex aeolicus VF5 1192657 NP_213021.1 CDS pyrD NC_000918.1 29251 30171 D catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway, using a flavin nucleotide as an essential cofactor; subclass 1B is a heterotetramer consisting of two PyrDB subunits, similar to the PyrDA subunits and two PyrK subunits; dihydroorotate dehydrogenase 1B 29251..30171 Aquifex aeolicus VF5 1192658 NP_213022.1 CDS phhB NC_000918.1 30179 30478 D pterin-4a-carbinolamine dehydratase 30179..30478 Aquifex aeolicus VF5 1192659 NP_213023.1 CDS aq_050 NC_000918.1 30475 33036 D hypothetical protein 30475..33036 Aquifex aeolicus VF5 1192660 NP_213024.1 CDS ubiA NC_000918.1 33033 33887 R 4-hydroxybenzoate octaprenyltransferase complement(33033..33887) Aquifex aeolicus VF5 1192661 NP_213025.1 CDS mraY NC_000918.1 33884 34963 R First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase complement(33884..34963) Aquifex aeolicus VF5 1192662 NP_213026.1 CDS aq_054 NC_000918.1 34963 35580 R hypothetical protein complement(34963..35580) Aquifex aeolicus VF5 1192663 NP_213027.1 CDS hemX1 NC_000918.1 35564 36322 D cytochrome C biogenesis protein 35564..36322 Aquifex aeolicus VF5 1192664 NP_213028.1 CDS fabZ NC_000918.1 36306 36758 R in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase complement(36306..36758) Aquifex aeolicus VF5 1192481 NP_213029.1 CDS sfsA NC_000918.1 36782 37426 D sugar fermentation stimulation protein 36782..37426 Aquifex aeolicus VF5 1192482 NP_213030.1 CDS aq_058 NC_000918.1 37923 38273 D hypothetical protein 37923..38273 Aquifex aeolicus VF5 1192483 NP_213032.1 CDS mogA NC_000918.1 38923 39459 R forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MogA complement(38923..39459) Aquifex aeolicus VF5 1192485 NP_213033.1 CDS speE NC_000918.1 39496 40338 D spermidine synthase 39496..40338 Aquifex aeolicus VF5 1192486 NP_213034.1 CDS rpsF NC_000918.1 40413 40745 D binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 40413..40745 Aquifex aeolicus VF5 1192487 NP_213035.1 CDS ssb NC_000918.1 40735 41178 D single stranded DNA-binding protein 40735..41178 Aquifex aeolicus VF5 1192488 NP_213036.1 CDS rpsR NC_000918.1 41197 41415 D binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 41197..41415 Aquifex aeolicus VF5 1192489 NP_213037.1 CDS aq_064b NC_000918.1 41470 41649 D hypothetical protein 41470..41649 Aquifex aeolicus VF5 1192490 NP_213038.1 CDS aq_064c NC_000918.1 41650 41883 D hypothetical protein 41650..41883 Aquifex aeolicus VF5 1192491 NP_213039.1 CDS aq_065 NC_000918.1 41880 42773 R hypothetical protein complement(41880..42773) Aquifex aeolicus VF5 1192492 NP_213040.1 CDS aq_066 NC_000918.1 42795 43763 D hypothetical protein 42795..43763 Aquifex aeolicus VF5 1192493 NP_213041.1 CDS dmsB2 NC_000918.1 43756 44268 R dimethylsulfoxide reductase subunit B complement(43756..44268) Aquifex aeolicus VF5 1192494 NP_213042.1 CDS rplQ NC_000918.1 44501 44857 R is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 complement(44501..44857) Aquifex aeolicus VF5 1192495 NP_213043.1 CDS rpoA NC_000918.1 44863 45816 R catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha complement(44863..45816) Aquifex aeolicus VF5 1192496 NP_213044.1 CDS rpsD NC_000918.1 45829 46464 R primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 complement(45829..46464) Aquifex aeolicus VF5 1192497 NP_213045.1 CDS rpsK NC_000918.1 46465 46842 R located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 complement(46465..46842) Aquifex aeolicus VF5 1192498 NP_213046.1 CDS rpsM NC_000918.1 46858 47238 R located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 complement(46858..47238) Aquifex aeolicus VF5 1192499 NP_213047.1 CDS rpmJ NC_000918.1 47216 47365 R 50S ribosomal protein L36 complement(47216..47365) Aquifex aeolicus VF5 1192500 NP_213048.1 CDS infA NC_000918.1 47426 47668 R stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 complement(47426..47668) Aquifex aeolicus VF5 1192501 NP_213049.1 CDS map NC_000918.1 47671 48447 R methionyl aminopeptidase complement(47671..48447) Aquifex aeolicus VF5 1192502 NP_213050.1 CDS kad NC_000918.1 48437 49057 R adenylate kinase complement(48437..49057) Aquifex aeolicus VF5 1192503 NP_213051.1 CDS secY NC_000918.1 49062 50351 R forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY complement(49062..50351) Aquifex aeolicus VF5 1192504 NP_213052.1 CDS rpmB NC_000918.1 50396 50605 D 50S ribosomal protein L28 50396..50605 Aquifex aeolicus VF5 1192505 NP_213053.1 CDS aroC NC_000918.1 50605 51801 D catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 50605..51801 Aquifex aeolicus VF5 1192506 NP_213054.1 CDS aq_082 NC_000918.1 51803 52405 D hypothetical protein 51803..52405 Aquifex aeolicus VF5 1192507 NP_213055.1 CDS aq_083 NC_000918.1 52390 53406 R hypothetical protein complement(52390..53406) Aquifex aeolicus VF5 1192508 NP_213056.1 CDS kdsA NC_000918.1 53671 54474 D catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 53671..54474 Aquifex aeolicus VF5 1192509 NP_213057.1 CDS modC NC_000918.1 54471 55133 D molybdenum ABC transporter permease 54471..55133 Aquifex aeolicus VF5 1192510 NP_213058.1 CDS aq_087 NC_000918.1 55256 55597 D hypothetical protein 55256..55597 Aquifex aeolicus VF5 1192511 NP_213059.1 CDS aq_088 NC_000918.1 55612 55947 D hypothetical protein 55612..55947 Aquifex aeolicus VF5 1192512 NP_213060.1 CDS aq_090 NC_000918.1 55975 56379 D hypothetical protein 55975..56379 Aquifex aeolicus VF5 1192513 NP_213061.1 CDS aq_091m NC_000918.1 56372 57964 D ATPase AAA 56372..57964 Aquifex aeolicus VF5 1193997 NP_213062.1 CDS nrdA NC_000918.1 57961 60366 R ribonucleotide reductase subunit alpha complement(57961..60366) Aquifex aeolicus VF5 1192514 NP_213063.1 CDS aq_097 NC_000918.1 60452 61675 R hypothetical protein complement(60452..61675) Aquifex aeolicus VF5 1192515 NP_213064.1 CDS secG NC_000918.1 61696 61998 D protein export membrane protein SecG 61696..61998 Aquifex aeolicus VF5 1192516 NP_213065.1 CDS hemK NC_000918.1 61934 62779 D protoporphyrinogen oxidase 61934..62779 Aquifex aeolicus VF5 1192517 NP_213066.1 CDS hly3 NC_000918.1 62770 64020 D hemolysin 62770..64020 Aquifex aeolicus VF5 1192518 NP_213067.1 CDS aq_103 NC_000918.1 63986 64726 R hypothetical protein complement(63986..64726) Aquifex aeolicus VF5 1192519 NP_213068.1 CDS aq_104 NC_000918.1 64729 65841 R hypothetical protein complement(64729..65841) Aquifex aeolicus VF5 1192520 NP_213070.1 CDS rbfA NC_000918.1 65828 66151 R ribosome-binding factor A complement(65828..66151) Aquifex aeolicus VF5 1193998 NP_213072.1 CDS hfq NC_000918.1 66900 67142 R host factor I complement(66900..67142) Aquifex aeolicus VF5 1192523 NP_213073.1 CDS glnB NC_000918.1 67339 67677 D nitrogen regulatory PII protein 67339..67677 Aquifex aeolicus VF5 1192524 NP_213074.1 CDS glnA NC_000918.1 67698 69107 D glutamine synthetase 67698..69107 Aquifex aeolicus VF5 1192525 NP_213075.1 CDS amtB NC_000918.1 69169 70440 D ammonium transporter 69169..70440 Aquifex aeolicus VF5 1192526 NP_213076.1 CDS aq_113 NC_000918.1 70454 71500 D hypothetical protein 70454..71500 Aquifex aeolicus VF5 1192527 NP_213077.1 CDS aq_114 NC_000918.1 71803 72243 R hypothetical protein complement(71803..72243) Aquifex aeolicus VF5 1192528 NP_213078.1 CDS aq_116 NC_000918.1 72560 74122 R hypothetical protein complement(72560..74122) Aquifex aeolicus VF5 1192529 NP_213079.1 CDS pgk NC_000918.1 74123 75316 R Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase complement(74123..75316) Aquifex aeolicus VF5 1192530 NP_213080.1 CDS talC NC_000918.1 75328 75981 R similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity; translaldolase complement(75328..75981) Aquifex aeolicus VF5 1192531 NP_213081.1 CDS aq_121 NC_000918.1 76010 77038 R hypothetical protein complement(76010..77038) Aquifex aeolicus VF5 1192532 NP_213082.1 CDS hisS NC_000918.1 77035 78246 R catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase complement(77035..78246) Aquifex aeolicus VF5 1192665 NP_213083.1 CDS rpsP NC_000918.1 78328 78666 D 30S ribosomal protein S16 78328..78666 Aquifex aeolicus VF5 1192666 NP_213084.1 CDS aq_124a NC_000918.1 78663 78902 D hypothetical protein 78663..78902 Aquifex aeolicus VF5 1192667 NP_213085.1 CDS aq_125 NC_000918.1 78902 79300 D hypothetical protein 78902..79300 Aquifex aeolicus VF5 1192668 NP_213086.1 CDS aq_126 NC_000918.1 79305 79748 D hypothetical protein 79305..79748 Aquifex aeolicus VF5 1192669 NP_213087.1 CDS aq_127 NC_000918.1 79748 80566 D hypothetical protein 79748..80566 Aquifex aeolicus VF5 1192670 NP_213088.1 CDS aq_128 NC_000918.1 80390 81808 R hypothetical protein complement(80390..81808) Aquifex aeolicus VF5 1192671 NP_213089.1 CDS ribH NC_000918.1 81823 82287 D RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 81823..82287 Aquifex aeolicus VF5 1192672 NP_213090.1 CDS nusB NC_000918.1 82284 82730 D Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 82284..82730 Aquifex aeolicus VF5 1192673 NP_213091.1 CDS aq_134 NC_000918.1 82932 83387 D hypothetical protein 82932..83387 Aquifex aeolicus VF5 1192674 NP_213092.1 CDS nueM NC_000918.1 83384 84331 D NADH dehydrogenase (ubiquinone) 83384..84331 Aquifex aeolicus VF5 1192675 NP_213093.1 CDS cpx NC_000918.1 84354 85421 D cytochrome C peroxidase 84354..85421 Aquifex aeolicus VF5 1192676 NP_213094.1 CDS ribD1 NC_000918.1 85418 86488 R riboflavin specific deaminase complement(85418..86488) Aquifex aeolicus VF5 1192677 NP_213095.1 CDS ribF NC_000918.1 86485 87429 R riboflavin kinase complement(86485..87429) Aquifex aeolicus VF5 1192678 NP_213096.1 CDS pkcI NC_000918.1 87436 87801 R protein kinase C inhibitor complement(87436..87801) Aquifex aeolicus VF5 1192679 NP_213097.1 CDS aq_142 NC_000918.1 88156 88596 D hypothetical protein 88156..88596 Aquifex aeolicus VF5 1192680 NP_213098.1 CDS rfaC2 NC_000918.1 88593 89546 D ADP-heptose--LPS heptosyltransferase 88593..89546 Aquifex aeolicus VF5 1192681 NP_213099.1 CDS cobW NC_000918.1 89543 90421 D cobalamin synthesis related protein CobW 89543..90421 Aquifex aeolicus VF5 1192682 NP_213100.1 CDS deoC NC_000918.1 90418 91077 D catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase 90418..91077 Aquifex aeolicus VF5 1192683 NP_213101.1 CDS gltA NC_000918.1 91085 91864 D Catalyzes the first step in the citric acid cycle. Oxaloacetate and acetyl-CoA bind to citrate synthase, which then catalyzes the reaction which joins the two compounds together; citrate synthase 91085..91864 Aquifex aeolicus VF5 1192684 NP_213102.1 CDS tlpA NC_000918.1 91861 92301 D thiol disulfide interchange protein 91861..92301 Aquifex aeolicus VF5 1192685 NP_213103.1 CDS ctaA NC_000918.1 92881 93771 D heme O oxygenase 92881..93771 Aquifex aeolicus VF5 1192686 NP_213104.1 CDS ctaB NC_000918.1 93768 94646 D cytochrome C oxidase assembly factor 93768..94646 Aquifex aeolicus VF5 1192687 NP_213105.1 CDS aq_155 NC_000918.1 94648 95808 D hypothetical protein 94648..95808 Aquifex aeolicus VF5 1192688 NP_213106.1 CDS aq_156 NC_000918.1 96008 96406 D hypothetical protein 96008..96406 Aquifex aeolicus VF5 1192689 NP_213107.1 CDS aq_157 NC_000918.1 96408 96896 D hypothetical protein 96408..96896 Aquifex aeolicus VF5 1192690 NP_213108.1 CDS apfA NC_000918.1 96893 97297 D AP4A hydrolase 96893..97297 Aquifex aeolicus VF5 1192691 NP_213110.1 CDS folK NC_000918.1 98536 99018 D folate biosynthesis 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 98536..99018 Aquifex aeolicus VF5 1192693 NP_213111.1 CDS ntrC4 NC_000918.1 99015 100343 D NtrC family transcriptional regulator 99015..100343 Aquifex aeolicus VF5 1192694 NP_213112.1 CDS aq_165 NC_000918.1 100330 101019 R hypothetical protein complement(100330..101019) Aquifex aeolicus VF5 1192695 NP_213113.1 CDS proC NC_000918.1 101014 101811 D pyrroline carboxylate reductase 101014..101811 Aquifex aeolicus VF5 1192696 NP_213114.1 CDS aq_167 NC_000918.1 101772 102392 D hypothetical protein 101772..102392 Aquifex aeolicus VF5 1192697 NP_213117.1 CDS bioA NC_000918.1 103299 104660 R DAPA aminotransferase complement(103299..104660) Aquifex aeolicus VF5 1192700 NP_213118.1 CDS aq_171 NC_000918.1 104858 105598 D hypothetical protein 104858..105598 Aquifex aeolicus VF5 1192701 NP_213119.1 CDS mutY2 NC_000918.1 105912 106574 R endonuclease III complement(105912..106574) Aquifex aeolicus VF5 1192702 NP_213120.1 CDS aq_173 NC_000918.1 106547 107290 R hypothetical protein complement(106547..107290) Aquifex aeolicus VF5 1192703 NP_213121.1 CDS aq_175 NC_000918.1 107287 108795 R hypothetical protein complement(107287..108795) Aquifex aeolicus VF5 1192704 NP_213122.1 CDS aq_175a NC_000918.1 108792 108998 R hypothetical protein complement(108792..108998) Aquifex aeolicus VF5 1194000 NP_213123.1 CDS rpmH NC_000918.1 109002 109145 R in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 complement(109002..109145) Aquifex aeolicus VF5 1192705 NP_213124.1 CDS atpE NC_000918.1 109189 109491 R ATP synthase F0 subunit c complement(109189..109491) Aquifex aeolicus VF5 1192706 NP_213125.1 CDS aq_178 NC_000918.1 109507 109914 R hypothetical protein complement(109507..109914) Aquifex aeolicus VF5 1192707 NP_213126.1 CDS atpB NC_000918.1 109916 110566 R ATP synthase F0 subunit a complement(109916..110566) Aquifex aeolicus VF5 1192708 NP_213127.1 CDS hisF NC_000918.1 110616 111377 D catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 110616..111377 Aquifex aeolicus VF5 1192709 NP_213128.1 CDS aq_182 NC_000918.1 111355 112101 R hypothetical protein complement(111355..112101) Aquifex aeolicus VF5 1192710 NP_213129.1 CDS aq_183 NC_000918.1 112111 113304 R hypothetical protein complement(112111..113304) Aquifex aeolicus VF5 1192711 NP_213130.1 CDS rpoZ NC_000918.1 113301 113531 R RNA polymerase subunit omega complement(113301..113531) Aquifex aeolicus VF5 1192712 NP_213132.1 CDS tagD1 NC_000918.1 114179 114652 R glycerol-3-phosphate cytidyltransferase complement(114179..114652) Aquifex aeolicus VF5 1192714 NP_213133.1 CDS aldH1 NC_000918.1 114649 116079 R aldehyde dehydrogenase complement(114649..116079) Aquifex aeolicus VF5 1192715 NP_213134.1 CDS hslU NC_000918.1 116090 117442 R heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU complement(116090..117442) Aquifex aeolicus VF5 1192716 NP_213135.1 CDS aq_194 NC_000918.1 117420 117884 R hypothetical protein complement(117420..117884) Aquifex aeolicus VF5 1192717 NP_213136.1 CDS trpD NC_000918.1 117938 118960 D Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 117938..118960 Aquifex aeolicus VF5 1192718 NP_213137.1 CDS aq_197 NC_000918.1 118960 120162 D hypothetical protein 118960..120162 Aquifex aeolicus VF5 1192719 NP_213138.1 CDS aq_199 NC_000918.1 120228 121451 D hypothetical protein 120228..121451 Aquifex aeolicus VF5 1192720 NP_213139.1 CDS aq_200 NC_000918.1 121448 122074 D hypothetical protein 121448..122074 Aquifex aeolicus VF5 1192721 NP_213140.1 CDS aq_202 NC_000918.1 122071 122679 D HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; deoxyribonucleotide triphosphate pyrophosphatase 122071..122679 Aquifex aeolicus VF5 1192722 NP_213141.1 CDS atpG2 NC_000918.1 122663 123844 D ATP synthase F1 subunit gamma 122663..123844 Aquifex aeolicus VF5 1192723 NP_213142.1 CDS aq_204 NC_000918.1 123819 124700 R hypothetical protein complement(123819..124700) Aquifex aeolicus VF5 1192724 NP_213143.1 CDS nirB NC_000918.1 124821 127829 D nitrite reductase (NAD(P)H) large subunit 124821..127829 Aquifex aeolicus VF5 1192725 NP_213144.1 CDS cobA NC_000918.1 127845 128579 D uroporphyrin-III c-methyltransferase 127845..128579 Aquifex aeolicus VF5 1192818 NP_213145.1 CDS trpD2 NC_000918.1 128584 129513 D phosphoribosylanthranilate transferase 128584..129513 Aquifex aeolicus VF5 1192819 NP_213146.1 CDS fhp NC_000918.1 129647 130066 D flavohemoprotein 129647..130066 Aquifex aeolicus VF5 1192820 NP_213147.1 CDS cynS NC_000918.1 130079 130528 D catalyzes the reaction of cyanate and bicarbonate to produce ammonia and carbon dioxide; cyanate hydratase 130079..130528 Aquifex aeolicus VF5 1192821 NP_213148.1 CDS glnBi NC_000918.1 130544 131161 D PII-like protein GlnBi 130544..131161 Aquifex aeolicus VF5 1192822 NP_213149.1 CDS nasA NC_000918.1 131158 132585 D nitrate transporter 131158..132585 Aquifex aeolicus VF5 1192823 NP_213150.1 CDS narB NC_000918.1 132582 134582 D nitrate reductase narB 132582..134582 Aquifex aeolicus VF5 1192824 NP_213151.1 CDS nifA NC_000918.1 134585 136105 R NifA family transcriptional regulator complement(134585..136105) Aquifex aeolicus VF5 1192825 NP_213152.1 CDS dut NC_000918.1 136122 136574 R deoxyuridine 5'triphosphate nucleotidohydrolase complement(136122..136574) Aquifex aeolicus VF5 1192826 NP_213153.1 CDS phpA NC_000918.1 136567 138894 R polynucleotide phosphorylase/polyadenylase complement(136567..138894) Aquifex aeolicus VF5 1192827 NP_213154.1 CDS rpsO NC_000918.1 138897 139169 R primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 complement(138897..139169) Aquifex aeolicus VF5 1192828 NP_213155.1 CDS aldH2 NC_000918.1 139228 141390 R aldehyde dehydrogenase complement(139228..141390) Aquifex aeolicus VF5 1192829 NP_213156.1 CDS ntrC3 NC_000918.1 141804 143150 D NtrC family transcriptional regulator 141804..143150 Aquifex aeolicus VF5 1192830 NP_213157.1 CDS hksP4 NC_000918.1 143094 144113 R histidine kinase sensor protein complement(143094..144113) Aquifex aeolicus VF5 1192831 NP_213158.1 CDS dhsU NC_000918.1 144275 145585 D flavocytochrome C sulfide dehydrogenase 144275..145585 Aquifex aeolicus VF5 1192832 NP_213159.1 CDS soxF NC_000918.1 145595 146311 D Rieske-I iron sulfur protein 145595..146311 Aquifex aeolicus VF5 1192833 NP_213160.1 CDS fccB' NC_000918.1 146292 147545 D sulfide dehydrogenase, flavoprotein subunit 146292..147545 Aquifex aeolicus VF5 1192834 NP_213161.1 CDS guaA NC_000918.1 147546 149078 R contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase complement(147546..149078) Aquifex aeolicus VF5 1192835 NP_213162.1 CDS sodC2 NC_000918.1 149124 149639 D superoxide dismutase (Cu/Zn) 149124..149639 Aquifex aeolicus VF5 1192836 NP_213163.1 CDS folE NC_000918.1 149720 150274 D involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I 149720..150274 Aquifex aeolicus VF5 1192837 NP_213164.1 CDS aq_240 NC_000918.1 150271 151173 R hypothetical protein complement(150271..151173) Aquifex aeolicus VF5 1192838 NP_213165.1 CDS lon NC_000918.1 151206 153593 D Lon protease 151206..153593 Aquifex aeolicus VF5 1192839 NP_213166.1 CDS aq_243 NC_000918.1 153580 155067 R hypothetical protein complement(153580..155067) Aquifex aeolicus VF5 1192840 NP_213167.1 CDS leuB NC_000918.1 155054 156148 R catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase complement(155054..156148) Aquifex aeolicus VF5 1192841 NP_213168.1 CDS purK NC_000918.1 156794 157891 D With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit 156794..157891 Aquifex aeolicus VF5 1192842 NP_213169.1 CDS aq_246 NC_000918.1 157857 158696 R hypothetical protein complement(157857..158696) Aquifex aeolicus VF5 1192843 NP_213170.1 CDS gatA NC_000918.1 158696 160132 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A complement(158696..160132) Aquifex aeolicus VF5 1192844 NP_213171.1 CDS aq_250 NC_000918.1 160145 160582 R hypothetical protein complement(160145..160582) Aquifex aeolicus VF5 1192845 NP_213172.1 CDS aq_251 NC_000918.1 160629 161309 R Responsible for removing an oxidatively damaged form of guanine (7,8-dihydro-8-oxoguanine = 7-oxoG) from DNA. Also nicks DNA at apurinic/apyrimidinic sites; N-glycosylase/DNA lyase complement(160629..161309) Aquifex aeolicus VF5 1192846 NP_213173.1 CDS aq_252 NC_000918.1 161325 161744 R hypothetical protein complement(161325..161744) Aquifex aeolicus VF5 1192847 NP_213174.1 CDS kdtB NC_000918.1 161732 162217 R lipopolysaccharide core biosynthesis protein complement(161732..162217) Aquifex aeolicus VF5 1192848 NP_213175.1 CDS aq_254 NC_000918.1 162752 163159 D Decarboxylation of S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine; S-adenosylmethionine decarboxylase 162752..163159 Aquifex aeolicus VF5 1192849 NP_213176.1 CDS aq_255 NC_000918.1 163193 163678 D hypothetical protein 163193..163678 Aquifex aeolicus VF5 1192850 NP_213177.1 CDS ygcA NC_000918.1 164100 165377 R RNA methyltransferase complement(164100..165377) Aquifex aeolicus VF5 1192851 NP_213178.1 CDS nusA NC_000918.1 165358 166371 R modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA complement(165358..166371) Aquifex aeolicus VF5 1192852 NP_213179.1 CDS aq_260 NC_000918.1 166365 166841 R hypothetical protein complement(166365..166841) Aquifex aeolicus VF5 1192853 YP_008920727.1 CDS aq_260a NC_000918.1 167377 167571 R hypothetical protein complement(167377..167571) Aquifex aeolicus VF5 17925346 NP_213180.1 CDS aq_262 NC_000918.1 167586 168155 R hypothetical protein complement(167586..168155) Aquifex aeolicus VF5 1192854 NP_213181.1 CDS hemC NC_000918.1 168918 169889 D transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 168918..169889 Aquifex aeolicus VF5 1192855 NP_213182.1 CDS aq_264 NC_000918.1 169886 170539 D hypothetical protein 169886..170539 Aquifex aeolicus VF5 1192856 NP_213183.1 CDS aq_265 NC_000918.1 170475 171491 R hypothetical protein complement(170475..171491) Aquifex aeolicus VF5 1192857 NP_213184.1 CDS aq_267 NC_000918.1 171596 172732 D hypothetical protein 171596..172732 Aquifex aeolicus VF5 1192858 NP_213185.1 CDS aq_268 NC_000918.1 172848 173318 D hypothetical protein 172848..173318 Aquifex aeolicus VF5 1192859 NP_213186.1 CDS aq_269 NC_000918.1 173338 173826 R hypothetical protein complement(173338..173826) Aquifex aeolicus VF5 1192860 NP_213187.1 CDS lgt NC_000918.1 173860 174678 D prolipoprotein diacylglyceryl transferase 173860..174678 Aquifex aeolicus VF5 1192861 NP_213188.1 CDS aq_271 NC_000918.1 174675 175886 D hypothetical protein 174675..175886 Aquifex aeolicus VF5 1192862 NP_213189.1 CDS aq_272 NC_000918.1 175879 176328 R hypothetical protein complement(175879..176328) Aquifex aeolicus VF5 1192863 NP_213190.1 CDS aspC4 NC_000918.1 176409 177572 D catalyzes the formation of LL-diaminopimelate from tetrahydrodipicolinate; involved in lysine and peptidoglycan synthesis; LL-diaminopimelate aminotransferase 176409..177572 Aquifex aeolicus VF5 1192864 NP_213191.1 CDS aq_274 NC_000918.1 177613 178299 D hypothetical protein 177613..178299 Aquifex aeolicus VF5 1192865 NP_213192.1 CDS aq_276 NC_000918.1 178587 179963 R hypothetical protein complement(178587..179963) Aquifex aeolicus VF5 1192866 NP_213195.1 CDS acrR3 NC_000918.1 183235 183774 R TetR/AcrR family transcriptional regulator complement(183235..183774) Aquifex aeolicus VF5 1192869 NP_213196.1 CDS mutY1 NC_000918.1 183890 184531 D endonuclease III 183890..184531 Aquifex aeolicus VF5 1192870 NP_213197.1 CDS aq_283 NC_000918.1 184528 185025 R hypothetical protein complement(184528..185025) Aquifex aeolicus VF5 1192871 NP_213198.1 CDS aq_284 NC_000918.1 185022 186344 R catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase complement(185022..186344) Aquifex aeolicus VF5 1192872 NP_213199.1 CDS aq_286 NC_000918.1 186373 186900 R hypothetical protein complement(186373..186900) Aquifex aeolicus VF5 1192873 NP_213200.1 CDS smpB NC_000918.1 186900 187373 R binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein complement(186900..187373) Aquifex aeolicus VF5 1192874 NP_213201.1 CDS aq_288 NC_000918.1 187381 188349 R hypothetical protein complement(187381..188349) Aquifex aeolicus VF5 1192875 NP_213202.1 CDS aq_291 NC_000918.1 188378 189856 D hypothetical protein 188378..189856 Aquifex aeolicus VF5 1192876 NP_213203.1 CDS aq_293 NC_000918.1 189867 190262 D hypothetical protein 189867..190262 Aquifex aeolicus VF5 1192877 NP_213204.1 CDS aq_294 NC_000918.1 190268 191383 D hypothetical protein 190268..191383 Aquifex aeolicus VF5 1192878 NP_213205.1 CDS aq_296 NC_000918.1 191380 192630 D hypothetical protein 191380..192630 Aquifex aeolicus VF5 1192879 NP_213206.1 CDS abcT8 NC_000918.1 192623 193297 D ABC transporter 192623..193297 Aquifex aeolicus VF5 1192880 NP_213207.1 CDS serS NC_000918.1 193284 194561 R catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase complement(193284..194561) Aquifex aeolicus VF5 1192881 NP_213208.1 CDS glmS NC_000918.1 194591 196369 D Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 194591..196369 Aquifex aeolicus VF5 1192882 NP_213209.1 CDS aq_302 NC_000918.1 196370 196714 R hypothetical protein complement(196370..196714) Aquifex aeolicus VF5 1192883 NP_213210.1 CDS aq_303 NC_000918.1 196711 197817 R hypothetical protein complement(196711..197817) Aquifex aeolicus VF5 1192884 NP_213211.1 CDS ileS NC_000918.1 197804 200674 R isoleucyl-tRNA synthetase complement(197804..200674) Aquifex aeolicus VF5 1192885 NP_213212.1 CDS mutS1 NC_000918.1 200713 203292 D This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 200713..203292 Aquifex aeolicus VF5 1192886 NP_213213.1 CDS aq_311 NC_000918.1 204008 204754 R hypothetical protein complement(204008..204754) Aquifex aeolicus VF5 1192887 NP_213214.1 CDS aq_313 NC_000918.1 204741 205580 R hypothetical protein complement(204741..205580) Aquifex aeolicus VF5 1192888 NP_213215.1 CDS aq_314 NC_000918.1 205589 206026 R hypothetical protein complement(205589..206026) Aquifex aeolicus VF5 1192889 NP_213216.1 CDS hksP2 NC_000918.1 206135 207067 R histidine kinase sensor protein complement(206135..207067) Aquifex aeolicus VF5 1192890 NP_213217.1 CDS phoB NC_000918.1 207352 208038 D PhoB family transcriptional regulator 207352..208038 Aquifex aeolicus VF5 1192891 NP_213218.1 CDS aq_321 NC_000918.1 208049 208645 D hypothetical protein 208049..208645 Aquifex aeolicus VF5 1192892 NP_213219.1 CDS dnaA NC_000918.1 208642 209841 R chromosome replication initiator protein