-- dump date 20140618_210939 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_001419680.1 154684519 5463240 412..1752 1 NC_009725.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 1752 dnaA 5463240 dnaA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 chromosomal replication initiation protein YP_001419680.1 412 D 326423 CDS YP_001419681.1 154684520 5461743 1937..3073 1 NC_009725.1 binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 3073 dnaN 5461743 dnaN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DNA polymerase III subunit beta YP_001419681.1 1937 D 326423 CDS YP_001419682.1 154684521 5461744 3208..3423 1 NC_009725.1 conserved hypothetical protein YaaA; hypothetical protein 3423 yaaA 5461744 yaaA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419682.1 3208 D 326423 CDS YP_001419683.1 154684522 5461745 3439..4551 1 NC_009725.1 Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F 4551 recF 5461745 recF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 recombination protein F YP_001419683.1 3439 D 326423 CDS YP_001419684.1 154684523 5459841 4569..4814 1 NC_009725.1 hypothetical protein YaaB; hypothetical protein 4814 yaaB 5459841 yaaB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419684.1 4569 D 326423 CDS YP_001419685.1 154684524 5461732 4871..6787 1 NC_009725.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 6787 gyrB 5461732 gyrB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DNA gyrase subunit B YP_001419685.1 4871 D 326423 CDS YP_001419686.1 154684525 5461733 7081..9462 1 NC_009725.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 9462 gyrA 5461733 gyrA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DNA gyrase subunit A YP_001419686.1 7081 D 326423 CDS YP_001419687.1 154684526 5462526 complement(14626..15576) 1 NC_009725.1 hypothetical protein YaaC; hypothetical protein 15576 yaaC 5462526 yaaC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419687.1 14626 R 326423 CDS YP_001419688.1 154684527 5462527 15697..17163 1 NC_009725.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase 17163 guaB 5462527 guaB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 inosine 5'-monophosphate dehydrogenase YP_001419688.1 15697 D 326423 CDS YP_001419689.1 154684528 5462528 17316..18647 1 NC_009725.1 serine-type D-ala-D-ala carboxypeptidase DacA; DacA 18647 dacA 5462528 dacA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DacA YP_001419689.1 17316 D 326423 CDS YP_001419690.1 154684529 5462529 18845..19729 1 NC_009725.1 with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate; pyridoxal biosynthesis lyase PdxS 19729 pdxS 5462529 pdxS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 pyridoxal biosynthesis lyase PdxS YP_001419690.1 18845 D 326423 CDS YP_001419691.1 154684530 5460157 19751..20341 1 NC_009725.1 with PdxST is involved in the biosynthesis of pyridoxal 5'-phosphate; PdxT catalyzes the hydrolysis of glutamine to glutamate and ammonia; PdxS utilizes the ammonia to synthesize pyridoxal 5'-phosphate; glutamine amidotransferase subunit PdxT 20341 pdxT 5460157 pdxT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 glutamine amidotransferase subunit PdxT YP_001419691.1 19751 D 326423 CDS YP_001419692.1 154684531 5460158 20661..21938 1 NC_009725.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 21938 serS 5460158 serS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 seryl-tRNA synthetase YP_001419692.1 20661 D 326423 CDS YP_001419693.1 154684532 5460159 complement(21949..23094) 1 NC_009725.1 glycerate kinase GlxK; GlxK 23094 glxK 5460159 glxK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GlxK YP_001419693.1 21949 R 326423 CDS YP_001419694.1 154684533 5460161 complement(23535..24188) 1 NC_009725.1 deoxyadenosine/deoxycytidine kinase DcK; deoxyadenosine/deoxycytidine kinase 24188 dcK 5460161 dcK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 deoxyadenosine/deoxycytidine kinase YP_001419694.1 23535 R 326423 CDS YP_001419695.1 154684534 5461402 complement(24185..24808) 1 NC_009725.1 deoxyguanosine kinase Dgk; deoxyguanosine kinase 24808 dgk 5461402 dgk Bacillus amyloliquefaciens subsp. plantarum str. FZB42 deoxyguanosine kinase YP_001419695.1 24185 R 326423 CDS YP_001419696.1 154684535 5461403 complement(24904..26184) 1 NC_009725.1 hypothetical protein YaaH; hypothetical protein 26184 yaaH 5461403 yaaH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419696.1 24904 R 326423 CDS YP_001419697.1 154684536 5461404 complement(26259..26810) 1 NC_009725.1 isochorismatase homolog YaaI; hypothetical protein 26810 yaaI 5461404 yaaI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419697.1 26259 R 326423 CDS YP_001419698.1 154684537 5461405 26893..27375 1 NC_009725.1 cytidine/deoxycytidylate deaminase YaaJ; hypothetical protein 27375 yaaJ 5461405 yaaJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419698.1 26893 D 326423 CDS YP_001419699.1 154684538 5461407 27858..29549 1 NC_009725.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau 29549 dnaX 5461407 dnaX Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DNA polymerase III subunits gamma and tau YP_001419699.1 27858 D 326423 CDS YP_001419700.1 154684539 5459709 29568..29897 1 NC_009725.1 hypothetical protein YaaK; hypothetical protein 29897 yaaK 5459709 yaaK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419700.1 29568 D 326423 CDS YP_001419701.1 154684540 5459710 29912..30508 1 NC_009725.1 involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 30508 recR 5459710 recR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 recombination protein RecR YP_001419701.1 29912 D 326423 CDS YP_001419702.1 154684541 5459711 30527..30751 1 NC_009725.1 hypothetical protein YaaL; hypothetical protein 30751 yaaL 5459711 yaaL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419702.1 30527 D 326423 CDS YP_001419703.1 154684542 5459712 30812..31075 1 NC_009725.1 inhibitor of the pro-sigma-K processing machinery BofA; BofA 31075 bofA 5459712 bofA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 BofA YP_001419703.1 30812 D 326423 CDS YP_001419704.1 154684543 5459621 36321..36515 1 NC_009725.1 hypothetical protein CsfB; hypothetical protein 36515 csfB 5459621 csfB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419704.1 36321 D 326423 CDS YP_001419705.1 154684544 5459622 36663..37277 1 NC_009725.1 5-bromo 4-chloroindolyl phosphate (X-phos) hydrolysis protein XpaC; XpaC 37277 xpaC 5459622 xpaC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 XpaC YP_001419705.1 36663 D 326423 CDS YP_001419706.1 154684545 5459940 37293..38411 1 NC_009725.1 hypothetical protein YaaN; hypothetical protein 38411 yaaN 5459940 yaaN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419706.1 37293 D 326423 CDS YP_001419707.1 154684546 5459941 38489..39922 1 NC_009725.1 conserved hypothetical protein YaaO; hypothetical protein 39922 yaaO 5459941 yaaO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419707.1 38489 D 326423 CDS YP_001419708.1 154684547 5459942 39919..40557 1 NC_009725.1 catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase 40557 tmk 5459942 tmk Bacillus amyloliquefaciens subsp. plantarum str. FZB42 thymidylate kinase YP_001419708.1 39919 D 326423 CDS YP_001419709.1 154684548 5459943 40628..40957 1 NC_009725.1 conserved hypothetical protein YaaQ; hypothetical protein 40957 yaaQ 5459943 yaaQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419709.1 40628 D 326423 CDS YP_001419710.1 154684549 5459944 40970..41410 1 NC_009725.1 conserved hypothetical protein YaaR; hypothetical protein 41410 yaaR 5459944 yaaR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419710.1 40970 D 326423 CDS YP_001419711.1 154684550 5459945 41422..42411 1 NC_009725.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' 42411 holB 5459945 holB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DNA polymerase III subunit delta' YP_001419711.1 41422 D 326423 CDS YP_001419712.1 154684551 5461552 42414..43241 1 NC_009725.1 signal peptidase II homolog YaaT; hypothetical protein 43241 yaaT 5461552 yaaT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419712.1 42414 D 326423 CDS YP_001419713.1 154684552 5461553 43256..43615 1 NC_009725.1 in Bacillus subtilis this protein is involved in the negative regulation of DNA replication initiation; interacts with DnaN and DnaA; DNA replication intiation control protein YabA 43615 yabA 5461553 yabA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DNA replication intiation control protein YabA YP_001419713.1 43256 D 326423 CDS YP_001419714.1 154684553 5461554 43676..44419 1 NC_009725.1 conserved hypothetical protein YabB; hypothetical protein 44419 yabB 5461554 yabB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419714.1 43676 D 326423 CDS YP_001419715.1 154684554 5461555 44406..44705 1 NC_009725.1 conserved hypothetical protein YazA; GIY-YIG nuclease superfamily protein 44705 yazA 5461555 yazA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GIY-YIG nuclease superfamily protein YP_001419715.1 44406 D 326423 CDS YP_001419716.1 154684555 5461556 44680..45561 1 NC_009725.1 conserved hypothetical protein YabC; hypothetical protein 45561 yabC 5461556 yabC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419716.1 44680 D 326423 CDS YP_001419717.1 154684556 5461557 complement(45611..45895) 1 NC_009725.1 transition state regulator; COG2002; regulation of stationary/sporulation gene expression; transcriptional control of biofilm formation; hypothetical protein 45895 abrB 5461557 abrB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419717.1 45611 R 326423 CDS YP_001419718.1 154684557 5461779 46385..48376 1 NC_009725.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 48376 metS 5461779 metS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 methionyl-tRNA synthetase YP_001419718.1 46385 D 326423 CDS YP_001419719.1 154684558 5461780 48449..49219 1 NC_009725.1 deoxyribonuclease YabD; hypothetical protein 49219 yabD 5461780 yabD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419719.1 48449 D 326423 CDS YP_001419720.1 154684559 5461781 49318..50679 1 NC_009725.1 conserved hypothetical protein YabE; hypothetical protein 50679 yabE 5461781 yabE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419720.1 49318 D 326423 CDS YP_001419721.1 154684560 5461782 50814..51377 1 NC_009725.1 ribonuclease M5 RnmV; RnmV 51377 rnmV 5461782 rnmV Bacillus amyloliquefaciens subsp. plantarum str. FZB42 RnmV YP_001419721.1 50814 D 326423 CDS YP_001419722.1 154684561 5461783 51367..52248 1 NC_009725.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 52248 ksgA 5461783 ksgA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 dimethyladenosine transferase YP_001419722.1 51367 D 326423 CDS YP_001419723.1 154684562 5461784 52421..53296 1 NC_009725.1 sporulation specific peptidase YabG; hypothetical protein 53296 yabG 5461784 yabG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419723.1 52421 D 326423 CDS YP_001419724.1 154684563 5459663 53508..53768 1 NC_009725.1 conserved hypothetical protein Veg; hypothetical protein 53768 veg 5459663 veg Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419724.1 53508 D 326423 CDS YP_001419725.1 154684564 5459664 53931..54119 1 NC_009725.1 small acid-soluble spore protein (alpha/beta-type SASP) SspF; SspF 54119 sspF 5459664 sspF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SspF YP_001419725.1 53931 D 326423 CDS YP_001419726.1 154684565 5459665 54263..55132 1 NC_009725.1 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 55132 ipk 5459665 ipk Bacillus amyloliquefaciens subsp. plantarum str. FZB42 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_001419726.1 54263 D 326423 CDS YP_001419727.1 154684566 5459666 55188..56045 1 NC_009725.1 pur operon repressor PurR; pur operon repressor 56045 purR 5459666 purR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 pur operon repressor YP_001419727.1 55188 D 326423 CDS YP_001419728.1 154684567 5459667 56042..56422 1 NC_009725.1 conserved hypothetical protein YabJ; hypothetical protein 56422 yabJ 5459667 yabJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419728.1 56042 D 326423 CDS YP_001419729.1 154684568 5459668 56618..56911 1 NC_009725.1 stage V sporulation protein G; essential for spore formation and a negative regulator of asymmetric septation in Bacillus; involved in methicillin-resistance, biofilm formation and capsular polysaccharide synthesis in Staphylococcus; regulatory protein SpoVG 56911 spoVG 5459668 spoVG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 regulatory protein SpoVG YP_001419729.1 56618 D 326423 CDS YP_001419730.1 154684569 5462747 57103..58473 1 NC_009725.1 forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 58473 glmU 5462747 glmU Bacillus amyloliquefaciens subsp. plantarum str. FZB42 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase YP_001419730.1 57103 D 326423 CDS YP_001419731.1 154684570 5462748 58495..59448 1 NC_009725.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase 59448 prs 5462748 prs Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ribose-phosphate pyrophosphokinase YP_001419731.1 58495 D 326423 CDS YP_001419732.1 154684571 5462749 59533..60141 1 NC_009725.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25 60141 ctc 5462749 ctc Bacillus amyloliquefaciens subsp. plantarum str. FZB42 50S ribosomal protein L25 YP_001419732.1 59533 D 326423 CDS YP_001419733.1 154684572 5462750 60226..60792 1 NC_009725.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 60792 spoVC 5462750 spoVC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 peptidyl-tRNA hydrolase YP_001419733.1 60226 D 326423 CDS YP_001419734.1 154684573 5462751 60854..61084 1 NC_009725.1 hypothetical protein YabK; hypothetical protein 61084 yabK 5462751 yabK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419734.1 60854 D 326423 CDS YP_001419735.1 154684574 5463260 61154..64687 1 NC_009725.1 transcription-repair coupling factor Mfd; hypothetical protein 64687 mfd 5463260 mfd Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419735.1 61154 D 326423 CDS YP_001419736.1 154684575 5463261 64824..65360 1 NC_009725.1 stage V sporulation protein sSpoVT; SpoVT 65360 spoVT 5463261 spoVT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SpoVT YP_001419736.1 64824 D 326423 CDS YP_001419737.1 154684576 5463262 65529..67109 1 NC_009725.1 amino acid transport protein YabM; hypothetical protein 67109 yabM 5463262 yabM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419737.1 65529 D 326423 CDS YP_001419738.1 154684577 5463263 67099..68574 1 NC_009725.1 conserved hypothetical protein YabN; hypothetical protein 68574 yabN 5463263 yabN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419738.1 67099 D 326423 CDS YP_001419739.1 154684578 5463264 68576..68836 1 NC_009725.1 conserved hypothetical protein YabO; hypothetical protein 68836 yabO 5463264 yabO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419739.1 68576 D 326423 CDS YP_001419740.1 154684579 5462208 68915..69217 1 NC_009725.1 hypothetical protein YabP; hypothetical protein 69217 yabP 5462208 yabP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419740.1 68915 D 326423 CDS YP_001419741.1 154684580 5462209 69214..69849 1 NC_009725.1 hypothetical protein YabQ; hypothetical protein 69849 yabQ 5462209 yabQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419741.1 69214 D 326423 CDS YP_001419742.1 154684581 5462210 69867..70244 1 NC_009725.1 cell-division initiation protein DivIC; DivIC 70244 divIC 5462210 divIC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DivIC YP_001419742.1 69867 D 326423 CDS YP_001419743.1 154684582 5462211 70325..70711 1 NC_009725.1 polyribonucleotide nucleotidyltransferase YabR; hypothetical protein 70711 yabR 5462211 yabR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419743.1 70325 D 326423 CDS YP_001419744.1 154684583 5460849 71237..73726 1 NC_009725.1 sporulation stage II protein pSpoIIE; SpoIIE 73726 spoIIE 5460849 spoIIE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SpoIIE YP_001419744.1 71237 D 326423 CDS YP_001419745.1 154684584 5460850 73794..74531 1 NC_009725.1 hypothetical protein YabS; hypothetical protein 74531 yabS 5460850 yabS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419745.1 73794 D 326423 CDS YP_001419746.1 154684585 5459935 74497..75498 1 NC_009725.1 probable serine/threonine-protein kinase YabT; hypothetical protein 75498 yabT 5459935 yabT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419746.1 74497 D 326423 CDS YP_001419747.1 154684586 5459936 75603..77021 1 NC_009725.1 conserved hypothetical protein YacA; hypothetical protein 77021 yacA 5459936 yacA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419747.1 75603 D 326423 CDS YP_001419748.1 154684587 5459937 77018..77557 1 NC_009725.1 hypoxanthine-guanine phosphoribosyltransferase HprT; HprT 77557 hprT 5459937 hprT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 HprT YP_001419748.1 77018 D 326423 CDS YP_001419749.1 154684588 5459938 77655..79574 1 NC_009725.1 cell division protein and general stress protein(class III heat-shock protein) FtsH; hypothetical protein 79574 ftsH 5459938 ftsH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419749.1 77655 D 326423 CDS YP_001419750.1 154684589 5459939 79723..80499 1 NC_009725.1 type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase 80499 yacB 5459939 yacB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 pantothenate kinase YP_001419750.1 79723 D 326423 CDS YP_001419751.1 154684590 5462548 80510..81385 1 NC_009725.1 becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers; Hsp33-like chaperonin 81385 hslO 5462548 hslO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 Hsp33-like chaperonin YP_001419751.1 80510 D 326423 CDS YP_001419752.1 154684591 5462549 81431..82321 1 NC_009725.1 protein secretion protein prsA homolog YacD; hypothetical protein 82321 yacD 5462549 yacD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419752.1 81431 D 326423 CDS YP_001419753.1 154684592 5462550 82397..83323 1 NC_009725.1 cysteine synthetase A CysK; hypothetical protein 83323 cysK 5462550 cysK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419753.1 82397 D 326423 CDS YP_001419754.1 154684593 5462551 83488..84903 1 NC_009725.1 para-aminobenzoate synthase chain A PabB; PabB 84903 pabB 5462551 pabB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 PabB YP_001419754.1 83488 D 326423 CDS YP_001419755.1 154684594 5462552 84919..85506 1 NC_009725.1 amphibolic enzyme subunit from Bacillus subtilis performs both in anthranilate and para-aminobenzoate synthesis; para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II 85506 pabA 5462552 pabA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II YP_001419755.1 84919 D 326423 CDS YP_001419756.1 154684595 5462300 85503..86387 1 NC_009725.1 catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate; 4-amino-4-deoxychorismate lyase 86387 pabC 5462300 pabC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 4-amino-4-deoxychorismate lyase YP_001419756.1 85503 D 326423 CDS YP_001419757.1 154684596 5462301 86368..87225 1 NC_009725.1 dihydropteroate synthase Sul; Sul 87225 sul 5462301 sul Bacillus amyloliquefaciens subsp. plantarum str. FZB42 Sul YP_001419757.1 86368 D 326423 CDS YP_001419758.1 154684597 5462302 87218..87580 1 NC_009725.1 dihydroneopterin aldolase FolA; hypothetical protein 87580 folA 5462302 folA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419758.1 87218 D 326423 CDS YP_001419759.1 154684598 5462303 87577..88080 1 NC_009725.1 7,8-dihydro-6-hydroxymethylpterin pyrophosphokinase FolK; hypothetical protein 88080 folK 5462303 folK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419759.1 87577 D 326423 CDS YP_001419760.1 154684599 5462304 88263..89264 1 NC_009725.1 probable tRNA-dihydrouridine synthase I YacF; hypothetical protein 89264 yacF 5462304 yacF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419760.1 88263 D 326423 CDS YP_001419761.1 154684600 5460180 89354..90853 1 NC_009725.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 90853 lysS 5460180 lysS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 lysyl-tRNA synthetase YP_001419761.1 89354 D 326423 CDS YP_001419762.1 154684601 5459805 102172..102636 1 NC_009725.1 transcriptional regulator CtsR; hypothetical protein 102636 ctsR 5459805 ctsR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419762.1 102172 D 326423 CDS YP_001419763.1 154684602 5459806 102650..103207 1 NC_009725.1 modulation of CtsR repression protein McsA; McsA 103207 mcsA 5459806 mcsA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 McsA YP_001419763.1 102650 D 326423 CDS YP_001419764.1 154684603 5459807 103207..104298 1 NC_009725.1 modulation of CtsR repressionprotein McsB; ATP:guanido phosphotransferase 104298 mcsB 5459807 mcsB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ATP:guanido phosphotransferase YP_001419764.1 103207 D 326423 CDS YP_001419765.1 154684604 5459808 104295..106727 1 NC_009725.1 class III stress response-related ATPase ClpC; ClpC 106727 clpC 5459808 clpC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ClpC YP_001419765.1 104295 D 326423 CDS YP_001419766.1 154684605 5460282 106822..108201 1 NC_009725.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 108201 radA 5460282 radA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DNA repair protein RadA YP_001419766.1 106822 D 326423 CDS YP_001419767.1 154684606 5460283 108205..109287 1 NC_009725.1 non-specific DNA-binding; scans chromosomes during sporulation for DNA-damage; delays initiation of sporulation; participates in a checkpoint signaling cascade for cell-cycle progression and DNA repair; DNA integrity scanning protein DisA 109287 yacK 5460283 yacK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DNA integrity scanning protein DisA YP_001419767.1 108205 D 326423 CDS YP_001419768.1 154684607 5460284 109401..110501 1 NC_009725.1 conserved hypothetical protein YacL; hypothetical protein 110501 yacL 5460284 yacL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419768.1 109401 D 326423 CDS YP_001419769.1 154684608 5460285 110514..111212 1 NC_009725.1 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 111212 ispD 5460285 ispD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_001419769.1 110514 D 326423 CDS YP_001419770.1 154684609 5460286 111205..111681 1 NC_009725.1 catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 111681 ispF 5460286 ispF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_001419770.1 111205 D 326423 CDS YP_001419771.1 154684610 5460825 111773..113224 1 NC_009725.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 113224 gltX 5460825 gltX Bacillus amyloliquefaciens subsp. plantarum str. FZB42 glutamyl-tRNA synthetase YP_001419771.1 111773 D 326423 CDS YP_001419772.1 154684611 5460826 113535..114188 1 NC_009725.1 serine acetyltransferase CysE; hypothetical protein 114188 cysE 5460826 cysE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419772.1 113535 D 326423 CDS YP_001419773.1 154684612 5460827 114185..115585 1 NC_009725.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 115585 cysS 5460827 cysS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 cysteinyl-tRNA synthetase YP_001419773.1 114185 D 326423 CDS YP_001419774.1 154684613 5460828 115590..116021 1 NC_009725.1 conserved hypothetical protein YazC; hypothetical protein 116021 yazC 5460828 yazC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419774.1 115590 D 326423 CDS YP_001419775.1 154684614 5460829 116005..116754 1 NC_009725.1 conserved hypothetical protein YacO; hypothetical protein 116754 yacO 5460829 yacO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419775.1 116005 D 326423 CDS YP_001419776.1 154684615 5462243 116761..117273 1 NC_009725.1 conserved hypothetical protein YacP; hypothetical protein 117273 yacP 5462243 yacP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419776.1 116761 D 326423 CDS YP_001419777.1 154684616 5462244 117336..117992 1 NC_009725.1 sigma factor H; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; RNA polymerase factor sigma-70 117992 sigH 5462244 sigH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 RNA polymerase factor sigma-70 YP_001419777.1 117336 D 326423 CDS YP_001419778.1 154684617 5462245 118078..118227 1 NC_009725.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group have the CXXC motif; 50S ribosomal protein L33 118227 rpmG 5462245 rpmG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 50S ribosomal protein L33 YP_001419778.1 118078 D 326423 CDS YP_001419779.1 154684618 5462246 118260..118439 1 NC_009725.1 forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 118439 secE 5462246 secE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 preprotein translocase subunit SecE YP_001419779.1 118260 D 326423 CDS YP_001419780.1 154684619 5462247 118606..119139 1 NC_009725.1 Modulates Rho-dependent transcription termination; transcription antitermination protein NusG 119139 nusG 5462247 nusG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 transcription antitermination protein NusG YP_001419780.1 118606 D 326423 CDS YP_001419781.1 154684620 5462874 119307..119732 1 NC_009725.1 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 119732 rplK 5462874 rplK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 50S ribosomal protein L11 YP_001419781.1 119307 D 326423 CDS YP_001419782.1 154684621 5462875 119827..120525 1 NC_009725.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 120525 rplA 5462875 rplA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 50S ribosomal protein L1 YP_001419782.1 119827 D 326423 CDS YP_001419783.1 154684622 5462876 120780..121280 1 NC_009725.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 121280 rplJ 5462876 rplJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 50S ribosomal protein L10 YP_001419783.1 120780 D 326423 CDS YP_001419784.1 154684623 5462877 121322..121693 1 NC_009725.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 121693 rplL 5462877 rplL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 50S ribosomal protein L7/L12 YP_001419784.1 121322 D 326423 CDS YP_001419785.1 154684624 5462878 121785..122390 1 NC_009725.1 hypothetical protein YbxB; hypothetical protein 122390 ybxB 5462878 ybxB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419785.1 121785 D 326423 CDS YP_001419786.1 154684625 5459527 122626..126216 1 NC_009725.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 126216 rpoB 5459527 rpoB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DNA-directed RNA polymerase subunit beta YP_001419786.1 122626 D 326423 CDS YP_001419787.1 154684626 5459528 126279..129878 1 NC_009725.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 129878 rpoC 5459528 rpoC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DNA-directed RNA polymerase subunit beta' YP_001419787.1 126279 D 326423 CDS YP_001419788.1 154684627 5459529 130047..130295 1 NC_009725.1 in Bacillus subtilis this non-essential protein associates with the ribosome; ribosomal protein L7Ae-like 130295 ybxF 5459529 ybxF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ribosomal protein L7Ae-like YP_001419788.1 130047 D 326423 CDS YP_001419789.1 154684628 5459530 130411..130827 1 NC_009725.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 130827 rpsL 5459530 rpsL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 30S ribosomal protein S12 YP_001419789.1 130411 D 326423 CDS YP_001419790.1 154684629 5459531 130867..131337 1 NC_009725.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 131337 rpsG 5459531 rpsG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 30S ribosomal protein S7 YP_001419790.1 130867 D 326423 CDS YP_001419791.1 154684630 5461278 131390..133468 1 NC_009725.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 133468 fusA 5461278 fusA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 elongation factor G YP_001419791.1 131390 D 326423 CDS YP_001419792.1 154684631 5461279 133588..134778 1 NC_009725.1 elongation factor EF-Tu; EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 134778 tufA 5461279 tufA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 elongation factor Tu YP_001419792.1 133588 D 326423 CDS YP_001419793.1 154684632 5461280 134882..135847 1 NC_009725.1 hypothetical protein YbaC; YbaC 135847 ybaC 5461280 ybaC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 YbaC YP_001419793.1 134882 D 326423 CDS YP_001419794.1 154684633 5461281 136096..136404 1 NC_009725.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 136404 rpsJ 5461281 rpsJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 30S ribosomal protein S10 YP_001419794.1 136096 D 326423 CDS YP_001419795.1 154684634 5461282 136444..137073 1 NC_009725.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 137073 rplC 5461282 rplC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 50S ribosomal protein L3 YP_001419795.1 136444 D 326423 CDS YP_001419796.1 154684635 5460901 137101..137724 1 NC_009725.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 137724 rplD 5460901 rplD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 50S ribosomal protein L4 YP_001419796.1 137101 D 326423 CDS YP_001419797.1 154684636 5460902 137724..138011 1 NC_009725.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 138011 rplW 5460902 rplW Bacillus amyloliquefaciens subsp. plantarum str. FZB42 50S ribosomal protein L23 YP_001419797.1 137724 D 326423 CDS YP_001419798.1 154684637 5460903 138043..138876 1 NC_009725.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 138876 rplB 5460903 rplB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 50S ribosomal protein L2 YP_001419798.1 138043 D 326423 CDS YP_001419799.1 154684638 5460904 138934..139212 1 NC_009725.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 139212 rpsS 5460904 rpsS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 30S ribosomal protein S19 YP_001419799.1 138934 D 326423 CDS YP_001419800.1 154684639 5460905 139229..139570 1 NC_009725.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 139570 rplV 5460905 rplV Bacillus amyloliquefaciens subsp. plantarum str. FZB42 50S ribosomal protein L22 YP_001419800.1 139229 D 326423 CDS YP_001419801.1 154684640 5459895 139574..140230 1 NC_009725.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 140230 rpsC 5459895 rpsC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 30S ribosomal protein S3 YP_001419801.1 139574 D 326423 CDS YP_001419802.1 154684641 5459896 140232..140666 1 NC_009725.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 140666 rplP 5459896 rplP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 50S ribosomal protein L16 YP_001419802.1 140232 D 326423 CDS YP_001419803.1 154684642 5459897 140656..140856 1 NC_009725.1 one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 140856 rpmC 5459897 rpmC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 50S ribosomal protein L29 YP_001419803.1 140656 D 326423 CDS YP_001419804.1 154684643 5459898 140879..141142 1 NC_009725.1 primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 141142 rpsQ 5459898 rpsQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 30S ribosomal protein S17 YP_001419804.1 140879 D 326423 CDS YP_001419805.1 154684644 5459899 141183..141551 1 NC_009725.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 141551 rplN 5459899 rplN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 50S ribosomal protein L14 YP_001419805.1 141183 D 326423 CDS YP_001419806.1 154684645 5459688 141588..141899 1 NC_009725.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 141899 rplX 5459688 rplX Bacillus amyloliquefaciens subsp. plantarum str. FZB42 50S ribosomal protein L24 YP_001419806.1 141588 D 326423 CDS YP_001419807.1 154684646 5459689 141926..142465 1 NC_009725.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 142465 rplE 5459689 rplE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 50S ribosomal protein L5 YP_001419807.1 141926 D 326423 CDS YP_001419808.1 154684647 5459690 142488..142673 1 NC_009725.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif; 30S ribosomal protein S14 142673 rpsN 5459690 rpsN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 30S ribosomal protein S14 YP_001419808.1 142488 D 326423 CDS YP_001419809.1 154684648 5459691 142705..143103 1 NC_009725.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 143103 rpsH 5459691 rpsH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 30S ribosomal protein S8 YP_001419809.1 142705 D 326423 CDS YP_001419810.1 154684649 5459692 143134..143673 1 NC_009725.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 143673 rplF 5459692 rplF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 50S ribosomal protein L6 YP_001419810.1 143134 D 326423 CDS YP_001419811.1 154684650 5461752 143708..144070 1 NC_009725.1 binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 144070 rplR 5461752 rplR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 50S ribosomal protein L18 YP_001419811.1 143708 D 326423 CDS YP_001419812.1 154684651 5461753 144089..144595 1 NC_009725.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 144595 rpsE 5461753 rpsE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 30S ribosomal protein S5 YP_001419812.1 144089 D 326423 CDS YP_001419813.1 154684652 5461754 144609..144788 1 NC_009725.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 144788 rpmD 5461754 rpmD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 50S ribosomal protein L30 YP_001419813.1 144609 D 326423 CDS YP_001419814.1 154684653 5461755 144819..145259 1 NC_009725.1 late assembly protein; 50S ribosomal protein L15 145259 rplO 5461755 rplO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 50S ribosomal protein L15 YP_001419814.1 144819 D 326423 CDS YP_001419815.1 154684654 5461756 145261..146556 1 NC_009725.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 146556 secY 5461756 secY Bacillus amyloliquefaciens subsp. plantarum str. FZB42 preprotein translocase subunit SecY YP_001419815.1 145261 D 326423 CDS YP_001419816.1 154684655 5460952 146608..147261 1 NC_009725.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 147261 adk 5460952 adk Bacillus amyloliquefaciens subsp. plantarum str. FZB42 adenylate kinase YP_001419816.1 146608 D 326423 CDS YP_001419817.1 154684656 5460953 147258..148004 1 NC_009725.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase 148004 map 5460953 map Bacillus amyloliquefaciens subsp. plantarum str. FZB42 methionine aminopeptidase YP_001419817.1 147258 D 326423 CDS YP_001419818.1 154684657 5460954 148329..148547 1 NC_009725.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 148547 infA 5460954 infA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 translation initiation factor IF-1 YP_001419818.1 148329 D 326423 CDS YP_001419819.1 154684658 5460955 148581..148694 1 NC_009725.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 148694 rpmJ 5460955 rpmJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 50S ribosomal protein L36 YP_001419819.1 148581 D 326423 CDS YP_001419820.1 154684659 5460956 148717..149082 1 NC_009725.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 149082 rpsM 5460956 rpsM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 30S ribosomal protein S13 YP_001419820.1 148717 D 326423 CDS YP_001419821.1 154684660 5461293 149103..149498 1 NC_009725.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 149498 rpsK 5461293 rpsK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 30S ribosomal protein S11 YP_001419821.1 149103 D 326423 CDS YP_001419822.1 154684661 5461294 149675..150619 1 NC_009725.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 150619 rpoA 5461294 rpoA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DNA-directed RNA polymerase subunit alpha YP_001419822.1 149675 D 326423 CDS YP_001419823.1 154684662 5461295 150697..151059 1 NC_009725.1 is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 151059 rplQ 5461295 rplQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 50S ribosomal protein L17 YP_001419823.1 150697 D 326423 CDS YP_001419824.1 154684663 5461296 151191..152036 1 NC_009725.1 with CbiNQ forms the ABC transporter for cobalt import; Bacillus spp. have two adjacent copies of this gene; cobalt transporter ATP-binding subunit 152036 cbiO 5461296 cbiO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 cobalt transporter ATP-binding subunit YP_001419824.1 151191 D 326423 CDS YP_001419825.1 154684664 5461297 152051..152881 1 NC_009725.1 with CbiNQ forms the ABC transporter for cobalt import; Bacillus spp. have two adjacent copies of this gene; cobalt transporter ATP-binding subunit 152881 cbiO 5461297 cbiO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 cobalt transporter ATP-binding subunit YP_001419825.1 152051 D 326423 CDS YP_001419826.1 154684665 5459752 152878..153675 1 NC_009725.1 ABC transporter (pemease) YbaF; YbaF 153675 ybaF 5459752 ybaF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 YbaF YP_001419826.1 152878 D 326423 CDS YP_001419827.1 154684666 5459753 153688..154431 1 NC_009725.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 154431 truA 5459753 truA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 tRNA pseudouridine synthase A YP_001419827.1 153688 D 326423 CDS YP_001419828.1 154684667 5459754 154591..155028 1 NC_009725.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 155028 rplM 5459754 rplM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 50S ribosomal protein L13 YP_001419828.1 154591 D 326423 CDS YP_001419829.1 154684668 5459755 155049..155441 1 NC_009725.1 forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 155441 rpsI 5459755 rpsI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 30S ribosomal protein S9 YP_001419829.1 155049 D 326423 CDS YP_001419830.1 154684669 5459756 155579..156346 1 NC_009725.1 hypothetical protein YbaJ; YbaJ 156346 ybaJ 5459756 ybaJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 YbaJ YP_001419830.1 155579 D 326423 CDS YP_001419831.1 154684670 5460890 complement(156360..156833) 1 NC_009725.1 conserved hypothetical protein YizA; hypothetical protein 156833 yizA 5460890 yizA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419831.1 156360 R 326423 CDS YP_001419832.1 154684671 5460891 156964..157407 1 NC_009725.1 hypothetical protein YbaK; YbaK 157407 ybaK 5460891 ybaK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 YbaK YP_001419832.1 156964 D 326423 CDS YP_001419833.1 154684672 5460892 157468..158181 1 NC_009725.1 n-acetylmuramoyl-L-alanine amidase CwlD; hypothetical protein 158181 cwlD 5460892 cwlD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419833.1 157468 D 326423 CDS YP_001419834.1 154684673 5460893 158261..159313 1 NC_009725.1 ATP-binding mrp-like protein YbaL; hypothetical protein 159313 ybaL 5460893 ybaL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419834.1 158261 D 326423 CDS YP_001419835.1 154684674 5460894 complement(159346..159903) 1 NC_009725.1 germination response protein precursor GerD; GerD 159903 gerD 5460894 gerD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GerD YP_001419835.1 159346 R 326423 CDS YP_001419836.1 154684675 5460234 160011..160607 1 NC_009725.1 kinB sporulation signaling pathway activator KbaA; KbaA 160607 kbaA 5460234 kbaA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 KbaA YP_001419836.1 160011 D 326423 CDS YP_001419837.1 154684676 5460235 complement(160608..161372) 1 NC_009725.1 polysaccharide deacetylase YbaN; hypothetical protein 161372 ybaN 5460235 ybaN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419837.1 160608 R 326423 CDS YP_001419838.1 154684677 5462504 complement(176901..178115) 1 NC_009725.1 glucose/mannose:H+ symporter/fucose permease GlcP1; GlcP1 178115 glcP1 5462504 glcP1 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GlcP1 YP_001419838.1 176901 R 326423 CDS YP_001419839.1 154684678 5462505 178332..179609 1 NC_009725.1 4-aminobutyrate aminotransferase GabT1; GabT1 179609 gabT1 5462505 gabT1 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GabT1 YP_001419839.1 178332 D 326423 CDS YP_001419840.1 154684679 5462506 179606..180556 1 NC_009725.1 fructose-1,6 biphosphatase/inositol monophosphatase Yktc1; hypothetical protein 180556 yktc1 5462506 yktc1 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419840.1 179606 D 326423 CDS YP_001419841.1 154684680 5462507 180531..181577 1 NC_009725.1 zinc-binding dehydrogenase GutB1; GutB1 181577 gutB1 5462507 gutB1 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GutB1 YP_001419841.1 180531 D 326423 CDS YP_001419842.1 154684681 5461636 181938..183242 1 NC_009725.1 sulfate permease YbaR; hypothetical protein 183242 ybaR 5461636 ybaR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419842.1 181938 D 326423 CDS YP_001419843.1 154684682 5461637 183351..184334 1 NC_009725.1 sodium dependent transporter YbaS; hypothetical protein 184334 ybaS 5461637 ybaS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419843.1 183351 D 326423 CDS YP_001419844.1 154684683 5461638 complement(184323..184955) 1 NC_009725.1 hypothetical protein YbaA; YbaA 184955 ybaA 5461638 ybaA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 YbaA YP_001419844.1 184323 R 326423 CDS YP_001419845.1 154684684 5461639 complement(185072..186094) 1 NC_009725.1 iron-uptake system permease protein FeuC; FeuC 186094 feuC 5461639 feuC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 FeuC YP_001419845.1 185072 R 326423 CDS YP_001419846.1 154684685 5461640 complement(186084..187091) 1 NC_009725.1 iron-uptake system permease protein FeuB; FeuB 187091 feuB 5461640 feuB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 FeuB YP_001419846.1 186084 R 326423 CDS YP_001419847.1 154684686 5461581 complement(187111..188067) 1 NC_009725.1 iron-binding protein FeuA 188067 feuA 5461581 feuA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 iron-binding protein FeuA YP_001419847.1 187111 R 326423 CDS YP_001419848.1 154684687 5461582 complement(188155..189750) 1 NC_009725.1 transcription regulator (AraC/XylS family) YbbB; hypothetical protein 189750 ybbB 5461582 ybbB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419848.1 188155 R 326423 CDS YP_001419849.1 154684688 5461583 complement(189888..191132) 1 NC_009725.1 conserved hypothetical protein YbbC; hypothetical protein 191132 ybbC 5461583 ybbC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419849.1 189888 R 326423 CDS YP_001419850.1 154684689 5461584 complement(191148..193061) 1 NC_009725.1 beta-hexosaminidase YbbD; hypothetical protein 193061 ybbD 5461584 ybbD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419850.1 191148 R 326423 CDS YP_001419851.1 154684690 5461585 complement(193108..194391) 1 NC_009725.1 beta-lactamase YbbE; hypothetical protein 194391 ybbE 5461585 ybbE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419851.1 193108 R 326423 CDS YP_001419852.1 154684691 5462441 complement(194410..195777) 1 NC_009725.1 sucrose phosphotransferase enzyme II YbbF; hypothetical protein 195777 ybbF 5462441 ybbF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419852.1 194410 R 326423 CDS YP_001419853.1 154684692 5462442 complement(195906..196835) 1 NC_009725.1 catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway; N-acetylmuramic acid-6-phosphate etherase 196835 murQ 5462442 murQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 N-acetylmuramic acid-6-phosphate etherase YP_001419853.1 195906 R 326423 CDS YP_001419854.1 154684693 5462443 complement(196935..197411) 1 NC_009725.1 hypothetical protein YbbJ; hypothetical protein 197411 ybbJ 5462443 ybbJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419854.1 196935 R 326423 CDS YP_001419855.1 154684694 5462444 complement(197430..197882) 1 NC_009725.1 conserved hypothetical protein YbbK; hypothetical protein 197882 ybbK 5462444 ybbK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419855.1 197430 R 326423 CDS YP_001419856.1 154684695 5460203 198702..199265 1 NC_009725.1 RNA-polymerase ECF sigma factor W; Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription: this protein is involved in detoxification and protection against antimicrobial; RNA polymerase sigma factor SigW 199265 sigW 5460203 sigW Bacillus amyloliquefaciens subsp. plantarum str. FZB42 RNA polymerase sigma factor SigW YP_001419856.1 198702 D 326423 CDS YP_001419857.1 154684696 5460127 199279..199905 1 NC_009725.1 predicted transmembrane transcriptional regulator (anti-sigma W factor) YbbM; hypothetical protein 199905 ybbM 5460127 ybbM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419857.1 199279 D 326423 CDS YP_001419858.1 154684697 5460128 200071..200892 1 NC_009725.1 conserved hypothetical protein YbbP; hypothetical protein 200892 ybbP 5460128 ybbP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419858.1 200071 D 326423 CDS YP_001419859.1 154684698 5460129 200885..202324 1 NC_009725.1 conserved hypothetical protein YbbR; hypothetical protein 202324 ybbR 5460129 ybbR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419859.1 200885 D 326423 CDS YP_001419860.1 154684699 5460130 202342..203688 1 NC_009725.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 203688 glmM 5460130 glmM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 phosphoglucosamine mutase YP_001419860.1 202342 D 326423 CDS YP_001419861.1 154684700 5460131 203774..203974 1 NC_009725.1 hypothetical protein 203974 5460131 RBAM_002310 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419861.1 203774 D 326423 CDS YP_001419862.1 154684701 5460538 204120..205922 1 NC_009725.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 205922 glmS 5460538 glmS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 glucosamine--fructose-6-phosphate aminotransferase YP_001419862.1 204120 D 326423 CDS YP_001419863.1 154684702 5460539 206567..207439 1 NC_009725.1 ATP binding protein of ABC transporter 207439 5460539 RBAM_002330 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ATP binding protein of ABC transporter YP_001419863.1 206567 D 326423 CDS YP_001419864.1 154684703 5460540 207417..208070 1 NC_009725.1 hypothetical protein 208070 5460540 RBAM_002340 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419864.1 207417 D 326423 CDS YP_001419865.1 154684704 5460541 complement(208173..208373) 1 NC_009725.1 hypothetical protein 208373 5460541 RBAM_002350 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419865.1 208173 R 326423 CDS YP_001419866.1 154684705 5460542 208417..208575 1 NC_009725.1 hypothetical protein 208575 5460542 RBAM_002360 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419866.1 208417 D 326423 CDS YP_001419867.1 154684706 5461774 208858..208989 1 NC_009725.1 hypothetical protein 208989 5461774 RBAM_002370 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419867.1 208858 D 326423 CDS YP_001419868.1 154684707 5461775 209089..209772 1 NC_009725.1 member of the two componenent signal transduction system containing the sensor IM histidine kinase RBAM02390; two-component response regulator 209772 5461775 RBAM_002380 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 two-component response regulator YP_001419868.1 209089 D 326423 CDS YP_001419869.1 154684708 5461776 209769..210791 1 NC_009725.1 membrane bound sensor kinase; probably linked with the response regulator RBAM002380; two-component sensor histidine kinase 210791 5461776 RBAM_002390 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 two-component sensor histidine kinase YP_001419869.1 209769 D 326423 CDS YP_001419870.1 154684709 5461777 211982..212746 1 NC_009725.1 peptide ABC transporter ATPase 212746 5461777 RBAM_002400 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 peptide ABC transporter ATPase YP_001419870.1 211982 D 326423 CDS YP_001419871.1 154684710 5461778 212733..214661 1 NC_009725.1 ABC-type transport system,permease 214661 5461778 RBAM_002410 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ABC-type transport system,permease YP_001419871.1 212733 D 326423 CDS YP_001419872.1 154684711 5461273 215120..215332 1 NC_009725.1 hypothetical protein YbdO1; hypothetical protein 215332 ybdO1 5461273 ybdO1 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419872.1 215120 D 326423 CDS YP_001419873.1 154684712 5461274 complement(215385..216230) 1 NC_009725.1 2,5-diketo-D-gluconic acid reductase KdgR1; KdgR1 216230 kdgR1 5461274 kdgR1 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 KdgR1 YP_001419873.1 215385 R 326423 CDS YP_001419874.1 154684713 5461275 complement(216341..217033) 1 NC_009725.1 conserved hypothetical protein YxaC; hypothetical protein 217033 yxaC 5461275 yxaC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419874.1 216341 R 326423 CDS YP_001419875.1 154684714 5461276 217604..218035 1 NC_009725.1 transcriptional regulator YxaD; hypothetical protein 218035 yxaD 5461276 yxaD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419875.1 217604 D 326423 CDS YP_001419876.1 154684715 5461277 218460..219845 1 NC_009725.1 proline-specific permease#YbxG; hypothetical protein 219845 ybxG 5461277 ybxG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419876.1 218460 D 326423 CDS YP_001419877.1 154684716 5462430 219938..220408 1 NC_009725.1 hypothetical protein YfnB; hypothetical protein 220408 yfnB 5462430 yfnB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419877.1 219938 D 326423 CDS YP_001419878.1 154684717 5462431 220661..221791 1 NC_009725.1 together with response regulator RBAM002490 part of a two component signal transduction system; sensory transduction protein kinase 221791 5462431 RBAM_002480 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 sensory transduction protein kinase YP_001419878.1 220661 D 326423 CDS YP_001419879.1 154684718 5462432 221796..222440 1 NC_009725.1 together with the sensor histidine kinase RBAM02480 part of a two component signal transduction system; two-component response regulator 222440 5462432 RBAM_002490 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 two-component response regulator YP_001419879.1 221796 D 326423 CDS YP_001419880.1 154684719 5462433 222581..223516 1 NC_009725.1 ABC transporter (ATP-binding protein) YfiL; hypothetical protein 223516 yfiL 5462433 yfiL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419880.1 222581 D 326423 CDS YP_001419881.1 154684720 5462434 223525..224712 1 NC_009725.1 ABC transporter, permease component YfiM; hypothetical protein 224712 yfiM 5462434 yfiM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419881.1 223525 D 326423 CDS YP_001419882.1 154684721 5461769 224709..225851 1 NC_009725.1 ABC-type multidrug transport system, permease component YfiN1; hypothetical protein 225851 yfiN1 5461769 yfiN1 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419882.1 224709 D 326423 CDS YP_001419883.1 154684722 5461770 225865..226044 1 NC_009725.1 hypothetical protein 226044 5461770 RBAM_002530 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419883.1 225865 D 326423 CDS YP_001419884.1 154684723 5461771 226148..226624 1 NC_009725.1 hypothetical protein YolA1; hypothetical protein 226624 yolA1 5461771 yolA1 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419884.1 226148 D 326423 CDS YP_001419885.1 154684724 5461772 226702..226953 1 NC_009725.1 sporulation-specific SASP protein CsgA; hypothetical protein 226953 csgA 5461772 csgA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419885.1 226702 D 326423 CDS YP_001419886.1 154684725 5461773 227063..227761 1 NC_009725.1 hypothetical protein YqeB; hypothetical protein 227761 yqeB 5461773 yqeB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419886.1 227063 D 326423 CDS YP_001419887.1 154684726 5462083 complement(227807..228067) 1 NC_009725.1 hypothetical protein YbyB; hypothetical protein 228067 ybyB 5462083 ybyB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419887.1 227807 R 326423 CDS YP_001419888.1 154684727 5462084 228235..229872 1 NC_009725.1 hypothetical protein YbeC; hypothetical protein 229872 ybeC 5462084 ybeC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419888.1 228235 D 326423 CDS YP_001419889.1 154684728 5462085 230404..231606 1 NC_009725.1 hypothetical protein 231606 5462085 RBAM_002590 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419889.1 230404 D 326423 CDS YP_001419890.1 154684729 5462086 complement(232111..232998) 1 NC_009725.1 glycerophosphoryl diester phosphodiesterase GlpQ; GlpQ 232998 glpQ 5462086 glpQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GlpQ YP_001419890.1 232111 R 326423 CDS YP_001419891.1 154684730 5462087 complement(233094..234428) 1 NC_009725.1 glycerol-3-phosphate permease GlpT; GlpT 234428 glpT 5462087 glpT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GlpT YP_001419891.1 233094 R 326423 CDS YP_001419892.1 154684731 5462792 234763..235005 1 NC_009725.1 hypothetical protein YbeF; hypothetical protein 235005 ybeF 5462792 ybeF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419892.1 234763 D 326423 CDS YP_001419893.1 154684732 5462793 complement(235061..236182) 1 NC_009725.1 4-hydroxyphenylacetate-3-hydroxylase YoaI; hypothetical protein 236182 yoaI 5462793 yoaI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419893.1 235061 R 326423 CDS YP_001419894.1 154684733 5462794 complement(236656..236982) 1 NC_009725.1 hypothetical protein YbfE; hypothetical protein 236982 ybfE 5462794 ybfE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419894.1 236656 R 326423 CDS YP_001419895.1 154684734 5462795 complement(237154..239328) 1 NC_009725.1 conserved hypothetical protein YbfG; hypothetical protein 239328 ybfG 5462795 ybfG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419895.1 237154 R 326423 CDS YP_001419896.1 154684735 5462796 239702..240145 1 NC_009725.1 hypothetical protein 240145 5462796 RBAM_002660 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419896.1 239702 D 326423 CDS YP_001419897.1 154684736 5462781 240410..240880 1 NC_009725.1 hypothetical protein 240880 5462781 RBAM_002670 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419897.1 240410 D 326423 CDS YP_001419898.1 154684737 5462782 240952..242022 1 NC_009725.1 Iron-containing alcohol dehydrogenase 242022 5462782 RBAM_002680 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 Iron-containing alcohol dehydrogenase YP_001419898.1 240952 D 326423 CDS YP_001419899.1 154684738 5462783 242104..243258 1 NC_009725.1 non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis; phosphoribosylglycinamide formyltransferase 2 243258 purT 5462783 purT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 phosphoribosylglycinamide formyltransferase 2 YP_001419899.1 242104 D 326423 CDS YP_001419900.1 154684739 5462784 243736..244269 1 NC_009725.1 phosphatidylserine synthase PssA; hypothetical protein 244269 pssA 5462784 pssA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419900.1 243736 D 326423 CDS YP_001419901.1 154684740 5462785 244260..244748 1 NC_009725.1 alkaline phosphatase YbfM; hypothetical protein 244748 ybfM 5462785 ybfM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419901.1 244260 D 326423 CDS YP_001419902.1 154684741 5461819 244741..245556 1 NC_009725.1 catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine; phosphatidylserine decarboxylase 245556 psd 5461819 psd Bacillus amyloliquefaciens subsp. plantarum str. FZB42 phosphatidylserine decarboxylase YP_001419902.1 244741 D 326423 CDS YP_001419903.1 154684742 5461820 245590..245874 1 NC_009725.1 hypothetical protein YbfN; hypothetical protein 245874 ybfN 5461820 ybfN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419903.1 245590 D 326423 CDS YP_001419904.1 154684743 5461821 245979..246947 1 NC_009725.1 conserved hypothetical protein YbfQ; hypothetical protein 246947 ybfQ 5461821 ybfQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419904.1 245979 D 326423 CDS YP_001419905.1 154684744 5461822 complement(246983..248233) 1 NC_009725.1 proton/glutamate symport protein GltP; hypothetical protein 248233 gltP 5461822 gltP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419905.1 246983 R 326423 CDS YP_001419906.1 154684745 5461823 248600..249670 1 NC_009725.