-- dump date 20250216_233412 -- class Genbank::Contig -- table contig_comment -- id comment NZ_CP141259.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP141259.1.REFSEQ INFORMATION: The reference sequence is identical to CP141259.1. Bacteria and source DNA available from Shaanxi Key Laboratory ofREFSEQ INFORMATION: The reference sequence is identical to CP141259.1. Bacteria and source DNA available from Shaanxi Key Laboratory of Environmental Engineering.REFSEQ INFORMATION: The reference sequence is identical to CP141259.1. Bacteria and source DNA available from Shaanxi Key Laboratory of Environmental Engineering. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP141259.1. Bacteria and source DNA available from Shaanxi Key Laboratory of Environmental Engineering. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP141259.1. Bacteria and source DNA available from Shaanxi Key Laboratory of Environmental Engineering. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP141259.1. Bacteria and source DNA available from Shaanxi Key Laboratory of Environmental Engineering. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP141259.1. Bacteria and source DNA available from Shaanxi Key Laboratory of Environmental Engineering. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. V2.7.1; Unicycler v. v0.4.8;REFSEQ INFORMATION: The reference sequence is identical to CP141259.1. Bacteria and source DNA available from Shaanxi Key Laboratory of Environmental Engineering. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. V2.7.1; Unicycler v. v0.4.8; NECAT v. vLinuX-amd64; wtdbg2 v. v2.5;REFSEQ INFORMATION: The reference sequence is identical to CP141259.1. Bacteria and source DNA available from Shaanxi Key Laboratory of Environmental Engineering. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. V2.7.1; Unicycler v. v0.4.8; NECAT v. vLinuX-amd64; wtdbg2 v. v2.5; circlator v. v1.5.5REFSEQ INFORMATION: The reference sequence is identical to CP141259.1. Bacteria and source DNA available from Shaanxi Key Laboratory of Environmental Engineering. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. V2.7.1; Unicycler v. v0.4.8; NECAT v. vLinuX-amd64; wtdbg2 v. v2.5; circlator v. v1.5.5 Genome Representation :: FullREFSEQ INFORMATION: The reference sequence is identical to CP141259.1. Bacteria and source DNA available from Shaanxi Key Laboratory of Environmental Engineering. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. V2.7.1; Unicycler v. v0.4.8; NECAT v. vLinuX-amd64; wtdbg2 v. v2.5; circlator v. v1.5.5 Genome Representation :: Full Expected Final Version :: YesREFSEQ INFORMATION: The reference sequence is identical to CP141259.1. Bacteria and source DNA available from Shaanxi Key Laboratory of Environmental Engineering. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. V2.7.1; Unicycler v. v0.4.8; NECAT v. vLinuX-amd64; wtdbg2 v. v2.5; circlator v. v1.5.5 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 222.0xREFSEQ INFORMATION: The reference sequence is identical to CP141259.1. Bacteria and source DNA available from Shaanxi Key Laboratory of Environmental Engineering. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. V2.7.1; Unicycler v. v0.4.8; NECAT v. vLinuX-amd64; wtdbg2 v. v2.5; circlator v. v1.5.5 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 222.0x Sequencing Technology :: Illumina NovaSeq; PacBio SequelREFSEQ INFORMATION: The reference sequence is identical to CP141259.1. Bacteria and source DNA available from Shaanxi Key Laboratory of Environmental Engineering. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. V2.7.1; Unicycler v. v0.4.8; NECAT v. vLinuX-amd64; wtdbg2 v. v2.5; circlator v. v1.5.5 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 222.0x Sequencing Technology :: Illumina NovaSeq; PacBio Sequel ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP141259.1. Bacteria and source DNA available from Shaanxi Key Laboratory of Environmental Engineering. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. V2.7.1; Unicycler v. v0.4.8; NECAT v. vLinuX-amd64; wtdbg2 v. v2.5; circlator v. v1.5.5 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 222.0x Sequencing Technology :: Illumina NovaSeq; PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP141259.1. Bacteria and source DNA available from Shaanxi Key Laboratory of Environmental Engineering. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. V2.7.1; Unicycler v. v0.4.8; NECAT v. vLinuX-amd64; wtdbg2 v. v2.5; circlator v. v1.5.5 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 222.0x Sequencing Technology :: Illumina NovaSeq; PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP141259.1. Bacteria and source DNA available from Shaanxi Key Laboratory of Environmental Engineering. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. V2.7.1; Unicycler v. v0.4.8; NECAT v. vLinuX-amd64; wtdbg2 v. v2.5; circlator v. v1.5.5 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 222.0x Sequencing Technology :: Illumina NovaSeq; PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_045689615.1-RS_2024_12_05REFSEQ INFORMATION: The reference sequence is identical to CP141259.1. Bacteria and source DNA available from Shaanxi Key Laboratory of Environmental Engineering. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. V2.7.1; Unicycler v. v0.4.8; NECAT v. vLinuX-amd64; wtdbg2 v. v2.5; circlator v. v1.5.5 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 222.0x Sequencing Technology :: Illumina NovaSeq; PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_045689615.1-RS_2024_12_05 Annotation Date :: 12/05/2024 12:20:22REFSEQ INFORMATION: The reference sequence is identical to CP141259.1. Bacteria and source DNA available from Shaanxi Key Laboratory of Environmental Engineering. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. V2.7.1; Unicycler v. v0.4.8; NECAT v. vLinuX-amd64; wtdbg2 v. v2.5; circlator v. v1.5.5 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 222.0x Sequencing Technology :: Illumina NovaSeq; PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_045689615.1-RS_2024_12_05 Annotation Date :: 12/05/2024 12:20:22 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP141259.1. Bacteria and source DNA available from Shaanxi Key Laboratory of Environmental Engineering. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. V2.7.1; Unicycler v. v0.4.8; NECAT v. vLinuX-amd64; wtdbg2 v. v2.5; circlator v. v1.5.5 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 222.0x Sequencing Technology :: Illumina NovaSeq; PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_045689615.1-RS_2024_12_05 Annotation Date :: 12/05/2024 12:20:22 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP141259.1. Bacteria and source DNA available from Shaanxi Key Laboratory of Environmental Engineering. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. V2.7.1; Unicycler v. v0.4.8; NECAT v. vLinuX-amd64; wtdbg2 v. v2.5; circlator v. v1.5.5 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 222.0x Sequencing Technology :: Illumina NovaSeq; PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_045689615.1-RS_2024_12_05 Annotation Date :: 12/05/2024 12:20:22 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP141259.1. Bacteria and source DNA available from Shaanxi Key Laboratory of Environmental Engineering. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. V2.7.1; Unicycler v. v0.4.8; NECAT v. vLinuX-amd64; wtdbg2 v. v2.5; circlator v. v1.5.5 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 222.0x Sequencing Technology :: Illumina NovaSeq; PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_045689615.1-RS_2024_12_05 Annotation Date :: 12/05/2024 12:20:22 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP141259.1. Bacteria and source DNA available from Shaanxi Key Laboratory of Environmental Engineering. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. V2.7.1; Unicycler v. v0.4.8; NECAT v. vLinuX-amd64; wtdbg2 v. v2.5; circlator v. v1.5.5 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 222.0x Sequencing Technology :: Illumina NovaSeq; PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_045689615.1-RS_2024_12_05 Annotation Date :: 12/05/2024 12:20:22 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9REFSEQ INFORMATION: The reference sequence is identical to CP141259.1. Bacteria and source DNA available from Shaanxi Key Laboratory of Environmental Engineering. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. V2.7.1; Unicycler v. v0.4.8; NECAT v. vLinuX-amd64; wtdbg2 v. v2.5; circlator v. v1.5.5 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 222.0x Sequencing Technology :: Illumina NovaSeq; PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_045689615.1-RS_2024_12_05 Annotation Date :: 12/05/2024 12:20:22 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP141259.1. Bacteria and source DNA available from Shaanxi Key Laboratory of Environmental Engineering. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. V2.7.1; Unicycler v. v0.4.8; NECAT v. vLinuX-amd64; wtdbg2 v. v2.5; circlator v. v1.5.5 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 222.0x Sequencing Technology :: Illumina NovaSeq; PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_045689615.1-RS_2024_12_05 Annotation Date :: 12/05/2024 12:20:22 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,058REFSEQ INFORMATION: The reference sequence is identical to CP141259.1. Bacteria and source DNA available from Shaanxi Key Laboratory of Environmental Engineering. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. V2.7.1; Unicycler v. v0.4.8; NECAT v. vLinuX-amd64; wtdbg2 v. v2.5; circlator v. v1.5.5 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 222.0x Sequencing Technology :: Illumina NovaSeq; PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_045689615.1-RS_2024_12_05 Annotation Date :: 12/05/2024 12:20:22 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,058 CDSs (total) :: 4,984REFSEQ INFORMATION: The reference sequence is identical to CP141259.1. Bacteria and source DNA available from Shaanxi Key Laboratory of Environmental Engineering. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. V2.7.1; Unicycler v. v0.4.8; NECAT v. vLinuX-amd64; wtdbg2 v. v2.5; circlator v. v1.5.5 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 222.0x Sequencing Technology :: Illumina NovaSeq; PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_045689615.1-RS_2024_12_05 Annotation Date :: 12/05/2024 12:20:22 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,058 CDSs (total) :: 4,984 Genes (coding) :: 4,957REFSEQ INFORMATION: The reference sequence is identical to CP141259.1. Bacteria and source DNA available from Shaanxi Key Laboratory of Environmental Engineering. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. V2.7.1; Unicycler v. v0.4.8; NECAT v. vLinuX-amd64; wtdbg2 v. v2.5; circlator v. v1.5.5 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 222.0x Sequencing Technology :: Illumina NovaSeq; PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_045689615.1-RS_2024_12_05 Annotation Date :: 12/05/2024 12:20:22 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,058 CDSs (total) :: 4,984 Genes (coding) :: 4,957 CDSs (with protein) :: 4,957REFSEQ INFORMATION: The reference sequence is identical to CP141259.1. Bacteria and source DNA available from Shaanxi Key Laboratory of Environmental Engineering. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. V2.7.1; Unicycler v. v0.4.8; NECAT v. vLinuX-amd64; wtdbg2 v. v2.5; circlator v. v1.5.5 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 222.0x Sequencing Technology :: Illumina NovaSeq; PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_045689615.1-RS_2024_12_05 Annotation Date :: 12/05/2024 12:20:22 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,058 CDSs (total) :: 4,984 Genes (coding) :: 4,957 CDSs (with protein) :: 4,957 Genes (RNA) :: 74REFSEQ INFORMATION: The reference sequence is identical to CP141259.1. Bacteria and source DNA available from Shaanxi Key Laboratory of Environmental Engineering. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. V2.7.1; Unicycler v. v0.4.8; NECAT v. vLinuX-amd64; wtdbg2 v. v2.5; circlator v. v1.5.5 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 222.0x Sequencing Technology :: Illumina NovaSeq; PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_045689615.1-RS_2024_12_05 Annotation Date :: 12/05/2024 12:20:22 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,058 CDSs (total) :: 4,984 Genes (coding) :: 4,957 CDSs (with protein) :: 4,957 Genes (RNA) :: 74 rRNAs :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP141259.1. Bacteria and source DNA available from Shaanxi Key Laboratory of Environmental Engineering. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. V2.7.1; Unicycler v. v0.4.8; NECAT v. vLinuX-amd64; wtdbg2 v. v2.5; circlator v. v1.5.5 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 222.0x Sequencing Technology :: Illumina NovaSeq; PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_045689615.1-RS_2024_12_05 Annotation Date :: 12/05/2024 12:20:22 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,058 CDSs (total) :: 4,984 Genes (coding) :: 4,957 CDSs (with protein) :: 4,957 Genes (RNA) :: 74 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP141259.1. Bacteria and source DNA available from Shaanxi Key Laboratory of Environmental Engineering. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. V2.7.1; Unicycler v. v0.4.8; NECAT v. vLinuX-amd64; wtdbg2 v. v2.5; circlator v. v1.5.5 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 222.0x Sequencing Technology :: Illumina NovaSeq; PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_045689615.1-RS_2024_12_05 Annotation Date :: 12/05/2024 12:20:22 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,058 CDSs (total) :: 4,984 Genes (coding) :: 4,957 CDSs (with protein) :: 4,957 Genes (RNA) :: 74 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 59REFSEQ INFORMATION: The reference sequence is identical to CP141259.1. Bacteria and source DNA available from Shaanxi Key Laboratory of Environmental Engineering. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. V2.7.1; Unicycler v. v0.4.8; NECAT v. vLinuX-amd64; wtdbg2 v. v2.5; circlator v. v1.5.5 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 222.0x Sequencing Technology :: Illumina NovaSeq; PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_045689615.1-RS_2024_12_05 Annotation Date :: 12/05/2024 12:20:22 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,058 CDSs (total) :: 4,984 Genes (coding) :: 4,957 CDSs (with protein) :: 4,957 Genes (RNA) :: 74 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 59 ncRNAs :: 3REFSEQ INFORMATION: The reference sequence is identical to CP141259.1. Bacteria and source DNA available from Shaanxi Key Laboratory of Environmental Engineering. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. V2.7.1; Unicycler v. v0.4.8; NECAT v. vLinuX-amd64; wtdbg2 v. v2.5; circlator v. v1.5.5 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 222.0x Sequencing Technology :: Illumina NovaSeq; PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_045689615.1-RS_2024_12_05 Annotation Date :: 12/05/2024 12:20:22 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,058 CDSs (total) :: 4,984 Genes (coding) :: 4,957 CDSs (with protein) :: 4,957 Genes (RNA) :: 74 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 59 ncRNAs :: 3 Pseudo Genes (total) :: 27REFSEQ INFORMATION: The reference sequence is identical to CP141259.1. Bacteria and source DNA available from Shaanxi Key Laboratory of Environmental Engineering. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. V2.7.1; Unicycler v. v0.4.8; NECAT v. vLinuX-amd64; wtdbg2 v. v2.5; circlator v. v1.5.5 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 222.0x Sequencing Technology :: Illumina NovaSeq; PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_045689615.1-RS_2024_12_05 Annotation Date :: 12/05/2024 12:20:22 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,058 CDSs (total) :: 4,984 Genes (coding) :: 4,957 CDSs (with protein) :: 4,957 Genes (RNA) :: 74 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 59 ncRNAs :: 3 Pseudo Genes (total) :: 27 CDSs (without protein) :: 27REFSEQ INFORMATION: The reference sequence is identical to CP141259.1. Bacteria and source DNA available from Shaanxi Key Laboratory of Environmental Engineering. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. V2.7.1; Unicycler v. v0.4.8; NECAT v. vLinuX-amd64; wtdbg2 v. v2.5; circlator v. v1.5.5 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 222.0x Sequencing Technology :: Illumina NovaSeq; PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_045689615.1-RS_2024_12_05 Annotation Date :: 12/05/2024 12:20:22 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,058 CDSs (total) :: 4,984 Genes (coding) :: 4,957 CDSs (with protein) :: 4,957 Genes (RNA) :: 74 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 59 ncRNAs :: 3 Pseudo Genes (total) :: 27 CDSs (without protein) :: 27 Pseudo Genes (ambiguous residues) :: 0 of 27REFSEQ INFORMATION: The reference sequence is identical to CP141259.1. Bacteria and source DNA available from Shaanxi Key Laboratory of Environmental Engineering. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. V2.7.1; Unicycler v. v0.4.8; NECAT v. vLinuX-amd64; wtdbg2 v. v2.5; circlator v. v1.5.5 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 222.0x Sequencing Technology :: Illumina NovaSeq; PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_045689615.1-RS_2024_12_05 Annotation Date :: 12/05/2024 12:20:22 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,058 CDSs (total) :: 4,984 Genes (coding) :: 4,957 CDSs (with protein) :: 4,957 Genes (RNA) :: 74 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 59 ncRNAs :: 3 Pseudo Genes (total) :: 27 CDSs (without protein) :: 27 Pseudo Genes (ambiguous residues) :: 0 of 27 Pseudo Genes (frameshifted) :: 7 of 27REFSEQ INFORMATION: The reference sequence is identical to CP141259.1. Bacteria and source DNA available from Shaanxi Key Laboratory of Environmental Engineering. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. V2.7.1; Unicycler v. v0.4.8; NECAT v. vLinuX-amd64; wtdbg2 v. v2.5; circlator v. v1.5.5 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 222.0x Sequencing Technology :: Illumina NovaSeq; PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_045689615.1-RS_2024_12_05 Annotation Date :: 12/05/2024 12:20:22 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,058 CDSs (total) :: 4,984 Genes (coding) :: 4,957 CDSs (with protein) :: 4,957 Genes (RNA) :: 74 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 59 ncRNAs :: 3 Pseudo Genes (total) :: 27 CDSs (without protein) :: 27 Pseudo Genes (ambiguous residues) :: 0 of 27 Pseudo Genes (frameshifted) :: 7 of 27 Pseudo Genes (incomplete) :: 21 of 27REFSEQ INFORMATION: The reference sequence is identical to CP141259.1. Bacteria and source DNA available from Shaanxi Key Laboratory of Environmental Engineering. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. V2.7.1; Unicycler v. v0.4.8; NECAT v. vLinuX-amd64; wtdbg2 v. v2.5; circlator v. v1.5.5 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 222.0x Sequencing Technology :: Illumina NovaSeq; PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_045689615.1-RS_2024_12_05 Annotation Date :: 12/05/2024 12:20:22 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,058 CDSs (total) :: 4,984 Genes (coding) :: 4,957 CDSs (with protein) :: 4,957 Genes (RNA) :: 74 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 59 ncRNAs :: 3 Pseudo Genes (total) :: 27 CDSs (without protein) :: 27 Pseudo Genes (ambiguous residues) :: 0 of 27 Pseudo Genes (frameshifted) :: 7 of 27 Pseudo Genes (incomplete) :: 21 of 27 Pseudo Genes (internal stop) :: 6 of 27REFSEQ INFORMATION: The reference sequence is identical to CP141259.1. Bacteria and source DNA available from Shaanxi Key Laboratory of Environmental Engineering. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. V2.7.1; Unicycler v. v0.4.8; NECAT v. vLinuX-amd64; wtdbg2 v. v2.5; circlator v. v1.5.5 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 222.0x Sequencing Technology :: Illumina NovaSeq; PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_045689615.1-RS_2024_12_05 Annotation Date :: 12/05/2024 12:20:22 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,058 CDSs (total) :: 4,984 Genes (coding) :: 4,957 CDSs (with protein) :: 4,957 Genes (RNA) :: 74 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 59 ncRNAs :: 3 Pseudo Genes (total) :: 27 CDSs (without protein) :: 27 Pseudo Genes (ambiguous residues) :: 0 of 27 Pseudo Genes (frameshifted) :: 7 of 27 Pseudo Genes (incomplete) :: 21 of 27 Pseudo Genes (internal stop) :: 6 of 27 Pseudo Genes (multiple problems) :: 6 of 27REFSEQ INFORMATION: The reference sequence is identical to CP141259.1. Bacteria and source DNA available from Shaanxi Key Laboratory of Environmental Engineering. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. V2.7.1; Unicycler v. v0.4.8; NECAT v. vLinuX-amd64; wtdbg2 v. v2.5; circlator v. v1.5.5 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 222.0x Sequencing Technology :: Illumina NovaSeq; PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_045689615.1-RS_2024_12_05 Annotation Date :: 12/05/2024 12:20:22 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,058 CDSs (total) :: 4,984 Genes (coding) :: 4,957 CDSs (with protein) :: 4,957 Genes (RNA) :: 74 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 59 ncRNAs :: 3 Pseudo Genes (total) :: 27 CDSs (without protein) :: 27 Pseudo Genes (ambiguous residues) :: 0 of 27 Pseudo Genes (frameshifted) :: 7 of 27 Pseudo Genes (incomplete) :: 21 of 27 Pseudo Genes (internal stop) :: 6 of 27 Pseudo Genes (multiple problems) :: 6 of 27 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP141259.1. Bacteria and source DNA available from Shaanxi Key Laboratory of Environmental Engineering. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Flye v. V2.7.1; Unicycler v. v0.4.8; NECAT v. vLinuX-amd64; wtdbg2 v. v2.5; circlator v. v1.5.5 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 222.0x Sequencing Technology :: Illumina NovaSeq; PacBio Sequel ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_045689615.1-RS_2024_12_05 Annotation Date :: 12/05/2024 12:20:22 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,058 CDSs (total) :: 4,984 Genes (coding) :: 4,957 CDSs (with protein) :: 4,957 Genes (RNA) :: 74 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 59 ncRNAs :: 3 Pseudo Genes (total) :: 27 CDSs (without protein) :: 27 Pseudo Genes (ambiguous residues) :: 0 of 27 Pseudo Genes (frameshifted) :: 7 of 27 Pseudo Genes (incomplete) :: 21 of 27 Pseudo Genes (internal stop) :: 6 of 27 Pseudo Genes (multiple problems) :: 6 of 27 ##Genome-Annotation-Data-END## COMPLETENESS: full length.