DnaA complement(208642..209841) Aquifex aeolicus VF5 1192893 NP_213220.1 CDS aq_323 NC_000918.1 209932 210942 R hypothetical protein complement(209932..210942) Aquifex aeolicus VF5 1192894 NP_213221.1 CDS aq_324 NC_000918.1 211034 211816 D hypothetical protein 211034..211816 Aquifex aeolicus VF5 1192895 NP_213222.1 CDS murI NC_000918.1 211813 212577 R glutamate racemase complement(211813..212577) Aquifex aeolicus VF5 1192896 NP_213223.1 CDS kdtA NC_000918.1 212605 213666 D 3-deoxy-D-manno-2-octulosonate transferase 212605..213666 Aquifex aeolicus VF5 1192897 NP_213224.1 CDS aq_327 NC_000918.1 213641 214411 R hypothetical protein complement(213641..214411) Aquifex aeolicus VF5 1192898 NP_213225.1 CDS aq_328 NC_000918.1 214370 214885 D hypothetical protein 214370..214885 Aquifex aeolicus VF5 1192899 NP_213226.1 CDS aq_331 NC_000918.1 214915 215796 D hypothetical protein 214915..215796 Aquifex aeolicus VF5 1192900 NP_213227.1 CDS dcuP NC_000918.1 215954 216970 D uroporphyrinogen decarboxylase 215954..216970 Aquifex aeolicus VF5 1192901 NP_213229.1 CDS cysQ NC_000918.1 217910 218716 R CysQ protein complement(217910..218716) Aquifex aeolicus VF5 1192903 NP_213230.1 CDS aq_338 NC_000918.1 218720 219373 R hypothetical protein complement(218720..219373) Aquifex aeolicus VF5 1192904 NP_213231.1 CDS aq_340 NC_000918.1 219402 221159 D hypothetical protein 219402..221159 Aquifex aeolicus VF5 1192905 NP_213232.1 CDS aq_341 NC_000918.1 222065 222556 D hypothetical protein 222065..222556 Aquifex aeolicus VF5 1192906 NP_213233.1 CDS aq_342 NC_000918.1 222567 223340 D hypothetical protein 222567..223340 Aquifex aeolicus VF5 1192907 NP_213234.1 CDS arsA2 NC_000918.1 223332 224231 R anion transporting ATPase complement(223332..224231) Aquifex aeolicus VF5 1192908 NP_213235.1 CDS rfaD NC_000918.1 224228 225160 R ADP-L-glycero-D-manno-heptose-6-epimerase complement(224228..225160) Aquifex aeolicus VF5 1192909 NP_213236.1 CDS aq_345 NC_000918.1 225588 227465 D hypothetical protein 225588..227465 Aquifex aeolicus VF5 1193002 NP_213237.1 CDS pth NC_000918.1 227462 228040 R Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase complement(227462..228040) Aquifex aeolicus VF5 1193003 NP_213239.1 CDS ribA NC_000918.1 228716 229936 D GTP cyclohydrolase II 228716..229936 Aquifex aeolicus VF5 1193005 NP_213240.1 CDS leuS NC_000918.1 229933 231837 R leucyl-tRNA synthetase complement(229933..231837) Aquifex aeolicus VF5 1193006 NP_213241.1 CDS aq_355 NC_000918.1 231841 232578 R hypothetical protein complement(231841..232578) Aquifex aeolicus VF5 1193007 NP_213242.1 CDS leuA1 NC_000918.1 232592 234178 R catalyzes the formation of 2-isopropylmalate from 1-methyl-2-oxobutanoate and acetyl-CoA; alpha-isopropylmalate/homocitrate synthase family transferase complement(232592..234178) Aquifex aeolicus VF5 1193008 NP_213243.1 CDS flgM NC_000918.1 234260 234526 D anti sigma factor FlgM 234260..234526 Aquifex aeolicus VF5 1193009 NP_213244.1 CDS dinG NC_000918.1 234590 236518 D ATP-dependent helicase DinG 234590..236518 Aquifex aeolicus VF5 1193010 NP_213245.1 CDS aq_359 NC_000918.1 236530 237600 D hypothetical protein 236530..237600 Aquifex aeolicus VF5 1193011 NP_213246.1 CDS tpiA NC_000918.1 237559 238302 R Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase complement(237559..238302) Aquifex aeolicus VF5 1193012 NP_213247.1 CDS aq_362 NC_000918.1 238638 239435 R hypothetical protein complement(238638..239435) Aquifex aeolicus VF5 1193013 NP_213248.1 CDS aq_363 NC_000918.1 239435 239866 R hypothetical protein complement(239435..239866) Aquifex aeolicus VF5 1193014 NP_213249.1 CDS aq_364 NC_000918.1 239863 240240 R hypothetical protein complement(239863..240240) Aquifex aeolicus VF5 1193015 NP_213250.1 CDS proS NC_000918.1 240237 241949 R catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase complement(240237..241949) Aquifex aeolicus VF5 1193016 NP_213251.1 CDS aq_367 NC_000918.1 241994 244546 D hypothetical protein 241994..244546 Aquifex aeolicus VF5 1193017 NP_213252.1 CDS aq_369 NC_000918.1 245338 246288 R hypothetical protein complement(245338..246288) Aquifex aeolicus VF5 1193018 NP_213253.1 CDS aq_370 NC_000918.1 246281 246814 R hypothetical protein complement(246281..246814) Aquifex aeolicus VF5 1193019 NP_213254.1 CDS aq_371 NC_000918.1 246792 248981 R hypothetical protein complement(246792..248981) Aquifex aeolicus VF5 1193020 NP_213255.1 CDS aq_372 NC_000918.1 248932 250527 R hypothetical protein complement(248932..250527) Aquifex aeolicus VF5 1193021 NP_213256.1 CDS aq_373 NC_000918.1 250518 251177 R hypothetical protein complement(250518..251177) Aquifex aeolicus VF5 1193022 NP_213257.1 CDS aq_374 NC_000918.1 251158 252231 R hypothetical protein complement(251158..252231) Aquifex aeolicus VF5 1193023 NP_213258.1 CDS aq_376 NC_000918.1 252309 253250 R hypothetical protein complement(252309..253250) Aquifex aeolicus VF5 1193024 NP_213259.1 CDS aq_377 NC_000918.1 253252 253587 R hypothetical protein complement(253252..253587) Aquifex aeolicus VF5 1193025 NP_213260.1 CDS aq_378 NC_000918.1 253592 254953 R hypothetical protein complement(253592..254953) Aquifex aeolicus VF5 1193026 NP_213261.1 CDS aq_380 NC_000918.1 254950 256071 R hypothetical protein complement(254950..256071) Aquifex aeolicus VF5 1193027 NP_213262.1 CDS aq_381 NC_000918.1 256087 256986 R hypothetical protein complement(256087..256986) Aquifex aeolicus VF5 1193028 NP_213263.1 CDS aq_382 NC_000918.1 257019 257906 R hypothetical protein complement(257019..257906) Aquifex aeolicus VF5 1193029 NP_213264.1 CDS aq_383 NC_000918.1 257872 258615 R hypothetical protein complement(257872..258615) Aquifex aeolicus VF5 1193030 NP_213265.1 CDS aq_384 NC_000918.1 258857 259258 R hypothetical protein complement(258857..259258) Aquifex aeolicus VF5 1193031 NP_213266.1 CDS aq_385 NC_000918.1 259248 260135 R hypothetical protein complement(259248..260135) Aquifex aeolicus VF5 1193032 NP_213267.1 CDS aq_386 NC_000918.1 260132 261109 R hypothetical protein complement(260132..261109) Aquifex aeolicus VF5 1193033 NP_213268.1 CDS aq_387 NC_000918.1 261090 262955 R hypothetical protein complement(261090..262955) Aquifex aeolicus VF5 1193034 NP_213269.1 CDS aq_388 NC_000918.1 263585 264490 D hypothetical protein 263585..264490 Aquifex aeolicus VF5 1193035 YP_008920728.1 CDS aq_388a NC_000918.1 264847 265086 D response regulator SirA 264847..265086 Aquifex aeolicus VF5 17925347 NP_213270.1 CDS aq_389 NC_000918.1 265099 265647 D hypothetical protein 265099..265647 Aquifex aeolicus VF5 1193036 NP_213271.1 CDS aq_390 NC_000918.1 265667 266092 D hypothetical protein 265667..266092 Aquifex aeolicus VF5 1193037 NP_213272.1 CDS aq_391 NC_000918.1 266219 266971 D hypothetical protein 266219..266971 Aquifex aeolicus VF5 1193038 NP_213275.1 CDS hdrA NC_000918.1 268431 269489 D heterodisulfide reductase subunit A 268431..269489 Aquifex aeolicus VF5 1193041 NP_213276.1 CDS aq_397 NC_000918.1 269486 270304 D hypothetical protein 269486..270304 Aquifex aeolicus VF5 1193042 NP_213277.1 CDS hdrC NC_000918.1 270319 271080 D heterodisulfide reductase subunit C 270319..271080 Aquifex aeolicus VF5 1193043 NP_213278.1 CDS hdrB NC_000918.1 271093 272088 D heterodisulfide reductase subunit B 271093..272088 Aquifex aeolicus VF5 1193044 NP_213279.1 CDS aq_401 NC_000918.1 272163 272570 D hypothetical protein 272163..272570 Aquifex aeolicus VF5 1193045 NP_213280.1 CDS aq_402 NC_000918.1 272598 273044 D part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H 272598..273044 Aquifex aeolicus VF5 1193046 NP_213281.1 CDS aq_403 NC_000918.1 273087 274112 D hypothetical protein 273087..274112 Aquifex aeolicus VF5 1193047 NP_213282.1 CDS aq_404 NC_000918.1 274129 275271 D catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 274129..275271 Aquifex aeolicus VF5 1193048 NP_213283.1 CDS aq_406 NC_000918.1 275231 276100 R hypothetical protein complement(275231..276100) Aquifex aeolicus VF5 1193049 NP_213284.1 CDS aq_407 NC_000918.1 276097 276708 R hypothetical protein complement(276097..276708) Aquifex aeolicus VF5 1193050 NP_213285.1 CDS aq_408 NC_000918.1 276724 277248 R hypothetical protein complement(276724..277248) Aquifex aeolicus VF5 1193051 NP_213286.1 CDS pyrB NC_000918.1 277239 278114 R aspartate carbamoyltransferase complement(277239..278114) Aquifex aeolicus VF5 1193052 NP_213287.1 CDS carA NC_000918.1 278111 279226 R catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit complement(278111..279226) Aquifex aeolicus VF5 1193053 NP_213288.1 CDS pcnB1 NC_000918.1 279846 282320 D poly A polymerase 279846..282320 Aquifex aeolicus VF5 1193054 NP_213289.1 CDS abcT7 NC_000918.1 282323 283039 D ABC transporter 282323..283039 Aquifex aeolicus VF5 1193055 NP_213290.1 CDS aq_414 NC_000918.1 283036 284355 D hypothetical protein 283036..284355 Aquifex aeolicus VF5 1193056 NP_213291.1 CDS napA1 NC_000918.1 284327 285490 D Na(+)/H(+) antiporter 284327..285490 Aquifex aeolicus VF5 1193057 NP_213292.1 CDS aq_416 NC_000918.1 285507 286553 D 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N 285507..286553 Aquifex aeolicus VF5 1193058 NP_213293.1 CDS abcT6 NC_000918.1 286550 287209 D ABC transporter 286550..287209 Aquifex aeolicus VF5 1193059 NP_213294.1 CDS gspG NC_000918.1 287456 287857 R general secretion pathway protein G complement(287456..287857) Aquifex aeolicus VF5 1193060 NP_213295.1 CDS aq_419 NC_000918.1 287857 288189 R hypothetical protein complement(287857..288189) Aquifex aeolicus VF5 1193061 NP_213296.1 CDS aq_420 NC_000918.1 288189 288536 R hypothetical protein complement(288189..288536) Aquifex aeolicus VF5 1193062 NP_213297.1 CDS aspC3 NC_000918.1 288568 289689 D aminotransferase 288568..289689 Aquifex aeolicus VF5 1193063 NP_213298.1 CDS metG' NC_000918.1 289705 290040 D methionyl-tRNA synthetase subunit beta 289705..290040 Aquifex aeolicus VF5 1193064 NP_213299.1 CDS aq_423 NC_000918.1 290037 290654 D hypothetical protein 290037..290654 Aquifex aeolicus VF5 1193065 NP_213300.1 CDS thrC2 NC_000918.1 290643 291701 R catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase complement(290643..291701) Aquifex aeolicus VF5 1193066 NP_213301.1 CDS aq_427 NC_000918.1 291728 292093 R hypothetical protein complement(291728..292093) Aquifex aeolicus VF5 1193067 NP_213302.1 CDS aq_428 NC_000918.1 292111 292557 R hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase complement(292111..292557) Aquifex aeolicus VF5 1193068 YP_008920729.1 CDS aq_427a NC_000918.1 292559 292801 R hypothetical protein complement(292559..292801) Aquifex aeolicus VF5 17925348 NP_213303.1 CDS aq_429 NC_000918.1 292832 293572 D hypothetical protein 292832..293572 Aquifex aeolicus VF5 1193069 NP_213304.1 CDS aq_430 NC_000918.1 293549 294100 R hypothetical protein complement(293549..294100) Aquifex aeolicus VF5 1193070 NP_213305.1 CDS grpE NC_000918.1 294248 294796 R heat shock protein GrpE complement(294248..294796) Aquifex aeolicus VF5 1193071 NP_213306.1 CDS glpK NC_000918.1 294816 296294 R glycerol kinase complement(294816..296294) Aquifex aeolicus VF5 1193072 NP_213307.1 CDS ribD2 NC_000918.1 296291 296965 R riboflavin specific deaminase complement(296291..296965) Aquifex aeolicus VF5 1193073 NP_213308.1 CDS nuoG NC_000918.1 297105 299003 D NADH dehydrogenase I subunit G 297105..299003 Aquifex aeolicus VF5 1193074 NP_213311.1 CDS aq_440 NC_000918.1 300870 301664 D hypothetical protein 300870..301664 Aquifex aeolicus VF5 1193077 NP_213312.1 CDS aq_442 NC_000918.1 301661 302320 R hypothetical protein complement(301661..302320) Aquifex aeolicus VF5 1193078 NP_213313.1 CDS gua NC_000918.1 302447 303136 D glutaredoxin-like protein 302447..303136 Aquifex aeolicus VF5 1193079 NP_213314.1 CDS accD NC_000918.1 303136 303966 D acetyl-CoA carboxyltransferase subunit beta 303136..303966 Aquifex aeolicus VF5 1193080 NP_213315.1 CDS mgtC NC_000918.1 303963 304640 D Mg(2+) transport ATPase 303963..304640 Aquifex aeolicus VF5 1193081 NP_213316.1 CDS aq_448 NC_000918.1 304651 304941 D hypothetical protein 304651..304941 Aquifex aeolicus VF5 1193082 NP_213317.1 CDS aq_449 NC_000918.1 304932 305306 D hypothetical protein 304932..305306 Aquifex aeolicus VF5 1193083 NP_213318.1 CDS aq_450 NC_000918.1 305303 305620 D hypothetical protein 305303..305620 Aquifex aeolicus VF5 1193084 NP_213319.1 CDS ilvB NC_000918.1 305617 307374 R acetolactate synthase large subunit complement(305617..307374) Aquifex aeolicus VF5 1193085 NP_213320.1 CDS aq_453 NC_000918.1 307708 308481 R hypothetical protein complement(307708..308481) Aquifex aeolicus VF5 1193086 NP_213321.1 CDS aq_454 NC_000918.1 308469 309581 R hypothetical protein complement(308469..309581) Aquifex aeolicus VF5 1193087 NP_213322.1 CDS sor NC_000918.1 309613 310614 R sulfur oxygenase reductase complement(309613..310614) Aquifex aeolicus VF5 1193088 NP_213323.1 CDS bcp NC_000918.1 310732 311235 D bacterioferritin comigratory protein 310732..311235 Aquifex aeolicus VF5 1193089 NP_213324.1 CDS aq_459 NC_000918.1 311258 311782 D hypothetical protein 311258..311782 Aquifex aeolicus VF5 1193090 NP_213325.1 CDS aq_460 NC_000918.1 311779 312390 D hypothetical protein 311779..312390 Aquifex aeolicus VF5 1193091 NP_213326.1 CDS gatB NC_000918.1 312402 313838 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 312402..313838 Aquifex aeolicus VF5 1193092 NP_213327.1 CDS aq_465 NC_000918.1 313851 314192 D hypothetical protein 313851..314192 Aquifex aeolicus VF5 1193093 NP_213328.1 CDS aq_467 NC_000918.1 314640 315419 D hypothetical protein 314640..315419 Aquifex aeolicus VF5 1193186 NP_213329.1 CDS czcB3 NC_000918.1 315416 316495 D cation efflux system CzcB-like protein 315416..316495 Aquifex aeolicus VF5 1193187 NP_213330.1 CDS acrD3 NC_000918.1 316510 319569 D AcrB/AcrD/AcrF family cation efflux protein 316510..319569 Aquifex aeolicus VF5 1193188 NP_213331.1 CDS aq_473 NC_000918.1 319586 320233 D hypothetical protein 319586..320233 Aquifex aeolicus VF5 1193189 NP_213332.1 CDS aq_474 NC_000918.1 320225 321457 R hypothetical protein complement(320225..321457) Aquifex aeolicus VF5 1193190 NP_213333.1 CDS panD NC_000918.1 322201 322575 D Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase 322201..322575 Aquifex aeolicus VF5 1193191 NP_213334.1 CDS aq_477 NC_000918.1 322577 322909 D hypothetical protein 322577..322909 Aquifex aeolicus VF5 1193192 NP_213335.1 CDS aq_478 NC_000918.1 322899 324134 R hypothetical protein complement(322899..324134) Aquifex aeolicus VF5 1193193 NP_213336.1 CDS glyA NC_000918.1 324100 325386 R catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase complement(324100..325386) Aquifex aeolicus VF5 1193194 NP_213337.1 CDS oppB NC_000918.1 325395 326378 R transporter complement(325395..326378) Aquifex aeolicus VF5 1193195 NP_213338.1 CDS eno NC_000918.1 326762 328042 D enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 326762..328042 Aquifex aeolicus VF5 1193196 NP_213339.1 CDS ahpC1 NC_000918.1 328330 328965 R alkyl hydroperoxide reductase complement(328330..328965) Aquifex aeolicus VF5 1193197 NP_213340.1 CDS tpx NC_000918.1 329019 329528 R thiol peroxidase complement(329019..329528) Aquifex aeolicus VF5 1193198 NP_213341.1 CDS fnr NC_000918.1 329597 330319 R Crp family transcriptional regulator complement(329597..330319) Aquifex aeolicus VF5 1193199 NP_213345.1 CDS aq_495 NC_000918.1 332980 333465 D hypothetical protein 332980..333465 Aquifex aeolicus VF5 1193203 NP_213346.1 CDS mutY3 NC_000918.1 333390 334088 D endonuclease III 333390..334088 Aquifex aeolicus VF5 1193204 NP_213347.1 CDS gsdA NC_000918.1 334072 335367 R catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase complement(334072..335367) Aquifex aeolicus VF5 1193205 NP_213348.1 CDS gnd NC_000918.1 335330 336232 R similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate; 6-phosphogluconate dehydrogenase complement(335330..336232) Aquifex aeolicus VF5 1193206 NP_213349.1 CDS aq_499 NC_000918.1 336232 337032 R hypothetical protein complement(336232..337032) Aquifex aeolicus VF5 1193207 NP_213350.1 CDS trxB NC_000918.1 337114 338085 R thioredoxin reductase complement(337114..338085) Aquifex aeolicus VF5 1193208 NP_213351.1 CDS pmu NC_000918.1 338228 339727 R phosphoglucomutase/phosphomannomutase complement(338228..339727) Aquifex aeolicus VF5 1193209 NP_213352.1 CDS aq_503 NC_000918.1 339619 340080 R hypothetical protein complement(339619..340080) Aquifex aeolicus VF5 1193210 NP_213353.1 CDS otnA' NC_000918.1 340164 340583 R polysaccharide biosynthesis protein (fragment) complement(340164..340583) Aquifex aeolicus VF5 1193211 NP_213354.1 CDS otnA NC_000918.1 340614 342791 R polysaccharide biosynthesis protein complement(340614..342791) Aquifex aeolicus VF5 1193212 NP_213355.1 CDS aq_506 NC_000918.1 342733 344034 R hypothetical protein complement(342733..344034) Aquifex aeolicus VF5 1193213 NP_213356.2 CDS aq_507 NC_000918.1 344006 344278 D hypothetical protein 344006..344278 Aquifex aeolicus VF5 1193214 NP_213357.1 CDS aq_509 NC_000918.1 345070 346395 D hypothetical protein 345070..346395 Aquifex aeolicus VF5 1193215 NP_213358.1 CDS aq_510 NC_000918.1 346396 346866 D hypothetical protein 346396..346866 Aquifex aeolicus VF5 1193216 NP_213359.1 CDS murB2 NC_000918.1 346905 347546 D UDP-N-acetoenolpyruvoylglucosamine reductase 346905..347546 Aquifex aeolicus VF5 1193217 NP_213360.1 CDS aq_512 NC_000918.1 347383 348366 R hypothetical protein complement(347383..348366) Aquifex aeolicus VF5 1193218 NP_213361.1 CDS mtfB NC_000918.1 349447 350571 D mannosyltransferase B 349447..350571 Aquifex aeolicus VF5 1193219 NP_213362.1 CDS mtfC NC_000918.1 350568 351674 D mannosyltransferase C 350568..351674 Aquifex aeolicus VF5 1193220 NP_213363.1 CDS spsK NC_000918.1 351738 352151 D spore coat polysaccharide biosynthesis protein SpsK 351738..352151 Aquifex aeolicus VF5 1193221 NP_213364.1 CDS rfe NC_000918.1 352120 353193 D UDP-phosphate-alpha-N- acetylglucosaminyltransferase 352120..353193 Aquifex aeolicus VF5 1193222 NP_213365.1 CDS murB1 NC_000918.1 353194 354087 D UDP-N-acetylenolpyruvoylglucosamine reductase 353194..354087 Aquifex aeolicus VF5 1193223 NP_213366.1 CDS ddlA NC_000918.1 354044 354919 D D-alanine--D-alanine ligase 354044..354919 Aquifex aeolicus VF5 1193224 NP_213367.1 CDS aq_522 NC_000918.1 354930 355580 D hypothetical protein 354930..355580 Aquifex aeolicus VF5 1193225 NP_213368.1 CDS ftsA NC_000918.1 355580 356830 D cell division protein FtsA 355580..356830 Aquifex aeolicus VF5 1193226 NP_213369.1 CDS ftsZ NC_000918.1 356843 357946 D GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 356843..357946 Aquifex aeolicus VF5 1193227 NP_213370.1 CDS moaC NC_000918.1 357943 358707 D molybdenum cofactor biosynthesis moaC 357943..358707 Aquifex aeolicus VF5 1193228 NP_213371.1 CDS dedF NC_000918.1 358695 359264 D phenylacrylic acid decarboxylase 358695..359264 Aquifex aeolicus VF5 1193229 NP_213372.1 CDS oprC NC_000918.1 359590 361632 R outer membrane protein c complement(359590..361632) Aquifex aeolicus VF5 1193230 NP_213373.1 CDS aq_531 NC_000918.1 361705 362493 D hypothetical protein 361705..362493 Aquifex aeolicus VF5 1193231 NP_213374.1 CDS aq_532 NC_000918.1 362461 363126 R hypothetical protein complement(362461..363126) Aquifex aeolicus VF5 1193232 NP_213375.1 CDS aq_533 NC_000918.1 363142 364284 R hypothetical protein complement(363142..364284) Aquifex aeolicus VF5 1193233 NP_213376.1 CDS draG NC_000918.1 364314 365306 D ADP-ribosylglycohydrolase 364314..365306 Aquifex aeolicus VF5 1193234 NP_213378.1 CDS aq_539 NC_000918.1 366297 367154 D hypothetical protein 366297..367154 Aquifex aeolicus VF5 1193236 NP_213379.1 CDS aq_540 NC_000918.1 367143 367787 R hypothetical protein complement(367143..367787) Aquifex aeolicus VF5 1193237 NP_213380.1 CDS bcpC NC_000918.1 368017 369240 D catalyzes the interconversion of 3-phosphoglycerate and 2-phosphoglycerate; this enzyme does not require the cofactor 2,3-bisphosphoglycerate as a phosphate donor; BPG-independent PGAM; aPGAM; cofactor-independent phosphoglycerate mutase 368017..369240 Aquifex aeolicus VF5 1193238 NP_213381.1 CDS hpt NC_000918.1 369242 369778 D hypoxanthine-guanine phosphoribosyltransferase 369242..369778 Aquifex aeolicus VF5 1193239 NP_213382.1 CDS aq_545 NC_000918.1 369760 370959 R hypothetical protein complement(369760..370959) Aquifex aeolicus VF5 1193240 NP_213383.1 CDS dapE NC_000918.1 371023 371922 D succinyl-diaminopimelate desuccinylase 371023..371922 Aquifex aeolicus VF5 1193241 NP_213384.1 CDS aq_548 NC_000918.1 372081 372647 R hypothetical protein complement(372081..372647) Aquifex aeolicus VF5 1193242 NP_213385.1 CDS trpG NC_000918.1 372746 373339 R anthranilate synthase component II complement(372746..373339) Aquifex aeolicus VF5 1193243 NP_213386.1 CDS nuoD1 NC_000918.1 373336 375117 R NADH dehydrogenase I subunit D complement(373336..375117) Aquifex aeolicus VF5 1193244 NP_213387.1 CDS sms NC_000918.1 375161 376495 R Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA complement(375161..376495) Aquifex aeolicus VF5 1193245 NP_213388.1 CDS frdB1 NC_000918.1 376504 377196 R fumarate reductase iron-sulfur subunit complement(376504..377196) Aquifex aeolicus VF5 1193246 NP_213389.1 CDS aq_554 NC_000918.1 377232 377948 R hypothetical protein complement(377232..377948) Aquifex aeolicus VF5 1193247 NP_213390.1 CDS aq_555 NC_000918.1 377884 378687 D hypothetical protein 377884..378687 Aquifex aeolicus VF5 1193248 NP_213391.1 CDS pbpA2 NC_000918.1 378689 380425 D penicillin binding protein 2 378689..380425 Aquifex aeolicus VF5 1193249 NP_213392.1 CDS bioD NC_000918.1 380398 381060 R dethiobiotin synthetase complement(380398..381060) Aquifex aeolicus VF5 1193250 NP_213393.1 CDS thiE NC_000918.1 381057 381704 R Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate; thiamine-phosphate pyrophosphorylase complement(381057..381704) Aquifex aeolicus VF5 1193251 NP_213394.1 CDS recN NC_000918.1 381742 383304 R recombination protein RecN complement(381742..383304) Aquifex aeolicus VF5 1193252 NP_213395.1 CDS aq_563 NC_000918.1 383468 385324 D hypothetical protein 383468..385324 Aquifex aeolicus VF5 1193253 NP_213396.1 CDS rfaE NC_000918.1 385335 386282 D ADP-heptose synthase 385335..386282 Aquifex aeolicus VF5 1193254 NP_213397.1 CDS birA NC_000918.1 386285 386986 D biotin [acetyl-CoA-carboxylase] ligase 386285..386986 Aquifex aeolicus VF5 1193255 NP_213398.1 CDS rimI NC_000918.1 386954 387418 R ribosomal-protein-alanine acetyltransferase complement(386954..387418) Aquifex aeolicus VF5 1193256 NP_213399.1 CDS deoD NC_000918.1 387432 388265 D purine nucleoside phosphorylase 387432..388265 Aquifex aeolicus VF5 1193257 NP_213400.1 CDS aq_572 NC_000918.1 388545 389645 R hypothetical protein complement(388545..389645) Aquifex aeolicus VF5 1193258 NP_213401.1 CDS nuoF NC_000918.1 389655 390935 R NADH dehydrogenase I subunit F complement(389655..390935) Aquifex aeolicus VF5 1193259 NP_213402.1 CDS nuoE NC_000918.1 390910 391392 R NADH dehydrogenase I subunit E complement(390910..391392) Aquifex aeolicus VF5 1193260 NP_213403.1 CDS aq_575 NC_000918.1 391412 392047 R hypothetical protein complement(391412..392047) Aquifex aeolicus VF5 1193261 NP_213404.1 CDS stpK NC_000918.1 392044 392859 R Ser/thr protein kinase complement(392044..392859) Aquifex aeolicus VF5 1193262 NP_213405.1 CDS aq_577 NC_000918.1 392890 393504 D hypothetical protein 392890..393504 Aquifex aeolicus VF5 1193263 NP_213406.1 CDS aq_578 NC_000918.1 393496 394074 R hypothetical protein complement(393496..394074) Aquifex aeolicus VF5 1193264 NP_213407.1 CDS def NC_000918.1 394092 394601 D polypeptide deformylase 394092..394601 Aquifex aeolicus VF5 1193265 NP_213408.1 CDS aq_581 NC_000918.1 394598 395125 D hypothetical protein 394598..395125 Aquifex aeolicus VF5 1193266 NP_213409.1 CDS trpE NC_000918.1 395126 396610 R anthranilate synthase component I complement(395126..396610) Aquifex aeolicus VF5 1193267 NP_213410.1 CDS aq_585 NC_000918.1 397306 399423 D hypothetical protein 397306..399423 Aquifex aeolicus VF5 1193268 NP_213411.1 CDS neaC NC_000918.1 399420 400712 R N-ethylammeline chlorohydrolase complement(399420..400712) Aquifex aeolicus VF5 1193269 NP_213412.1 CDS xanB NC_000918.1 400746 402107 D mannose-6-phosphate isomerase/mannose-1-phosphate guanyl transferase 400746..402107 Aquifex aeolicus VF5 1193270 NP_213413.1 CDS aq_591 NC_000918.1 402088 403089 D hypothetical protein 402088..403089 Aquifex aeolicus VF5 1193271 NP_213414.1 CDS aq_592 NC_000918.1 403186 404499 D hypothetical protein 403186..404499 Aquifex aeolicus VF5 1193272 NP_213415.1 CDS frdA NC_000918.1 404496 406211 R fumarate reductase flavoprotein subunit complement(404496..406211) Aquifex aeolicus VF5 1193273 NP_213416.1 CDS purB NC_000918.1 406507 407820 R adenylosuccinate lyase complement(406507..407820) Aquifex aeolicus VF5 1193274 NP_213417.1 CDS aq_598 NC_000918.1 407862 408254 R hypothetical protein complement(407862..408254) Aquifex aeolicus VF5 1193275 NP_213418.1 CDS rpoN NC_000918.1 408354 409550 D RNA polymerase sigma factor RpoN 408354..409550 Aquifex aeolicus VF5 1193276 NP_213419.1 CDS aq_600 NC_000918.1 409567 410049 R hypothetical protein complement(409567..410049) Aquifex aeolicus VF5 1193277 NP_213420.1 CDS aq_601 NC_000918.1 410406 410942 D hypothetical protein 410406..410942 Aquifex aeolicus VF5 1193922 NP_213421.1 CDS aq_603 NC_000918.1 411154 411972 D hypothetical protein 411154..411972 Aquifex aeolicus VF5 1193923 NP_213422.1 CDS lpxA NC_000918.1 412006 412791 D catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase 412006..412791 Aquifex aeolicus VF5 1193924 NP_213423.1 CDS glmU NC_000918.1 412805 414199 D UDP-N-acetylglucosamine pyrophosphorylase 412805..414199 Aquifex aeolicus VF5 1193925 