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 249670 ybgE 5461823 ybgE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 branched-chain amino acid aminotransferase YP_001419906.1 248600 D 326423 CDS YP_001419907.1 154684746 5461797 complement(249711..251114) 1 NC_009725.1 histidine permease YbgF; hypothetical protein 251114 ybgF 5461797 ybgF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419907.1 249711 R 326423 CDS YP_001419908.1 154684747 5461798 complement(251228..252175) 1 NC_009725.1 converts homocysteine and S-adenosyl-methionine to methionine and S-adenosyl-homocysteine or S-methyl-methionine and homocysteine to two methionines; homocysteine methyltransferase 252175 mmuM 5461798 mmuM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 homocysteine methyltransferase YP_001419908.1 251228 R 326423 CDS YP_001419909.1 154684748 5461799 complement(252291..253727) 1 NC_009725.1 sodium/proton-dependent alanine transporter YbgH; hypothetical protein 253727 ybgH 5461799 ybgH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419909.1 252291 R 326423 CDS YP_001419910.1 154684749 5461800 complement(253752..254735) 1 NC_009725.1 catalyzes the formation of glutamate from glutamine; glutaminase 254735 ybgJ 5461800 ybgJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 glutaminase YP_001419910.1 253752 R 326423 CDS YP_001419911.1 154684750 5461801 255030..256271 1 NC_009725.1 sensor histidine kinase; transcriptional control of biofilm formation; hypothetical protein 256271 ycbA 5461801 ycbA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419911.1 255030 D 326423 CDS YP_001419912.1 154684751 5461576 256273..257220 1 NC_009725.1 two-component response regulator involved in biofilm formation; hypothetical protein 257220 ycbB 5461576 ycbB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419912.1 256273 D 326423 CDS YP_001419913.1 154684752 5461577 257255..257461 1 NC_009725.1 hypothetical protein 257461 5461577 RBAM_002830 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419913.1 257255 D 326423 CDS YP_001419914.1 154684753 5461578 257807..258013 1 NC_009725.1 tryptophan RNA-binding attenuator protein inhibitory protein RtpA (YczA); RtpA 258013 rtpA 5461578 rtpA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 RtpA YP_001419914.1 257807 D 326423 CDS YP_001419915.1 154684754 5461579 258129..258359 1 NC_009725.1 hypothetical protein 258359 5461579 RBAM_002850 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419915.1 258129 D 326423 CDS YP_001419916.1 154684755 5461580 complement(258469..259362) 1 NC_009725.1 cation efflux transporter YdfM; hypothetical protein 259362 ydfM 5461580 ydfM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419916.1 258469 R 326423 CDS YP_001419917.1 154684756 5461824 259790..260410 1 NC_009725.1 NAD(P)H nitroreductase YdfN; hypothetical protein 260410 ydfN 5461824 ydfN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419917.1 259790 D 326423 CDS YP_001419918.1 154684757 5461825 260435..261373 1 NC_009725.1 glyoxylase family protein YdfO; hypothetical protein 261373 ydfO 5461825 ydfO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419918.1 260435 D 326423 CDS YP_001419919.1 154684758 5461826 261504..261893 1 NC_009725.1 conserved hypothetical protein YdfP; hypothetical protein 261893 ydfP 5461826 ydfP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419919.1 261504 D 326423 CDS YP_001419920.1 154684759 5461827 262073..262411 1 NC_009725.1 thioredoxin like protein YdfQ; hypothetical protein 262411 ydfQ 5461827 ydfQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419920.1 262073 D 326423 CDS YP_001419921.1 154684760 5461828 complement(262475..262858) 1 NC_009725.1 hypothetical protein YcbP; hypothetical protein 262858 ycbP 5461828 ycbP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419921.1 262475 R 326423 CDS YP_001419922.1 154684761 5461283 263012..263440 1 NC_009725.1 cell wall hydrolase CwlJ; hypothetical protein 263440 cwlJ 5461283 cwlJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419922.1 263012 D 326423 CDS YP_001419923.1 154684762 5461284 263704..265455 1 NC_009725.1 phosphodiesterase/alkaline phosphatase PhoD; PhoD 265455 phoD 5461284 phoD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 PhoD YP_001419923.1 263704 D 326423 CDS YP_001419924.1 154684763 5461285 265468..265665 1 NC_009725.1 sec-independent protein translocase protein TatAD; TatAD 265665 tatAD 5461285 tatAD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 TatAD YP_001419924.1 265468 D 326423 CDS YP_001419925.1 154684764 5461286 265727..266452 1 NC_009725.1 sec-independent protein translocase protein TatCD; TatCD 266452 tatCD 5461286 tatCD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 TatCD YP_001419925.1 265727 D 326423 CDS YP_001419926.1 154684765 5461287 complement(266449..267096) 1 NC_009725.1 catalyzes the removal of 5-oxoproline from various penultimate amino acid residues except L-proline; pyrrolidone-carboxylate peptidase 267096 pcp 5461287 pcp Bacillus amyloliquefaciens subsp. plantarum str. FZB42 pyrrolidone-carboxylate peptidase YP_001419926.1 266449 R 326423 CDS YP_001419927.1 154684766 5462183 267168..268295 1 NC_009725.1 selenocysteine lyase YcbU; hypothetical protein 268295 ycbU 5462183 ycbU Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419927.1 267168 D 326423 CDS YP_001419928.1 154684767 5462184 complement(268331..269764) 1 NC_009725.1 drug-export protein LmrB; LmrB 269764 lmrB 5462184 lmrB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 LmrB YP_001419928.1 268331 R 326423 CDS YP_001419929.1 154684768 5462185 complement(269807..270373) 1 NC_009725.1 transcription repressor of lincomycin operon LmrA; LmrA 270373 lmrA 5462185 lmrA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 LmrA YP_001419929.1 269807 R 326423 CDS YP_001419930.1 154684769 5462186 270551..271666 1 NC_009725.1 asparaginase YccC; hypothetical protein 271666 yccC 5462186 yccC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419930.1 270551 D 326423 CDS YP_001419931.1 154684770 5462187 271863..272507 1 NC_009725.1 triacylglycerol lipase Lip; Lip 272507 lip 5462187 lip Bacillus amyloliquefaciens subsp. plantarum str. FZB42 Lip YP_001419931.1 271863 D 326423 CDS YP_001419932.1 154684771 5463218 272644..273714 1 NC_009725.1 conserved hypothetical protein YccF; hypothetical protein 273714 yccF 5463218 yccF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419932.1 272644 D 326423 CDS YP_001419933.1 154684772 5463219 273845..274777 1 NC_009725.1 conserved hypothetical YccK; hypothetical protein 274777 yccK 5463219 yccK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419933.1 273845 D 326423 CDS YP_001419934.1 154684773 5463220 complement(274821..275816) 1 NC_009725.1 hypothetical protein YcdA; hypothetical protein 275816 ycdA 5463220 ycdA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419934.1 274821 R 326423 CDS YP_001419935.1 154684774 5463221 275940..277343 1 NC_009725.1 hypothetical protein YcdB; hypothetical protein 277343 ycdB 5463221 ycdB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419935.1 275940 D 326423 CDS YP_001419936.1 154684775 5463222 277535..278902 1 NC_009725.1 hypothetical protein YcdC; hypothetical protein 278902 ycdC 5463222 ycdC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419936.1 277535 D 326423 CDS YP_001419937.1 154684776 5463305 complement(278899..279402) 1 NC_009725.1 hypothetical protein YcdD; hypothetical protein 279402 ycdD 5463305 ycdD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419937.1 278899 R 326423 CDS YP_001419938.1 154684777 5463306 279512..280633 1 NC_009725.1 response regulator aspartate phosphatase; cd00189, TPR, tetratricopeptide repeat domain; RapJ 280633 rapJ 5463306 rapJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 RapJ YP_001419938.1 279512 D 326423 CDS YP_001419939.1 154684778 5463307 280749..281528 1 NC_009725.1 glucose 1-dehydrogenase YcdF; hypothetical protein 281528 ycdF 5463307 ycdF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419939.1 280749 D 326423 CDS YP_001419940.1 154684779 5463308 281612..283291 1 NC_009725.1 oligo-1,6-glucosidase YcdG; hypothetical protein 283291 ycdG 5463308 ycdG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419940.1 281612 D 326423 CDS YP_001419941.1 154684780 5463309 283477..284436 1 NC_009725.1 ABC-transporter; cd01017; high-affinity zinc ABC transporter (Zn (II) -binding lipoprotein; proposed to be involved in surface adhesion; hypothetical protein 284436 ycdH 5463309 ycdH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419941.1 283477 D 326423 CDS YP_001419942.1 154684781 5462137 284491..285186 1 NC_009725.1 ABC transporter (ATP-binding protein) YcdI; hypothetical protein 285186 ycdI 5462137 ycdI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419942.1 284491 D 326423 CDS YP_001419943.1 154684782 5462138 285144..285983 1 NC_009725.1 zinc ABC transporter, permease protein YceA; hypothetical protein 285983 yceA 5462138 yceA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419943.1 285144 D 326423 CDS YP_001419944.1 154684783 5462139 complement(286028..287023) 1 NC_009725.1 conserved hypothetical protein YceB; hypothetical protein 287023 yceB 5462139 yceB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419944.1 286028 R 326423 CDS YP_001419945.1 154684784 5462140 287299..287895 1 NC_009725.1 tellurium resistance protein YceC; hypothetical protein 287895 yceC 5462140 yceC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419945.1 287299 D 326423 CDS YP_001419946.1 154684785 5462141 287919..288500 1 NC_009725.1 tellurium resistance protein YceD; hypothetical protein 288500 yceD 5462141 yceD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419946.1 287919 D 326423 CDS YP_001419947.1 154684786 5460585 288533..289111 1 NC_009725.1 tellurium resistance protein YceE; hypothetical protein 289111 yceE 5460585 yceE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419947.1 288533 D 326423 CDS YP_001419948.1 154684787 5460586 289150..289923 1 NC_009725.1 tellurium resistance protein YceF; hypothetical protein 289923 yceF 5460586 yceF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419948.1 289150 D 326423 CDS YP_001419949.1 154684788 5460587 289996..291618 1 NC_009725.1 hypothetical protein YceG; hypothetical protein 291618 yceG 5460587 yceG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419949.1 289996 D 326423 CDS YP_001419950.1 154684789 5460588 291625..292713 1 NC_009725.1 toxic anion resistance protein YceH; hypothetical protein 292713 yceH 5460588 yceH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419950.1 291625 D 326423 CDS YP_001419951.1 154684790 5460589 292829..294031 1 NC_009725.1 hypothetical transport protein YceI; hypothetical protein 294031 yceI 5460589 yceI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419951.1 292829 D 326423 CDS YP_001419952.1 154684791 5462295 294414..295670 1 NC_009725.1 glycine betaine ABC transporter (ATP-binding protein) OpuAA; OpuAA 295670 opuAA 5462295 opuAA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 OpuAA YP_001419952.1 294414 D 326423 CDS YP_001419953.1 154684792 5462296 295671..296519 1 NC_009725.1 glycine betaine ABC transporter (permease) OpuAB; OpuAB 296519 opuAB 5462296 opuAB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 OpuAB YP_001419953.1 295671 D 326423 CDS YP_001419954.1 154684793 5462297 296519..297400 1 NC_009725.1 glycine betaine ABC transporter (glycine betaine-binding protein) OpuAC; OpuAC 297400 opuAC 5462297 opuAC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 OpuAC YP_001419954.1 296519 D 326423 CDS YP_001419955.1 154684794 5462298 complement(297435..298556) 1 NC_009725.1 amidohydrolase AmhX; AmhX 298556 amhX 5462298 amhX Bacillus amyloliquefaciens subsp. plantarum str. FZB42 AmhX YP_001419955.1 297435 R 326423 CDS YP_001419956.1 154684795 5462299 298828..300123 1 NC_009725.1 conserved hypothetical protein YcgA; hypothetical protein 300123 ycgA 5462299 ycgA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419956.1 298828 D 326423 CDS YP_001419957.1 154684796 5462159 300215..300703 1 NC_009725.1 hypothetical protein YcgB; hypothetical protein 300703 ycgB 5462159 ycgB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419957.1 300215 D 326423 CDS YP_001419958.1 154684797 5462160 300933..302912 1 NC_009725.1 alpha-amylase AmyE; AmyE 302912 amyE 5462160 amyE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 AmyE YP_001419958.1 300933 D 326423 CDS YP_001419959.1 154684798 5462161 303182..304135 1 NC_009725.1 Converts (S)-lactate and NAD(+) to pyruvate and NADH; L-lactate dehydrogenase 304135 ldh 5462161 ldh Bacillus amyloliquefaciens subsp. plantarum str. FZB42 L-lactate dehydrogenase YP_001419959.1 303182 D 326423 CDS YP_001419960.1 154684799 5462162 complement(304177..305709) 1 NC_009725.1 multidrug-efflux transporter Mdr; major facilitator superfamily transporter 305709 mdr 5462162 mdr Bacillus amyloliquefaciens subsp. plantarum str. FZB42 major facilitator superfamily transporter YP_001419960.1 304177 R 326423 CDS YP_001419961.1 154684800 5462163 305823..306284 1 NC_009725.1 conserved hypothetical protein YcgE; hypothetical protein 306284 ycgE 5462163 ycgE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419961.1 305823 D 326423 CDS YP_001419962.1 154684801 5462474 306348..306977 1 NC_009725.1 conserved hypothetical protein YcgF; hypothetical protein 306977 ycgF 5462474 ycgF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419962.1 306348 D 326423 CDS YP_001419963.1 154684802 5462475 307042..307803 1 NC_009725.1 conserved hypothetical protein YqcI; hypothetical protein 307803 yqcI 5462475 yqcI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419963.1 307042 D 326423 CDS YP_001419964.1 154684803 5462476 complement(307805..309133) 1 NC_009725.1 amino acid transporter YcgH; hypothetical protein 309133 ycgH 5462476 ycgH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419964.1 307805 R 326423 CDS YP_001419965.1 154684804 5462477 309258..309854 1 NC_009725.1 conserved hypothetical protein YcgI; hypothetical protein 309854 ycgI 5462477 ycgI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419965.1 309258 D 326423 CDS YP_001419966.1 154684805 5462478 309989..310807 1 NC_009725.1 catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 310807 nadE 5462478 nadE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 NAD synthetase YP_001419966.1 309989 D 326423 CDS YP_001419967.1 154684806 5463067 complement(310858..311142) 1 NC_009725.1 antimicrobial peptide Lci; hypothetical protein 311142 lci 5463067 lci Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419967.1 310858 R 326423 CDS YP_001419968.1 154684807 5463068 complement(311322..311918) 1 NC_009725.1 ATP-binding membrane protein TmrB; TmrB 311918 tmrB 5463068 tmrB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 TmrB YP_001419968.1 311322 R 326423 CDS YP_001419969.1 154684808 5463069 complement(311970..312758) 1 NC_009725.1 hypothetical protein 312758 5463069 RBAM_003390 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419969.1 311970 R 326423 CDS YP_001419970.1 154684809 5463070 312977..314287 1 NC_009725.1 sugar transport-related protein YcbE; hypothetical protein 314287 ycbE 5463070 ycbE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419970.1 312977 D 326423 CDS YP_001419971.1 154684810 5463071 314413..314973 1 NC_009725.1 catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase 314973 aroK 5463071 aroK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 shikimate kinase YP_001419971.1 314413 D 326423 CDS YP_001419972.1 154684811 5461434 315114..316070 1 NC_009725.1 cephalosporin C deacetylase Cah; Cah 316070 cah 5461434 cah Bacillus amyloliquefaciens subsp. plantarum str. FZB42 Cah YP_001419972.1 315114 D 326423 CDS YP_001419973.1 154684812 5461435 316136..316921 1 NC_009725.1 conserved hypothetical protein YcgL; hypothetical protein 316921 ycgL 5461435 ycgL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419973.1 316136 D 326423 CDS YP_001419974.1 154684813 5461436 317043..318020 1 NC_009725.1 proline dehydrohenase YcgM; hypothetical protein 318020 ycgM 5461436 ycgM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419974.1 317043 D 326423 CDS YP_001419975.1 154684814 5461437 318038..319585 1 NC_009725.1 catalyzes the conversion of 1-proline-5-carboxylate dehydrogenase to L-glutamate; 1-pyrroline-5-carboxylate dehydrogenase 319585 ycgN 5461437 ycgN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 1-pyrroline-5-carboxylate dehydrogenase YP_001419975.1 318038 D 326423 CDS YP_001419976.1 154684815 5461438 319824..321131 1 NC_009725.1 sodium/proline symporter YcgO; hypothetical protein 321131 ycgO 5461438 ycgO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419976.1 319824 D 326423 CDS YP_001419977.1 154684816 5461715 321289..322524 1 NC_009725.1 conserved hypothetical protein YcgP; hypothetical protein 322524 ycgP 5461715 ycgP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419977.1 321289 D 326423 CDS YP_001419978.1 154684817 5461716 322722..323732 1 NC_009725.1 thioredoxin reductase like protein YcgT; hypothetical protein 323732 ycgT 5461716 ycgT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419978.1 322722 D 326423 CDS YP_001419979.1 154684818 5461717 complement(323788..325227) 1 NC_009725.1 uroporphyrin-III C-methyltransferase NasF; NasF 325227 nasF 5461717 nasF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 NasF YP_001419979.1 323788 R 326423 CDS YP_001419980.1 154684819 5461718 complement(325294..325614) 1 NC_009725.1 assimilatory nitrite reductase (subunit) NasE; NasE 325614 nasE 5461718 nasE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 NasE YP_001419980.1 325294 R 326423 CDS YP_001419981.1 154684820 5461719 complement(325635..328052) 1 NC_009725.1 assimilatory nitrite reductase (subunit) NasD; hypothetical protein 328052 nasD 5461719 nasD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419981.1 325635 R 326423 CDS YP_001419982.1 154684821 5462963 complement(328172..330304) 1 NC_009725.1 assimilatory nitrate reductase (catalytic subunit) NasC; NasC 330304 nasC 5462963 nasC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 NasC YP_001419982.1 328172 R 326423 CDS YP_001419983.1 154684822 5462964 complement(330297..332624) 1 NC_009725.1 assimilatory nitrate reductase (electron transfer subunit) NasB; NasB 332624 nasB 5462964 nasB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 NasB YP_001419983.1 330297 R 326423 CDS YP_001419984.1 154684823 5462965 332805..334010 1 NC_009725.1 nitrate transporter NasA; NasA 334010 nasA 5462965 nasA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 NasA YP_001419984.1 332805 D 326423 CDS YP_001419985.1 154684824 5462966 334199..335401 1 NC_009725.1 conserved hypothetical protein YciC; hypothetical protein 335401 yciC 5462966 yciC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419985.1 334199 D 326423 CDS YP_001419986.1 154684825 5462967 335466..336602 1 NC_009725.1 glutathione-dependent formaldehyde dehydrogenase 336602 5462967 RBAM_003560 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 glutathione-dependent formaldehyde dehydrogenase YP_001419986.1 335466 D 326423 CDS YP_001419987.1 154684826 5462637 336617..337051 1 NC_009725.1 conserved hypothetical protein YckC; hypothetical protein 337051 yckC 5462637 yckC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419987.1 336617 D 326423 CDS YP_001419988.1 154684827 5462638 337124..337447 1 NC_009725.1 hypothetical protein YckD; hypothetical protein 337447 yckD 5462638 yckD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419988.1 337124 D 326423 CDS YP_001419989.1 154684828 5462639 337551..338987 1 NC_009725.1 conserved hypothetical protein YckE; hypothetical protein 338987 yckE 5462639 yckE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419989.1 337551 D 326423 CDS YP_001419990.1 154684829 5462640 complement(339028..339426) 1 NC_009725.1 inhibitor of the DNA degrading activity of NucA (competence) Nin; hypothetical protein 339426 nin 5462640 nin Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001419990.1 339028 R 326423 CDS YP_001419991.1 154684830 5462641 complement(339447..339884) 1 NC_009725.1 membrane-associated nuclease NucA; NucA 339884 nucA 5462641 nucA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 NucA YP_001419991.1 339447 R 326423 CDS YP_001419992.1 154684831 5462763 complement(340243..340800) 1 NC_009725.1 6-phospho-3-hexuloisomerase (PHI) HxlB; HxlB 340800 hxlB 5462763 hxlB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 HxlB YP_001419992.1 340243 R 326423 CDS YP_001419993.1 154684832 5462764 complement(340797..341432) 1 NC_009725.1 3-hexulose-6-phosphate synthase (HPS) HxlA; HxlA 341432 hxlA 5462764 hxlA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 HxlA YP_001419993.1 340797 R 326423 CDS YP_001419994.1 154684833 5462765 341664..342026 1 NC_009725.1 transcriptional regulator of hxlAB expression HxlR; HxlR 342026 hxlR 5462765 hxlR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 HxlR YP_001419994.1 341664 D 326423 CDS YP_001419995.1 154684834 5462766 342618..353372 1 NC_009725.1 surfactin biosynthesis; surfactin synthetase A; SrfAA 353372 srfAA 5462766 srfAA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SrfAA YP_001419995.1 342618 D 326423 CDS YP_001419996.1 154684835 5462767 353394..364154 1 NC_009725.1 surfactin synthesis; surfactin synthetase B; SrfAB 364154 srfAB 5462767 srfAB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SrfAB YP_001419996.1 353394 D 326423 CDS YP_001419997.1 154684836 5460070 356503..356667 1 NC_009725.1 genetic competence; competence protein S; ComS 356667 comS 5460070 comS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ComS YP_001419997.1 356503 D 326423 CDS YP_001419998.1 154684837 5460071 364189..368025 1 NC_009725.1 surfactin synthesis; surfactin synthetase C; SrfAC 368025 srfAC 5460071 srfAC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SrfAC YP_001419998.1 364189 D 326423 CDS YP_001419999.1 154684838 5460072 368045..368776 1 NC_009725.1 surfactin synthesis; surfactin synthetase D; SrfAD 368776 srfAD 5460072 srfAD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SrfAD YP_001419999.1 368045 D 326423 CDS YP_001420000.1 154684839 5460073 368898..370208 1 NC_009725.1 COG0436; aspartate/tyrosine/aromatic acids and related molecules; hypothetical protein 370208 5460073 RBAM_003700 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420000.1 368898 D 326423 CDS YP_001420001.1 154684840 5460074 complement(370243..370638) 1 NC_009725.1 hypothetical protein 370638 5460074 RBAM_003710 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420001.1 370243 R 326423 CDS YP_001420002.1 154684841 5462886 complement(370778..371740) 1 NC_009725.1 pfam00892, integral membrane protein DUF6; hypothetical protein 371740 ycxC 5462886 ycxC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420002.1 370778 R 326423 CDS YP_001420003.1 154684842 5462887 371859..373169 1 NC_009725.1 COG1167, AR08; transcriptional regulator containing a DNA binding HTH domain and an aminotransferase domain [MocR family]; hypothetical protein 373169 ycxD 5462887 ycxD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420003.1 371859 D 326423 CDS YP_001420004.1 154684843 5462888 complement(373164..373838) 1 NC_009725.1 phosphopantetheinylation of a serine residue in apo-ACP or PCP to convert them into active holo-form; phosphopantetheinyl transferase; Sfp 373838 sfp 5462888 sfp Bacillus amyloliquefaciens subsp. plantarum str. FZB42 Sfp YP_001420004.1 373164 R 326423 CDS YP_001420005.1 154684844 5462889 complement(373937..374584) 1 NC_009725.1 COG2364, predicted integral membrane protein; hypothetical protein 374584 yczE 5462889 yczE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420005.1 373937 R 326423 CDS YP_001420006.1 154684845 5462890 complement(374666..375409) 1 NC_009725.1 ABC-type transport protein, ATPase component; possibly involved in octopin transport; hypothetical protein 375409 yckI 5462890 yckI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420006.1 374666 R 326423 CDS YP_001420007.1 154684846 5462820 complement(375422..376111) 1 NC_009725.1 ABC-type transport protein, permease component; possibly involved in octopin transport; hypothetical protein 376111 yckJ 5462820 yckJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420007.1 375422 R 326423 CDS YP_001420008.1 154684847 5462821 complement(376113..376910) 1 NC_009725.1 probable amino-acid ABC transporter extracellular binding protein; possibly involved in opine synthesis; hypothetical protein 376910 yckK 5462821 yckK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420008.1 376113 R 326423 CDS YP_001420009.1 154684848 5462822 complement(377039..377911) 1 NC_009725.1 transcription regulator LysR family YclA; hypothetical protein 377911 yclA 5462822 yclA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420009.1 377039 R 326423 CDS YP_001420010.1 154684849 5462823 377997..378617 1 NC_009725.1 phenylacrylic acid decarboxylase YclB; aromatic acid decarboxylase 378617 yclB 5462823 yclB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 aromatic acid decarboxylase YP_001420010.1 377997 D 326423 CDS YP_001420011.1 154684850 5462824 378620..380041 1 NC_009725.1 conserved hypothetical protein YclC; hypothetical protein 380041 yclC 5462824 yclC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420011.1 378620 D 326423 CDS YP_001420012.1 154684851 5460820 380059..380286 1 NC_009725.1 hypothetical protein YclD1; hypothetical protein 380286 yclD1 5460820 yclD1 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420012.1 380059 D 326423 CDS YP_001420013.1 154684852 5460821 380301..380747 1 NC_009725.1 hypothetical protein YclD2; hypothetical protein 380747 yclD2 5460821 yclD2 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420013.1 380301 D 326423 CDS YP_001420014.1 154684853 5460822 complement(380790..382268) 1 NC_009725.1 di-tripeptide ABC transporter, permease YclF; hypothetical protein 382268 yclF 5460822 yclF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420014.1 380790 R 326423 CDS YP_001420015.1 154684854 5460823 382547..384292 1 NC_009725.1 hypothetical protein YclG; hypothetical protein 384292 yclG 5460823 yclG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420015.1 382547 D 326423 CDS YP_001420016.1 154684855 5460824 complement(384384..384605) 1 NC_009725.1 hypothetical protein YczF; hypothetical protein 384605 yczF 5460824 yczF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420016.1 384384 R 326423 CDS YP_001420017.1 154684856 5461945 384728..386368 1 NC_009725.1 spore germination protein GerKA; GerKA 386368 gerKA 5461945 gerKA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GerKA YP_001420017.1 384728 D 326423 CDS YP_001420018.1 154684857 5461946 386355..387581 1 NC_009725.1 germination response protein GerKC; GerKC 387581 gerKC 5461946 gerKC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GerKC YP_001420018.1 386355 D 326423 CDS YP_001420019.1 154684858 5461947 387606..388724 1 NC_009725.1 germination response protein GerKB; GerKB 388724 gerKB 5461947 gerKB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GerKB YP_001420019.1 387606 D 326423 CDS YP_001420020.1 154684859 5461948 388896..390218 1 NC_009725.1 nitrilotriacetate monooxygenase like protein YxeK; hypothetical protein 390218 yxeK 5461948 yxeK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420020.1 388896 D 326423 CDS YP_001420021.1 154684860 5461949 390232..390723 1 NC_009725.1 conserved hypothetical protein YxeL; hypothetical protein 390723 yxeL 5461949 yxeL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420021.1 390232 D 326423 CDS YP_001420022.1 154684861 5460620 390752..391543 1 NC_009725.1 amino-acid ABC transporter binding protein YxeM; hypothetical protein 391543 yxeM 5460620 yxeM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420022.1 390752 D 326423 CDS YP_001420023.1 154684862 5460621 391566..392240 1 NC_009725.1 amino acid ABC transporter (permease); possibly involved in opine transport; hypothetical protein 392240 yxeN 5460621 yxeN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420023.1 391566 D 326423 CDS YP_001420024.1 154684863 5460622 392254..393003 1 NC_009725.1 probable amino acid ABC transporter (ATP-binding protein) YxeO; hypothetical protein 393003 yxeO 5460622 yxeO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420024.1 392254 D 326423 CDS YP_001420025.1 154684864 5460623 393021..394172 1 NC_009725.1 conserved hypothetical protein YxeP; hypothetical protein 394172 yxeP 5460623 yxeP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420025.1 393021 D 326423 CDS YP_001420026.1 154684865 5460624 394169..395515 1 NC_009725.1 conserved hypothetical protein YxeQ; hypothetical protein 395515 yxeQ 5460624 yxeQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420026.1 394169 D 326423 CDS YP_001420027.1 154684866 5459911 complement(395619..396302) 1 NC_009725.1 ABC transporter (ATPase component) YclH; hypothetical protein 396302 yclH 5459911 yclH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420027.1 395619 R 326423 CDS YP_001420028.1 154684867 5459912 complement(396317..397753) 1 NC_009725.1 ABC transporter (permease) YclI; hypothetical protein 397753 yclI 5459912 yclI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420028.1 396317 R 326423 CDS YP_001420029.1 154684868 5459913 397966..398649 1 NC_009725.1 two component response regulator; COG0745, OmpR family consisting of a CheY-like receiver domain and a winged helix DNA-binding domain; hypothetical protein 398649 yclJ 5459913 yclJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420029.1 397966 D 326423 CDS YP_001420030.1 154684869 5459914 398639..400069 1 NC_009725.1 signal transduction sensor histidin kinase; COG0642; part of a signal transduction two component system; hypothetical protein 400069 yclK 5459914 yclK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420030.1 398639 D 326423 CDS YP_001420031.1 154684870 5459915 400222..401370 1 NC_009725.1 response regulator aspartate phosphatase; cd00189, TPR, tetratricopeptide repeat domain; RapC 401370 rapC 5459915 rapC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 RapC YP_001420031.1 400222 D 326423 CDS YP_001420032.1 154684871 5461808 401360..401473 1 NC_009725.1 inhibitory peptide of RapC; RapC phosphatase regulator/competence and sporulation stimulating factor (CSF); PhrC 401473 phrC 5461808 phrC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 PhrC YP_001420032.1 401360 D 326423 CDS YP_001420033.1 154684872 5461809 complement(401622..401717) 1 NC_009725.1 hypothetical protein 401717 5461809 RBAM_004030 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420033.1 401622 R 326423 CDS YP_001420034.1 154684873 5461810 complement(401812..403176) 1 NC_009725.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; lysine and threonine sensitive; aspartate kinase 403176 yclM 5461810 yclM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 aspartate kinase YP_001420034.1 401812 R 326423 CDS YP_001420035.1 154684874 5461811 403590..404543 1 NC_009725.1 ferrichrome ABC transporter (permease) YclN; hypothetical protein 404543 yclN 5461811 yclN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420035.1 403590 D 326423 CDS YP_001420036.1 154684875 5461812 404533..405480 1 NC_009725.1 ferrichrome ABC transporter (permease) YclO; hypothetical protein 405480 yclO 5461812 yclO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420036.1 404533 D 326423 CDS YP_001420037.1 154684876 5460197 405474..406232 1 NC_009725.1 ferrichrome ABC transporter (ATP-binding protein) YclP; hypothetical protein 406232 yclP 5460197 yclP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420037.1 405474 D 326423 CDS YP_001420038.1 154684877 5460198 406254..407198 1 NC_009725.1 ferrichrome ABC transporter (periplasmic binding protein); hypothetical protein 407198 yclQ 5460198 yclQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420038.1 406254 D 326423 CDS YP_001420039.1 154684878 5460199 complement(407240..408664) 1 NC_009725.1 multidrug resistance protein YcnB; hypothetical protein 408664 ycnB 5460199 ycnB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420039.1 407240 R 326423 CDS YP_001420040.1 154684879 5460200 complement(408682..409557) 1 NC_009725.1 transcription regulator TetR/AcrR family like protein YcnC; hypothetical protein 409557 ycnC 5460200 ycnC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420040.1 408682 R 326423 CDS YP_001420041.1 154684880 5460201 complement(409718..410464) 1 NC_009725.1 NADPH-flavin oxidoreductase YcnD; hypothetical protein 410464 ycnD 5460201 ycnD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420041.1 409718 R 326423 CDS YP_001420042.1 154684881 5463282 complement(410481..410768) 1 NC_009725.1 conserved hypothetical protein YcnE; hypothetical protein 410768 ycnE 5463282 ycnE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420042.1 410481 R 326423 CDS YP_001420043.1 154684882 5463283 410910..411224 1 NC_009725.1 transcription regulator ArsR family like protein YczG; hypothetical protein 411224 yczG 5463283 yczG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420043.1 410910 D 326423 CDS YP_001420044.1 154684883 5463284 complement(411252..412661) 1 NC_009725.1 transcriptional regulator (GntR/MocR family) GabR; GabR 412661 gabR 5463284 gabR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GabR YP_001420044.1 411252 R 326423 CDS YP_001420045.1 154684884 5463285 412865..414076 1 NC_009725.1 catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; 4-aminobutyrate aminotransferase 414076 gabT 5463285 gabT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 4-aminobutyrate aminotransferase YP_001420045.1 412865 D 326423 CDS YP_001420046.1 154684885 5463286 414182..415570 1 NC_009725.1 succinate-semialdehyde dehydrogenase GabD; GabD 415570 gabD 5463286 gabD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GabD YP_001420046.1 414182 D 326423 CDS YP_001420047.1 154684886 5461675 415725..416588 1 NC_009725.1 glucose uptake protein GlcU; GlcU 416588 glcU 5461675 glcU Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GlcU YP_001420047.1 415725 D 326423 CDS YP_001420048.1 154684887 5461676 416609..417394 1 NC_009725.1 Converts glucose to D-glucono-1,5 lactone; glucose-1-dehydrogenase 417394 gdh 5461676 gdh Bacillus amyloliquefaciens subsp. plantarum str. FZB42 glucose-1-dehydrogenase YP_001420048.1 416609 D 326423 CDS YP_001420049.1 154684888 5461677 complement(417440..418051) 1 NC_009725.1 conserved hypothetical protein YcnI; hypothetical protein 418051 ycnI 5461677 ycnI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420049.1 417440 R 326423 CDS YP_001420050.1 154684889 5461678 complement(418064..419692) 1 NC_009725.1 copper export protein YcnJ; hypothetical protein 419692 ycnJ 5461678 ycnJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420050.1 418064 R 326423 CDS YP_001420051.1 154684890 5461679 complement(419725..420297) 1 NC_009725.1 transcription regulator (DeoR family) YcnK; hypothetical protein 420297 ycnK 5461679 ycnK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420051.1 419725 R 326423 CDS YP_001420052.1 154684891 5459965 420477..420818 1 NC_009725.1 hypothetical protein YcnL; hypothetical protein 420818 ycnL 5459965 ycnL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420052.1 420477 D 326423 CDS YP_001420053.1 154684892 5459966 421001..422434 1 NC_009725.1 phosphotransferase system (PTS) mannitol-specific enzyme IIABC component MtlA; hypothetical protein 422434 mtlA 5459966 mtlA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420053.1 421001 D 326423 CDS YP_001420054.1 154684893 5459967 422460..422891 1 NC_009725.1 PTS mannitol-specific enzyme IIA component 422891 5459967 RBAM_004240 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 PTS mannitol-specific enzyme IIA component YP_001420054.1 422460 D 326423 CDS YP_001420055.1 154684894 5459968 422893..424014 1 NC_009725.1 mannitol-1-phosphate dehydrogenase MtlD; mannitol-1-phosphate 5-dehydrogenase 424014 mtlD 5459968 mtlD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 mannitol-1-phosphate 5-dehydrogenase YP_001420055.1 422893 D 326423 CDS YP_001420056.1 154684895 5459969 424083..424478 1 NC_009725.1 conserved hypothetical protein YcsD; hypothetical protein 424478 ycsD 5459969 ycsD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420056.1 424083 D 326423 CDS YP_001420057.1 154684896 5460649 424809..425558 1 NC_009725.1 conserved hypothetical protein YcsE; hypothetical protein 425558 ycsE 5460649 ycsE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420057.1 424809 D 326423 CDS YP_001420058.1 154684897 5460650 425764..426528 1 NC_009725.1 lactam utilization protein YcsF; LamB/YcsF family protein 426528 ycsF 5460650 ycsF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 LamB/YcsF family protein YP_001420058.1 425764 D 326423 CDS YP_001420059.1 154684898 5460651 426551..427765 1 NC_009725.1 conserved hypothetical protein YcsG; hypothetical protein 427765 ycsG 5460651 ycsG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420059.1 426551 D 326423 CDS YP_001420060.1 154684899 5460652 427770..428564 1 NC_009725.1 conserved hypothetical protein YcsI; hypothetical protein 428564 ycsI 5460652 ycsI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420060.1 427770 D 326423 CDS YP_001420061.1 154684900 5460653 428594..429325 1 NC_009725.1 sporulation inhibitor KipI; KipI 429325 kipI 5460653 kipI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 KipI YP_001420061.1 428594 D 326423 CDS YP_001420062.1 154684901 5460639 429322..430335 1 NC_009725.1 kipI antagonist KipA; KipA 430335 kipA 5460639 kipA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 KipA YP_001420062.1 429322 D 326423 CDS YP_001420063.1 154684902 5460640 430353..431102 1 NC_009725.1 HTH-type transcriptional regulator (kip operon repressor) KipR; KipR 431102 kipR 5460640 kipR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 KipR YP_001420063.1 430353 D 326423 CDS YP_001420064.1 154684903 5460641 431167..431808 1 NC_009725.1 conserved hypothetical protein YcsK; hypothetical protein 431808 ycsK 5460641 ycsK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420064.1 431167 D 326423 CDS YP_001420065.1 154684904 5460642 431974..432219 1 NC_009725.1 hypothetical protein YczI; hypothetical protein 432219 yczI 5460642 yczI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420065.1 431974 D 326423 CDS YP_001420066.1 154684905 5460643 complement(432190..432510) 1 NC_009725.1 conserved hypothetical protein YczJ; hypothetical protein 432510 yczJ 5460643 yczJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420066.1 432190 R 326423 CDS YP_001420067.1 154684906 5460515 432667..434670 1 NC_009725.1 penicillin-binding protein III PbpC; PbpC 434670 pbpC 5460515 pbpC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 PbpC YP_001420067.1 432667 D 326423 CDS YP_001420068.1 154684907 5460516 434784..435686 1 NC_009725.1 aryl-alcohol dehydrogenase YcsN; hypothetical protein 435686 ycsN 5460516 ycsN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420068.1 434784 D 326423 CDS YP_001420069.1 154684908 5460517 435986..438070 1 NC_009725.1 transcriptional antiterminator MtlR; hypothetical protein 438070 mtlR 5460517 mtlR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420069.1 435986 D 326423 CDS YP_001420070.1 154684909 5460518 438292..439806 1 NC_009725.1 acid-CoA ligase YdaB; hypothetical protein 439806 ydaB 5460518 ydaB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420070.1 438292 D 326423 CDS YP_001420071.1 154684910 5460519 439935..440825 1 NC_009725.1 alcohol dehydrogenase YdaD; short chain dehydrogenase 440825 ydaD 5460519 ydaD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 short chain dehydrogenase YP_001420071.1 439935 D 326423 CDS YP_001420072.1 154684911 5461625 440838..441341 1 NC_009725.1 conserved hypothetical protein YdaE; hypothetical protein 441341 ydaE 5461625 ydaE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420072.1 440838 D 326423 CDS YP_001420073.1 154684912 5461626 441429..442052 1 NC_009725.1 acetyltransferase YdaF; hypothetical protein 442052 ydaF 5461626 ydaF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420073.1 441429 D 326423 CDS YP_001420074.1 154684913 5461627 442059..442481 1 NC_009725.1 general stress protein YdaG; hypothetical protein 442481 ydaG 5461627 ydaG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420074.1 442059 D 326423 CDS YP_001420075.1 154684914 5461628 442979..443788 1 NC_009725.1 hypothetical protein YdaH; hypothetical protein 443788 ydaH 5461628 ydaH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420075.1 442979 D 326423 CDS YP_001420076.1 154684915 5461629 complement(443826..444116) 1 NC_009725.1 conserved hypothetical protein YdzA; hypothetical protein 444116 ydzA 5461629 ydzA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420076.1 443826 R 326423 CDS YP_001420077.1 154684916 5459747 444293..444727 1 NC_009725.1 HTH-type transcriptional regulator LrpC; LrpC 444727 lrpC 5459747 lrpC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 LrpC YP_001420077.1 444293 D 326423 CDS YP_001420078.1 154684917 5459748 444791..446977 1 NC_009725.1 decatenates replicating daughter chromosomes; DNA topoisomerase III 446977 topB 5459748 topB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DNA topoisomerase III YP_001420078.1 444791 D 326423 CDS YP_001420079.1 154684918 5459749 447211..448296 1 NC_009725.1 hypothetical protein YdaJ; hypothetical protein 448296 ydaJ 5459749 ydaJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420079.1 447211 D 326423 CDS YP_001420080.1 154684919 5459750 448277..449125 1 NC_009725.1 conserved hypothetical protein YdaK; hypothetical protein 449125 ydaK 5459750 ydaK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420080.1 448277 D 326423 CDS YP_001420081.1 154684920 5459751 449115..450842 1 NC_009725.1 hypothetical protein YdaL; hypothetical protein 450842 ydaL 5459751 ydaL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420081.1 449115 D 326423 CDS YP_001420082.1 154684921 5460851 450835..452097 1 NC_009725.1 cellulose synthase YdaM; hypothetical protein 452097 ydaM 5460851 ydaM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420082.1 450835 D 326423 CDS YP_001420083.1 154684922 5460852 452103..454208 1 NC_009725.1 hypothetical protein YdaN; hypothetical protein 454208 ydaN 5460852 ydaN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420083.1 452103 D 326423 CDS YP_001420084.1 154684923 5460853 454643..456463 1 NC_009725.1 conserved hypothetical protein YdaO; hypothetical protein 456463 ydaO 5460853 ydaO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420084.1 454643 D 326423 CDS YP_001420085.1 154684924 5460854 456517..456963 1 NC_009725.1 mutator protein MutT; hypothetical protein 456963 mutT 5460854 mutT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420085.1 456517 D 326423 CDS YP_001420086.1 154684925 5460855 457021..458742 1 NC_009725.1 catalyzes the formation of acetyl phosphate from pyruvate; pyruvate oxidase 458742 ydaP 5460855 ydaP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 pyruvate oxidase YP_001420086.1 457021 D 326423 CDS YP_001420087.1 154684926 5462010 complement(458872..459294) 1 NC_009725.1 hypothetical protein 459294 5462010 RBAM_004570 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420087.1 458872 R 326423 CDS YP_001420088.1 154684927 5462011 complement(459731..459943) 1 NC_009725.1 hypothetical protein YpzD; hypothetical protein 459943 ypzD 5462011 ypzD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420088.1 459731 R 326423 CDS YP_001420089.1 154684928 5462012 460247..460618 1 NC_009725.1 hypothetical protein 460618 5462012 RBAM_004590 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420089.1 460247 D 326423 CDS YP_001420090.1 154684929 5462013 460927..462060 1 NC_009725.1 response regulator aspartate phosphatase RapH; RapH 462060 rapH 5462013 rapH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 RapH YP_001420090.1 460927 D 326423 CDS YP_001420091.1 154684930 5462014 complement(462188..462352) 1 NC_009725.1 hypothetical protein 462352 5462014 RBAM_004610 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420091.1 462188 R 326423 CDS YP_001420092.1 154684931 5459699 complement(462542..462772) 1 NC_009725.1 hypothetical protein 462772 5459699 RBAM_004620 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420092.1 462542 R 326423 CDS YP_001420093.1 154684932 5459700 complement(463153..463710) 1 NC_009725.1 hypothetical protein 463710 5459700 RBAM_004630 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420093.1 463153 R 326423 CDS YP_001420094.1 154684933 5459701 complement(463807..464385) 1 NC_009725.1 hypothetical protein 464385 5459701 RBAM_004640 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420094.1 463807 R 326423 CDS YP_001420095.1 154684934 5459702 complement(464611..464877) 1 NC_009725.1 hypothetical protein 464877 5459702 RBAM_004650 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420095.1 464611 R 326423 CDS YP_001420096.1 154684935 5459703 complement(464982..466256) 1 NC_009725.1 manganese transport protein MntH 466256 mntH 5459703 mntH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 manganese transport protein MntH YP_001420096.1 464982 R 326423 CDS YP_001420097.1 154684936 5460059 complement(466328..466552) 1 NC_009725.1 hypothetical protein 466552 5460059 RBAM_004670 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420097.1 466328 R 326423 CDS YP_001420098.1 154684937 5460060 466915..467268 1 NC_009725.1 hypothetical protein 467268 5460060 RBAM_004680 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420098.1 466915 D 326423 CDS YP_001420099.1 154684938 5460061 complement(467318..467542) 1 NC_009725.1 hypothetical protein conserved protein YdaT; hypothetical protein 467542 ydaT 5460061 ydaT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420099.1 467318 R 326423 CDS YP_001420100.1 154684939 5460062 complement(467600..468007) 1 NC_009725.1 hypothetical protein YvaD; hypothetical protein 468007 yvaD 5460062 yvaD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420100.1 467600 R 326423 CDS YP_001420101.1 154684940 5460063 complement(468004..468369) 1 NC_009725.1 multidrug-efflux transporter YvaE; hypothetical protein 468369 yvaE 5460063 yvaE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420101.1 468004 R 326423 CDS YP_001420102.1 154684941 5463223 468536..469342 1 NC_009725.1 ABC transporter (binding protein) like protein YdbA; hypothetical protein 469342 ydbA 5463223 ydbA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420102.1 468536 D 326423 CDS YP_001420103.1 154684942 5463224 469443..469814 1 NC_009725.1 general stress protein GsiB; GsiB 469814 gsiB 5463224 gsiB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GsiB YP_001420103.1 469443 D 326423 CDS YP_001420104.1 154684943 5463225 469949..470308 1 NC_009725.1 conserved hypothetical protein YdbB; hypothetical protein 470308 ydbB 5463225 ydbB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420104.1 469949 D 326423 CDS YP_001420105.1 154684944 5463226 470283..470642 1 NC_009725.1 hypothetical protein YdbC; hypothetical protein 470642 ydbC 5463226 ydbC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420105.1 470283 D 326423 CDS YP_001420106.1 154684945 5463227 complement(470679..471500) 1 NC_009725.1 manganese-containing catalase YdbD; hypothetical protein 471500 ydbD 5463227 ydbD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420106.1 470679 R 326423 CDS YP_001420107.1 154684946 5462596 complement(471586..472638) 1 NC_009725.1 C4-dicarboxylate binding protein DctB; DctB 472638 dctB 5462596 dctB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DctB YP_001420107.1 471586 R 326423 CDS YP_001420108.1 154684947 5462597 472719..474341 1 NC_009725.1 C4-dicarboxylate sensor kinase; COG3290, signal transduction mechanism; DctS 474341 dctS 5462597 dctS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DctS YP_001420108.1 472719 D 326423 CDS YP_001420109.1 154684948 5462598 474316..474987 1 NC_009725.1 C4-dicarboxylate response regulator; COG4565, signal transduction mechanism; DctR 474987 dctR 5462598 dctR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DctR YP_001420109.1 474316 D 326423 CDS YP_001420110.1 154684949 5462599 475096..476352 1 NC_009725.1 involved in the transport of C4-dicarboxylates across the membrane; C4-dicarboxylate transporter DctA 476352 dctP 5462599 dctP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 C4-dicarboxylate transporter DctA YP_001420110.1 475096 D 326423 CDS YP_001420111.1 154684950 5462600 476538..477587 1 NC_009725.1 conserved hypothetical protein YdbI; hypothetical protein 477587 ydbI 5462600 ydbI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420111.1 476538 D 326423 CDS YP_001420112.1 154684951 5462815 477689..478615 1 NC_009725.1 ABC transporter (ATP-binding protein) YdbJ; hypothetical protein 478615 ydbJ 5462815 ydbJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420112.1 477689 D 326423 CDS YP_001420113.1 154684952 5462816 478608..479375 1 NC_009725.1 transcriptional control of biofilm formation; hypothetical protein 479375 ydbK 5462816 ydbK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420113.1 478608 D 326423 CDS YP_001420114.1 154684953 5462817 479470..479805 1 NC_009725.1 hypothetical protein YdbL; hypothetical protein 479805 ydbL 5462817 ydbL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420114.1 479470 D 326423 CDS YP_001420115.1 154684954 5462818 479960..481066 1 NC_009725.1 butyryl-CoA dehydrogenase YdbM; hypothetical protein 481066 ydbM 5462818 ydbM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420115.1 479960 D 326423 CDS YP_001420116.1 154684955 5462819 complement(481093..481239) 1 NC_009725.1 hypothetical protein YdbN; hypothetical protein 481239 ydbN 5462819 ydbN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420116.1 481093 R 326423 CDS YP_001420117.1 154684956 5460375 481619..482005 1 NC_009725.1 hypothetical protein YdbO1; hypothetical protein 482005 ydbO1 5460375 ydbO1 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420117.1 481619 D 326423 CDS YP_001420118.1 154684957 5460376 482005..482511 1 NC_009725.1 hypothetical protein YdbO2; hypothetical protein 482511 ydbO2 5460376 ydbO2 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420118.1 482005 D 326423 CDS YP_001420119.1 154684958 5460377 complement(482508..482825) 1 NC_009725.1 thiredoxin protein YdbP; hypothetical protein 482825 ydbP 5460377 ydbP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420119.1 482508 R 326423 CDS YP_001420120.1 154684959 5460378 483000..484064 1 NC_009725.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanyl-alanine synthetase A 484064 ddl 5460378 ddl Bacillus amyloliquefaciens subsp. plantarum str. FZB42 D-alanyl-alanine synthetase A YP_001420120.1 483000 D 326423 CDS YP_001420121.1 154684960 5460379 484141..485511 1 NC_009725.1 UDP-N-acetylmuramoylalanyl-D-glutamyl-2 6-diaminopimelate-D-alanyl-D-alanine ligase MurF; hypothetical protein 485511 murF 5460379 murF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420121.1 484141 D 326423 CDS YP_001420122.1 154684961 5461243 485791..487326 1 NC_009725.1 ATP-dependent RNA helicase YdbR; hypothetical protein 487326 ydbR 5461243 ydbR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420122.1 485791 D 326423 CDS YP_001420123.1 154684962 5461244 487440..487922 1 NC_009725.1 conserved hypothetical protein YdbS; hypothetical protein 487922 ydbS 5461244 ydbS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420123.1 487440 D 326423 CDS YP_001420124.1 154684963 5461245 487912..489378 1 NC_009725.1 conserved hypothetical protein YdbT; hypothetical protein 489378 ydbT 5461245 ydbT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420124.1 487912 D 326423 CDS YP_001420125.1 154684964 5461246 complement(489375..489974) 1 NC_009725.1 hypothetical protein YdcA; hypothetical protein 489974 ydcA 5461246 ydcA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420125.1 489375 R 326423 CDS YP_001420126.1 154684965 5461247 490067..490432 1 NC_009725.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 490432 acpS 5461247 acpS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 4'-phosphopantetheinyl transferase YP_001420126.1 490067 D 326423 CDS YP_001420127.1 154684966 5462917 490597..491604 1 NC_009725.1 conserved hypothetical protein YdcC; hypothetical protein 491604 ydcC 5462917 ydcC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420127.1 490597 D 326423 CDS YP_001420128.1 154684967 5462918 491721..492890 1 NC_009725.1 D-alanine racemase Alr; hypothetical protein 492890 alr 5462918 alr Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420128.1 491721 D 326423 CDS YP_001420129.1 154684968 5462919 493010..493291 1 NC_009725.1 hypothetical protein YdcD; hypothetical protein 493291 ydcD 5462919 ydcD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420129.1 493010 D 326423 CDS YP_001420130.1 154684969 5462920 493297..493647 1 NC_009725.1 conserved hypothetical protein YdcE; hypothetical protein 493647 ydcE 5462920 ydcE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420130.1 493297 D 326423 CDS YP_001420131.1 154684970 5462921 493765..494586 1 NC_009725.1 positive regulator of sigma-B activity RsbR; hypothetical protein 494586 rsbR 5462921 rsbR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420131.1 493765 D 326423 CDS YP_001420132.1 154684971 5461469 494591..494956 1 NC_009725.1 negative regulator of sigma-B activity (antagonist of RsbT) RsbS; RsbS 494956 rsbS 5461469 rsbS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 RsbS YP_001420132.1 494591 D 326423 CDS YP_001420133.1 154684972 5461470 494959..495360 1 NC_009725.1 serine/threonine-protein kinase rsbT (Switch protein/serine kinase) (Anti-sigma-B factor RsbT; RsbT 495360 rsbT 5461470 rsbT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 RsbT YP_001420133.1 494959 D 326423 CDS YP_001420134.1 154684973 5461471 495372..496379 1 NC_009725.1 sigma factor sigB regulation protein (phosphoserine phosphatase) RsbU; hypothetical protein 496379 rsbU 5461471 rsbU Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420134.1 495372 D 326423 CDS YP_001420135.1 154684974 5461472 496443..496772 1 NC_009725.1 anti-anti-sigma factor (antagonist of RsbW) RsbV; RsbV 496772 rsbV 5461472 rsbV Bacillus amyloliquefaciens subsp. plantarum str. FZB42 RsbV YP_001420135.1 496443 D 326423 CDS YP_001420136.1 154684975 5461473 496769..497251 1 NC_009725.1 binds to sigma-B preventing the formation of an RNA polymerase holoenzyme; serine-protein kinase RsbW 497251 rsbW 5461473 rsbW Bacillus amyloliquefaciens subsp. plantarum str. FZB42 serine-protein kinase RsbW YP_001420136.1 496769 D 326423 CDS YP_001420137.1 154684976 5462566 497217..498005 1 NC_009725.