NP_213424.1 CDS thrC1 NC_000918.1 414196 415425 R catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase complement(414196..415425) Aquifex aeolicus VF5 1193926 NP_213425.1 CDS aq_609 NC_000918.1 415436 416548 R translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD complement(415436..416548) Aquifex aeolicus VF5 1193927 NP_213427.1 CDS aq_615 NC_000918.1 418639 419037 D hypothetical protein 418639..419037 Aquifex aeolicus VF5 1193929 NP_213428.1 CDS aq_616 NC_000918.1 419071 419574 D hypothetical protein 419071..419574 Aquifex aeolicus VF5 1193930 NP_213429.1 CDS pfpI NC_000918.1 419585 420088 D protease I 419585..420088 Aquifex aeolicus VF5 1193931 NP_213430.1 CDS yfeA NC_000918.1 420088 420924 D adhesion B 420088..420924 Aquifex aeolicus VF5 1193932 NP_213431.1 CDS abcT2 NC_000918.1 420915 421613 D ABC transporter 420915..421613 Aquifex aeolicus VF5 1193933 NP_213433.1 CDS aq_622 NC_000918.1 422376 423338 R hypothetical protein complement(422376..423338) Aquifex aeolicus VF5 1193935 NP_213434.1 CDS mrcA NC_000918.1 423373 425553 D penicillin binding protein 1A 423373..425553 Aquifex aeolicus VF5 1193936 NP_213435.1 CDS bioF NC_000918.1 425550 426671 D 8-amino-7-oxononanoate synthase 425550..426671 Aquifex aeolicus VF5 1193937 NP_213436.1 CDS aq_627 NC_000918.1 426668 427594 R hypothetical protein complement(426668..427594) Aquifex aeolicus VF5 1193938 NP_213437.1 CDS aq_628 NC_000918.1 427634 428011 R hypothetical protein complement(427634..428011) Aquifex aeolicus VF5 1193939 YP_008920730.1 CDS aq_628a NC_000918.1 428194 428469 D MoaD family protein 428194..428469 Aquifex aeolicus VF5 17925349 NP_213438.1 CDS xcpC NC_000918.1 428466 431936 R chromosome assembly protein complement(428466..431936) Aquifex aeolicus VF5 1193940 NP_213439.1 CDS aq_632 NC_000918.1 432190 433143 R hypothetical protein complement(432190..433143) Aquifex aeolicus VF5 1193941 NP_213440.1 CDS ligA NC_000918.1 433166 435328 D DNA ligase 433166..435328 Aquifex aeolicus VF5 1193942 NP_213441.1 CDS aq_635 NC_000918.1 435320 435748 R hypothetical protein complement(435320..435748) Aquifex aeolicus VF5 1193943 NP_213442.1 CDS lysR1 NC_000918.1 436576 437487 R LysR family transcriptional regulator complement(436576..437487) Aquifex aeolicus VF5 1193944 NP_213443.1 CDS thy NC_000918.1 438038 438991 D thymidylate synthase complementing protein 438038..438991 Aquifex aeolicus VF5 1193945 NP_213444.1 CDS aq_642 NC_000918.1 439003 440085 R catalyzes the conversion of terminal3'-phosphate of RNA to the 2',3'-cyclicphosphodiester; RNA 3'-terminal-phosphate cyclase complement(439003..440085) Aquifex aeolicus VF5 1193946 NP_213445.1 CDS aq_644 NC_000918.1 440091 440774 R hypothetical protein complement(440091..440774) Aquifex aeolicus VF5 1193947 NP_213446.1 CDS aq_645 NC_000918.1 440821 442143 D hypothetical protein 440821..442143 Aquifex aeolicus VF5 1193948 NP_213447.1 CDS aq_647 NC_000918.1 442506 443915 D hypothetical protein 442506..443915 Aquifex aeolicus VF5 1193949 NP_213448.1 CDS aq_648 NC_000918.1 444064 445179 D hypothetical protein 444064..445179 Aquifex aeolicus VF5 1193950 NP_213449.1 CDS aq_651 NC_000918.1 445163 445759 R hypothetical protein complement(445163..445759) Aquifex aeolicus VF5 1193951 NP_213450.1 CDS nlpD1 NC_000918.1 445756 446805 R lipoprotein complement(445756..446805) Aquifex aeolicus VF5 1193952 NP_213451.1 CDS fliG NC_000918.1 447062 448048 R flagellar switch protein FliG complement(447062..448048) Aquifex aeolicus VF5 1193953 NP_213452.1 CDS frdB2 NC_000918.1 448050 448742 R fumarate reductase iron-sulfur subunit complement(448050..448742) Aquifex aeolicus VF5 1193954 NP_213453.1 CDS topA NC_000918.1 448782 450404 D topoisomerase I 448782..450404 Aquifex aeolicus VF5 1193955 NP_213454.1 CDS mbhS1 NC_000918.1 450916 451977 D hydrogenase small subunit 450916..451977 Aquifex aeolicus VF5 1193956 NP_213455.1 CDS mbhL1 NC_000918.1 451992 453893 D hydrogenase large subunit 451992..453893 Aquifex aeolicus VF5 1193957 NP_213456.1 CDS hoxZ NC_000918.1 453886 454572 D Ni/Fe hydrogenase B-type cytochrome subunit 453886..454572 Aquifex aeolicus VF5 1193958 NP_213457.1 CDS hupE NC_000918.1 454585 455127 D HupE hydrogenase related function 454585..455127 Aquifex aeolicus VF5 1193959 NP_213458.1 CDS hupD NC_000918.1 455140 455628 D HupD hydrogenase related function 455140..455628 Aquifex aeolicus VF5 1193960 NP_213459.1 CDS aq_668 NC_000918.1 455615 455953 D hypothetical protein 455615..455953 Aquifex aeolicus VF5 1193961 NP_213460.1 CDS aq_669 NC_000918.1 455947 456342 D hypothetical protein 455947..456342 Aquifex aeolicus VF5 1193962 NP_213461.1 CDS hypB NC_000918.1 456335 457114 D hydrogenase expression/formation protein B 456335..457114 Aquifex aeolicus VF5 1193963 NP_213462.1 CDS hypF NC_000918.1 457083 459323 D transcriptional regulatory protein HypF 457083..459323 Aquifex aeolicus VF5 1193964 NP_213463.1 CDS atpC NC_000918.1 459334 459732 D ATP synthase F1 subunit epsilon 459334..459732 Aquifex aeolicus VF5 1193965 NP_213464.1 CDS aq_674 NC_000918.1 459716 460435 D hypothetical protein 459716..460435 Aquifex aeolicus VF5 1193966 NP_213465.1 CDS aq_676 NC_000918.1 460432 461010 R hypothetical protein complement(460432..461010) Aquifex aeolicus VF5 1193967 NP_213466.1 CDS aq_678 NC_000918.1 461021 461599 R hypothetical protein complement(461021..461599) Aquifex aeolicus VF5 1193968 NP_213467.1 CDS atpA NC_000918.1 461663 463174 D produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 461663..463174 Aquifex aeolicus VF5 1193969 NP_213468.1 CDS arsA1 NC_000918.1 463190 464380 R anion transporting ATPase complement(463190..464380) Aquifex aeolicus VF5 1193970 NP_213469.1 CDS aq_684 NC_000918.1 464435 465184 D hypothetical protein 464435..465184 Aquifex aeolicus VF5 1193971 NP_213470.1 CDS arsC NC_000918.1 465181 465615 D arsenate reductase 465181..465615 Aquifex aeolicus VF5 1193972 NP_213471.1 CDS uvrA NC_000918.1 465627 468407 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A 465627..468407 Aquifex aeolicus VF5 1193973 NP_213472.1 CDS aq_689 NC_000918.1 468404 469414 R hypothetical protein complement(468404..469414) Aquifex aeolicus VF5 1193974 NP_213473.1 CDS gidA2 NC_000918.1 469427 470764 R TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine; tRNA (uracil-5-)-methyltransferase Gid complement(469427..470764) Aquifex aeolicus VF5 1193975 NP_213474.1 CDS kpsU NC_000918.1 470797 471501 D CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase 470797..471501 Aquifex aeolicus VF5 1193976 NP_213475.1 CDS aq_693 NC_000918.1 471539 472783 R hypothetical protein complement(471539..472783) Aquifex aeolicus VF5 1193977 NP_213476.1 CDS acrD1 NC_000918.1 472894 476142 R AcrB/AcrD/AcrF family cation efflux protein complement(472894..476142) Aquifex aeolicus VF5 1193978 NP_213477.1 CDS acrE NC_000918.1 476147 477271 R acriflavin resistance protein AcrE complement(476147..477271) Aquifex aeolicus VF5 1193979 NP_213478.1 CDS aq_699 NC_000918.1 477268 478581 R hypothetical protein complement(477268..478581) Aquifex aeolicus VF5 1193980 NP_213479.1 CDS aq_701 NC_000918.1 478635 479876 R hypothetical protein complement(478635..479876) Aquifex aeolicus VF5 1193981 NP_213480.1 CDS merR NC_000918.1 479863 480273 R MerR family transcriptional regulator complement(479863..480273) Aquifex aeolicus VF5 1193982 NP_213481.1 CDS dnaJ2 NC_000918.1 480279 481409 R chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone DnaJ complement(480279..481409) Aquifex aeolicus VF5 1193370 NP_213482.1 CDS truB NC_000918.1 481480 482343 R tRNA pseudouridine 55 synthase complement(481480..482343) Aquifex aeolicus VF5 1193371 NP_213483.1 CDS trpB1 NC_000918.1 482374 483567 D catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 482374..483567 Aquifex aeolicus VF5 1193372 NP_213484.1 CDS aq_707 NC_000918.1 483583 484644 D hypothetical protein 483583..484644 Aquifex aeolicus VF5 1193373 NP_213485.1 CDS hyuA NC_000918.1 484648 486630 D N-methylhydantoinase A 484648..486630 Aquifex aeolicus VF5 1193374 NP_213486.1 CDS nucI NC_000918.1 486617 487135 R thermococcal nuclease-like protein complement(486617..487135) Aquifex aeolicus VF5 1193375 NP_213487.1 CDS aq_711 NC_000918.1 487132 487647 R hypothetical protein complement(487132..487647) Aquifex aeolicus VF5 1193376 NP_213488.1 CDS frr NC_000918.1 487644 488198 R ribosome recycling factor complement(487644..488198) Aquifex aeolicus VF5 1193377 NP_213489.1 CDS pyrH NC_000918.1 488204 488926 R Catalyzes the phosphorylation of UMP to UDP; uridylate kinase complement(488204..488926) Aquifex aeolicus VF5 1193378 NP_213490.1 CDS tsf NC_000918.1 488926 489798 R EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts complement(488926..489798) Aquifex aeolicus VF5 1193379 NP_213491.1 CDS aq_716 NC_000918.1 489875 491269 R hypothetical protein complement(489875..491269) Aquifex aeolicus VF5 1193380 NP_213492.1 CDS glgP NC_000918.1 491380 493458 D glycogen phosphorylase 491380..493458 Aquifex aeolicus VF5 1193381 NP_213493.1 CDS mpg NC_000918.1 493455 495950 D mannose-1-phosphate guanyltransferase 493455..495950 Aquifex aeolicus VF5 1193382 NP_213494.1 CDS aq_720 NC_000918.1 495947 497380 D hypothetical protein 495947..497380 Aquifex aeolicus VF5 1193383 NP_213495.1 CDS glgA NC_000918.1 497377 498768 D glycogen synthase 497377..498768 Aquifex aeolicus VF5 1193384 NP_213496.1 CDS glgB NC_000918.1 498743 500635 D catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching enzyme 498743..500635 Aquifex aeolicus VF5 1193385 NP_213497.1 CDS malM NC_000918.1 500632 502089 D 4-alpha-glucanotransferase 500632..502089 Aquifex aeolicus VF5 1193386 NP_213498.1 CDS ctrA1 NC_000918.1 502101 504608 D cation transporter E1-E2 family ATPase 502101..504608 Aquifex aeolicus VF5 1193387 NP_213499.1 CDS ldhA NC_000918.1 504614 505618 D D-lactate dehydrogenase 504614..505618 Aquifex aeolicus VF5 1193388 NP_213500.1 CDS speC NC_000918.1 505654 506826 D ornithine decarboxylase 505654..506826 Aquifex aeolicus VF5 1193389 NP_213501.1 CDS aq_729 NC_000918.1 506732 507745 D hypothetical protein 506732..507745 Aquifex aeolicus VF5 1193390 NP_213502.1 CDS ccdA NC_000918.1 507757 508590 D cytochrome C-type biogenesis protein 507757..508590 Aquifex aeolicus VF5 1193391 NP_213503.1 CDS hisH NC_000918.1 508590 509213 D with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 508590..509213 Aquifex aeolicus VF5 1193392 NP_213504.1 CDS rpsG2 NC_000918.1 509203 509685 R binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 complement(509203..509685) Aquifex aeolicus VF5 1193393 NP_213505.1 CDS rpsL NC_000918.1 509689 510075 R interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 complement(509689..510075) Aquifex aeolicus VF5 1193394 NP_213506.1 CDS lpdA NC_000918.1 510161 511558 D dihydrolipoamide dehydrogenase 510161..511558 Aquifex aeolicus VF5 1193395 NP_213507.1 CDS aq_737 NC_000918.1 511622 512716 D hypothetical protein 511622..512716 Aquifex aeolicus VF5 1193396 NP_213508.1 CDS nifS2 NC_000918.1 512737 513957 D FeS cluster formation protein NifS 512737..513957 Aquifex aeolicus VF5 1193397 NP_213509.1 CDS aq_740 NC_000918.1 513969 515030 D hypothetical protein 513969..515030 Aquifex aeolicus VF5 1193398 NP_213510.1 CDS purD NC_000918.1 515011 516285 R catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase complement(515011..516285) Aquifex aeolicus VF5 1193399 NP_213511.1 CDS pilT NC_000918.1 516321 517421 D twitching motility protein PilT 516321..517421 Aquifex aeolicus VF5 1193400 NP_213512.1 CDS pilC1 NC_000918.1 517421 518647 D fimbrial assembly protein PilC 517421..518647 Aquifex aeolicus VF5 1193401 NP_213513.1 CDS ispA NC_000918.1 518640 519428 R geranylgeranyl pyrophosphate synthase complement(518640..519428) Aquifex aeolicus VF5 1193402 NP_213514.1 CDS truA NC_000918.1 519442 520167 R pseudouridine synthase I complement(519442..520167) Aquifex aeolicus VF5 1193403 NP_213515.1 CDS pgi NC_000918.1 520160 521122 R catalyzes the reversible isomerization of glucose 6-phosphate to fructose 6-phosphate; bifunctional phosphoglucose/phosphomannose isomerase complement(520160..521122) Aquifex aeolicus VF5 1193404 NP_213516.1 CDS aq_752 NC_000918.1 521156 523126 R hypothetical protein complement(521156..523126) Aquifex aeolicus VF5 1193405 NP_213517.1 CDS aq_754 NC_000918.1 523123 523422 R hypothetical protein complement(523123..523422) Aquifex aeolicus VF5 1193406 NP_213518.1 CDS aq_755 NC_000918.1 523415 524143 R hypothetical protein complement(523415..524143) Aquifex aeolicus VF5 1193407 NP_213519.1 CDS aq_756 NC_000918.1 524140 524829 R hypothetical protein complement(524140..524829) Aquifex aeolicus VF5 1193408 NP_213520.1 CDS aq_757 NC_000918.1 524822 525361 R hypothetical protein complement(524822..525361) Aquifex aeolicus VF5 1193409 NP_213521.1 CDS aq_758 NC_000918.1 525358 525855 R hypothetical protein complement(525358..525855) Aquifex aeolicus VF5 1193410 NP_213522.1 CDS aq_759 NC_000918.1 525855 526304 R GimC subunit alpha; protein folding pathway ATP-independent; forms a heterohexamer of alpha(2)beta(4); prefoldin subunit alpha complement(525855..526304) Aquifex aeolicus VF5 1193411 NP_213523.1 CDS gidA1 NC_000918.1 526457 528310 D GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 526457..528310 Aquifex aeolicus VF5 1193412 NP_213524.1 CDS genX NC_000918.1 528310 529191 D lysine--tRNA ligase beta chain; poxA; class II aminoacyl tRNA synthetase; catalyzes a two-step reaction; first charging a lysine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; lysyl-tRNA synthetase 528310..529191 Aquifex aeolicus VF5 1193413 NP_213525.1 CDS iclR NC_000918.1 529169 529942 R IclR family transcriptional regulator complement(529169..529942) Aquifex aeolicus VF5 1193414 NP_213526.1 CDS aq_765 NC_000918.1 529976 531418 D hypothetical protein 529976..531418 Aquifex aeolicus VF5 1193415 NP_213527.1 CDS aq_766 NC_000918.1 531396 532250 D hypothetical protein 531396..532250 Aquifex aeolicus VF5 1193416 NP_213528.1 CDS aq_768 NC_000918.1 532257 532823 D hypothetical protein 532257..532823 Aquifex aeolicus VF5 1193417 NP_213529.1 CDS purM NC_000918.1 532826 533821 D catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 532826..533821 Aquifex aeolicus VF5 1193418 NP_213532.1 CDS tly NC_000918.1 534837 535613 D hemolysin 534837..535613 Aquifex aeolicus VF5 1193421 NP_213533.1 CDS aq_775 NC_000918.1 535610 536590 D hypothetical protein 535610..536590 Aquifex aeolicus VF5 1193422 NP_213534.1 CDS nadB NC_000918.1 536587 538119 R L-aspartate oxidase complement(536587..538119) Aquifex aeolicus VF5 1193423 NP_213535.1 CDS aq_778 NC_000918.1 538097 539083 R hypothetical protein complement(538097..539083) Aquifex aeolicus VF5 1193424 NP_213536.1 CDS aq_780 NC_000918.1 539080 539592 R hypothetical protein complement(539080..539592) Aquifex aeolicus VF5 1193425 NP_213537.1 CDS hisD NC_000918.1 539585 540865 R histidinol dehydrogenase complement(539585..540865) Aquifex aeolicus VF5 1193426 NP_213538.1 CDS acrD4 NC_000918.1 541304 544306 R AcrB/AcrD/AcrF family cation efflux protein complement(541304..544306) Aquifex aeolicus VF5 1193427 NP_213539.1 CDS aq_788 NC_000918.1 544376 545545 D hypothetical protein 544376..545545 Aquifex aeolicus VF5 1193428 NP_213540.1 CDS aq_789 NC_000918.1 545563 546648 D hypothetical protein 545563..546648 Aquifex aeolicus VF5 1193429 NP_213541.1 CDS aq_791 NC_000918.1 546645 547136 D hypothetical protein 546645..547136 Aquifex aeolicus VF5 1193430 NP_213542.1 CDS cycB1 NC_000918.1 547161 547661 D cytochrome C552 547161..547661 Aquifex aeolicus VF5 1193431 NP_213543.1 CDS rpmI NC_000918.1 547720 547923 D 50S ribosomal protein L35 547720..547923 Aquifex aeolicus VF5 1193432 NP_213544.1 CDS rep NC_000918.1 547898 549907 R ATP-dependent DNA helicase REP complement(547898..549907) Aquifex aeolicus VF5 1193433 NP_213545.1 CDS aq_796 NC_000918.1 549949 550347 D hypothetical protein 549949..550347 Aquifex aeolicus VF5 1193434 NP_213546.1 CDS prc NC_000918.1 550344 551570 D carboxyl-terminal protease 550344..551570 Aquifex aeolicus VF5 1193435 NP_213547.1 CDS gcp NC_000918.1 551567 552574 D in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease 551567..552574 Aquifex aeolicus VF5 1193436 NP_213548.1 CDS mbhS3 NC_000918.1 552695 553549 D hydrogenase small subunit 552695..553549 Aquifex aeolicus VF5 1193437 NP_213549.1 CDS mbhL3 NC_000918.1 553539 554789 D hydrogenase large subunit 553539..554789 Aquifex aeolicus VF5 1193438 NP_213550.1 CDS aq_805 NC_000918.1 554790 555257 R hypothetical protein complement(554790..555257) Aquifex aeolicus VF5 1193439 NP_213551.1 CDS pyrC NC_000918.1 555261 556529 R catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase complement(555261..556529) Aquifex aeolicus VF5 1193440 NP_213552.1 CDS aq_808 NC_000918.1 556543 557457 R hypothetical protein complement(556543..557457) Aquifex aeolicus VF5 1193441 NP_213553.1 CDS aq_809 NC_000918.1 557454 558272 R hypothetical protein complement(557454..558272) Aquifex aeolicus VF5 1193442 NP_213554.1 CDS aq_811 NC_000918.1 558269 558718 R hypothetical protein complement(558269..558718) Aquifex aeolicus VF5 1193443 NP_213555.1 CDS aq_812 NC_000918.1 558785 559891 D hypothetical protein 558785..559891 Aquifex aeolicus VF5 1193444 NP_213556.1 CDS acpS NC_000918.1 559888 560256 R holo-ACP synthase complement(559888..560256) Aquifex aeolicus VF5 1193445 NP_213557.1 CDS aq_814 NC_000918.1 560253 561119 R hypothetical protein complement(560253..561119) Aquifex aeolicus VF5 1193446 NP_213558.1 CDS dfp NC_000918.1 561119 562285 R pantothenate metabolism flavoprotein complement(561119..562285) Aquifex aeolicus VF5 1193447 NP_213559.1 CDS gsa NC_000918.1 562310 563584 D glutamate-1-semialdehyde aminotransferase 562310..563584 Aquifex aeolicus VF5 1193448 NP_213560.1 CDS aq_818 NC_000918.1 563588 564562 D hypothetical protein 563588..564562 Aquifex aeolicus VF5 1193449 NP_213561.1 CDS lnt NC_000918.1 564520 565839 D apolipoprotein N-acyltransferase 564520..565839 Aquifex aeolicus VF5 1193450 NP_213562.1 CDS aq_820 NC_000918.1 565822 566418 R hypothetical protein complement(565822..566418) Aquifex aeolicus VF5 1193451 NP_213563.1 CDS murF NC_000918.1 566408 567745 R UDP-MurNAc-pentapeptide sythetase complement(566408..567745) Aquifex aeolicus VF5 1193452 NP_213564.1 CDS exsB NC_000918.1 573050 573706 D trans-regulatory protein ExsB 573050..573706 Aquifex aeolicus VF5 1193453 NP_213565.1 CDS surE NC_000918.1 573689 574444 R catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE complement(573689..574444) Aquifex aeolicus VF5 1193454 NP_213566.1 CDS flgA NC_000918.1 574448 575119 R flagellar protein FlgA complement(574448..575119) Aquifex aeolicus VF5 1193455 NP_213567.1 CDS flgG2 NC_000918.1 575049 575837 R flagellar hook basal-body protein FlgG complement(575049..575837) Aquifex aeolicus VF5 1193456 NP_213568.1 CDS nox NC_000918.1 575881 577305 D NADH oxidase 575881..577305 Aquifex aeolicus VF5 1193457 NP_213569.1 CDS aq_836 NC_000918.1 577262 577960 R hypothetical protein complement(577262..577960) Aquifex aeolicus VF5 1193458 NP_213570.1 CDS ilvD NC_000918.1 578040 579707 D catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 578040..579707 Aquifex aeolicus VF5 1193459 NP_213571.1 CDS trm1 NC_000918.1 579704 580882 R Dimethylates a single guanine residue of a number of tRNAs using S-adenosyl-L-methionine as a methyl group donor; N(2),N(2)-dimethylguanosine tRNA methyltransferase complement(579704..580882) Aquifex aeolicus VF5 1193460 NP_213572.1 CDS aq_843 NC_000918.1 580901 581302 D hypothetical protein 580901..581302 Aquifex aeolicus VF5 1193461 NP_213573.1 CDS spoT NC_000918.1 581303 583393 R (p)ppGpp 3-pyrophosphohydrolase complement(581303..583393) Aquifex aeolicus VF5 1193554 NP_213574.1 CDS mreB NC_000918.1 583431 584456 D rod shape-determining protein MreB 583431..584456 Aquifex aeolicus VF5 1193555 NP_213575.1 CDS aq_847 NC_000918.1 584453 585247 D in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 584453..585247 Aquifex aeolicus VF5 1193556 NP_213576.1 CDS aq_848 NC_000918.1 585510 585842 D hypothetical protein 585510..585842 Aquifex aeolicus VF5 1193557 NP_213577.1 CDS aq_849 NC_000918.1 586081 587379 R hypothetical protein complement(586081..587379) Aquifex aeolicus VF5 1193558 NP_213578.1 CDS aq_850 NC_000918.1 587390 587806 R hypothetical protein complement(587390..587806) Aquifex aeolicus VF5 1193559 NP_213579.1 CDS corA NC_000918.1 587797 588756 R Mg(2+) and Co(2+) transport protein complement(587797..588756) Aquifex aeolicus VF5 1193560 NP_213580.1 CDS pdxA NC_000918.1 588743 589705 R pyridoxal phosphate biosynthetic protein PdxA complement(588743..589705) Aquifex aeolicus VF5 1193561 NP_213581.1 CDS aq_853 NC_000918.1 589698 590042 R hypothetical protein complement(589698..590042) Aquifex aeolicus VF5 1193562 NP_213582.1 CDS aq_854 NC_000918.1 590053 591690 R hypothetical protein complement(590053..591690) Aquifex aeolicus VF5 1193563 NP_213583.1 CDS aq_855 NC_000918.1 591687 592580 R hypothetical protein complement(591687..592580) Aquifex aeolicus VF5 1193564 NP_213584.1 CDS purN NC_000918.1 592596 593246 D phosphoribosylglycinamide formyltransferase 592596..593246 Aquifex aeolicus VF5 1193565 NP_213585.1 CDS ahpC2 NC_000918.1 593526 594194 R alkyl hydroperoxide reductase complement(593526..594194) Aquifex aeolicus VF5 1193566 NP_213586.1 CDS aq_862 NC_000918.1 594616 594945 R hypothetical protein complement(594616..594945) Aquifex aeolicus VF5 1193567 NP_213587.1 CDS aq_863 NC_000918.1 594938 597961 R hypothetical protein complement(594938..597961) Aquifex aeolicus VF5 1193568 NP_213588.1 CDS nuoL2 NC_000918.1 597975 600338 R NADH dehydrogenase I subunit L complement(597975..600338) Aquifex aeolicus VF5 1193569 NP_213589.1 CDS rpsU NC_000918.1 600393 600596 R a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 complement(600393..600596) Aquifex aeolicus VF5 1193570 NP_213590.1 CDS nadC NC_000918.1 600882 601706 R quinolinate phosphoribosyl transferase complement(600882..601706) Aquifex aeolicus VF5 1193571 NP_213591.1 CDS trmE NC_000918.1 601852 603198 D in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 601852..603198 Aquifex aeolicus VF5 1193572 NP_213592.1 CDS rho NC_000918.1 603214 604524 D An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 603214..604524 Aquifex aeolicus VF5 1193573 NP_213593.1 CDS rpmE NC_000918.1 604575 604781 D 50S ribosomal protein L31 604575..604781 Aquifex aeolicus VF5 1194009 NP_213594.1 CDS prfA NC_000918.1 604785 605873 D recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 604785..605873 Aquifex aeolicus VF5 1193574 NP_213595.1 CDS minD2 NC_000918.1 606111 606899 R septum site-determining protein MinD complement(606111..606899) Aquifex aeolicus VF5 1193575 NP_213596.1 CDS minC NC_000918.1 606878 607483 R septum site-determining protein MinC complement(606878..607483) Aquifex aeolicus VF5 1193576 NP_213597.1 CDS aq_880 NC_000918.1 607507 608085 D hypothetical protein 607507..608085 Aquifex aeolicus VF5 1193577 NP_213598.1 CDS aq_881 NC_000918.1 608082 609968 R catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase complement(608082..609968) Aquifex aeolicus VF5 1193578 NP_213599.1 CDS topG2 NC_000918.1 610406 613846 R catalyzes the magnesium and ATP-dependent positive supercoiling of DNA; contains helicase and topoisomerase domains; reverse gyrase complement(610406..613846) Aquifex aeolicus VF5 1193579 NP_213600.1 CDS aq_888 NC_000918.1 613977 614423 D hypothetical protein 613977..614423 Aquifex aeolicus VF5 1193580 NP_213601.1 CDS aq_890 NC_000918.1 614467 615270 D hypothetical protein 614467..615270 Aquifex aeolicus VF5 1193581 NP_213602.1 CDS ppx NC_000918.1 615250 616188 R exopolyphosphatase complement(615250..616188) Aquifex aeolicus VF5 1193582 NP_213603.1 CDS fabD NC_000918.1 616148 617128 D malonyl-CoA:ACP transacylase 616148..617128 Aquifex aeolicus VF5 1193583 NP_213604.1 CDS aq_893 NC_000918.1 617125 617976 D hypothetical protein 617125..617976 Aquifex aeolicus VF5 1193584 NP_213605.1 CDS queA NC_000918.1 617965 618969 R Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine:tRNA ribosyltransferase-isomerase complement(617965..618969) Aquifex aeolicus VF5 1193585 NP_213606.1 CDS ispB NC_000918.1 618982 619896 R octoprenyl-diphosphate synthase complement(618982..619896) Aquifex aeolicus VF5 1193586 NP_213607.1 CDS nifU NC_000918.1 620083 620556 D NifU protein 620083..620556 Aquifex aeolicus VF5 1193587 NP_213611.1 CDS aroE NC_000918.1 622364 623173 D shikimate 5-dehydrogenase 622364..623173 Aquifex aeolicus VF5 1193591 NP_213612.1 CDS aq_903 NC_000918.1 623166 623621 D hypothetical protein 623166..623621 Aquifex aeolicus VF5 1193592 NP_213613.1 CDS aq_904 NC_000918.1 623622 624131 D hypothetical protein 623622..624131 Aquifex aeolicus VF5 1193593 NP_213614.1 CDS hksP3 NC_000918.1 624284 625825 R histidine kinase sensor protein complement(624284..625825) Aquifex aeolicus VF5 1193594 NP_213615.1 CDS phoU NC_000918.1 625818 626483 R PhoU family transcriptional regulator complement(625818..626483) Aquifex aeolicus VF5 1193595 NP_213616.1 CDS gmhA NC_000918.1 626498 627073 D catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate; phosphoheptose isomerase 626498..627073 Aquifex aeolicus VF5 1193596 NP_213617.1 CDS aq_909 NC_000918.1 627058 627882 D hypothetical protein 627058..627882 Aquifex aeolicus VF5 1193597 NP_213618.1 CDS dnaC NC_000918.1 627868 628575 R DNA replication protein DnaC complement(627868..628575) Aquifex aeolicus VF5 1193598 NP_213619.1 CDS ebs NC_000918.1 628608 629369 R erythrocyte band 7-like protein complement(628608..629369) Aquifex aeolicus VF5 1193599 NP_213620.1 CDS aq_913 NC_000918.1 629378 630031 R hypothetical protein