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma B is not essential for sporulation; rather it is required for maximal expression of ctc and csbA which are transcribed in the early stationary phase under conditions inimical to sporulation; induced by heat shock, salt stress, oxidative stress, glucose limitation, oxygen limitation and entry into stationary phase; RNA polymerase sigma factor SigB 498005 sigB 5462566 sigB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 RNA polymerase sigma factor SigB YP_001420137.1 497217 D 326423 CDS YP_001420138.1 154684977 5462567 498005..498607 1 NC_009725.1 sigma-B activity indirect negative regulator RsbX; RsbX 498607 rsbX 5462567 rsbX Bacillus amyloliquefaciens subsp. plantarum str. FZB42 RsbX YP_001420138.1 498005 D 326423 CDS YP_001420139.1 154684978 5462568 498680..500839 1 NC_009725.1 conserved hypothetical protein YdcI; hypothetical protein 500839 ydcI 5462568 ydcI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420139.1 498680 D 326423 CDS YP_001420140.1 154684979 5462569 complement(500849..500962) 1 NC_009725.1 hypothetical protein 500962 5462569 RBAM_005100 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420140.1 500849 R 326423 CDS YP_001420141.1 154684980 5462570 501062..501511 1 NC_009725.1 conserved hypothetical protein YdcK; hypothetical protein 501511 ydcK 5462570 ydcK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420141.1 501062 D 326423 CDS YP_001420142.1 154684981 5460679 502817..503341 1 NC_009725.1 conserved hypothetical protein YrkL; hypothetical protein 503341 yrkL 5460679 yrkL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420142.1 502817 D 326423 CDS YP_001420143.1 154684982 5460868 complement(503529..503942) 1 NC_009725.1 hypothetical protein 503942 5460868 RBAM_005200 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420143.1 503529 R 326423 CDS YP_001420144.1 154684983 5460869 complement(503986..504756) 1 NC_009725.1 conserved hypothetical protein YddR; hypothetical protein 504756 yddR 5460869 yddR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420144.1 503986 R 326423 CDS YP_001420145.1 154684984 5460870 504930..505340 1 NC_009725.1 transcriptional regulator (Lrp/AsnC family) LrpA; LrpA 505340 lrpA 5460870 lrpA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 LrpA YP_001420145.1 504930 D 326423 CDS YP_001420146.1 154684985 5460871 505957..506769 1 NC_009725.1 hypothetical protein 506769 5460871 RBAM_005230 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420146.1 505957 D 326423 CDS YP_001420147.1 154684986 5460872 506824..506958 1 NC_009725.1 hypothetical protein 506958 5460872 RBAM_005240 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420147.1 506824 D 326423 CDS YP_001420148.1 154684987 5459651 507659..507811 1 NC_009725.1 hypothetical protein 507811 5459651 RBAM_005250 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420148.1 507659 D 326423 CDS YP_001420149.1 154684988 5459652 507980..509383 1 NC_009725.1 permease 509383 5459652 RBAM_005260 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 permease YP_001420149.1 507980 D 326423 CDS YP_001420150.1 154684989 5459653 509723..510037 1 NC_009725.1 transcriptional regulato 510037 5459653 RBAM_005270 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 transcriptional regulato YP_001420150.1 509723 D 326423 CDS YP_001420151.1 154684990 5459654 510198..510680 1 NC_009725.1 hypothetical protein YddJ; hypothetical protein 510680 yddJ 5459654 yddJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420151.1 510198 D 326423 CDS YP_001420152.1 154684991 5459655 510677..511102 1 NC_009725.1 conserved hypothetical protein YdeM; hypothetical protein 511102 ydeM 5459655 ydeM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420152.1 510677 D 326423 CDS YP_001420153.1 154684992 5463287 complement(511366..511707) 1 NC_009725.1 hypothetical protein 511707 5463287 RBAM_005300 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420153.1 511366 R 326423 CDS YP_001420154.1 154684993 5463288 complement(512050..512493) 1 NC_009725.1 conserved hypothetical protein yYwnA1; hypothetical protein 512493 ywnA1 5463288 ywnA1 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420154.1 512050 R 326423 CDS YP_001420155.1 154684994 5463289 512691..513329 1 NC_009725.1 conserved hypothetical protein YwnB; hypothetical protein 513329 ywnB 5463289 ywnB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420155.1 512691 D 326423 CDS YP_001420156.1 154684995 5463290 514054..514629 1 NC_009725.1 hypothetical protein 514629 5463290 RBAM_005330 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420156.1 514054 D 326423 CDS YP_001420157.1 154684996 5463291 514687..515436 1 NC_009725.1 oxidoreductase 515436 5463291 RBAM_005340 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 oxidoreductase YP_001420157.1 514687 D 326423 CDS YP_001420158.1 154684997 5462078 515761..516774 1 NC_009725.1 hypothetical protein 516774 5462078 RBAM_005350 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420158.1 515761 D 326423 CDS YP_001420159.1 154684998 5462079 complement(517642..518616) 1 NC_009725.1 hypothetical protein 518616 5462079 RBAM_005360 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420159.1 517642 R 326423 CDS YP_001420160.1 154684999 5462080 518794..519129 1 NC_009725.1 transcriptional regulator 519129 5462080 RBAM_005370 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 transcriptional regulator YP_001420160.1 518794 D 326423 CDS YP_001420161.1 154685000 5462081 complement(519671..520699) 1 NC_009725.1 putitative fatty acid desaturase 520699 5462081 RBAM_005380 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 putitative fatty acid desaturase YP_001420161.1 519671 R 326423 CDS YP_001420162.1 154685001 5462082 521046..521201 1 NC_009725.1 hypothetical protein 521201 5462082 RBAM_005390 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420162.1 521046 D 326423 CDS YP_001420163.1 154685002 5460885 521421..521624 1 NC_009725.1 cold shock protein; involved in elicitation of plant basal defence; hypothetical protein 521624 cspC 5460885 cspC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420163.1 521421 D 326423 CDS YP_001420164.1 154685003 5460886 complement(522288..522749) 1 NC_009725.1 conserved hypothetical protein YdeB; hypothetical protein 522749 ydeB 5460886 ydeB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420164.1 522288 R 326423 CDS YP_001420165.1 154685004 5460887 523350..523610 1 NC_009725.1 conserved hypothetical protein YrkD; hypothetical protein 523610 yrkD 5460887 yrkD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420165.1 523350 D 326423 CDS YP_001420166.1 154685005 5460888 523771..524253 1 NC_009725.1 conserved hypothetical protein YrkE; hypothetical protein 524253 yrkE 5460888 yrkE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420166.1 523771 D 326423 CDS YP_001420167.1 154685006 5460889 524287..524655 1 NC_009725.1 rhodanese-like domain-containing protein 524655 5460889 RBAM_005440 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 rhodanese-like domain-containing protein YP_001420167.1 524287 D 326423 CDS YP_001420168.1 154685007 5462752 524715..525281 1 NC_009725.1 conserved hypothetical protein YrkF; hypothetical protein 525281 yrkF 5462752 yrkF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420168.1 524715 D 326423 CDS YP_001420169.1 154685008 5462753 525524..526411 1 NC_009725.1 conserved hypothetical protein YrkH; hypothetical protein 526411 yrkH 5462753 yrkH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420169.1 525524 D 326423 CDS YP_001420170.1 154685009 5462754 526445..526672 1 NC_009725.1 conserved hypothetical protein YrkI; hypothetical protein 526672 yrkI 5462754 yrkI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420170.1 526445 D 326423 CDS YP_001420171.1 154685010 5462755 526732..527508 1 NC_009725.1 conserved hypothetical protein YrkJ; hypothetical protein 527508 yrkJ 5462755 yrkJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420171.1 526732 D 326423 CDS YP_001420172.1 154685011 5462756 528210..528890 1 NC_009725.1 aspartate racemase RacX; hypothetical protein 528890 racX 5462756 racX Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420172.1 528210 D 326423 CDS YP_001420173.1 154685012 5460981 complement(528998..529567) 1 NC_009725.1 hypothetical protein 529567 5460981 RBAM_005500 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420173.1 528998 R 326423 CDS YP_001420174.1 154685013 5460982 complement(529554..529871) 1 NC_009725.1 transcriptional regulator 529871 5460982 RBAM_005510 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 transcriptional regulator YP_001420174.1 529554 R 326423 CDS YP_001420175.1 154685014 5460983 530225..531130 1 NC_009725.1 conserved hypothetical protein YbfA; hypothetical protein 531130 ybfA 5460983 ybfA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420175.1 530225 D 326423 CDS YP_001420176.1 154685015 5460984 531147..532439 1 NC_009725.1 hypothetical protein YbfB; hypothetical protein 532439 ybfB 5460984 ybfB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420176.1 531147 D 326423 CDS YP_001420177.1 154685016 5460985 complement(532534..533499) 1 NC_009725.1 conserved hypothetical protein YvdO; hypothetical protein 533499 yvdO 5460985 yvdO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420177.1 532534 R 326423 CDS YP_001420178.1 154685017 5460274 533700..534176 1 NC_009725.1 hypothetical protein 534176 5460274 RBAM_005550 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420178.1 533700 D 326423 CDS YP_001420179.1 154685018 5460275 534212..534574 1 NC_009725.1 hypothetical protein 534574 5460275 RBAM_005560 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420179.1 534212 D 326423 CDS YP_001420180.1 154685019 5460276 535179..535499 1 NC_009725.1 hypothetical protein 535499 5460276 RBAM_005570 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420180.1 535179 D 326423 CDS YP_001420181.1 154685020 5460277 535899..537245 1 NC_009725.1 conserved hypothetical protein YvdP; hypothetical protein 537245 yvdP 5460277 yvdP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420181.1 535899 D 326423 CDS YP_001420182.1 154685021 5460278 complement(537319..537741) 1 NC_009725.1 hypothetical protein 537741 5460278 RBAM_005590 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420182.1 537319 R 326423 CDS YP_001420183.1 154685022 5461288 537934..538875 1 NC_009725.1 cation-efflux system membrane protein CzcD; CzcD 538875 czcD 5461288 czcD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 CzcD YP_001420183.1 537934 D 326423 CDS YP_001420184.1 154685023 5461289 538939..539976 1 NC_009725.1 potassium uptake protein TrkA; hypothetical protein 539976 trkA 5461289 trkA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420184.1 538939 D 326423 CDS YP_001420185.1 154685024 5461290 540979..541512 1 NC_009725.1 conserved hypothetical protein YrkC; hypothetical protein 541512 yrkC 5461290 yrkC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420185.1 540979 D 326423 CDS YP_001420186.1 154685025 5461291 complement(541785..542267) 1 NC_009725.1 hypothetical protein YkkA; hypothetical protein 542267 ykkA 5461291 ykkA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420186.1 541785 R 326423 CDS YP_001420187.1 154685026 5461292 542505..543299 1 NC_009725.1 hypothetical protein 543299 5461292 RBAM_005640 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420187.1 542505 D 326423 CDS YP_001420188.1 154685027 5463019 543330..543647 1 NC_009725.1 hypothetical protein 543647 5463019 RBAM_005650 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420188.1 543330 D 326423 CDS YP_001420189.1 154685028 5463020 543799..544848 1 NC_009725.1 chloramphenicol/florfenicol resistance protein 544848 5463020 RBAM_005660 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 chloramphenicol/florfenicol resistance protein YP_001420189.1 543799 D 326423 CDS YP_001420190.1 154685029 5463021 544957..545337 1 NC_009725.1 hypothetical protein YdeH; hypothetical protein 545337 ydeH 5463021 ydeH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420190.1 544957 D 326423 CDS YP_001420191.1 154685030 5463022 545606..546070 1 NC_009725.1 hypothetical protein 546070 5463022 RBAM_005680 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420191.1 545606 D 326423 CDS YP_001420192.1 154685031 5463023 546067..547077 1 NC_009725.1 hypothetical protein 547077 5463023 RBAM_005690 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420192.1 546067 D 326423 CDS YP_001420193.1 154685032 5461188 547074..547832 1 NC_009725.1 hypothetical protein 547832 5461188 RBAM_005700 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420193.1 547074 D 326423 CDS YP_001420194.1 154685033 5461189 547847..548665 1 NC_009725.1 phosphomethylpyrimidine kinase 548665 5461189 RBAM_005710 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 phosphomethylpyrimidine kinase YP_001420194.1 547847 D 326423 CDS YP_001420195.1 154685034 5461190 548677..549912 1 NC_009725.1 hypothetical protein 549912 5461190 RBAM_005720 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420195.1 548677 D 326423 CDS YP_001420196.1 154685035 5461191 550101..551063 1 NC_009725.1 hypothetical protein 551063 5461191 RBAM_005730 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420196.1 550101 D 326423 CDS YP_001420197.1 154685036 5461192 complement(551123..552172) 1 NC_009725.1 NADP-dependent alcohol dehydrogenase AdhA; hypothetical protein 552172 adhA 5461192 adhA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420197.1 551123 R 326423 CDS YP_001420198.1 154685037 5459781 552332..552736 1 NC_009725.1 transcriptional regulator YraB; hypothetical protein 552736 yraB 5459781 yraB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420198.1 552332 D 326423 CDS YP_001420199.1 154685038 5459782 552960..554249 1 NC_009725.1 Na+/H+ antiporter 554249 5459782 RBAM_005760 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 Na+/H+ antiporter YP_001420199.1 552960 D 326423 CDS YP_001420200.1 154685039 5459783 complement(554280..555662) 1 NC_009725.1 GntR family transcriptional regulator 555662 5459783 RBAM_005770 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GntR family transcriptional regulator YP_001420200.1 554280 R 326423 CDS YP_001420201.1 154685040 5459784 555780..556400 1 NC_009725.1 transcriptional repressor of sporulation and degradative enzymes production 556400 5459784 RBAM_005780 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 transcriptional repressor of sporulation and degradative enzymes production YP_001420201.1 555780 D 326423 CDS YP_001420202.1 154685041 5459785 557018..557626 1 NC_009725.1 hypothetical protein 557626 5459785 RBAM_005790 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420202.1 557018 D 326423 CDS YP_001420203.1 154685042 5461481 557598..558284 1 NC_009725.1 COG0745, OmpR like response regulator consisting of a CheY-like receiver domain and a winged helix-DNA-binding domain [signal transduction]; two-component response regulator 558284 5461481 RBAM_005800 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 two-component response regulator YP_001420203.1 557598 D 326423 CDS YP_001420204.1 154685043 5461482 558281..559354 1 NC_009725.1 COG0642, signal transduction histidine kinase; two-component sensor histidine kinase 559354 5461482 RBAM_005810 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 two-component sensor histidine kinase YP_001420204.1 558281 D 326423 CDS YP_001420205.1 154685044 5461483 559481..560110 1 NC_009725.1 hypothetical protein 560110 5461483 RBAM_005820 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420205.1 559481 D 326423 CDS YP_001420206.1 154685045 5461484 complement(560202..561392) 1 NC_009725.1 hypothetical protein YdeR; hypothetical protein 561392 ydeR 5461484 ydeR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420206.1 560202 R 326423 CDS YP_001420207.1 154685046 5461485 561642..562229 1 NC_009725.1 conserved hypothetical protein YdeS; hypothetical protein 562229 ydeS 5461485 ydeS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420207.1 561642 D 326423 CDS YP_001420208.1 154685047 5459704 complement(562307..563191) 1 NC_009725.1 conserved hypothetical protein YdeK; hypothetical protein 563191 ydeK 5459704 ydeK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420208.1 562307 R 326423 CDS YP_001420209.1 154685048 5459705 563318..564706 1 NC_009725.1 transcriptional regulator (GntR family)YdeL; hypothetical protein 564706 ydeL 5459705 ydeL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420209.1 563318 D 326423 CDS YP_001420210.1 154685049 5459706 complement(564772..565071) 1 NC_009725.1 spore coat protein YraD; hypothetical protein 565071 yraD 5459706 yraD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420210.1 564772 R 326423 CDS YP_001420211.1 154685050 5459707 complement(565087..565284) 1 NC_009725.1 spore coat protein YraE; hypothetical protein 565284 yraE 5459707 yraE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420211.1 565087 R 326423 CDS YP_001420212.1 154685051 5459708 complement(565303..566439) 1 NC_009725.1 alcohol dehydrogenase AdhB; hypothetical protein 566439 adhB 5459708 adhB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420212.1 565303 R 326423 CDS YP_001420213.1 154685052 5461248 complement(566458..566826) 1 NC_009725.1 spore coat protein YraF; hypothetical protein 566826 yraF 5461248 yraF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420213.1 566458 R 326423 CDS YP_001420214.1 154685053 5461249 complement(566844..567089) 1 NC_009725.1 spore coat protein YraG; hypothetical protein 567089 yraG 5461249 yraG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420214.1 566844 R 326423 CDS YP_001420215.1 154685054 5461250 567588..568805 1 NC_009725.1 sensor histidine kinase; COG4585, signal transduction; hypothetical protein 568805 ydfH 5461250 ydfH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420215.1 567588 D 326423 CDS YP_001420216.1 154685055 5461251 568798..569433 1 NC_009725.1 two-component response regulator; COG2197, CitB like response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; hypothetical protein 569433 ydfI 5461251 ydfI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420216.1 568798 D 326423 CDS YP_001420217.1 154685056 5461252 569532..571685 1 NC_009725.1 antibiotic transport-associated protein YdfJ; hypothetical protein 571685 ydfJ 5461252 ydfJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420217.1 569532 D 326423 CDS YP_001420218.1 154685057 5459764 complement(571719..572441) 1 NC_009725.1 glutamine amidotransferase 572441 5459764 RBAM_005950 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 glutamine amidotransferase YP_001420218.1 571719 R 326423 CDS YP_001420219.1 154685058 5459765 complement(572567..574195) 1 NC_009725.1 ABC transporter, ATPase component ExpZ; ExpZ 574195 expZ 5459765 expZ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ExpZ YP_001420219.1 572567 R 326423 CDS YP_001420220.1 154685059 5459766 complement(574473..575000) 1 NC_009725.1 conserved hypothetical protein YnaD; hypothetical protein 575000 ynaD 5459766 ynaD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420220.1 574473 R 326423 CDS YP_001420221.1 154685060 5459767 complement(575116..575973) 1 NC_009725.1 hypothetical protein 575973 5459767 RBAM_005980 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420221.1 575116 R 326423 CDS YP_001420222.1 154685061 5459768 576286..577389 1 NC_009725.1 forms dimers and octamers; involved in conversion of glycerol to dihydroxy-acetone; glycerol dehydrogenase 577389 gldA 5459768 gldA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 glycerol dehydrogenase YP_001420222.1 576286 D 326423 CDS YP_001420223.1 154685062 5460873 577535..578746 1 NC_009725.1 bicyclomycin resistance protein YdgK; hypothetical protein 578746 ydgK 5460873 ydgK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420223.1 577535 D 326423 CDS YP_001420224.1 154685063 5460874 complement(578775..580010) 1 NC_009725.1 beta-ketoacyl-acyl carrier protein synthase II 580010 5460874 RBAM_006010 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 beta-ketoacyl-acyl carrier protein synthase II YP_001420224.1 578775 R 326423 CDS YP_001420225.1 154685064 5460875 580119..580958 1 NC_009725.1 hypothetical protein 580958 5460875 RBAM_006020 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420225.1 580119 D 326423 CDS YP_001420226.1 154685065 5460876 complement(580998..581756) 1 NC_009725.1 membrane spanning protein YdhB; hypothetical protein 581756 ydhB 5460876 ydhB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420226.1 580998 R 326423 CDS YP_001420227.1 154685066 5460877 complement(581899..582357) 1 NC_009725.1 diamine N-acetyltransferase BltD; BltD 582357 bltD 5460877 bltD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 BltD YP_001420227.1 581899 R 326423 CDS YP_001420228.1 154685067 5461510 582489..583310 1 NC_009725.1 transcriptional regulator of bltD operon BltR; BltR 583310 bltR 5461510 bltR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 BltR YP_001420228.1 582489 D 326423 CDS YP_001420229.1 154685068 5461511 583526..584398 1 NC_009725.1 hypothetical protein YdzE; hypothetical protein 584398 ydzE 5461511 ydzE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420229.1 583526 D 326423 CDS YP_001420230.1 154685069 5461512 584574..585191 1 NC_009725.1 mutator MutT protein homolog YjhB; hypothetical protein 585191 yjhB 5461512 yjhB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420230.1 584574 D 326423 CDS YP_001420231.1 154685070 5461513 585227..586009 1 NC_009725.1 hypothetical protein 586009 5461513 RBAM_006080 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420231.1 585227 D 326423 CDS YP_001420232.1 154685071 5461514 complement(586058..586906) 1 NC_009725.1 hypothetical protein YcsA; hypothetical protein 586906 ycsA 5461514 ycsA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420232.1 586058 R 326423 CDS YP_001420233.1 154685072 5463094 587228..587914 1 NC_009725.1 transcriptional regulator YdhC; hypothetical protein 587914 ydhC 5463094 ydhC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420233.1 587228 D 326423 CDS YP_001420234.1 154685073 5463095 588056..589249 1 NC_009725.1 macrolide glycosyltransferase YdhE; hypothetical protein 589249 ydhE 5463095 ydhE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420234.1 588056 D 326423 CDS YP_001420235.1 154685074 5463096 complement(589307..589561) 1 NC_009725.1 hypothetical protein YjiA; hypothetical protein 589561 yjiA 5463096 yjiA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420235.1 589307 R 326423 CDS YP_001420236.1 154685075 5463097 589793..590062 1 NC_009725.1 hypothetical protein YdcS; hypothetical protein 590062 ydcS 5463097 ydcS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420236.1 589793 D 326423 CDS YP_001420237.1 154685076 5463098 590199..591557 1 NC_009725.1 penicillin-binding protein PbpE; PbpE 591557 pbpE 5463098 pbpE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 PbpE YP_001420237.1 590199 D 326423 CDS YP_001420238.1 154685077 5462311 591947..592633 1 NC_009725.1 hypothetical protein YdhK; hypothetical protein 592633 ydhK 5462311 ydhK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420238.1 591947 D 326423 CDS YP_001420239.1 154685078 5462312 complement(592598..593758) 1 NC_009725.1 conserved hypothetical protein YdhL; hypothetical protein 593758 ydhL 5462312 ydhL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420239.1 592598 R 326423 CDS YP_001420240.1 154685079 5462313 594089..594805 1 NC_009725.1 conserved hypothetical protein YdhQ; hypothetical protein 594805 ydhQ 5462313 ydhQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420240.1 594089 D 326423 CDS YP_001420241.1 154685080 5462314 594927..595613 1 NC_009725.1 GntR family transcriptional regulator 595613 5462314 RBAM_006180 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GntR family transcriptional regulator YP_001420241.1 594927 D 326423 CDS YP_001420242.1 154685081 5462315 595603..596817 1 NC_009725.1 conserved hypothetical protein YycB; hypothetical protein 596817 yycB 5462315 yycB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420242.1 595603 D 326423 CDS YP_001420243.1 154685082 5461213 complement(596877..597191) 1 NC_009725.1 conserved hypothetical protein YvdR; hypothetical protein 597191 yvdR 5461213 yvdR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420243.1 596877 R 326423 CDS YP_001420244.1 154685083 5461214 complement(597191..597520) 1 NC_009725.1 conserved hypothetical protein YvdS; hypothetical protein 597520 yvdS 5461214 yvdS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420244.1 597191 R 326423 CDS YP_001420245.1 154685084 5461215 complement(597593..598174) 1 NC_009725.1 transcription regulator (TetR/AcrR family) YvdT; hypothetical protein 598174 yvdT 5461215 yvdT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420245.1 597593 R 326423 CDS YP_001420246.1 154685085 5461216 complement(598290..599852) 1 NC_009725.1 aspartate-proton symporter YveA; hypothetical protein 599852 yveA 5461216 yveA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420246.1 598290 R 326423 CDS YP_001420247.1 154685086 5461217 complement(600089..600943) 1 NC_009725.1 manganese cataYdhU; hypothetical protein 600943 ydhU 5461217 ydhU Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420247.1 600089 R 326423 CDS YP_001420248.1 154685087 5461486 complement(601055..601522) 1 NC_009725.1 conserved hypothetical protein YndB; hypothetical protein 601522 yndB 5461486 yndB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420248.1 601055 R 326423 CDS YP_001420249.1 154685088 5461487 601650..602651 1 NC_009725.1 conserved hypothetical protein YhfP; hypothetical protein 602651 yhfP 5461487 yhfP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420249.1 601650 D 326423 CDS YP_001420250.1 154685089 5461488 603078..604496 1 NC_009725.1 sugar transporter YdjK; hypothetical protein 604496 ydjK 5461488 ydjK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420250.1 603078 D 326423 CDS YP_001420251.1 154685090 5462155 610242..611219 1 NC_009725.1 catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP; thiamine monophosphate kinase 611219 thiL 5462155 thiL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 thiamine monophosphate kinase YP_001420251.1 610242 D 326423 CDS YP_001420252.1 154685091 5462156 611235..611711 1 NC_009725.1 conserved hypothetical protein YdiB; hypothetical protein 611711 ydiB 5462156 ydiB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420252.1 611235 D 326423 CDS YP_001420253.1 154685092 5462157 611692..612381 1 NC_009725.1 glycoprotein endopeptidase homolog YdiC; hypothetical protein 612381 ydiC 5462157 ydiC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420253.1 611692 D 326423 CDS YP_001420254.1 154685093 5462158 612392..612847 1 NC_009725.1 ribosomal-protein-alanine N-acetyltransferase YdiD; hypothetical protein 612847 ydiD 5462158 ydiD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420254.1 612392 D 326423 CDS YP_001420255.1 154685094 5460597 612840..613880 1 NC_009725.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease 613880 gcp 5460597 gcp Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DNA-binding/iron metalloprotein/AP endonuclease YP_001420255.1 612840 D 326423 CDS YP_001420256.1 154685095 5460598 complement(614104..616032) 1 NC_009725.1 ABC transporter ATP-binding YdiF; hypothetical protein 616032 ydiF 5460598 ydiF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420256.1 614104 R 326423 CDS YP_001420257.1 154685096 5460599 616172..616684 1 NC_009725.1 MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC 616684 moaC 5460599 moaC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 molybdenum cofactor biosynthesis protein MoaC YP_001420257.1 616172 D 326423 CDS YP_001420258.1 154685097 5460600 616681..617328 1 NC_009725.1 modulates transcription in response to the NADH/NAD(+) redox state; redox-sensing transcriptional repressor Rex 617328 rex 5460600 rex Bacillus amyloliquefaciens subsp. plantarum str. FZB42 redox-sensing transcriptional repressor Rex YP_001420258.1 616681 D 326423 CDS YP_001420259.1 154685098 5460601 617347..617517 1 NC_009725.1 sec-independent protein translocase protein TatAy; TatAy 617517 tatAy 5460601 tatAy Bacillus amyloliquefaciens subsp. plantarum str. FZB42 TatAy YP_001420259.1 617347 D 326423 CDS YP_001420260.1 154685099 5460837 617533..618282 1 NC_009725.1 sec-independent protein translocase protein TatCy; TatCy 618282 tatCy 5460837 tatCy Bacillus amyloliquefaciens subsp. plantarum str. FZB42 TatCy YP_001420260.1 617533 D 326423 CDS YP_001420261.1 154685100 5460838 complement(618320..618511) 1 NC_009725.1 hypothetical lipoprotein YdiK; hypothetical protein 618511 ydiK 5460838 ydiK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420261.1 618320 R 326423 CDS YP_001420262.1 154685101 5460839 complement(618508..619242) 1 NC_009725.1 conserved hypothetical protein YdiL; hypothetical protein 619242 ydiL 5460839 ydiL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420262.1 618508 R 326423 CDS YP_001420263.1 154685102 5460840 619479..619763 1 NC_009725.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 619763 groES 5460840 groES Bacillus amyloliquefaciens subsp. plantarum str. FZB42 co-chaperonin GroES YP_001420263.1 619479 D 326423 CDS YP_001420264.1 154685103 5460841 619805..621439 1 NC_009725.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; molecular chaperone GroEL 621439 groEL 5460841 groEL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 molecular chaperone GroEL YP_001420264.1 619805 D 326423 CDS YP_001420265.1 154685104 5462934 621764..624049 1 NC_009725.1 conserved hypothetical protein YkuG; hypothetical protein 624049 ykuG 5462934 ykuG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420265.1 621764 D 326423 CDS YP_001420266.1 154685105 5462935 624134..624706 1 NC_009725.1 hypothetical protein YkuH; hypothetical protein 624706 ykuH 5462935 ykuH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420266.1 624134 D 326423 CDS YP_001420267.1 154685106 5462936 625066..625215 1 NC_009725.1 hypothetical protein 625215 5462936 RBAM_006510 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420267.1 625066 D 326423 CDS YP_001420268.1 154685107 5462937 625422..625811 1 NC_009725.1 hypothetical protein 625811 5462937 RBAM_006520 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420268.1 625422 D 326423 CDS YP_001420269.1 154685108 5462938 complement(626009..628486) 1 NC_009725.1 transcriptional regulator GutR; GutR 628486 gutR 5462938 gutR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GutR YP_001420269.1 626009 R 326423 CDS YP_001420270.1 154685109 5462203 628687..629748 1 NC_009725.1 sorbitol dehydrogenase (L-iditol 2-dehydrogenase) GutB; GutB 629748 gutB 5462203 gutB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GutB YP_001420270.1 628687 D 326423 CDS YP_001420271.1 154685110 5462204 629822..631198 1 NC_009725.1 probable glucitol transport protein GutA; GutA 631198 gutA 5462204 gutA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GutA YP_001420271.1 629822 D 326423 CDS YP_001420272.1 154685111 5462205 631300..632262 1 NC_009725.1 fructokinase homolog YdjE; hypothetical protein 632262 ydjE 5462205 ydjE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420272.1 631300 D 326423 CDS YP_001420273.1 154685112 5462206 632496..632813 1 NC_009725.1 hypothetical protein YjdJ; hypothetical protein 632813 yjdJ 5462206 yjdJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420273.1 632496 D 326423 CDS YP_001420274.1 154685113 5462207 632927..633613 1 NC_009725.1 phage shock protein A homolog like protein PspA; hypothetical protein 633613 pspA 5462207 pspA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420274.1 632927 D 326423 CDS YP_001420275.1 154685114 5463111 633664..634689 1 NC_009725.1 hypothetical protein YdjG; hypothetical protein 634689 ydjG 5463111 ydjG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420275.1 633664 D 326423 CDS YP_001420276.1 154685115 5463112 634689..635450 1 NC_009725.1 conserved hypothetical protein YdjH; hypothetical protein 635450 ydjH 5463112 ydjH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420276.1 634689 D 326423 CDS YP_001420277.1 154685116 5463113 635477..636481 1 NC_009725.1 conserved hypothetical protein YdjI; hypothetical protein 636481 ydjI 5463113 ydjI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420277.1 635477 D 326423 CDS YP_001420278.1 154685117 5463114 complement(636523..638454) 1 NC_009725.1 acetyltransferase YrhL; hypothetical protein 638454 yrhL 5463114 yrhL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420278.1 636523 R 326423 CDS YP_001420279.1 154685118 5463115 complement(638726..639586) 1 NC_009725.1 anti-sigV factor YrhM; hypothetical protein 639586 yrhM 5463115 yrhM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420279.1 638726 R 326423 CDS YP_001420280.1 154685119 5461999 complement(639586..640083) 1 NC_009725.1 RNA polymerase ECF(extracytoplasmic function)-type sigma factor SigV; SigV 640083 sigV 5461999 sigV Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SigV YP_001420280.1 639586 R 326423 CDS YP_001420281.1 154685120 5462000 complement(640272..641312) 1 NC_009725.1 dehydrogenase YdjL; hypothetical protein 641312 ydjL 5462000 ydjL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420281.1 640272 R 326423 CDS YP_001420282.1 154685121 5462001 641676..642044 1 NC_009725.1 hypothetical protein YdjM; hypothetical protein 642044 ydjM 5462001 ydjM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420282.1 641676 D 326423 CDS YP_001420283.1 154685122 5462002 642110..643156 1 NC_009725.1 hypothetical protein YdjN; hypothetical protein 643156 ydjN 5462002 ydjN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420283.1 642110 D 326423 CDS YP_001420284.1 154685123 5462003 complement(643187..643345) 1 NC_009725.1 hypothetical protein 643345 5462003 RBAM_006680 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420284.1 643187 R 326423 CDS YP_001420285.1 154685124 5462649 complement(643444..643653) 1 NC_009725.1 hypothetical protein YdjO; hypothetical protein 643653 ydjO 5462649 ydjO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420285.1 643444 R 326423 CDS YP_001420286.1 154685125 5462650 complement(643858..645396) 1 NC_009725.1 spore coat protein (outer) CotA; CotA 645396 cotA 5462650 cotA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 CotA YP_001420286.1 643858 R 326423 CDS YP_001420287.1 154685126 5462651 complement(645504..646889) 1 NC_009725.1 gamma-aminobutyrate (GABA) permease GabP; GabP 646889 gabP 5462651 gabP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GabP YP_001420287.1 645504 R 326423 CDS YP_001420288.1 154685127 5462652 647276..648148 1 NC_009725.1 transport protein YeaB; hypothetical protein 648148 yeaB 5462652 yeaB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420288.1 647276 D 326423 CDS YP_001420289.1 154685128 5462653 648287..649249 1 NC_009725.1 conserved hypothetical protein YeaC; hypothetical protein 649249 yeaC 5462653 yeaC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420289.1 648287 D 326423 CDS YP_001420290.1 154685129 5461111 649249..650433 1 NC_009725.1 conserved hypothetical protein YeaD; hypothetical protein 650433 yeaD 5461111 yeaD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420290.1 649249 D 326423 CDS YP_001420291.1 154685130 5461112 650452..652659 1 NC_009725.1 conserved hypothetical protein YebA; hypothetical protein 652659 yebA 5461112 yebA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420291.1 650452 D 326423 CDS YP_001420292.1 154685131 5461113 652823..654364 1 NC_009725.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 654364 guaA 5461113 guaA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GMP synthase YP_001420292.1 652823 D 326423 CDS YP_001420293.1 154685132 5461114 654466..654999 1 NC_009725.1 sigma factor 654999 5461114 RBAM_006770 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 sigma factor YP_001420293.1 654466 D 326423 CDS YP_001420294.1 154685133 5461115 654981..656420 1 NC_009725.1 hypothetical protein 656420 5461115 RBAM_006780 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420294.1 654981 D 326423 CDS YP_001420295.1 154685134 5460997 656777..658099 1 NC_009725.1 hypoxanthine/guanine permease PbuG; PbuG 658099 pbuG 5460997 pbuG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 PbuG YP_001420295.1 656777 D 326423 CDS YP_001420296.1 154685135 5460998 658297..659079 1 NC_009725.1 hypothetical protein YebC; YebC 659079 yebC 5460998 yebC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 YebC YP_001420296.1 658297 D 326423 CDS YP_001420297.1 154685136 5460999 659218..659391 1 NC_009725.1 hypothetical protein YebD; hypothetical protein 659391 yebD 5460999 yebD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420297.1 659218 D 326423 CDS YP_001420298.1 154685137 5461000 659513..660067 1 NC_009725.1 hypothetical protein YebE; hypothetical protein 660067 yebE 5461000 yebE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420298.1 659513 D 326423 CDS YP_001420299.1 154685138 5461001 660064..660261 1 NC_009725.1 hypothetical protein YebG; hypothetical protein 660261 yebG 5461001 yebG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420299.1 660064 D 326423 CDS YP_001420300.1 154685139 5461058 660574..661062 1 NC_009725.1 phosphoribosylaminoimidazole carboxylase PurE; hypothetical protein 661062 purE 5461058 purE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420300.1 660574 D 326423 CDS YP_001420301.1 154685140 5461059 661016..662197 1 NC_009725.1 With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit 662197 purK 5461059 purK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 phosphoribosylaminoimidazole carboxylase ATPase subunit YP_001420301.1 661016 D 326423 CDS YP_001420302.1 154685141 5461060 662197..663489 1 NC_009725.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 663489 purB 5461060 purB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 adenylosuccinate lyase YP_001420302.1 662197 D 326423 CDS YP_001420303.1 154685142 5461061 663565..664284 1 NC_009725.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 664284 purC 5461061 purC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 phosphoribosylaminoimidazole-succinocarboxamide synthase YP_001420303.1 663565 D 326423 CDS YP_001420304.1 154685143 5461062 664284..664538 1 NC_009725.1 With PurL and PurQ catalyzes the conversion of formylglycinamide ribonucleotide, ATP, and glutamine to formylglycinamidine ribonucleotide, ADP, and glutamate in the fourth step of the purine biosynthetic pathway; phosphoribosylformylglycinamidine synthase subunit PurS 664538 purS 5461062 purS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 phosphoribosylformylglycinamidine synthase subunit PurS YP_001420304.1 664284 D 326423 CDS YP_001420305.1 154685144 5460992 664535..665218 1 NC_009725.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase I 665218 purQ 5460992 purQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 phosphoribosylformylglycinamidine synthase I YP_001420305.1 664535 D 326423 CDS YP_001420306.1 154685145 5460993 665202..667430 1 NC_009725.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase II 667430 purL 5460993 purL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 phosphoribosylformylglycinamidine synthase II YP_001420306.1 665202 D 326423 CDS YP_001420307.1 154685146 5460994 667406..668836 1 NC_009725.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 668836 purF 5460994 purF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 amidophosphoribosyltransferase YP_001420307.1 667406 D 326423 CDS YP_001420308.1 154685147 5460995 668927..669967 1 NC_009725.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 669967 purM 5460995 purM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 phosphoribosylaminoimidazole synthetase YP_001420308.1 668927 D 326423 CDS YP_001420309.1 154685148 5460996 669964..670551 1 NC_009725.1 glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate; phosphoribosylglycinamide formyltransferase 670551 purN 5460996 purN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 phosphoribosylglycinamide formyltransferase YP_001420309.1 669964 D 326423 CDS YP_001420310.1 154685149 5462614 670548..672086 1 NC_009725.1 involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 672086 purH 5462614 purH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_001420310.1 670548 D 326423 CDS YP_001420311.1 154685150 5462615 672102..673370 1 NC_009725.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 673370 purD 5462615 purD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 phosphoribosylamine--glycine ligase YP_001420311.1 672102 D 326423 CDS YP_001420312.1 154685151 5462616 673892..675634 1 NC_009725.1 adenine deaminase YerA; hypothetical protein 675634 yerA 5462616 yerA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420312.1 673892 D 326423 CDS YP_001420313.1 154685152 5462617 675659..676654 1 NC_009725.1 hypothetical protein YerB; hypothetical protein 676654 yerB 5462617 yerB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420313.1 675659 D 326423 CDS YP_001420314.1 154685153 5462618 676657..676968 1 NC_009725.1 conserved hypothetical protein YerC; hypothetical protein 676968 yerC 5462618 yerC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420314.1 676657 D 326423 CDS YP_001420315.1 154685154 5461224 complement(677004..678578) 1 NC_009725.1 glutamate synthase YerD; hypothetical protein 678578 yerD 5461224 yerD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420315.1 677004 R 326423 CDS YP_001420316.1 154685155 5461225 678774..679463 1 NC_009725.1 PcrB-like protein; GGGP synthase; member of prenyltransferases that transfer isoprenoid groups to nonisoprenoid acceptors; functions in form GGGP from glycerol-1-phosphate (G-1-P) and geranylgeranyl pyrophosphate (GGPP); important in lipid metabolism and especially important as the ether linkages in archaea are different than those in bacteria; GGGP synthase lies at the branch point for membrane lipid biosynthesis; cytosolic; T acidophilum protein acts as a homodimer while M thermoautotrophicum protein has been reported to function as a pentamer; geranylgeranylglyceryl phosphate synthase-like protein 679463 pcrB 5461225 pcrB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 geranylgeranylglyceryl phosphate synthase-like protein YP_001420316.1 678774 D 326423 CDS YP_001420317.1 154685156 5461226 679521..681740 1 NC_009725.1 ATP-dependent DNA helicase PcrA; PcrA 681740 pcrA 5461226 pcrA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 PcrA YP_001420317.1 679521 D 326423 CDS YP_001420318.1 154685157 5461227 681762..683771 1 NC_009725.1 this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; NAD-dependent DNA ligase LigA 683771 ligA 5461227 ligA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 NAD-dependent DNA ligase LigA YP_001420318.1 681762 D 326423 CDS YP_001420319.1 154685158 5461228 683787..684983 1 NC_009725.1 hypothetical protein YerH; hypothetical protein 684983 yerH 5461228 yerH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420319.1 683787 D 326423 CDS YP_001420320.1 154685159 5463062 685221..686216 1 NC_009725.1 conserved hypothetical protein YerI; hypothetical protein 686216 yerI 5463062 yerI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420320.1 685221 D 326423 CDS YP_001420321.1 154685160 5463063 complement(686254..686946) 1 NC_009725.1 hypothetical protein SapB; hypothetical protein 686946 sapB 5463063 sapB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420321.1 686254 R 326423 CDS YP_001420322.1 154685161 5463064 complement(687067..688545) 1 NC_009725.1 proline transporter OpuE; OpuE 688545 opuE 5463064 opuE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 OpuE YP_001420322.1 687067 R 326423 CDS YP_001420323.1 154685162 5463065 688967..689257 1 NC_009725.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C 689257 gatC 5463065 gatC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 aspartyl/glutamyl-tRNA amidotransferase subunit C YP_001420323.1 688967 D 326423 CDS YP_001420324.1 154685163 5463066 689272..690729 1 NC_009725.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 690729 gatA 5463066 gatA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 aspartyl/glutamyl-tRNA amidotransferase subunit A YP_001420324.1 689272 D 326423 CDS YP_001420325.1 154685164 5461698 690743..692173 1 NC_009725.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 692173 gatB 5461698 gatB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 aspartyl/glutamyl-tRNA amidotransferase subunit B YP_001420325.1 690743 D 326423 CDS YP_001420326.1 154685165 5461699 complement(692237..693085) 1 NC_009725.1 transcription regulator (tetr/acrr family) YerO; hypothetical protein 693085 yerO 5461699 yerO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420326.1 692237 R 326423 CDS YP_001420327.1 154685166 5461700 693214..696357 1 NC_009725.1 multidrug efflux pump; self resistance against surfactin; essential for swarming motility; SwrC 696357 swrC 5461700 swrC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SwrC YP_001420327.1 693214 D 326423 CDS YP_001420328.1 154685167 5461701 696509..697420 1 NC_009725.1 similar to YegS from E. coli; lipid kinase 697420 yerQ 5461701 yerQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 lipid kinase YP_001420328.1 696509 D 326423 CDS YP_001420329.1 154685168 5461702 697568..698962 1 NC_009725.1 RNA methyltransferase YefA; hypothetical protein 698962 yefA 5461702 yefA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420329.1 697568 D 326423 CDS YP_001420330.1 154685169 5463265 699448..701019 1 NC_009725.1 type I restriction-modification system methyltransferase subunit like protein 701019 5463265 RBAM_007140 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 type I restriction-modification system methyltransferase subunit like protein YP_001420330.1 699448 D 326423 CDS YP_001420331.1 154685170 5463266 701003..702229 1 NC_009725.1 hypothetical protein 702229 5463266 RBAM_007150 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420331.1 701003 D 326423 CDS YP_001420332.1 154685171 5463267 702216..705368 1 NC_009725.1 hypothetical protein 705368 5463267 RBAM_007160 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420332.1 702216 D 326423 CDS YP_001420333.1 154685172 5463268 705514..706533 1 NC_009725.1 hypothetical protein 706533 5463268 RBAM_007170 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420333.1 705514 D 326423 CDS YP_001420334.1 154685173 5463269 706724..707890 1 NC_009725.1 hypothetical protein 707890 5463269 RBAM_007180 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420334.1 706724 D 326423 CDS YP_001420335.1 154685174 5462367 complement(708515..709018) 1 NC_009725.1 hypothetical protein 709018 5462367 RBAM_007190 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420335.1 708515 R 326423 CDS YP_001420336.1 154685175 5462368 complement(709038..709493) 1 NC_009725.1 hypothetical protein YeeF2; hypothetical protein 709493 yeeF2 5462368 yeeF2 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420336.1 709038 R 326423 CDS YP_001420337.1 154685176 5462369 complement(709577..710047) 1 NC_009725.1 hypothetical protein 710047 5462369 RBAM_007210 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420337.1 709577 R 326423 CDS YP_001420338.1 154685177 5462370 complement(710052..712055) 1 NC_009725.1 hypothetical protein YeeF1; hypothetical protein 712055 yeeF1 5462370 yeeF1 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420338.1 710052 R 326423 CDS YP_001420339.1 154685178 5462371 712354..713073 1 NC_009725.1 conserved hypothetical protein YeeI; hypothetical protein 713073 yeeI 5462371 yeeI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420339.1 712354 D 326423 CDS YP_001420340.1 154685179 5462113 713699..713947 1 NC_009725.1 spore coat peptide assembly protein CotJA; CotJA 713947 cotJA 5462113 cotJA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 CotJA YP_001420340.1 713699 D 326423 CDS YP_001420341.1 154685180 5462114 713931..714194 1 NC_009725.1 spore coat peptide assembly protein CotJB; CotJB 714194 cotJB 5462114 cotJB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 CotJB YP_001420341.1 713931 D 326423 CDS YP_001420342.1 154685181 5462115 714209..714778 1 NC_009725.1 spore coat peptide assembly protein CotJC; CotJC 714778 cotJC 5462115 cotJC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 CotJC YP_001420342.1 714209 D 326423 CDS YP_001420343.1 154685182 5462116 714867..715400 1 NC_009725.1 conserved hypothetical protein YesJ; hypothetical protein 715400 yesJ 5462116 yesJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420343.1 714867 D 326423 CDS YP_001420344.1 154685183 5462117 715429..715707 1 NC_009725.1 hypothetical protein 715707 5462117 RBAM_007280 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420344.1 715429 D 326423 CDS YP_001420345.1 154685184 5459510 715821..716510 1 NC_009725.1 conserved hypothetical protein YetF; hypothetical protein 716510 yetF 5459510 yetF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420345.1 715821 D 326423 CDS YP_001420346.1 154685185 5459511 complement(716543..716884) 1 NC_009725.1 conserved hypothetical protein YetG; hypothetical protein 716884 yetG 5459511 yetG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420346.1 716543 R 326423 CDS YP_001420347.1 154685186 5459512 complement(716954..717319) 1 NC_009725.1 conserved hypothetical protein YetH; hypothetical protein 717319 yetH 5459512 yetH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420347.1 716954 R 326423 CDS YP_001420348.1 154685187 5459513 717460..718344 1 NC_009725.1 conserved hypothetical protein YetI; hypothetical protein 718344 yetI 5459513 yetI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420348.1 717460 D 326423 CDS YP_001420349.1 154685188 5459514 718658..718831 1 NC_009725.1 hypothetical protein YezD; hypothetical protein 718831 yezD 5459514 yezD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420349.1 718658 D 326423 CDS YP_001420350.1 154685189 5459995 718861..719163 1 NC_009725.1 hypothetical protein 719163 5459995 RBAM_007340 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420350.1 718861 D 326423 CDS YP_001420351.1 154685190 5459996 719255..719899 1 NC_009725.1 conserved hypothetical protein YetJ; hypothetical protein 719899 yetJ 5459996 yetJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420351.1 719255 D 326423 CDS YP_001420352.1 154685191 5459997 complement(719938..720450) 1 NC_009725.1 transcription regulator MarR family homolog YetL; hypothetical protein 720450 yetL 5459997 yetL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420352.1 719938 R 326423 CDS YP_001420353.1 154685192 5459998 720613..721722 1 NC_009725.1 salicylate 1-monooxygenase YetM; hypothetical protein 721722 yetM 5459998 yetM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420353.1 720613 D 326423 CDS YP_001420354.1 154685193 5459999 complement(721759..722829) 1 NC_009725.1 hypothetical protein YetN; hypothetical protein 722829 yetN 5459999 yetN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420354.1 721759 R 326423 CDS YP_001420355.1 154685194 5460287 722994..726176 1 NC_009725.1 cytochrome P450/NADPH-cytochrome P450 reductase YetO; hypothetical protein 726176 yetO 5460287 yetO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420355.1 722994 D 326423 CDS YP_001420356.1 154685195 5460288 726469..727062 1 NC_009725.1 hypothetical protein 727062 5460288 RBAM_007400 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420356.1 726469 D 326423 CDS YP_001420357.1 154685196 5460289 727055..727366 1 NC_009725.1 hypothetical protein 727366 5460289 RBAM_007410 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420357.1 727055 D 326423 CDS YP_001420358.1 154685197 5460290 727367..728257 1 NC_009725.1 ABC transporter ATP-binding protein 728257 5460290 RBAM_007420 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ABC transporter ATP-binding protein YP_001420358.1 727367 D 326423 CDS YP_001420359.1 154685198 5460291 728272..729012 1 NC_009725.1 ABC transporter permease 729012 5460291 RBAM_007430 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ABC transporter permease YP_001420359.1 728272 D 326423 CDS YP_001420360.1 154685199 5460257 729067..729789 1 NC_009725.1 hypothetical protein 729789 5460257 RBAM_007440 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420360.1 729067 D 326423 CDS YP_001420361.1 154685200 5460258 730955..731659 1 NC_009725.1 hypothetical protein 731659 5460258 RBAM_007450 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420361.1 730955 D 326423 CDS YP_001420362.1 154685201 5460259 731672..732664 1 NC_009725.1 hypothetical protein 732664 5460259 RBAM_007460 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420362.1 731672 D 326423 CDS YP_001420363.1 154685202 5460260 732670..734013 1 NC_009725.1 hypothetical protein 734013 5460260 RBAM_007470 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420363.1 732670 D 326423 CDS YP_001420364.1 154685203 5460261 734040..734849 1 NC_009725.1 hypothetical protein 734849 5460261 RBAM_007480 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420364.1 734040 D 326423 CDS YP_001420365.1 154685204 5461565 734894..735523 1 NC_009725.1 hypothetical protein 735523 5461565 RBAM_007490 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420365.1 734894 D 326423 CDS YP_001420366.1 154685205 5461566 735548..736360 1 NC_009725.1 hypothetical protein 736360 5461566 RBAM_007500 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420366.1 735548 D 326423 CDS YP_001420367.1 154685206 5461567 736816..738744 1 NC_009725.1 phosphoglycerol transferase YfnI; hypothetical protein 738744 yfnI 5461567 yfnI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420367.1 736816 D 326423 CDS YP_001420368.1 154685207 5461568 738960..739724 1 NC_009725.1 glucose-1-phosphate cytidylyltransferase YfnH; hypothetical protein 739724 yfnH 5461568 yfnH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420368.1 738960 D 326423 CDS YP_001420369.1 154685208 5461569 739731..740699 1 NC_009725.1 CDR-glucose 4,6-dehydratase YfnG; hypothetical protein 740699 yfnG 5461569 yfnG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420369.1 739731 D 326423 CDS YP_001420370.1 154685209 5460957 740724..741635 1 NC_009725.1 hypothetical protein YfnF; hypothetical protein 741635 yfnF 5460957 yfnF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420370.1 740724 D 326423 CDS YP_001420371.1 154685210 5460958 741664..742824 1 NC_009725.1 hypothetical protein YfnE; hypothetical protein 742824 yfnE 5460958 yfnE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420371.1 741664 D 326423 CDS YP_001420372.1 154685211 5460959 742840..743778 1 NC_009725.1 hypothetical protein YfnD; hypothetical protein 743778 yfnD 5460959 yfnD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420372.1 742840 D 326423 CDS YP_001420373.1 154685212 5460960 complement(743808..745037) 1 NC_009725.1 fosfidomycin resistance protein YfnC; hypothetical protein 745037 yfnC 5460960 yfnC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420373.1 743808 R 326423 CDS YP_001420374.1 154685213 5460961 complement(745155..746540) 1 NC_009725.1 metabolite transporter YfnA; hypothetical protein 746540 yfnA 5460961 yfnA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420374.1 745155 R 326423 CDS YP_001420375.1 154685214 5460962 746785..748242 1 NC_009725.1 benzaldehyde dehydrogenase YfmT; hypothetical protein 748242 yfmT 5460962 yfmT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420375.1 746785 D 326423 CDS YP_001420376.1 154685215 5462392 748258..749112 1 NC_009725.1 methyl-accepting chemotaxis protein YfmS; hypothetical protein 749112 yfmS 5462392 yfmS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420376.1 748258 D 326423 CDS YP_001420377.1 154685216 5462393 749241..750140 1 NC_009725.1 dehydrogenase YhxD; hypothetical protein 750140 yhxD 5462393 yhxD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420377.1 749241 D 326423 CDS YP_001420378.1 154685217 5462394 complement(750187..751254) 1 NC_009725.1 beta 1,4 glucosyltransferase 751254 5462394 RBAM_007620 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 beta 1,4 glucosyltransferase YP_001420378.1 750187 R 326423 CDS YP_001420379.1 154685218 5462395 751413..753302 1 NC_009725.1 ABC transporter (ATP-binding protein) YfmR; hypothetical protein 753302 yfmR 5462395 yfmR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420379.1 751413 D 326423 CDS YP_001420380.1 154685219 5462396 753494..753916 1 NC_009725.1 transcription regulator MerR family YfmP; hypothetical protein 753916 yfmP 5462396 yfmP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420380.1 753494 D 326423 CDS YP_001420381.1 154685220 5462397 753980..755164 1 NC_009725.1 multidrug-efflux transporter YfmO; hypothetical protein 755164 yfmO 5462397 yfmO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420381.1 753980 D 326423 CDS YP_001420382.1 154685221 5460644 complement(755208..756764) 1 NC_009725.1 ABC transporter (ATP-binding protein) YfmM; hypothetical protein 756764 yfmM 5460644 yfmM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420382.1 755208 R 326423 CDS YP_001420383.1 154685222 5460645 756935..758065 1 NC_009725.1 RNA helicase Yfml; hypothetical protein 758065 yfml 5460645 yfml Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420383.1 756935 D 326423 CDS YP_001420384.1 154685223 5460647 complement(758637..759656) 1 NC_009725.1 NADP-dependent oxidoreductase YfmJ; hypothetical protein 759656 yfmJ 5460647 yfmJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420384.1 758637 R 326423 CDS YP_001420385.1 154685224 5460648 complement(759785..760135) 1 NC_009725.1 hypothetical protein YfmB; hypothetical protein 760135 yfmB 5460648 yfmB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420385.1 759785 R 326423 CDS YP_001420386.1 154685225 5463180 760326..760673 1 NC_009725.1 general stress protein 17M (GSP17M) YflT; hypothetical protein 760673 yflT 5463180 yflT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420386.1 760326 D 326423 CDS YP_001420387.1 154685226 5463181 760837..762102 1 NC_009725.1 COG3866; pectate lyase; Pel 762102 pel 5463181 pel Bacillus amyloliquefaciens subsp. plantarum str. FZB42 Pel YP_001420387.1 760837 D 326423 CDS YP_001420388.1 154685227 5463182 762227..763663 1 NC_009725.1 2-oxoglutarate/malate translocator YflS; hypothetical protein 763663 yflS 5463182 yflS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420388.1 762227 D 326423 CDS YP_001420389.1 154685228 5463183 763771..764457 1 NC_009725.1 hypothetical protein 764457 5463183 RBAM_007740 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420389.1 763771 D 326423 CDS YP_001420390.1 154685229 5463184 764571..766568 1 NC_009725.1 proposed to be involved in surface adhesion; GXT repeat-containing collagen-like protein 766568 5463184 RBAM_007750 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GXT repeat-containing collagen-like protein YP_001420390.1 764571 D 326423 CDS YP_001420391.1 154685230 5463185 766695..767945 1 NC_009725.1 pfam02018; carbohydrate binding domain; proposed to be involved in surface adhesion; GXT repeat-containing collagen-like protein 767945 5463185 RBAM_007760 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GXT repeat-containing collagen-like protein YP_001420391.1 766695 D 326423 CDS YP_001420392.1 154685231 5462342 768125..769504 1 NC_009725.1 collagen like triple helix with GXT repeats; proposed to be involved in surface adhesion; hypothetical protein 769504 5462342 RBAM_007770 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420392.1 768125 D 326423 CDS YP_001420393.1 154685232 5462343 769687..771291 1 NC_009725.1 two component sensor histidine kinase; COG3290, CitA like family regulating citrate/malate metabolism by response to the environmental Mg-citrate complex; CitS 771291 citS 5462343 citS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 CitS YP_001420393.1 769687 D 326423 CDS YP_001420394.1 154685233 5462344 771288..771968 1 NC_009725.1 two component response regulator; COG4565, response to the environmental Mg-citrate complex; regulation of citrate/malate metabolism; hypothetical protein 771968 citT 5462344 citT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420394.1 771288 D 326423 CDS YP_001420395.1 154685234 5462345 771981..772943 1 NC_009725.1 conserved hypothetical protein YflP; hypothetical protein 772943 yflP 5462345 yflP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420395.1 771981 D 326423 CDS YP_001420396.1 154685235 5462346 773136..774434 1 NC_009725.1 magnesium citrate secondary transporter CitM; CitM 774434 citM 5462346 citM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 CitM YP_001420396.1 773136 D 326423 CDS YP_001420397.1 154685236 5462347 774486..775280 1 NC_009725.1 hypothetical protein YflN; hypothetical protein 775280 yflN 5462347 yflN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420397.1 774486 D 326423 CDS YP_001420398.1 154685237 5462797 775404..776495 1 NC_009725.1 nitric oxide synthase oxygenase YflM; hypothetical protein 776495 yflM 5462797 yflM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420398.1 775404 D 326423 CDS YP_001420399.1 154685238 5462798 complement(776489..776761) 1 NC_009725.1 catalyzes the hydrolysis of acylphosphate; acylphosphatase 776761 yflL 5462798 yflL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 acylphosphatase YP_001420399.1 776489 R 326423 CDS YP_001420400.1 154685239 5462799 776829..777488 1 NC_009725.1 conserved hypothetical protein YflK; hypothetical protein 777488 yflK 5462799 yflK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420400.1 776829 D 326423 CDS YP_001420401.1 154685240 5462800 complement(777528..777662) 1 NC_009725.1 hypothetical protein YflJ; hypothetical protein 777662 yflJ 5462800 yflJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420401.1 777528 R 326423 CDS YP_001420402.1 154685241 5462801 complement(777841..777996) 1 NC_009725.1 hypothetical protein YflI; hypothetical protein 777996 yflI 5462801 yflI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420402.1 777841 R 326423 CDS YP_001420403.1 154685242 5462802 complement(778079..778390) 1 NC_009725.1 hypothetical protein YflH; hypothetical protein 778390 yflH 5462802 yflH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420403.1 778079 R 326423 CDS YP_001420404.1 154685243 5460219 complement(778447..779196) 1 NC_009725.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mnin Bacillus subtilis the protein in this cluster is considered non-essential; methionine aminopeptidase 779196 yflG 5460219 yflG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 methionine aminopeptidase YP_001420404.1 778447 R 326423 CDS YP_001420405.1 154685244 5460220 779361..780743 1 NC_009725.1 phosphotransferase system (PTS) N-acetylglucosamine-specific enzymeIICB component NagP; NagP 780743 nagP 5460220 nagP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 NagP YP_001420405.1 779361 D 326423 CDS YP_001420406.1 154685245 5460221 780870..781313 1 NC_009725.1 hypothetical protein YfmQ; hypothetical protein 781313 yfmQ 5460221 yfmQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420406.1 780870 D 326423 CDS YP_001420407.1 154685246 5460222 complement(781354..783291) 1 NC_009725.1 conserved hypothetical protein; repressed by root exudate; hypothetical protein 783291 yflE 5460222 yflE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420407.1 781354 R 326423 CDS YP_001420408.1 154685247 5460223 783537..783914 1 NC_009725.1 hypothetical protein YflB; hypothetical protein 783914 yflB 5460223 yflB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420408.1 783537 D 326423 CDS YP_001420409.1 154685248 5460224 complement(783924..784355) 1 NC_009725.1 spore coat protein CotP; CotP 784355 cotP 5460224 cotP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 CotP YP_001420409.1 783924 R 326423 CDS YP_001420410.1 154685249 5462922 complement(784371..784613) 1 NC_009725.1 hypothetical protein YdgA; hypothetical protein 784613 ydgA 5462922 ydgA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420410.1 784371 R 326423 CDS YP_001420411.1 154685250 5462923 complement(784628..784888) 1 NC_009725.1 hypothetical protein YdgB; hypothetical protein 784888 ydgB 5462923 ydgB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420411.1 784628 R 326423 CDS YP_001420412.1 154685251 5462924 785159..786574 1 NC_009725.1 phosphotransferase system (PTS) trehalose-specific enzyme IIBC component TreP; TreP 786574 treP 5462924 treP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 TreP YP_001420412.1 785159 D 326423 CDS YP_001420413.1 154685252 5462925 786650..788335 1 NC_009725.1 trehalose-6-phosphate hydrolase TreA; TreA 788335 treA 5462925 treA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 TreA YP_001420413.1 786650 D 326423 CDS YP_001420414.1 154685253 5462926 788357..789073 1 NC_009725.1 trehalose operon transcriptional repressor TreR; TreR 789073 treR 5462926 treR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 TreR YP_001420414.1 788357 D 326423 CDS YP_001420415.1 154685254 5462927 789206..789871 1 NC_009725.1 NAD(P)H nitroreductase YfkO; hypothetical protein 789871 yfkO 5462927 yfkO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420415.1 789206 D 326423 CDS YP_001420416.1 154685255 5461105 complement(789907..790668) 1 NC_009725.1 hypothetical protein 790668 5461105 RBAM_008010 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420416.1 789907 R 326423 CDS YP_001420417.1 154685256 5461106 complement(790665..791804) 1 NC_009725.1 hypothetical protein 791804 5461106 RBAM_008020 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420417.1 790665 R 326423 CDS YP_001420418.1 154685257 5461107 complement(792014..796306) 1 NC_009725.1 in Escherichia coli this is a periplasmic enzyme while in gram positive organisms it may be anchored at the cell surface; this protein appears to consist of a dimer fusion; functions during ribonucleic acid degradation; 2',3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate; bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein 796306 yfkN 5461107 yfkN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein YP_001420418.1 792014 R 326423 CDS YP_001420419.1 154685258 5461108 796527..797042 1 NC_009725.1 conserved hypothetical protein YfkM; hypothetical protein 797042 yfkM 5461108 yfkM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420419.1 796527 D 326423 CDS YP_001420420.1 154685259 5461109 complement(797063..798094) 1 NC_009725.1 transcriptional regulator 798094 5461109 RBAM_008050 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 transcriptional regulator YP_001420420.1 797063 R 326423 CDS YP_001420421.1 154685260 5461110 complement(798231..798935) 1 NC_009725.1 shikimate dehydrogenase 798935 5461110 RBAM_008060 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 shikimate dehydrogenase YP_001420421.1 798231 R 326423 CDS YP_001420422.1 154685261 5462831 complement(799047..799958) 1 NC_009725.1 shikimate dehydrogenase 799958 5462831 RBAM_008070 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 shikimate dehydrogenase YP_001420422.1 799047 R 326423 CDS YP_001420423.1 154685262 5462832 complement(799997..800758) 1 NC_009725.1 catalyzes the dehydration of 3-dehydroquinate to form 3-dehydroshikimate in aromatic amino acid biosynthesis; 3-dehydroquinate dehydratase 800758 aroD 5462832 aroD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 3-dehydroquinate dehydratase YP_001420423.1 799997 R 326423 CDS YP_001420424.1 154685263 5462833 complement(800785..801978) 1 NC_009725.1 conserved hypothetical protein YfkL; hypothetical protein 801978 yfkL 5462833 yfkL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420424.1 800785 R 326423 CDS YP_001420425.1 154685264 5462834 complement(802315..802530) 1 NC_009725.1 hypothetical protein YfkK; hypothetical protein 802530 yfkK 5462834 yfkK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420425.1 802315 R 326423 CDS YP_001420426.1 154685265 5462835 802686..803159 1 NC_009725.1 protein-tyrosine phosphatase YfkJ; hypothetical protein 803159 yfkJ 5462835 yfkJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420426.1 802686 D 326423 CDS YP_001420427.1 154685266 5462836 803173..803499 1 NC_009725.1 conserved hypothetical protein YfkI; hypothetical protein 803499 yfkI 5462836 yfkI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420427.1 803173 D 326423 CDS YP_001420428.1 154685267 5461182 803511..804350 1 NC_009725.1 conserved hypothetical protein YfkH; hypothetical protein 804350 yfkH 5461182 yfkH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420428.1 803511 D 326423 CDS YP_001420429.1 154685268 5461183 complement(804536..805714) 1 NC_009725.1 hypothetical protein YfkF; hypothetical protein 805714 yfkF 5461183 yfkF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420429.1 804536 R 326423 CDS YP_001420430.1 154685269 5461184 805873..806928 1 NC_009725.1 H+/Ca2+ antiporter YfkE; hypothetical protein 806928 yfkE 5461184 yfkE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420430.1 805873 D 326423 CDS YP_001420431.1 154685270 5461185 807002..807793 1 NC_009725.1 hypothetical protein YfkD; hypothetical protein 807793 yfkD 5461185 yfkD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420431.1 807002 D 326423 CDS YP_001420432.1 154685271 5461186 complement(807822..808655) 1 NC_009725.1 conserved hypothetical protein YfkC; hypothetical protein 808655 yfkC 5461186 yfkC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420432.1 807822 R 326423 CDS YP_001420433.1 154685272 5461187 complement(808662..809783) 1 NC_009725.1 conserved hypothetical protein YfkA; hypothetical protein 809783 yfkA 5461187 yfkA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420433.1 808662 R 326423 CDS YP_001420434.1 154685273 5461570 809930..810115 1 NC_009725.1 hypothetical protein YfjT; hypothetical protein 810115 yfjT 5461570 yfjT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420434.1 809930 D 326423 CDS YP_001420435.1 154685274 5461571 810216..811007 1 NC_009725.1 polysaccharide deacetylase PdaA; PdaA 811007 pdaA 5461571 pdaA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 PdaA YP_001420435.1 810216 D 326423 CDS YP_001420436.1 154685275 5461572 complement(811042..811902) 1 NC_009725.1 hypothetical oxidoreductase YfjR; hypothetical protein 811902 yfjR 5461572 yfjR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420436.1 811042 R 326423 CDS YP_001420437.1 154685276 5461573 complement(811951..812598) 1 NC_009725.1 hypothetical protein 812598 5461573 RBAM_008220 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420437.1 811951 R 326423 CDS YP_001420438.1 154685277 5461574 complement(812662..813621) 1 NC_009725.1 divalent cation transport protein YfjQ; hypothetical protein 813621 yfjQ 5461574 yfjQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420438.1 812662 R 326423 CDS YP_001420439.1 154685278 5461575 813728..814591 1 NC_009725.1 DNA-3-methyladenine glycosidase II YfjP; hypothetical protein 814591 yfjP 5461575 yfjP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420439.1 813728 D 326423 CDS YP_001420440.1 154685279 5461703 814725..816125 1 NC_009725.1 RNA methyltransferase YfjO; hypothetical protein 816125 yfjO 5461703 yfjO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420440.1 814725 D 326423 CDS YP_001420441.1 154685280 5461704 complement(816122..816343) 1 NC_009725.1 hypothetical protein 816343 5461704 RBAM_008260 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420441.1 816122 R 326423 CDS YP_001420442.1 154685281 5461705 816905..817204 1 NC_009725.1 hypothetical protein 817204 5461705 RBAM_008270 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420442.1 816905 D 326423 CDS YP_001420443.1 154685282 5461706 818093..819076 1 NC_009725.1 conserved hypothetical protein YfjN; hypothetical protein 819076 yfjN 5461706 yfjN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420443.1 818093 D 326423 CDS YP_001420444.1 154685283 5461707 819234..819734 1 NC_009725.1 hypothetical protein YfjM; hypothetical protein 819734 yfjM 5461707 yfjM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420444.1 819234 D 326423 CDS YP_001420445.1 154685284 5461708 819990..820991 1 NC_009725.1 acetoin dehydrogenase E1 component (TPP-dependent alpha subunit) AcoA; hypothetical protein 820991 acoA 5461708 acoA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420445.1 819990 D 326423 CDS YP_001420446.1 154685285 5460712 820993..822021 1 NC_009725.1 acetoin dehydrogenase E1 component (TPP-dependent beta subunit) AcoB; hypothetical protein 822021 acoB 5460712 acoB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420446.1 820993 D 326423 CDS YP_001420447.1 154685286 5460713 822036..823229 1 NC_009725.1 acetoin dehydrogenase E2 component (dihydrolipoamide acetyltransferase) AcoC; branched-chain alpha-keto acid dehydrogenase subunit E2 823229 acoC 5460713 acoC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 branched-chain alpha-keto acid dehydrogenase subunit E2 YP_001420447.1 822036 D 326423 CDS YP_001420448.1 154685287 5460714 823244..824623 1 NC_009725.1 E3 component of acetoin cleaving system; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 824623 acoL 5460714 acoL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 dihydrolipoamide dehydrogenase YP_001420448.1 823244 D 326423 CDS YP_001420449.1 154685288 5460715 824730..826538 1 NC_009725.1 transcription activator of acetoin dehydrogenaseoperon AcoR; hypothetical protein 826538 acoR 5460715 acoR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420449.1 824730 D 326423 CDS YP_001420450.1 154685289 5460716 826604..826786 1 NC_009725.1 small, acid-soluble spore protein SspH; SspH 826786 sspH 5460716 sspH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SspH YP_001420450.1 826604 D 326423 CDS YP_001420451.1 154685290 5460717 826957..828306 1 NC_009725.1 maltose-6'-phosphate glucosid GlvA; GlvA 828306 glvA 5460717 glvA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GlvA YP_001420451.1 826957 D 326423 CDS YP_001420452.1 154685291 5461463 828375..829136 1 NC_009725.1 HTH-type transcriptional regulator GlvR; GlvR 829136 glvR 5461463 glvR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GlvR YP_001420452.1 828375 D 326423 CDS YP_001420453.1 154685292 5461464 829153..830739 1 NC_009725.1 phosphotransferase system (PTS) maltose-specificenzyme IICB component GlvC; GlvC 830739 glvC 5461464 glvC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GlvC YP_001420453.1 829153 D 326423 CDS YP_001420454.1 154685293 5461465 830927..833254 1 NC_009725.1 hypothetical protein 833254 5461465 RBAM_008390 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420454.1 830927 D 326423 CDS YP_001420455.1 154685294 5461466 833550..835283 1 NC_009725.1 ABC transporter (ATP binding protein) YfiB; hypothetical protein 835283 yfiB 5461466 yfiB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420455.1 833550 D 326423 CDS YP_001420456.1 154685295 5461467 835264..837081 1 NC_009725.1 hypothetical ABC transporter ATP-binding protein YfiC; hypothetical protein 837081 yfiC 5461467 yfiC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420456.1 835264 D 326423 CDS YP_001420457.1 154685296 5461468 837249..837653 1 NC_009725.1 conserved hypothetical protein YfiD; hypothetical protein 837653 yfiD 5461468 yfiD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420457.1 837249 D 326423 CDS YP_001420458.1 154685297 5461176 837670..838527 1 NC_009725.1 conserved hypothetical protein YfiE; hypothetical protein 838527 yfiE 5461176 yfiE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420458.1 837670 D 326423 CDS YP_001420459.1 154685298 5461177 838893..839840 1 NC_009725.1 protoheme IX farnesyltransferase CtaO; hypothetical protein 839840 ctaO 5461177 ctaO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420459.1 838893 D 326423 CDS YP_001420460.1 154685299 5461178 complement(839878..840429) 1 NC_009725.1 padC transcriptional repressor PadR; PadR 840429 padR 5461178 padR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 PadR YP_001420460.1 839878 R 326423 CDS YP_001420461.1 154685300 5461179 840662..841264 1 NC_009725.1 hypothetical protein 841264 5461179 RBAM_008460 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420461.1 840662 D 326423 CDS YP_001420462.1 154685301 5461180 841255..842343 1 NC_009725.1 surface adhesion protein; hypothetical protein 842343 yfiQ 5461180 yfiQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420462.1 841255 D 326423 CDS YP_001420463.1 154685302 5461181 842665..845076 1 NC_009725.1 hypothetical protein 845076 5461181 RBAM_008480 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420463.1 842665 D 326423 CDS YP_001420464.1 154685303 5461073 845099..845371 1 NC_009725.1 RNAse inhibitor 845371 5461073 RBAM_008490 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 RNAse inhibitor YP_001420464.1 845099 D 326423 CDS YP_001420465.1 154685304 5461074 845397..845939 1 NC_009725.1 hypothetical protein YfiT; metal-dependent hydrolase 845939 yfiT 5461074 yfiT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 metal-dependent hydrolase YP_001420465.1 845397 D 326423 CDS YP_001420466.1 154685305 5461075 complement(845899..847491) 1 NC_009725.1 multidrug-efflux transporter YfiU; hypothetical protein 847491 yfiU 5461075 yfiU Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420466.1 845899 R 326423 CDS YP_001420467.1 154685306 5461076 complement(847600..848082) 1 NC_009725.1 conserved hypothetical protein YfiV; hypothetical protein 848082 yfiV 5461076 yfiV Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420467.1 847600 R 326423 CDS YP_001420468.1 154685307 5461077 848251..850821 1 NC_009725.1 conserved hypothetical protein YfiX; hypothetical protein 850821 yfiX 5461077 yfiX Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420468.1 848251 D 326423 CDS YP_001420469.1 154685308 5461078 850916..851800 1 NC_009725.1 conserved hypothetical protein YfhB; hypothetical protein 851800 yfhB 5461078 yfhB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420469.1 850916 D 326423 CDS YP_001420470.1 154685309 5462625 851877..852461 1 NC_009725.1 conserved hypothetical protein YfhC; hypothetical protein 852461 yfhC 5462625 yfhC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420470.1 851877 D 326423 CDS YP_001420471.1 154685310 5462626 complement(852502..852693) 1 NC_009725.1 hypothetical protein YfhD; hypothetical protein 852693 yfhD 5462626 yfhD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420471.1 852502 R 326423 CDS YP_001420472.1 154685311 5462627 complement(852764..852874) 1 NC_009725.1 hypothetical protein YfhE; hypothetical protein 852874 yfhE 5462627 yfhE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420472.1 852764 R 326423 CDS YP_001420473.1 154685312 5462628 complement(852932..853831) 1 NC_009725.1 conserved hypothetical protein YfhF; hypothetical protein 853831 yfhF 5462628 yfhF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420473.1 852932 R 326423 CDS YP_001420474.1 154685313 5462629 853923..854714 1 NC_009725.1 binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities; recombination regulator RecX 854714 recX 5462629 recX Bacillus amyloliquefaciens subsp. plantarum str. FZB42 recombination regulator RecX YP_001420474.1 853923 D 326423 CDS YP_001420475.1 154685314 5462630 854721..855035 1 NC_009725.1 conserved hypothetical protein YfhH; hypothetical protein 855035 yfhH 5462630 yfhH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420475.1 854721 D 326423 CDS YP_001420476.1 154685315 5462619 855173..856372 1 NC_009725.1 conserved hypothetical protein YfhI; hypothetical protein 856372 yfhI 5462619 yfhI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420476.1 855173 D 326423 CDS YP_001420477.1 154685316 5462620 complement(856412..856801) 1 NC_009725.1 hypothetical protein YbfJ; hypothetical protein 856801 ybfJ 5462620 ybfJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420477.1 856412 R 326423 CDS YP_001420478.1 154685317 5462621 complement(856764..857675) 1 NC_009725.1 extracellular metalloprotease precursorMpr; Mpr 857675 mpr 5462621 mpr Bacillus amyloliquefaciens subsp. plantarum str. FZB42 Mpr YP_001420478.1 856764 R 326423 CDS YP_001420479.1 154685318 5462622 complement(857822..857974) 1 NC_009725.1 SASP K; found in the forespore compartment; acid-soluble spore protein K 857974 sspK 5462622 sspK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 acid-soluble spore protein K YP_001420479.1 857822 R 326423 CDS YP_001420480.1 154685319 5462623 858098..858367 1 NC_009725.1 hypothetical protein YfhJ; hypothetical protein 858367 yfhJ 5462623 yfhJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420480.1 858098 D 326423 CDS YP_001420481.1 154685320 5462624 858500..859027 1 NC_009725.1 conserved hypothetical protein YfhK; hypothetical protein 859027 yfhK 5462624 yfhK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420481.1 858500 D 326423 CDS YP_001420482.1 154685321 5460238 859113..859448 1 NC_009725.1 hypothetical protein YfhL; hypothetical protein 859448 yfhL 5460238 yfhL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420482.1 859113 D 326423 CDS YP_001420483.1 154685322 5460239 859441..860301 1 NC_009725.1 conserved hypothetical protein YfhM; hypothetical protein 860301 yfhM 5460239 yfhM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420483.1 859441 D 326423 CDS YP_001420484.1 154685323 5460240 860512..861492 1 NC_009725.1 glycosyl transferase CsbB; hypothetical protein 861492 csbB 5460240 csbB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420484.1 860512 D 326423 CDS YP_001420485.1 154685324 5460241 861529..864114 1 NC_009725.1 hypothetical protein FhO; FhO 864114 fhO 5460241 fhO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 FhO YP_001420485.1 861529 D 326423 CDS YP_001420486.1 154685325 5460242 complement(864111..865094) 1 NC_009725.1 conserved hypothetical protein YfhP; hypothetical protein 865094 yfhP 5460242 yfhP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420486.1 864111 R 326423 CDS YP_001420487.1 154685326 5460243 865320..866417 1 NC_009725.1 A/G-specific DNA glycosylase YfhQ; hypothetical protein 866417 yfhQ 5460243 yfhQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420487.1 865320 D 326423 CDS YP_001420488.1 154685327 5462786 complement(866424..866648) 1 NC_009725.1 hypothetical protein YfhS; hypothetical protein 866648 yfhS 5462786 yfhS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420488.1 866424 R 326423 CDS YP_001420489.1 154685328 5462787 866730..867482 1 NC_009725.1 Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-(acyl carrier protein) reductase 867482 fabL 5462787 fabL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 enoyl-(acyl carrier protein) reductase YP_001420489.1 866730 D 326423 CDS YP_001420490.1 154685329 5462788 867548..867718 1 NC_009725.1 small acid-soluble spore protein SspE; SspE 867718 sspE 5462788 sspE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SspE YP_001420490.1 867548 D 326423 CDS YP_001420491.1 154685330 5462789 867879..868145 1 NC_009725.1 hypothetical protein YgaB; hypothetical protein 868145 ygaB 5462789 ygaB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420491.1 867879 D 326423 CDS YP_001420492.1 154685331 5462790 868281..868811 1 NC_009725.1 conserved hypothetical protein YgaC; hypothetical protein 868811 ygaC 5462790 ygaC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420492.1 868281 D 326423 CDS YP_001420493.1 154685332 5462791 868894..870636 1 NC_009725.1 ABC transporter ATP-binding protein YgaD; hypothetical protein 870636 ygaD 5462791 ygaD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420493.1 868894 D 326423 CDS YP_001420494.1 154685333 5460385 complement(870716..871780) 1 NC_009725.1 conserved hypothetical protein YgaE; hypothetical protein 871780 ygaE 5460385 ygaE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420494.1 870716 R 326423 CDS YP_001420495.1 154685334 5460386 complement(871990..873279) 1 NC_009725.1 converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate; glutamate-1-semialdehyde aminotransferase 873279 gsaB 5460386 gsaB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 glutamate-1-semialdehyde aminotransferase YP_001420495.1 871990 R 326423 CDS YP_001420496.1 154685335 5460387 873437..873910 1 NC_009725.1 conserved hypothetical protein YgaF; hypothetical protein 873910 ygaF 5460387 ygaF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420496.1 873437 D 326423 CDS YP_001420497.1 154685336 5460388 874035..874472 1 NC_009725.1 repressor of peroxide stress regulon; Fur homolog;repressor of ahpCF, katA, zosA, mrgA; transcriptional activator of srfA gene expression; PerR 874472 perR 5460388 perR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 PerR YP_001420497.1 874035 D 326423 CDS YP_001420498.1 154685337 5460389 complement(874507..874860) 1 NC_009725.1 hypothetical protein YgzB; hypothetical protein 874860 ygzB 5460389 ygzB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420498.1 874507 R 326423 CDS YP_001420499.1 154685338 5460390 875063..875947 1 NC_009725.1 hypothetical protein YgxA; hypothetical protein 875947 ygxA 5460390 ygxA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420499.1 875063 D 326423 CDS YP_001420500.1 154685339 5460568 882892..884463 1 NC_009725.1 hypothetical protein 884463 5460568 RBAM_009040 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420500.1 882892 D 326423 CDS YP_001420501.1 154685340 5460569 884549..885247 1 NC_009725.1 conserved hypothetical protein YgaJ; hypothetical protein 885247 ygaJ 5460569 ygaJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420501.1 884549 D 326423 CDS YP_001420502.1 154685341 5460570 885529..887301 1 NC_009725.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 887301 thiC 5460570 thiC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 thiamine biosynthesis protein ThiC YP_001420502.1 885529 D 326423 CDS YP_001420503.1 154685342 5460571 complement(887342..888709) 1 NC_009725.1 conserved hypothetical protein YgaK; hypothetical protein 888709 ygaK 5460571 ygaK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420503.1 887342 R 326423 CDS YP_001420504.1 154685343 5460572 888957..889136 1 NC_009725.1 transcriptional regulatory protein SenN; SenN 889136 senN 5460572 senN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SenN YP_001420504.1 888957 D 326423 CDS YP_001420505.1 154685344 5460138 complement(889388..890833) 1 NC_009725.1 vegetative catalase KatA; KatA 890833 katA 5460138 katA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 KatA YP_001420505.1 889388 R 326423 CDS YP_001420506.1 154685345 5460139 891090..892025 1 NC_009725.1 hypothetical protein 892025 5460139 RBAM_009100 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420506.1 891090 D 326423 CDS YP_001420507.1 154685346 5460140 892206..893015 1 NC_009725.1 aliphatic sulfonates transport ATP-binding protein SsuB; SsuB 893015 ssuB 5460140 ssuB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SsuB YP_001420507.1 892206 D 326423 CDS YP_001420508.1 154685347 5460141 893031..894020 1 NC_009725.1 aliphatic sulfonates binding protein precursor SsuA; SsuA 894020 ssuA 5460141 ssuA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SsuA YP_001420508.1 893031 D 326423 CDS YP_001420509.1 154685348 5460142 894020..894853 1 NC_009725.1 aliphatic sulfonates transport permease protein SsuC; SsuC 894853 ssuC 5460142 ssuC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SsuC YP_001420509.1 894020 D 326423 CDS YP_001420510.1 154685349 5460143 894878..896014 1 NC_009725.1 catalyzes the release of sulfite from alkanesulfonates; alkanesulfonate monooxygenase 896014 ssuD 5460143 ssuD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 alkanesulfonate monooxygenase YP_001420510.1 894878 D 326423 CDS YP_001420511.1 154685350 5460503 896189..896458 1 NC_009725.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 896458 rpsN 5460503 rpsN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 30S ribosomal protein S14 YP_001420511.1 896189 D 326423 CDS YP_001420512.1 154685351 5460504 complement(896479..896946) 1 NC_009725.1 hypothetical lipoprotein YgaO; hypothetical protein 896946 ygaO 5460504 ygaO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420512.1 896479 R 326423 CDS YP_001420513.1 154685352 5460506 complement(897500..898123) 1 NC_009725.1 conserved hypothetical protein YhzB; hypothetical protein 898123 yhzB 5460506 yhzB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420513.1 897500 R 326423 CDS YP_001420514.1 154685353 5460507 898199..899368 1 NC_009725.1 conserved hypothetical protein YhbA; hypothetical protein 899368 yhbA 5460507 yhbA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420514.1 898199 D 326423 CDS YP_001420515.1 154685354 5462094 899444..900355 1 NC_009725.1 hypothetical protein YhbB; hypothetical protein 900355 yhbB 5462094 yhbB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420515.1 899444 D 326423 CDS YP_001420516.1 154685355 5462095 900401..900874 1 NC_009725.1 rRNA methylase involved in elicitation plant basal defence; hypothetical protein 900874 cspR 5462095 cspR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420516.1 900401 D 326423 CDS YP_001420517.1 154685356 5462096 900972..901643 1 NC_009725.1 hypothetical protein YhbD; hypothetical protein 901643 yhbD 5462096 yhbD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420517.1 900972 D 326423 CDS YP_001420518.1 154685357 5462097 901634..902347 1 NC_009725.1 hypothetical protein YhbE; hypothetical protein 902347 yhbE 5462097 yhbE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420518.1 901634 D 326423 CDS YP_001420519.1 154685358 5462098 902359..903069 1 NC_009725.1 conserved hypothetical protein YhbF; hypothetical protein 903069 yhbF 5462098 yhbF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420519.1 902359 D 326423 CDS YP_001420520.1 154685359 5462099 903428..905323 1 NC_009725.1 serine protein kinase PrkA; hypothetical protein 905323 prkA 5462099 prkA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420520.1 903428 D 326423 CDS YP_001420521.1 154685360 5461339 905514..906698 1 NC_009725.1 stress response UPF0229 protein YhbH; hypothetical protein 906698 yhbH 5461339 yhbH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420521.1 905514 D 326423 CDS YP_001420522.1 154685361 5461340 906879..907343 1 NC_009725.1 transcriptional regulator (MarR family)YhbI; hypothetical protein 907343 yhbI 5461340 yhbI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420522.1 906879 D 326423 CDS YP_001420523.1 154685362 5461341 907380..908045 1 NC_009725.1 hypothetical protein YhbJ; hypothetical protein 908045 yhbJ 5461341 yhbJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420523.1 907380 D 326423 CDS YP_001420524.1 154685363 5461342 908086..909681 1 NC_009725.1 hypothetical transport protein YhcA; hypothetical protein 909681 yhcA 5461342 yhcA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420524.1 908086 D 326423 CDS YP_001420525.1 154685364 5461343 909706..910239 1 NC_009725.1 conserved hypothetical protein YhcB; hypothetical protein 910239 yhcB 5461343 yhcB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420525.1 909706 D 326423 CDS YP_001420526.1 154685365 5461344 910252..910623 1 NC_009725.1 hypothetical protein YhcC; hypothetical protein 910623 yhcC 5461344 yhcC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420526.1 910252 D 326423 CDS YP_001420527.1 154685366 5463082 910743..911510 1 NC_009725.1 hypothetical protein YhcE; hypothetical protein 911510 yhcE 5463082 yhcE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420527.1 910743 D 326423 CDS YP_001420528.1 154685367 5463083 911513..911890 1 NC_009725.1 transcriptional regulator YhcF; hypothetical protein 911890 yhcF 5463083 yhcF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420528.1 911513 D 326423 CDS YP_001420529.1 154685368 5463084 911862..912596 1 NC_009725.1 ABC transporter ATP-binding protein YhcG; hypothetical protein 912596 yhcG 5463084 yhcG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420529.1 911862 D 326423 CDS YP_001420530.1 154685369 5463085 912597..913514 1 NC_009725.1 ABC transporter (ATP-binding protein) YhcH; hypothetical protein 913514 yhcH 5463085 yhcH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420530.1 912597 D 326423 CDS YP_001420531.1 154685370 5463086 913507..914454 1 NC_009725.1 conserved hypothetical protein YhcI; hypothetical protein 914454 yhcI 5463086 yhcI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420531.1 913507 D 326423 CDS YP_001420532.1 154685371 5463087 complement(914546..914746) 1 NC_009725.1 major cold shock protein; involved in elicitation plant basal defence; hypothetical protein 914746 cspB 5463087 cspB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420532.1 914546 R 326423 CDS YP_001420533.1 154685372 5459976 915128..915958 1 NC_009725.1 hypothetical lipoprotein YhcJ; hypothetical protein 915958 yhcJ 5459976 yhcJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420533.1 915128 D 326423 CDS YP_001420534.1 154685373 5459977 complement(915975..917054) 1 NC_009725.1 conserved hypothetical protein YhcK; hypothetical protein 917054 yhcK 5459977 yhcK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420534.1 915975 R 326423 CDS YP_001420535.1 154685374 5459978 917206..918597 1 NC_009725.1 sodium-dicarboxylate symporter YhcL; hypothetical protein 918597 yhcL 5459978 yhcL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420535.1 917206 D 326423 CDS YP_001420536.1 154685375 5459979 complement(918698..919276) 1 NC_009725.1 hypothetical protein YhcM; hypothetical protein 919276 yhcM 5459979 yhcM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420536.1 918698 R 326423 CDS YP_001420537.1 154685376 5459980 919421..919960 1 NC_009725.1 lipoprotein YhcN; hypothetical protein 919960 yhcN 5459980 yhcN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420537.1 919421 D 326423 CDS YP_001420538.1 154685377 5459981 920093..920983 1 NC_009725.1 hypothetical protein YhcP; hypothetical protein 920983 yhcP 5459981 yhcP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420538.1 920093 D 326423 CDS YP_001420539.1 154685378 5461067 complement(920984..921652) 1 NC_009725.1 conserved hypothetical protein YhcQ; hypothetical protein 921652 yhcQ 5461067 yhcQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420539.1 920984 R 326423 CDS YP_001420540.1 154685379 5461068 921845..923674 1 NC_009725.1 5'-nucleotidase YhcR; hypothetical protein 923674 yhcR 5461068 yhcR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420540.1 921845 D 326423 CDS YP_001420541.1 154685380 5461069 923895..924491 1 NC_009725.1 conserved hypothetical protein YhcS; hypothetical protein 924491 yhcS 5461069 yhcS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420541.1 923895 D 326423 CDS YP_001420542.1 154685381 5461070 complement(924488..925396) 1 NC_009725.1 hypothetical pseudouridine synthase yhcT (pseudouridylate synthase) (Uracil hydrolyase) YhcT; hypothetical protein 925396 yhcT 5461070 yhcT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420542.1 924488 R 326423 CDS YP_001420543.1 154685382 5461071 925506..925901 1 NC_009725.1 hypothetical protein YhcU; hypothetical protein 925901 yhcU 5461071 yhcU Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420543.1 925506 D 326423 CDS YP_001420544.1 154685383 5461072 926032..926454 1 NC_009725.1 conserved hypothetical protein YhcV; hypothetical protein 926454 yhcV 5461072 yhcV Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420544.1 926032 D 326423 CDS YP_001420545.1 154685384 5460491 926582..927271 1 NC_009725.1 phosphoglycolate phosphatase YhcW; hypothetical protein 927271 yhcW 5460491 yhcW Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420545.1 926582 D 326423 CDS YP_001420546.1 154685385 5460492 927264..928802 1 NC_009725.1 predicted nitrilase; possibly involved in Trp dependent IAA synthesis. Mutant yhcX was found slightly impaired in IAA synthesis and plant growth promotion; hypothetical protein 928802 yhcX 5460492 yhcX Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420546.1 927264 D 326423 CDS YP_001420547.1 154685386 5460493 929055..930398 1 NC_009725.1 aminotransferase YhxA; aminotransferase 930398 yhxA 5460493 yhxA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 aminotransferase YP_001420547.1 929055 D 326423 CDS YP_001420548.1 154685387 5460494 930415..930990 1 NC_009725.1 glycerol uptake operon antiterminator regulatoryprotein GlpP; hypothetical protein 930990 glpP 5460494 glpP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420548.1 930415 D 326423 CDS YP_001420549.1 154685388 5460495 931160..931990 1 NC_009725.1 glycerol uptake facilitator GlpF; hypothetical protein 931990 glpF 5460495 glpF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420549.1 931160 D 326423 CDS YP_001420550.1 154685389 5460496 932007..933497 1 NC_009725.1 Converts glycerol and ADP to glycerol-3-phosphate and ADP; glycerol kinase 933497 glpK 5460496 glpK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 glycerol kinase YP_001420550.1 932007 D 326423 CDS YP_001420551.1 154685390 5462975 933635..935302 1 NC_009725.1 glycerol-3-phosphate dehydrogenase GlpD; GlpD 935302 glpD 5462975 glpD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GlpD YP_001420551.1 933635 D 326423 CDS YP_001420552.1 154685391 5462976 935442..937184 1 NC_009725.1 phosphomannomutase; likely to be involved in exopolysaccharide synthesis; hypothetical protein 937184 yhxB 5462976 yhxB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420552.1 935442 D 326423 CDS YP_001420553.1 154685392 5462977 937330..938472 1 NC_009725.1 sensor histidine kinase; COG4585, two component signal transduction; hypothetical protein 938472 yhcY 5462977 yhcY Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420553.1 937330 D 326423 CDS YP_001420554.1 154685393 5462978 938472..939116 1 NC_009725.1 two component response regulator; COG2197, CitB family, RR containing a CheY-like receiver domain and a HTH DNA-binding domain; hypothetical protein 939116 yhcZ 5462978 yhcZ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420554.1 938472 D 326423 CDS YP_001420555.1 154685394 5462979 939113..939640 1 NC_009725.1 conserved hypothetical protein YhdA; hypothetical protein 939640 yhdA 5462979 yhdA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420555.1 939113 D 326423 CDS YP_001420556.1 154685395 5462980 complement(939654..939896) 1 NC_009725.1 hypothetical protein YhdB; hypothetical protein 939896 yhdB 5462980 yhdB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420556.1 939654 R 326423 CDS YP_001420557.1 154685396 5462486 940088..940411 1 NC_009725.1 hypothetical protein YhdC; hypothetical protein 940411 yhdC 5462486 yhdC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420557.1 940088 D 326423 CDS YP_001420558.1 154685397 5462487 complement(940456..941910) 1 NC_009725.1 endopeptidase lytF precursor LytF; LytF 941910 lytF 5462487 lytF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 LytF YP_001420558.1 940456 R 326423 CDS YP_001420559.1 154685398 5462488 complement(942089..942523) 1 NC_009725.1 conserved hypothetical protein YhdE; hypothetical protein 942523 yhdE 5462488 yhdE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420559.1 942089 R 326423 CDS YP_001420560.1 154685399 5462489 complement(942656..944218) 1 NC_009725.1 conserved hypothetical protein YgxB; hypothetical protein 944218 ygxB 5462489 ygxB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420560.1 942656 R 326423 CDS YP_001420561.1 154685400 5462490 944340..945746 1 NC_009725.1 stage V sporulation protein SpoVR; hypothetical protein 945746 spoVR 5462490 spoVR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420561.1 944340 D 326423 CDS YP_001420562.1 154685401 5462491 complement(945785..947164) 1 NC_009725.1 alkaline phosphatase IV precursor (APase IV) PhoA; PhoA 947164 phoA 5462491 phoA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 PhoA YP_001420562.1 945785 R 326423 CDS YP_001420563.1 154685402 5461135 947624..948448 1 NC_009725.1 cell wall hydrolase phosphatase-associated protein LytE; hypothetical protein 948448 lytE 5461135 lytE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420563.1 947624 D 326423 CDS YP_001420564.1 154685403 5461136 complement(948517..949392) 1 NC_009725.1 HTH-type transcriptional regulator (Citrate synthase I repressor) CitR; CitR 949392 citR 5461136 citR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 CitR YP_001420564.1 948517 R 326423 CDS YP_001420565.1 154685404 5461137 949496..950605 1 NC_009725.1 citrate synthase I CitA; hypothetical protein 950605 citA 5461137 citA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420565.1 949496 D 326423 CDS YP_001420566.1 154685405 5461138 950685..951554 1 NC_009725.1 glucose 1-dehydrogenase YhdF; hypothetical protein 951554 yhdF 5461138 yhdF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420566.1 950685 D 326423 CDS YP_001420567.1 154685406 5461139 951888..953291 1 NC_009725.1 amino acid transporter YhdG; hypothetical protein 953291 yhdG 5461139 yhdG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420567.1 951888 D 326423 CDS YP_001420568.1 154685407 5461140 953406..954761 1 NC_009725.1 sodium-dependent transporter YhdH; hypothetical protein 954761 yhdH 5461140 yhdH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420568.1 953406 D 326423 CDS YP_001420569.1 154685408 5462254 complement(954798..955088) 1 NC_009725.1 anti-sigma M factor YhdK; hypothetical protein 955088 yhdK 5462254 yhdK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420569.1 954798 R 326423 CDS YP_001420570.1 154685409 5462255 complement(955076..956149) 1 NC_009725.1 anti-sigma M factor YhdL; hypothetical protein 956149 yhdL 5462255 yhdL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420570.1 955076 R 326423 CDS YP_001420571.1 154685410 5462256 complement(956142..956633) 1 NC_009725.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; in B. subtilis this protein is activated in response to cell wall antibiotics, ethanol, heat, acid, and superoxide stress; RNA polymerase sigma factor SigM 956633 sigM 5462256 sigM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 RNA polymerase sigma factor SigM YP_001420571.1 956142 R 326423 CDS YP_001420572.1 154685411 5462257 956874..957473 1 NC_009725.1 1-acylglycerol-3-phosphate o-acyltransferase YhdO; hypothetical protein 957473 yhdO 5462257 yhdO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420572.1 956874 D 326423 CDS YP_001420573.1 154685412 5462258 complement(957519..958853) 1 NC_009725.1 conserved hypothetical protein YhdP; TlyC family hemolysin 958853 yhdP 5462258 yhdP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 TlyC family hemolysin YP_001420573.1 957519 R 326423 CDS YP_001420574.1 154685413 5462259 complement(958915..959340) 1 NC_009725.1 HTH-type transcriptional regulator CueR; CueR 959340 cueR 5462259 cueR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 CueR YP_001420574.1 958915 R 326423 CDS YP_001420575.1 154685414 5460699 959520..960704 1 NC_009725.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 960704 yhdR 5460699 yhdR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 aspartate aminotransferase YP_001420575.1 959520 D 326423 CDS YP_001420576.1 154685415 5460700 960737..961981 1 NC_009725.1 involved in polyketide production; polyketide beta-ketoacyl:acyl carrier protein synthase 961981 5460700 RBAM_009810 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 polyketide beta-ketoacyl:acyl carrier protein synthase YP_001420576.1 960737 D 326423 CDS YP_001420577.1 154685416 5460701 962211..963599 1 NC_009725.1 hemolysin YhdT; hypothetical protein 963599 yhdT 5460701 yhdT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420577.1 962211 D 326423 CDS YP_001420578.1 154685417 5460702 complement(963613..963972) 1 NC_009725.1 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB 963972 yhdU 5460702 yhdU Bacillus amyloliquefaciens subsp. plantarum str. FZB42 camphor resistance protein CrcB YP_001420578.1 963613 R 326423 CDS YP_001420579.1 154685418 5460703 complement(963969..964364) 1 NC_009725.1 conserved hypothetical protein YhdV; hypothetical protein 964364 yhdV 5460703 yhdV Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420579.1 963969 R 326423 CDS YP_001420580.1 154685419 5460704 complement(964366..965082) 1 NC_009725.1 glycerophosphodiester phosphodiesterase YhdW; hypothetical protein 965082 yhdW 5460704 yhdW Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420580.1 964366 R 326423 CDS YP_001420581.1 154685420 5459720 965252..965356 1 NC_009725.1 hypothetical protein YhdX; hypothetical protein 965356 yhdX 5459720 yhdX Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420581.1 965252 D 326423 CDS YP_001420582.1 154685421 5459721 965519..966634 1 NC_009725.1 conserved hypothetical protein YhdY; hypothetical protein 966634 yhdY 5459721 yhdY Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420582.1 965519 D 326423 CDS YP_001420583.1 154685422 5459722 966686..967429 1 NC_009725.1 Modulates the activities of several enzymes which are inactive in their acetylated form; NAD-dependent deacetylase 967429 npdA 5459722 npdA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 NAD-dependent deacetylase YP_001420583.1 966686 D 326423 CDS YP_001420584.1 154685423 5459723 complement(967463..968311) 1 NC_009725.1 conserved hypothetical protein YheN; hypothetical protein 968311 yheN 5459723 yheN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420584.1 967463 R 326423 CDS YP_001420585.1 154685424 5459724 968568..969419 1 NC_009725.1 D-alanine aminotransferase Dat; Dat 969419 dat 5459724 dat Bacillus amyloliquefaciens subsp. plantarum str. FZB42 Dat YP_001420585.1 968568 D 326423 CDS YP_001420586.1 154685425 5459725 complement(969461..970045) 1 NC_009725.1 HTH-type transcriptional regulator PksA; PksA 970045 pksA 5459725 pksA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 PksA YP_001420586.1 969461 R 326423 CDS YP_001420587.1 154685426 5460520 970154..970705 1 NC_009725.1 hypothetical protein YmcC; hypothetical protein 970705 ymcC 5460520 ymcC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420587.1 970154 D 326423 CDS YP_001420588.1 154685427 5460521 complement(970744..971313) 1 NC_009725.1 stress response protein NhaX; NhaX 971313 nhaX 5460521 nhaX Bacillus amyloliquefaciens subsp. plantarum str. FZB42 NhaX YP_001420588.1 970744 R 326423 CDS YP_001420589.1 154685428 5460522 971666..973423 1 NC_009725.1 ABC transporter (ATP-binding protein) YheI; hypothetical protein 973423 yheI 5460522 yheI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420589.1 971666 D 326423 CDS YP_001420590.1 154685429 5460523 973420..975441 1 NC_009725.1 ABC transporter (ATP-binding protein) YheH; hypothetical protein 975441 yheH 5460523 yheH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420590.1 973420 D 326423 CDS YP_001420591.1 154685430 5460524 complement(975481..976101) 1 NC_009725.1 conserved hypothetical protein YheG; hypothetical protein 976101 yheG 5460524 yheG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420591.1 975481 R 326423 CDS YP_001420592.1 154685431 5460525 complement(976130..976255) 1 NC_009725.1 hypothetical protein YheF; hypothetical protein 976255 yheF 5460525 yheF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420592.1 976130 R 326423 CDS YP_001420593.1 154685432 5461129 complement(976357..976563) 1 NC_009725.1 small acid-soluble spore protein (beta-type SASP) SspB; SspB 976563 sspB 5461129 sspB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SspB YP_001420593.1 976357 R 326423 CDS YP_001420594.1 154685433 5461130 complement(976788..977003) 1 NC_009725.1 hypothetical protein YheE; hypothetical protein 977003 yheE 5461130 yheE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420594.1 976788 R 326423 CDS YP_001420595.1 154685434 5461131 complement(977086..978444) 1 NC_009725.1 hypothetical protein YheD; hypothetical protein 978444 yheD 5461131 yheD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420595.1 977086 R 326423 CDS YP_001420596.1 154685435 5461132 complement(978434..979525) 1 NC_009725.1 hypothetical protein YheC; hypothetical protein 979525 yheC 5461132 yheC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420596.1 978434 R 326423 CDS YP_001420597.1 154685436 5461133 979763..980896 1 NC_009725.1 conserved hypothetical protein YheB; hypothetical protein 980896 yheB 5461133 yheB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420597.1 979763 D 326423 CDS YP_001420598.1 154685437 5461134 980982..981332 1 NC_009725.1 conserved hypothetical protein YheA; hypothetical protein 981332 yheA 5461134 yheA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420598.1 980982 D 326423 CDS YP_001420599.1 154685438 5459563 complement(981371..982444) 1 NC_009725.1 conserved hypothetical protein YhaZ; hypothetical protein 982444 yhaZ 5459563 yhaZ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420599.1 981371 R 326423 CDS YP_001420600.1 154685439 5459564 complement(982630..982851) 1 NC_009725.1 hypothetical protein YhaY; hypothetical protein 982851 yhaY 5459564 yhaY Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420600.1 982630 R 326423 CDS YP_001420601.1 154685440 5459565 982894..983760 1 NC_009725.1 stress response protein YhaX; hypothetical protein 983760 yhaX 5459565 yhaX Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420601.1 982894 D 326423 CDS YP_001420602.1 154685441 5459566 983873..985375 1 NC_009725.