complement(629378..630031) Aquifex aeolicus VF5 1193600 NP_213621.1 CDS aq_914 NC_000918.1 630065 630421 D hypothetical protein 630065..630421 Aquifex aeolicus VF5 1193601 NP_213622.1 CDS aq_915 NC_000918.1 630432 631238 D An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 630432..631238 Aquifex aeolicus VF5 1193602 NP_213623.1 CDS dapB NC_000918.1 631526 632323 D catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 631526..632323 Aquifex aeolicus VF5 1193603 NP_213624.1 CDS aq_917 NC_000918.1 632293 633519 R hypothetical protein complement(632293..633519) Aquifex aeolicus VF5 1193604 NP_213625.1 CDS aq_918 NC_000918.1 633516 633977 R hypothetical protein complement(633516..633977) Aquifex aeolicus VF5 1193605 NP_213626.1 CDS aq_919 NC_000918.1 633962 634441 D hypothetical protein 633962..634441 Aquifex aeolicus VF5 1193606 NP_213627.1 CDS fdx1 NC_000918.1 634438 634728 R ferredoxin complement(634438..634728) Aquifex aeolicus VF5 1193607 NP_213628.1 CDS ftsY NC_000918.1 634779 636164 R cell division protein FtsY complement(634779..636164) Aquifex aeolicus VF5 1193608 NP_213629.1 CDS aq_922 NC_000918.1 636198 637814 R hypothetical protein complement(636198..637814) Aquifex aeolicus VF5 1193609 NP_213630.1 CDS argS NC_000918.1 637841 639592 D arginyl-tRNA synthetase 637841..639592 Aquifex aeolicus VF5 1193610 NP_213631.1 CDS rph NC_000918.1 639612 640379 D RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH 639612..640379 Aquifex aeolicus VF5 1193611 NP_213632.1 CDS aq_926 NC_000918.1 640337 641095 D hypothetical protein 640337..641095 Aquifex aeolicus VF5 1193612 NP_213633.1 CDS aq_928 NC_000918.1 641141 641731 D hypothetical protein 641141..641731 Aquifex aeolicus VF5 1193613 NP_213634.1 CDS napA2 NC_000918.1 641743 642969 D Na(+)/H(+) antiporter 641743..642969 Aquifex aeolicus VF5 1193614 NP_213635.1 CDS aq_931 NC_000918.1 643202 643591 D NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 643202..643591 Aquifex aeolicus VF5 1193615 NP_213636.1 CDS dnaQ NC_000918.1 643713 644321 R DNA polymerase III subunit epsilon complement(643713..644321) Aquifex aeolicus VF5 1193616 NP_213637.1 CDS purS NC_000918.1 644296 644529 R phosphoribosylformylglycinamidine (FGAM) synthase subunit PurS complement(644296..644529) Aquifex aeolicus VF5 1194006 NP_213638.1 CDS aq_933 NC_000918.1 644552 645313 R hypothetical protein complement(644552..645313) Aquifex aeolicus VF5 1193617 NP_213639.1 CDS aq_935 NC_000918.1 645310 645783 R hypothetical protein complement(645310..645783) Aquifex aeolicus VF5 1193618 NP_213640.1 CDS ftsH NC_000918.1 645833 647737 D cell division protein FtsH 645833..647737 Aquifex aeolicus VF5 1193619 NP_213641.1 CDS leuC NC_000918.1 647737 649035 D catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; 3-isopropylmalate dehydratase large subunit 647737..649035 Aquifex aeolicus VF5 1193620 NP_213642.1 CDS aq_943 NC_000918.1 650221 650544 D hypothetical protein 650221..650544 Aquifex aeolicus VF5 1193621 NP_213643.1 CDS gcsH3 NC_000918.1 650617 651102 D part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H 650617..651102 Aquifex aeolicus VF5 1193622 NP_213644.1 CDS glyQ NC_000918.1 651393 652250 D glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 651393..652250 Aquifex aeolicus VF5 1193623 NP_213645.1 CDS rnc NC_000918.1 652228 652893 D RNase III 652228..652893 Aquifex aeolicus VF5 1193624 NP_213646.1 CDS hemH NC_000918.1 652890 653819 D protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 652890..653819 Aquifex aeolicus VF5 1193625 NP_213647.1 CDS aq_950 NC_000918.1 654176 654538 D hypothetical protein 654176..654538 Aquifex aeolicus VF5 1193626 NP_213648.1 CDS pheA NC_000918.1 654542 655630 R chorismate mutase/prephenate dehydratase complement(654542..655630) Aquifex aeolicus VF5 1193627 NP_213649.1 CDS rplT NC_000918.1 655685 656041 D binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 655685..656041 Aquifex aeolicus VF5 1193628 NP_213650.1 CDS pheS NC_000918.1 656041 657057 D catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 656041..657057 Aquifex aeolicus VF5 1193629 NP_213651.1 CDS lepB NC_000918.1 657066 657836 D type-I signal peptidase 657066..657836 Aquifex aeolicus VF5 1193630 NP_213652.1 CDS aq_957 NC_000918.1 657836 658306 D hypothetical protein 657836..658306 Aquifex aeolicus VF5 1193631 NP_213653.1 CDS pgsA2 NC_000918.1 658313 659230 D phosphotidylglycerophosphate synthase 658313..659230 Aquifex aeolicus VF5 1193632 NP_213654.1 CDS nadE NC_000918.1 658796 660499 R NH(3)-dependent; catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase complement(658796..660499) Aquifex aeolicus VF5 1193633 NP_213655.1 CDS mbhL2 NC_000918.1 660510 662204 R hydrogenase large subunit complement(660510..662204) Aquifex aeolicus VF5 1193634 NP_213656.1 CDS hdrD NC_000918.1 662201 663505 R heterodisulfide reductase complement(662201..663505) Aquifex aeolicus VF5 1193635 NP_213657.1 CDS aq_963 NC_000918.1 663518 664198 R hypothetical protein complement(663518..664198) Aquifex aeolicus VF5 1193636 NP_213658.1 CDS mbhS2 NC_000918.1 664198 665247 R hydrogenase small subunit complement(664198..665247) Aquifex aeolicus VF5 1193637 NP_213660.1 CDS ostA NC_000918.1 666538 668499 D organic solvent tolerance protein 666538..668499 Aquifex aeolicus VF5 1193639 NP_213661.1 CDS cbbE2 NC_000918.1 668496 669164 R ribulose-5-phosphate 3-epimerase complement(668496..669164) Aquifex aeolicus VF5 1193640 NP_213662.1 CDS tmk NC_000918.1 669174 669761 D thymidylate kinase 669174..669761 Aquifex aeolicus VF5 1193641 NP_213663.1 CDS argJ NC_000918.1 669738 670877 R bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase complement(669738..670877) Aquifex aeolicus VF5 1193642 NP_213664.1 CDS aq_972 NC_000918.1 670887 672164 R hypothetical protein complement(670887..672164) Aquifex aeolicus VF5 1193643 NP_213665.1 CDS secD NC_000918.1 672190 673695 D protein export membrane protein SecD 672190..673695 Aquifex aeolicus VF5 1193644 NP_213666.1 CDS cphA2 NC_000918.1 673738 674661 D beta lactamase 673738..674661 Aquifex aeolicus VF5 1193645 NP_213667.1 CDS bioB NC_000918.1 674673 675671 D biotin synthetase 674673..675671 Aquifex aeolicus VF5 1193738 NP_213668.1 CDS aq_977 NC_000918.1 675750 676754 D hypothetical protein 675750..676754 Aquifex aeolicus VF5 1193739 NP_213669.1 CDS aq_978 NC_000918.1 676751 677188 D hypothetical protein 676751..677188 Aquifex aeolicus VF5 1193740 NP_213670.1 CDS aq_979 NC_000918.1 677185 677787 R hypothetical protein complement(677185..677787) Aquifex aeolicus VF5 1193741 NP_213671.1 CDS gyrA NC_000918.1 677905 680139 D DNA gyrase A subunit 677905..680139 Aquifex aeolicus VF5 1193742 NP_213672.1 CDS aq_983 NC_000918.1 680212 681090 D hypothetical protein 680212..681090 Aquifex aeolicus VF5 1193743 NP_213673.1 CDS aq_985 NC_000918.1 681087 682298 R hypothetical protein complement(681087..682298) Aquifex aeolicus VF5 1193744 NP_213674.1 CDS aq_986 NC_000918.1 682302 682805 R hypothetical protein complement(682302..682805) Aquifex aeolicus VF5 1193745 NP_213675.1 CDS aq_987 NC_000918.1 682778 683275 R hypothetical protein complement(682778..683275) Aquifex aeolicus VF5 1193746 NP_213676.1 CDS aq_988 NC_000918.1 683288 683881 R hypothetical protein complement(683288..683881) Aquifex aeolicus VF5 1193747 NP_213677.1 CDS aq_990 NC_000918.1 683881 684636 R hypothetical protein complement(683881..684636) Aquifex aeolicus VF5 1193748 NP_213678.1 CDS trpS NC_000918.1 684685 685872 D catalyzes a two-step reaction; first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 684685..685872 Aquifex aeolicus VF5 1193749 NP_213679.1 CDS aq_993 NC_000918.1 685872 686903 D hypothetical protein 685872..686903 Aquifex aeolicus VF5 1193750 NP_213680.1 CDS pncA NC_000918.1 686941 687537 D pyrazinamidase/nicotinamidase 686941..687537 Aquifex aeolicus VF5 1193751 NP_213681.1 CDS dnaK NC_000918.1 687606 689504 D heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 687606..689504 Aquifex aeolicus VF5 1193752 NP_213682.1 CDS fadD NC_000918.1 689521 691992 R long-chain-fatty-acid CoA ligase complement(689521..691992) Aquifex aeolicus VF5 1193753 NP_213683.1 CDS motB2 NC_000918.1 692496 693170 R flagellar motor protein MotB-like complement(692496..693170) Aquifex aeolicus VF5 1193754 NP_213684.1 CDS motB1 NC_000918.1 693181 693888 R flagellar motor protein MotB complement(693181..693888) Aquifex aeolicus VF5 1193755 NP_213685.1 CDS motA NC_000918.1 693892 694656 R flagellar motor protein MotA complement(693892..694656) Aquifex aeolicus VF5 1193756 NP_213686.1 CDS cutA NC_000918.1 694699 695013 D periplasmic divalent cation tolerance protein 694699..695013 Aquifex aeolicus VF5 1193757 NP_213687.1 CDS aq_1006 NC_000918.1 695010 697946 D hypothetical protein 695010..697946 Aquifex aeolicus VF5 1193758 NP_213688.1 CDS dnaE NC_000918.1 697943 701428 R DNA polymerase III subunit alpha complement(697943..701428) Aquifex aeolicus VF5 1193759 NP_213689.1 CDS udh NC_000918.1 701440 702204 R dehydrogenase complement(701440..702204) Aquifex aeolicus VF5 1193760 NP_213690.1 CDS aq_1012 NC_000918.1 702179 702643 D hypothetical protein 702179..702643 Aquifex aeolicus VF5 1193761 NP_213691.1 CDS aq_1013 NC_000918.1 702655 703965 D hypothetical protein 702655..703965 Aquifex aeolicus VF5 1193762 NP_213692.1 CDS col NC_000918.1 703949 705178 R collagenase complement(703949..705178) Aquifex aeolicus VF5 1193763 NP_213693.1 CDS aq_1017 NC_000918.1 705255 705662 D hypothetical protein 705255..705662 Aquifex aeolicus VF5 1193764 NP_213694.1 CDS aq_1018 NC_000918.1 705653 706033 D hypothetical protein 705653..706033 Aquifex aeolicus VF5 1193765 NP_213695.1 CDS hypE NC_000918.1 706456 707454 D hydrogenase expression/formation protein 706456..707454 Aquifex aeolicus VF5 1193766 NP_213696.1 CDS hypA NC_000918.1 707454 707801 D hydrogenase accessory protein HypA 707454..707801 Aquifex aeolicus VF5 1193767 NP_213697.1 CDS aq_1022 NC_000918.1 707801 708835 D hypothetical protein 707801..708835 Aquifex aeolicus VF5 1193768 NP_213698.1 CDS acuC1 NC_000918.1 708832 709959 R acetoin utilization protein complement(708832..709959) Aquifex aeolicus VF5 1193769 NP_213699.1 CDS aq_1024 NC_000918.1 709946 710791 R hypothetical protein complement(709946..710791) Aquifex aeolicus VF5 1193770 NP_213700.1 CDS gyrB NC_000918.1 710781 713159 R gyrase B complement(710781..713159) Aquifex aeolicus VF5 1193771 NP_213701.1 CDS aq_1029 NC_000918.1 713175 713570 R hypothetical protein complement(713175..713570) Aquifex aeolicus VF5 1193772 NP_213702.1 CDS selD NC_000918.1 713839 714774 R selenophosphate synthase complement(713839..714774) Aquifex aeolicus VF5 1193773 NP_213703.1 CDS selA NC_000918.1 714928 716286 R catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis; selenocysteine synthase complement(714928..716286) Aquifex aeolicus VF5 1193774 NP_213704.1 CDS selB NC_000918.1 716314 718062 D elongation factor SelB 716314..718062 Aquifex aeolicus VF5 1193775 NP_213707.1 CDS aq_1037 NC_000918.1 719238 719681 R hypothetical protein complement(719238..719681) Aquifex aeolicus VF5 1193778 NP_213708.1 CDS lysR2 NC_000918.1 719732 720652 D LysR family transcriptional regulator 719732..720652 Aquifex aeolicus VF5 1193779 NP_213709.1 CDS fdoG NC_000918.1 720865 723912 D formate dehydrogenase subunit alpha 720865..723912 Aquifex aeolicus VF5 1193780 NP_213710.1 CDS fdoH NC_000918.1 723927 724838 D formate dehydrogenase subunit beta 723927..724838 Aquifex aeolicus VF5 1193781 NP_213711.1 CDS fdoI NC_000918.1 724841 725476 D formate dehydrogenase subunit gamma 724841..725476 Aquifex aeolicus VF5 1193782 NP_213712.1 CDS sodC1 NC_000918.1 725496 726005 D superoxide dismutase (Cu/Zn) 725496..726005 Aquifex aeolicus VF5 1193783 NP_213713.1 CDS fdhE NC_000918.1 725987 726838 D formate dehydrogenase formation protein FdhE 725987..726838 Aquifex aeolicus VF5 1193784 NP_213714.1 CDS gcsH1 NC_000918.1 726937 727368 D glycine cleavage system protein H 726937..727368 Aquifex aeolicus VF5 1193785 NP_213715.1 CDS nifS1 NC_000918.1 727480 728592 D FeS cluster formation protein NifS 727480..728592 Aquifex aeolicus VF5 1193786 NP_213716.1 CDS aq_1054 NC_000918.1 728999 729784 D hypothetical protein 728999..729784 Aquifex aeolicus VF5 1193787 NP_213717.1 CDS pstB NC_000918.1 729781 730554 R phosphate transport ATP binding protein complement(729781..730554) Aquifex aeolicus VF5 1193788 NP_213718.1 CDS aq_1056 NC_000918.1 730704 731984 D catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 730704..731984 Aquifex aeolicus VF5 1193789 NP_213719.1 CDS aq_1057 NC_000918.1 731970 732470 R hypothetical protein complement(731970..732470) Aquifex aeolicus VF5 1193790 NP_213720.1 CDS acrR1 NC_000918.1 732523 733062 D TetR/AcrR family transcriptional regulator 732523..733062 Aquifex aeolicus VF5 1193791 NP_213721.1 CDS aq_1059 NC_000918.1 733053 734306 D hypothetical protein 733053..734306 Aquifex aeolicus VF5 1193792 NP_213722.1 CDS aq_1060 NC_000918.1 734303 735427 D hypothetical protein 734303..735427 Aquifex aeolicus VF5 1193793 NP_213723.1 CDS emrB NC_000918.1 735424 736959 D major facilitator family transporter 735424..736959 Aquifex aeolicus VF5 1193794 NP_213724.1 CDS gap NC_000918.1 736956 737984 R glyceraldehyde-3-phosphate dehydrogenase complement(736956..737984) Aquifex aeolicus VF5 1193795 NP_213725.1 CDS miaA NC_000918.1 738025 738942 D IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 738025..738942 Aquifex aeolicus VF5 1193796 YP_008920731.1 CDS aq_1067a NC_000918.1 739492 739749 D nitrogen-fixing protein NifU 739492..739749 Aquifex aeolicus VF5 17925350 NP_213726.1 CDS cysS NC_000918.1 739746 741233 R catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase complement(739746..741233) Aquifex aeolicus VF5 1193797 NP_213727.1 CDS galE NC_000918.1 741238 742221 R UDP-glucose-4-epimerase complement(741238..742221) Aquifex aeolicus VF5 1193798 NP_213728.1 CDS aq_1070 NC_000918.1 742238 742948 D hypothetical protein 742238..742948 Aquifex aeolicus VF5 1193799 NP_213729.1 CDS proA NC_000918.1 742979 744310 D Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 742979..744310 Aquifex aeolicus VF5 1193800 NP_213730.1 CDS aq_1072 NC_000918.1 744320 744754 D hypothetical protein 744320..744754 Aquifex aeolicus VF5 1193801 NP_213731.1 CDS czcD NC_000918.1 744788 745714 D cation efflux system CzcD-like protein 744788..745714 Aquifex aeolicus VF5 1193802 NP_213732.1 CDS aq_1075 NC_000918.1 745729 746226 D hypothetical protein 745729..746226 Aquifex aeolicus VF5 1193803 NP_213733.1 CDS rhdA1 NC_000918.1 746226 747140 D thiosulfate sulfurtransferase 746226..747140 Aquifex aeolicus VF5 1193804 NP_213734.1 CDS aq_1078 NC_000918.1 747481 748146 D hypothetical protein 747481..748146 Aquifex aeolicus VF5 1193805 NP_213735.1 CDS aq_1079 NC_000918.1 748376 749626 D hypothetical protein 748376..749626 Aquifex aeolicus VF5 1193806 NP_213736.1 CDS aq_1080 NC_000918.1 749630 752287 D hypothetical protein 749630..752287 Aquifex aeolicus VF5 1193807 NP_213737.1 CDS cysD NC_000918.1 752277 753917 R in Rhizobium meliloti this protein is involved in the synthesis of nodulation factors that are active on the roots of alfalfa; catalyzes formation of activated sulfate intermediate; converts ATP and sulfate to diphosphate and adenylylsulfate and then ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; the activated intermediate is transferred to the nodulation factors by NodH; may interact with NodP and NodQ; similar to the CysD and CysN proteins from Escherichia coli involved in cysteine biosynthesis; bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein complement(752277..753917) Aquifex aeolicus VF5 1193808 NP_213738.1 CDS rfbD NC_000918.1 754007 755044 D GDP-D-mannose dehydratase 754007..755044 Aquifex aeolicus VF5 1193809 NP_213739.1 CDS aq_1084 NC_000918.1 755047 755415 R hypothetical protein complement(755047..755415) Aquifex aeolicus VF5 1193810 NP_213740.1 CDS aq_1085 NC_000918.1 756060 757469 R hypothetical protein complement(756060..757469) Aquifex aeolicus VF5 1193811 NP_213741.1 CDS aq_1088 NC_000918.1 757481 759766 R hypothetical protein complement(757481..759766) Aquifex aeolicus VF5 1193812 NP_213742.1 CDS hylA NC_000918.1 759811 761007 R hemolysin complement(759811..761007) Aquifex aeolicus VF5 1193813 NP_213743.1 CDS aq_1093 NC_000918.1 761152 762429 D hypothetical protein 761152..762429 Aquifex aeolicus VF5 1193814 NP_213744.1 CDS abcT4 NC_000918.1 762407 763597 R ABC transporter complement(762407..763597) Aquifex aeolicus VF5 1193815 NP_213745.1 CDS abcT3 NC_000918.1 763594 764364 R ABC transporter complement(763594..764364) Aquifex aeolicus VF5 1193816 NP_213746.1 CDS mtfA NC_000918.1 764571 766337 R mannosyltransferase A complement(764571..766337) Aquifex aeolicus VF5 1193817 NP_213747.1 CDS abcT5 NC_000918.1 766601 768295 D ABC transporter 766601..768295 Aquifex aeolicus VF5 1193818 NP_213748.1 CDS fabH NC_000918.1 768292 769221 R FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase complement(768292..769221) Aquifex aeolicus VF5 1193819 NP_213749.1 CDS plsX NC_000918.1 769222 770235 R involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase complement(769222..770235) Aquifex aeolicus VF5 1193820 NP_213750.1 CDS rpmF NC_000918.1 770235 770426 R some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 complement(770235..770426) Aquifex aeolicus VF5 1193821 NP_213751.1 CDS aq_1103 NC_000918.1 770426 770950 R hypothetical protein complement(770426..770950) Aquifex aeolicus VF5 1193822 NP_213752.1 CDS aq_1104 NC_000918.1 770996 772048 D hypothetical protein 770996..772048 Aquifex aeolicus VF5 1193823 NP_213753.1 CDS purQ NC_000918.1 772057 772740 D catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase I 772057..772740 Aquifex aeolicus VF5 1193824 NP_213754.1 CDS aq_1106 NC_000918.1 772733 773836 D hypothetical protein 772733..773836 Aquifex aeolicus VF5 1193825 NP_213755.1 CDS moaD NC_000918.1 773849 774085 D molybdopterin converting factor, small subunit 773849..774085 Aquifex aeolicus VF5 1194007 NP_213756.1 CDS gcsH4 NC_000918.1 774106 774621 D glycine cleavage system protein H 774106..774621 Aquifex aeolicus VF5 1193826 NP_213757.1 CDS gcsP2 NC_000918.1 774618 775937 D acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 2 to form the P protein; glycine dehydrogenase subunit 1 774618..775937 Aquifex aeolicus VF5 1193827 NP_213758.1 CDS aq_1110 NC_000918.1 775923 776378 R hypothetical protein complement(775923..776378) Aquifex aeolicus VF5 1193828 NP_213759.1 CDS aq_1111 NC_000918.1 776595 777260 D hypothetical protein 776595..777260 Aquifex aeolicus VF5 1193829 NP_213760.1 CDS aq_1113 NC_000918.1 777271 778230 D hypothetical protein 777271..778230 Aquifex aeolicus VF5 1192542 NP_213761.1 CDS hksP1 NC_000918.1 778227 780167 D histidine kinase sensor protein 778227..780167 Aquifex aeolicus VF5 1192543 NP_213762.1 CDS ntrC1 NC_000918.1 780148 781467 D NtrC family transcriptional regulator 780148..781467 Aquifex aeolicus VF5 1192544 NP_213763.1 CDS aq_1119 NC_000918.1 781521 782078 D hypothetical protein 781521..782078 Aquifex aeolicus VF5 1192545 NP_213764.1 CDS aq_1120 NC_000918.1 782351 782854 D hypothetical protein 782351..782854 Aquifex aeolicus VF5 1192546 NP_213765.1 CDS aq_1121 NC_000918.1 782895 783701 D hypothetical protein 782895..783701 Aquifex aeolicus VF5 1192547 NP_213766.1 CDS acrD2 NC_000918.1 783682 786834 R AcrB/AcrD/AcrF family cation efflux protein complement(783682..786834) Aquifex aeolicus VF5 1192548 NP_213767.1 CDS ctrA3 NC_000918.1 786841 788835 R cation transporter E1-E2 family ATPase complement(786841..788835) Aquifex aeolicus VF5 1192549 NP_213768.1 CDS aq_1127 NC_000918.1 788837 789205 R hypothetical protein complement(788837..789205) Aquifex aeolicus VF5 1192550 NP_213769.1 CDS aq_1129 NC_000918.1 789211 789579 R hypothetical protein complement(789211..789579) Aquifex aeolicus VF5 1192551 NP_213770.1 CDS sufI NC_000918.1 789593 791176 R periplasmic cell division protein SufI complement(789593..791176) Aquifex aeolicus VF5 1192552 NP_213771.1 CDS czcB1 NC_000918.1 791189 792523 R cation efflux system CzcB-like protein complement(791189..792523) Aquifex aeolicus VF5 1192553 NP_213772.1 CDS aq_1133 NC_000918.1 792520 793698 R hypothetical protein complement(792520..793698) Aquifex aeolicus VF5 1192554 NP_213773.1 CDS proB NC_000918.1 793767 794837 R catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase complement(793767..794837) Aquifex aeolicus VF5 1192555 NP_213774.1 CDS aq_1137 NC_000918.1 794867 795739 D hypothetical protein 794867..795739 Aquifex aeolicus VF5 1192556 NP_213775.1 CDS rpiB NC_000918.1 795750 796214 D ribose 5-phosphate isomerase B 795750..796214 Aquifex aeolicus VF5 1192557 NP_213776.1 CDS ftsW NC_000918.1 796183 797529 D cell division protein FtsW 796183..797529 Aquifex aeolicus VF5 1192558 NP_213777.1 CDS argG NC_000918.1 797533 798738 D catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 797533..798738 Aquifex aeolicus VF5 1192559 NP_213778.1 CDS aq_1141 NC_000918.1 798771 799841 D hypothetical protein 798771..799841 Aquifex aeolicus VF5 1192560 NP_213779.1 CDS aq_1142 NC_000918.1 799806 800855 R hypothetical protein complement(799806..800855) Aquifex aeolicus VF5 1192561 NP_213780.1 CDS dapA NC_000918.1 800897 801781 D catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 800897..801781 Aquifex aeolicus VF5 1192562 NP_213781.1 CDS pabB NC_000918.1 801764 802810 R p-aminobenzoate synthetase complement(801764..802810) Aquifex aeolicus VF5 1192563 NP_213782.1 CDS dhaT NC_000918.1 802807 803970 R 1,3 propanediol dehydrogenase complement(802807..803970) Aquifex aeolicus VF5 1192564 NP_213783.1 CDS aq_1148 NC_000918.1 803996 805384 R hypothetical protein complement(803996..805384) Aquifex aeolicus VF5 1192565 NP_213784.1 CDS aq_1151 NC_000918.1 805785 808229 R hypothetical protein complement(805785..808229) Aquifex aeolicus VF5 1192566 NP_213785.1 CDS lysC NC_000918.1 808278 809525 R aspartokinase complement(808278..809525) Aquifex aeolicus VF5 1192567 NP_213786.1 CDS metK NC_000918.1 809561 810691 D methionine adenosyltransferase; catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 809561..810691 Aquifex aeolicus VF5 1192568 NP_213787.1 CDS hisS2 NC_000918.1 810680 811831 R histidyl-tRNA synthetase complement(810680..811831) Aquifex aeolicus VF5 1192569 NP_213788.1 CDS hoxX NC_000918.1 811828 813516 R hydrogenase regulation HoxX complement(811828..813516) Aquifex aeolicus VF5 1192570 NP_213789.1 CDS hypD NC_000918.1 813529 814671 R hydrogenase expression/formation protein HypD complement(813529..814671) Aquifex aeolicus VF5 1192571 NP_213790.1 CDS topG1 NC_000918.1 814948 818481 D catalyzes the magnesium and ATP-dependent positive supercoiling of DNA; contains helicase and topoisomerase domains; reverse gyrase 814948..818481 Aquifex aeolicus VF5 1192572 NP_213791.1 CDS aq_1163 NC_000918.1 818518 818895 D hypothetical protein 818518..818895 Aquifex aeolicus VF5 1192573 NP_213792.1 CDS aq_1166 NC_000918.1 819009 819743 D hypothetical protein 819009..819743 Aquifex aeolicus VF5 1192574 NP_213793.1 CDS forA2 NC_000918.1 819763 820932 D ferredoxin oxidoreductase subunit alpha 819763..820932 Aquifex aeolicus VF5 1192575 NP_213794.1 CDS forB2 NC_000918.1 820956 821825 D ferredoxin oxidoreductase subunit beta 820956..821825 Aquifex aeolicus VF5 1192576 NP_213795.1 CDS forG2 NC_000918.1 821822 822514 D ferredoxin oxidoreductase subunit gamma 821822..822514 Aquifex aeolicus VF5 1192577 NP_213796.1 CDS fdx2 NC_000918.1 822528 822764 D ferredoxin 822528..822764 Aquifex aeolicus VF5 1192578 NP_213797.1 CDS carB1 NC_000918.1 823159 824772 D carbamoyl-phosphate synthase large subunit 823159..824772 Aquifex aeolicus VF5 1192579 NP_213798.1 CDS aq_1173 NC_000918.1 824888 825337 D hypothetical protein 824888..825337 Aquifex aeolicus VF5 1192580 NP_213799.1 CDS rlpA2 NC_000918.1 825286 825966 D rare lipoprotein A 825286..825966 Aquifex aeolicus VF5 1192581 NP_213800.1 CDS purF NC_000918.1 825994 827391 D amidophosphoribosyltransferase 825994..827391 Aquifex aeolicus VF5 1192582 NP_213801.1 CDS aq_1176 NC_000918.1 827458 827793 D hypothetical protein 827458..827793 Aquifex aeolicus VF5 1192583 NP_213802.1 CDS murG NC_000918.1 827782 828816 R UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; UDPdiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase complement(827782..828816) Aquifex aeolicus VF5 1192584 NP_213803.1 CDS purE NC_000918.1 828841 829344 D phosphoribosylaminoimidazole carboxylase 828841..829344 Aquifex aeolicus VF5 1192585 NP_213804.1 CDS sahH NC_000918.1 829334 830590 D catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase 829334..830590 Aquifex aeolicus VF5 1192586 NP_213805.1 CDS fliF NC_000918.1 830595 832064 R flagellar M-ring protein complement(830595..832064) Aquifex aeolicus VF5 1192587 NP_213806.1 CDS fliE NC_000918.1 832066 832347 R flagellar hook-basal body protein complement(832066..832347) Aquifex aeolicus VF5 1192588 NP_213807.1 CDS flgC NC_000918.1 832338 832742 R flagellar biosynthesis FlgC complement(832338..832742) Aquifex aeolicus VF5 1192589 NP_213808.1 CDS flgB NC_000918.1 832739 833113 R flagellar basal body rod protein FlgB complement(832739..833113) Aquifex aeolicus VF5 1192590 NP_213809.1 CDS aq_1185 NC_000918.1 833114 834901 R hypothetical protein complement(833114..834901) Aquifex aeolicus VF5 1192591 NP_213810.1 CDS aq_1186 NC_000918.1 834837 836057 R hypothetical protein complement(834837..836057) Aquifex aeolicus VF5 1192592 NP_213811.1 CDS aq_1187 NC_000918.1 836072 836575 R hypothetical protein complement(836072..836575) Aquifex aeolicus VF5 1192593 NP_213812.1 CDS aq_1188 NC_000918.1 836624 837091 D hypothetical protein 836624..837091 Aquifex