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 985375 hemZ 5459566 hemZ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 coproporphyrinogen III oxidase YP_001420602.1 983873 D 326423 CDS YP_001420603.1 154685442 5459567 985468..986766 1 NC_009725.1 lysine/ornithine N-monooxygenase 986766 5459567 RBAM_010080 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 lysine/ornithine N-monooxygenase YP_001420603.1 985468 D 326423 CDS YP_001420604.1 154685443 5459568 complement(986792..988006) 1 NC_009725.1 Na+/H+ antiporter YhaU; hypothetical protein 988006 yhaU 5459568 yhaU Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420604.1 986792 R 326423 CDS YP_001420605.1 154685444 5460842 complement(988014..988511) 1 NC_009725.1 conserved hypothetical protein YhaT; hypothetical protein 988511 yhaT 5460842 yhaT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420605.1 988014 R 326423 CDS YP_001420606.1 154685445 5460843 complement(988539..988892) 1 NC_009725.1 hypothetical protein YhaS; hypothetical protein 988892 yhaS 5460843 yhaS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420606.1 988539 R 326423 CDS YP_001420607.1 154685446 5460844 989077..989844 1 NC_009725.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 989844 yhaR 5460844 yhaR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 enoyl-CoA hydratase YP_001420607.1 989077 D 326423 CDS YP_001420608.1 154685447 5460845 990160..991056 1 NC_009725.1 ABC transporter (ATP-binding protein) YhaQ; hypothetical protein 991056 yhaQ 5460845 yhaQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420608.1 990160 D 326423 CDS YP_001420609.1 154685448 5460846 991049..992308 1 NC_009725.1 conserved hypothetical protein YhaP; hypothetical protein 992308 yhaP 5460846 yhaP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420609.1 991049 D 326423 CDS YP_001420610.1 154685449 5460847 992419..993642 1 NC_009725.1 hypothetical protein YhaO; hypothetical protein 993642 yhaO 5460847 yhaO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420610.1 992419 D 326423 CDS YP_001420611.1 154685450 5461218 993639..996521 1 NC_009725.1 conserved hypothetical protein YhaN; hypothetical protein 996521 yhaN 5461218 yhaN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420611.1 993639 D 326423 CDS YP_001420612.1 154685451 5461219 996595..997539 1 NC_009725.1 catalyzes the exonucleic cleavage of mRNA yielding nucleioside 5'-phosphates; 3'-5' exoribonuclease 997539 yhaM 5461219 yhaM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 3'-5' exoribonuclease YP_001420612.1 996595 D 326423 CDS YP_001420613.1 154685452 5461220 997654..997881 1 NC_009725.1 hypothetical protein YhaL; hypothetical protein 997881 yhaL 5461220 yhaL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420613.1 997654 D 326423 CDS YP_001420614.1 154685453 5461221 complement(997920..998771) 1 NC_009725.1 foldase protein prsA precursor PrsA; hypothetical protein 998771 prsA 5461221 prsA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420614.1 997920 R 326423 CDS YP_001420615.1 154685454 5461222 complement(999284..999502) 1 NC_009725.1 hypothetical protein 999502 5461222 RBAM_010200 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420615.1 999284 R 326423 CDS YP_001420616.1 154685455 5461223 complement(999563..1000093) 1 NC_009725.1 conserved hypothetical protein YhaK; hypothetical protein 1000093 yhaK 5461223 yhaK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420616.1 999563 R 326423 CDS YP_001420617.1 154685456 5459923 1000304..1000645 1 NC_009725.1 hypothetical protein YhaI; hypothetical protein 1000645 yhaI 5459923 yhaI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420617.1 1000304 D 326423 CDS YP_001420618.1 154685457 5459924 complement(1000642..1001253) 1 NC_009725.1 hpr; ScoC; MarR family; protease production regulatory protein; transcriptional regulator Hpr 1001253 hpr 5459924 hpr Bacillus amyloliquefaciens subsp. plantarum str. FZB42 transcriptional regulator Hpr YP_001420618.1 1000642 R 326423 CDS YP_001420619.1 154685458 5459925 complement(1001434..1001790) 1 NC_009725.1 hypothetical protein YhaH; hypothetical protein 1001790 yhaH 5459925 yhaH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420619.1 1001434 R 326423 CDS YP_001420620.1 154685459 5459926 complement(1002157..1002675) 1 NC_009725.1 hypothetical protein YhaG; hypothetical protein 1002675 yhaG 5459926 yhaG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420620.1 1002157 R 326423 CDS YP_001420621.1 154685460 5459927 complement(1002796..1003875) 1 NC_009725.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase 1003875 serC 5459927 serC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 phosphoserine aminotransferase YP_001420621.1 1002796 R 326423 CDS YP_001420622.1 154685461 5459928 complement(1004011..1004448) 1 NC_009725.1 cell-cycle regulation histidine triad (HIT) protein Hit; hypothetical protein 1004448 hit 5459928 hit Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420622.1 1004011 R 326423 CDS YP_001420623.1 154685462 5462088 1004939..1005682 1 NC_009725.1 ABC-type transporter ATP-binding protein; protein secretion to extracellular matrix; EcsA 1005682 ecsA 5462088 ecsA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 EcsA YP_001420623.1 1004939 D 326423 CDS YP_001420624.1 154685463 5462089 1005675..1006901 1 NC_009725.1 ABC-type transporter;secretion to extracellular matrix; EcsB 1006901 ecsB 5462089 ecsB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 EcsB YP_001420624.1 1005675 D 326423 CDS YP_001420625.1 154685464 5462090 1006944..1007648 1 NC_009725.1 ABC-type transporter; protein secretion to extracellular matrix; EcsC 1007648 ecsC 5462090 ecsC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 EcsC YP_001420625.1 1006944 D 326423 CDS YP_001420626.1 154685465 5462091 complement(1007671..1008858) 1 NC_009725.1 aminoacylase YhaA; hypothetical protein 1008858 yhaA 5462091 yhaA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420626.1 1007671 R 326423 CDS YP_001420627.1 154685466 5462092 complement(1008928..1010313) 1 NC_009725.1 hypothetical protein YhfA; hypothetical protein 1010313 yhfA 5462092 yhfA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420627.1 1008928 R 326423 CDS YP_001420628.1 154685467 5462093 complement(1010431..1010931) 1 NC_009725.1 hypothetical protein YhgC; hypothetical protein 1010931 yhgC 5462093 yhgC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420628.1 1010431 R 326423 CDS YP_001420629.1 154685468 5461428 1011054..1013195 1 NC_009725.1 penicillin-binding protein 2C PbpF; PbpF 1013195 pbpF 5461428 pbpF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 PbpF YP_001420629.1 1011054 D 326423 CDS YP_001420630.1 154685469 5461429 1013319..1014380 1 NC_009725.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 1014380 hemE 5461429 hemE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 uroporphyrinogen decarboxylase YP_001420630.1 1013319 D 326423 CDS YP_001420631.1 154685470 5461430 1014456..1015391 1 NC_009725.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 1015391 hemH 5461430 hemH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ferrochelatase YP_001420631.1 1014456 D 326423 CDS YP_001420632.1 154685471 5461431 1015419..1016852 1 NC_009725.1 catalyzes the formation of protoporphyrin IX from protoporphyrinogen IX; protoporphyrinogen oxidase 1016852 hemY 5461431 hemY Bacillus amyloliquefaciens subsp. plantarum str. FZB42 protoporphyrinogen oxidase YP_001420632.1 1015419 D 326423 CDS YP_001420633.1 154685472 5461432 1017001..1017573 1 NC_009725.1 HTH-type transcriptional regulator YhgD; hypothetical protein 1017573 yhgD 5461432 yhgD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420633.1 1017001 D 326423 CDS YP_001420634.1 154685473 5461433 1017648..1019981 1 NC_009725.1 conserved hypothetical protein YhgE; hypothetical protein 1019981 yhgE 5461433 yhgE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420634.1 1017648 D 326423 CDS YP_001420635.1 154685474 5461389 complement(1020043..1021020) 1 NC_009725.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; in Pseudomonas this protein is involved in quinolone signal biosynthesis; 3-oxoacyl-ACP synthase 1021020 fabHB 5461389 fabHB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 3-oxoacyl-ACP synthase YP_001420635.1 1020043 R 326423 CDS YP_001420636.1 154685475 5461390 1021502..1022542 1 NC_009725.1 glucanase/aminopeptidase; hypothetical protein 1022542 yhfE 5461390 yhfE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420636.1 1021502 D 326423 CDS YP_001420637.1 154685476 5461391 complement(1022583..1023872) 1 NC_009725.1 proton/sodium-glutamate symport protein GltT; GltT 1023872 gltT 5461391 gltT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GltT YP_001420637.1 1022583 R 326423 CDS YP_001420638.1 154685477 5461392 complement(1024107..1024247) 1 NC_009725.1 hypothetical protein YhfH; hypothetical protein 1024247 yhfH 5461392 yhfH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420638.1 1024107 R 326423 CDS YP_001420639.1 154685478 5461393 1024399..1025133 1 NC_009725.1 conserved hypothetical protein YhfI; hypothetical protein 1025133 yhfI 5461393 yhfI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420639.1 1024399 D 326423 CDS YP_001420640.1 154685479 5461394 1025146..1026141 1 NC_009725.1 lipoate-protein ligase YhfJ; hypothetical protein 1026141 yhfJ 5461394 yhfJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420640.1 1025146 D 326423 CDS YP_001420641.1 154685480 5463254 1026219..1026866 1 NC_009725.1 hypothetical protein YhfK; hypothetical protein 1026866 yhfK 5463254 yhfK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420641.1 1026219 D 326423 CDS YP_001420642.1 154685481 5463255 1026999..1028540 1 NC_009725.1 activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 1028540 yhfL 5463255 yhfL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 long-chain-fatty-acid--CoA ligase YP_001420642.1 1026999 D 326423 CDS YP_001420643.1 154685482 5463256 complement(1028588..1028983) 1 NC_009725.1 hypothetical protein YhfM; hypothetical protein 1028983 yhfM 5463256 yhfM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420643.1 1028588 R 326423 CDS YP_001420644.1 154685483 5463257 1029138..1030388 1 NC_009725.1 conserved hypothetical protein YhfN; hypothetical protein 1030388 yhfN 5463257 yhfN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420644.1 1029138 D 326423 CDS YP_001420645.1 154685484 5463258 complement(1030434..1031582) 1 NC_009725.1 serine alkaline protease (subtilisin E) AprE; hypothetical protein 1031582 aprE 5463258 aprE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420645.1 1030434 R 326423 CDS YP_001420646.1 154685485 5463259 1032072..1032950 1 NC_009725.1 conserved hypothetical protein YhfQ; hypothetical protein 1032950 yhfQ 5463259 yhfQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420646.1 1032072 D 326423 CDS YP_001420647.1 154685486 5462694 complement(1032966..1033541) 1 NC_009725.1 2,3-diphosphoglycerate-dependent phosphoglycerate mutase YhfR; hypothetical protein 1033541 yhfR 5462694 yhfR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420647.1 1032966 R 326423 CDS YP_001420648.1 154685487 5462695 complement(1033592..1034683) 1 NC_009725.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 1034683 yhfS 5462695 yhfS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 acetyl-CoA acetyltransferase YP_001420648.1 1033592 R 326423 CDS YP_001420649.1 154685488 5462696 complement(1034671..1036107) 1 NC_009725.1 activates fatty acids by binding to coenzyme A; acyl-CoA synthetase 1036107 yhfT 5462696 yhfT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 acyl-CoA synthetase YP_001420649.1 1034671 R 326423 CDS YP_001420650.1 154685489 5462697 complement(1036119..1036676) 1 NC_009725.1 biotin biosynthesis protein YhfU; hypothetical protein 1036676 yhfU 5462697 yhfU Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420650.1 1036119 R 326423 CDS YP_001420651.1 154685490 5462698 complement(1036807..1038099) 1 NC_009725.1 haem-based aerotactic transducer HemAT; HemAT 1038099 hemAT 5462698 hemAT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 HemAT YP_001420651.1 1036807 R 326423 CDS YP_001420652.1 154685491 5462699 complement(1038222..1039745) 1 NC_009725.1 Rieske [2Fe-2S] iron-sulfur protein YhfW; hypothetical protein 1039745 yhfW 5462699 yhfW Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420652.1 1038222 R 326423 CDS YP_001420653.1 154685492 5461034 1039870..1040727 1 NC_009725.1 alcohol dehydrogenase YhxC; hypothetical protein 1040727 yhxC 5461034 yhxC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420653.1 1039870 D 326423 CDS YP_001420654.1 154685493 5461035 complement(1040758..1040991) 1 NC_009725.1 hypothetical protein YhzC; hypothetical protein 1040991 yhzC 5461035 yhzC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420654.1 1040758 R 326423 CDS YP_001420655.1 154685494 5461036 1041306..1041884 1 NC_009725.1 competence transcription factor (CTF) ComK; ComK 1041884 comK 5461036 comK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ComK YP_001420655.1 1041306 D 326423 CDS YP_001420656.1 154685495 5461037 1042030..1042398 1 NC_009725.1 hypothetical protein 1042398 5461037 RBAM_010610 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420656.1 1042030 D 326423 CDS YP_001420657.1 154685496 5461038 1042425..1042796 1 NC_009725.1 hypothetical protein 1042796 5461038 RBAM_010620 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420657.1 1042425 D 326423 CDS YP_001420658.1 154685497 5461039 1042919..1043428 1 NC_009725.1 hypothetical protein 1043428 5461039 RBAM_010630 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420658.1 1042919 D 326423 CDS YP_001420659.1 154685498 5462177 complement(1043657..1044370) 1 NC_009725.1 hypothetical protein YrpD; hypothetical protein 1044370 yrpD 5462177 yrpD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420659.1 1043657 R 326423 CDS YP_001420660.1 154685499 5462178 1044563..1044832 1 NC_009725.1 hypothetical protein YhjA; hypothetical protein 1044832 yhjA 5462178 yhjA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420660.1 1044563 D 326423 CDS YP_001420661.1 154685500 5462179 complement(1044847..1045182) 1 NC_009725.1 hypothetical protein 1045182 5462179 RBAM_010660 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420661.1 1044847 R 326423 CDS YP_001420662.1 154685501 5462180 complement(1045224..1046693) 1 NC_009725.1 metabolite permease YhjB; hypothetical protein 1046693 yhjB 5462180 yhjB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420662.1 1045224 R 326423 CDS YP_001420663.1 154685502 5462181 complement(1046690..1046890) 1 NC_009725.1 conserved hypothetical protein YhjC; hypothetical protein 1046890 yhjC 5462181 yhjC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420663.1 1046690 R 326423 CDS YP_001420664.1 154685503 5462182 complement(1047011..1047370) 1 NC_009725.1 hypothetical protein YhjD; hypothetical protein 1047370 yhjD 5462182 yhjD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420664.1 1047011 R 326423 CDS YP_001420665.1 154685504 5460251 1047523..1048149 1 NC_009725.1 conserved hypothetical protein YhjE; hypothetical protein 1048149 yhjE 5460251 yhjE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420665.1 1047523 D 326423 CDS YP_001420666.1 154685505 5460252 1048146..1048661 1 NC_009725.1 type I signal peptidase SipV; SipV 1048661 sipV 5460252 sipV Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SipV YP_001420666.1 1048146 D 326423 CDS YP_001420667.1 154685506 5460253 1048809..1050287 1 NC_009725.1 monooxygenase YhjG; hypothetical protein 1050287 yhjG 5460253 yhjG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420667.1 1048809 D 326423 CDS YP_001420668.1 154685507 5460254 1050376..1050897 1 NC_009725.1 conserved hypothetical protein YhjH; hypothetical protein 1050897 yhjH 5460254 yhjH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420668.1 1050376 D 326423 CDS YP_001420669.1 154685508 5460255 complement(1050934..1052091) 1 NC_009725.1 conserved hypothetical protein YhjN; hypothetical protein 1052091 yhjN 5460255 yhjN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420669.1 1050934 R 326423 CDS YP_001420670.1 154685509 5460256 complement(1052259..1053455) 1 NC_009725.1 multidrug resistance protein II Blt; major facilitator transporter 1053455 blt 5460256 blt Bacillus amyloliquefaciens subsp. plantarum str. FZB42 major facilitator transporter YP_001420670.1 1052259 R 326423 CDS YP_001420671.1 154685510 5461534 complement(1053471..1054091) 1 NC_009725.1 hypothetical protein 1054091 5461534 RBAM_010760 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420671.1 1053471 R 326423 CDS YP_001420672.1 154685511 5461535 complement(1054342..1054851) 1 NC_009725.1 conserved hypothetical protein YhjR; hypothetical protein 1054851 yhjR 5461535 yhjR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420672.1 1054342 R 326423 CDS YP_001420673.1 154685512 5461536 complement(1054920..1055633) 1 NC_009725.1 conserved membrane protein YdfS; hypothetical protein 1055633 ydfS 5461536 ydfS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420673.1 1054920 R 326423 CDS YP_001420674.1 154685513 5461537 1055773..1059273 1 NC_009725.1 ATP-dependent deoxyribonuclease (subunit B) AddB; hypothetical protein 1059273 addB 5461537 addB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420674.1 1055773 D 326423 CDS YP_001420675.1 154685514 5461538 1059257..1062964 1 NC_009725.1 ATP-dependent deoxyribonuclease (subunit A) AddA; AddA 1062964 addA 5461538 addA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 AddA YP_001420675.1 1059257 D 326423 CDS YP_001420676.1 154685515 5461539 1063029..1064201 1 NC_009725.1 exonuclease SbcD; hypothetical protein 1064201 sbcD 5461539 sbcD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420676.1 1063029 D 326423 CDS YP_001420677.1 154685516 5462583 1064198..1067590 1 NC_009725.1 DNA exonuclease YirY; hypothetical protein 1067590 yirY 5462583 yirY Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420677.1 1064198 D 326423 CDS YP_001420678.1 154685517 5462584 1067606..1067899 1 NC_009725.1 hypothetical protein YisB; hypothetical protein 1067899 yisB 5462584 yisB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420678.1 1067606 D 326423 CDS YP_001420679.1 154685518 5462585 complement(1067943..1068161) 1 NC_009725.1 spore germination protein GerPF; GerPF 1068161 gerPF 5462585 gerPF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GerPF YP_001420679.1 1067943 R 326423 CDS YP_001420680.1 154685519 5462586 complement(1068201..1068596) 1 NC_009725.1 spore germination protein GerPE; GerPE 1068596 gerPE 5462586 gerPE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GerPE YP_001420680.1 1068201 R 326423 CDS YP_001420681.1 154685520 5462587 complement(1068596..1068772) 1 NC_009725.1 spore germination protein GerPD; GerPD 1068772 gerPD 5462587 gerPD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GerPD YP_001420681.1 1068596 R 326423 CDS YP_001420682.1 154685521 5462588 complement(1068769..1069386) 1 NC_009725.1 spore germination protein GerPC; GerPC 1069386 gerPC 5462588 gerPC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GerPC YP_001420682.1 1068769 R 326423 CDS YP_001420683.1 154685522 5460608 complement(1069422..1069658) 1 NC_009725.1 spore germination protein GerPB; GerPB 1069658 gerPB 5460608 gerPB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GerPB YP_001420683.1 1069422 R 326423 CDS YP_001420684.1 154685523 5460609 complement(1069671..1069892) 1 NC_009725.1 spore germination protein GerPA; GerPA 1069892 gerPA 5460609 gerPA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GerPA YP_001420684.1 1069671 R 326423 CDS YP_001420685.1 154685524 5460610 complement(1070082..1070297) 1 NC_009725.1 hypothetical protein YisI; hypothetical protein 1070297 yisI 5460610 yisI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420685.1 1070082 R 326423 CDS YP_001420686.1 154685525 5460611 1070515..1071420 1 NC_009725.1 5-oxo-1,2,5-tricarboxilic-3-penten aciddecarboxylase YisK; hypothetical protein 1071420 yisK 5460611 yisK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420686.1 1070515 D 326423 CDS YP_001420687.1 154685526 5460612 1071514..1071870 1 NC_009725.1 conserved hypothetical protein YisL; hypothetical protein 1071870 yisL 5460612 yisL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420687.1 1071514 D 326423 CDS YP_001420688.1 154685527 5460613 complement(1071867..1072100) 1 NC_009725.1 hypothetical protein 1072100 5460613 RBAM_010930 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420688.1 1071867 R 326423 CDS YP_001420689.1 154685528 5461813 complement(1072136..1072726) 1 NC_009725.1 conserved hypothetical protein YisN; hypothetical protein 1072726 yisN 5461813 yisN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420689.1 1072136 R 326423 CDS YP_001420690.1 154685529 5461814 1072854..1074695 1 NC_009725.1 asparagine synthetase [glutamine-hydrolyzing] III AsnO; AsnO 1074695 asnO 5461814 asnO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 AsnO YP_001420690.1 1072854 D 326423 CDS YP_001420691.1 154685530 5461815 1074781..1075521 1 NC_009725.1 phytoene synthase YisP; hypothetical protein 1075521 yisP 5461815 yisP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420691.1 1074781 D 326423 CDS YP_001420692.1 154685531 5461816 complement(1075557..1076924) 1 NC_009725.1 conserved hypothetical protein YisQ; hypothetical protein 1076924 yisQ 5461816 yisQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420692.1 1075557 R 326423 CDS YP_001420693.1 154685532 5461817 1077047..1077910 1 NC_009725.1 HTH-type transcriptional regulator YisR; hypothetical protein 1077910 yisR 5461817 yisR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420693.1 1077047 D 326423 CDS YP_001420694.1 154685533 5461818 complement(1078053..1078547) 1 NC_009725.1 nuclease inhibitor YisT; hypothetical protein 1078547 yisT 5461818 yisT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420694.1 1078053 R 326423 CDS YP_001420695.1 154685534 5461630 complement(1078701..1079327) 1 NC_009725.1 conserved hypothetical protein YisX; hypothetical protein 1079327 yisX 5461630 yisX Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420695.1 1078701 R 326423 CDS YP_001420696.1 154685535 5461631 complement(1079524..1079964) 1 NC_009725.1 hypothetical protein YitI; hypothetical protein 1079964 yitI 5461631 yitI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420696.1 1079524 R 326423 CDS YP_001420697.1 154685536 5461632 complement(1080047..1081888) 1 NC_009725.1 catalyzes the formation of 5,10-methylenetetrahydrofolate from 5-methyltetrahydrofolate and S-adenosyl-L-homocysteine and methionine from S-adenosyl-L-methionine and L-homocysteine; expressed in B. subtilis under methionine starvation conditions; bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein 1081888 yitJ 5461632 yitJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein YP_001420697.1 1080047 R 326423 CDS YP_001420698.1 154685537 5461633 complement(1082200..1082691) 1 NC_009725.1 nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; nucleotide-binding protein 1082691 yitk 5461633 yitk Bacillus amyloliquefaciens subsp. plantarum str. FZB42 nucleotide-binding protein YP_001420698.1 1082200 R 326423 CDS YP_001420699.1 154685538 5461634 1082839..1083687 1 NC_009725.1 conserved hypothetical protein YitL; hypothetical protein 1083687 yitL 5461634 yitL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420699.1 1082839 D 326423 CDS YP_001420700.1 154685539 5461635 1083858..1084835 1 NC_009725.1 hypothetical protein 1084835 5461635 RBAM_011050 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420700.1 1083858 D 326423 CDS YP_001420701.1 154685540 5460963 1084832..1086481 1 NC_009725.1 hypothetical protein 1086481 5460963 RBAM_011060 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420701.1 1084832 D 326423 CDS YP_001420702.1 154685541 5460964 1086614..1087864 1 NC_009725.1 cytochrome P450 152A1 CypC; CypC 1087864 cypC 5460964 cypC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 CypC YP_001420702.1 1086614 D 326423 CDS YP_001420703.1 154685542 5460965 complement(1088084..1088935) 1 NC_009725.1 conserved hypothetical protein YitS; hypothetical protein 1088935 yitS 5460965 yitS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420703.1 1088084 R 326423 CDS YP_001420704.1 154685543 5460966 1089061..1089903 1 NC_009725.1 conserved hypothetical protein YitT; hypothetical protein 1089903 yitT 5460966 yitT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420704.1 1089061 D 326423 CDS YP_001420705.1 154685544 5460967 1089918..1090379 1 NC_009725.1 intracellular proteinase inhibitor Ipi; Ipi 1090379 ipi 5460967 ipi Bacillus amyloliquefaciens subsp. plantarum str. FZB42 Ipi YP_001420705.1 1089918 D 326423 CDS YP_001420706.1 154685545 5460968 complement(1090416..1090613) 1 NC_009725.1 hypothetical protein 1090613 5460968 RBAM_011110 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420706.1 1090416 R 326423 CDS YP_001420707.1 154685546 5461956 complement(1090613..1090762) 1 NC_009725.1 hypothetical protein 1090762 5461956 RBAM_011120 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420707.1 1090613 R 326423 CDS YP_001420708.1 154685547 5461957 complement(1090848..1091660) 1 NC_009725.1 conserved hypothetical protein YitU; hypothetical protein 1091660 yitU 5461957 yitU Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420708.1 1090848 R 326423 CDS YP_001420709.1 154685548 5461958 1091781..1092548 1 NC_009725.1 conserved hypothetical protein YitV; hypothetical protein 1092548 yitV 5461958 yitV Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420709.1 1091781 D 326423 CDS YP_001420710.1 154685549 5461959 1092611..1092919 1 NC_009725.1 conserved hypothetical protein YitW; hypothetical protein 1092919 yitW 5461959 yitW Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420710.1 1092611 D 326423 CDS YP_001420711.1 154685550 5461960 complement(1093028..1093471) 1 NC_009725.1 catalyzes resistance to fosfomycin by the addition of a thiol cofactor; fosfomycin resistance protein FosB 1093471 fosB 5461960 fosB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 fosfomycin resistance protein FosB YP_001420711.1 1093028 R 326423 CDS YP_001420712.1 154685551 5461961 1093793..1095229 1 NC_009725.1 oxidoreductase YitY; hypothetical protein 1095229 yitY 5461961 yitY Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420712.1 1093793 D 326423 CDS YP_001420713.1 154685552 5462904 1095226..1095768 1 NC_009725.1 multidrug resistance protein YitZ; hypothetical protein 1095768 yitZ 5462904 yitZ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420713.1 1095226 D 326423 CDS YP_001420714.1 154685553 5462905 1095933..1096970 1 NC_009725.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase 1096970 argC 5462905 argC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 N-acetyl-gamma-glutamyl-phosphate reductase YP_001420714.1 1095933 D 326423 CDS YP_001420715.1 154685554 5462906 1096993..1098210 1 NC_009725.1 bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein 1098210 argJ 5462906 argJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein YP_001420715.1 1096993 D 326423 CDS YP_001420716.1 154685555 5462907 1098225..1099001 1 NC_009725.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 1099001 argB 5462907 argB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 acetylglutamate kinase YP_001420716.1 1098225 D 326423 CDS YP_001420717.1 154685556 5462908 1098998..1100155 1 NC_009725.1 acetylornithine aminotransferase ArgD; acetylornithine aminotransferase 1100155 argD 5462908 argD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 acetylornithine aminotransferase YP_001420717.1 1098998 D 326423 CDS YP_001420718.1 154685557 5462909 1100225..1101283 1 NC_009725.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 1101283 carA 5462909 carA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 carbamoyl phosphate synthase small subunit YP_001420718.1 1100225 D 326423 CDS YP_001420719.1 154685558 5460562 1101276..1104371 1 NC_009725.1 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 1104371 carB 5460562 carB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 carbamoyl phosphate synthase large subunit YP_001420719.1 1101276 D 326423 CDS YP_001420720.1 154685559 5460563 1104359..1105330 1 NC_009725.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 1105330 argF 5460563 argF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ornithine carbamoyltransferase YP_001420720.1 1104359 D 326423 CDS YP_001420721.1 154685560 5460564 1105406..1105585 1 NC_009725.1 hypothetical protein YjzC; hypothetical protein 1105585 yjzC 5460564 yjzC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420721.1 1105406 D 326423 CDS YP_001420722.1 154685561 5460565 complement(1105622..1105807) 1 NC_009725.1 hypothetical protein YjzD; hypothetical protein 1105807 yjzD 5460565 yjzD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420722.1 1105622 R 326423 CDS YP_001420723.1 154685562 5460566 1106068..1106802 1 NC_009725.1 hypothetical protein YjaU; hypothetical protein 1106802 yjaU 5460566 yjaU Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420723.1 1106068 D 326423 CDS YP_001420724.1 154685563 5460567 1106885..1107451 1 NC_009725.1 hypothetical protein YjaV; hypothetical protein 1107451 yjaV 5460567 yjaV Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420724.1 1106885 D 326423 CDS YP_001420725.1 154685564 5462757 1107541..1108494 1 NC_009725.1 transcriptional activator protein med precursor Med; hypothetical protein 1108494 med 5462757 med Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420725.1 1107541 D 326423 CDS YP_001420726.1 154685565 5462758 1108507..1108698 1 NC_009725.1 comG operon repressor ComZ; ComZ 1108698 comZ 5462758 comZ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ComZ YP_001420726.1 1108507 D 326423 CDS YP_001420727.1 154685566 5462759 complement(1108727..1108945) 1 NC_009725.1 hypothetical protein YjzB; hypothetical protein 1108945 yjzB 5462759 yjzB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420727.1 1108727 R 326423 CDS YP_001420728.1 154685567 5462760 1109112..1110050 1 NC_009725.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 1110050 fabHA 5462760 fabHA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 3-oxoacyl-ACP synthase YP_001420728.1 1109112 D 326423 CDS YP_001420729.1 154685568 5462761 1110073..1111311 1 NC_009725.1 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase 1111311 fabF 5462761 fabF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 3-oxoacyl-ACP synthase YP_001420729.1 1110073 D 326423 CDS YP_001420730.1 154685569 5462762 1111395..1112180 1 NC_009725.1 conserved hypothetical protein YjaZ; hypothetical protein 1112180 yjaZ 5462762 yjaZ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420730.1 1111395 D 326423 CDS YP_001420731.1 154685570 5459946 1112354..1113340 1 NC_009725.1 oligopeptide transport ATP-binding protein AppD; AppD 1113340 appD 5459946 appD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 AppD YP_001420731.1 1112354 D 326423 CDS YP_001420732.1 154685571 5459947 1113337..1114326 1 NC_009725.1 oligopeptide transport ATP-binding protein AppF; AppF 1114326 appF 5459947 appF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 AppF YP_001420732.1 1113337 D 326423 CDS YP_001420733.1 154685572 5459948 1114404..1116032 1 NC_009725.1 oligopeptide-binding protein AppA precursor; AppA 1116032 appA 5459948 appA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 AppA YP_001420733.1 1114404 D 326423 CDS YP_001420734.1 154685573 5459949 1116099..1117049 1 NC_009725.1 oligopeptide transport system permease protein AppB; AppB 1117049 appB 5459949 appB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 AppB YP_001420734.1 1116099 D 326423 CDS YP_001420735.1 154685574 5459950 1117071..1117985 1 NC_009725.1 oligopeptide transport system permease protein AppC; AppC 1117985 appC 5459950 appC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 AppC YP_001420735.1 1117071 D 326423 CDS YP_001420736.1 154685575 5459951 1118133..1118885 1 NC_009725.1 hypothetical protein YjbA; hypothetical protein 1118885 yjbA 5459951 yjbA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420736.1 1118133 D 326423 CDS YP_001420737.1 154685576 5460946 complement(1118918..1119910) 1 NC_009725.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 1119910 trpS 5460946 trpS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 tryptophanyl-tRNA synthetase YP_001420737.1 1118918 R 326423 CDS YP_001420738.1 154685577 5460947 1120654..1122288 1 NC_009725.1 oligopeptide ABC transporter (binding protein) OppA; hypothetical protein 1122288 oppA 5460947 oppA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420738.1 1120654 D 326423 CDS YP_001420739.1 154685578 5460948 1122395..1123330 1 NC_009725.1 oligopeptide ABC transporter (permease) OppB; hypothetical protein 1123330 oppB 5460948 oppB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420739.1 1122395 D 326423 CDS YP_001420740.1 154685579 5460949 1123334..1124251 1 NC_009725.1 oligopeptide ABC transporter (permease) OppC; hypothetical protein 1124251 oppC 5460949 oppC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420740.1 1123334 D 326423 CDS YP_001420741.1 154685580 5460950 1124264..1125340 1 NC_009725.1 oligopeptide ABC transporter (ATP-binding protein) OppD; OppD 1125340 oppD 5460950 oppD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 OppD YP_001420741.1 1124264 D 326423 CDS YP_001420742.1 154685581 5460951 1125333..1126250 1 NC_009725.1 oligopeptide ABC transporter (ATP-binding protein) OppF; hypothetical protein 1126250 oppF 5460951 oppF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420742.1 1125333 D 326423 CDS YP_001420743.1 154685582 5461950 1126357..1127553 1 NC_009725.1 hypothetical protein 1127553 5461950 RBAM_011480 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420743.1 1126357 D 326423 CDS YP_001420744.1 154685583 5461951 1127662..1128240 1 NC_009725.1 hypothetical protein YjbC; hypothetical protein 1128240 yjbC 5461951 yjbC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420744.1 1127662 D 326423 CDS YP_001420745.1 154685584 5461952 1128419..1128814 1 NC_009725.1 the anti-alpha factor Spx interacts with RNA polymerase alpha subunit C-terminal domain in a region that interacts with the sigma 70 subunit and may interfere with activation of promoters; in Bacillus subtilis this protein is a substrate for ClpXP protease; blocks transcription of the competence regulatory gene encoded by the srf operon; regulates a number of genes involved in thiol homeostasis including trxA and trxB; monomeric member of ArsC family of proteins; does not bind DNA; contains a disulfide bond between C10 and C13 which may sense disulfide stress; transcriptional regulator Spx 1128814 spxA 5461952 spxA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 transcriptional regulator Spx YP_001420745.1 1128419 D 326423 CDS YP_001420746.1 154685585 5461953 complement(1128872..1129528) 1 NC_009725.1 conserved hypothetical protein YjbE; hypothetical protein 1129528 yjbE 5461953 yjbE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420746.1 1128872 R 326423 CDS YP_001420747.1 154685586 5461954 1129804..1130460 1 NC_009725.1 enables recognition and targeting of proteins for proteolysis, involved in negative regulation of competence; adaptor protein 1130460 mecA 5461954 mecA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 adaptor protein YP_001420747.1 1129804 D 326423 CDS YP_001420748.1 154685587 5461955 1130611..1131771 1 NC_009725.1 conserved hypothetical protein YjbF; hypothetical protein 1131771 yjbF 5461955 yjbF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420748.1 1130611 D 326423 CDS YP_001420749.1 154685588 5460969 1131999..1133828 1 NC_009725.1 oligopeptidase F YjbG; hypothetical protein 1133828 yjbG 5460969 yjbG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420749.1 1131999 D 326423 CDS YP_001420750.1 154685589 5460970 complement(1133866..1134033) 1 NC_009725.1 hypothetical protein 1134033 5460970 RBAM_011550 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420750.1 1133866 R 326423 CDS YP_001420751.1 154685590 5460971 complement(1134319..1135221) 1 NC_009725.1 conserved hypothetical protein YjbH; hypothetical protein 1135221 yjbH 5460971 yjbH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420751.1 1134319 R 326423 CDS YP_001420752.1 154685591 5460972 complement(1135218..1135616) 1 NC_009725.1 conserved hypothetical protein YjbI; hypothetical protein 1135616 yjbI 5460972 yjbI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420752.1 1135218 R 326423 CDS YP_001420753.1 154685592 5460973 complement(1135845..1136531) 1 NC_009725.1 lytic transglycosylase YjbJ; hypothetical protein 1136531 yjbJ 5460973 yjbJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420753.1 1135845 R 326423 CDS YP_001420754.1 154685593 5460974 complement(1136536..1137108) 1 NC_009725.1 conserved hypothetical protein YjbK; hypothetical protein 1137108 yjbK 5460974 yjbK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420754.1 1136536 R 326423 CDS YP_001420755.1 154685594 5459889 1137233..1137598 1 NC_009725.1 hypothetical protein YjbL; hypothetical protein 1137598 yjbL 5459889 yjbL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420755.1 1137233 D 326423 CDS YP_001420756.1 154685595 5459890 1137786..1138262 1 NC_009725.1 GTP pyrophosphokinase YjbM; hypothetical protein 1138262 yjbM 5459890 yjbM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420756.1 1137786 D 326423 CDS YP_001420757.1 154685596 5459891 1138280..1139080 1 NC_009725.1 catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase 1139080 ppnK 5459891 ppnK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 inorganic polyphosphate/ATP-NAD kinase YP_001420757.1 1138280 D 326423 CDS YP_001420758.1 154685597 5459892 1139095..1139988 1 NC_009725.1 pseudouridine synthase YjbO; hypothetical protein 1139988 yjbO 5459892 yjbO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420758.1 1139095 D 326423 CDS YP_001420759.1 154685598 5459893 complement(1140022..1140771) 1 NC_009725.1 asymmetrical; catalyzes the formation of NTP and NMP from P(1),P(4)-bis(5'-nucleosyl) tetraphosphate; acts on bis(5'-guanosyl) tetraphosphate, bis(5'-xanthosyl)-tetraphosphate, on bis(5'-adenosyl)-tetraphosphate, and bis(5'-uridyl)-tetraphosphate; bis(5'-nucleosyl)-tetraphosphatase PrpE 1140771 yjbP 5459893 yjbP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 bis(5'-nucleosyl)-tetraphosphatase PrpE YP_001420759.1 1140022 R 326423 CDS YP_001420760.1 154685599 5459894 1141000..1142844 1 NC_009725.1 Na+/H+ antiporter YjbQ; hypothetical protein 1142844 yjbQ 5459894 yjbQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420760.1 1141000 D 326423 CDS YP_001420761.1 154685600 5462514 1143091..1143801 1 NC_009725.1 transcriptional activator TenA; TenA 1143801 tenA 5462514 tenA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 TenA YP_001420761.1 1143091 D 326423 CDS YP_001420762.1 154685601 5462515 1143779..1144396 1 NC_009725.1 regulates the production of extracellular enzymes; transcriptional regulator TenI 1144396 tenI 5462515 tenI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 transcriptional regulator TenI YP_001420762.1 1143779 D 326423 CDS YP_001420763.1 154685602 5462516 1144380..1145489 1 NC_009725.1 glycine oxidase GoxB; GoxB 1145489 goxB 5462516 goxB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GoxB YP_001420763.1 1144380 D 326423 CDS YP_001420764.1 154685603 5462517 1145486..1145689 1 NC_009725.1 hydroxyethylthiazole phosphate biosynthesis (thiamine biosynthesis) ThiS; hypothetical protein 1145689 thiS 5462517 thiS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420764.1 1145486 D 326423 CDS YP_001420765.1 154685604 5462518 1145692..1146456 1 NC_009725.1 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase 1146456 thiG 5462518 thiG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 thiazole synthase YP_001420765.1 1145692 D 326423 CDS YP_001420766.1 154685605 5462519 1146453..1147463 1 NC_009725.1 catalyzes the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD or ThiS in the molybdopterin or thiamin pyrophosphate biosynthesis pathways; thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein 1147463 thiF 5462519 thiF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein YP_001420766.1 1146453 D 326423 CDS YP_001420767.1 154685606 5460162 1147486..1148298 1 NC_009725.1 catalyzes the formation of 4-amino-2-methyl-5-diphosphomethylpyrimidine; phosphomethylpyrimidine kinase 1148298 yjbV 5460162 yjbV Bacillus amyloliquefaciens subsp. plantarum str. FZB42 phosphomethylpyrimidine kinase YP_001420767.1 1147486 D 326423 CDS YP_001420768.1 154685607 5460163 1148429..1149205 1 NC_009725.1 Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-(acyl carrier protein) reductase 1149205 fabI 5460163 fabI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 enoyl-(acyl carrier protein) reductase YP_001420768.1 1148429 D 326423 CDS YP_001420769.1 154685608 5460164 1149303..1149911 1 NC_009725.1 hypothetical protein YjbX; hypothetical protein 1149911 yjbX 5460164 yjbX Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420769.1 1149303 D 326423 CDS YP_001420770.1 154685609 5460165 complement(1149970..1150413) 1 NC_009725.1 spore coat protein CotZ (insoluble fraction) CotZ; CotZ 1150413 cotZ 5460165 cotZ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 CotZ YP_001420770.1 1149970 R 326423 CDS YP_001420771.1 154685610 5460166 complement(1150559..1151041) 1 NC_009725.1 spore coat protein CotY; CotY 1151041 cotY 5460166 cotY Bacillus amyloliquefaciens subsp. plantarum str. FZB42 CotY YP_001420771.1 1150559 R 326423 CDS YP_001420772.1 154685611 5460167 complement(1151192..1151692) 1 NC_009725.1 spore coat protein (insoluble fraction) CotX; CotX 1151692 cotX 5460167 cotX Bacillus amyloliquefaciens subsp. plantarum str. FZB42 CotX YP_001420772.1 1151192 R 326423 CDS YP_001420773.1 154685612 5462040 complement(1151784..1152095) 1 NC_009725.1 spore coat protein (insoluble fraction) CotW; CotW 1152095 cotW 5462040 cotW Bacillus amyloliquefaciens subsp. plantarum str. FZB42 CotW YP_001420773.1 1151784 R 326423 CDS YP_001420774.1 154685613 5462041 complement(1152133..1152519) 1 NC_009725.1 spore coat protein (insoluble fraction) CotV; CotV 1152519 cotV 5462041 cotV Bacillus amyloliquefaciens subsp. plantarum str. FZB42 CotV YP_001420774.1 1152133 R 326423 CDS YP_001420775.1 154685614 5462042 1152672..1153046 1 NC_009725.1 conserved hypothetical protein YjcA; hypothetical protein 1153046 yjcA 5462042 yjcA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420775.1 1152672 D 326423 CDS YP_001420776.1 154685615 5462043 1153333..1153530 1 NC_009725.1 hypothetical protein 1153530 5462043 RBAM_011810 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420776.1 1153333 D 326423 CDS YP_001420777.1 154685616 5462044 1153622..1153783 1 NC_009725.1 hypothetical protein 1153783 5462044 RBAM_011820 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420777.1 1153622 D 326423 CDS YP_001420778.1 154685617 5462045 1153866..1154204 1 NC_009725.1 hypothetical protein YjcC; hypothetical protein 1154204 yjcC 5462045 yjcC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420778.1 1153866 D 326423 CDS YP_001420779.1 154685618 5463105 complement(1154273..1156558) 1 NC_009725.1 ATP-dependent DNA helicase YjcD; hypothetical protein 1156558 yjcD 5463105 yjcD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420779.1 1154273 R 326423 CDS YP_001420780.1 154685619 5463106 1156679..1156933 1 NC_009725.1 hypothetical protein 1156933 5463106 RBAM_011850 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420780.1 1156679 D 326423 CDS YP_001420781.1 154685620 5463107 1157002..1157751 1 NC_009725.1 beta-lactamase II precursor (Penicillinase) (Cephalosporinase) Blm; Blm 1157751 blm 5463107 blm Bacillus amyloliquefaciens subsp. plantarum str. FZB42 Blm YP_001420781.1 1157002 D 326423 CDS YP_001420782.1 154685621 5463108 complement(1157792..1158514) 1 NC_009725.1 ABC-type multidrug transport system, permease 1158514 5463108 RBAM_011870 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ABC-type multidrug transport system, permease YP_001420782.1 1157792 R 326423 CDS YP_001420783.1 154685622 5463109 complement(1158507..1159244) 1 NC_009725.1 ABC transporter ATP-binding protein 1159244 5463109 RBAM_011880 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ABC transporter ATP-binding protein YP_001420783.1 1158507 R 326423 CDS YP_001420784.1 154685623 5463110 complement(1159245..1159478) 1 NC_009725.1 abrB-like protein 1159478 5463110 RBAM_011890 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 abrB-like protein YP_001420784.1 1159245 R 326423 CDS YP_001420785.1 154685624 5463228 complement(1159637..1160068) 1 NC_009725.1 conserved hypothetical protein YjcF; hypothetical protein 1160068 yjcF 5463228 yjcF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420785.1 1159637 R 326423 CDS YP_001420786.1 154685625 5463229 complement(1160073..1160588) 1 NC_009725.1 similar to 2'-5' RNA ligase; hypothetical protein 1160588 yjcG 5463229 yjcG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420786.1 1160073 R 326423 CDS YP_001420787.1 154685626 5463230 complement(1160614..1161336) 1 NC_009725.1 conserved hypothetical protein YcjH; hypothetical protein 1161336 ycjH 5463230 ycjH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420787.1 1160614 R 326423 CDS YP_001420788.1 154685627 5463231 1161706..1162827 1 NC_009725.1 catalyzes the formation of cysteine from cystathionine; in B. subtilis also has O-acetylhomoserine thiolyase activity; cystathionine gamma-synthase 1162827 yjcI 5463231 yjcI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 cystathionine gamma-synthase YP_001420788.1 1161706 D 326423 CDS YP_001420789.1 154685628 5463232 1162820..1163995 1 NC_009725.1 catalyzes the formation of L-homocysteine from cystathionine; cystathionine beta-lyase 1163995 yjcJ 5463232 yjcJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 cystathionine beta-lyase YP_001420789.1 1162820 D 326423 CDS YP_001420790.1 154685629 5461053 complement(1164792..1165289) 1 NC_009725.1 hypothetical protein 1165289 5461053 RBAM_011960 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420790.1 1164792 R 326423 CDS YP_001420791.1 154685630 5461054 complement(1165318..1166676) 1 NC_009725.1 similar to Bacillus subtilis skin element YokI; hypothetical protein 1166676 yokI 5461054 yokI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420791.1 1165318 R 326423 CDS YP_001420792.1 154685631 5461055 complement(1166931..1167185) 1 NC_009725.1 hypothetical protein 1167185 5461055 RBAM_011980 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420792.1 1166931 R 326423 CDS YP_001420793.1 154685632 5461056 1167536..1168522 1 NC_009725.1 hypothetical protein 1168522 5461056 RBAM_011990 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420793.1 1167536 D 326423 CDS YP_001420794.1 154685633 5461057 1168606..1169361 1 NC_009725.1 hypothetical protein 1169361 5461057 RBAM_012000 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420794.1 1168606 D 326423 CDS YP_001420795.1 154685634 5459929 complement(1170419..1170754) 1 NC_009725.1 hypothetical protein 1170754 5459929 RBAM_012010 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420795.1 1170419 R 326423 CDS YP_001420796.1 154685635 5459930 complement(1170776..1172614) 1 NC_009725.1 bacillus subtilis skin element like protein YqcG[bacteriophage SPBc2]; hypothetical protein 1172614 yqcG 5459930 yqcG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420796.1 1170776 R 326423 CDS YP_001420797.1 154685636 5459931 1173175..1173723 1 NC_009725.1 hypothetical protein 1173723 5459931 RBAM_012030 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420797.1 1173175 D 326423 CDS YP_001420798.1 154685637 5459932 1173772..1174002 1 NC_009725.1 hypothetical protein 1174002 5459932 RBAM_012040 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420798.1 1173772 D 326423 CDS YP_001420799.1 154685638 5459933 1174045..1174218 1 NC_009725.1 hypothetical protein 1174218 5459933 RBAM_012050 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420799.1 1174045 D 326423 CDS YP_001420800.1 154685639 5459934 1174249..1174947 1 NC_009725.1 hypothetical protein 1174947 5459934 RBAM_012060 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420800.1 1174249 D 326423 CDS YP_001420801.1 154685640 5460862 1175652..1176014 1 NC_009725.1 hypothetical protein 1176014 5460862 RBAM_012070 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420801.1 1175652 D 326423 CDS YP_001420802.1 154685641 5460863 1176362..1177276 1 NC_009725.1 beta-lactamase precursor PenP; PenP 1177276 penP 5460863 penP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 PenP YP_001420802.1 1176362 D 326423 CDS YP_001420803.1 154685642 5460864 1177377..1177679 1 NC_009725.1 conserved hypothetical protein YjcS; hypothetical protein 1177679 yjcS 5460864 yjcS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420803.1 1177377 D 326423 CDS YP_001420804.1 154685643 5460865 complement(1177779..1179191) 1 NC_009725.1 membrane-bound transport protein YfjF; hypothetical protein 1179191 yfjF 5460865 yfjF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420804.1 1177779 R 326423 CDS YP_001420805.1 154685644 5460866 complement(1179334..1179807) 1 NC_009725.1 MarR family transcriptional regulator 1179807 5460866 RBAM_012110 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 MarR family transcriptional regulator YP_001420805.1 1179334 R 326423 CDS YP_001420806.1 154685645 5460867 complement(1180093..1181205) 1 NC_009725.1 predicted arabinogalactan endo-1,4-beta-galactosidase; GanA 1181205 ganA 5460867 ganA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GanA YP_001420806.1 1180093 R 326423 CDS YP_001420807.1 154685646 5463007 complement(1181257..1182756) 1 NC_009725.1 catalyzes the formation of alpha-D-glucose 1-phosphate and UDP-galactose from UDP-glucose and alpha-D-galactose 1-phosphate in galactose metabolism; galactose-1-phosphate uridylyltransferase 1182756 galT1 5463007 galT1 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 galactose-1-phosphate uridylyltransferase YP_001420807.1 1181257 R 326423 CDS YP_001420808.1 154685647 5463008 complement(1182758..1183750) 1 NC_009725.1 UDP-glucose 4-epimerase; GalE1 1183750 galE1 5463008 galE1 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GalE1 YP_001420808.1 1182758 R 326423 CDS YP_001420809.1 154685648 5463009 complement(1183754..1184923) 1 NC_009725.1 galactokinase; GalK1 1184923 galK1 5463009 galK1 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GalK1 YP_001420809.1 1183754 R 326423 CDS YP_001420810.1 154685649 5463010 complement(1184939..1186636) 1 NC_009725.1 phosphotransferase system (PTS) lichenan-specific enzyme IIA component; LacE 1186636 lacE 5463010 lacE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 LacE YP_001420810.1 1184939 R 326423 CDS YP_001420811.1 154685650 5463011 complement(1186648..1186962) 1 NC_009725.1 phosphotransferase system cellobiose-specific component IIBC; LacF 1186962 lacF 5463011 lacF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 LacF YP_001420811.1 1186648 R 326423 CDS YP_001420812.1 154685651 5463012 complement(1187026..1188426) 1 NC_009725.1 catalyzes the formation of 6-phospho-galactose from a 6-phospho-beta-galactoside; 6-phospho-beta-galactosidase 1188426 lacG 5463012 lacG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 6-phospho-beta-galactosidase YP_001420812.1 1187026 R 326423 CDS YP_001420813.1 154685652 5460526 1188679..1189440 1 NC_009725.1 COG1349; lactose phosphotransferase system repressor protein; LacR 1189440 lacR 5460526 lacR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 LacR YP_001420813.1 1188679 D 326423 CDS YP_001420814.1 154685653 5460527 1189458..1190141 1 NC_009725.1 COG0637; predicted phosphatase/phosphohexomutase; Pgm 1190141 pgm 5460527 pgm Bacillus amyloliquefaciens subsp. plantarum str. FZB42 Pgm YP_001420814.1 1189458 D 326423 CDS YP_001420815.1 154685654 5460528 1190449..1191639 1 NC_009725.1 hypothetical protein 1191639 5460528 RBAM_012210 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420815.1 1190449 D 326423 CDS YP_001420816.1 154685655 5460529 complement(1191882..1192214) 1 NC_009725.1 hypothetical protein 1192214 5460529 RBAM_012220 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420816.1 1191882 R 326423 CDS YP_001420817.1 154685656 5460530 1192317..1192952 1 NC_009725.1 hypothetical protein 1192952 5460530 RBAM_012230 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420817.1 1192317 D 326423 CDS YP_001420818.1 154685657 5460531 complement(1193293..1193466) 1 NC_009725.1 hypothetical protein YjfB; hypothetical protein 1193466 yjfB 5460531 yjfB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420818.1 1193293 R 326423 CDS YP_001420819.1 154685658 5461653 complement(1193510..1193911) 1 NC_009725.1 hypothetical protein YjgA; hypothetical protein 1193911 yjgA 5461653 yjgA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420819.1 1193510 R 326423 CDS YP_001420820.1 154685659 5461654 complement(1194009..1194578) 1 NC_009725.1 hypothetical protein YjgB; hypothetical protein 1194578 yjgB 5461654 yjgB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420820.1 1194009 R 326423 CDS YP_001420821.1 154685660 5461655 1194670..1197660 1 NC_009725.1 formate dehydrogenase alpha subunit YjgC; hypothetical protein 1197660 yjgC 5461655 yjgC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420821.1 1194670 D 326423 CDS YP_001420822.1 154685661 5461656 1197653..1198195 1 NC_009725.1 conserved hypothetical protein YjgD; hypothetical protein 1198195 yjgD 5461656 yjgD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420822.1 1197653 D 326423 CDS YP_001420823.1 154685662 5461657 1198403..1199620 1 NC_009725.1 cytochrome P450 YjiB; hypothetical protein 1199620 yjiB 5461657 yjiB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420823.1 1198403 D 326423 CDS YP_001420824.1 154685663 5461658 1199617..1200804 1 NC_009725.1 macrolide glycosyltransferase YjiC; hypothetical protein 1200804 yjiC 5461658 yjiC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420824.1 1199617 D 326423 CDS YP_001420825.1 154685664 5463050 1201208..1202026 1 NC_009725.1 catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; functions in tetrapyrrole and heme biosynthesis; uroporphyrinogen-III synthase 1202026 hemD 5463050 hemD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 uroporphyrinogen-III synthase YP_001420825.1 1201208 D 326423 CDS YP_001420826.1 154685665 5463051 complement(1202052..1202813) 1 NC_009725.1 conserved hypothetical protein YjkA; hypothetical protein 1202813 yjkA 5463051 yjkA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420826.1 1202052 R 326423 CDS YP_001420827.1 154685666 5463052 complement(1202815..1203564) 1 NC_009725.1 amino acid ABC transporter (ATP-binding protein) YjkB; hypothetical protein 1203564 yjkB 5463052 yjkB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420827.1 1202815 R 326423 CDS YP_001420828.1 154685667 5463053 complement(1203579..1204562) 1 NC_009725.1 hypothetical protein YjlA; hypothetical protein 1204562 yjlA 5463053 yjlA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420828.1 1203579 R 326423 CDS YP_001420829.1 154685668 5463054 1204692..1205189 1 NC_009725.1 conserved hypothetical protein YjlB; hypothetical protein 1205189 yjlB 5463054 yjlB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420829.1 1204692 D 326423 CDS YP_001420830.1 154685669 5463055 1205576..1205992 1 NC_009725.1 conserved hypothetical protein YjlC; hypothetical protein 1205992 yjlC 5463055 yjlC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420830.1 1205576 D 326423 CDS YP_001420831.1 154685670 5461491 1206032..1207210 1 NC_009725.1 NADH dehydrogenase-like protein YjlD; hypothetical protein 1207210 yjlD 5461491 yjlD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420831.1 1206032 D 326423 CDS YP_001420832.1 154685671 5461492 1207397..1208794 1 NC_009725.1 catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate; functions in glucuronic and galacturonic metabolism; glucuronate isomerase 1208794 uxaC 5461492 uxaC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 glucuronate isomerase YP_001420832.1 1207397 D 326423 CDS YP_001420833.1 154685672 5461493 1208819..1210204 1 NC_009725.1 symporter symporter YjmB; hypothetical protein 1210204 yjmB 5461493 yjmB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420833.1 1208819 D 326423 CDS YP_001420834.1 154685673 5461494 1210281..1211279 1 NC_009725.1 transcriptional regulator (LacI family) ExuR; ExuR 1211279 exuR 5461494 exuR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ExuR YP_001420834.1 1210281 D 326423 CDS YP_001420835.1 154685674 5461495 1211355..1212800 1 NC_009725.1 catalyzes the formation of D-tagaturonate from D-altronate; altronate oxidoreductase 1212800 uxaB 5461495 uxaB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 altronate oxidoreductase YP_001420835.1 1211355 D 326423 CDS YP_001420836.1 154685675 5461496 1212797..1214290 1 NC_009725.1 altronate hydrolase UxaA; UxaA 1214290 uxaA 5461496 uxaA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 UxaA YP_001420836.1 1212797 D 326423 CDS YP_001420837.1 154685676 5460168 complement(1214324..1215088) 1 NC_009725.1 conserved hypothetical protein YjnA; hypothetical protein 1215088 yjnA 5460168 yjnA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420837.1 1214324 R 326423 CDS YP_001420838.1 154685677 5460169 complement(1215233..1215700) 1 NC_009725.1 conserved hypothetical protein YjoA; hypothetical protein 1215700 yjoA 5460169 yjoA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420838.1 1215233 R 326423 CDS YP_001420839.1 154685678 5460170 1215912..1217042 1 NC_009725.1 response regulator aspartate phosphatase; cd00189, TPR, tetratricopeptide repeat domain; prevents sporulation by dephosphorylating Spo0F-P (and thus the phosphorelay); RapA 1217042 rapA 5460170 rapA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 RapA YP_001420839.1 1215912 D 326423 CDS YP_001420840.1 154685679 5460171 1217032..1217166 1 NC_009725.1 quorum sensing peptide; phosphatase rapA inhibitor; PhrA 1217166 phrA 5460171 phrA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 PhrA YP_001420840.1 1217032 D 326423 CDS YP_001420841.1 154685680 5460172 1217309..1218262 1 NC_009725.1 N-acetylmuramoyl-L-alanine amidase XlyB; XlyB 1218262 xlyB 5460172 xlyB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 XlyB YP_001420841.1 1217309 D 326423 CDS YP_001420842.1 154685681 5460173 complement(1218300..1218677) 1 NC_009725.1 hypothetical protein YjqA; hypothetical protein 1218677 yjqA 5460173 yjqA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420842.1 1218300 R 326423 CDS YP_001420843.1 154685682 5462231 1218788..1219393 1 NC_009725.1 phage-related replication protein YjqB; hypothetical protein 1219393 yjqB 5462231 yjqB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420843.1 1218788 D 326423 CDS YP_001420844.1 154685683 5462232 complement(1219512..1220102) 1 NC_009725.1 phage-like element PBSX protein XkdA; hypothetical protein 1220102 xkdA 5462232 xkdA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420844.1 1219512 R 326423 CDS YP_001420845.1 154685684 5462233 complement(1220251..1220589) 1 NC_009725.1 transcriptional regulator of PBSX genes Xre; XRE family transcriptional regulator 1220589 xre 5462233 xre Bacillus amyloliquefaciens subsp. plantarum str. FZB42 XRE family transcriptional regulator YP_001420845.1 1220251 R 326423 CDS YP_001420846.1 154685685 5462234 1220780..1220959 1 NC_009725.1 hypothetical protein 1220959 5462234 RBAM_012520 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420846.1 1220780 D 326423 CDS YP_001420847.1 154685686 5462235 1221133..1221777 1 NC_009725.1 PBSX prophage protein XkdB; XkdB 1221777 xkdB 5462235 xkdB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 XkdB YP_001420847.1 1221133 D 326423 CDS YP_001420848.1 154685687 5462236 1221677..1222477 1 NC_009725.1 PBSX prophage protein XkdC; hypothetical protein 1222477 xkdC 5462236 xkdC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420848.1 1221677 D 326423 CDS YP_001420849.1 154685688 5461933 1222477..1222644 1 NC_009725.1 hypothetical protein 1222644 5461933 RBAM_012550 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420849.1 1222477 D 326423 CDS YP_001420850.1 154685689 5461934 1222742..1223083 1 NC_009725.1 PBSX prophage protein XkdD; XkdD 1223083 xkdD 5461934 xkdD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 XkdD YP_001420850.1 1222742 D 326423 CDS YP_001420851.1 154685690 5461935 1223073..1223276 1 NC_009725.1 phage-like element PBSX protein XtrA; XtrA 1223276 xtrA 5461935 xtrA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 XtrA YP_001420851.1 1223073 D 326423 CDS YP_001420852.1 154685691 5461936 1223390..1223902 1 NC_009725.1 Positive regulatory protein that acts at the late promoter PL; positive control sigma-like factor 1223902 xpf 5461936 xpf Bacillus amyloliquefaciens subsp. plantarum str. FZB42 positive control sigma-like factor YP_001420852.1 1223390 D 326423 CDS YP_001420853.1 154685692 5461937 1224015..1224248 1 NC_009725.1 PBSX phage terminase small subunit XtmA; XtmA 1224248 xtmA 5461937 xtmA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 XtmA YP_001420853.1 1224015 D 326423 CDS YP_001420854.1 154685693 5461938 1224264..1225112 1 NC_009725.1 hypothetical phage related protein YomR; hypothetical protein 1225112 yomR 5461938 yomR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420854.1 1224264 D 326423 CDS YP_001420855.1 154685694 5460750 1225125..1225496 1 NC_009725.1 hypothetical phage protein YomQ; hypothetical protein 1225496 yomQ 5460750 yomQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420855.1 1225125 D 326423 CDS YP_001420856.1 154685695 5460751 1225501..1225698 1 NC_009725.1 phage-like element PBSX protein XkdX; XkdX 1225698 xkdX 5460751 xkdX Bacillus amyloliquefaciens subsp. plantarum str. FZB42 XkdX YP_001420856.1 1225501 D 326423 CDS YP_001420857.1 154685696 5460752 1225755..1226516 1 NC_009725.1 phage-like element PBSX protein XepA; XepA 1226516 xepA 5460752 xepA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 XepA YP_001420857.1 1225755 D 326423 CDS YP_001420858.1 154685697 5460753 1226568..1226831 1 NC_009725.1 phage-like element PBSX protein XhlA; XhlA 1226831 xhlA 5460753 xhlA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 XhlA YP_001420858.1 1226568 D 326423 CDS YP_001420859.1 154685698 5460754 1226845..1227108 1 NC_009725.1 phage lysis protein holin XhlB; XhlB 1227108 xhlB 5460754 xhlB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 XhlB YP_001420859.1 1226845 D 326423 CDS YP_001420860.1 154685699 5460755 1227122..1228000 1 NC_009725.1 N-acetylmuramoyl-L-alanine amidase XlyA precursor (cell wall hydrolase) (Autolysin); XlyA 1228000 xlyA 5460755 xlyA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 XlyA YP_001420860.1 1227122 D 326423 CDS YP_001420861.1 154685700 5461881 complement(1228256..1228426) 1 NC_009725.1 stage II sporulation protein SB (Antidote protein) SpoIISB; SpoIISB 1228426 spoIISB 5461881 spoIISB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SpoIISB YP_001420861.1 1228256 R 326423 CDS YP_001420862.1 154685701 5461882 complement(1228427..1229173) 1 NC_009725.1 stage II sporulation protein SA (Killer protein) SpoIISA; SpoIISA 1229173 spoIISA 5461882 spoIISA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SpoIISA YP_001420862.1 1228427 R 326423 CDS YP_001420863.1 154685702 5461883 complement(1229278..1230276) 1 NC_009725.1 low-affinity inorganic phosphate transporter Pit; Pit 1230276 pit 5461883 pit Bacillus amyloliquefaciens subsp. plantarum str. FZB42 Pit YP_001420863.1 1229278 R 326423 CDS YP_001420864.1 154685703 5461884 complement(1230289..1230906) 1 NC_009725.1 conserved hypothetical protein YkaA; hypothetical protein 1230906 ykaA 5461884 ykaA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420864.1 1230289 R 326423 CDS YP_001420865.1 154685704 5461885 complement(1231192..1232508) 1 NC_009725.1 amino acid permease YkbA; hypothetical protein 1232508 ykbA 5461885 ykbA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420865.1 1231192 R 326423 CDS YP_001420866.1 154685705 5461886 1232831..1233781 1 NC_009725.1 conserved hypothetical protein YkcA; hypothetical protein 1233781 ykcA 5461886 ykcA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420866.1 1232831 D 326423 CDS YP_001420867.1 154685706 5459741 1233965..1236106 1 NC_009725.1 conserved hypothetical protein YkcB; hypothetical protein 1236106 ykcB 5459741 ykcB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420867.1 1233965 D 326423 CDS YP_001420868.1 154685707 5459742 1236118..1237089 1 NC_009725.1 glycosyl transferase YkcC; hypothetical protein 1237089 ykcC 5459742 ykcC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420868.1 1236118 D 326423 CDS YP_001420869.1 154685708 5459743 complement(1237407..1238759) 1 NC_009725.1 serine protease do-like HtrA; hypothetical protein 1238759 htrA 5459743 htrA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420869.1 1237407 R 326423 CDS YP_001420870.1 154685709 5459744 1239044..1240603 1 NC_009725.1 conserved hypothetical protein YubD; hypothetical protein 1240603 yubD 5459744 yubD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420870.1 1239044 D 326423 CDS YP_001420871.1 154685710 5459745 1240759..1241583 1 NC_009725.1 D-aminopeptidase DppA; hypothetical protein 1241583 dppA 5459745 dppA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420871.1 1240759 D 326423 CDS YP_001420872.1 154685711 5459746 1241598..1242524 1 NC_009725.1 dipeptide transport system permease protein DppB; hypothetical protein 1242524 dppB 5459746 dppB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420872.1 1241598 D 326423 CDS YP_001420873.1 154685712 5463099 1242530..1243477 1 NC_009725.1 dipeptide transport system permease protein DppC; hypothetical protein 1243477 dppC 5463099 dppC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420873.1 1242530 D 326423 CDS YP_001420874.1 154685713 5463100 1243483..1244511 1 NC_009725.1 dipeptide transport ATP-binding protein DppD; hypothetical protein 1244511 dppD 5463100 dppD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420874.1 1243483 D 326423 CDS YP_001420875.1 154685714 5463101 1244508..1246127 1 NC_009725.1 dipeptide-binding protein DppE precursor; DppE 1246127 dppE 5463101 dppE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DppE YP_001420875.1 1244508 D 326423 CDS YP_001420876.1 154685715 5463102 1246215..1247150 1 NC_009725.1 conserved hypothetical protein YkfA; hypothetical protein 1247150 ykfA 5463102 ykfA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420876.1 1246215 D 326423 CDS YP_001420877.1 154685716 5463103 1247157..1248254 1 NC_009725.1 chloromuconate cycloisomerase YkfB; hypothetical protein 1248254 ykfB 5463103 ykfB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420877.1 1247157 D 326423 CDS YP_001420878.1 154685717 5463104 1248251..1249150 1 NC_009725.1 polysugar degrading enzyme YkfC; hypothetical protein 1249150 ykfC 5463104 ykfC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420878.1 1248251 D 326423 CDS YP_001420879.1 154685718 5462850 1249154..1250125 1 NC_009725.1 oligopeptide ABC transporter (ATPase component)YkfD; hypothetical protein 1250125 ykfD 5462850 ykfD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420879.1 1249154 D 326423 CDS YP_001420880.1 154685719 5462851 complement(1250153..1251202) 1 NC_009725.1 conserved hypothetical protein YkgB; hypothetical protein 1251202 ykgB 5462851 ykgB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420880.1 1250153 R 326423 CDS YP_001420881.1 154685720 5462852 complement(1251273..1252133) 1 NC_009725.1 conserved hypothetical protein YkgA; hypothetical protein 1252133 ykgA 5462852 ykgA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420881.1 1251273 R 326423 CDS YP_001420882.1 154685721 5462853 1252323..1252841 1 NC_009725.1 acyl-CoA thioester hydrolase YkhA; hypothetical protein 1252841 ykhA 5462853 ykhA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420882.1 1252323 D 326423 CDS YP_001420883.1 154685722 5462854 1252941..1253486 1 NC_009725.1 conserved hypothetical protein YkkB; hypothetical protein 1253486 ykkB 5462854 ykkB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420883.1 1252941 D 326423 CDS YP_001420884.1 154685723 5462855 1253674..1254012 1 NC_009725.1 Multidrug resistance protein YkkC; hypothetical protein 1254012 ykkC 5462855 ykkC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420884.1 1253674 D 326423 CDS YP_001420885.1 154685724 5460431 1254012..1254326 1 NC_009725.1 Multidrug resistance protein YkkD; hypothetical protein 1254326 ykkD 5460431 ykkD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420885.1 1254012 D 326423 CDS YP_001420886.1 154685725 5460432 1254401..1255303 1 NC_009725.1 produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase 1255303 purU 5460432 purU Bacillus amyloliquefaciens subsp. plantarum str. FZB42 formyltetrahydrofolate deformylase YP_001420886.1 1254401 D 326423 CDS YP_001420887.1 154685726 5460433 1255673..1256785 1 NC_009725.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 1256785 proB 5460433 proB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 gamma-glutamyl kinase YP_001420887.1 1255673 D 326423 CDS YP_001420888.1 154685727 5460434 1256782..1258029 1 NC_009725.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 1258029 proA 5460434 proA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 gamma-glutamyl phosphate reductase YP_001420888.1 1256782 D 326423 CDS YP_001420889.1 154685728 5460435 1258142..1258567 1 NC_009725.1 organic hydroperoxide resistance protein OhrA; OhrA 1258567 ohrA 5460435 ohrA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 OhrA YP_001420889.1 1258142 D 326423 CDS YP_001420890.1 154685729 5460436 complement(1258595..1259104) 1 NC_009725.1 organic hydroperoxide resistance transcriptionalregulator OhrR; OhrR 1259104 ohrR 5460436 ohrR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 OhrR YP_001420890.1 1258595 R 326423 CDS YP_001420891.1 154685730 5462004 1259178..1259588 1 NC_009725.1 organic hydroperoxide resistance protein (general stress protein 17o) (Gsp17o) OhrB; OhrB 1259588 ohrB 5462004 ohrB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 OhrB YP_001420891.1 1259178 D 326423 CDS YP_001420892.1 154685731 5462005 1259729..1260313 1 NC_009725.1 hypothetical protein 1260313 5462005 RBAM_012980 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420892.1 1259729 D 326423 CDS YP_001420893.1 154685732 5462006 1260335..1260796 1 NC_009725.1 hypothetical protein 1260796 5462006 RBAM_012990 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420893.1 1260335 D 326423 CDS YP_001420894.1 154685733 5462007 1260801..1261928 1 NC_009725.1 hypothetical protein 1261928 5462007 RBAM_013000 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420894.1 1260801 D 326423 CDS YP_001420895.1 154685734 5462008 complement(1261949..1263046) 1 NC_009725.1 hypothetical protein 1263046 5462008 RBAM_013010 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420895.1 1261949 R 326423 CDS YP_001420896.1 154685735 5462009 complement(1263318..1264502) 1 NC_009725.1 hypothetical protein 1264502 5462009 RBAM_013020 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420896.1 1263318 R 326423 CDS YP_001420897.1 154685736 5461875 1264584..1265255 1 NC_009725.1 activator of nucleoside metabolism; DNA-binding transcriptional activator YeiL 1265255 5461875 RBAM_013030 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DNA-binding transcriptional activator YeiL YP_001420897.1 1264584 D 326423 CDS YP_001420898.1 154685737 5461876 complement(1265303..1267591) 1 NC_009725.1 catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase 1267591 metE 5461876 metE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase YP_001420898.1 1265303 R 326423 CDS YP_001420899.1 154685738 5461877 complement(1267969..1268928) 1 NC_009725.1 major intracellular serine protease precursor (ISP-1) IspA; hypothetical protein 1268928 ispA 5461877 ispA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420899.1 1267969 R 326423 CDS YP_001420900.1 154685739 5461878 1269148..1269981 1 NC_009725.1 sigma-H activator YkoB; hypothetical protein 1269981 ykoB 5461878 ykoB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420900.1 1269148 D 326423 CDS YP_001420901.1 154685740 5461879 complement(1270027..1270788) 1 NC_009725.1 conserved hypothetical protein YkoC; hypothetical protein 1270788 ykoC 5461879 ykoC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420901.1 1270027 R 326423 CDS YP_001420902.1 154685741 5461880 complement(1270763..1272400) 1 NC_009725.1 cation ABC transporter (ATP-binding protein) YkoD; hypothetical protein 1272400 ykoD 5461880 ykoD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420902.1 1270763 R 326423 CDS YP_001420903.1 154685742 5460485 complement(1272387..1272986) 1 NC_009725.1 conserved hypothetical protein YkoE; hypothetical protein 1272986 ykoE 5460485 ykoE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420903.1 1272387 R 326423 CDS YP_001420904.1 154685743 5460486 1273427..1274689 1 NC_009725.1 conserved hypothetical protein YdhD; hypothetical protein 1274689 ydhD 5460486 ydhD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420904.1 1273427 D 326423 CDS YP_001420905.1 154685744 5460487 1274778..1274915 1 NC_009725.1 hypothetical protein YkzD; hypothetical protein 1274915 ykzD 5460487 ykzD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420905.1 1274778 D 326423 CDS YP_001420906.1 154685745 5460488 1275422..1276777 1 NC_009725.1 divalent cation transporter YkoK; Mg2+ transporter 1276777 ykoK 5460488 ykoK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 Mg2+ transporter YP_001420906.1 1275422 D 326423 CDS YP_001420907.1 154685746 5460489 complement(1276813..1277145) 1 NC_009725.1 HTH-type transcriptional regulator TnrA; TnrA 1277145 tnrA 5460489 tnrA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 TnrA YP_001420907.1 1276813 R 326423 CDS YP_001420908.1 154685747 5460490 1277340..1277495 1 NC_009725.1 hypothetical protein YkzB; hypothetical protein 1277495 ykzB 5460490 ykzB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420908.1 1277340 D 326423 CDS YP_001420909.1 154685748 5459645 1277584..1277766 1 NC_009725.1 stress response protein YkoL; hypothetical protein 1277766 ykoL 5459645 ykoL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420909.1 1277584 D 326423 CDS YP_001420910.1 154685749 5459646 1277909..1278373 1 NC_009725.1 transcriptional regulator (MarR family)YkoM; hypothetical protein 1278373 ykoM 5459646 ykoM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420910.1 1277909 D 326423 CDS YP_001420911.1 154685750 5459647 1278552..1279106 1 NC_009725.1 hypothetical protein YkoP; hypothetical protein 1279106 ykoP 5459647 ykoP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420911.1 1278552 D 326423 CDS YP_001420912.1 154685751 5459648 complement(1279116..1280951) 1 NC_009725.1 catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA; ATP-dependent DNA ligase 1280951 ligD 5459648 ligD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ATP-dependent DNA ligase YP_001420912.1 1279116 R 326423 CDS YP_001420913.1 154685752 5459649 complement(1280954..1281835) 1 NC_009725.1 conserved hypothetical protein YkoV; hypothetical protein 1281835 ykoV 5459649 ykoV Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420913.1 1280954 R 326423 CDS YP_001420914.1 154685753 5459650 1282463..1283032 1 NC_009725.1 alkaline phosphatase YkoX; hypothetical protein 1283032 ykoX 5459650 ykoX Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420914.1 1282463 D 326423 CDS YP_001420915.1 154685754 5460337 1283248..1284060 1 NC_009725.1 toxic anion resistance protein YkoY; hypothetical protein 1284060 ykoY 5460337 ykoY Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420915.1 1283248 D 326423 CDS YP_001420916.1 154685755 5460338 1284346..1285092 1 NC_009725.1 Heat shock-induced; RNA polymerase sigma factor SigI 1285092 sigI 5460338 sigI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 RNA polymerase sigma factor SigI YP_001420916.1 1284346 D 326423 CDS YP_001420917.1 154685756 5460339 1285089..1286258 1 NC_009725.1 hypothetical protein YkrI; hypothetical protein 1286258 ykrI 5460339 ykrI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420917.1 1285089 D 326423 CDS YP_001420918.1 154685757 5460340 complement(1286265..1286459) 1 NC_009725.1 small acid-soluble spore protein (alpha/beta-type SASP) SspD; SspD 1286459 sspD 5460340 sspD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SspD YP_001420918.1 1286265 R 326423 CDS YP_001420919.1 154685758 5460341 complement(1286595..1287296) 1 NC_009725.1 hypothetical protein YkrK; hypothetical protein 1287296 ykrK 5460341 ykrK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420919.1 1286595 R 326423 CDS YP_001420920.1 154685759 5460342 1287445..1288338 1 NC_009725.1 metalloprotease; heat shock protein HtpX 1288338 ykrL 5460342 ykrL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 heat shock protein HtpX YP_001420920.1 1287445 D 326423 CDS YP_001420921.1 154685760 5462844 1288497..1289849 1 NC_009725.1 transporter (membrane component) YkrM; hypothetical protein 1289849 ykrM 5462844 ykrM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420921.1 1288497 D 326423 CDS YP_001420922.1 154685761 5462845 1289944..1290618 1 NC_009725.1 hypothetical protein 1290618 5462845 RBAM_013280 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420922.1 1289944 D 326423 CDS YP_001420923.1 154685762 5462846 1290620..1290790 1 NC_009725.1 hypothetical protein YkzE; hypothetical protein 1290790 ykzE 5462846 ykzE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420923.1 1290620 D 326423 CDS YP_001420924.1 154685763 5462847 complement(1290831..1291853) 1 NC_009725.1 conserved hypothetical protein YkrP; hypothetical protein 1291853 ykrP 5462847 ykrP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420924.1 1290831 R 326423 CDS YP_001420925.1 154685764 5462848 1292109..1294328 1 NC_009725.1 two-component sensor histidine kinase homolog KinE; KinE 1294328 kinE 5462848 kinE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 KinE YP_001420925.1 1292109 D 326423 CDS YP_001420926.1 154685765 5462849 1294325..1294822 1 NC_009725.1 methylated-DNA--protein-cysteine methyltransferase Ogt; Ogt 1294822 ogt 5462849 ogt Bacillus amyloliquefaciens subsp. plantarum str. FZB42 Ogt YP_001420926.1 1294325 D 326423 CDS YP_001420927.1 154685766 5462386 complement(1295064..1296125) 1 NC_009725.1 isomerizes methylthioribose-1-phosphate into methylthioribulose-1-phosphate; involved in methionine salvage pathway; methylthioribose-1-phosphate isomerase 1296125 mtnA 5462386 mtnA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 methylthioribose-1-phosphate isomerase YP_001420927.1 1295064 R 326423 CDS YP_001420928.1 154685767 5462387 complement(1296132..1297316) 1 NC_009725.1 phosphorylates methylthioribose to form methylthioribose-1-phosphate; involved in methionine salvage pathway; methylthioribose kinase 1297316 mtnK 5462387 mtnK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 methylthioribose kinase YP_001420928.1 1296132 R 326423 CDS YP_001420929.1 154685768 5462388 complement(1297673..1298452) 1 NC_009725.1 conserved hypothetical protein YkrU; hypothetical protein 1298452 ykrU 5462388 ykrU Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420929.1 1297673 R 326423 CDS YP_001420930.1 154685769 5462389 1298544..1299740 1 NC_009725.1 produces methionine from 2-keto-4-methylthiobutyrate and glutamine in vitro; mutations do not affect methionine salvage in vivo however; transaminase 1299740 mtnE 5462389 mtnE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 transaminase YP_001420930.1 1298544 D 326423 CDS YP_001420931.1 154685770 5462390 1299931..1301172 1 NC_009725.1 converts 2,3-diketo-5-methylthiopentyl-1-phosphate into 2-hydroxy 3-keto-5-methylthiopentenyl-1-phosphate; involved in methionine salvage; 2,3-diketo-5-methylthiopentyl-1-phosphate enolase 1301172 mtnW 5462390 mtnW Bacillus amyloliquefaciens subsp. plantarum str. FZB42 2,3-diketo-5-methylthiopentyl-1-phosphate enolase YP_001420931.1 1299931 D 326423 CDS YP_001420932.1 154685771 5462391 1301169..1301873 1 NC_009725.1 converts 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate to 1,2-dihydroxy-3-keto-5-methylthiopentene; involved in methionine salvage; 2-hydroxy-3-keto-5-methylthiopentenyl-1- phosphate phosphatase 1301873 mtnX 5462391 mtnX Bacillus amyloliquefaciens subsp. plantarum str. FZB42 2-hydroxy-3-keto-5-methylthiopentenyl-1- phosphate phosphatase YP_001420932.1 1301169 D 326423 CDS YP_001420933.1 154685772 5461546 1301831..1302460 1 NC_009725.1 converts methylthioribulose-1-phosphate into 2,3-diketo-5-methylthiopentyl-1-phosphate; involved in methionine salvage; methylthioribulose-1-phosphate dehydratase 1302460 mtnB 5461546 mtnB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 methylthioribulose-1-phosphate dehydratase YP_001420933.1 1301831 D 326423 CDS YP_001420934.1 154685773 5461547 1302476..1303012 1 NC_009725.1 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase MtnD; MtnD 1303012 mtnD 5461547 mtnD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 MtnD YP_001420934.1 1302476 D 326423 CDS YP_001420935.1 154685774 5461548 1303293..1303553 1 NC_009725.1 stage 0 sporulation regulatory protein Spo0E; Spo0E 1303553 spo0E 5461548 spo0E Bacillus amyloliquefaciens subsp. plantarum str. FZB42 Spo0E YP_001420935.1 1303293 D 326423 CDS YP_001420936.1 154685775 5461549 complement(1303764..1305263) 1 NC_009725.1 two-component sensor histidine kinase KinD; KinD 1305263 kinD 5461549 kinD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 KinD YP_001420936.1 1303764 R 326423 CDS YP_001420937.1 154685776 5461550 1305480..1305926 1 NC_009725.1 transcription regulator MarR family homolog YkvE; hypothetical protein 1305926 ykvE 5461550 ykvE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420937.1 1305480 D 326423 CDS YP_001420938.1 154685777 5461551 complement(1305962..1306747) 1 NC_009725.1 with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotB 1306747 motB 5461551 motB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 flagellar motor protein MotB YP_001420938.1 1305962 R 326423 CDS YP_001420939.1 154685778 5461746 complement(1306719..1307534) 1 NC_009725.1 With Mot B forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine.; flagellar motor protein MotA 1307534 motA 5461746 motA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 flagellar motor protein MotA YP_001420939.1 1306719 R 326423 CDS YP_001420940.1 154685779 5461747 complement(1307704..1309800) 1 NC_009725.1 ATP-dependent Clp protease-like (class III stress gene) ClpE; ClpE 1309800 clpE 5461747 clpE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ClpE YP_001420940.1 1307704 R 326423 CDS YP_001420941.1 154685780 5461748 1310202..1311239 1 NC_009725.1 conserved hypothetical protein YkvI; hypothetical protein 1311239 ykvI 5461748 ykvI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420941.1 1310202 D 326423 CDS YP_001420942.1 154685781 5461749 1311337..1312458 1 NC_009725.1 hypothetical protein 1312458 5461749 RBAM_013480 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420942.1 1311337 D 326423 CDS YP_001420943.1 154685782 5461750 1312621..1313367 1 NC_009725.1 conserved hypothetical protein YkvJ; hypothetical protein 1313367 ykvJ 5461750 ykvJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420943.1 1312621 D 326423 CDS YP_001420944.1 154685783 5461751 1313368..1313811 1 NC_009725.1 6-pyruvoyl tetrahydrobiopterin synthase homolog YkvK; hypothetical protein 1313811 ykvK 5461751 ykvK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420944.1 1313368 D 326423 CDS YP_001420945.1 154685784 5462868 1313804..1314535 1 NC_009725.1 conserved hypothetical protein YkvL; hypothetical protein 1314535 ykvL 5462868 ykvL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420945.1 1313804 D 326423 CDS YP_001420946.1 154685785 5462869 1314553..1315047 1 NC_009725.1 NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 1315047 ykvM 5462869 ykvM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 7-cyano-7-deazaguanine reductase YP_001420946.1 1314553 D 326423 CDS YP_001420947.1 154685786 5462870 complement(1315624..1315965) 1 NC_009725.1 conserved hypothetical protein YkvN; hypothetical protein 1315965 ykvN 5462870 ykvN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420947.1 1315624 R 326423 CDS YP_001420948.1 154685787 5462871 1316134..1316880 1 NC_009725.1 conserved hypothetical protein YkvO; hypothetical protein 1316880 ykvO 5462871 ykvO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420948.1 1316134 D 326423 CDS YP_001420949.1 154685788 5462872 1317001..1317228 1 NC_009725.1 hypothetical protein 1317228 5462872 RBAM_013550 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420949.1 1317001 D 326423 CDS YP_001420950.1 154685789 5462873 1317578..1317853 1 NC_009725.1 hypothetical protein YkvR; hypothetical protein 1317853 ykvR 5462873 ykvR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420950.1 1317578 D 326423 CDS YP_001420951.1 154685790 5460418 complement(1317925..1318110) 1 NC_009725.1 hypothetical protein 1318110 5460418 RBAM_013570 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420951.1 1317925 R 326423 CDS YP_001420952.1 154685791 5460419 1318274..1318468 1 NC_009725.1 hypothetical protein 1318468 5460419 RBAM_013580 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420952.1 1318274 D 326423 CDS YP_001420953.1 154685792 5460420 1318743..1319366 1 NC_009725.1 spore cortex-lytic enzyme YkvT; hypothetical protein 1319366 ykvT 5460420 ykvT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420953.1 1318743 D 326423 CDS YP_001420954.1 154685793 5460421 1319482..1320822 1 NC_009725.1 sporulation protein YkvU; hypothetical protein 1320822 ykvU 5460421 ykvU Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420954.1 1319482 D 326423 CDS YP_001420955.1 154685794 5460422 1320885..1321379 1 NC_009725.1 sporulation thiol-disulfide oxidoreductase A precursor StoA; StoA 1321379 stoA 5460422 stoA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 StoA YP_001420955.1 1320885 D 326423 CDS YP_001420956.1 154685795 5460423 1321622..1323535 1 NC_009725.1 cation transport ATPase YkvW; hypothetical protein 1323535 ykvW 5460423 ykvW Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420956.1 1321622 D 326423 CDS YP_001420957.1 154685796 5461939 1323649..1324743 1 NC_009725.1 conserved hypothetical protein YkvY; hypothetical protein 1324743 ykvY 5461939 ykvY Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420957.1 1323649 D 326423 CDS YP_001420958.1 154685797 5461940 1325026..1325991 1 NC_009725.1 HTH-type transcriptional regulator YkvZ; hypothetical protein 1325991 ykvZ 5461940 ykvZ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420958.1 1325026 D 326423 CDS YP_001420959.1 154685798 5461941 1326042..1326908 1 NC_009725.1 transcriptional antiterminator (BglG family) GlcT; GlcT 1326908 glcT 5461941 glcT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GlcT YP_001420959.1 1326042 D 326423 CDS YP_001420960.1 154685799 5461942 1327139..1329235 1 NC_009725.1 phosphotransferase system (PTS) glucose-specificenzyme IICBA component PtsG; hypothetical protein 1329235 ptsG 5461942 ptsG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420960.1 1327139 D 326423 CDS YP_001420961.1 154685800 5461943 1329332..1329598 1 NC_009725.1 phosphocarrier protein HPr component PtsH; phosphocarrier protein HPr 1329598 ptsH 5461943 ptsH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 phosphocarrier protein HPr YP_001420961.1 1329332 D 326423 CDS YP_001420962.1 154685801 5461944 1329598..1331313 1 NC_009725.1 phosphoenolpyruvate-protein phosphotransferase PtsI; PtsI 1331313 ptsI 5461944 ptsI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 PtsI YP_001420962.1 1329598 D 326423 CDS YP_001420963.1 154685802 5462945 1331401..1331640 1 NC_009725.1 transcriptional regulator SplA; SplA 1331640 splA 5462945 splA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SplA YP_001420963.1 1331401 D 326423 CDS YP_001420964.1 154685803 5462946 1331725..1332753 1 NC_009725.1 spore photoproduct lyase SpIB; SpIB 1332753 spIB 5462946 spIB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SpIB YP_001420964.1 1331725 D 326423 CDS YP_001420965.1 154685804 5462947 1332880..1334847 1 NC_009725.1 methyl-accepting chemotaxis protein McpC; McpC 1334847 mcpC 5462947 mcpC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 McpC YP_001420965.1 1332880 D 326423 CDS YP_001420966.1 154685805 5462948 1334929..1335795 1 NC_009725.1 hypothetical oxidoreductase YkwC; hypothetical protein 1335795 ykwC 5462948 ykwC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420966.1 1334929 D 326423 CDS YP_001420967.1 154685806 5462949 complement(1336046..1336330) 1 NC_009725.1 hypothetical protein 1336330 5462949 RBAM_013730 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420967.1 1336046 R 326423 CDS YP_001420968.1 154685807 5462950 complement(1336349..1336738) 1 NC_009725.1 hypothetical protein 1336738 5462950 RBAM_013740 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420968.1 1336349 R 326423 CDS YP_001420969.1 154685808 5459970 complement(1337126..1337911) 1 NC_009725.1 conserved hypothetical protein YkwD; hypothetical protein 1337911 ykwD 5459970 ykwD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420969.1 1337126 R 326423 CDS YP_001420970.1 154685809 5459971 1338247..1340379 1 NC_009725.1 penicillin-binding protein dimerisationdomain YkuA; hypothetical protein 1340379 ykuA 5459971 ykuA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420970.1 1338247 D 326423 CDS YP_001420971.1 154685810 5459972 1340557..1341969 1 NC_009725.1 sporulation kinase A (stage II sporulation protein J) KinA; KinA 1341969 kinA 5459972 kinA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 KinA YP_001420971.1 1340557 D 326423 CDS YP_001420972.1 154685811 5459973 complement(1342400..1343560) 1 NC_009725.1 aminotransferase PatA; aminotransferase 1343560 patA 5459973 patA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 aminotransferase YP_001420972.1 1342400 R 326423 CDS YP_001420973.1 154685812 5459974 complement(1343770..1343931) 1 NC_009725.1 hypothetical protein 1343931 5459974 RBAM_013790 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420973.1 1343770 R 326423 CDS YP_001420974.1 154685813 5459975 1344120..1345031 1 NC_009725.1 chemotaxis protein CheV; CheV 1345031 cheV 5459975 cheV Bacillus amyloliquefaciens subsp. plantarum str. FZB42 CheV YP_001420974.1 1344120 D 326423 CDS YP_001420975.1 154685814 5463088 complement(1345075..1345539) 1 NC_009725.1 hypothetical protein YkyB; hypothetical protein 1345539 ykyB 5463088 ykyB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420975.1 1345075 R 326423 CDS YP_001420976.1 154685815 5463089 complement(1345662..1346954) 1 NC_009725.1 hypothetical protein YkuC; hypothetical protein 1346954 ykuC 5463089 ykuC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420976.1 1345662 R 326423 CDS YP_001420977.1 154685816 5463090 complement(1347030..1347530) 1 NC_009725.1 conserved hypothetical protein YkuD; hypothetical protein 1347530 ykuD 5463090 ykuD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420977.1 1347030 R 326423 CDS YP_001420978.1 154685817 5463091 complement(1347599..1348414) 1 NC_009725.1 phosphoesterase YkuE; hypothetical protein 1348414 ykuE 5463091 ykuE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420978.1 1347599 R 326423 CDS YP_001420979.1 154685818 5463092 1348607..1349371 1 NC_009725.1 hypothetical oxidoreductase YkuF; short chain dehydrogenase 1349371 ykuF 5463092 ykuF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 short chain dehydrogenase YP_001420979.1 1348607 D 326423 CDS YP_001420980.1 154685819 5463093 1350127..1351347 1 NC_009725.1 conserved hypothetical protein YkuI; hypothetical protein 1351347 ykuI 5463093 ykuI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420980.1 1350127 D 326423 CDS YP_001420981.1 154685820 5461408 1351792..1352031 1 NC_009725.1 hypothetical protein YkuJ; hypothetical protein 1352031 ykuJ 5461408 ykuJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420981.1 1351792 D 326423 CDS YP_001420982.1 154685821 5461409 1352154..1352672 1 NC_009725.1 conserved hypothetical protein YkuK; hypothetical protein 1352672 ykuK 5461409 ykuK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420982.1 1352154 D 326423 CDS YP_001420983.1 154685822 5461410 1352813..1353004 1 NC_009725.1 hypothetical protein YkzF; hypothetical protein 1353004 ykzF 5461410 ykzF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420983.1 1352813 D 326423 CDS YP_001420984.1 154685823 5461411 1353148..1353591 1 NC_009725.1 conserved hypothetical protein YkuL; hypothetical protein 1353591 ykuL 5461411 ykuL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420984.1 1353148 D 326423 CDS YP_001420985.1 154685824 5461412 1353732..1354613 1 NC_009725.1 HTH-type transcriptional regulator CcpC; CcpC 1354613 ccpC 5461412 ccpC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 CcpC YP_001420985.1 1353732 D 326423 CDS YP_001420986.1 154685825 5461413 1354725..1355198 1 NC_009725.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin 1355198 ykuN 5461413 ykuN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 flavodoxin YP_001420986.1 1354725 D 326423 CDS YP_001420987.1 154685826 5461522 1355188..1356081 1 NC_009725.1 conserved hypothetical protein YkuO; hypothetical protein 1356081 ykuO 5461522 ykuO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420987.1 1355188 D 326423 CDS YP_001420988.1 154685827 5461523 1356108..1356563 1 NC_009725.1 probable flavodoxin-2 YkuP; hypothetical protein 1356563 ykuP 5461523 ykuP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420988.1 1356108 D 326423 CDS YP_001420989.1 154685828 5461524 1356645..1357355 1 NC_009725.1 etrahydrodipicolinate succinylase YkuQ; hypothetical protein 1357355 ykuQ 5461524 ykuQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420989.1 1356645 D 326423 CDS YP_001420990.1 154685829 5461525 1357426..1358550 1 NC_009725.1 hippurate hydrolase homolog YkuR; hypothetical protein 1358550 ykuR 5461525 ykuR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420990.1 1357426 D 326423 CDS YP_001420991.1 154685830 5461526 1358611..1358856 1 NC_009725.1 conserved hypothetical protein YkuS; hypothetical protein 1358856 ykuS 5461526 ykuS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420991.1 1358611 D 326423 CDS YP_001420992.1 154685831 5461527 complement(1358890..1359696) 1 NC_009725.1 conserved hypothetical protein YkuT; hypothetical protein 1359696 ykuT 5461527 ykuT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420992.1 1358890 R 326423 CDS YP_001420993.1 154685832 5462492 1359985..1360443 1 NC_009725.1 hypothetical protein YkuV; hypothetical protein 1360443 ykuV 5462492 ykuV Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420993.1 1359985 D 326423 CDS YP_001420994.1 154685833 5462493 1360896..1361492 1 NC_009725.1 comK repressor Rok; Rok 1361492 rok 5462493 rok Bacillus amyloliquefaciens subsp. plantarum str. FZB42 Rok YP_001420994.1 1360896 D 326423 CDS YP_001420995.1 154685834 5462494 complement(1361513..1362505) 1 NC_009725.1 conserved hypothetical protein YknT; hypothetical protein 1362505 yknT 5462494 yknT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420995.1 1361513 R 326423 CDS YP_001420996.1 154685835 5462495 1362651..1363253 1 NC_009725.1 Molybdopterin-guanine dinucleotide biosynthesis protein MobA; hypothetical protein 1363253 mobA 5462495 mobA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420996.1 1362651 D 326423 CDS YP_001420997.1 154685836 5462496 1363305..1364324 1 NC_009725.1 catalyzes the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD or ThiS in the molybdopterin or thiamin pyrophosphate biosynthesis pathways; thiamine/molybdopterin biosynthesis MoeB-like protein 1364324 moeB 5462496 moeB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 thiamine/molybdopterin biosynthesis MoeB-like protein YP_001420997.1 1363305 D 326423 CDS YP_001420998.1 154685837 5462497 1364342..1365634 1 NC_009725.1 molybdopterin biosynthesis protein MoeA; hypothetical protein 1365634 moeA 5462497 moeA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420998.1 1364342 D 326423 CDS YP_001420999.1 154685838 5462361 1365601..1366116 1 NC_009725.1 molybdopterin-guanine dinucleotide biosynthesis protein MobB; hypothetical protein 1366116 mobB 5462361 mobB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001420999.1 1365601 D 326423 CDS YP_001421000.1 154685839 5462362 1366117..1366587 1 NC_009725.1 molybdenum cofactor biosynthesis protein MoaE; hypothetical protein 1366587 moaE 5462362 moaE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421000.1 1366117 D 326423 CDS YP_001421001.1 154685840 5462363 1366584..1366817 1 NC_009725.1 molybdopterin converting factor (subunit I) MoaD; hypothetical protein 1366817 moaD 5462363 moaD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421001.1 1366584 D 326423 CDS YP_001421002.1 154685841 5462364 1367141..1367839 1 NC_009725.1 hypothetical protein YknW; hypothetical protein 1367839 yknW 5462364 yknW Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421002.1 1367141 D 326423 CDS YP_001421003.1 154685842 5462365 1367841..1368977 1 NC_009725.1 secretion protein YknX; hypothetical protein 1368977 yknX 5462365 yknX Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421003.1 1367841 D 326423 CDS YP_001421004.1 154685843 5462366 1368978..1369670 1 NC_009725.1 ABC transporter (ATP-binding protein) YknY; hypothetical protein 1369670 yknY 5462366 yknY Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421004.1 1368978 D 326423 CDS YP_001421005.1 154685844 5459630 1369667..1370860 1 NC_009725.1 ABC transporter permease YknZ; hypothetical protein 1370860 yknZ 5459630 yknZ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421005.1 1369667 D 326423 CDS YP_001421006.1 154685845 5459631 1371142..1371897 1 NC_009725.1 transcription repressor of fructose operon FruR; FruR 1371897 fruR 5459631 fruR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 FruR YP_001421006.1 1371142 D 326423 CDS YP_001421007.1 154685846 5459632 1371894..1372805 1 NC_009725.1 fructose 1-phosphate kinase FruK; hypothetical protein 1372805 fruK 5459632 fruK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421007.1 1371894 D 326423 CDS YP_001421008.1 154685847 5459633 1372820..1374721 1 NC_009725.1 phosphotransferase system (PTS) fructose-specific enzyme IIABC component FruA; hypothetical protein 1374721 fruA 5459633 fruA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421008.1 1372820 D 326423 CDS YP_001421009.1 154685848 5459634 1374852..1375433 1 NC_009725.1 type I signal peptidase SipT; SipT 1375433 sipT 5459634 sipT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SipT YP_001421009.1 1374852 D 326423 CDS YP_001421010.1 154685849 5459635 complement(1375471..1375740) 1 NC_009725.1 hypothetical protein YkoA; hypothetical protein 1375740 ykoA 5459635 ykoA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421010.1 1375471 R 326423 CDS YP_001421011.1 154685850 5462498 1375900..1377519 1 NC_009725.1 ABC transporter (ATP-binding protein) YkpA; hypothetical protein 1377519 ykpA 5462498 ykpA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421011.1 1375900 D 326423 CDS YP_001421012.1 154685851 5462499 1377632..1378540 1 NC_009725.1 thiamin biosynthesis homolog YkpB; 2-dehydropantoate 2-reductase 1378540 ykpB 5462499 ykpB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 2-dehydropantoate 2-reductase YP_001421012.1 1377632 D 326423 CDS YP_001421013.1 154685852 5462500 complement(1378572..1379804) 1 NC_009725.1 aminopeptidase AmpS; hypothetical protein 1379804 ampS 5462500 ampS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421013.1 1378572 R 326423 CDS YP_001421014.1 154685853 5462501 complement(1379905..1380039) 1 NC_009725.1 hypothetical protein YkpC; hypothetical protein 1380039 ykpC 5462501 ykpC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421014.1 1379905 R 326423 CDS YP_001421015.1 154685854 5462502 complement(1380111..1381118) 1 NC_009725.1 cell-shape determining protein MreBH; rod-share determining protein MreBH 1381118 mreBH 5462502 mreBH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 rod-share determining protein MreBH YP_001421015.1 1380111 R 326423 CDS YP_001421016.1 154685855 5462503 1381389..1381673 1 NC_009725.1 transition state regulator Abh; Abh 1381673 abh 5462503 abh Bacillus amyloliquefaciens subsp. plantarum str. FZB42 Abh YP_001421016.1 1381389 D 326423 CDS YP_001421017.1 154685856 5461692 1381846..1383150 1 NC_009725.1 sporulation kinase C (KinC); KinC 1383150 kinC 5461692 kinC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 KinC YP_001421017.1 1381846 D 326423 CDS YP_001421018.1 154685857 5461693 1383152..1383979 1 NC_009725.1 conserved hypothetical protein YkqA; hypothetical protein 1383979 ykqA 5461693 ykqA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421018.1 1383152 D 326423 CDS YP_001421019.1 154685858 5461694 1384020..1384685 1 NC_009725.1 conserved hypothetical protein YkqB; hypothetical protein 1384685 ykqB 5461694 ykqB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421019.1 1384020 D 326423 CDS YP_001421020.1 154685859 5461695 1384834..1386567 1 NC_009725.1 adenine deaminase AdeC; hypothetical protein 1386567 adeC 5461695 adeC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421020.1 1384834 D 326423 CDS YP_001421021.1 154685860 5461696 complement(1386599..1388266) 1 NC_009725.1 conserved hypothetical protein YkqC; hypothetical protein 1388266 ykqC 5461696 ykqC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421021.1 1386599 R 326423 CDS YP_001421022.1 154685861 5461697 complement(1388272..1388481) 1 NC_009725.1 hypothetical protein YkzG; hypothetical protein 1388481 ykzG 5461697 ykzG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421022.1 1388272 R 326423 CDS YP_001421023.1 154685862 5462536 1388836..1389609 1 NC_009725.1 conserved hypothetical protein YkrA; hypothetical protein 1389609 ykrA 5462536 ykrA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421023.1 1388836 D 326423 CDS YP_001421024.1 154685863 5462537 complement(1389644..1390198) 1 NC_009725.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 1390198 def 5462537 def Bacillus amyloliquefaciens subsp. plantarum str. FZB42 peptide deformylase YP_001421024.1 1389644 R 326423 CDS YP_001421025.1 154685864 5462538 1390744..1391382 1 NC_009725.1 hypothetical protein YkyA; hypothetical protein 1391382 ykyA 5462538 ykyA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421025.1 1390744 D 326423 CDS YP_001421026.1 154685865 5462539 complement(1391530..1391697) 1 NC_009725.1 hypothetical protein 1391697 5462539 RBAM_014320 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421026.1 1391530 R 326423 CDS YP_001421027.1 154685866 5462540 1391841..1394147 1 NC_009725.1 macrolactin synthesis; malonyl-CoA transacylase [AT]/oxidoreductase [OR]; MlnA 1394147 mlnA 5462540 mlnA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 MlnA YP_001421027.1 1391841 D 326423 CDS YP_001421028.1 154685867 5462541 1394169..1406429 1 NC_009725.1 macrolactin synthesis; polyketide synthase of type I; MlnB 1406429 mlnB 5462541 mlnB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 MlnB YP_001421028.1 1394169 D 326423 CDS YP_001421029.1 154685868 5462225 1406429..1411201 1 NC_009725.1 macrolactin synthesis; polyketide synthase of type I; MlnC 1411201 mlnC 5462225 mlnC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 MlnC YP_001421029.1 1406429 D 326423 CDS YP_001421030.1 154685869 5462226 1411249..1419957 1 NC_009725.1 macrolactin synthesis; polyketide synthase of type I; MlnD 1419957 mlnD 5462226 mlnD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 MlnD YP_001421030.1 1411249 D 326423 CDS YP_001421031.1 154685870 5462227 1419950..1426954 1 NC_009725.1 macrolactin synthesis; polyketide synthase of type I; MlnE 1426954 mlnE 5462227 mlnE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 MlnE YP_001421031.1 1419950 D 326423 CDS YP_001421032.1 154685871 5462228 1426978..1432689 1 NC_009725.1 macrolactin synthesis; polyketide synthase of type I; MlnF 1432689 mlnF 5462228 mlnF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 MlnF YP_001421032.1 1426978 D 326423 CDS YP_001421033.1 154685872 5462229 1432686..1440068 1 NC_009725.1 macrolactin synthesis; polyketide synthase of type I; MlnG 1440068 mlnG 5462229 mlnG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 MlnG YP_001421033.1 1432686 D 326423 CDS YP_001421034.1 154685873 5462230 1440119..1443970 1 NC_009725.1 macrolactin synthesis; polyketide synthase of type I; MlnH 1443970 mlnH 5462230 mlnH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 MlnH YP_001421034.1 1440119 D 326423 CDS YP_001421035.1 154685874 5461528 1444003..1445094 1 NC_009725.1 macrolactin synthesis; penicillin binding protein; MlnI 1445094 mlnI 5461528 mlnI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 MlnI YP_001421035.1 1444003 D 326423 CDS YP_001421036.1 154685875 5461529 1445565..1446680 1 NC_009725.1 pyruvate dehydrogenase E1 alpha subunit PdhA; PdhA 1446680 pdhA 5461529 pdhA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 PdhA YP_001421036.1 1445565 D 326423 CDS YP_001421037.1 154685876 5461530 1446684..1447661 1 NC_009725.1 pyruvate dehydrogenase E1 beta subunit PdhB; hypothetical protein 1447661 pdhB 5461530 pdhB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421037.1 1446684 D 326423 CDS YP_001421038.1 154685877 5461531 1447785..1449113 1 NC_009725.1 pyruvate dehydrogenase (dihydrolipoamide acetyltransferase E2 subunit) PdhC; branched-chain alpha-keto acid dehydrogenase subunit E2 1449113 pdhC 5461531 pdhC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 branched-chain alpha-keto acid dehydrogenase subunit E2 YP_001421038.1 1447785 D 326423 CDS YP_001421039.1 154685878 5461532 1449118..1450530 1 NC_009725.1 E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 1450530 pdhD 5461532 pdhD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 dihydrolipoamide dehydrogenase YP_001421039.1 1449118 D 326423 CDS YP_001421040.1 154685879 5461533 complement(1450578..1450952) 1 NC_009725.1 small peptidoglycan-associated lipoprotein Slp; Slp 1450952 slp 5461533 slp Bacillus amyloliquefaciens subsp. plantarum str. FZB42 Slp YP_001421040.1 1450578 R 326423 CDS YP_001421041.1 154685880 5460543 1451201..1452001 1 NC_009725.1 polysaccharide deacetylase 1452001 5460543 RBAM_014470 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 polysaccharide deacetylase YP_001421041.1 1451201 D 326423 CDS YP_001421042.1 154685881 5460544 1452115..1452234 1 NC_009725.1 hypothetical protein 1452234 5460544 RBAM_014480 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421042.1 1452115 D 326423 CDS YP_001421043.1 154685882 5460545 complement(1452282..1453754) 1 NC_009725.1 arginine/lysine decarboxylase SpeA; SpeA 1453754 speA 5460545 speA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SpeA YP_001421043.1 1452282 R 326423 CDS YP_001421044.1 154685883 5460546 1453934..1454200 1 NC_009725.1 hypothetical protein YktA; hypothetical protein 1454200 yktA 5460546 yktA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421044.1 1453934 D 326423 CDS YP_001421045.1 154685884 5460547 complement(1454235..1454867) 1 NC_009725.1 hypothetical protein YktB; hypothetical protein 1454867 yktB 5460547 yktB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421045.1 1454235 R 326423 CDS YP_001421046.1 154685885 5460548 1455104..1455292 1 NC_009725.1 hypothetical protein YkzI; hypothetical protein 1455292 ykzI 5460548 ykzI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421046.1 1455104 D 326423 CDS YP_001421047.1 154685886 5459775 1455426..1456223 1 NC_009725.1 inositol-1-monophosphatase SuhB; hypothetical protein 1456223 suhB 5459775 suhB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421047.1 1455426 D 326423 CDS YP_001421048.1 154685887 5459776 1456210..1456662 1 NC_009725.1 conserved hypothetical protein YkzC; hypothetical protein 1456662 ykzC 5459776 ykzC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421048.1 1456210 D 326423 CDS YP_001421049.1 154685888 5459777 complement(1456714..1458279) 1 NC_009725.1 bacillolysin precursor NprE; NprE 1458279 nprE 5459777 nprE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 NprE YP_001421049.1 1456714 R 326423 CDS YP_001421050.1 154685889 5459778 1458602..1459675 1 NC_009725.1 hypothetical protein YlaA1; hypothetical protein 1459675 ylaA1 5459778 ylaA1 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421050.1 1458602 D 326423 CDS YP_001421051.1 154685890 5459779 1459759..1460538 1 NC_009725.1 hypothetical protein YlaA2; hypothetical protein 1460538 ylaA2 5459779 ylaA2 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421051.1 1459759 D 326423 CDS YP_001421052.1 154685891 5459780 1460528..1460797 1 NC_009725.1 hypothetical protein YlaB; hypothetical protein 1460797 ylaB 5459780 ylaB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421052.1 1460528 D 326423 CDS YP_001421053.1 154685892 5461993 1460798..1461319 1 NC_009725.1 RNA polymerase sigma-70 factor YlaC; hypothetical protein 1461319 ylaC 5461993 ylaC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421053.1 1460798 D 326423 CDS YP_001421054.1 154685893 5461994 1461316..1461609 1 NC_009725.1 hypothetical protein YlaD; hypothetical protein 1461609 ylaD 5461994 ylaD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421054.1 1461316 D 326423 CDS YP_001421055.1 154685894 5461995 complement(1461647..1462264) 1 NC_009725.1 hypothetical protein YlaE; hypothetical protein 1462264 ylaE 5461995 ylaE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421055.1 1461647 R 326423 CDS YP_001421056.1 154685895 5461996 complement(1462574..1462762) 1 NC_009725.1 hypothetical protein YlaF; hypothetical protein 1462762 ylaF 5461996 ylaF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421056.1 1462574 R 326423 CDS YP_001421057.1 154685896 5461997 1462874..1464712 1 NC_009725.1 GTP-binding elongation factor YlaG; hypothetical protein 1464712 ylaG 5461997 ylaG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421057.1 1462874 D 326423 CDS YP_001421058.1 154685897 5461998 1464769..1465089 1 NC_009725.1 hypothetical protein YlaH; hypothetical protein 1465089 ylaH 5461998 ylaH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421058.1 1464769 D 326423 CDS YP_001421059.1 154685898 5459498 complement(1465132..1465341) 1 NC_009725.1 hypothetical protein YlaI; hypothetical protein 1465341 ylaI 5459498 ylaI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421059.1 1465132 R 326423 CDS YP_001421060.1 154685899 5459499 complement(1465444..1466067) 1 NC_009725.1 hypothetical protein YlaJ; hypothetical protein 1466067 ylaJ 5459499 ylaJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421060.1 1465444 R 326423 CDS YP_001421061.1 154685900 5459500 1466222..1467550 1 NC_009725.1 phosphate starvation inducible protein YlaK; hypothetical protein 1467550 ylaK 5459500 ylaK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421061.1 1466222 D 326423 CDS YP_001421062.1 154685901 5459501 complement(1467545..1468021) 1 NC_009725.1 hypothetical protein YlaL; hypothetical protein 1468021 ylaL 5459501 ylaL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421062.1 1467545 R 326423 CDS YP_001421063.1 154685902 5459502 1468125..1469054 1 NC_009725.1 catalyzes the formation of glutamate from glutamine; glutaminase 1469054 ylaM 5459502 ylaM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 glutaminase YP_001421063.1 1468125 D 326423 CDS YP_001421064.1 154685903 5459503 1469162..1469443 1 NC_009725.1 depletion of this protein in Bacillus subtilis results in defects in cell morphology; crystal structure of Staphylococcus protein shows homodimer; ligand binding protein; hypothetical protein 1469443 ylaN 5459503 ylaN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421064.1 1469162 D 326423 CDS YP_001421065.1 154685904 5462164 1469649..1470860 1 NC_009725.1 cell division protein FtsW; hypothetical protein 1470860 ftsW 5462164 ftsW Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421065.1 1469649 D 326423 CDS YP_001421066.1 154685905 5462165 1470936..1474382 1 NC_009725.1 biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate; pyruvate carboxylase 1474382 pycA 5462165 pycA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 pyruvate carboxylase YP_001421066.1 1470936 D 326423 CDS YP_001421067.1 154685906 5462166 complement(1474480..1475406) 1 NC_009725.1 cytochrome aa3-controlling protein CtaA; hypothetical protein 1475406 ctaA 5462166 ctaA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421067.1 1474480 R 326423 CDS YP_001421068.1 154685907 5462167 1475750..1476667 1 NC_009725.1 converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 1476667 ctaB 5462167 ctaB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 protoheme IX farnesyltransferase YP_001421068.1 1475750 D 326423 CDS YP_001421069.1 154685908 5462168 1476885..1477955 1 NC_009725.1 cytochrome c oxidase subunit II precursor CtaC; hypothetical protein 1477955 ctaC 5462168 ctaC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421069.1 1476885 D 326423 CDS YP_001421070.1 154685909 5462169 1477987..1479855 1 NC_009725.1 cytochrome caa3 oxidase (subunit I) CtaD; hypothetical protein 1479855 ctaD 5462169 ctaD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421070.1 1477987 D 326423 CDS YP_001421071.1 154685910 5460369 1479855..1480478 1 NC_009725.1 cytochrome caa3 oxidase (subunit III) CtaE; hypothetical protein 1480478 ctaE 5460369 ctaE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421071.1 1479855 D 326423 CDS YP_001421072.1 154685911 5460370 1480481..1480813 1 NC_009725.1 cytochrome caa3 oxidase (subunit IV) CtaF; hypothetical protein 1480813 ctaF 5460370 ctaF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421072.1 1480481 D 326423 CDS YP_001421073.1 154685912 5460371 1480829..1481722 1 NC_009725.1 conserved hypothetical protein CtaG; hypothetical protein 1481722 ctaG 5460371 ctaG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421073.1 1480829 D 326423 CDS YP_001421074.1 154685913 5460372 complement(1481757..1482116) 1 NC_009725.1 hypothetical protein YlbA; hypothetical protein 1482116 ylbA 5460372 ylbA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421074.1 1481757 R 326423 CDS YP_001421075.1 154685914 5460373 1482257..1482700 1 NC_009725.1 hypothetical protein YlbB; hypothetical protein 1482700 ylbB 5460373 ylbB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421075.1 1482257 D 326423 CDS YP_001421076.1 154685915 5460374 1482785..1483825 1 NC_009725.1 conserved hypothetical protein YlbC; hypothetical protein 1483825 ylbC 5460374 ylbC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421076.1 1482785 D 326423 CDS YP_001421077.1 154685916 5461445 1484001..1484411 1 NC_009725.1 hypothetical protein YlbD; hypothetical protein 1484411 ylbD 5461445 ylbD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421077.1 1484001 D 326423 CDS YP_001421078.1 154685917 5461446 1484427..1484666 1 NC_009725.1 hypothetical protein YlbE; hypothetical protein 1484666 ylbE 5461446 ylbE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421078.1 1484427 D 326423 CDS YP_001421079.1 154685918 5461447 1484737..1485186 1 NC_009725.1 positive regulator of ComK; control of community development; hypothetical protein 1485186 ylbF 5461447 ylbF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421079.1 1484737 D 326423 CDS YP_001421080.1 154685919 5461448 1485245..1485517 1 NC_009725.1 hypothetical protein YlbG; hypothetical protein 1485517 ylbG 5461448 ylbG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421080.1 1485245 D 326423 CDS YP_001421081.1 154685920 5461449 1485817..1486371 1 NC_009725.1 conserved hypothetical protein YlbH; hypothetical protein 1486371 ylbH 5461449 ylbH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421081.1 1485817 D 326423 CDS YP_001421082.1 154685921 5461450 1486376..1486858 1 NC_009725.