aeolicus VF5 1192594 NP_213813.1 CDS pbpA1 NC_000918.1 837078 838865 D penicillin binding protein 2 837078..838865 Aquifex aeolicus VF5 1192595 NP_213814.1 CDS aq_1191 NC_000918.1 838862 839845 R hypothetical protein complement(838862..839845) Aquifex aeolicus VF5 1192596 NP_213815.1 CDS fdx3 NC_000918.1 839920 840159 D ferredoxin 839920..840159 Aquifex aeolicus VF5 1192597 NP_213816.1 CDS aq_1192 NC_000918.1 840172 840741 D hypothetical protein 840172..840741 Aquifex aeolicus VF5 1192598 NP_213817.1 CDS aq_1194 NC_000918.1 840741 841283 D hypothetical protein 840741..841283 Aquifex aeolicus VF5 1192599 NP_213818.1 CDS forA1 NC_000918.1 841295 842509 D ferredoxin oxidoreductase subunit alpha 841295..842509 Aquifex aeolicus VF5 1192600 NP_213819.1 CDS forB1 NC_000918.1 842499 843359 D ferredoxin oxidoreductase subunit beta 842499..843359 Aquifex aeolicus VF5 1192601 NP_213820.1 CDS forG1 NC_000918.1 843356 844081 D ferredoxin oxidoreductase subunit gamma 843356..844081 Aquifex aeolicus VF5 1192602 NP_213821.1 CDS aq_1201 NC_000918.1 844484 844822 R hypothetical protein complement(844484..844822) Aquifex aeolicus VF5 1192603 NP_213822.1 CDS lysS NC_000918.1 844743 846536 D class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 844743..846536 Aquifex aeolicus VF5 1192604 NP_213823.1 CDS thiC NC_000918.1 846533 847906 R required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC complement(846533..847906) Aquifex aeolicus VF5 1192605 NP_213824.1 CDS accA NC_000918.1 847969 848940 D acetyl-CoA carboxylase subunit alpha 847969..848940 Aquifex aeolicus VF5 1192606 NP_213825.1 CDS furR1 NC_000918.1 848924 849358 R FUR family transcriptional regulator complement(848924..849358) Aquifex aeolicus VF5 1192607 NP_213826.1 CDS lysA NC_000918.1 849405 850667 R diaminopimelate decarboxylase complement(849405..850667) Aquifex aeolicus VF5 1192608 NP_213827.1 CDS aq_1210 NC_000918.1 850689 851423 R hypothetical protein complement(850689..851423) Aquifex aeolicus VF5 1192609 NP_213828.1 CDS aq_1211 NC_000918.1 851461 852072 D hypothetical protein 851461..852072 Aquifex aeolicus VF5 1192610 NP_213829.1 CDS flhA NC_000918.1 852069 854105 D flagellar export protein 852069..854105 Aquifex aeolicus VF5 1192611 NP_213830.1 CDS flhF NC_000918.1 854095 855216 D flagellar biosynthesis FlhF 854095..855216 Aquifex aeolicus VF5 1192612 NP_213831.1 CDS minD1 NC_000918.1 855179 856015 D septum site-determining protein MinD 855179..856015 Aquifex aeolicus VF5 1192613 NP_213832.1 CDS fliA NC_000918.1 856012 856722 D RNA polymerase sigma factor FliA 856012..856722 Aquifex aeolicus VF5 1192614 NP_213833.1 CDS aq_1219 NC_000918.1 856709 857266 R hypothetical protein complement(856709..857266) Aquifex aeolicus VF5 1192615 NP_213834.1 CDS aq_1220 NC_000918.1 857305 858804 R hypothetical protein complement(857305..858804) Aquifex aeolicus VF5 1192616 NP_213835.1 CDS gltX NC_000918.1 859084 860505 D Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 859084..860505 Aquifex aeolicus VF5 1192617 NP_213836.1 CDS abcT1 NC_000918.1 860502 861191 D ABC transporter 860502..861191 Aquifex aeolicus VF5 1192618 NP_213837.1 CDS aq_1223 NC_000918.1 861188 861895 R hypothetical protein complement(861188..861895) Aquifex aeolicus VF5 1192619 NP_213838.1 CDS mnmA NC_000918.1 862048 863118 D catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 862048..863118 Aquifex aeolicus VF5 1192620 NP_213839.1 CDS aq_1226 NC_000918.1 863160 864362 D catalyzes the formation of S-adenosylmethionine from methionine and ATP; S-adenosylmethionine synthetase 863160..864362 Aquifex aeolicus VF5 1192621 NP_213840.1 CDS mffT2 NC_000918.1 864401 865579 D major facilitator transporter 864401..865579 Aquifex aeolicus VF5 1192622 NP_213841.1 CDS aq_1230 NC_000918.1 865609 866352 R hypothetical protein complement(865609..866352) Aquifex aeolicus VF5 1192623 NP_213842.1 CDS dmsC NC_000918.1 866714 867727 R dimethylsulfoxide reductase subunit C complement(866714..867727) Aquifex aeolicus VF5 1192624 NP_213843.1 CDS dmsB1 NC_000918.1 867743 868507 R DMSO reductase subunit B complement(867743..868507) Aquifex aeolicus VF5 1192625 NP_213844.1 CDS dmsA NC_000918.1 868520 871474 R dimethylsulfoxide reductase subunit A complement(868520..871474) Aquifex aeolicus VF5 1192626 NP_213845.1 CDS aq_1236 NC_000918.1 871498 872904 D hypothetical protein 871498..872904 Aquifex aeolicus VF5 1192627 NP_213846.1 CDS cysG NC_000918.1 873066 873629 D siroheme synthase 873066..873629 Aquifex aeolicus VF5 1192628 NP_213847.1 CDS aq_1238 NC_000918.1 873615 874163 R hypothetical protein complement(873615..874163) Aquifex aeolicus VF5 1192629 NP_213848.1 CDS aq_1239 NC_000918.1 874193 874528 R hypothetical protein complement(874193..874528) Aquifex aeolicus VF5 1192630 NP_213849.1 CDS adh2 NC_000918.1 874528 875253 R alcohol dehydrogenase complement(874528..875253) Aquifex aeolicus VF5 1192631 NP_213850.1 CDS aq_1241 NC_000918.1 875250 875702 R hypothetical protein complement(875250..875702) Aquifex aeolicus VF5 1192632 NP_213851.1 CDS mutS2 NC_000918.1 875699 877987 R DNA mismatch repair protein MutS complement(875699..877987) Aquifex aeolicus VF5 1192633 NP_213852.1 CDS aq_1244 NC_000918.1 877994 878617 R hypothetical protein complement(877994..878617) Aquifex aeolicus VF5 1192726 NP_213853.1 CDS ilvC NC_000918.1 878614 879615 R catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase complement(878614..879615) Aquifex aeolicus VF5 1192727 NP_213854.1 CDS aq_1247 NC_000918.1 879682 880335 D hypothetical protein 879682..880335 Aquifex aeolicus VF5 1192728 NP_213855.1 CDS aq_1248 NC_000918.1 880332 881027 D hypothetical protein 880332..881027 Aquifex aeolicus VF5 1192729 NP_213856.1 CDS cds NC_000918.1 880975 881754 D phosphatidate cytidylyltransferase 880975..881754 Aquifex aeolicus VF5 1192730 NP_213857.1 CDS aq_1250 NC_000918.1 881726 882241 D hypothetical protein 881726..882241 Aquifex aeolicus VF5 1192731 NP_213858.1 CDS aq_1253 NC_000918.1 882667 883122 R hypothetical protein complement(882667..883122) Aquifex aeolicus VF5 1192732 NP_213859.1 CDS aq_1254 NC_000918.1 883164 883472 D hypothetical protein 883164..883472 Aquifex aeolicus VF5 1192733 NP_213860.1 CDS feoB NC_000918.1 883469 885538 R ferrous iron transport protein B complement(883469..885538) Aquifex aeolicus VF5 1192734 NP_213861.1 CDS aq_1256 NC_000918.1 885548 886477 R hypothetical protein complement(885548..886477) Aquifex aeolicus VF5 1192735 NP_213862.1 CDS metG NC_000918.1 886771 888264 D methionyl-tRNA synthetase subunit alpha 886771..888264 Aquifex aeolicus VF5 1192736 NP_213863.1 CDS aq_1258 NC_000918.1 888261 889127 D hypothetical protein 888261..889127 Aquifex aeolicus VF5 1192737 NP_213864.1 CDS aq_1259 NC_000918.1 889204 890514 D hypothetical protein 889204..890514 Aquifex aeolicus VF5 1192738 NP_213865.1 CDS aq_1262 NC_000918.1 890580 892274 D hypothetical protein 890580..892274 Aquifex aeolicus VF5 1192739 NP_213866.1 CDS aq_1263 NC_000918.1 892238 892792 D hypothetical protein 892238..892792 Aquifex aeolicus VF5 1192740 NP_213867.1 CDS aq_1264 NC_000918.1 892789 893709 D hypothetical protein 892789..893709 Aquifex aeolicus VF5 1192741 NP_213868.1 CDS cstA NC_000918.1 893687 895354 R carbon starvation protein A complement(893687..895354) Aquifex aeolicus VF5 1192742 NP_213869.1 CDS aq_1267 NC_000918.1 895686 896408 D hypothetical protein 895686..896408 Aquifex aeolicus VF5 1192743 NP_213870.1 CDS hvsT NC_000918.1 896480 898297 D high affinity sulfate transporter 896480..898297 Aquifex aeolicus VF5 1192744 NP_213871.1 CDS aq_1270 NC_000918.1 898446 899048 D hypothetical protein 898446..899048 Aquifex aeolicus VF5 1192745 NP_213872.1 CDS mpp NC_000918.1 899259 900560 D processing protease 899259..900560 Aquifex aeolicus VF5 1192746 NP_213873.1 CDS aq_1272 NC_000918.1 900570 900899 R hypothetical protein complement(900570..900899) Aquifex aeolicus VF5 1192747 NP_213874.1 CDS aq_1273 NC_000918.1 900887 901807 R hypothetical protein complement(900887..901807) Aquifex aeolicus VF5 1192748 NP_213875.1 CDS cafA NC_000918.1 901756 903132 R cytoplasmic axial filament protein complement(901756..903132) Aquifex aeolicus VF5 1192749 NP_213876.1 CDS aq_1276 NC_000918.1 903044 903961 D hypothetical protein 903044..903961 Aquifex aeolicus VF5 1192750 NP_213877.1 CDS aq_1277 NC_000918.1 903946 904518 R hypothetical protein complement(903946..904518) Aquifex aeolicus VF5 1192751 NP_213878.1 CDS hemA NC_000918.1 904557 905777 D catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 904557..905777 Aquifex aeolicus VF5 1192752 NP_213879.1 CDS murA NC_000918.1 906163 907440 D adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 906163..907440 Aquifex aeolicus VF5 1192753 NP_213880.1 CDS hspC NC_000918.1 907490 907924 R small heat shock protein (class I) complement(907490..907924) Aquifex aeolicus VF5 1192754 NP_213881.1 CDS pilC2 NC_000918.1 907985 909169 R fimbrial assembly protein PilC2 complement(907985..909169) Aquifex aeolicus VF5 1192755 NP_213882.1 CDS aq_1286 NC_000918.1 909166 910011 R hypothetical protein complement(909166..910011) Aquifex aeolicus VF5 1192756 NP_213883.1 CDS aq_1287 NC_000918.1 910008 910667 R hypothetical protein complement(910008..910667) Aquifex aeolicus VF5 1192757 NP_213884.1 CDS gspD NC_000918.1 910633 912510 R general secretion pathway protein D complement(910633..912510) Aquifex aeolicus VF5 1192758 NP_213885.1 CDS purA NC_000918.1 912896 914194 R catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase complement(912896..914194) Aquifex aeolicus VF5 1192759 NP_213886.1 CDS aq_1292 NC_000918.1 914223 914759 R THEP1; Aquifex aeolicus protein exhibits ATPase and GTPase activity; crystal structure shows RecA-like fold; NTPase complement(914223..914759) Aquifex aeolicus VF5 1192760 NP_213887.1 CDS alaS NC_000918.1 914828 917431 D Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 914828..917431 Aquifex aeolicus VF5 1192761 NP_213888.1 CDS aq_1295 NC_000918.1 917436 917906 D hypothetical protein 917436..917906 Aquifex aeolicus VF5 1192762 NP_213889.1 CDS clpC NC_000918.1 918003 920435 D ATP-dependent Clp protease 918003..920435 Aquifex aeolicus VF5 1192763 NP_213890.1 CDS omp NC_000918.1 920473 922809 D outer membrane protein 920473..922809 Aquifex aeolicus VF5 1192764 NP_213891.1 CDS cspC NC_000918.1 922835 923047 R cold shock protein complement(922835..923047) Aquifex aeolicus VF5 1192765 NP_213892.1 CDS hisA NC_000918.1 923151 923867 R phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase complement(923151..923867) Aquifex aeolicus VF5 1192766 NP_213893.1 CDS pyrDB NC_000918.1 923864 924619 R dihydroorotate dehydrogenase electron transfer subunit complement(923864..924619) Aquifex aeolicus VF5 1192767 NP_213894.1 CDS sucC1 NC_000918.1 924687 925997 D succinyl-CoA ligase subunit beta 924687..925997 Aquifex aeolicus VF5 1192768 NP_213895.1 CDS tgt NC_000918.1 926031 927167 D Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 926031..927167 Aquifex aeolicus VF5 1192769 NP_213896.1 CDS thrB NC_000918.1 927151 928044 R homoserine kinase complement(927151..928044) Aquifex aeolicus VF5 1192770 NP_213897.1 CDS nuoA2 NC_000918.1 928429 928785 D NADH dehydrogenase I subunit A 928429..928785 Aquifex aeolicus VF5 1192771 NP_213898.1 CDS nuoB NC_000918.1 928798 929337 D The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 928798..929337 Aquifex aeolicus VF5 1192772 NP_213899.1 CDS nuoD2 NC_000918.1 929347 931107 D NADH dehydrogenase I subunit D 929347..931107 Aquifex aeolicus VF5 1192773 NP_213900.1 CDS nuoH1 NC_000918.1 931120 932130 D NADH dehydrogenase I subunit H 931120..932130 Aquifex aeolicus VF5 1192774 NP_213901.1 CDS nuoI1 NC_000918.1 932142 932747 D NADH dehydrogenase I subunit I 932142..932747 Aquifex aeolicus VF5 1192775 NP_213902.1 CDS nuoJ1 NC_000918.1 932735 933223 D NADH dehydrogenase I subunit J 932735..933223 Aquifex aeolicus VF5 1192776 NP_213903.1 CDS nuoK1 NC_000918.1 933233 933535 D NADH dehydrogenase I subunit K 933233..933535 Aquifex aeolicus VF5 1192777 NP_213904.1 CDS nuoL1 NC_000918.1 933532 935400 D NADH dehydrogenase I subunit L 933532..935400 Aquifex aeolicus VF5 1192778 NP_213905.1 CDS nuoM1 NC_000918.1 935400 936875 D NADH dehydrogenase I subunit M 935400..936875 Aquifex aeolicus VF5 1192779 NP_213906.1 CDS nuoN1 NC_000918.1 936880 938274 D NADH dehydrogenase I subunit N 936880..938274 Aquifex aeolicus VF5 1192780 NP_213907.1 CDS ispD NC_000918.1 938284 938925 D 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 938284..938925 Aquifex aeolicus VF5 1192781 NP_213908.1 CDS aq_1324 NC_000918.1 938922 939500 R hypothetical protein complement(938922..939500) Aquifex aeolicus VF5 1192782 NP_213909.1 CDS mobB NC_000918.1 939497 939925 R molybdopterin-guainine dinucleotide biosynthesis protein B complement(939497..939925) Aquifex aeolicus VF5 1192783 NP_213910.1 CDS aq_1327 NC_000918.1 939955 940638 D hypothetical protein 939955..940638 Aquifex aeolicus VF5 1192784 NP_213911.1 CDS aq_1328 NC_000918.1 940635 942929 R hypothetical protein complement(940635..942929) Aquifex aeolicus VF5 1192785 NP_213912.1 CDS moeB NC_000918.1 942990 943805 D molybdopterin biosynthesis protein MoeB 942990..943805 Aquifex aeolicus VF5 1192786 NP_213913.1 CDS gltP NC_000918.1 943806 945002 D proton/sodium-glutamate symport protein 943806..945002 Aquifex aeolicus VF5 1192787 NP_213914.1 CDS czcB2 NC_000918.1 945014 946060 D cation efflux system CzcB-like protein 945014..946060 Aquifex aeolicus VF5 1192788 NP_213915.1 CDS aq_1332 NC_000918.1 946057 947304 D hypothetical protein 946057..947304 Aquifex aeolicus VF5 1192789 NP_213916.1 CDS aq_1333 NC_000918.1 947293 948198 R hypothetical protein complement(947293..948198) Aquifex aeolicus VF5 1192790 NP_213917.1 CDS pyrG NC_000918.1 948474 950069 R CTP synthase; CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase complement(948474..950069) Aquifex aeolicus VF5 1192791 NP_213918.1 CDS nse NC_000918.1 950129 951094 D nucleotide sugar epimerase 950129..951094 Aquifex aeolicus VF5 1192792 NP_213919.1 CDS aq_1336 NC_000918.1 951091 952215 R hypothetical protein complement(951091..952215) Aquifex aeolicus VF5 1192793 NP_213920.1 CDS clpX NC_000918.1 952212 953450 R binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX complement(952212..953450) Aquifex aeolicus VF5 1192794 NP_213921.1 CDS clpP NC_000918.1 953470 954075 R ATP-dependent Clp protease proteolytic subunit complement(953470..954075) Aquifex aeolicus VF5 1192795 NP_213922.1 CDS tig NC_000918.1 954053 955489 R trigger factor complement(954053..955489) Aquifex aeolicus VF5 1192796 NP_213923.1 CDS gph NC_000918.1 955513 956154 R phosphoglycolate phosphatase complement(955513..956154) Aquifex aeolicus VF5 1192797 NP_213924.1 CDS aq_1343 NC_000918.1 956151 956633 R hypothetical protein complement(956151..956633) Aquifex aeolicus VF5 1192798 NP_213925.1 CDS aq_1345 NC_000918.1 957037 957741 D hypothetical protein 957037..957741 Aquifex aeolicus VF5 1192799 NP_213926.1 CDS aq_1347 NC_000918.1 957743 958273 D hypothetical protein 957743..958273 Aquifex aeolicus VF5 1192800 NP_213927.1 CDS aq_1348 NC_000918.1 958188 958757 D hypothetical protein 958188..958757 Aquifex aeolicus VF5 1192801 NP_213928.1 CDS aq_1349 NC_000918.1 958754 959560 D hypothetical protein 958754..959560 Aquifex aeolicus VF5 1192802 NP_213929.1 CDS aq_1350 NC_000918.1 959557 961038 D catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase 959557..961038 Aquifex aeolicus VF5 1192803 NP_213930.1 CDS phoH NC_000918.1 961064 962110 D phosphate starvation-inducible protein 961064..962110 Aquifex aeolicus VF5 1192804 NP_213931.1 CDS aq_1354 NC_000918.1 962034 962486 D hypothetical protein 962034..962486 Aquifex aeolicus VF5 1192805 NP_213932.1 CDS lipA NC_000918.1 962453 963283 R catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase complement(962453..963283) Aquifex aeolicus VF5 1192806 NP_213933.1 CDS aq_1356 NC_000918.1 963309 963743 D hypothetical protein 963309..963743 Aquifex aeolicus VF5 1192807 NP_213934.1 CDS cydA NC_000918.1 963860 965266 D cytochrome oxidase d subunit I 963860..965266 Aquifex aeolicus VF5 1192808 NP_213935.1 CDS cydB NC_000918.1 965268 966368 D cytochrome oxidase d subunit II 965268..966368 Aquifex aeolicus VF5 1192809 NP_213936.1 CDS aq_1359 NC_000918.1 966349 966894 R catalyzes the formation of N-acetyl-L-glutamate from acetyl-CoA and L-glutamate; acetyltransferase complement(966349..966894) Aquifex aeolicus VF5 1192810 NP_213937.1 CDS murC NC_000918.1 966852 968216 R UDP-N-acetylmuramate-alanine ligase complement(966852..968216) Aquifex aeolicus VF5 1192811 NP_213938.1 CDS adh1 NC_000918.1 968216 969247 R alcohol dehydrogenase complement(968216..969247) Aquifex aeolicus VF5 1192812 NP_213939.1 CDS accB NC_000918.1 969261 969725 R biotin carboxyl carrier protein complement(969261..969725) Aquifex aeolicus VF5 1192813 NP_213940.1 CDS efp NC_000918.1 969722 970300 R Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P complement(969722..970300) Aquifex aeolicus VF5 1192814 NP_213941.1 CDS aq_1365 NC_000918.1 970488 971987 D hypothetical protein 970488..971987 Aquifex aeolicus VF5 1192815 NP_213942.1 CDS thiE1 NC_000918.1 972096 972656 R thiamine phosphate synthase complement(972096..972656) Aquifex aeolicus VF5 1192816 NP_213943.1 CDS spsI NC_000918.1 972668 973954 R glucose-1-phosphate thymidylyltransferase complement(972668..973954) Aquifex aeolicus VF5 1192817 NP_213944.1 CDS tagD2 NC_000918.1 973969 974475 R glycerol-3-phosphate cytidyltransferase complement(973969..974475) Aquifex aeolicus VF5 1192910 NP_213945.1 CDS aq_1369 NC_000918.1 974450 975232 D hypothetical protein 974450..975232 Aquifex aeolicus VF5 1192911 NP_213946.1 CDS rlpA1 NC_000918.1 975229 975744 D rare lipoprotein A 975229..975744 Aquifex aeolicus VF5 1192912 NP_213947.1 CDS argH NC_000918.1 975755 977128 D catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 975755..977128 Aquifex aeolicus VF5 1192913 NP_213950.1 CDS nuoI2 NC_000918.1 978259 978885 D NADH dehydrogenase I subunit I 978259..978885 Aquifex aeolicus VF5 1192916 NP_213951.1 CDS nuoJ2 NC_000918.1 978882 979418 D NADH dehydrogenase I subunit J 978882..979418 Aquifex aeolicus VF5 1192917 NP_213952.1 CDS nuoK2 NC_000918.1 979399 979707 D NADH dehydrogenase I subunit K 979399..979707 Aquifex aeolicus VF5 1192918 NP_213953.1 CDS nuoL3 NC_000918.1 979710 981644 D NADH dehydrogenase I subunit L 979710..981644 Aquifex aeolicus VF5 1192919 NP_213954.1 CDS nuoM2 NC_000918.1 981656 983161 D NADH dehydrogenase I subunit M 981656..983161 Aquifex aeolicus VF5 1192920 NP_213955.1 CDS nuoN2 NC_000918.1 983175 984641 D NADH dehydrogenase I subunit N 983175..984641 Aquifex aeolicus VF5 1192921 NP_213956.1 CDS nuoA1 NC_000918.1 984638 985018 D NADH dehydrogenase I subunit A 984638..985018 Aquifex aeolicus VF5 1192922 NP_213957.1 CDS aq_1386 NC_000918.1 984987 985766 D hypothetical protein 984987..985766 Aquifex aeolicus VF5 1192923 NP_213958.1 CDS arsR NC_000918.1 985792 986100 D ArsR family transcriptional regulator 985792..986100 Aquifex aeolicus VF5 1192924 NP_213959.1 CDS aq_1388 NC_000918.1 986343 987302 D hypothetical protein 986343..987302 Aquifex aeolicus VF5 1192925 NP_213960.1 CDS fba NC_000918.1 987292 988224 R fructose-1,6-bisphosphate aldolase class II complement(987292..988224) Aquifex aeolicus VF5 1192926 NP_213961.1 CDS aq_1391 NC_000918.1 988669 989634 D hypothetical protein 988669..989634 Aquifex aeolicus VF5 1192927 NP_213962.1 CDS aq_1392 NC_000918.1 989839 990717 D hypothetical protein 989839..990717 Aquifex aeolicus VF5 1192928 NP_213963.1 CDS lig NC_000918.1 990701 992458 R catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA; ATP-dependent DNA ligase complement(990701..992458) Aquifex aeolicus VF5 1192929 NP_213964.2 CDS leuD NC_000918.1 992455 992955 R 3-isopropylmalate dehydratase complement(992455..992955) Aquifex aeolicus VF5 1192930 NP_213965.1 CDS aq_1400 NC_000918.1 993552 995600 D binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); cellulose synthase regulator protein 993552..995600 Aquifex aeolicus VF5 1192931 NP_213966.1 CDS celY NC_000918.1 995597 996574 D endoglucanase fragment 995597..996574 Aquifex aeolicus VF5 1192932 NP_213967.1 CDS aq_1402 NC_000918.1 996504 998516 D hypothetical protein 996504..998516 Aquifex aeolicus VF5 1192933 NP_213968.1 CDS aq_1403 NC_000918.1 998504 999496 D hypothetical protein 998504..999496 Aquifex aeolicus VF5 1192934 NP_213969.1 CDS aq_1404 NC_000918.1 999493 1000227 D hypothetical protein 999493..1000227 Aquifex aeolicus VF5 1192935 NP_213970.1 CDS aq_1405 NC_000918.1 1000217 1000894 R hypothetical protein complement(1000217..1000894) Aquifex aeolicus VF5 1192936 NP_213971.1 CDS bcsA NC_000918.1 1000870 1003149 R cellulose synthase catalytic subunit complement(1000870..1003149) Aquifex aeolicus VF5 1192937 NP_213972.1 CDS aq_1408 NC_000918.1 1003352 1004191 D hypothetical protein 1003352..1004191 Aquifex aeolicus VF5 1192938 NP_213973.1 CDS aq_1409 NC_000918.1 1004130 1004525 D hypothetical protein 1004130..1004525 Aquifex aeolicus VF5 1192939 NP_213974.1 CDS trpB2 NC_000918.1 1004522 1005826 R catalyzes the formation of L-tryptophan from indole and L-serine; tryptophan synthase subunit beta complement(1004522..1005826) Aquifex aeolicus VF5 1192940 NP_213975.1 CDS aq_1412 NC_000918.1 1005831 1006916 R hypothetical protein complement(1005831..1006916) Aquifex aeolicus VF5 1192941 NP_213976.1 CDS valS NC_000918.1 1006934 1010431 D valyl-tRNA synthetase 1006934..1010431 Aquifex aeolicus VF5 1192942 NP_213977.1 CDS furR2 NC_000918.1 1010435 1010893 R FUR family transcriptional regulator complement(1010435..1010893) Aquifex aeolicus VF5 1192943 NP_213978.1 CDS mobA NC_000918.1 1010900 1011505 R in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis; molybdopterin-guanine dinucleotide biosynthesis protein MobA complement(1010900..1011505) Aquifex aeolicus VF5 1192944 NP_213979.1 CDS aq_1420 NC_000918.1 1011429 1012328 R hypothetical protein complement(1011429..1012328) Aquifex aeolicus VF5 1192945 NP_213980.1 CDS aq_1421 NC_000918.1 1012351 1012944 D hypothetical protein 1012351..1012944 Aquifex aeolicus VF5 1192946 NP_213981.1 CDS dpbF NC_000918.1 1012941 1014686 R DNA polymerase beta family protein complement(1012941..1014686) Aquifex aeolicus VF5 1192947 NP_213982.1 CDS pdxJ NC_000918.1 1014723 1015451 D involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 1014723..1015451 Aquifex aeolicus VF5 1192948 NP_213983.1 CDS hemF NC_000918.1 1015431 1016543 R oxygen-independent coproporphyrinogen III oxidase complement(1015431..1016543) Aquifex aeolicus VF5 1192949 NP_213984.1 CDS aq_1426 NC_000918.1 1016582 1016884 D hypothetical protein 1016582..1016884 Aquifex aeolicus VF5 1192950 NP_213985.1 CDS lpxB NC_000918.1 1016881 1017951 D lipid A disaccharide synthetase 1016881..1017951 Aquifex aeolicus VF5 1192951 NP_213986.1 CDS aq_1428 NC_000918.1 1017961 1018590 D hypothetical protein 1017961..1018590 Aquifex aeolicus VF5 1192952 NP_213987.1 CDS metF NC_000918.1 1018582 1019472 R 5,10-methylenetetrahydrofolate reductase complement(1018582..1019472) Aquifex aeolicus VF5 1192953 NP_213988.1 CDS ppdD1 NC_000918.1 1019553 1019915 D pilin 1019553..1019915 Aquifex aeolicus VF5 1192954 NP_213989.1 CDS fimZ NC_000918.1 1019985 1020344 D minor pilin 1019985..1020344 Aquifex aeolicus VF5 1192955 NP_213990.1 CDS ppdD2 NC_000918.1 1020328 1020765 D pilin 1020328..1020765 Aquifex aeolicus VF5 1192956 NP_213991.1 CDS ppdD3 NC_000918.1 1020672 1021103 D pilin 1020672..1021103 Aquifex aeolicus VF5 1192957 NP_213992.1 CDS aq_1436 NC_000918.1 1021100 1021930 D hypothetical protein 1021100..1021930 Aquifex aeolicus VF5 1192958 NP_213993.1 CDS aq_1439 NC_000918.1 1021935 1023788 D hypothetical protein 1021935..1023788 Aquifex aeolicus VF5 1192959 NP_213994.1 CDS oppA NC_000918.1 1023795 1025549 D extracellular solute binding protein 1023795..1025549 Aquifex aeolicus VF5 1192960 NP_213995.1 CDS aq_1442 NC_000918.1 1025935 1029099 D hypothetical protein 1025935..1029099 Aquifex aeolicus VF5 1192961 NP_213996.1 CDS aq_1444 NC_000918.1 1029091 1029678 R hypothetical protein complement(1029091..1029678) Aquifex aeolicus VF5 1192962 NP_213997.1 CDS ctrA2 NC_000918.1 1029714 1031753 R cation transporter E1-E2 family ATPase complement(1029714..1031753) Aquifex aeolicus VF5 1192963 NP_213998.1 CDS aq_1446 NC_000918.1 1031810 1032367 R hypothetical protein complement(1031810..1032367) Aquifex aeolicus VF5 1192964 NP_213999.1 CDS aq_1447 NC_000918.1 1032379 1034499 R hypothetical protein complement(1032379..1034499) Aquifex aeolicus VF5 1192965 NP_214000.1 CDS mutT NC_000918.1 1034504 1034923 R 8-oxo-dGTPase domain-containing protein complement(1034504..1034923) Aquifex aeolicus VF5 1192966 NP_214001.1 CDS htrA NC_000918.1 1034952 1036313 D periplasmic serine protease 1034952..1036313 Aquifex aeolicus VF5 1192967 NP_214002.1 CDS rpoS NC_000918.1 1036324 1037256 D RNA polymerase sigma factor RpoS 1036324..1037256 Aquifex aeolicus VF5 1192968 NP_214003.1 CDS aq_1453 NC_000918.1 1037256 1038068 D hypothetical protein 1037256..1038068 Aquifex aeolicus VF5 1192969 NP_214004.1 CDS aq_1455 NC_000918.1 1038417 1039127 D hypothetical protein 1038417..1039127 Aquifex aeolicus VF5 1192970 NP_214005.1 CDS aq_1457 NC_000918.1 1038984 1039616 R hypothetical protein complement(1038984..1039616) Aquifex aeolicus VF5 1192971 NP_214007.1 CDS npr NC_000918.1 1040657 1042405 R neutral protease complement(1040657..1042405) Aquifex aeolicus VF5 1192973 NP_214008.1 CDS aq_1462 NC_000918.1 1042119 1043009 D hypothetical protein 1042119..1043009 Aquifex aeolicus VF5 1192974 NP_214009.1 CDS aq_1464 NC_000918.1 1043006 1043755 D hypothetical protein 1043006..1043755 Aquifex aeolicus VF5 1192975 NP_214010.1 CDS aq_1465 NC_000918.1 1043752 1044144 D hypothetical protein 1043752..1044144 Aquifex aeolicus VF5 1192976 NP_214011.1 CDS aq_1466 NC_000918.1 1044125 1044505 R hypothetical protein complement(1044125..1044505) Aquifex aeolicus VF5 1192977 NP_214012.1 CDS aq_1467 NC_000918.1 1044483 1045253 R hypothetical protein complement(1044483..1045253) Aquifex aeolicus VF5 1192978 NP_214013.1 CDS folP NC_000918.1 1045240 1046439 R dihydropteroate synthase complement(1045240..1046439) Aquifex aeolicus VF5 1192979 YP_008920732.1 CDS aq_1468a NC_000918.1 1046464 1046673 R hypothetical protein complement(1046464..1046673) Aquifex aeolicus VF5 17925351 NP_214014.1 CDS accC2 NC_000918.1 1047198 1048631 D biotin carboxylase 1047198..1048631 Aquifex aeolicus VF5 1192980 NP_214015.1 CDS dnaB NC_000918.1 1049037 1050443 D replicative DNA helicase 1049037..1050443 Aquifex aeolicus VF5 1192981 NP_214016.1 CDS aq_1473 NC_000918.1 1050573 1051361 D hypothetical protein 1050573..1051361 Aquifex aeolicus VF5 1192982 NP_214017.1 CDS gspE NC_000918.1 1051345 1052754 D general secretion pathway protein E 1051345..1052754 Aquifex aeolicus VF5 1192983 NP_214018.1 CDS aq_1476 NC_000918.1 1052751 1053293 D hypothetical protein 1052751..1053293 Aquifex aeolicus VF5 1192984 NP_214019.1 CDS aq_1477 NC_000918.1 1053274 1054095 D hypothetical protein 1053274..1054095 Aquifex aeolicus VF5 1192985 NP_214020.1 CDS recR NC_000918.1 1054026 1054661 R recombination protein RecR complement(1054026..1054661) Aquifex aeolicus VF5 1192986 NP_214021.1 CDS aq_1480 NC_000918.1 1054920 1055510 R hypothetical protein complement(1054920..1055510) Aquifex aeolicus VF5 1192987 NP_214022.1 CDS aq_1481 NC_000918.1 1055518 1056003 R hypothetical protein complement(1055518..1056003) Aquifex aeolicus VF5 1192988 NP_214023.1 CDS aq_1482 NC_000918.1 1056000 1056485 R hypothetical protein complement(1056000..1056485) Aquifex aeolicus VF5 1192989 NP_214024.1 CDS aq_1483 NC_000918.1 1056478 1057104 R hypothetical protein complement(1056478..1057104) Aquifex aeolicus VF5 1192990 NP_214025.1 CDS aq_1484 NC_000918.1 1057089 1057619 R hypothetical protein complement(1057089..1057619) Aquifex aeolicus VF5 1192991 NP_214026.1 CDS himA NC_000918.1 1057616 1057900 R DNA binding protein HU complement(1057616..1057900) Aquifex aeolicus VF5 1192992 NP_214027.1 CDS rpsA NC_000918.1 1057932 1059539 R ribosomal protein S01 complement(1057932..1059539) Aquifex aeolicus VF5 1192993 NP_214028.1 CDS trmD NC_000918.1 1059606 1060379 R tRNA guanine-N1 methyltransferase complement(1059606..1060379) Aquifex aeolicus VF5 1192994 NP_214029.1 CDS rpoD NC_000918.1 1060369 1062096 R RNA polymerase sigma factor RpoD complement(1060369..1062096) Aquifex aeolicus VF5 1192995 NP_214030.1 CDS dnaG NC_000918.1 1062135 1063631 R DNA primase complement(1062135..1063631) Aquifex aeolicus VF5 1192996 NP_214031.1 CDS aq_1494 NC_000918.1 1063698 1064084 D hypothetical protein 1063698..1064084 Aquifex aeolicus VF5 1192997 NP_214032.2 CDS ogt NC_000918.1 1064073 1064540 R O-6-methylguanine-DNA-alkyltransferase complement(1064073..1064540) Aquifex aeolicus VF5 1192998 NP_214033.1 CDS xylR NC_000918.1 1064736 1065596 R NagC/XylR family transcriptional regulator complement(1064736..1065596) Aquifex aeolicus VF5 1192999 NP_214034.1 CDS aq_1498 NC_000918.1 1065593 1065988 R hypothetical protein complement(1065593..1065988) Aquifex aeolicus VF5 1193000 NP_214035.1 CDS sodA NC_000918.1 1066291 1066932 D Fe/Mn family superoxide dismutase 1066291..1066932 Aquifex aeolicus VF5 1193001 NP_214036.1 CDS aq_1501 NC_000918.1 1066938 1067708 D hypothetical protein 1066938..1067708 Aquifex aeolicus VF5 1193094 NP_214037.1 CDS aq_1502 NC_000918.1 1067668 1068834 R hypothetical protein complement(1067668..1068834) Aquifex aeolicus VF5 1193095 NP_214038.1 CDS aq_1503 NC_000918.1 1068818 1069474 R hypothetical protein complement(1068818..1069474) Aquifex aeolicus VF5 1193096 NP_214039.1 CDS trk1 NC_000918.1 1069471 1070802 R K+ transport protein complement(1069471..1070802) Aquifex aeolicus VF5 1193097 NP_214040.1 CDS nrdF NC_000918.1 1070796 1072886 R ribonucleotide reductase subunit beta complement(1070796..1072886) Aquifex aeolicus VF5 1193098 NP_214041.1 CDS omt NC_000918.1 1072992 1073630 R O-methyltransferase complement(1072992..1073630) Aquifex aeolicus VF5 1193099 NP_214042.1 CDS aq_1508 NC_000918.1 1073611 1074489 R hypothetical protein complement(1073611..1074489) Aquifex aeolicus VF5 1193100 NP_214043.1 CDS oppC NC_000918.1 1074470 1075465 R oligopeptide transport system permease complement(1074470..1075465) Aquifex aeolicus VF5 1193101 NP_214044.1 CDS aq_1510 NC_000918.1 1075465 1076124 R hypothetical protein complement(1075465..1076124) Aquifex aeolicus VF5 1193102 NP_214045.1 CDS icd NC_000918.1 1076238 1077518 D isocitrate dehydrogenase 1076238..1077518 Aquifex aeolicus VF5 1193103 NP_214046.1 CDS aq_1515 NC_000918.1 1077544 1077960 D hypothetical protein 1077544..1077960 Aquifex aeolicus VF5 1193104 NP_214047.1 CDS aq_1516 NC_000918.1 1078019 1078513 D hypothetical protein 1078019..1078513 Aquifex aeolicus VF5 1193105 NP_214048.1 CDS pycB NC_000918.1 1078513 1079931 D pyruvate carboxylase N-terminal domain-containing protein 1078513..1079931 Aquifex aeolicus VF5 1193106 NP_214049.1 CDS pycA NC_000918.1 1079955 1081922 D catalyzes the formation of oxaloacetate from pyruvate; pyruvate carboxylase subunit B 1079955..1081922 Aquifex aeolicus VF5 1193107 NP_214050.1 CDS aq_1525 NC_000918.1 1081963 1082547 D hypothetical protein 1081963..1082547 Aquifex aeolicus VF5 1193108 NP_214051.1 CDS aq_1526 NC_000918.1 1082598 1083515 D hypothetical protein 1082598..1083515 Aquifex aeolicus VF5 1193109 NP_214052.1 CDS aq_1527 NC_000918.1 1083586 1084476 D hypothetical protein 1083586..1084476 Aquifex aeolicus VF5 1193110 NP_214053.1 CDS aq_1528 NC_000918.1 1084448 1085260 D hypothetical protein 1084448..1085260 Aquifex aeolicus VF5 1193111 NP_214054.1 CDS aq_1530 NC_000918.1 1085257 1086279 D hypothetical protein 1085257..1086279 Aquifex aeolicus VF5 1193112 NP_214055.1 CDS abcT10 NC_000918.1 1086276 1087019 D ABC transporter 1086276..1087019 Aquifex aeolicus VF5 1193113 NP_214056.1 CDS aq_1533 NC_000918.1 1087007 1087909 D hypothetical protein 1087007..1087909 Aquifex aeolicus VF5 1193114 NP_214057.1 CDS aq_1534 NC_000918.1 1087903 1088415 D hypothetical protein 1087903..1088415 Aquifex aeolicus VF5 1193115 NP_214058.1 CDS pepQ NC_000918.1 1088358 1089422 R xaa-pro dipeptidase complement(1088358..1089422) Aquifex aeolicus VF5 1193116 NP_214059.1 CDS aroA NC_000918.1 1089424 1090719 R catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase complement(1089424..1090719) Aquifex aeolicus VF5 1193117 NP_214060.1 CDS fliN NC_000918.1 1090757 1091095 R flagellar switch protein FliN complement(1090757..1091095) Aquifex aeolicus VF5 1193118 NP_214061.1 CDS ispG NC_000918.1 1091079 1092152 R catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase complement(1091079..1092152) Aquifex aeolicus VF5 1193119 NP_214062.1 CDS aq_1542 NC_000918.1 1092168 1092740 D hypothetical protein 1092168..1092740 Aquifex aeolicus VF5 1193120 NP_214063.1 CDS rfaC1 NC_000918.1 1092737 1093675 D ADP-heptose--LPS heptosyltransferase 1092737..1093675 Aquifex aeolicus VF5 1193121 NP_214064.1 CDS aq_1545 NC_000918.1 1093706 1095139 D hypothetical protein 1093706..1095139 Aquifex aeolicus VF5 1193122 NP_214065.1 CDS kpsF NC_000918.1 1095136 1096104 R polysialic acid capsule expression protein complement(1095136..1096104) Aquifex aeolicus VF5 1193123 NP_214066.1 CDS ppa NC_000918.1 1096105 1096641 R catalyzes the hydrolysis of pyrophosphate to phosphate; inorganic pyrophosphatase complement(1096105..1096641) Aquifex aeolicus VF5 1193124 NP_214067.1 CDS trpA NC_000918.1 1096848 1097636 R catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha complement(1096848..1097636) Aquifex aeolicus VF5 1193125 NP_214068.1 CDS aq_1549 NC_000918.1 1097624 1098022 R hypothetical protein complement(1097624..1098022) Aquifex aeolicus VF5 1193126 NP_214069.1 CDS cycB2 NC_000918.1 1098061 1098375 R cytochrome C552 complement(1098061..1098375) Aquifex aeolicus VF5 1193127 NP_214070.1 CDS fabI NC_000918.1 1098424 1099281 R enoyl-ACP reductase complement(1098424..1099281) Aquifex aeolicus VF5 1193128 NP_214071.1 CDS aq_1554 NC_000918.1 1099250 1100044 R catalyzes the reversible formation of fructose 1,6-bisphosphate from glycerone phosphate and D-glyceraldehyde 3-phosphate; fructose-bisphosphate aldolase complement(1099250..1100044) Aquifex aeolicus VF5 1193129 NP_214072.1 CDS cysM NC_000918.1 1100086 1101069 D cysteine synthase, O-acetylserine (thiol) lyase B 1100086..1101069 Aquifex aeolicus VF5 1193130 NP_214073.1 CDS aq_1558 NC_000918.1 1101097 1102194 D hypothetical protein 1101097..1102194 Aquifex aeolicus VF5 1193131 NP_214074.1 CDS mglA1 NC_000918.1 1102175 1102747 D gliding motility protein 1102175..1102747 Aquifex aeolicus VF5 1193132 NP_214075.1 CDS aq_1562 NC_000918.1 1102744 1104126 D hypothetical protein 1102744..1104126 Aquifex aeolicus VF5 1193133 NP_214076.1 CDS abcT13 NC_000918.1 1104123 1105787 D ABC transporter 1104123..1105787 Aquifex aeolicus VF5 1193134 NP_214077.1 CDS gltB NC_000918.1 1105818 1110299 D glutamate synthase 1105818..1110299 Aquifex aeolicus VF5 1193135 NP_214078.1 CDS aq_1569 NC_000918.1 1110269 1111405 D hypothetical protein 1110269..1111405 Aquifex aeolicus VF5 1193136 NP_214079.1 CDS aq_1570 NC_000918.1 1111294 1111680 D hypothetical protein 1111294..1111680 Aquifex aeolicus VF5 1193137 NP_214080.1 CDS aq_1571 NC_000918.1 1111685 1112365 D hypothetical protein 1111685..1112365 Aquifex aeolicus VF5 1193138 NP_214081.1 CDS aq_1574 NC_000918.1 1112362 1112805 R hypothetical protein complement(1112362..1112805) Aquifex aeolicus VF5 1193139 NP_214082.1 CDS aq_1575 NC_000918.1 1112819 1113568 D hypothetical protein 1112819..1113568 Aquifex aeolicus VF5 1193140 NP_214083.1 CDS mutL NC_000918.1 1113601 1114878 D DNA mismatch repair protein MutL 1113601..1114878 Aquifex aeolicus VF5 1193141 NP_214084.1 CDS iagB NC_000918.1 1114896 1115450 D invasion protein IagB 1114896..1115450 Aquifex aeolicus VF5 1193142 NP_214085.1 CDS pyrF NC_000918.1 1115453 1116148 D orotidine-5'-phosphate decarboxylase 1115453..1116148 Aquifex aeolicus VF5 1193143 NP_214086.1 CDS aq_1581 NC_000918.1 1116145 1116648 D hypothetical protein 1116145..1116648 Aquifex aeolicus VF5 1193144 NP_214087.1 CDS gidB NC_000918.1 1116629 1117219 D glucose inhibited division protein B 1116629..1117219 Aquifex aeolicus VF5 1193145 NP_214088.1 CDS aq_1583 NC_000918.1 1117204 1117893 D hypothetical protein 1117204..1117893 Aquifex aeolicus VF5 1193146 NP_214089.1 CDS aq_1585 NC_000918.1 1117890 1119074 D hypothetical protein 1117890..1119074 Aquifex aeolicus VF5 1193147 NP_214090.1 CDS atpF1 NC_000918.1 1119108 1119542 D ATP synthase F0 subunit b 1119108..1119542 Aquifex aeolicus VF5 1193148 NP_214091.1 CDS atpF2 NC_000918.1 1119542 1120099 D ATP synthase F0 subunit b 1119542..1120099 Aquifex aeolicus VF5 1193149 NP_214092.1 CDS atpH NC_000918.1 1120092 1120637 D ATP synthase F1 subunit delta 1120092..1120637 Aquifex aeolicus VF5 1193150 NP_214093.1 CDS ndk NC_000918.1 1120638 1121066 D nucleoside diphosphate kinase 1120638..1121066 Aquifex aeolicus VF5 1193151 NP_214096.1 CDS fliI NC_000918.1 1122505 1123836 R flagellar export protein complement(1122505..1123836) Aquifex aeolicus VF5 1193154 NP_214097.1 CDS aq_1596 NC_000918.1 1123763 1124446 R hypothetical protein complement(1123763..1124446) Aquifex aeolicus VF5 1193155 NP_214098.1 CDS aq_1598 NC_000918.1 1124683 1125633 D hypothetical protein 1124683..1125633 Aquifex aeolicus VF5 1193156 NP_214099.1 CDS aq_1599 NC_000918.1 1125619 1126095 R hypothetical protein complement(1125619..1126095) Aquifex aeolicus VF5 1193157 NP_214100.1 CDS pilD NC_000918.1 1126123 1126887 R type 4 prepilin peptidase complement(1126123..1126887) Aquifex aeolicus VF5 1193158 NP_214101.1 CDS secF NC_000918.1 1126884 1127750 R protein-export membrane protein complement(1126884..1127750) Aquifex aeolicus VF5 1193159 NP_214102.1 CDS aq_1603 NC_000918.1 1127747 1128403 R hypothetical protein complement(1127747..1128403) Aquifex aeolicus VF5 1193160 NP_214103.1 CDS pabC NC_000918.1 1129090 1129827 R aminodeoxychorismate lyase complement(1129090..1129827) Aquifex aeolicus VF5 1193161 NP_214104.1 CDS dcd NC_000918.1 1129820 1130362 R deoxycytidine triphosphate deaminase complement(1129820..1130362) Aquifex aeolicus VF5 1193162 NP_214105.1 CDS modA NC_000918.1 1130689 1131411 R molybdate periplasmic binding protein complement(1130689..1131411) Aquifex aeolicus VF5 1193163 NP_214106.1 CDS radC NC_000918.1 1131408 1132103 R Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC complement(1131408..1132103) Aquifex aeolicus VF5 1193164 NP_214107.1 CDS aq_1612 NC_000918.1 1132079 1133539 R hypothetical protein complement(1132079..1133539) Aquifex aeolicus VF5 1193165 NP_214108.1 CDS hisG NC_000918.1 1133511 1134155 R ATP phosphoribosyltransferase complement(1133511..1134155) Aquifex aeolicus VF5 1193166 NP_214109.1 CDS oadA NC_000918.1 1134152 1136014 R catalyzes the formation of oxaloacetate from pyruvate; pyruvate carboxylase subunit B complement(1134152..1136014) Aquifex aeolicus VF5 1193167 NP_214110.1 CDS aq_1618 NC_000918.1 1136058 1137299 D hypothetical protein 1136058..1137299 Aquifex aeolicus VF5 1193168 NP_214111.1 CDS sucC NC_000918.1 1137329 1138486 D catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 1137329..1138486 Aquifex aeolicus VF5 1193169 NP_214112.1 CDS sucD2 NC_000918.1 1138498 1139415 D succinyl-CoA ligase subunit alpha 1138498..1139415 Aquifex aeolicus VF5 1193170 YP_008920733.1 CDS aq_1622a NC_000918.1 1139479 1139709 D hypothetical protein 1139479..1139709 Aquifex aeolicus VF5 17925352 NP_214113.1 CDS aq_1625 NC_000918.1 1140007 1140756 D hypothetical protein 1140007..1140756 Aquifex aeolicus VF5 1193171 NP_214114.1 CDS aq_1627 NC_000918.1 1140765 1141145 D hypothetical protein 1140765..1141145 Aquifex aeolicus VF5 1193172 NP_214115.1 CDS pol NC_000918.1 1141158 1142027 D DNA polymerase I 1141158..1142027 Aquifex aeolicus VF5 1193173 NP_214116.1 CDS nfo NC_000918.1 1142009 1142857 R deoxyribonuclease IV complement(1142009..1142857) Aquifex aeolicus VF5 1193174 NP_214117.1 CDS aq_1630 NC_000918.1 1142857 1143834 R hypothetical protein complement(1142857..1143834) Aquifex aeolicus VF5 1193175 NP_214118.1 CDS aq_1631 NC_000918.1 1143906 1144397 R hypothetical protein complement(1143906..1144397) Aquifex aeolicus VF5 1193176 NP_214119.1 CDS aq_1632 NC_000918.1 1144450 1145574 R hypothetical protein complement(1144450..1145574) Aquifex aeolicus VF5 1193177 NP_214120.1 CDS gspA NC_000918.1 1145742 1146683 D glycerol-3-phosphate dehydrogenase 1145742..1146683 Aquifex aeolicus VF5 1193178 NP_214121.1 CDS prs NC_000918.1 1146815 1147750 R phosphoribosylpyrophosphate synthetase complement(1146815..1147750) Aquifex aeolicus VF5 1193179 NP_214122.1 CDS lplA NC_000918.1 1147879 1150245 R lipoate-protein ligase A complement(1147879..1150245) Aquifex aeolicus VF5 1193180 NP_214123.1 CDS glpC NC_000918.1 1150163 1151350 D oxido/reductase iron sulfur protein 1150163..1151350 Aquifex aeolicus VF5 1193181 NP_214124.1 CDS aq_1640 NC_000918.1 1151528 1152493 R hypothetical protein complement(1151528..1152493) Aquifex aeolicus VF5 1193182 NP_214125.1 CDS cap NC_000918.1 1152537 1153487 D capsular polysaccharide biosynthsis protein 1152537..1153487 Aquifex aeolicus VF5 1193183 NP_214126.1 CDS rplU NC_000918.1 1153904 1154200 R 50S ribosomal protein L21 complement(1153904..1154200) Aquifex aeolicus VF5 1193184 NP_214127.1 CDS rplO NC_000918.1 1154212 1154661 R 50S ribosomal protein L15 complement(1154212..1154661) Aquifex aeolicus VF5 1193185 NP_214128.1 CDS rpmD NC_000918.1 1154674 1155051 R 50S ribosomal protein L30 complement(1154674..1155051) Aquifex aeolicus VF5 1193278 NP_214129.1 CDS rpsE NC_000918.1 1155038 1155664 R located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 complement(1155038..1155664) Aquifex aeolicus VF5 1193279 NP_214130.1 CDS rplR NC_000918.1 1155676 1156050 R 50S ribosomal protein L18 complement(1155676..1156050) Aquifex aeolicus VF5 1193280 NP_214131.1 CDS rplF NC_000918.1 1156063 1156614 R ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 complement(1156063..1156614) Aquifex aeolicus VF5 1193281 NP_214132.1 CDS rpsH NC_000918.1 1156627 1157133 R ribosomal protein S08 complement(1156627..1157133) Aquifex aeolicus VF5 1193282 NP_214133.1 CDS rpsN NC_000918.1 1157174 1157362 R located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif; 30S ribosomal protein S14 complement(1157174..1157362) Aquifex aeolicus VF5 1193283 NP_214134.1 CDS rplE NC_000918.1 1157396 1157962 R part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 complement(1157396..1157962) Aquifex aeolicus VF5 1193284 NP_214135.1 CDS rplX NC_000918.1 1157964 1158362 R assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 complement(1157964..1158362) Aquifex aeolicus VF5 1193285 NP_214136.1 CDS rplN NC_000918.1 1158362 1158727 R binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 complement(1158362..1158727) Aquifex aeolicus VF5 1193286 NP_214137.1 CDS aq_1655 NC_000918.1 1158873 1159421 D hypothetical protein 1158873..1159421 Aquifex aeolicus VF5 1193287 NP_214138.1 CDS aq_1656 NC_000918.1 1159408 1160355 D hypothetical protein 1159408..1160355 Aquifex aeolicus VF5 1193288 NP_214139.1 CDS gcsH2 NC_000918.1 1160333 1160818 R part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H complement(1160333..1160818) Aquifex aeolicus VF5 1193289 NP_214140.1 CDS fucA1 NC_000918.1 1160802 1161365 R fuculose-1-phosphate aldolase complement(1160802..1161365) Aquifex aeolicus VF5 1193290 NP_214141.1 CDS bioW NC_000918.1 1161414 1162136 R catalyzes the formation of pimeloyl-CoA from pimelate and coenzyme A; 6-carboxyhexanoate--CoA ligase complement(1161414..1162136) Aquifex aeolicus VF5 1193291 NP_214142.1 CDS aq_1660 NC_000918.1 1162147 1162665 D hypothetical protein 1162147..1162665 Aquifex aeolicus VF5 1193292 NP_214143.1 CDS spoU NC_000918.1 1162651 1163286 R rRNA methylase SpoU complement(1162651..1163286) Aquifex aeolicus VF5 1193293 NP_214144.1 CDS flgK NC_000918.1 1163541 1164821 D flagellar hook associated protein FlgK 1163541..1164821 Aquifex aeolicus VF5 1193294 NP_214145.1 CDS flgL NC_000918.1 1164831 1166099 D flagellar hook associated protein FlgL 1164831..1166099 Aquifex aeolicus VF5 1193295 NP_214146.1 CDS accC1 NC_000918.1 1166096 1167430 R biotin carboxylase complement(1166096..1167430) Aquifex aeolicus VF5 1193296 NP_214147.1 CDS mdh2 NC_000918.1 1167443 1168447 R malate dehydrogenase complement(1167443..1168447) Aquifex aeolicus VF5 1193297 NP_214148.1 CDS aq_1666 NC_000918.1 1168398 1168979 R hypothetical protein complement(1168398..1168979) Aquifex aeolicus VF5 1193298 NP_214149.1 CDS thrS NC_000918.1 1169232 1171148 R catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase complement(1169232..1171148) Aquifex aeolicus VF5 1193299 NP_214150.1 CDS aq_1668 NC_000918.1 1171185 1172066 D hypothetical protein 1171185..1172066 Aquifex aeolicus VF5 1193300 NP_214151.1 CDS aq_1669 NC_000918.1 1172063 1172557 D hypothetical protein 1172063..1172557 Aquifex aeolicus VF5 1193301 NP_214152.1 CDS aq_1670 NC_000918.1 1172557 1173765 D hypothetical protein 1172557..1173765 Aquifex aeolicus VF5 1193302 NP_214153.1 CDS hslV NC_000918.1 1173775 1174305 D heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 1173775..1174305 Aquifex aeolicus VF5 1193303 NP_214154.1 CDS clpB NC_000918.1 1174423 1177443 R ATPase subunit of ATP-dependent protease complement(1174423..1177443) Aquifex aeolicus VF5 1193304 NP_214155.1 CDS aspS NC_000918.1 1177548 1179359 D catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 1177548..1179359 Aquifex aeolicus VF5 1193305 NP_214156.1 CDS fumX NC_000918.1 1179364 1179921 D C-terminal fumarate hydratase, class I 1179364..1179921 Aquifex aeolicus VF5 1193306 NP_214157.1 CDS aq_1680 NC_000918.1 1179914 1180711 D hypothetical protein 1179914..1180711 Aquifex aeolicus VF5 1193307 NP_214158.1 CDS amiB NC_000918.1 1180692 1181771 R N-acetylmuramoyl-L-alanine amidase complement(1180692..1181771) Aquifex aeolicus VF5 1193308 NP_214159.1 CDS aq_1682 NC_000918.1 1181743 1183401 R hypothetical protein complement(1181743..1183401) Aquifex aeolicus VF5 1193309 NP_214160.1 CDS alg NC_000918.1 1183451 1186099 R alginate synthesis-related protein complement(1183451..1186099) Aquifex aeolicus VF5 1193310 NP_214161.1 CDS aq_1687 NC_000918.1 1186099 1187541 R hypothetical protein complement(1186099..1187541) Aquifex aeolicus VF5 1193311 NP_214162.1 CDS aq_1689 NC_000918.1 1187534 1189078 R hypothetical protein complement(1187534..1189078) Aquifex aeolicus VF5 1193312 NP_214163.1 CDS aq_1691 NC_000918.1 1189111 1189527 D hypothetical protein 1189111..1189527 Aquifex aeolicus VF5 1193313 NP_214164.1 CDS dplF NC_000918.1 1189596 1190183 D N-terminus of phage SPO1 DNA polymerase 1189596..1190183 Aquifex aeolicus VF5 1193314 NP_214165.1 CDS aq_1694 NC_000918.1 1190170 1190883 R hypothetical protein complement(1190170..1190883) Aquifex aeolicus VF5 1193315 NP_214166.1 CDS aq_1695 NC_000918.1 1190915 1191805 R hypothetical protein complement(1190915..1191805) Aquifex aeolicus VF5 1193316 NP_214167.1 CDS aq_1695a NC_000918.1 1197190 1198440 R hypothetical protein complement(1197190..1198440) Aquifex aeolicus VF5 1194001 NP_214168.1 CDS galF NC_000918.1 1198437 1199330 R UDP-glucose pyrophosphorylase complement(1198437..1199330) Aquifex aeolicus VF5 1193317 NP_214169.1 CDS aq_1706 NC_000918.1 1199317 1199841 R hypothetical protein complement(1199317..1199841) Aquifex aeolicus VF5 1193318 NP_214170.1 CDS ribC NC_000918.1 1199835 1200458 R catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha complement(1199835..1200458) Aquifex aeolicus VF5 1193319 NP_214171.1 CDS pfkA NC_000918.1 1200460 1201425 R catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis; 6-phosphofructokinase complement(1200460..1201425) Aquifex aeolicus VF5 1193320 NP_214172.1 CDS metE NC_000918.1 1201422 1203707 R catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase complement(1201422..1203707) Aquifex aeolicus VF5 1193321 NP_214173.1 CDS argF NC_000918.1 1203752 1204672 D catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 1203752..1204672 Aquifex aeolicus VF5 1193322 NP_214174.1 CDS flgI NC_000918.1 1204653 1205735 R part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein complement(1204653..1205735) Aquifex aeolicus VF5 1193323 NP_214175.1 CDS flgH NC_000918.1 1205696 1206346 R flagellar L-ring protein FlgH complement(1205696..1206346) Aquifex aeolicus VF5 1193324 NP_214176.1 CDS fabG NC_000918.1 1206406 1207152 D 3-oxoacyl-ACP reductase 1206406..1207152 Aquifex aeolicus VF5 1193325 NP_214177.1 CDS acpP NC_000918.1 1207165 1207401 D carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 1207165..1207401 Aquifex aeolicus VF5 1193326 NP_214178.1 CDS fabF NC_000918.1 1207398 1208645 D 3-oxoacyl-ACP synthase 1207398..1208645 Aquifex aeolicus VF5 1193327 NP_214179.1 CDS maf NC_000918.1 1208642 1209214 D MAF protein 1208642..1209214 Aquifex aeolicus VF5 1193328 NP_214180.1 CDS aq_1719 NC_000918.1 1209385 1209780 R hypothetical protein complement(1209385..1209780) Aquifex aeolicus VF5 1193329 NP_214181.1 CDS ffh NC_000918.1 1209812 1211176 R signal recognition particle receptor protein complement(1209812..1211176) Aquifex aeolicus VF5 1193330 NP_214182.1 CDS truD NC_000918.1 1211217 1212374 R catalyzes the modification of U13 in tRNA(Glu); tRNA pseudouridine synthase D complement(1211217..1212374) Aquifex aeolicus VF5 1193331 NP_214183.1 CDS degT NC_000918.1 1212399 1213439 D DegT/DnrJ/Eryc1 family transcriptional regulator 1212399..1213439 Aquifex aeolicus VF5 1193332 NP_214184.1 CDS lepA NC_000918.1 1213458 1215260 D binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 1213458..1215260 Aquifex aeolicus VF5 1193333 NP_214185.1 CDS aq_1727 NC_000918.1 1215237 1216169 R hypothetical protein complement(1215237..1216169) Aquifex aeolicus VF5 1193334 YP_008920734.1 CDS aq_1727a NC_000918.1 1216818 1217123 R hypothetical protein complement(1216818..1217123) Aquifex aeolicus VF5 17925353 YP_008920735.1 CDS aq_1730a NC_000918.1 1217120 1217353 R SirA family protein complement(1217120..1217353) Aquifex aeolicus VF5 17925354 NP_214186.1 CDS pheT NC_000918.1 1217400 1219727 D catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 1217400..1219727 Aquifex aeolicus VF5 1193335 NP_214187.1 CDS aq_1731 NC_000918.1 1219923 1220483 D hypothetical protein 1219923..1220483 Aquifex aeolicus VF5 1193336 NP_214188.1 CDS aq_1732 NC_000918.1 1220470 1222146 D protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP; phosphodiesterase 1220470..1222146 Aquifex aeolicus VF5 1193337 NP_214189.1 CDS dnaJ1 NC_000918.1 1222227 1223321 D chaperone DnaJ 1222227..1223321 Aquifex aeolicus VF5 1193338 NP_214190.1 CDS cfa NC_000918.1 1223292 1224494 R cyclopropane-fatty-acyl-phospholipid synthase complement(1223292..1224494) Aquifex aeolicus VF5 1193339 NP_214191.1 CDS lytB NC_000918.1 1224574 1225443 D LytB protein 1224574..1225443 Aquifex aeolicus VF5 1193340 NP_214192.1 CDS aq_1740 NC_000918.1 1225416 1225934 D hypothetical protein 1225416..1225934 Aquifex aeolicus VF5 1193341 NP_214193.1 CDS aq_1741 NC_000918.1 1225914 1226345 R hypothetical protein complement(1225914..1226345) Aquifex aeolicus VF5 1193342 NP_214194.1 CDS lgtF NC_000918.1 1226887 1227642 R beta 1,4 glucosyltransferase complement(1226887..1227642) Aquifex aeolicus VF5 1193343 NP_214195.1 CDS