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 1486858 coaD 5461450 coaD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 phosphopantetheine adenylyltransferase YP_001421082.1 1486376 D 326423 CDS YP_001421083.1 154685922 5463270 complement(1486877..1488103) 1 NC_009725.1 conserved hypothetical protein YlbJ; hypothetical protein 1488103 ylbJ 5463270 ylbJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421083.1 1486877 R 326423 CDS YP_001421084.1 154685923 5463271 1488283..1489062 1 NC_009725.1 conserved hypothetical protein YlbK; hypothetical protein 1489062 ylbK 5463271 ylbK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421084.1 1488283 D 326423 CDS YP_001421085.1 154685924 5463272 1489068..1490090 1 NC_009725.1 conserved hypothetical protein YlbL; hypothetical protein 1490090 ylbL 5463272 ylbL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421085.1 1489068 D 326423 CDS YP_001421086.1 154685925 5463273 complement(1490109..1491356) 1 NC_009725.1 conserved hypothetical protein YlbM; hypothetical protein 1491356 ylbM 5463273 ylbM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421086.1 1490109 R 326423 CDS YP_001421087.1 154685926 5463274 1491565..1492083 1 NC_009725.1 conserved hypothetical protein YlbN; hypothetical protein 1492083 ylbN 5463274 ylbN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421087.1 1491565 D 326423 CDS YP_001421088.1 154685927 5463275 1492105..1492284 1 NC_009725.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 1492284 rpmF 5463275 rpmF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 50S ribosomal protein L32 YP_001421088.1 1492105 D 326423 CDS YP_001421089.1 154685928 5460363 1492443..1493018 1 NC_009725.1 hypothetical protein YlbO; spore coat protein regulator protein YlbO 1493018 ylbO 5460363 ylbO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 spore coat protein regulator protein YlbO YP_001421089.1 1492443 D 326423 CDS YP_001421090.1 154685929 5460364 complement(1493058..1493540) 1 NC_009725.1 conserved hypothetical protein YlbP; hypothetical protein 1493540 ylbP 5460364 ylbP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421090.1 1493058 R 326423 CDS YP_001421091.1 154685930 5460365 1493703..1494584 1 NC_009725.1 ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis; 2-dehydropantoate 2-reductase 1494584 ylbQ 5460365 ylbQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 2-dehydropantoate 2-reductase YP_001421091.1 1493703 D 326423 CDS YP_001421092.1 154685931 5460366 1494671..1496290 1 NC_009725.1 conserved hypothetical protein YllA; hypothetical protein 1496290 yllA 5460366 yllA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421092.1 1494671 D 326423 CDS YP_001421093.1 154685932 5460367 1496416..1496847 1 NC_009725.1 MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ 1496847 yllB 5460367 yllB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 cell division protein MraZ YP_001421093.1 1496416 D 326423 CDS YP_001421094.1 154685933 5460368 1496917..1497852 1 NC_009725.1 conserved hypothetical protein YlxA; S-adenosyl-methyltransferase MraW 1497852 mraW 5460368 mraW Bacillus amyloliquefaciens subsp. plantarum str. FZB42 S-adenosyl-methyltransferase MraW YP_001421094.1 1496917 D 326423 CDS YP_001421095.1 154685934 5461791 1497892..1498245 1 NC_009725.1 cell-division protein FtsL; hypothetical protein 1498245 ftsL 5461791 ftsL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421095.1 1497892 D 326423 CDS YP_001421096.1 154685935 5461792 1498252..1500396 1 NC_009725.1 penicillin-binding protein IIB PbpB; PbpB 1500396 pbpB 5461792 pbpB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 PbpB YP_001421096.1 1498252 D 326423 CDS YP_001421097.1 154685936 5461793 1500510..1502429 1 NC_009725.1 stage V sporulation protein SpoVD; SpoVD 1502429 spoVD 5461793 spoVD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SpoVD YP_001421097.1 1500510 D 326423 CDS YP_001421098.1 154685937 5461794 1502625..1504097 1 NC_009725.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 1504097 murE 5461794 murE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_001421098.1 1502625 D 326423 CDS YP_001421099.1 154685938 5461795 1504205..1505179 1 NC_009725.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 1505179 mraY 5461795 mraY Bacillus amyloliquefaciens subsp. plantarum str. FZB42 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_001421099.1 1504205 D 326423 CDS YP_001421100.1 154685939 5461796 1505180..1506535 1 NC_009725.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 1506535 murD 5461796 murD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase YP_001421100.1 1505180 D 326423 CDS YP_001421101.1 154685940 5462577 1506594..1507694 1 NC_009725.1 stage V sporulation protein SpoVE; SpoVE 1507694 spoVE 5462577 spoVE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SpoVE YP_001421101.1 1506594 D 326423 CDS YP_001421102.1 154685941 5462578 1507811..1508902 1 NC_009725.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 1508902 murG 5462578 murG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase YP_001421102.1 1507811 D 326423 CDS YP_001421103.1 154685942 5462579 1508928..1509839 1 NC_009725.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 1509839 murB 5462579 murB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 UDP-N-acetylenolpyruvoylglucosamine reductase YP_001421103.1 1508928 D 326423 CDS YP_001421104.1 154685943 5462580 1509968..1510756 1 NC_009725.1 cell-division initiation protein DivIB; DivIB 1510756 divIB 5462580 divIB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DivIB YP_001421104.1 1509968 D 326423 CDS YP_001421105.1 154685944 5462581 1511306..1512619 1 NC_009725.1 cell-division protein FtsA; hypothetical protein 1512619 ftsA 5462581 ftsA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421105.1 1511306 D 326423 CDS YP_001421106.1 154685945 5462582 1512655..1513803 1 NC_009725.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 1513803 ftsZ 5462582 ftsZ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 cell division protein FtsZ YP_001421106.1 1512655 D 326423 CDS YP_001421107.1 154685946 5462951 1514078..1518373 1 NC_009725.1 bacillopeptidase F precursor; upregulated by plant exudate; Bpr 1518373 bpr 5462951 bpr Bacillus amyloliquefaciens subsp. plantarum str. FZB42 Bpr YP_001421107.1 1514078 D 326423 CDS YP_001421108.1 154685947 5462952 1518589..1519518 1 NC_009725.1 sporulation sigma-E factor processing peptidase (stage II sporulation protein GA) SpoIIGA; SpoIIGA 1519518 spoIIGA 5462952 spoIIGA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SpoIIGA YP_001421108.1 1518589 D 326423 CDS YP_001421109.1 154685948 5462953 1519576..1520295 1 NC_009725.1 sigma-29; sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed in the mother cell at the onset of sporulation; sporulation sigma factor SigE 1520295 sigE 5462953 sigE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 sporulation sigma factor SigE YP_001421109.1 1519576 D 326423 CDS YP_001421110.1 154685949 5462954 1520436..1521218 1 NC_009725.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed after engulfment; this factor is involved in the transcription of small acid-soluble proteins involved in protecting the forespore chromatin; sporulation sigma factor SigG 1521218 sigG 5462954 sigG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 sporulation sigma factor SigG YP_001421110.1 1520436 D 326423 CDS YP_001421111.1 154685950 5462955 1521347..1522144 1 NC_009725.1 ABC transporter (ATP-binding protein) YlmA; hypothetical protein 1522144 ylmA 5462955 ylmA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421111.1 1521347 D 326423 CDS YP_001421112.1 154685951 5462956 1522331..1523611 1 NC_009725.1 catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine; acetylornithine deacetylase 1523611 ylmB 5462956 ylmB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 acetylornithine deacetylase YP_001421112.1 1522331 D 326423 CDS YP_001421113.1 154685952 5462681 1523672..1523923 1 NC_009725.1 conserved hypothetical protein YlmC; hypothetical protein 1523923 ylmC 5462681 ylmC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421113.1 1523672 D 326423 CDS YP_001421114.1 154685953 5462682 1524078..1524914 1 NC_009725.1 conserved hypothetical protein YlmD; hypothetical protein 1524914 ylmD 5462682 ylmD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421114.1 1524078 D 326423 CDS YP_001421115.1 154685954 5462683 1524919..1525611 1 NC_009725.1 conserved hypothetical protein YlmE; hypothetical protein 1525611 ylmE 5462683 ylmE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421115.1 1524919 D 326423 CDS YP_001421116.1 154685955 5462684 1525608..1526066 1 NC_009725.1 conserved hypothetical protein YlmF; hypothetical protein 1526066 ylmF 5462684 ylmF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421116.1 1525608 D 326423 CDS YP_001421117.1 154685956 5462685 1526073..1526351 1 NC_009725.1 conserved hypothetical protein YlmG; hypothetical protein 1526351 ylmG 5462685 ylmG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421117.1 1526073 D 326423 CDS YP_001421118.1 154685957 5462686 1526413..1527183 1 NC_009725.1 conserved hypothetical protein YlmH; hypothetical protein 1527183 ylmH 5462686 ylmH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421118.1 1526413 D 326423 CDS YP_001421119.1 154685958 5462520 1527278..1527772 1 NC_009725.1 cell-division initiation protein DivIVA; hypothetical protein 1527772 divIVA 5462520 divIVA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421119.1 1527278 D 326423 CDS YP_001421120.1 154685959 5462521 1528115..1530880 1 NC_009725.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 1530880 ileS 5462521 ileS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 isoleucyl-tRNA synthetase YP_001421120.1 1528115 D 326423 CDS YP_001421121.1 154685960 5462522 1531031..1531402 1 NC_009725.1 conserved hypothetical protein YlyA; hypothetical protein 1531402 ylyA 5462522 ylyA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421121.1 1531031 D 326423 CDS YP_001421122.1 154685961 5462523 1531504..1531965 1 NC_009725.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 1531965 lspA 5462523 lspA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 lipoprotein signal peptidase YP_001421122.1 1531504 D 326423 CDS YP_001421123.1 154685962 5462524 1531967..1532881 1 NC_009725.1 pseudouridylate synthase YlyB; hypothetical protein 1532881 ylyB 5462524 ylyB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421123.1 1531967 D 326423 CDS YP_001421124.1 154685963 5462525 1533070..1533615 1 NC_009725.1 regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity; bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase 1533615 pyrR 5462525 pyrR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase YP_001421124.1 1533070 D 326423 CDS YP_001421125.1 154685964 5462417 1533770..1535080 1 NC_009725.1 uracil permease PyrP; PyrP 1535080 pyrP 5462417 pyrP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 PyrP YP_001421125.1 1533770 D 326423 CDS YP_001421126.1 154685965 5462418 1535221..1536135 1 NC_009725.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase 1536135 pyrB 5462418 pyrB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 aspartate carbamoyltransferase YP_001421126.1 1535221 D 326423 CDS YP_001421127.1 154685966 5462419 1536119..1537405 1 NC_009725.1 dihydroorotase PyrC; hypothetical protein 1537405 pyrC 5462419 pyrC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421127.1 1536119 D 326423 CDS YP_001421128.1 154685967 5462420 1537402..1538496 1 NC_009725.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 1538496 pyrAA 5462420 pyrAA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 carbamoyl phosphate synthase small subunit YP_001421128.1 1537402 D 326423 CDS YP_001421129.1 154685968 5462421 1538481..1541696 1 NC_009725.1 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 1541696 carB 5462421 carB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 carbamoyl phosphate synthase large subunit YP_001421129.1 1538481 D 326423 CDS YP_001421130.1 154685969 5462422 1541693..1542463 1 NC_009725.1 responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the pyrD subunit to the ultimate electron acceptor NAD(+); dihydroorotate dehydrogenase electron transfer subunit 1542463 pyrK 5462422 pyrK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 dihydroorotate dehydrogenase electron transfer subunit YP_001421130.1 1541693 D 326423 CDS YP_001421131.1 154685970 5461856 1542463..1543398 1 NC_009725.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway, using a flavin nucleotide as an essential cofactor; subclass 1B is a heterotetramer consisting of two PyrDB subunits, similar to the PyrDA subunits and two PyrK subunits; dihydroorotate dehydrogenase 1B 1543398 pyrD 5461856 pyrD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 dihydroorotate dehydrogenase 1B YP_001421131.1 1542463 D 326423 CDS YP_001421132.1 154685971 5461857 1543367..1544083 1 NC_009725.1 type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase 1544083 pyrF 5461857 pyrF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 orotidine 5'-phosphate decarboxylase YP_001421132.1 1543367 D 326423 CDS YP_001421133.1 154685972 5461858 1544062..1544712 1 NC_009725.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 1544712 pyrE 5461858 pyrE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 orotate phosphoribosyltransferase YP_001421133.1 1544062 D 326423 CDS YP_001421134.1 154685973 5461859 1545045..1545746 1 NC_009725.1 phosphoadenosine phosphosulfate reductase CysH; hypothetical protein 1545746 cysH 5461859 cysH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421134.1 1545045 D 326423 CDS YP_001421135.1 154685974 5461860 1545759..1546823 1 NC_009725.1 sulfate permease CysP; CysP 1546823 cysP 5461860 cysP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 CysP YP_001421135.1 1545759 D 326423 CDS YP_001421136.1 154685975 5461861 1546872..1548020 1 NC_009725.1 ATP sulfurylase; ATPS; converts ATP and sulfate to 5'phosphosulfate and pyrophosphate; in some organisms this enzyme is involved in the incorporation of inorganic sulfate while in others it is involved in the production of ATP in the reverse direction; the enzyme from Thermus thermophilus is dimeric and binds a zinc ion that is coordinated by cysteine and histidine residues that are not found in all related proteins but is found in some thermophilic organisms; sulfate adenylyltransferase 1548020 sat 5461861 sat Bacillus amyloliquefaciens subsp. plantarum str. FZB42 sulfate adenylyltransferase YP_001421136.1 1546872 D 326423 CDS YP_001421137.1 154685976 5461451 1548034..1548627 1 NC_009725.1 adenylyl-sulfate kinase CysC; hypothetical protein 1548627 cysC 5461451 cysC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421137.1 1548034 D 326423 CDS YP_001421138.1 154685977 5461452 1548752..1549525 1 NC_009725.1 uroporphyrin-III C-methyltransferase YlnD; hypothetical protein 1549525 ylnD 5461452 ylnD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421138.1 1548752 D 326423 CDS YP_001421139.1 154685978 5461453 1549526..1550311 1 NC_009725.1 sirohydrochlorin ferrochelatase SirB; SirB 1550311 sirB 5461453 sirB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SirB YP_001421139.1 1549526 D 326423 CDS YP_001421140.1 154685979 5461454 1550292..1550780 1 NC_009725.1 uroporphyrin-III C-methyltransferase YlnF; hypothetical protein 1550780 ylnF 5461454 ylnF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421140.1 1550292 D 326423 CDS YP_001421141.1 154685980 5461455 complement(1551228..1552934) 1 NC_009725.1 uroporphyrin-III C-methyltransferase YloA; hypothetical protein 1552934 yloA 5461455 yloA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421141.1 1551228 R 326423 CDS YP_001421142.1 154685981 5461456 1553054..1555726 1 NC_009725.1 calcium-transporting ATPase YloB; hypothetical protein 1555726 yloB 5461456 yloB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421142.1 1553054 D 326423 CDS YP_001421143.1 154685982 5460398 1555808..1556683 1 NC_009725.1 conserved hypothetical protein YloC; hypothetical protein 1556683 yloC 5460398 yloC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421143.1 1555808 D 326423 CDS YP_001421144.1 154685983 5460399 1556760..1557029 1 NC_009725.1 conserved hypothetical protein YlzA; hypothetical protein 1557029 ylzA 5460399 ylzA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421144.1 1556760 D 326423 CDS YP_001421145.1 154685984 5460400 1557037..1557651 1 NC_009725.1 Essential for recycling GMP and indirectly, cGMP; guanylate kinase 1557651 gmk 5460400 gmk Bacillus amyloliquefaciens subsp. plantarum str. FZB42 guanylate kinase YP_001421145.1 1557037 D 326423 CDS YP_001421146.1 154685985 5460401 1557655..1557858 1 NC_009725.1 Promotes RNA polymerase assembly; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega 1557858 rpoZ 5460401 rpoZ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DNA-directed RNA polymerase subunit omega YP_001421146.1 1557655 D 326423 CDS YP_001421147.1 154685986 5460402 1557949..1559169 1 NC_009725.1 pantothenate metabolism flavoprotein YloI; hypothetical protein 1559169 yloI 5460402 yloI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421147.1 1557949 D 326423 CDS YP_001421148.1 154685987 5460403 1559166..1561577 1 NC_009725.1 binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA 1561577 priA 5460403 priA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 primosome assembly protein PriA YP_001421148.1 1559166 D 326423 CDS YP_001421149.1 154685988 5460549 1561602..1562084 1 NC_009725.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 1562084 defA 5460549 defA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 peptide deformylase YP_001421149.1 1561602 D 326423 CDS YP_001421150.1 154685989 5460550 1562089..1563042 1 NC_009725.1 methionyl-tRNA formyltransferase Fmt; hypothetical protein 1563042 fmt 5460550 fmt Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421150.1 1562089 D 326423 CDS YP_001421151.1 154685990 5460551 1563029..1564372 1 NC_009725.1 ribosomal RNA small subunit methyltransferase RsmB; RsmB 1564372 rsmB 5460551 rsmB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 RsmB YP_001421151.1 1563029 D 326423 CDS YP_001421152.1 154685991 5460552 1564376..1565467 1 NC_009725.1 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N 1565467 yloN 5460552 yloN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ribosomal RNA large subunit methyltransferase N YP_001421152.1 1564376 D 326423 CDS YP_001421153.1 154685992 5460553 1565464..1566234 1 NC_009725.1 protein phosphatase PrpC; PrpC 1566234 prpC 5460553 prpC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 PrpC YP_001421153.1 1565464 D 326423 CDS YP_001421154.1 154685993 5460554 1566228..1568171 1 NC_009725.1 serine/threonine-protein kinase PrkC; PrkC 1568171 prkC 5460554 prkC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 PrkC YP_001421154.1 1566228 D 326423 CDS YP_001421155.1 154685994 5460088 1568186..1569076 1 NC_009725.1 EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity; ribosome-associated GTPase 1569076 engC 5460088 engC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ribosome-associated GTPase YP_001421155.1 1568186 D 326423 CDS YP_001421156.1 154685995 5460089 1569078..1569728 1 NC_009725.1 catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate; ribulose-phosphate 3-epimerase 1569728 rpe 5460089 rpe Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ribulose-phosphate 3-epimerase YP_001421156.1 1569078 D 326423 CDS YP_001421157.1 154685996 5460090 1569797..1570441 1 NC_009725.1 thiamin pyrophosphokinase ThiN; ThiN 1570441 thiN 5460090 thiN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ThiN YP_001421157.1 1569797 D 326423 CDS YP_001421158.1 154685997 5460091 1570528..1570608 1 NC_009725.1 involved in the production of the spore cortex and coat; stage V sporulation protein M 1570608 spoVM 5460091 spoVM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 stage V sporulation protein M YP_001421158.1 1570528 D 326423 CDS YP_001421159.1 154685998 5460092 complement(1570686..1570874) 1 NC_009725.1 required for 70S ribosome assembly; 50S ribosomal protein L28 1570874 rpmB 5460092 rpmB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 50S ribosomal protein L28 YP_001421159.1 1570686 R 326423 CDS YP_001421160.1 154685999 5460093 1571133..1571495 1 NC_009725.1 conserved hypothetical protein YloU; hypothetical protein 1571495 yloU 5460093 yloU Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421160.1 1571133 D 326423 CDS YP_001421161.1 154686000 5461099 1571511..1573178 1 NC_009725.1 conserved hypothetical protein YloV; dihydroxyacetone kinase family protein 1573178 yloV 5461099 yloV Bacillus amyloliquefaciens subsp. plantarum str. FZB42 dihydroxyacetone kinase family protein YP_001421161.1 1571511 D 326423 CDS YP_001421162.1 154686001 5461100 1573321..1573983 1 NC_009725.1 L-serine dehydratase (beta chain) SdaAB; SdaAB 1573983 sdaAB 5461100 sdaAB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SdaAB YP_001421162.1 1573321 D 326423 CDS YP_001421163.1 154686002 5461101 1574004..1574906 1 NC_009725.1 L-serine dehydratase (alpha chain) SdaAA; SdaAA 1574906 sdaAA 5461101 sdaAA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SdaAA YP_001421163.1 1574004 D 326423 CDS YP_001421164.1 154686003 5461102 1574884..1576932 1 NC_009725.1 catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 1576932 recG 5461102 recG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ATP-dependent DNA helicase RecG YP_001421164.1 1574884 D 326423 CDS YP_001421165.1 154686004 5461103 1577039..1577605 1 NC_009725.1 negative regulator of genes involved in fatty acid and phospholipid biosynthesis for gram positive bacteria; fatty acid biosynthesis transcriptional regulator 1577605 fapR 5461103 fapR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 fatty acid biosynthesis transcriptional regulator YP_001421165.1 1577039 D 326423 CDS YP_001421166.1 154686005 5461104 1577619..1578617 1 NC_009725.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX 1578617 plsX 5461104 plsX Bacillus amyloliquefaciens subsp. plantarum str. FZB42 glycerol-3-phosphate acyltransferase PlsX YP_001421166.1 1577619 D 326423 CDS YP_001421167.1 154686006 5461726 1578636..1579589 1 NC_009725.1 malonyl CoA-acyl carrier protein transacylase FabD; hypothetical protein 1579589 fabD 5461726 fabD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421167.1 1578636 D 326423 CDS YP_001421168.1 154686007 5461727 1579582..1580322 1 NC_009725.1 3-oxoacyl-[acyl-carrier-protein] reductase FabG; hypothetical protein 1580322 fabG 5461727 fabG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421168.1 1579582 D 326423 CDS YP_001421169.1 154686008 5461728 1580407..1580640 1 NC_009725.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 1580640 acpP 5461728 acpP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 acyl carrier protein YP_001421169.1 1580407 D 326423 CDS YP_001421170.1 154686009 5461729 1580779..1581528 1 NC_009725.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 1581528 rnc 5461729 rnc Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ribonuclease III YP_001421170.1 1580779 D 326423 CDS YP_001421171.1 154686010 5461730 1581630..1585190 1 NC_009725.1 chromosome partition protein Smc; hypothetical protein 1585190 smc 5461730 smc Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421171.1 1581630 D 326423 CDS YP_001421172.1 154686011 5461731 1585210..1586199 1 NC_009725.1 cell division protein FtsY homolog; hypothetical protein 1586199 ftsY 5461731 ftsY Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421172.1 1585210 D 326423 CDS YP_001421173.1 154686012 5461844 1586283..1587053 1 NC_009725.1 hypothetical protein 1587053 5461844 RBAM_015790 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421173.1 1586283 D 326423 CDS YP_001421174.1 154686013 5461845 1587175..1587507 1 NC_009725.1 conserved hypothetical protein YlxM; DNA-binding protein 1587507 ylxM 5461845 ylxM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DNA-binding protein YP_001421174.1 1587175 D 326423 CDS YP_001421175.1 154686014 5461846 1587521..1588861 1 NC_009725.1 signal recognition particle-like (SRP) component Ffh; hypothetical protein 1588861 ffh 5461846 ffh Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421175.1 1587521 D 326423 CDS YP_001421176.1 154686015 5461847 1588967..1589239 1 NC_009725.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 1589239 rpsP 5461847 rpsP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 30S ribosomal protein S16 YP_001421176.1 1588967 D 326423 CDS YP_001421177.1 154686016 5461848 1589239..1589484 1 NC_009725.1 conserved hypothetical protein YlqC; hypothetical protein 1589484 ylqC 5461848 ylqC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421177.1 1589239 D 326423 CDS YP_001421178.1 154686017 5461849 1589575..1589961 1 NC_009725.1 hypothetical protein YlqD; hypothetical protein 1589961 ylqD 5461849 ylqD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421178.1 1589575 D 326423 CDS YP_001421179.1 154686018 5462809 1589966..1590490 1 NC_009725.1 Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 1590490 rimM 5462809 rimM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 16S rRNA-processing protein RimM YP_001421179.1 1589966 D 326423 CDS YP_001421180.1 154686019 5462810 1590487..1591218 1 NC_009725.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 1591218 trmD 5462810 trmD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 tRNA (guanine-N(1)-)-methyltransferase YP_001421180.1 1590487 D 326423 CDS YP_001421181.1 154686020 5462811 1591359..1591706 1 NC_009725.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 1591706 rplS 5462811 rplS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 50S ribosomal protein L19 YP_001421181.1 1591359 D 326423 CDS YP_001421182.1 154686021 5462812 1591849..1592697 1 NC_009725.1 essential GTPase; functions in ribosome assembly; binds a unique part of the 23S rRNA; interacts with ribosomal protein L25(Ctc); ribosomal biogenesis GTPase 1592697 rbgA 5462812 rbgA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ribosomal biogenesis GTPase YP_001421182.1 1591849 D 326423 CDS YP_001421183.1 154686022 5462813 1592770..1593537 1 NC_009725.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 1593537 rnhB 5462813 rnhB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ribonuclease HII YP_001421183.1 1592770 D 326423 CDS YP_001421184.1 154686023 5462814 1593554..1595257 1 NC_009725.1 hypothetical protein YlqG; hypothetical protein 1595257 ylqG 5462814 ylqG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421184.1 1593554 D 326423 CDS YP_001421185.1 154686024 5463276 1595254..1595535 1 NC_009725.1 conserved hypothetical protein YlqH; hypothetical protein 1595535 ylqH 5463276 ylqH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421185.1 1595254 D 326423 CDS YP_001421186.1 154686025 5463277 1595710..1596867 1 NC_009725.1 catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 1596867 sucC 5463277 sucC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 succinyl-CoA synthetase subunit beta YP_001421186.1 1595710 D 326423 CDS YP_001421187.1 154686026 5463278 1596896..1597798 1 NC_009725.1 Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha 1597798 sucD 5463278 sucD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 succinyl-CoA synthetase subunit alpha YP_001421187.1 1596896 D 326423 CDS YP_001421188.1 154686027 5463279 1597863..1598762 1 NC_009725.1 DNA processing protein Smf; hypothetical protein 1598762 smf 5463279 smf Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421188.1 1597863 D 326423 CDS YP_001421189.1 154686028 5463280 1598944..1601019 1 NC_009725.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 1601019 topA 5463280 topA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DNA topoisomerase I YP_001421189.1 1598944 D 326423 CDS YP_001421190.1 154686029 5463281 1601084..1602391 1 NC_009725.1 TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine; tRNA (uracil-5-)-methyltransferase Gid 1602391 gid 5463281 gid Bacillus amyloliquefaciens subsp. plantarum str. FZB42 tRNA (uracil-5-)-methyltransferase Gid YP_001421190.1 1601084 D 326423 CDS YP_001421191.1 154686030 5462957 1602461..1603378 1 NC_009725.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC 1603378 xerC 5462957 xerC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 site-specific tyrosine recombinase XerC YP_001421191.1 1602461 D 326423 CDS YP_001421192.1 154686031 5462958 1603394..1603939 1 NC_009725.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 1603939 clpQ 5462958 clpQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ATP-dependent protease peptidase subunit YP_001421192.1 1603394 D 326423 CDS YP_001421193.1 154686032 5462959 1603956..1605359 1 NC_009725.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 1605359 hslU 5462959 hslU Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ATP-dependent protease ATP-binding subunit HslU YP_001421193.1 1603956 D 326423 CDS YP_001421194.1 154686033 5462960 1605397..1606176 1 NC_009725.1 GTP binding protein; CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase (By similarity). It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; transcriptional repressor CodY 1606176 codY 5462960 codY Bacillus amyloliquefaciens subsp. plantarum str. FZB42 transcriptional repressor CodY YP_001421194.1 1605397 D 326423 CDS YP_001421195.1 154686034 5462961 1606530..1606919 1 NC_009725.1 with FlgF and C makes up the proximal portion of the flagellar basal body rod; Vibrio parahaemolyticus protein is associated with the polar flagella; flagellar basal body rod protein FlgB 1606919 flgB 5462961 flgB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 flagellar basal body rod protein FlgB YP_001421195.1 1606530 D 326423 CDS YP_001421196.1 154686035 5462962 1606919..1607371 1 NC_009725.1 with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC 1607371 flgC 5462962 flgC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 flagellar basal body rod protein FlgC YP_001421196.1 1606919 D 326423 CDS YP_001421197.1 154686036 5461014 1607382..1607702 1 NC_009725.1 forms a junction between the M-ring and FlgB during flagella biosynthesis; flagellar hook-basal body protein FliE 1607702 fliE 5461014 fliE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 flagellar hook-basal body protein FliE YP_001421197.1 1607382 D 326423 CDS YP_001421198.1 154686037 5461015 1607745..1609355 1 NC_009725.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein 1609355 fliF 5461015 fliF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 flagellar MS-ring protein YP_001421198.1 1607745 D 326423 CDS YP_001421199.1 154686038 5461016 1609368..1610384 1 NC_009725.1 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G 1610384 fliG 5461016 fliG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 flagellar motor switch protein G YP_001421199.1 1609368 D 326423 CDS YP_001421200.1 154686039 5461017 1610506..1611132 1 NC_009725.1 binds to and inhibits the function of flagella specific ATPase FliI; flagellar assembly protein H 1611132 fliH 5461017 fliH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 flagellar assembly protein H YP_001421200.1 1610506 D 326423 CDS YP_001421201.1 154686040 5461018 1611129..1612445 1 NC_009725.1 involved in type III protein export during flagellum assembly; flagellum-specific ATP synthase 1612445 fliI 5461018 fliI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 flagellum-specific ATP synthase YP_001421201.1 1611129 D 326423 CDS YP_001421202.1 154686041 5461019 1612451..1612894 1 NC_009725.1 rod/hook and filament chaperone; flagellar biosynthesis chaperone 1612894 fliJ 5461019 fliJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 flagellar biosynthesis chaperone YP_001421202.1 1612451 D 326423 CDS YP_001421203.1 154686042 5462542 1612906..1613520 1 NC_009725.1 conserved hypothetical protein YlxF; hypothetical protein 1613520 ylxF 5462542 ylxF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421203.1 1612906 D 326423 CDS YP_001421204.1 154686043 5462543 1613527..1614873 1 NC_009725.1 flagellar hook-length control protein FliK; FliK 1614873 fliK 5462543 fliK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 FliK YP_001421204.1 1613527 D 326423 CDS YP_001421205.1 154686044 5462544 1614870..1615310 1 NC_009725.1 acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; flagellar basal body rod modification protein 1615310 flgD 5462544 flgD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 flagellar basal body rod modification protein YP_001421205.1 1614870 D 326423 CDS YP_001421206.1 154686045 5462545 1615335..1616111 1 NC_009725.1 makes up the distal portion of the flagellar basal body rod; flagellar basal body rod protein FlgG 1616111 flgG 5462545 flgG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 flagellar basal body rod protein FlgG YP_001421206.1 1615335 D 326423 CDS YP_001421207.1 154686046 5462546 1616151..1616366 1 NC_009725.1 hypothetical protein 1616366 5462546 RBAM_016130 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421207.1 1616151 D 326423 CDS YP_001421208.1 154686047 5462547 1616363..1616782 1 NC_009725.1 interacts with the cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring; flagellar basal body-associated protein FliL 1616782 fliL 5462547 fliL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 flagellar basal body-associated protein FliL YP_001421208.1 1616363 D 326423 CDS YP_001421209.1 154686048 5459769 1616816..1617814 1 NC_009725.1 with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; flagellar motor switch protein FliM 1617814 fliM 5459769 fliM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 flagellar motor switch protein FliM YP_001421209.1 1616816 D 326423 CDS YP_001421210.1 154686049 5459770 1617804..1618940 1 NC_009725.1 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein 1618940 fliY 5459770 fliY Bacillus amyloliquefaciens subsp. plantarum str. FZB42 flagellar motor switch protein YP_001421210.1 1617804 D 326423 CDS YP_001421211.1 154686050 5459771 1618967..1619329 1 NC_009725.1 two-component response regulator CheY; hypothetical protein 1619329 cheY 5459771 cheY Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421211.1 1618967 D 326423 CDS YP_001421212.1 154686051 5459772 1619344..1619997 1 NC_009725.1 possible structural component of the flagellum that anchors the rod to the membrane; flagella biosynthesis protein FliZ 1619997 fliZ 5459772 fliZ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 flagella biosynthesis protein FliZ YP_001421212.1 1619344 D 326423 CDS YP_001421213.1 154686052 5459773 1619990..1620655 1 NC_009725.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 1620655 fliP 5459773 fliP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 flagellar biosynthesis protein FliP YP_001421213.1 1619990 D 326423 CDS YP_001421214.1 154686053 5459774 1620670..1620939 1 NC_009725.1 with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliQ 1620939 fliQ 5459774 fliQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 flagellar biosynthesis protein FliQ YP_001421214.1 1620670 D 326423 CDS YP_001421215.1 154686054 5461980 1620946..1621725 1 NC_009725.1 FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliR 1621725 fliR 5461980 fliR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 flagellar biosynthesis protein FliR YP_001421215.1 1620946 D 326423 CDS YP_001421216.1 154686055 5461981 1621725..1622804 1 NC_009725.1 membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB 1622804 flhB 5461981 flhB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 flagellar biosynthesis protein FlhB YP_001421216.1 1621725 D 326423 CDS YP_001421217.1 154686056 5461982 1622838..1624871 1 NC_009725.1 membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 1624871 flhA 5461982 flhA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 flagellar biosynthesis protein FlhA YP_001421217.1 1622838 D 326423 CDS YP_001421218.1 154686057 5461983 1624871..1625962 1 NC_009725.1 positive regulator of class III flagellar genes; flagellar biosynthesis regulator FlhF 1625962 flhF 5461983 flhF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 flagellar biosynthesis regulator FlhF YP_001421218.1 1624871 D 326423 CDS YP_001421219.1 154686058 5461984 1625959..1626852 1 NC_009725.1 conserved hypothetical protein YlxH; hypothetical protein 1626852 ylxH 5461984 ylxH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421219.1 1625959 D 326423 CDS YP_001421220.1 154686059 5461985 1626849..1627916 1 NC_009725.1 chemotaxis response regulator; regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase 1627916 cheB 5461985 cheB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 chemotaxis-specific methylesterase YP_001421220.1 1626849 D 326423 CDS YP_001421221.1 154686060 5461619 1627928..1629940 1 NC_009725.1 two-component sensor histidine kinase; COG0643 Chemotaxis protein; cell motility and secretion/signal transduction mechanism; hypothetical protein 1629940 cheA 5461619 cheA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421221.1 1627928 D 326423 CDS YP_001421222.1 154686061 5461620 1629963..1630436 1 NC_009725.1 chemotaxis protein CheW; hypothetical protein 1630436 cheW 5461620 cheW Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421222.1 1629963 D 326423 CDS YP_001421223.1 154686062 5461621 1630452..1631081 1 NC_009725.1 chemotaxis protein CheC; hypothetical protein 1631081 cheC 5461621 cheC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421223.1 1630452 D 326423 CDS YP_001421224.1 154686063 5461622 1631078..1631578 1 NC_009725.1 catalyzes the conversion of glutamine residues to glutamate on methyl-accepting chemotaxis receptors; chemoreceptor glutamine deamidase CheD 1631578 cheD 5461622 cheD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 chemoreceptor glutamine deamidase CheD YP_001421224.1 1631078 D 326423 CDS YP_001421225.1 154686064 5461623 1631605..1632369 1 NC_009725.1 expressed in late exponential phase; controls the expression of genes coding cell surface proteins involved in chemotaxis, flagellar assembly, and autolysis; RNA polymerase sigma factor SigD 1632369 sigD 5461623 sigD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 RNA polymerase sigma factor SigD YP_001421225.1 1631605 D 326423 CDS YP_001421226.1 154686065 5461624 1632397..1632864 1 NC_009725.1 swarming motility protein; SwrB 1632864 swrB 5461624 swrB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SwrB YP_001421226.1 1632397 D 326423 CDS YP_001421227.1 154686066 5459682 1633008..1633748 1 NC_009725.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 1633748 rpsB 5459682 rpsB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 30S ribosomal protein S2 YP_001421227.1 1633008 D 326423 CDS YP_001421228.1 154686067 5459683 1633848..1634729 1 NC_009725.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 1634729 tsf 5459683 tsf Bacillus amyloliquefaciens subsp. plantarum str. FZB42 elongation factor Ts YP_001421228.1 1633848 D 326423 CDS YP_001421229.1 154686068 5459684 1634875..1635597 1 NC_009725.1 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 1635597 pyrH 5459684 pyrH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 uridylate kinase YP_001421229.1 1634875 D 326423 CDS YP_001421230.1 154686069 5459685 1635600..1636157 1 NC_009725.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 1636157 frr 5459685 frr Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ribosome recycling factor YP_001421230.1 1635600 D 326423 CDS YP_001421231.1 154686070 5459686 1636283..1637065 1 NC_009725.1 catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate; undecaprenyl pyrophosphate synthase 1637065 uppS 5459686 uppS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 undecaprenyl pyrophosphate synthase YP_001421231.1 1636283 D 326423 CDS YP_001421232.1 154686071 5459687 1637078..1637866 1 NC_009725.1 phosphatidate cytidylyltransferase (CDP-diglyceride synthase) CdsA; hypothetical protein 1637866 cdsA 5459687 cdsA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421232.1 1637078 D 326423 CDS YP_001421233.1 154686072 5461383 1637922..1639073 1 NC_009725.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1639073 dxr 5461383 dxr Bacillus amyloliquefaciens subsp. plantarum str. FZB42 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_001421233.1 1637922 D 326423 CDS YP_001421234.1 154686073 5461384 1639086..1640348 1 NC_009725.1 zinc metalloprotease YluC; hypothetical protein 1640348 yluC 5461384 yluC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421234.1 1639086 D 326423 CDS YP_001421235.1 154686074 5461385 1640380..1642074 1 NC_009725.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 1642074 proS 5461385 proS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 prolyl-tRNA synthetase YP_001421235.1 1640380 D 326423 CDS YP_001421236.1 154686075 5461386 1642186..1646499 1 NC_009725.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; required for leading strand synthesis; PolC exhibits 3' to 5' exonuclease activity; DNA polymerase III PolC 1646499 polC 5461386 polC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DNA polymerase III PolC YP_001421236.1 1642186 D 326423 CDS YP_001421237.1 154686076 5461387 1646739..1647209 1 NC_009725.1 in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein 1647209 ylxS 5461387 ylxS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421237.1 1646739 D 326423 CDS YP_001421238.1 154686077 5461388 1647249..1648370 1 NC_009725.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 1648370 nusA 5461388 nusA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 transcription elongation factor NusA YP_001421238.1 1647249 D 326423 CDS YP_001421239.1 154686078 5460776 1648384..1648659 1 NC_009725.1 conserved hypothetical protein YlxR; hypothetical protein 1648659 ylxR 5460776 ylxR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421239.1 1648384 D 326423 CDS YP_001421240.1 154686079 5460777 1648661..1648963 1 NC_009725.1 ribosomal protein L7AE family YlxQ; hypothetical protein 1648963 ylxQ 5460777 ylxQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421240.1 1648661 D 326423 CDS YP_001421241.1 154686080 5460778 1648983..1651133 1 NC_009725.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 1651133 infB 5460778 infB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 translation initiation factor IF-2 YP_001421241.1 1648983 D 326423 CDS YP_001421242.1 154686081 5460779 1651130..1651408 1 NC_009725.1 conserved hypothetical protein YlxP; hypothetical protein 1651408 ylxP 5460779 ylxP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421242.1 1651130 D 326423 CDS YP_001421243.1 154686082 5460780 1651431..1651778 1 NC_009725.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 1651778 rbfA 5460780 rbfA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ribosome-binding factor A YP_001421243.1 1651431 D 326423 CDS YP_001421244.1 154686083 5460781 1651863..1652792 1 NC_009725.1 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 1652792 truB 5460781 truB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 tRNA pseudouridine synthase B YP_001421244.1 1651863 D 326423 CDS YP_001421245.1 154686084 5460064 1652812..1653753 1 NC_009725.1 catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase 1653753 ribC 5460064 ribC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 bifunctional riboflavin kinase/FMN adenylyltransferase YP_001421245.1 1652812 D 326423 CDS YP_001421246.1 154686085 5460065 1653919..1654188 1 NC_009725.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 1654188 rpsO 5460065 rpsO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 30S ribosomal protein S15 YP_001421246.1 1653919 D 326423 CDS YP_001421247.1 154686086 5460066 1654363..1656486 1 NC_009725.1 polynucleotide phosphorylase (PNPase) PnpA; polynucleotide phosphorylase 1656486 pnpA 5460066 pnpA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 polynucleotide phosphorylase YP_001421247.1 1654363 D 326423 CDS YP_001421248.1 154686087 5460067 1656599..1657558 1 NC_009725.1 deacetylase YlxY; hypothetical protein 1657558 ylxY 5460067 ylxY Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421248.1 1656599 D 326423 CDS YP_001421249.1 154686088 5460068 1657599..1658834 1 NC_009725.1 zinc protease MlpA; MlpA 1658834 mlpA 5460068 mlpA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 MlpA YP_001421249.1 1657599 D 326423 CDS YP_001421250.1 154686089 5460069 1658913..1659170 1 NC_009725.1 conserved hypothetical protein YmxH; hypothetical protein 1659170 ymxH 5460069 ymxH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421250.1 1658913 D 326423 CDS YP_001421251.1 154686090 5459693 1659328..1660218 1 NC_009725.1 catalyzes the synthesis of dipicolinic acid from dihydroxydipicolinic acid; plays a role in spore heat resistance; dipicolinate synthase subunit A 1660218 spoVFA 5459693 spoVFA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 dipicolinate synthase subunit A YP_001421251.1 1659328 D 326423 CDS YP_001421252.1 154686091 5459694 1660221..1660811 1 NC_009725.1 involved in production of dipicolinic acid (pyridine-2,6-dicarboxylic acid, DPA) which is synthesized late in sporulation in the mother cell and accumulates in the spore; mutations in this gene result in a lack of DPA synthesis; presumably functions with SpoVFA to form the synthase enzyme; dipicolinate synthase subunit B 1660811 spoVFB 5459694 spoVFB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 dipicolinate synthase subunit B YP_001421252.1 1660221 D 326423 CDS YP_001421253.1 154686092 5459695 1660946..1661986 1 NC_009725.1 catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase 1661986 asd 5459695 asd Bacillus amyloliquefaciens subsp. plantarum str. FZB42 aspartate-semialdehyde dehydrogenase YP_001421253.1 1660946 D 326423 CDS YP_001421254.1 154686093 5459696 1662074..1663288 1 NC_009725.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; diaminopimelate sensitive; aspartate kinase 1663288 dapG 5459696 dapG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 aspartate kinase YP_001421254.1 1662074 D 326423 CDS YP_001421255.1 154686094 5459697 1663319..1664188 1 NC_009725.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 1664188 dapA 5459697 dapA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 dihydrodipicolinate synthase YP_001421255.1 1663319 D 326423 CDS YP_001421256.1 154686095 5459698 1664367..1666034 1 NC_009725.1 conserved hypothetical protein YmfA; hypothetical protein 1666034 ymfA 5459698 ymfA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421256.1 1664367 D 326423 CDS YP_001421257.1 154686096 5461907 1666150..1666887 1 NC_009725.1 translocation-enhancing protein TepA; TepA 1666887 tepA 5461907 tepA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 TepA YP_001421257.1 1666150 D 326423 CDS YP_001421258.1 154686097 5461908 1666884..1667093 1 NC_009725.1 hypothetical protein 1667093 5461908 RBAM_016640 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421258.1 1666884 D 326423 CDS YP_001421259.1 154686098 5461909 1667228..1669588 1 NC_009725.1 DNA translocase FtsK; hypothetical protein 1669588 ftsK 5461909 ftsK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421259.1 1667228 D 326423 CDS YP_001421260.1 154686099 5461910 1669713..1670438 1 NC_009725.1 hypothetical transcriptional regulator YmfC; hypothetical protein 1670438 ymfC 5461910 ymfC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421260.1 1669713 D 326423 CDS YP_001421261.1 154686100 5461911 1670451..1671779 1 NC_009725.1 hypothetical protein 1671779 5461911 RBAM_016670 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421261.1 1670451 D 326423 CDS YP_001421262.1 154686101 5461912 1671885..1672340 1 NC_009725.1 hypothetical protein 1672340 5461912 RBAM_016680 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421262.1 1671885 D 326423 CDS YP_001421263.1 154686102 5462435 1672340..1675459 1 NC_009725.1 hypothetical protein 1675459 5462435 RBAM_016690 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421263.1 1672340 D 326423 CDS YP_001421264.1 154686103 5462436 1675611..1676891 1 NC_009725.1 hypothetical protein 1676891 5462436 RBAM_016700 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421264.1 1675611 D 326423 CDS YP_001421265.1 154686104 5462437 1676888..1678174 1 NC_009725.1 conserved hypothetical protein YmfH; hypothetical protein 1678174 ymfH 5462437 ymfH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421265.1 1676888 D 326423 CDS YP_001421266.1 154686105 5462438 1678234..1678962 1 NC_009725.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 1678962 fabG 5462438 fabG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 3-ketoacyl-ACP reductase YP_001421266.1 1678234 D 326423 CDS YP_001421267.1 154686106 5462439 1679038..1679295 1 NC_009725.1 hypothetical protein YmfJ; hypothetical protein 1679295 ymfJ 5462439 ymfJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421267.1 1679038 D 326423 CDS YP_001421268.1 154686107 5462440 1679426..1680217 1 NC_009725.1 hypothetical protein 1680217 5462440 RBAM_016740 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421268.1 1679426 D 326423 CDS YP_001421269.1 154686108 5460573 1680284..1681132 1 NC_009725.1 conserved hypothetical protein YmfM; hypothetical protein 1681132 ymfM 5460573 ymfM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421269.1 1680284 D 326423 CDS YP_001421270.1 154686109 5460574 1681205..1681786 1 NC_009725.