aq_1743 NC_000918.1 1227660 1228937 D hypothetical protein 1227660..1228937 Aquifex aeolicus VF5 1193344 NP_214196.1 CDS gpmA NC_000918.1 1228916 1229578 R phosphoglycerate mutase complement(1228916..1229578) Aquifex aeolicus VF5 1193345 NP_214197.1 CDS murE NC_000918.1 1229799 1231247 R UDP-MurNac-tripeptide synthetase complement(1229799..1231247) Aquifex aeolicus VF5 1193346 NP_214198.1 CDS tyrS NC_000918.1 1232471 1233649 R catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase complement(1232471..1233649) Aquifex aeolicus VF5 1193347 NP_214199.1 CDS aq_1752 NC_000918.1 1233688 1234239 D hypothetical protein 1233688..1234239 Aquifex aeolicus VF5 1193348 NP_214200.1 CDS nlpD2 NC_000918.1 1234236 1234799 R lipoprotein NlpD fragment complement(1234236..1234799) Aquifex aeolicus VF5 1193349 NP_214201.1 CDS aq_1754 NC_000918.1 1234777 1235844 R hypothetical protein complement(1234777..1235844) Aquifex aeolicus VF5 1193350 NP_214202.1 CDS tyrA NC_000918.1 1235819 1236754 D prephenate dehydrogenase 1235819..1236754 Aquifex aeolicus VF5 1193351 NP_214203.1 CDS exbB NC_000918.1 1236751 1237197 D biopolymer transport exbB 1236751..1237197 Aquifex aeolicus VF5 1193352 NP_214204.1 CDS aq_1758 NC_000918.1 1237167 1238117 R hypothetical protein complement(1237167..1238117) Aquifex aeolicus VF5 1193353 NP_214205.1 CDS aq_1760 NC_000918.1 1238129 1238974 R hypothetical protein complement(1238129..1238974) Aquifex aeolicus VF5 1193354 NP_214206.1 CDS aq_1761 NC_000918.1 1239007 1241043 R hypothetical protein complement(1239007..1241043) Aquifex aeolicus VF5 1193355 YP_008920736.1 CDS aq_1761a NC_000918.1 1241054 1241488 R hypothetical protein complement(1241054..1241488) Aquifex aeolicus VF5 17925355 NP_214207.1 CDS aq_1763 NC_000918.1 1241651 1242745 D hypothetical protein 1241651..1242745 Aquifex aeolicus VF5 1193356 NP_214208.1 CDS tktA NC_000918.1 1243042 1245111 D transketolase 1243042..1245111 Aquifex aeolicus VF5 1193357 NP_214209.1 CDS rpsT NC_000918.1 1245177 1245518 D 30S ribosomal protein S20 1245177..1245518 Aquifex aeolicus VF5 1193358 NP_214210.1 CDS aq_1768 NC_000918.1 1245528 1246301 D hypothetical protein 1245528..1246301 Aquifex aeolicus VF5 1193359 NP_214211.1 CDS dld1 NC_000918.1 1246568 1248016 R D-lactate dehydrogenase complement(1246568..1248016) Aquifex aeolicus VF5 1193360 NP_214212.1 CDS leuS' NC_000918.1 1248006 1248875 R leucyl-tRNA synthetase complement(1248006..1248875) Aquifex aeolicus VF5 1193361 NP_214213.1 CDS hemD NC_000918.1 1249334 1250086 D catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; functions in tetrapyrrole and heme biosynthesis; uroporphyrinogen-III synthase 1249334..1250086 Aquifex aeolicus VF5 1193362 NP_214214.1 CDS lpxC NC_000918.1 1250094 1250942 D zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 1250094..1250942 Aquifex aeolicus VF5 1193363 NP_214215.1 CDS aq_1773 NC_000918.1 1250899 1251639 R hypothetical protein complement(1250899..1251639) Aquifex aeolicus VF5 1193364 NP_214216.1 CDS rpmA NC_000918.1 1251717 1252013 D involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 1251717..1252013 Aquifex aeolicus VF5 1193365 NP_214218.1 CDS aq_1776 NC_000918.1 1254811 1255521 R hypothetical protein complement(1254811..1255521) Aquifex aeolicus VF5 1193367 NP_214219.1 CDS infC NC_000918.1 1255532 1256059 R IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 complement(1255532..1256059) Aquifex aeolicus VF5 1193368 NP_214220.1 CDS fumB NC_000918.1 1256565 1257410 R Catalyzes the reversible hydration of fumaric acid to yield I-malic acid; fumarate hydratase complement(1256565..1257410) Aquifex aeolicus VF5 1193369 NP_214221.1 CDS mdh1 NC_000918.1 1257388 1258395 R Catalyzes the reversible oxidation of malate to oxaloacetate; malate dehydrogenase complement(1257388..1258395) Aquifex aeolicus VF5 1193462 NP_214222.1 CDS aco NC_000918.1 1258392 1260371 R Catalyzes the conversion of citrate to isocitrate; aconitate hydratase complement(1258392..1260371) Aquifex aeolicus VF5 1193463 NP_214223.1 CDS trpC NC_000918.1 1260424 1261197 R involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; indole-3-glycerol-phosphate synthase complement(1260424..1261197) Aquifex aeolicus VF5 1193464 NP_214224.1 CDS mviB NC_000918.1 1261151 1262650 R virulence factor MviB complement(1261151..1262650) Aquifex aeolicus VF5 1193465 NP_214225.1 CDS aq_1790 NC_000918.1 1262655 1263800 R hypothetical protein complement(1262655..1263800) Aquifex aeolicus VF5 1193466 NP_214226.1 CDS aq_1791 NC_000918.1 1263813 1264196 R hypothetical protein complement(1263813..1264196) Aquifex aeolicus VF5 1193467 NP_214227.1 CDS ntrC2 NC_000918.1 1264237 1265730 R NtrC family transcriptional regulator complement(1264237..1265730) Aquifex aeolicus VF5 1193468 NP_214228.1 CDS aq_1793 NC_000918.1 1265940 1266749 R hypothetical protein complement(1265940..1266749) Aquifex aeolicus VF5 1193469 NP_214229.1 CDS aq_1794 NC_000918.1 1266721 1267503 D hypothetical protein 1266721..1267503 Aquifex aeolicus VF5 1193470 NP_214230.1 CDS aq_1795 NC_000918.1 1267500 1268042 D hypothetical protein 1267500..1268042 Aquifex aeolicus VF5 1193471 NP_214231.1 CDS aq_1796 NC_000918.1 1268039 1269118 D hypothetical protein 1268039..1269118 Aquifex aeolicus VF5 1193472 NP_214232.1 CDS aq_1797 NC_000918.1 1269101 1269493 R hypothetical protein complement(1269101..1269493) Aquifex aeolicus VF5 1193473 NP_214233.1 CDS cphA1 NC_000918.1 1269541 1270521 R beta lactamase complement(1269541..1270521) Aquifex aeolicus VF5 1193474 NP_214234.1 CDS rhdA2 NC_000918.1 1270543 1271424 R thiosulfate sulfurtransferase complement(1270543..1271424) Aquifex aeolicus VF5 1193475 NP_214235.1 CDS aq_1800 NC_000918.1 1271426 1271860 R hypothetical protein complement(1271426..1271860) Aquifex aeolicus VF5 1193476 NP_214236.1 CDS aq_1802 NC_000918.1 1271857 1272345 R hypothetical protein complement(1271857..1272345) Aquifex aeolicus VF5 1193477 NP_214237.1 CDS soxB NC_000918.1 1272342 1274120 R sulfur oxidation protein SoxB complement(1272342..1274120) Aquifex aeolicus VF5 1193478 NP_214238.1 CDS aq_1806 NC_000918.1 1274166 1274786 R hypothetical protein complement(1274166..1274786) Aquifex aeolicus VF5 1193479 NP_214239.1 CDS aq_1807 NC_000918.1 1274799 1275602 R hypothetical protein complement(1274799..1275602) Aquifex aeolicus VF5 1193480 NP_214240.1 CDS aq_1809 NC_000918.1 1275616 1275948 R hypothetical protein complement(1275616..1275948) Aquifex aeolicus VF5 1193481 NP_214241.1 CDS aq_1810 NC_000918.1 1275970 1276431 R hypothetical protein complement(1275970..1276431) Aquifex aeolicus VF5 1193482 NP_214242.1 CDS trxA2 NC_000918.1 1276425 1276832 R thioredoxin complement(1276425..1276832) Aquifex aeolicus VF5 1193483 NP_214243.1 CDS thrA NC_000918.1 1277001 1278308 D homoserine dehydrogenase 1277001..1278308 Aquifex aeolicus VF5 1193484 NP_214244.1 CDS aq_1814 NC_000918.1 1278313 1279044 D hypothetical protein 1278313..1279044 Aquifex aeolicus VF5 1193485 NP_214245.1 CDS aq_1815 NC_000918.1 1279051 1279602 D hypothetical protein 1279051..1279602 Aquifex aeolicus VF5 1193486 NP_214246.1 CDS ksgA NC_000918.1 1279579 1280325 R dimethyladenosine transferase complement(1279579..1280325) Aquifex aeolicus VF5 1193487 NP_214247.1 CDS purU NC_000918.1 1280345 1281196 D formyltetrahydrofolate deformylase 1280345..1281196 Aquifex aeolicus VF5 1193488 NP_214248.1 CDS nfeD NC_000918.1 1281207 1282484 D nodulation competitiveness protein NfeD 1281207..1282484 Aquifex aeolicus VF5 1193489 NP_214249.1 CDS aq_1822 NC_000918.1 1282506 1282994 D hypothetical protein 1282506..1282994 Aquifex aeolicus VF5 1193490 NP_214251.1 CDS aq_1824 NC_000918.1 1283539 1284606 D hypothetical protein 1283539..1284606 Aquifex aeolicus VF5 1193492 NP_214252.1 CDS aq_1825 NC_000918.1 1284587 1285486 D hypothetical protein 1284587..1285486 Aquifex aeolicus VF5 1193493 NP_214253.1 CDS alr NC_000918.1 1285739 1286755 D alanine racemase 1285739..1286755 Aquifex aeolicus VF5 1193494 NP_214254.1 CDS aq_1827a NC_000918.1 1286704 1287396 R hypothetical protein complement(1286704..1287396) Aquifex aeolicus VF5 1194002 NP_214255.1 CDS aq_1829 NC_000918.1 1287540 1287965 R hypothetical protein complement(1287540..1287965) Aquifex aeolicus VF5 1193495 NP_214256.1 CDS rpsG1 NC_000918.1 1288398 1288880 R binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 complement(1288398..1288880) Aquifex aeolicus VF5 1193496 NP_214257.1 CDS rpsL NC_000918.1 1288884 1289270 R interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 complement(1288884..1289270) Aquifex aeolicus VF5 1193497 NP_214258.1 CDS purL NC_000918.1 1289323 1291560 D catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase II 1289323..1291560 Aquifex aeolicus VF5 1193498 NP_214259.1 CDS lsp NC_000918.1 1291521 1292024 D lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 1291521..1292024 Aquifex aeolicus VF5 1193499 NP_214260.1 CDS dapF NC_000918.1 1291962 1292801 R involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase complement(1291962..1292801) Aquifex aeolicus VF5 1193500 NP_214261.1 CDS exbD NC_000918.1 1292807 1293205 D biopolymer transport ExbD 1292807..1293205 Aquifex aeolicus VF5 1193501 NP_214262.1 CDS aq_1840a NC_000918.1 1293221 1293427 D copper chaperone 1293221..1293427 Aquifex aeolicus VF5 1194008 NP_214263.1 CDS prfB NC_000918.1 1293461 1294582 D recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1; peptide chain release factor 2 1293461..1294582 Aquifex aeolicus VF5 1193502 NP_214264.1 CDS aq_1842 NC_000918.1 1294568 1295440 R hypothetical protein complement(1294568..1295440) Aquifex aeolicus VF5 1193503 NP_214265.1 CDS aq_1843 NC_000918.1 1295462 1296496 R hypothetical protein complement(1295462..1296496) Aquifex aeolicus VF5 1193504 NP_214266.1 CDS aq_1844 NC_000918.1 1296612 1297172 R hypothetical protein complement(1296612..1297172) Aquifex aeolicus VF5 1193505 NP_214267.1 CDS aq_1845 NC_000918.1 1297169 1297861 R hypothetical protein complement(1297169..1297861) Aquifex aeolicus VF5 1193506 NP_214268.1 CDS aq_1847 NC_000918.1 1297865 1298218 R hypothetical protein complement(1297865..1298218) Aquifex aeolicus VF5 1193507 NP_214269.1 CDS aq_1849 NC_000918.1 1298231 1298890 R hypothetical protein complement(1298231..1298890) Aquifex aeolicus VF5 1193508 NP_214270.1 CDS aq_1850 NC_000918.1 1298926 1299558 R hypothetical protein complement(1298926..1299558) Aquifex aeolicus VF5 1193509 NP_214271.1 CDS ilvH NC_000918.1 1299551 1300129 R acetolactate synthase complement(1299551..1300129) Aquifex aeolicus VF5 1193510 NP_214272.1 CDS aq_1852 NC_000918.1 1300157 1302034 D hypothetical protein 1300157..1302034 Aquifex aeolicus VF5 1193511 NP_214273.1 CDS aq_1853 NC_000918.1 1302595 1303248 D hypothetical protein 1302595..1303248 Aquifex aeolicus VF5 1193512 NP_214274.1 CDS aq_1854 NC_000918.1 1303245 1303703 R hypothetical protein complement(1303245..1303703) Aquifex aeolicus VF5 1193513 NP_214275.1 CDS dnaX NC_000918.1 1303882 1305303 D DNA polymerase III subunit gamma 1303882..1305303 Aquifex aeolicus VF5 1193514 NP_214276.1 CDS uvrB NC_000918.1 1305589 1307580 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 1305589..1307580 Aquifex aeolicus VF5 1193515 NP_214277.1 CDS aq_1857 NC_000918.1 1307598 1307948 R hypothetical protein complement(1307598..1307948) Aquifex aeolicus VF5 1193516 NP_214278.1 CDS aq_1858 NC_000918.1 1308165 1308794 D flagellar hook assembly protein 1308165..1308794 Aquifex aeolicus VF5 1193517 NP_214279.1 CDS flgE NC_000918.1 1308798 1310246 D flagellar hook protein FlgE 1308798..1310246 Aquifex aeolicus VF5 1193518 NP_214280.1 CDS fliL NC_000918.1 1310298 1310783 D flagellar biosynthesis FliL 1310298..1310783 Aquifex aeolicus VF5 1193519 NP_214281.1 CDS aq_1861 NC_000918.1 1310860 1311888 D hypothetical protein 1310860..1311888 Aquifex aeolicus VF5 1193520 NP_214282.1 CDS aq_1862 NC_000918.1 1311923 1313080 R hypothetical protein complement(1311923..1313080) Aquifex aeolicus VF5 1193521 NP_214283.1 CDS kch NC_000918.1 1313240 1314607 D potassium channel protein 1313240..1314607 Aquifex aeolicus VF5 1193522 NP_214284.1 CDS asd NC_000918.1 1315363 1316385 D aspartate-semialdehyde dehydrogenase 1315363..1316385 Aquifex aeolicus VF5 1193523 NP_214285.1 CDS aq_1869 NC_000918.1 1316399 1316812 D hypothetical protein 1316399..1316812 Aquifex aeolicus VF5 1193524 NP_214286.1 CDS secA NC_000918.1 1316869 1319823 D functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 1316869..1319823 Aquifex aeolicus VF5 1193525 NP_214287.1 CDS pmbA NC_000918.1 1319839 1321164 D peptide maturation 1319839..1321164 Aquifex aeolicus VF5 1193526 NP_214288.1 CDS aq_1873 NC_000918.1 1321781 1323004 D hypothetical protein 1321781..1323004 Aquifex aeolicus VF5 1193527 NP_214289.1 CDS mraW NC_000918.1 1323017 1323901 D S-adenosyl-methyltransferase MraW 1323017..1323901 Aquifex aeolicus VF5 1193528 NP_214290.1 CDS rplM NC_000918.1 1323947 1324381 D in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 1323947..1324381 Aquifex aeolicus VF5 1193529 NP_214291.1 CDS rpsI NC_000918.1 1324378 1324821 D forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 1324378..1324821 Aquifex aeolicus VF5 1193530 NP_214292.1 CDS argC NC_000918.1 1324806 1325828 D N-acetyl-gamma-glutamylphosphate reductase 1324806..1325828 Aquifex aeolicus VF5 1193531 NP_214293.1 CDS dnaN NC_000918.1 1325853 1326944 D DNA polymerase III subunit beta 1325853..1326944 Aquifex aeolicus VF5 1193532 NP_214294.1 CDS aq_1884 NC_000918.1 1327171 1327923 D hypothetical protein 1327171..1327923 Aquifex aeolicus VF5 1193533 NP_214295.1 CDS sbcD NC_000918.1 1327901 1329040 D ATP-dependent dsDNA exonuclease 1327901..1329040 Aquifex aeolicus VF5 1193534 NP_214296.1 CDS mesJ NC_000918.1 1329030 1329983 D cell cycle protein MesJ 1329030..1329983 Aquifex aeolicus VF5 1193535 NP_214297.1 CDS sucD1 NC_000918.1 1329967 1331073 R succinyl-CoA ligase subunit alpha complement(1329967..1331073) Aquifex aeolicus VF5 1193536 NP_214298.1 CDS nadA NC_000918.1 1331127 1332095 D 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 1331127..1332095 Aquifex aeolicus VF5 1193537 NP_214299.1 CDS tsnR NC_000918.1 1332092 1332814 R rRNA methylase complement(1332092..1332814) Aquifex aeolicus VF5 1193538 NP_214300.1 CDS aq_1891 NC_000918.1 1332824 1333930 R hypothetical protein complement(1332824..1333930) Aquifex aeolicus VF5 1193539 NP_214301.1 CDS ilvE NC_000918.1 1333920 1334855 R catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase complement(1333920..1334855) Aquifex aeolicus VF5 1193540 NP_214302.1 CDS aq_1894 NC_000918.1 1334770 1335483 D hypothetical protein 1334770..1335483 Aquifex aeolicus VF5 1193541 NP_214303.1 CDS aq_1896 NC_000918.1 1335480 1336508 D hypothetical protein 1335480..1336508 Aquifex aeolicus VF5 1193542 NP_214304.1 CDS folD NC_000918.1 1336481 1337356 R methylenetetrahydrofolate dehydrogenase complement(1336481..1337356) Aquifex aeolicus VF5 1193543 NP_214305.1 CDS dmt NC_000918.1 1337340 1338308 R dolichol-phosphate mannosyltransferase complement(1337340..1338308) Aquifex aeolicus VF5 1193544 NP_214306.1 CDS aq_1899a NC_000918.1 1338336 1338842 D hypothetical protein 1338336..1338842 Aquifex aeolicus VF5 1194003 NP_214307.1 CDS aq_1899b NC_000918.1 1338855 1339262 D hypothetical protein 1338855..1339262 Aquifex aeolicus VF5 1194004 NP_214308.1 CDS gcsP1 NC_000918.1 1339276 1340724 D acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein; glycine dehydrogenase subunit 2 1339276..1340724 Aquifex aeolicus VF5 1193545 NP_214309.1 CDS serA NC_000918.1 1340752 1342353 D catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 1340752..1342353 Aquifex aeolicus VF5 1193546 NP_214310.1 CDS umpS NC_000918.1 1342372 1342923 D uridine 5-monophosphate synthase 1342372..1342923 Aquifex aeolicus VF5 1193547 NP_214311.1 CDS hflX NC_000918.1 1342920 1344032 R GTP-binding protein HflX complement(1342920..1344032) Aquifex aeolicus VF5 1193548 YP_008920737.1 CDS aq_1908a NC_000918.1 1344072 1344287 R hypothetical protein complement(1344072..1344287) Aquifex aeolicus VF5 17925356 NP_214312.1 CDS aq_1909 NC_000918.1 1344366 1345295 D hypothetical protein 1344366..1345295 Aquifex aeolicus VF5 1193549 NP_214313.1 CDS aq_1910 NC_000918.1 1345378 1346493 D hypothetical protein 1345378..1346493 Aquifex aeolicus VF5 1193550 NP_214314.1 CDS aq_1912 NC_000918.1 1346869 1348326 D hypothetical protein 1346869..1348326 Aquifex aeolicus VF5 1193551 NP_214315.1 CDS trxA1 NC_000918.1 1348671 1349090 D thioredoxin 1348671..1349090 Aquifex aeolicus VF5 1193552 NP_214316.1 CDS aq_1917 NC_000918.1 1349003 1350040 D hypothetical protein 1349003..1350040 Aquifex aeolicus VF5 1193553 NP_214317.1 CDS engA NC_000918.1 1350037 1351338 D EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 1350037..1351338 Aquifex aeolicus VF5 1193646 NP_214318.1 CDS fliP NC_000918.1 1351339 1352058 R FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP complement(1351339..1352058) Aquifex aeolicus VF5 1193647 NP_214319.1 CDS aq_1922 NC_000918.1 1352290 1353285 R catalyzes the formation of 3-dehydroquinate from 3-deoxy-aribino-heptulonate 7-phosphate; 3-dehydroquinate synthase complement(1352290..1353285) Aquifex aeolicus VF5 1193648 NP_214320.1 CDS aq_1923 NC_000918.1 1353310 1354200 D hypothetical protein 1353310..1354200 Aquifex aeolicus VF5 1193649 NP_214321.1 CDS aq_1924 NC_000918.1 1354174 1354863 R hypothetical protein complement(1354174..1354863) Aquifex aeolicus VF5 1193650 NP_214322.1 CDS hyuB NC_000918.1 1354860 1356425 R N-methylhydantoinase B complement(1354860..1356425) Aquifex aeolicus VF5 1193651 NP_214323.1 CDS tufA2 NC_000918.1 1356932 1358149 D EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 1356932..1358149 Aquifex aeolicus VF5 1193652 NP_214324.1 CDS rpmG NC_000918.1 1358160 1358312 D in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group have the CXXC motif; 50S ribosomal protein L33 1358160..1358312 Aquifex aeolicus VF5 1193653 NP_214325.1 CDS secE NC_000918.1 1358431 1358628 D preprotein translocase subunit SecE 1358431..1358628 Aquifex aeolicus VF5 1193999 NP_214326.1 CDS nusG NC_000918.1 1358625 1359371 D transcription antitermination protein NusG 1358625..1359371 Aquifex aeolicus VF5 1193654 NP_214327.1 CDS rplK NC_000918.1 1359386 1359823 D binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 1359386..1359823 Aquifex aeolicus VF5 1193655 NP_214328.1 CDS rplA NC_000918.1 1359828 1360556 D in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 1359828..1360556 Aquifex aeolicus VF5 1193656 NP_214329.1 CDS rplJ NC_000918.1 1360571 1361170 D binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 1360571..1361170 Aquifex aeolicus VF5 1193657 NP_214330.1 CDS rplL NC_000918.1 1361173 1361559 D present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 1361173..1361559 Aquifex aeolicus VF5 1193658 NP_214331.1 CDS rpoB NC_000918.1 1361772 1366178 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 1361772..1366178 Aquifex aeolicus VF5 1193659 NP_214332.1 CDS rpoC NC_000918.1 1366175 1370899 D RNA polymerase subunit beta' 1366175..1370899 Aquifex aeolicus VF5 1193660 NP_214333.1 CDS aprV NC_000918.1 1370896 1372578 R serine protease complement(1370896..1372578) Aquifex aeolicus VF5 1193661 NP_214334.1 CDS aq_1952 NC_000918.1 1372613 1373650 D hypothetical protein 1372613..1373650 Aquifex aeolicus VF5 1193662 NP_214335.1 CDS aq_1953 NC_000918.1 1373638 1374096 R hypothetical protein complement(1373638..1374096) Aquifex aeolicus VF5 1193663 NP_214336.1 CDS rplS NC_000918.1 1374064 1374528 D this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 1374064..1374528 Aquifex aeolicus VF5 1193664 NP_214337.1 CDS rnhB NC_000918.1 1374521 1375111 D RNase HII 1374521..1375111 Aquifex aeolicus VF5 1193665 NP_214338.1 CDS aq_1956 NC_000918.1 1375108 1375890 R hypothetical protein complement(1375108..1375890) Aquifex aeolicus VF5 1193666 NP_214339.1 CDS aq_1958 NC_000918.1 1376132 1377250 R hypothetical protein complement(1376132..1377250) Aquifex aeolicus VF5 1193667 NP_214340.1 CDS aq_1959 NC_000918.1 1377316 1377798 D hypothetical protein 1377316..1377798 Aquifex aeolicus VF5 1193668 NP_214341.1 CDS thiD NC_000918.1 1377795 1378562 D HMP-P kinase 1377795..1378562 Aquifex aeolicus VF5 1193669 NP_214342.1 CDS fliR NC_000918.1 1378549 1379325 R flagellar biosynthetic protein FliR complement(1378549..1379325) Aquifex aeolicus VF5 1193670 NP_214343.1 CDS fliQ NC_000918.1 1379313 1379582 R flagellar biosynthesis protein FliQ complement(1379313..1379582) Aquifex aeolicus VF5 1193671 NP_214344.1 CDS purH NC_000918.1 1380178 1381698 R involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase complement(1380178..1381698) Aquifex aeolicus VF5 1193672 NP_214345.1 CDS aq_1964 NC_000918.1 1381711 1383000 R hypothetical protein complement(1381711..1383000) Aquifex aeolicus VF5 1193673 NP_214346.1 CDS aq_1965 NC_000918.1 1383000 1383404 R hypothetical protein complement(1383000..1383404) Aquifex aeolicus VF5 1193674 NP_214347.1 CDS aq_1966 NC_000918.1 1383388 1383993 R hypothetical protein complement(1383388..1383993) Aquifex aeolicus VF5 1193675 NP_214348.1 CDS polA NC_000918.1 1384011 1385735 D DNA polymerase I (PolI) 1384011..1385735 Aquifex aeolicus VF5 1193676 NP_214349.1 CDS hisIE NC_000918.1 1385746 1386363 D catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP 1385746..1386363 Aquifex aeolicus VF5 1193677 NP_214350.1 CDS aspC1 NC_000918.1 1386624 1387808 D aspartate aminotransferase 1386624..1387808 Aquifex aeolicus VF5 1193678 NP_214351.1 CDS tapB NC_000918.1 1387805 1389505 R type IV pilus assembly protein TapB complement(1387805..1389505) Aquifex aeolicus VF5 1193679 NP_214352.1 CDS panB NC_000918.1 1389498 1390295 R catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase complement(1389498..1390295) Aquifex aeolicus VF5 1193680 NP_214353.1 CDS aq_1974 NC_000918.1 1390299 1390643 R hypothetical protein complement(1390299..1390643) Aquifex aeolicus VF5 1193681 NP_214354.1 CDS aq_1975 NC_000918.1 1390681 1391232 D hypothetical protein 1390681..1391232 Aquifex aeolicus VF5 1193682 NP_214355.1 CDS masA NC_000918.1 1391225 1391896 D enolase-phosphatase E-1 1391225..1391896 Aquifex aeolicus VF5 1193683 NP_214356.1 CDS aq_1978 NC_000918.1 1391893 1392258 D hypothetical protein 1391893..1392258 Aquifex aeolicus VF5 1193684 NP_214357.1 CDS fucA2 NC_000918.1 1392255 1392881 D catalyzes the formation of diketo methylthiopentyl phosphate from methylribulose phosphate in the methionine salvage pathway; methylthioribulose-1-phosphate dehydratase 1392255..1392881 Aquifex aeolicus VF5 1193685 NP_214358.1 CDS aq_1980 NC_000918.1 1393228 1394154 R hypothetical protein complement(1393228..1394154) Aquifex aeolicus VF5 1193686 NP_214359.1 CDS aq_1982 NC_000918.1 1394503 1395147 D hypothetical protein 1394503..1395147 Aquifex aeolicus VF5 1193687 NP_214360.1 CDS imp2 NC_000918.1 1395158 1395952 D myo-inositol-1(or 4)-monophosphatase 1395158..1395952 Aquifex aeolicus VF5 1193688 NP_214361.1 CDS aq_1985 NC_000918.1 1395949 1396539 D hypothetical protein 1395949..1396539 Aquifex aeolicus VF5 1193689 NP_214362.1 CDS aq_1986 NC_000918.1 1396523 1397248 R hypothetical protein complement(1396523..1397248) Aquifex aeolicus VF5 1193690 NP_214363.1 CDS aq_1987 NC_000918.1 1397248 1397649 R hypothetical protein complement(1397248..1397649) Aquifex aeolicus VF5 1193691 NP_214364.1 CDS tolQ NC_000918.1 1397654 1398268 R TolQ-like protein complement(1397654..1398268) Aquifex aeolicus VF5 1193692 NP_214365.1 CDS aq_1989 NC_000918.1 1398272 1400833 R hypothetical protein complement(1398272..1400833) Aquifex aeolicus VF5 1193693 NP_214366.1 CDS pgmA NC_000918.1 1400808 1401446 R phosphoglycerate mutase complement(1400808..1401446) Aquifex aeolicus VF5 1193694 NP_214367.1 CDS htpX NC_000918.1 1401455 1402363 R heat shock protein X complement(1401455..1402363) Aquifex aeolicus VF5 1193695 NP_214368.1 CDS aq_1993 NC_000918.1 1402380 1403027 R hypothetical protein complement(1402380..1403027) Aquifex aeolicus VF5 1193696 NP_214369.1 CDS era NC_000918.1 1403011 1403916 R Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era complement(1403011..1403916) Aquifex aeolicus VF5 1193697 NP_214370.1 CDS aq_1996 NC_000918.1 1403979 1404668 R hypothetical protein complement(1403979..1404668) Aquifex aeolicus VF5 1193698 NP_214371.1 CDS aq_1997 NC_000918.1 1404707 1405402 D hypothetical protein 1404707..1405402 Aquifex aeolicus VF5 1193699 NP_214372.1 CDS fliC NC_000918.1 1405481 1407037 D flagellin 1405481..1407037 Aquifex aeolicus VF5 1193700 NP_214373.1 CDS aq_2000 NC_000918.1 1407080 1407445 D hypothetical protein 1407080..1407445 Aquifex aeolicus VF5 1193701 NP_214374.1 CDS fliD NC_000918.1 1407448 1408773 D flagellar hook associated protein FliD 1407448..1408773 Aquifex aeolicus VF5 1193702 NP_214375.1 CDS fliS NC_000918.1 1408770 1409144 D flagellar protein FliS 1408770..1409144 Aquifex aeolicus VF5 1193703 NP_214378.1 CDS rpsB NC_000918.1 1410986 1411810 R one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 complement(1410986..1411810) Aquifex aeolicus VF5 1193706 NP_214379.1 CDS aq_2009 NC_000918.1 1411902 1412879 R hypothetical protein complement(1411902..1412879) Aquifex aeolicus VF5 1193707 NP_214380.1 CDS aq_2011 NC_000918.1 1412896 1415712 R hypothetical protein complement(1412896..1415712) Aquifex aeolicus VF5 1193708 NP_214381.1 CDS aq_2013 NC_000918.1 1415787 1416200 D hypothetical protein 1415787..1416200 Aquifex aeolicus VF5 1193709 NP_214382.1 CDS flhB NC_000918.1 1416211 1417263 D flagellar biosynthetic protein FlhB 1416211..1417263 Aquifex aeolicus VF5 1193710 NP_214383.1 CDS hemG NC_000918.1 1417254 1418564 R protoporphyrinogen oxidase complement(1417254..1418564) Aquifex aeolicus VF5 1193711 NP_214384.1 CDS pstS NC_000918.1 1419127 1420140 D phosphate-binding periplasmic protein 1419127..1420140 Aquifex aeolicus VF5 1193712 NP_214385.1 CDS pstC NC_000918.1 1420127 1421089 D phosphate ABC transporter permease 1420127..1421089 Aquifex aeolicus VF5 1193713 NP_214386.1 CDS pstA NC_000918.1 1421068 1421925 D phosphate ABC transporter permease 1421068..1421925 Aquifex aeolicus VF5 1193714 NP_214387.1 CDS aq_2020 NC_000918.1 1421693 1422364 D hypothetical protein 1421693..1422364 Aquifex aeolicus VF5 1193715 NP_214388.1 CDS tldD NC_000918.1 1422407 1423621 D TldD protein 1422407..1423621 Aquifex aeolicus VF5 1193716 NP_214389.1 CDS guaB NC_000918.1 1424165 1425637 D inosine monophosphate dehydrogenase 1424165..1425637 Aquifex aeolicus VF5 1193717 NP_214390.1 CDS aq_2027 NC_000918.1 1425634 1426728 R hypothetical protein complement(1425634..1426728) Aquifex aeolicus VF5 1193718 NP_214391.1 CDS aq_2028 NC_000918.1 1426749 1427258 D hypothetical protein 1426749..1427258 Aquifex aeolicus VF5 1193719 NP_214392.1 CDS napA3 NC_000918.1 1427260 1428528 D Na(+)/H(+) antiporter 1427260..1428528 Aquifex aeolicus VF5 1193720 NP_214394.1 CDS infB NC_000918.1 1429084 1431501 D Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 1429084..1431501 Aquifex aeolicus VF5 1193722 NP_214395.1 CDS aq_2035 NC_000918.1 1431465 1432124 D hypothetical protein 1431465..1432124 Aquifex aeolicus VF5 1193723 NP_214396.1 CDS aq_2036 NC_000918.1 1432121 1432771 D hypothetical protein 1432121..1432771 Aquifex aeolicus VF5 1193724 NP_214397.1 CDS atpD NC_000918.1 1432768 1434204 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta complement(1432768..1434204) Aquifex aeolicus VF5 1193725 NP_214398.1 CDS atpG1 NC_000918.1 1434218 1435093 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma complement(1434218..1435093) Aquifex aeolicus VF5 1193726 NP_214399.1 CDS rplI NC_000918.1 1435164 1435613 D in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 1435164..1435613 Aquifex aeolicus VF5 1193727 NP_214400.1 CDS hemX2 NC_000918.1 1435623 1436561 D cytochrome C biogenesis protein 1435623..1436561 Aquifex aeolicus VF5 1193728 NP_214401.1 CDS aq_2044 NC_000918.1 1436551 1437729 R hypothetical protein complement(1436551..1437729) Aquifex aeolicus VF5 1193729 NP_214402.1 CDS folC NC_000918.1 1437734 1438966 R folylpolyglutamate synthetase complement(1437734..1438966) Aquifex aeolicus VF5 1193730 NP_214403.1 CDS vacB NC_000918.1 1438996 1441113 D VacB/RNase II family 3'-5' exoribonuclease 1438996..1441113 Aquifex aeolicus VF5 1193731 NP_214404.1 CDS aq_2049 NC_000918.1 1441129 1441695 D hypothetical protein 1441129..1441695 Aquifex aeolicus VF5 1193732 NP_214405.1 CDS flgG1 NC_000918.1 1441695 1442420 D flagellar hook basal-body protein FlgG 1441695..1442420 Aquifex aeolicus VF5 1193733 NP_214406.1 CDS recG NC_000918.1 1442417 1444795 R catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG complement(1442417..1444795) Aquifex aeolicus VF5 1193734 NP_214407.1 CDS aq_2054 NC_000918.1 1444797 1448147 R hypothetical protein complement(1444797..1448147) Aquifex aeolicus VF5 1193735 NP_214408.1 CDS aq_2056 NC_000918.1 1448156 1448791 R hypothetical protein complement(1448156..1448791) Aquifex aeolicus VF5 1193736 NP_214409.1 CDS helX NC_000918.1 1448818 1450410 R DNA helicase complement(1448818..1450410) Aquifex aeolicus VF5 1193737 NP_214410.1 CDS aas NC_000918.1 1450301 1450936 D 2-acylglycerophosphoethanolamine acyltransferase 1450301..1450936 Aquifex aeolicus VF5 1193830 NP_214411.1 CDS aq_2059 NC_000918.1 1450915 1451556 R hypothetical protein complement(1450915..1451556) Aquifex aeolicus VF5 1193831 NP_214412.1 CDS aq_2060 NC_000918.1 1451540 1452904 R hypothetical protein complement(1451540..1452904) Aquifex aeolicus VF5 1193832 NP_214413.1 CDS aq_2063 NC_000918.1 1453189 1453548 R hypothetical protein complement(1453189..1453548) Aquifex aeolicus VF5 1193833 NP_214414.1 CDS gltD NC_000918.1 1453545 1454975 R glutamate synthase small subunit GltD complement(1453545..1454975) Aquifex aeolicus VF5 1193834 NP_214415.1 CDS aq_2066 NC_000918.1 1455015 1455485 D hypothetical protein 1455015..1455485 Aquifex aeolicus VF5 1193835 NP_214416.2 CDS aq_2067 NC_000918.1 1455497 1455835 D hypothetical protein 1455497..1455835 Aquifex aeolicus VF5 1193836 NP_214417.1 CDS argB NC_000918.1 1455909 1456727 D acetylglutamate kinase 1455909..1456727 Aquifex aeolicus VF5 1193837 NP_214418.1 CDS obgE NC_000918.1 1456740 1457771 D essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 1456740..1457771 Aquifex aeolicus VF5 1193838 NP_214419.1 CDS aq_2071 NC_000918.1 1457797 1458972 D hypothetical protein 1457797..1458972 Aquifex aeolicus VF5 1193839 NP_214420.1 CDS aq_2073 NC_000918.1 1458969 1460126 D hypothetical protein 1458969..1460126 Aquifex aeolicus VF5 1193840 NP_214421.1 CDS murD NC_000918.1 1460123 1461370 D UDP-N-acetylmuramoylalanine-D-glutamate ligase 1460123..1461370 Aquifex aeolicus VF5 1193841 NP_214422.1 CDS trpF NC_000918.1 1461357 1461971 R phosphoribosyl anthranilate isomerase complement(1461357..1461971) Aquifex aeolicus VF5 1193842 NP_214423.1 CDS snf NC_000918.1 1461990 1463531 D SNF family Na(+)/neurotransmitter symporter 1461990..1463531 Aquifex aeolicus VF5 1193843 NP_214424.1 CDS sppA NC_000918.1 1463518 1464369 D proteinase IV 1463518..1464369 Aquifex aeolicus VF5 1193844 NP_214425.1 CDS aq_2082 NC_000918.1 1464647 1466260 D hypothetical protein 1464647..1466260 Aquifex aeolicus VF5 1193845 NP_214426.1 CDS hisC NC_000918.1 1466246 1467310 R histidinol-phosphate aminotransferase complement(1466246..1467310) Aquifex aeolicus VF5 1193846 NP_214427.1 CDS aq_2085 NC_000918.1 1467575 1468078 R hypothetical protein complement(1467575..1468078) Aquifex aeolicus VF5 1193847 NP_214428.1 CDS aq_2086 NC_000918.1 1468059 1468415 R hypothetical protein complement(1468059..1468415) Aquifex aeolicus VF5 1193848 NP_214429.1 CDS aq_2087 NC_000918.1 1468412 1468963 R hypothetical protein complement(1468412..1468963) Aquifex aeolicus VF5 1193849 NP_214430.1 CDS aq_2088 NC_000918.1 1468992 1469498 D hypothetical protein 1468992..1469498 Aquifex aeolicus VF5 1193850 NP_214431.1 CDS leuA2 NC_000918.1 1469552 1471126 D 2-isopropylmalate synthase 1469552..1471126 Aquifex aeolicus VF5 1193851 NP_214432.1 CDS dsbC NC_000918.1 1471392 1472108 D thiol:disulfide interchange protein 1471392..1472108 Aquifex aeolicus VF5 1193852 NP_214433.1 CDS aspC2 NC_000918.1 1472329 1473573 R aminotransferase complement(1472329..1473573) Aquifex aeolicus VF5 1193853 NP_214434.1 CDS dksA NC_000918.1 1473566 1473928 R dnaK suppressor protein complement(1473566..1473928) Aquifex aeolicus VF5 1193854 NP_214435.1 CDS floX NC_000918.1 1473947 1474504 R flavodoxin complement(1473947..1474504) Aquifex aeolicus VF5 1193855 NP_214436.1 CDS aq_2098 NC_000918.1 1474521 1475360 R hypothetical protein complement(1474521..1475360) Aquifex aeolicus VF5 1193856 NP_214437.1 CDS pepA NC_000918.1 1475353 1476834 R catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase complement(1475353..1476834) Aquifex aeolicus VF5 1193857 NP_214438.1 CDS carB2 NC_000918.1 1476861 1478534 D carbamoyl-phosphate synthase large subunit 1476861..1478534 Aquifex aeolicus VF5 1193858 NP_214439.1 CDS prmA NC_000918.1 1478521 1479258 D 50S ribosomal protein L11 methyltransferase 1478521..1479258 Aquifex aeolicus VF5 1193859 NP_214443.1 CDS aq_2107 NC_000918.1 1483320 1485179 D hypothetical protein 1483320..1485179 Aquifex aeolicus VF5 1193863 NP_214444.1 CDS aq_2108 NC_000918.1 1485176 1485808 D hypothetical protein 1485176..1485808 Aquifex aeolicus VF5 1193864 NP_214445.1 CDS hemB NC_000918.1 1485819 1486811 D catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 1485819..1486811 Aquifex aeolicus VF5 1193865 NP_214446.1 CDS acuC2 NC_000918.1 1486808 1487740 D acetoin utilization protein 1486808..1487740 Aquifex aeolicus VF5 1193866 NP_214447.1 CDS aq_2113 NC_000918.1 1488032 1488808 D hypothetical protein 1488032..1488808 Aquifex aeolicus VF5 1193867 NP_214448.1 CDS eif NC_000918.1 1488786 1490156 R initiation factor eIF-2B subunit alpha complement(1488786..1490156) Aquifex aeolicus VF5 1193868 NP_214449.1 CDS rfaG NC_000918.1 1490168 1491274 R glucosyl transferase I complement(1490168..1491274) Aquifex aeolicus VF5 1193869 NP_214450.1 CDS purC NC_000918.1 1491677 1492327 R catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase complement(1491677..1492327) Aquifex aeolicus VF5 1193870 NP_214451.1 CDS aq_2118 NC_000918.1 1492324 1492845 R hypothetical protein complement(1492324..1492845) Aquifex aeolicus VF5 1193871 NP_214452.1 CDS thiL NC_000918.1 1492805 1493725 R thiamine monophosphate kinase complement(1492805..1493725) Aquifex aeolicus VF5 1193872 NP_214453.1 CDS hlyC NC_000918.1 1493722 1494990 R hemolysin homolog protein complement(1493722..1494990) Aquifex aeolicus VF5 1193873 NP_214454.1 CDS abcT11 NC_000918.1 1494959 1495876 R ABC transporter complement(1494959..1495876) Aquifex aeolicus VF5 1193874 NP_214455.1 CDS hemN NC_000918.1 1495878 1497248 R catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase complement(1495878..1497248) Aquifex aeolicus VF5 1193875 NP_214456.1 CDS uvrC NC_000918.1 1497725 1499425 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 1497725..1499425 Aquifex aeolicus VF5 1193876 NP_214457.1 CDS aq_2128 NC_000918.1 1499413 1499835 D hypothetical protein 1499413..1499835 Aquifex aeolicus VF5 1193877 NP_214458.1 CDS sbf NC_000918.1 1500045 1500938 R sodium bile acid symporter family Na(+) dependent transporter complement(1500045..1500938) Aquifex aeolicus VF5 1193878 NP_214459.1 CDS fmt NC_000918.1 1501407 1502318 R methionyl-tRNA formyltransferase complement(1501407..1502318) Aquifex aeolicus VF5 1193879 NP_214460.1 CDS panC NC_000918.1 1502315 1503163 R pantothenate synthetase complement(1502315..1503163) Aquifex aeolicus VF5 1193880 NP_214461.1 CDS aq_2134 NC_000918.1 1503157 1503528 D hypothetical protein 1503157..1503528 Aquifex aeolicus VF5 1193881 NP_214462.1 CDS aq_2135 NC_000918.1 1503518 1504153 D hypothetical protein 1503518..1504153 Aquifex aeolicus VF5 1193882 NP_214463.1 CDS abcT12 NC_000918.1 1504146 1504907 D ABC transporter 1504146..1504907 Aquifex aeolicus VF5 1193883 NP_214464.1 CDS aq_2138 NC_000918.1 1504917 1505540 D hypothetical protein 1504917..1505540 Aquifex aeolicus VF5 1193884 NP_214465.1 CDS aq_2139 NC_000918.1 1505500 1506153 D hypothetical protein 1505500..1506153 Aquifex aeolicus VF5 1193885 NP_214466.1 CDS aq_2140 NC_000918.1 1506134 1506439 R hypothetical protein complement(1506134..1506439) Aquifex aeolicus VF5 1193886 NP_214467.1 CDS glyS NC_000918.1 1506462 1508456 D glycyl-tRNA synthetase subunit beta 1506462..1508456 Aquifex aeolicus VF5 1193887 NP_214468.1 CDS ppsA NC_000918.1 1508458 1511028 D catalyzes the formation of phosphoenolpyruvate from pyruvate; phosphoenolpyruvate synthase 1508458..1511028 Aquifex aeolicus VF5 1193888 NP_214469.1 CDS aq_2144 NC_000918.1 1511025 1511921 D hypothetical protein 1511025..1511921 Aquifex aeolicus VF5 1193889 NP_214470.1 CDS aq_2145 NC_000918.1 1511921 1512571 D hypothetical protein 1511921..1512571 Aquifex aeolicus VF5 1193890 NP_214471.1 CDS aq_2146 NC_000918.1 1512591 1514669 D hypothetical protein 1512591..1514669 Aquifex aeolicus VF5 1193891 NP_214472.1 CDS pal NC_000918.1 1514666 1515277 R peptidoglycan associated lipoprotein complement(1514666..1515277) Aquifex aeolicus VF5 1193892 NP_214473.1 CDS gatC NC_000918.1 1515575 1515859 D glutamyl-tRNA (Gln) amidotransferase subunit C 1515575..1515859 Aquifex aeolicus VF5 1193893 NP_214474.1 CDS recA NC_000918.1 1515870 1516907 D catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 1515870..1516907 Aquifex aeolicus VF5 1193894 NP_214475.1 CDS pilU NC_000918.1 1516861 1517973 D twitching mobility protein 1516861..1517973 Aquifex aeolicus VF5 1193895 NP_214476.1 CDS cmk NC_000918.1 1517970 1518638 D cytidylate kinase 1517970..1518638 Aquifex aeolicus VF5 1193896 NP_214477.1 CDS pgsA1 NC_000918.1 1518607 1519143 D phosphotidylglycerophosphate synthase 1518607..1519143 Aquifex aeolicus VF5 1193897 NP_214478.1 CDS recJ NC_000918.1 1519140 1520756 D ssDNA-specific exonuclease RecJ 1519140..1520756 Aquifex aeolicus VF5 1193898 NP_214479.1 CDS aq_2157 NC_000918.1 1520800 1521225 D hypothetical protein 1520800..1521225 Aquifex aeolicus VF5 1193899 NP_214480.1 CDS pcnB2 NC_000918.1 1521202 1522740 R poly A polymerase complement(1521202..1522740) Aquifex aeolicus VF5 1193900 NP_214481.1 CDS aq_2159 NC_000918.1 1522790 1523365 D hypothetical protein 1522790..1523365 Aquifex aeolicus VF5 1193901 NP_214482.1 CDS abcT9 NC_000918.1 1523352 1524107 D ABC transporter 1523352..1524107 Aquifex aeolicus VF5 1193902 NP_214483.1 CDS uraP NC_000918.1 1524118 1524744 D uracil phosphoribosyltransferase 1524118..1524744 Aquifex aeolicus VF5 1193903 NP_214484.1 CDS aq_2164 NC_000918.1 1524721 1525290 R hypothetical protein complement(1524721..1525290) Aquifex aeolicus VF5 1193904 NP_214485.1 CDS aq_2165 NC_000918.1 1525297 1526034 R hypothetical protein complement(1525297..1526034) Aquifex aeolicus VF5 1193905 NP_214486.1 CDS scbA NC_000918.1 1526027 1526899 R adhesion protein complement(1526027..1526899) Aquifex aeolicus VF5 1193906 NP_214487.1 CDS aq_2168 NC_000918.1 1526912 1528321 R hypothetical protein complement(1526912..1528321) Aquifex aeolicus VF5 1193907 NP_214488.1 CDS aq_2170 NC_000918.1 1528662 1529381 D hypothetical protein 1528662..1529381 Aquifex aeolicus VF5 1193908 NP_214489.1 CDS aq_2171 NC_000918.1 1529365 1529856 D hypothetical protein 1529365..1529856 Aquifex aeolicus VF5 1193909 NP_214490.1 CDS aq_2172 NC_000918.1 1529849 1530346 D hypothetical protein 1529849..1530346 Aquifex aeolicus VF5 1193910 NP_214491.1 CDS aq_2173 NC_000918.1 1530315 1530749 D hypothetical protein 1530315..1530749 Aquifex aeolicus VF5 1193911 NP_214492.1 CDS ihfB NC_000918.1 1530746 1531048 D integration host factor subunit beta 1530746..1531048 Aquifex aeolicus VF5 1193912 NP_214493.1 CDS aq_2175 NC_000918.1 1531150 1532115 D hypothetical protein 1531150..1532115 Aquifex aeolicus VF5 1193913 NP_214494.1 CDS aroK NC_000918.1 1532112 1532618 D shikimate kinase 1532112..1532618 Aquifex aeolicus VF5 1193914 NP_214495.1 CDS thiG NC_000918.1 1532586 1533389 R functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase complement(1532586..1533389) Aquifex aeolicus VF5 1193915 YP_008920738.1 CDS aq_2178a NC_000918.1 1533411 1533620 R sulfur carrier protein ThiS complement(1533411..1533620) Aquifex aeolicus VF5 17925357 NP_214496.1 CDS acrR2 NC_000918.1 1533662 1534240 D TetR/AcrR family transcriptional regulator 1533662..1534240 Aquifex aeolicus VF5 1193916 NP_214497.1 CDS moaE NC_000918.1 1534286 1534750 D molybdopterin converting factor subunit 2 1534286..1534750 Aquifex aeolicus VF5 1193917 NP_214498.1 CDS moaA NC_000918.1 1534728 1535690 D molybdenum cofactor biosynthesis protein A 1534728..1535690 Aquifex aeolicus VF5 1193918 NP_214499.1 CDS aq_2185 NC_000918.1 1535687 1536265 R hypothetical protein complement(1535687..1536265) Aquifex aeolicus VF5 1193919 NP_214500.1 CDS sqr NC_000918.1 1536349 1537641 R sulfide-quinone reductase complement(1536349..1537641) Aquifex aeolicus VF5 1193920 NP_214501.1 CDS coxC NC_000918.1 1537820 1538596 D cytochrome C oxidase subunit III 1537820..1538596 Aquifex aeolicus VF5 1193921 NP_214502.1 CDS aq_2189 NC_000918.1 1538598 1539395 D hypothetical protein 1538598..1539395 Aquifex aeolicus VF5 1193983 NP_214503.1 CDS coxB NC_000918.1 1539398 1540108 D cytochrome C oxidase subunit II 1539398..1540108 Aquifex aeolicus VF5 1193984 NP_214506.1 CDS coxA2 NC_000918.1 1542541 1544319 D cytochrome C oxidase subunit I 1542541..1544319 Aquifex aeolicus VF5 1193987 NP_214507.1 CDS aq_2194 NC_000918.1 1544316 1545014 D hypothetical protein 1544316..1545014 Aquifex aeolicus VF5 1193988 NP_214508.1 CDS bacA NC_000918.1 1544990 1545760 R undecaprenol kinase complement(1544990..1545760) Aquifex aeolicus VF5 1193989 NP_214509.1 CDS aq_2196 NC_000918.1 1545764 1546519 R hypothetical protein complement(1545764..1546519) Aquifex aeolicus VF5 1193990 NP_214510.1 CDS aq_2197 NC_000918.1 1546519 1547007 R hypothetical protein complement(1546519..1547007) Aquifex aeolicus VF5 1193991 NP_214511.1 CDS mopB NC_000918.1 1547212 1547580 D hypothetical protein 1547212..1547580 Aquifex aeolicus VF5 1193992 NP_214512.1 CDS groEL NC_000918.1 1547532 1549169 D 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL 1547532..1549169 Aquifex aeolicus VF5 1193993 NP_214513.1 CDS aq_2203 NC_000918.1 1549193 1549831 R hypothetical protein complement(1549193..1549831) Aquifex aeolicus VF5 1193994 NP_214514.1 CDS ymxG NC_000918.1 1549833 1551092 R processing protease complement(1549833..1551092) Aquifex aeolicus VF5 1193995 NP_046399.1 CDS aq_aa03 NC_001880.1 1140 1574 D hypothetical protein 1140..1574 Aquifex aeolicus VF5 1192451 NP_046400.1 CDS aq_aa04 NC_001880.1 1711 2235 D hypothetical protein 1711..2235 Aquifex aeolicus VF5 1192452 NP_046401.1 CDS aq_aa05 NC_001880.1 2254 3174 D hypothetical protein 2254..3174 Aquifex aeolicus VF5 1192453 NP_046402.1 CDS aq_aa07 NC_001880.1 4111 5064 D hypothetical protein 4111..5064 Aquifex aeolicus VF5 1192454 NP_046403.1 CDS aq_aa09 NC_001880.1 5877 6824 D integrase protein 5877..6824 Aquifex aeolicus VF5 1192455 NP_046404.1 CDS aq_aa10 NC_001880.1 7395 7979 D hypothetical protein 7395..7979 Aquifex aeolicus VF5 1192456 NP_046405.1 CDS aq_aa11 NC_001880.1 8785 9741 D hypothetical protein 8785..9741 Aquifex aeolicus VF5 1192457 NP_046407.1 CDS aq_aa15 NC_001880.1 11078 11410 R hypothetical protein complement(11078..11410) Aquifex aeolicus VF5 1192459 NP_046408.1 CDS aq_aa17 NC_001880.1 11814 12860 D hypothetical protein 11814..12860 Aquifex aeolicus VF5 1192460 NP_046409.1 CDS aq_aa18 NC_001880.1 12951 13616 R hypothetical protein complement(12951..13616) Aquifex aeolicus VF5 1192461 NP_046410.1 CDS aq_aa19 NC_001880.1 15620 15958 R hypothetical protein complement(15620..15958) Aquifex aeolicus VF5 1192462 NP_046411.1 CDS aq_aa20 NC_001880.1 16475 17431 R hypothetical protein complement(16475..17431) Aquifex aeolicus VF5 1192463 NP_046412.1 CDS aq_aa21 NC_001880.1 17567 18208 D hypothetical protein 17567..18208 Aquifex aeolicus VF5 1192464 NP_046413.1 CDS aq_aa22 NC_001880.1 18282 18800 D hypothetical protein 18282..18800 Aquifex aeolicus VF5 1192465 NP_046414.1 CDS aq_aa23 NC_001880.1 18855 19670 D hypothetical protein 18855..19670 Aquifex aeolicus VF5 1192466 NP_046415.1 CDS aq_aa24 NC_001880.1 19683 20048 R hypothetical protein complement(19683..20048) Aquifex aeolicus VF5 1192467 NP_046416.1 CDS aq_aa25 NC_001880.1 21713 22333 R hypothetical protein complement(21713..22333) Aquifex aeolicus VF5 1192468 NP_046417.1 CDS aq_aa26 NC_001880.1 24247 24828 R hypothetical protein complement(24247..24828) Aquifex aeolicus VF5 1192469 NP_046418.1 CDS aq_aa27 NC_001880.1 24782 25561 R hypothetical protein complement(24782..25561) Aquifex aeolicus VF5 1192470 NP_046419.1 CDS aq_aa28 NC_001880.1 25741 26196 R hypothetical protein complement(25741..26196) Aquifex aeolicus VF5 1192471 NP_046420.1 CDS aq_aa29 NC_001880.1 26335 27105 R hypothetical protein complement(26335..27105) Aquifex aeolicus VF5 1192472 NP_046421.1 CDS aq_aa31 NC_001880.1 27142 27954 R hypothetical protein complement(27142..27954) Aquifex aeolicus VF5 1192473 NP_046422.1 CDS aq_aa32 NC_001880.1 28405 28995 R hypothetical protein complement(28405..28995) Aquifex aeolicus VF5 1192474 NP_046423.1 CDS aq_aa34 NC_001880.1 30009 30965 D hypothetical protein 30009..30965 Aquifex aeolicus VF5 1192475 NP_046424.1 CDS aq_aa35 NC_001880.1 31205 31846 R hypothetical protein complement(31205..31846) Aquifex aeolicus VF5 1192476 NP_046425.1 CDS aq_aa37 NC_001880.1 33210 33650 D hypothetical protein 33210..33650 Aquifex aeolicus VF5 1192477 NP_046426.1 CDS aq_aa38 NC_001880.1 33892 34854 D hypothetical protein 33892..34854 Aquifex aeolicus VF5 1192478 NP_046427.1 CDS aq_aa39 NC_001880.1 35238 35933 R hypothetical protein complement(35238..35933) Aquifex aeolicus VF5 1192479 NP_046428.1 CDS aq_aa40 NC_001880.1 37072 38037 R hypothetical protein complement(37072..38037) Aquifex aeolicus VF5 1192480 aq_t01 tRNA aq_t01 NC_000918.1 168875 168963 D tRNA-Ser 168875..168963 Aquifex aeolicus VF5 3284548 aq_t02 tRNA aq_t02 NC_000918.1 215844 215928 D tRNA-Leu 215844..215928 Aquifex aeolicus VF5 3284524 aq_t03 tRNA aq_t03 NC_000918.1 217784 217855 D tRNA-Gly 217784..217855 Aquifex aeolicus VF5 3284571 aq_t04 tRNA aq_t04 NC_000918.1 217867 217938 D tRNA-Cys 217867..217938 Aquifex aeolicus VF5 3284570 aq_t05 tRNA aq_t05 NC_000918.1 296990 297061 R tRNA-Gly complement(296990..297061) Aquifex aeolicus VF5 3284549 aq_t06 tRNA aq_t06 NC_000918.1 383315 383386 R tRNA-Thr complement(383315..383386) Aquifex aeolicus VF5 3284569 aq_t07 tRNA aq_t07 NC_000918.1 403089 403162 D tRNA-Ile 403089..403162 Aquifex aeolicus VF5 3284561 aq_t08 tRNA aq_t08 NC_000918.1 443927 444000 R tRNA-Arg complement(443927..444000) Aquifex aeolicus VF5 3284543 aq_t09 tRNA aq_t09 NC_000918.1 450408 450480 R tRNA-Phe complement(450408..450480) Aquifex aeolicus VF5 3284568 aq_t10 tRNA aq_t10 NC_000918.1 552612 552684 D tRNA-Pro 552612..552684 Aquifex aeolicus VF5 3284527 aq_t11 tRNA aq_t11 NC_000918.1 570932 571004 R tRNA-Ala complement(570932..571004) Aquifex aeolicus VF5 3284522 aq_t12 tRNA aq_t12 NC_000918.1 571021 571094 R tRNA-Ile complement(571021..571094) Aquifex aeolicus VF5 3284531 aq_t13 tRNA aq_t13 NC_000918.1 601711 601801 R tRNA-Leu complement(601711..601801) Aquifex aeolicus VF5 3284525 aq_t14 tRNA aq_t14 NC_000918.1 619914 619987 R tRNA-Arg complement(619914..619987) Aquifex aeolicus VF5 3284526 aq_t15 tRNA aq_t15 NC_000918.1 643595 643683 R tRNA-Ser complement(643595..643683) Aquifex aeolicus VF5 3284523 aq_t16 tRNA aq_t16 NC_000918.1 727371 727465 D tRNA-Sec 727371..727465 Aquifex aeolicus VF5 3284552 aq_t17 tRNA aq_t17 NC_000918.1 730604 730676 R tRNA-Val complement(730604..730676) Aquifex aeolicus VF5 3284553 aq_t18 tRNA aq_t18 NC_000918.1 844146 844230 R tRNA-Leu complement(844146..844230) Aquifex aeolicus VF5 3284550 aq_t19 tRNA aq_t19 NC_000918.1 861906 861978 R tRNA-Met complement(861906..861978) Aquifex aeolicus VF5 3284551 aq_t20 tRNA aq_t20 NC_000918.1 898302 898385 R tRNA-Leu complement(898302..898385) Aquifex aeolicus VF5 3284556 aq_t21 tRNA aq_t21 NC_000918.1 955412 955495 R tRNA-Leu complement(955412..955495) Aquifex aeolicus VF5 3284554 aq_t22 tRNA aq_t22 NC_000918.1 970381 970454 D tRNA-Met 970381..970454 Aquifex aeolicus VF5 3284544 aq_t23 tRNA aq_t23 NC_000918.1 972005 972094 D tRNA-Ser 972005..972094 Aquifex aeolicus VF5 3284545 aq_t24 tRNA aq_t24 NC_000918.1 1050475 1050547 D tRNA-Asn 1050475..1050547 Aquifex aeolicus VF5 3284572 aq_t25 tRNA aq_t25 NC_000918.1 1147765 1147837 R tRNA-Gln complement(1147765..1147837) Aquifex aeolicus VF5 3284546 aq_t26 tRNA aq_t26 NC_000918.1 1174311 1174383 R tRNA-Pro complement(1174311..1174383) Aquifex aeolicus VF5 3284538 aq_t27 tRNA aq_t27 NC_000918.1 1193760 1193833 D tRNA-Ile 1193760..1193833 Aquifex aeolicus VF5 3284534 aq_t28 tRNA aq_t28 NC_000918.1 1193850 1193922 D tRNA-Ala 1193850..1193922 Aquifex aeolicus VF5 3284535 aq_t29 tRNA aq_t29 NC_000918.1 1197109 1197182 D tRNA-Arg 1197109..1197182 Aquifex aeolicus VF5 3284532 aq_t30 tRNA aq_t30 NC_000918.1 1231223 1231312 R tRNA-Ser complement(1231223..1231312) Aquifex aeolicus VF5 3284539 aq_t31 tRNA aq_t31 NC_000918.1 1242836 1242908 R tRNA-Lys complement(1242836..1242908) Aquifex aeolicus VF5 3284540 aq_t32 tRNA aq_t32 NC_000918.1 1242937 1243010 R tRNA-Arg complement(1242937..1243010) Aquifex aeolicus VF5 3284541 aq_t33 tRNA aq_t33 NC_000918.1 1245134 1245206 D tRNA-His 1245134..1245206 Aquifex aeolicus VF5 3284542 aq_t34 tRNA aq_t34 NC_000918.1 1356480 1356552 D tRNA-Thr 1356480..1356552 Aquifex aeolicus VF5 3284564 aq_t35 tRNA aq_t35 NC_000918.1 1356575 1356659 D tRNA-Tyr 1356575..1356659 Aquifex aeolicus VF5 3284565 aq_t36 tRNA aq_t36 NC_000918.1 1356669 1356741 D tRNA-Gly 1356669..1356741 Aquifex aeolicus VF5 3284566 aq_t37 tRNA aq_t37 NC_000918.1 1356774 1356846 D tRNA-Thr 1356774..1356846 Aquifex aeolicus VF5 3284567 aq_t38 tRNA aq_t38 NC_000918.1 1358326 1358398 D tRNA-Trp 1358326..1358398 Aquifex aeolicus VF5 3284563 aq_t39 tRNA aq_t39 NC_000918.1 1376005 1376079 R tRNA-Asp complement(1376005..1376079) Aquifex aeolicus VF5 3284562 aq_t40 tRNA aq_t40 NC_000918.1 1452941 1453013 R tRNA-Val complement(1452941..1453013) Aquifex aeolicus VF5 3284559 aq_t41 tRNA aq_t41 NC_000918.1 1453038 1453112 R tRNA-Glu complement(1453038..1453112) Aquifex aeolicus VF5 3284560 aq_t42 tRNA aq_t42 NC_000918.1 1515350 1515422 R tRNA-Lys complement(1515350..1515422) Aquifex aeolicus VF5 3284557 aq_t43 tRNA aq_t43 NC_000918.1 1515439 1515511 R tRNA-Ala complement(1515439..1515511) Aquifex aeolicus VF5 3284558 aq_t44 tRNA aq_t44 NC_000918.1 1531052 1531124 R tRNA-Pro complement(1531052..1531124) Aquifex aeolicus VF5 3284555 aq_r01 rRNA aq_r01 NC_000918.1 567770 567889 R 5S ribosomal RNA complement(567770..567889) Aquifex aeolicus VF5 3284528 aq_r02 rRNA aq_r02 NC_000918.1 567929 570884 R 23S ribosomal RNA complement(567929..570884) Aquifex aeolicus VF5 3284529 aq_r03 rRNA aq_r03 NC_000918.1 571199 572785 R 16S ribosomal RNA complement(571199..572785) Aquifex aeolicus VF5 3284530 aq_r04 rRNA aq_r04 NC_000918.1 1192069 1193655 D 16S ribosomal RNA 1192069..1193655 Aquifex aeolicus VF5 3284533 aq_r05 rRNA aq_r05 NC_000918.1 1193970 1196925 D 23S ribosomal RNA 1193970..1196925 Aquifex aeolicus VF5 3284536 aq_r06 rRNA aq_r06 NC_000918.1 1196965 1197084 D 5S ribosomal RNA 1196965..1197084 Aquifex aeolicus VF5 3284537