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase PgsA; hypothetical protein 1681786 pgsA 5460574 pgsA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421270.1 1681205 D 326423 CDS YP_001421271.1 154686110 5460575 1681804..1683054 1 NC_009725.1 competence-damage inducible protein CinA; competence damage-inducible protein A 1683054 cinA 5460575 cinA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 competence damage-inducible protein A YP_001421271.1 1681804 D 326423 CDS YP_001421272.1 154686111 5460576 1683225..1684268 1 NC_009725.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 1684268 recA 5460576 recA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 recombinase A YP_001421272.1 1683225 D 326423 CDS YP_001421273.1 154686112 5460577 1684436..1685617 1 NC_009725.1 penicillin-binding protein PbpX; PbpX 1685617 pbpX 5460577 pbpX Bacillus amyloliquefaciens subsp. plantarum str. FZB42 PbpX YP_001421273.1 1684436 D 326423 CDS YP_001421274.1 154686113 5460578 1685910..1687469 1 NC_009725.1 protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP; phosphodiesterase 1687469 ymdA 5460578 ymdA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 phosphodiesterase YP_001421274.1 1685910 D 326423 CDS YP_001421275.1 154686114 5462065 1687530..1688324 1 NC_009725.1 conserved hypothetical protein YmdB; hypothetical protein 1688324 ymdB 5462065 ymdB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421275.1 1687530 D 326423 CDS YP_001421276.1 154686115 5462066 1688524..1688784 1 NC_009725.1 stage V sporulation protein S (SpoVS); hypothetical protein 1688784 spoVS 5462066 spoVS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421276.1 1688524 D 326423 CDS YP_001421277.1 154686116 5462067 1689045..1690088 1 NC_009725.1 converts threonine and NAD to 1,2-amino-3-oxobutanoate and NADH; functions in threonine catabolism; L-threonine 3-dehydrogenase 1690088 tdh 5462067 tdh Bacillus amyloliquefaciens subsp. plantarum str. FZB42 L-threonine 3-dehydrogenase YP_001421277.1 1689045 D 326423 CDS YP_001421278.1 154686117 5462068 1690104..1691279 1 NC_009725.1 catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine; 2-amino-3-ketobutyrate CoA ligase 1691279 kbl 5462068 kbl Bacillus amyloliquefaciens subsp. plantarum str. FZB42 2-amino-3-ketobutyrate CoA ligase YP_001421278.1 1690104 D 326423 CDS YP_001421279.1 154686118 5462069 1691422..1692951 1 NC_009725.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 1692951 ymcB 5462069 ymcB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 (dimethylallyl)adenosine tRNA methylthiotransferase YP_001421279.1 1691422 D 326423 CDS YP_001421280.1 154686119 5462070 1692954..1693385 1 NC_009725.1 conserved hypothetical protein; control of community development; hypothetical protein 1693385 ymcA 5462070 ymcA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421280.1 1692954 D 326423 CDS YP_001421281.1 154686120 5460075 1693638..1694183 1 NC_009725.1 outer spore coat protein CotE; CotE 1694183 cotE 5460075 cotE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 CotE YP_001421281.1 1693638 D 326423 CDS YP_001421282.1 154686121 5460076 1694299..1696887 1 NC_009725.1 This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 1696887 mutS 5460076 mutS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DNA mismatch repair protein MutS YP_001421282.1 1694299 D 326423 CDS YP_001421283.1 154686122 5460077 1696903..1698777 1 NC_009725.1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein 1698777 mutL 5460077 mutL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DNA mismatch repair protein YP_001421283.1 1696903 D 326423 CDS YP_001421284.1 154686123 5460078 1700345..1701022 1 NC_009725.1 bacillaene synthesis; hydroxyacylglutathione hydrolase; BaeB 1701022 baeB 5460078 baeB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 BaeB YP_001421284.1 1700345 D 326423 CDS YP_001421285.1 154686124 5460079 1701337..1702206 1 NC_009725.1 bacillaene synthesis; malonyl-CoA-[acyl-carrier-protein] transacylase [AT]; BaeC 1702206 baeC 5460079 baeC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 BaeC YP_001421285.1 1701337 D 326423 CDS YP_001421286.1 154686125 5460080 1702343..1703317 1 NC_009725.1 bacillaene synthesis; malonyl-CoA-[acyl-carrier-protein] transacylase [AT]/oxidoreductase [OR]; BaeD 1703317 baeD 5460080 baeD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 BaeD YP_001421286.1 1702343 D 326423 CDS YP_001421287.1 154686126 5462446 1703319..1705559 1 NC_009725.1 bacillaene synthesis; malonyl-CoA-[acyl-carrier protein] transacylase [AT]/oxidoreductase [OR]; BaeE 1705559 baeE 5462446 baeE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 BaeE YP_001421287.1 1703319 D 326423 CDS YP_001421288.1 154686127 5462447 1705625..1705873 1 NC_009725.1 bacillaene synthesis; Acyl carrier proteins are involved in the biosynthetic pathways of fatty acids, phospholipids, lipopolysaccharides, and oligosaccharides; this ACP may be involved in the biosynthesis of lipopeptide antibiotics; acyl carrier protein 1705873 acpK 5462447 acpK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 acyl carrier protein YP_001421288.1 1705625 D 326423 CDS YP_001421289.1 154686128 5462448 1705925..1707187 1 NC_009725.1 bacillaene synthesis; 3-hydroxy-3-methylglutaryl CoA synthase; BaeG 1707187 baeG 5462448 baeG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 BaeG YP_001421289.1 1705925 D 326423 CDS YP_001421290.1 154686129 5462449 1707184..1707957 1 NC_009725.1 bacillaene synthesis; involved in polyketide synthesis; polyketide biosynthesis enoyl-CoA hydratase 1707957 baeH 5462449 baeH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 polyketide biosynthesis enoyl-CoA hydratase YP_001421290.1 1707184 D 326423 CDS YP_001421291.1 154686130 5462450 1707967..1708716 1 NC_009725.1 bacillaene synthesis; involved in polyketide production; polyketide biosynthesis enoyl-CoA hydratase 1708716 baeI 5462450 baeI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 polyketide biosynthesis enoyl-CoA hydratase YP_001421291.1 1707967 D 326423 CDS YP_001421292.1 154686131 5462451 1708756..1723704 1 NC_009725.1 bacillaene synthesis; hybrid NRPS/PKS protein; BaeJ 1723704 baeJ 5462451 baeJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 BaeJ YP_001421292.1 1708756 D 326423 CDS YP_001421293.1 154686132 5461785 1723706..1737133 1 NC_009725.1 bacillaene synthesis; polyketide synthase of type I; BaeL 1737133 baeL 5461785 baeL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 BaeL YP_001421293.1 1723706 D 326423 CDS YP_001421294.1 154686133 5461786 1737151..1747686 1 NC_009725.1 bacillaene synthesis; polyketide synthase of type I; BaeM 1747686 baeM 5461786 baeM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 BaeM YP_001421294.1 1737151 D 326423 CDS YP_001421295.1 154686134 5461787 1747676..1763977 1 NC_009725.1 bacillaene synthesis; hybrid NRPS/PKS protein; BaeN 1763977 baeN 5461787 baeN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 BaeN YP_001421295.1 1747676 D 326423 CDS YP_001421296.1 154686135 5461788 1763991..1771439 1 NC_009725.1 bacillaene synthesis; polyketide synthase of type I; BaeR 1771439 baeR 5461788 baeR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 BaeR YP_001421296.1 1763991 D 326423 CDS YP_001421297.1 154686136 5461789 complement(1771576..1772787) 1 NC_009725.1 bacillaene synthesis; cytochrome P450 'oxidase' 107K1; hypothetical protein 1772787 baeS 5461789 baeS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421297.1 1771576 R 326423 CDS YP_001421298.1 154686137 5461790 1773076..1773510 1 NC_009725.1 sporulation-specific extracellular nuclease precursor NucB; NucB 1773510 nucB 5461790 nucB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 NucB YP_001421298.1 1773076 D 326423 CDS YP_001421299.1 154686138 5460795 1773630..1774325 1 NC_009725.1 conserved membrane protein YoaK; hypothetical protein 1774325 yoaK 5460795 yoaK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421299.1 1773630 D 326423 CDS YP_001421300.1 154686139 5460796 complement(1774359..1774721) 1 NC_009725.1 hypothetical protein YmzB; hypothetical protein 1774721 ymzB 5460796 ymzB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421300.1 1774359 R 326423 CDS YP_001421301.1 154686140 5460797 complement(1774914..1776242) 1 NC_009725.1 intracellular alkaline serine proteinase AprX; AprX 1776242 aprX 5460797 aprX Bacillus amyloliquefaciens subsp. plantarum str. FZB42 AprX YP_001421301.1 1774914 R 326423 CDS YP_001421302.1 154686141 5460798 1776910..1777617 1 NC_009725.1 phage- replication protein homolog YmaC; hypothetical protein 1777617 ymaC 5460798 ymaC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421302.1 1776910 D 326423 CDS YP_001421303.1 154686142 5460799 1777677..1778129 1 NC_009725.1 conserved hypothetical protein YmaD; hypothetical protein 1778129 ymaD 5460799 ymaD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421303.1 1777677 D 326423 CDS YP_001421304.1 154686143 5460800 complement(1778143..1778496) 1 NC_009725.1 multidrug resistance protein EbrB; EbrB 1778496 ebrB 5460800 ebrB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 EbrB YP_001421304.1 1778143 R 326423 CDS YP_001421305.1 154686144 5462530 complement(1778514..1778828) 1 NC_009725.1 multidrug resistance protein EbrA; EbrA 1778828 ebrA 5462530 ebrA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 EbrA YP_001421305.1 1778514 R 326423 CDS YP_001421306.1 154686145 5462531 1779374..1779778 1 NC_009725.1 hypothetical protein YmaF; hypothetical protein 1779778 ymaF 5462531 ymaF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421306.1 1779374 D 326423 CDS YP_001421307.1 154686146 5462532 1779877..1780821 1 NC_009725.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 1780821 miaA 5462532 miaA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 tRNA delta(2)-isopentenylpyrophosphate transferase YP_001421307.1 1779877 D 326423 CDS YP_001421308.1 154686147 5462533 1780861..1781082 1 NC_009725.1 Stimulates the elongation of poly(A) tails; RNA-binding protein Hfq 1781082 hfq 5462533 hfq Bacillus amyloliquefaciens subsp. plantarum str. FZB42 RNA-binding protein Hfq YP_001421308.1 1780861 D 326423 CDS YP_001421309.1 154686148 5462534 1781181..1781456 1 NC_009725.1 hypothetical protein YmzC; hypothetical protein 1781456 ymzC 5462534 ymzC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421309.1 1781181 D 326423 CDS YP_001421310.1 154686149 5462535 1781539..1781754 1 NC_009725.1 hypothetical protein YmzA; hypothetical protein 1781754 ymzA 5462535 ymzA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421310.1 1781539 D 326423 CDS YP_001421311.1 154686150 5460895 1782014..1782406 1 NC_009725.1 in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF; ribonucleotide reductase stimulatory protein 1782406 nrdI 5460895 nrdI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ribonucleotide reductase stimulatory protein YP_001421311.1 1782014 D 326423 CDS YP_001421312.1 154686151 5460896 1782366..1784468 1 NC_009725.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 1784468 nrdE 5460896 nrdE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ribonucleotide-diphosphate reductase subunit alpha YP_001421312.1 1782366 D 326423 CDS YP_001421313.1 154686152 5460897 1784486..1785475 1 NC_009725.1 B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE; ribonucleotide-diphosphate reductase subunit beta 1785475 nrdF 5460897 nrdF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ribonucleotide-diphosphate reductase subunit beta YP_001421313.1 1784486 D 326423 CDS YP_001421314.1 154686153 5460898 1785524..1786144 1 NC_009725.1 conserved hypothetical protein YmaB; hypothetical protein 1786144 ymaB 5460898 ymaB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421314.1 1785524 D 326423 CDS YP_001421315.1 154686154 5460899 complement(1786194..1786952) 1 NC_009725.1 sporulation-specific N-acetylmuramoyl-L-alanine amidase CwlC; hypothetical protein 1786952 cwlC 5460899 cwlC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421315.1 1786194 R 326423 CDS YP_001421316.1 154686155 5460900 1787262..1788227 1 NC_009725.1 spore formation protein SpoVK; hypothetical protein 1788227 spoVK 5460900 spoVK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421316.1 1787262 D 326423 CDS YP_001421317.1 154686156 5461170 1788357..1789619 1 NC_009725.1 GTP-binding protein YnbA; hypothetical protein 1789619 ynbA 5461170 ynbA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421317.1 1788357 D 326423 CDS YP_001421318.1 154686157 5461171 1789636..1790901 1 NC_009725.1 conserved hypothetical protein YnbB; hypothetical protein 1790901 ynbB 5461171 ynbB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421318.1 1789636 D 326423 CDS YP_001421319.1 154686158 5461172 1791011..1791415 1 NC_009725.1 glutamine synthetase transcription repressor GlnR; GlnR 1791415 glnR 5461172 glnR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GlnR YP_001421319.1 1791011 D 326423 CDS YP_001421320.1 154686159 5461173 1791473..1792807 1 NC_009725.1 glutamine synthetase GlnA; hypothetical protein 1792807 glnA 5461173 glnA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421320.1 1791473 D 326423 CDS YP_001421321.1 154686160 5461174 complement(1793113..1793382) 1 NC_009725.1 hypothetical protein 1793382 5461174 RBAM_017270 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421321.1 1793113 R 326423 CDS YP_001421322.1 154686161 5461175 1793403..1793681 1 NC_009725.1 hypothetical protein 1793681 5461175 RBAM_017280 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421322.1 1793403 D 326423 CDS YP_001421323.1 154686162 5462372 1793857..1794405 1 NC_009725.1 hypothetical protein 1794405 5462372 RBAM_017290 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421323.1 1793857 D 326423 CDS YP_001421324.1 154686163 5462373 complement(1794624..1794860) 1 NC_009725.1 hypothetical protein 1794860 5462373 RBAM_017300 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421324.1 1794624 R 326423 CDS YP_001421325.1 154686164 5462374 complement(1795191..1796285) 1 NC_009725.1 hypothetical protein 1796285 5462374 RBAM_017310 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421325.1 1795191 R 326423 CDS YP_001421326.1 154686165 5462375 1796850..1798241 1 NC_009725.1 hypothetical symporter; transport of oligosaccharides; hypothetical protein 1798241 xynP 5462375 xynP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421326.1 1796850 D 326423 CDS YP_001421327.1 154686166 5462376 1798284..1799885 1 NC_009725.1 xylan beta-1,4-xylosidase; hypothetical protein 1799885 xynB 5462376 xynB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421327.1 1798284 D 326423 CDS YP_001421328.1 154686167 5462377 complement(1800029..1801183) 1 NC_009725.1 xylose operon repressor protein XylR; hypothetical protein 1801183 xylR 5462377 xylR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421328.1 1800029 R 326423 CDS YP_001421329.1 154686168 5462631 1801447..1802784 1 NC_009725.1 catalyzes the interconversion of D-xylose to D-xylulose; xylose isomerase 1802784 xylA 5462631 xylA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 xylose isomerase YP_001421329.1 1801447 D 326423 CDS YP_001421330.1 154686169 5462632 1802916..1804415 1 NC_009725.1 xylulose kinase XylB; hypothetical protein 1804415 xylB 5462632 xylB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421330.1 1802916 D 326423 CDS YP_001421331.1 154686170 5462633 1804590..1807187 1 NC_009725.1 phosphoenolpyruvate synthase Pps; phosphoenolpyruvate synthase 1807187 pps 5462633 pps Bacillus amyloliquefaciens subsp. plantarum str. FZB42 phosphoenolpyruvate synthase YP_001421331.1 1804590 D 326423 CDS YP_001421332.1 154686171 5462634 1807463..1807945 1 NC_009725.1 hypothetical protein 1807945 5462634 RBAM_017380 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421332.1 1807463 D 326423 CDS YP_001421333.1 154686172 5462635 1808220..1808510 1 NC_009725.1 hypothetical protein 1808510 5462635 RBAM_017390 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421333.1 1808220 D 326423 CDS YP_001421334.1 154686173 5462636 complement(1808517..1808939) 1 NC_009725.1 hypothetical protein 1808939 5462636 RBAM_017400 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421334.1 1808517 R 326423 CDS YP_001421335.1 154686174 5460268 1809412..1809597 1 NC_009725.1 hypothetical protein 1809597 5460268 RBAM_017410 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421335.1 1809412 D 326423 CDS YP_001421336.1 154686175 5460269 complement(1809646..1809813) 1 NC_009725.1 hypothetical protein 1809813 5460269 RBAM_017420 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421336.1 1809646 R 326423 CDS YP_001421337.1 154686176 5460270 1810064..1810393 1 NC_009725.1 nuclease inhibitor (dinB like protein) 1810393 5460270 RBAM_017430 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 nuclease inhibitor (dinB like protein) YP_001421337.1 1810064 D 326423 CDS YP_001421338.1 154686177 5460271 complement(1810556..1811572) 1 NC_009725.1 similar to zinc-dependent eukaryotic ADH enzymes and distinct from fermentative ADHs; alcohol dehydrogenase 1811572 5460271 RBAM_017440 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 alcohol dehydrogenase YP_001421338.1 1810556 R 326423 CDS YP_001421339.1 154686178 5460272 1811760..1812005 1 NC_009725.1 hypothetical protein YoaW; hypothetical protein 1812005 yoaW 5460272 yoaW Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421339.1 1811760 D 326423 CDS YP_001421340.1 154686179 5460273 1812185..1812601 1 NC_009725.1 hypothetical protein YopD; YopD 1812601 yopD 5460273 yopD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 YopD YP_001421340.1 1812185 D 326423 CDS YP_001421341.1 154686180 5460763 1812703..1813464 1 NC_009725.1 hypothetical protein YoaP; hypothetical protein 1813464 yoaP 5460763 yoaP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421341.1 1812703 D 326423 CDS YP_001421342.1 154686181 5460764 1813696..1814238 1 NC_009725.1 hypothetical protein 1814238 5460764 RBAM_017480 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421342.1 1813696 D 326423 CDS YP_001421343.1 154686182 5460765 1814302..1814754 1 NC_009725.1 hypothetical protein 1814754 5460765 RBAM_017490 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421343.1 1814302 D 326423 CDS YP_001421344.1 154686183 5460766 1814884..1815363 1 NC_009725.1 hypothetical protein YoaO; hypothetical protein 1815363 yoaO 5460766 yoaO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421344.1 1814884 D 326423 CDS YP_001421345.1 154686184 5460767 complement(1815410..1815637) 1 NC_009725.1 hypothetical protein 1815637 5460767 RBAM_017510 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421345.1 1815410 R 326423 CDS YP_001421346.1 154686185 5460768 1815922..1816542 1 NC_009725.1 hypothetical protein YnaE; hypothetical protein 1816542 ynaE 5460768 ynaE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421346.1 1815922 D 326423 CDS YP_001421347.1 154686186 5460174 1816767..1817840 1 NC_009725.1 hypothetical protein 1817840 5460174 RBAM_017530 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421347.1 1816767 D 326423 CDS YP_001421348.1 154686187 5460175 1818048..1818668 1 NC_009725.1 chitin binding protein 1818668 5460175 RBAM_017540 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 chitin binding protein YP_001421348.1 1818048 D 326423 CDS YP_001421349.1 154686188 5460176 complement(1819023..1819313) 1 NC_009725.1 hypothetical protein 1819313 5460176 RBAM_017550 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421349.1 1819023 R 326423 CDS YP_001421350.1 154686189 5460177 complement(1819317..1819649) 1 NC_009725.1 hypothetical protein 1819649 5460177 RBAM_017560 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421350.1 1819317 R 326423 CDS YP_001421351.1 154686190 5460178 complement(1819712..1820248) 1 NC_009725.1 hypothetical protein 1820248 5460178 RBAM_017570 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421351.1 1819712 R 326423 CDS YP_001421352.1 154686191 5460179 complement(1820534..1820719) 1 NC_009725.1 hypothetical protein 1820719 5460179 RBAM_017580 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421352.1 1820534 R 326423 CDS YP_001421353.1 154686192 5460814 complement(1820888..1823305) 1 NC_009725.1 conserved hypothetical protein YobO; hypothetical protein 1823305 yobO 5460814 yobO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421353.1 1820888 R 326423 CDS YP_001421354.1 154686193 5460815 1823685..1824119 1 NC_009725.1 deoxyuridine 5`-triphosphate pyrophosphatase YncF; hypothetical protein 1824119 yncF 5460815 yncF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421354.1 1823685 D 326423 CDS YP_001421355.1 154686194 5460816 1824529..1825350 1 NC_009725.1 conserved hypothetical protein YndL; hypothetical protein 1825350 yndL 5460816 yndL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421355.1 1824529 D 326423 CDS YP_001421356.1 154686195 5460817 1825595..1826425 1 NC_009725.1 hypothetical protein 1826425 5460817 RBAM_017620 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421356.1 1825595 D 326423 CDS YP_001421357.1 154686196 5460818 complement(1826453..1826902) 1 NC_009725.1 hypothetical protein YndM; hypothetical protein 1826902 yndM 5460818 yndM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421357.1 1826453 R 326423 CDS YP_001421358.1 154686197 5460819 1827056..1827484 1 NC_009725.1 hypothetical protein 1827484 5460819 RBAM_017640 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421358.1 1827056 D 326423 CDS YP_001421359.1 154686198 5461606 complement(1827822..1828442) 1 NC_009725.1 Represses a number of genes involved in the response to DNA damage; LexA repressor 1828442 lexA 5461606 lexA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 LexA repressor YP_001421359.1 1827822 R 326423 CDS YP_001421360.1 154686199 5461607 1828599..1828910 1 NC_009725.1 hypothetical protein YneA; cell division suppressor protein YneA 1828910 yneA 5461607 yneA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 cell division suppressor protein YneA YP_001421360.1 1828599 D 326423 CDS YP_001421361.1 154686200 5461608 1828926..1829576 1 NC_009725.1 conserved hypothetical protein YneB; hypothetical protein 1829576 yneB 5461608 yneB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421361.1 1828926 D 326423 CDS YP_001421362.1 154686201 5461609 1829645..1829878 1 NC_009725.1 conserved hypothetical protein YnzC; hypothetical protein 1829878 ynzC 5461609 ynzC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421362.1 1829645 D 326423 CDS YP_001421363.1 154686202 5461610 1830045..1832048 1 NC_009725.1 transketolase Tkt; Tkt 1832048 tkt 5461610 tkt Bacillus amyloliquefaciens subsp. plantarum str. FZB42 Tkt YP_001421363.1 1830045 D 326423 CDS YP_001421364.1 154686203 5461611 1832200..1832646 1 NC_009725.1 hypothetical protein YneE; hypothetical protein 1832646 yneE 5461611 yneE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421364.1 1832200 D 326423 CDS YP_001421365.1 154686204 5459515 1832732..1832950 1 NC_009725.1 conserved hypothetical protein YneF; hypothetical protein 1832950 yneF 5459515 yneF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421365.1 1832732 D 326423 CDS YP_001421366.1 154686205 5459516 complement(1833024..1833197) 1 NC_009725.1 hypothetical protein YnzD; hypothetical protein 1833197 ynzD 5459516 ynzD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421366.1 1833024 R 326423 CDS YP_001421367.1 154686206 5459517 1833402..1834106 1 NC_009725.1 integral membrane protein cytochrome c-type biogenesis protein CcdA; hypothetical protein 1834106 ccdA 5459517 ccdA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421367.1 1833402 D 326423 CDS YP_001421368.1 154686207 5459518 1834191..1834553 1 NC_009725.1 conserved hypothetical protein CcdB; hypothetical protein 1834553 ccdB 5459518 ccdB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421368.1 1834191 D 326423 CDS YP_001421369.1 154686208 5459519 1834642..1835124 1 NC_009725.1 conserved hypothetical protein CcdC; CcdC 1835124 ccdC 5459519 ccdC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 CcdC YP_001421369.1 1834642 D 326423 CDS YP_001421370.1 154686209 5459520 complement(1835152..1835580) 1 NC_009725.1 hypothetical protein YneK; hypothetical protein 1835580 yneK 5459520 yneK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421370.1 1835152 R 326423 CDS YP_001421371.1 154686210 5460737 complement(1835815..1836186) 1 NC_009725.1 spore coat protein M (CotM); CotM 1836186 cotM 5460737 cotM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 CotM YP_001421371.1 1835815 R 326423 CDS YP_001421372.1 154686211 5460738 complement(1836280..1836426) 1 NC_009725.1 SASP P; found in forespore compartment; acid-soluble spore protein P 1836426 sspP 5460738 sspP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 acid-soluble spore protein P YP_001421372.1 1836280 R 326423 CDS YP_001421373.1 154686212 5460739 complement(1836456..1836602) 1 NC_009725.1 SASP O; found in forespore compartment; acid-soluble spore protein O 1836602 sspO 5460739 sspO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 acid-soluble spore protein O YP_001421373.1 1836456 R 326423 CDS YP_001421374.1 154686213 5460740 1836834..1839560 1 NC_009725.1 Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 1839560 citB 5460740 citB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 aconitate hydratase YP_001421374.1 1836834 D 326423 CDS YP_001421375.1 154686214 5460741 1839622..1840131 1 NC_009725.1 conserved hypothetical protein YneN; hypothetical protein 1840131 yneN 5460741 yneN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421375.1 1839622 D 326423 CDS YP_001421376.1 154686215 5460742 1840210..1840335 1 NC_009725.1 hypothetical protein 1840335 5460742 RBAM_017820 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421376.1 1840210 D 326423 CDS YP_001421377.1 154686216 5462053 1840399..1840545 1 NC_009725.1 SASP N; found in forespore compartment; acid-soluble spore protein N 1840545 sspN 5462053 sspN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 acid-soluble spore protein N YP_001421377.1 1840399 D 326423 CDS YP_001421378.1 154686217 5462054 1840570..1840812 1 NC_009725.1 small acid-soluble spore protein (thioredoxin-like protein) Tlp; small acid-soluble spore protein Tlp 1840812 tlp 5462054 tlp Bacillus amyloliquefaciens subsp. plantarum str. FZB42 small acid-soluble spore protein Tlp YP_001421378.1 1840570 D 326423 CDS YP_001421379.1 154686218 5462055 1840899..1841315 1 NC_009725.1 conserved hypothetical protein YneP; hypothetical protein 1841315 yneP 5462055 yneP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421379.1 1840899 D 326423 CDS YP_001421380.1 154686219 5462056 1841331..1841630 1 NC_009725.1 hypothetical protein YneQ; hypothetical protein 1841630 yneQ 5462056 yneQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421380.1 1841331 D 326423 CDS YP_001421381.1 154686220 5462057 complement(1841664..1841951) 1 NC_009725.1 conserved hypothetical protein YneR; hypothetical protein 1841951 yneR 5462057 yneR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421381.1 1841664 R 326423 CDS YP_001421382.1 154686221 5462058 complement(1842040..1842621) 1 NC_009725.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX; glycerol-3-phosphate acyltransferase PlsY 1842621 yneS 5462058 yneS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 glycerol-3-phosphate acyltransferase PlsY YP_001421382.1 1842040 R 326423 CDS YP_001421383.1 154686222 5460262 1842773..1843180 1 NC_009725.1 conserved hypothetical protein YneT; hypothetical protein 1843180 yneT 5460262 yneT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421383.1 1842773 D 326423 CDS YP_001421384.1 154686223 5460263 1843604..1845571 1 NC_009725.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 1845571 parE 5460263 parE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DNA topoisomerase IV subunit B YP_001421384.1 1843604 D 326423 CDS YP_001421385.1 154686224 5460264 1845574..1847997 1 NC_009725.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 1847997 parC 5460264 parC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DNA topoisomerase IV subunit A YP_001421385.1 1845574 D 326423 CDS YP_001421386.1 154686225 5460265 complement(1848049..1848174) 1 NC_009725.1 hypothetical protein 1848174 5460265 RBAM_017920 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421386.1 1848049 R 326423 CDS YP_001421387.1 154686226 5460266 complement(1848199..1848552) 1 NC_009725.1 hypothetical protein YnfC; hypothetical protein 1848552 ynfC 5460266 ynfC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421387.1 1848199 R 326423 CDS YP_001421388.1 154686227 5460267 1848929..1850347 1 NC_009725.1 amino acid carrier protein AlsT; AlsT 1850347 alsT 5460267 alsT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 AlsT YP_001421388.1 1848929 D 326423 CDS YP_001421389.1 154686228 5463116 1850551..1851507 1 NC_009725.1 2-keto-3-deoxygluconokinase 1851507 5463116 RBAM_017950 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 2-keto-3-deoxygluconokinase YP_001421389.1 1850551 D 326423 CDS YP_001421390.1 154686229 5463117 1851537..1852556 1 NC_009725.1 conserved hypothetical protein YjmD; hypothetical protein 1852556 yjmD 5463117 yjmD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421390.1 1851537 D 326423 CDS YP_001421391.1 154686230 5463118 1852570..1853205 1 NC_009725.1 2-keto-3-deoxygluconate-6-phosphate aldolase KdgA; KdgA 1853205 kdgA 5463118 kdgA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 KdgA YP_001421391.1 1852570 D 326423 CDS YP_001421392.1 154686231 5463119 1853141..1854283 1 NC_009725.1 catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate; mannonate dehydratase 1854283 uxuA 5463119 uxuA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 mannonate dehydratase YP_001421392.1 1853141 D 326423 CDS YP_001421393.1 154686232 5463120 1854280..1855116 1 NC_009725.1 Converts D-mannonate to D-mannuronate; D-mannonate oxidoreductase 1855116 yjmF 5463120 yjmF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 D-mannonate oxidoreductase YP_001421393.1 1854280 D 326423 CDS YP_001421394.1 154686233 5463121 1855200..1856201 1 NC_009725.1 negative transcriptional regulator (LacI family) KdgR; KdgR 1856201 kdgR 5463121 kdgR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 KdgR YP_001421394.1 1855200 D 326423 CDS YP_001421395.1 154686234 5461829 1856276..1857544 1 NC_009725.1 hexuronate transporter ExuT; ExuT 1857544 exuT 5461829 exuT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ExuT YP_001421395.1 1856276 D 326423 CDS YP_001421396.1 154686235 5461830 1857666..1858481 1 NC_009725.1 hypothetical protein YndG; hypothetical protein 1858481 yndG 5461830 yndG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421396.1 1857666 D 326423 CDS YP_001421397.1 154686236 5461831 1858494..1858898 1 NC_009725.1 hypothetical protein YndH; hypothetical protein 1858898 yndH 5461831 yndH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421397.1 1858494 D 326423 CDS YP_001421398.1 154686237 5461832 1858802..1860520 1 NC_009725.1 hypothetical protein YndJ; hypothetical protein 1860520 yndJ 5461832 yndJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421398.1 1858802 D 326423 CDS YP_001421399.1 154686238 5461833 1860610..1860828 1 NC_009725.1 hypothetical protein 1860828 5461833 RBAM_018050 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421399.1 1860610 D 326423 CDS YP_001421400.1 154686239 5461834 1860871..1861032 1 NC_009725.1 hypothetical protein 1861032 5461834 RBAM_018060 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421400.1 1860871 D 326423 CDS YP_001421401.1 154686240 5461439 1861084..1861275 1 NC_009725.1 hypothetical protein 1861275 5461439 RBAM_018070 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421401.1 1861084 D 326423 CDS YP_001421402.1 154686241 5461440 1861427..1861738 1 NC_009725.1 hypothetical protein 1861738 5461440 RBAM_018080 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421402.1 1861427 D 326423 CDS YP_001421403.1 154686242 5461441 complement(1862007..1863215) 1 NC_009725.1 hypothetical protein 1863215 5461441 RBAM_018090 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421403.1 1862007 R 326423 CDS YP_001421404.1 154686243 5461442 complement(1863403..1864902) 1 NC_009725.1 endo-1,4-beta-glucanase; BglC 1864902 bglC 5461442 bglC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 BglC YP_001421404.1 1863403 R 326423 CDS YP_001421405.1 154686244 5461443 1865361..1865672 1 NC_009725.1 hypothetical protein 1865672 5461443 RBAM_018110 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421405.1 1865361 D 326423 CDS YP_001421406.1 154686245 5461444 complement(1865725..1867122) 1 NC_009725.1 two-component system sensor histidine kinase; cd00075, HATPase_c,Histidine kinase-like ATPases; hypothetical protein 1867122 yvrG 5461444 yvrG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421406.1 1865725 R 326423 CDS YP_001421407.1 154686246 5461144 complement(1867125..1867928) 1 NC_009725.1 two-component system response regulator; COG0745, OmpR like RR consisting of a CheY-leke receiver domain and a winged-helix-DNA-binding domain [signal transduction mechanism]; hypothetical protein 1867928 yvrH 5461144 yvrH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421407.1 1867125 R 326423 CDS YP_001421408.1 154686247 5461145 complement(1867976..1869247) 1 NC_009725.1 conserved hypothetical protein YnfF; hypothetical protein 1869247 ynfF 5461145 ynfF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421408.1 1867976 R 326423 CDS YP_001421409.1 154686248 5461146 complement(1869309..1870847) 1 NC_009725.1 endo-1,4-beta-xylanase D precursor; hypothetical protein 1870847 xynD 5461146 xynD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421409.1 1869309 R 326423 CDS YP_001421410.1 154686249 5461147 complement(1871172..1879031) 1 NC_009725.1 nonribosomal synthesis of bacillomycin D; bacillomycin D synthetase C; BmyC 1879031 bmyC 5461147 bmyC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 BmyC YP_001421410.1 1871172 R 326423 CDS YP_001421411.1 154686250 5461148 complement(1879116..1895207) 1 NC_009725.1 nonribosomal synthesis of bacillomycin D; bacillomycin D synthetase B; BmyB 1895207 bmyB 5461148 bmyB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 BmyB YP_001421411.1 1879116 R 326423 CDS YP_001421412.1 154686251 5461149 complement(1895252..1907200) 1 NC_009725.1 nonribosomal synthesis of bacillomycin D; bacillomycin D synthetase A; BmyA 1907200 bmyA 5461149 bmyA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 BmyA YP_001421412.1 1895252 R 326423 CDS YP_001421413.1 154686252 5462654 complement(1907220..1908422) 1 NC_009725.1 nonribosomal synthesis of bacillomycin D; malonyl-CoA transacylase; BmyD 1908422 bmyD 5462654 bmyD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 BmyD YP_001421413.1 1907220 R 326423 CDS YP_001421414.1 154686253 5462655 complement(1908982..1909767) 1 NC_009725.1 catalyzes the formation of acetoacetate from 3-hydroxybutyrate; 3-hydroxybutyrate dehydrogenase 1909767 yxjF 5462655 yxjF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 3-hydroxybutyrate dehydrogenase YP_001421414.1 1908982 R 326423 CDS YP_001421415.1 154686254 5462656 complement(1909780..1910442) 1 NC_009725.1 succinyl CoA:3-oxoacid CoA-transferase (subunit B) ScoB; ScoB 1910442 scoB 5462656 scoB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ScoB YP_001421415.1 1909780 R 326423 CDS YP_001421416.1 154686255 5462657 complement(1910460..1911161) 1 NC_009725.1 Succinyl CoA:3-oxoacid CoA-transferase (subunit A) ScoA; ScoA 1911161 scoA 5462657 scoA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ScoA YP_001421416.1 1910460 R 326423 CDS YP_001421417.1 154686256 5462658 complement(1911186..1912622) 1 NC_009725.1 conserved hypothetical protein YxjC; hypothetical protein 1912622 yxjC 5462658 yxjC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421417.1 1911186 R 326423 CDS YP_001421418.1 154686257 5462659 complement(1912927..1914123) 1 NC_009725.1 cytochrome P450 enzyme BioI; BioI 1914123 bioI 5462659 bioI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 BioI YP_001421418.1 1912927 R 326423 CDS YP_001421419.1 154686258 5459521 complement(1914125..1915144) 1 NC_009725.1 catalyzes the formation of biotin from dethiobiotin and sulfur 2 S-adenosyl-L-methionine; biotin synthase 1915144 bioB 5459521 bioB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 biotin synthase YP_001421419.1 1914125 R 326423 CDS YP_001421420.1 154686259 5459522 complement(1915147..1915848) 1 NC_009725.1 DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; dithiobiotin synthetase 1915848 bioD 5459522 bioD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 dithiobiotin synthetase YP_001421420.1 1915147 R 326423 CDS YP_001421421.1 154686260 5459523 complement(1915845..1917005) 1 NC_009725.1 8-amino-7-oxononanoate synthase BioF; hypothetical protein 1917005 bioF 5459523 bioF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421421.1 1915845 R 326423 CDS YP_001421422.1 154686261 5459524 complement(1916995..1918341) 1 NC_009725.1 catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 1918341 bioA 5459524 bioA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_001421422.1 1916995 R 326423 CDS YP_001421423.1 154686262 5459525 complement(1918338..1919108) 1 NC_009725.1 catalyzes the formation of pimeloyl-CoA from pimelate and coenzyme A; 6-carboxyhexanoate--CoA ligase 1919108 bioW 5459525 bioW Bacillus amyloliquefaciens subsp. plantarum str. FZB42 6-carboxyhexanoate--CoA ligase YP_001421423.1 1918338 R 326423 CDS YP_001421424.1 154686263 5459526 1919385..1919792 1 NC_009725.1 conserved hypothetical protein YngA; hypothetical protein 1919792 yngA 5459526 yngA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421424.1 1919385 D 326423 CDS YP_001421425.1 154686264 5461835 1919799..1920692 1 NC_009725.1 UTP-glucose-1-phosphate uridylytransferase YngB; hypothetical protein 1920692 yngB 5461835 yngB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421425.1 1919799 D 326423 CDS YP_001421426.1 154686265 5461836 1920767..1921357 1 NC_009725.1 conserved hypothetical protein YngC; hypothetical protein 1921357 yngC 5461836 yngC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421426.1 1920767 D 326423 CDS YP_001421427.1 154686266 5461837 complement(1921412..1922941) 1 NC_009725.1 propionyl-CoA carboxylase YngE; hypothetical protein 1922941 yngE 5461837 yngE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421427.1 1921412 R 326423 CDS YP_001421428.1 154686267 5461838 complement(1922959..1923738) 1 NC_009725.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 1923738 yngF 5461838 yngF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 enoyl-CoA hydratase YP_001421428.1 1922959 R 326423 CDS YP_001421429.1 154686268 5461839 complement(1923752..1924651) 1 NC_009725.1 catalyzes the formation of acetoacetate and acetyl-CoA from 3-hydroxy-3-methylglutaryl-CoA; hydroxymethylglutaryl-CoA lyase 1924651 yngG 5461839 yngG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hydroxymethylglutaryl-CoA lyase YP_001421429.1 1923752 R 326423 CDS YP_001421430.1 154686269 5461840 complement(1924667..1924879) 1 NC_009725.1 composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit 1924879 5461840 RBAM_018360 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit YP_001421430.1 1924667 R 326423 CDS YP_001421431.1 154686270 5460033 complement(1924876..1926225) 1 NC_009725.1 an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit 1926225 yngH 5460033 yngH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 acetyl-CoA carboxylase biotin carboxylase subunit YP_001421431.1 1924876 R 326423 CDS YP_001421432.1 154686271 5460034 complement(1926247..1927887) 1 NC_009725.1 activates fatty acids by binding to coenzyme A; AMP-binding protein 1927887 yngI 5460034 yngI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 AMP-binding protein YP_001421432.1 1926247 R 326423 CDS YP_001421433.1 154686272 5460035 complement(1927933..1929075) 1 NC_009725.1 Acyl-CoA dehydrogenase YngJ; hypothetical protein 1929075 yngJ 5460035 yngJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421433.1 1927933 R 326423 CDS YP_001421434.1 154686273 5460036 complement(1929215..1930753) 1 NC_009725.1 conserved hypothetical protein YngK; hypothetical protein 1930753 yngK 5460036 yngK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421434.1 1929215 R 326423 CDS YP_001421435.1 154686274 5460037 complement(1930875..1931306) 1 NC_009725.1 conserved hypothetical protein YngL; hypothetical protein 1931306 yngL 5460037 yngL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421435.1 1930875 R 326423 CDS YP_001421436.1 154686275 5460038 complement(1931328..1935131) 1 NC_009725.1 nonribosomal fengycin synthesis; COG1020; fengycin synthetase E; FenE 1935131 fenE 5460038 fenE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 FenE YP_001421436.1 1931328 R 326423 CDS YP_001421437.1 154686276 5459676 complement(1935150..1945925) 1 NC_009725.1 nonribosomal fengycin synthesis; COG1020; fengycin synthetase D; FenD 1945925 fenD 5459676 fenD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 FenD YP_001421437.1 1935150 R 326423 CDS YP_001421438.1 154686277 5459677 complement(1945951..1953600) 1 NC_009725.1 nonribosomal fengycin synthesis; COG1020; fengycin synthetase C; FenC 1953600 fenC 5459677 fenC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 FenC YP_001421438.1 1945951 R 326423 CDS YP_001421439.1 154686278 5459678 complement(1953616..1961313) 1 NC_009725.1 nonribosomal fengycin synthesis; COG1020; fengycin synthetase B; FenB 1961313 fenB 5459678 fenB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 FenB YP_001421439.1 1953616 R 326423 CDS YP_001421440.1 154686279 5459679 complement(1961339..1968997) 1 NC_009725.1 nonribosomal fengycin synthesis; COG1020; fengycin synthetase A; FenA 1968997 fenA 5459679 fenA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 FenA YP_001421440.1 1961339 R 326423 CDS YP_001421441.1 154686280 5459680 complement(1969478..1970953) 1 NC_009725.1 penicillin-binding protein DacC; hypothetical protein 1970953 dacC 5459680 dacC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421441.1 1969478 R 326423 CDS YP_001421442.1 154686281 5459681 complement(1970972..1971940) 1 NC_009725.1 conserved hypothetical protein YoxA; hypothetical protein 1971940 yoxA 5459681 yoxA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421442.1 1970972 R 326423 CDS YP_001421443.1 154686282 5459900 complement(1972055..1973443) 1 NC_009725.1 conserved hypothetical protein YoeA; hypothetical protein 1973443 yoeA 5459900 yoeA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421443.1 1972055 R 326423 CDS YP_001421444.1 154686283 5459901 1973672..1974214 1 NC_009725.1 hypothetical protein YoeB; hypothetical protein 1974214 yoeB 5459901 yoeB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421444.1 1973672 D 326423 CDS YP_001421445.1 154686284 5459903 complement(1974475..1975020) 1 NC_009725.1 phage integrase family site specific recombinase 1975020 5459903 RBAM_018520 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 phage integrase family site specific recombinase YP_001421445.1 1974475 R 326423 CDS YP_001421446.1 154686285 5459904 complement(1975336..1975566) 1 NC_009725.1 hypothetical protein YoeD; hypothetical protein 1975566 yoeD 5459904 yoeD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421446.1 1975336 R 326423 CDS YP_001421447.1 154686286 5460934 1975810..1977585 1 NC_009725.1 gamma-glutamyltranspeptidase; upregulated by plant exudate; Ggt 1977585 ggt 5460934 ggt Bacillus amyloliquefaciens subsp. plantarum str. FZB42 Ggt YP_001421447.1 1975810 D 326423 CDS YP_001421448.1 154686287 5460935 complement(1977632..1978807) 1 NC_009725.1 conserved hypothetical protein YbcL; hypothetical protein 1978807 ybcL 5460935 ybcL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421448.1 1977632 R 326423 CDS YP_001421449.1 154686288 5460936 complement(1978952..1979254) 1 NC_009725.1 hypothetical protein 1979254 5460936 RBAM_018560 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421449.1 1978952 R 326423 CDS YP_001421450.1 154686289 5460937 complement(1979286..1979459) 1 NC_009725.1 hypothetical protein 1979459 5460937 RBAM_018570 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421450.1 1979286 R 326423 CDS YP_001421451.1 154686290 5460938 complement(1979581..1980447) 1 NC_009725.1 transcriptional regulator YofA; hypothetical protein 1980447 yofA 5460938 yofA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421451.1 1979581 R 326423 CDS YP_001421452.1 154686291 5460939 1980563..1981546 1 NC_009725.1 alcohol dehydrogenase YogA; hypothetical protein 1981546 yogA 5460939 yogA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421452.1 1980563 D 326423 CDS YP_001421453.1 154686292 5462803 complement(1981573..1981773) 1 NC_009725.1 hypothetical protein 1981773 5462803 RBAM_018600 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421453.1 1981573 R 326423 CDS YP_001421454.1 154686293 5462804 complement(1981869..1983350) 1 NC_009725.1 glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta 1983350 gltD 5462804 gltD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 glutamate synthase subunit beta YP_001421454.1 1981869 R 326423 CDS YP_001421455.1 154686294 5462805 complement(1983367..1987926) 1 NC_009725.1 glutamate synthase [NADPH] large subunit GltA; GltA 1987926 gltA 5462805 gltA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GltA YP_001421455.1 1983367 R 326423 CDS YP_001421456.1 154686295 5462806 1988072..1988974 1 NC_009725.1 HTH-type transcriptional regulator GltC; GltC 1988974 gltC 5462806 gltC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GltC YP_001421456.1 1988072 D 326423 CDS YP_001421457.1 154686296 5462807 complement(1989035..1990153) 1 NC_009725.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 1990153 proJ 5462807 proJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 gamma-glutamyl kinase YP_001421457.1 1989035 R 326423 CDS YP_001421458.1 154686297 5462808 complement(1990178..1991059) 1 NC_009725.1 pyrroline-5-carboxylate reductase ProH; ProH 1991059 proH 5462808 proH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ProH YP_001421458.1 1990178 R 326423 CDS YP_001421459.1 154686298 5461763 complement(1991212..1991589) 1 NC_009725.1 replication terminator protein Rtp; Rtp 1991589 rtp 5461763 rtp Bacillus amyloliquefaciens subsp. plantarum str. FZB42 Rtp YP_001421459.1 1991212 R 326423 CDS YP_001421460.1 154686299 5461764 1992012..1992440 1 NC_009725.1 GNAT family acetyltransferase 1992440 5461764 RBAM_018670 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GNAT family acetyltransferase YP_001421460.1 1992012 D 326423 CDS YP_001421461.1 154686300 5461765 1992581..1992874 1 NC_009725.1 transposase RBAM 1992874 5461765 RBAM_018680 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 transposase RBAM YP_001421461.1 1992581 D 326423 CDS YP_001421462.1 154686301 5461766 1993335..1994105 1 NC_009725.1 dehydrogenase 1994105 5461766 RBAM_018690 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 dehydrogenase YP_001421462.1 1993335 D 326423 CDS YP_001421463.1 154686302 5461767 complement(1994245..1995450) 1 NC_009725.1 hypothetical protein 1995450 5461767 RBAM_018700 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421463.1 1994245 R 326423 CDS YP_001421464.1 154686303 5461768 complement(1995803..1996528) 1 NC_009725.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 1996528 fabG 5461768 fabG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 3-ketoacyl-ACP reductase YP_001421464.1 1995803 R 326423 CDS YP_001421465.1 154686304 5462237 1996649..1996954 1 NC_009725.1 conserved hypothetical protein YoxC; hypothetical protein 1996954 yoxC 5462237 yoxC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421465.1 1996649 D 326423 CDS YP_001421466.1 154686305 5462238 1997020..1997781 1 NC_009725.1 hypothetical protein YoxB; hypothetical protein 1997781 yoxB 5462238 yoxB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421466.1 1997020 D 326423 CDS YP_001421467.1 154686306 5462239 complement(1997896..1999062) 1 NC_009725.1 conserved hypothetical protein YoaB; hypothetical protein 1999062 yoaB 5462239 yoaB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421467.1 1997896 R 326423 CDS YP_001421468.1 154686307 5462240 complement(1999110..2000576) 1 NC_009725.1 xylulokinase YoaC; hypothetical protein 2000576 yoaC 5462240 yoaC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421468.1 1999110 R 326423 CDS YP_001421469.1 154686308 5462241 complement(2000569..2001585) 1 NC_009725.1 phosphoglycerate dehydrogenase YoaD; hypothetical protein 2001585 yoaD 5462241 yoaD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421469.1 2000569 R 326423 CDS YP_001421470.1 154686309 5462242 2001947..2003995 1 NC_009725.1 formate dehydrogenase YoaE; hypothetical protein 2003995 yoaE 5462242 yoaE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421470.1 2001947 D 326423 CDS YP_001421471.1 154686310 5462411 2004130..2004357 1 NC_009725.1 hypothetical protein YoaF; hypothetical protein 2004357 yoaF 5462411 yoaF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421471.1 2004130 D 326423 CDS YP_001421472.1 154686311 5462412 complement(2004401..2004625) 1 NC_009725.1 hypothetical protein 2004625 5462412 RBAM_018790 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421472.1 2004401 R 326423 CDS YP_001421473.1 154686312 5462413 2004810..2005400 1 NC_009725.1 transcriptional regulator 2005400 5462413 RBAM_018800 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 transcriptional regulator YP_001421473.1 2004810 D 326423 CDS YP_001421474.1 154686313 5462414 2005393..2005674 1 NC_009725.1 hypothetical protein 2005674 5462414 RBAM_018810 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421474.1 2005393 D 326423 CDS YP_001421475.1 154686314 5462415 complement(2005714..2006178) 1 NC_009725.1 hypothetical protein YobK; hypothetical protein 2006178 yobK 5462415 yobK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421475.1 2005714 R 326423 CDS YP_001421476.1 154686315 5462416 complement(2006192..2007991) 1 NC_009725.1 hypothetical protein YobL; hypothetical protein 2007991 yobL 5462416 yobL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421476.1 2006192 R 326423 CDS YP_001421477.1 154686316 5462118 complement(2008322..2008654) 1 NC_009725.1 molecular chaperone CsaA; hypothetical protein 2008654 csaA 5462118 csaA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421477.1 2008322 R 326423 CDS YP_001421478.1 154686317 5462119 complement(2008723..2009433) 1 NC_009725.1 transcriptional regulator YobQ; hypothetical protein 2009433 yobQ 5462119 yobQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421478.1 2008723 R 326423 CDS YP_001421479.1 154686318 5462120 complement(2009485..2010051) 1 NC_009725.1 hypothetical protein YobS; hypothetical protein 2010051 yobS 5462120 yobS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421479.1 2009485 R 326423 CDS YP_001421480.1 154686319 5462121 complement(2010051..2010770) 1 NC_009725.1 conserved hypothetical protein YobT; hypothetical protein 2010770 yobT 5462121 yobT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421480.1 2010051 R 326423 CDS YP_001421481.1 154686320 5462122 2010995..2011516 1 NC_009725.1 hypothetical protein YobW; hypothetical protein 2011516 yobW 5462122 yobW Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421481.1 2010995 D 326423 CDS YP_001421482.1 154686321 5462123 complement(2011546..2011878) 1 NC_009725.1 transcriptional regulator YozA; hypothetical protein 2011878 yozA 5462123 yozA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421482.1 2011546 R 326423 CDS YP_001421483.1 154686322 5461093 2012070..2012735 1 NC_009725.1 conserved hypothetical protein YocA; hypothetical protein 2012735 yocA 5461093 yocA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421483.1 2012070 D 326423 CDS YP_001421484.1 154686323 5461094 complement(2012800..2013336) 1 NC_009725.1 conserved hypothetical protein YozB; hypothetical protein 2013336 yozB 5461094 yozB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421484.1 2012800 R 326423 CDS YP_001421485.1 154686324 5461095 complement(2013481..2014266) 1 NC_009725.1 hypothetical protein YocB; hypothetical protein 2014266 yocB 5461095 yocB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421485.1 2013481 R 326423 CDS YP_001421486.1 154686325 5461096 2014461..2014958 1 NC_009725.1 hypothetical protein YocC; hypothetical protein 2014958 yocC 5461096 yocC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421486.1 2014461 D 326423 CDS YP_001421487.1 154686326 5461097 2015022..2015999 1 NC_009725.1 conserved hypothetical protein YocD; hypothetical protein 2015999 yocD 5461097 yocD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421487.1 2015022 D 326423 CDS YP_001421488.1 154686327 5461098 complement(2016031..2016423) 1 NC_009725.1 hypothetical protein 2016423 5461098 RBAM_018950 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421488.1 2016031 R 326423 CDS YP_001421489.1 154686328 5459829 complement(2016586..2017455) 1 NC_009725.1 cell-wall binding protein YocH; hypothetical protein 2017455 yocH 5459829 yocH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421489.1 2016586 R 326423 CDS YP_001421490.1 154686329 5459830 complement(2017691..2019469) 1 NC_009725.1 ATP-dependent DNA helicase YocI; hypothetical protein 2019469 yocI 5459830 yocI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421490.1 2017691 R 326423 CDS YP_001421491.1 154686330 5459831 complement(2019483..2019986) 1 NC_009725.1 hypothetical protein YocL; hypothetical protein 2019986 yocL 5459831 yocL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421491.1 2019483 R 326423 CDS YP_001421492.1 154686331 5459832 2020079..2020312 1 NC_009725.1 hypothetical protein 2020312 5459832 RBAM_018990 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421492.1 2020079 D 326423 CDS YP_001421493.1 154686332 5459833 complement(2020299..2020781) 1 NC_009725.1 hypothetical protein YocM; hypothetical protein 2020781 yocM 5459833 yocM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421493.1 2020299 R 326423 CDS YP_001421494.1 154686333 5459834 2020852..2021124 1 NC_009725.1 hypothetical protein YozN; hypothetical protein 2021124 yozN 5459834 yozN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421494.1 2020852 D 326423 CDS YP_001421495.1 154686334 5461969 2021121..2021354 1 NC_009725.1 hypothetical protein YocN; hypothetical protein 2021354 yocN 5461969 yocN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421495.1 2021121 D 326423 CDS YP_001421496.1 154686335 5461970 complement(2021399..2021743) 1 NC_009725.1 hypothetical protein YozO; hypothetical protein 2021743 yozO 5461970 yozO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421496.1 2021399 R 326423 CDS YP_001421497.1 154686336 5461971 complement(2022037..2022177) 1 NC_009725.1 hypothetical protein 2022177 5461971 RBAM_019040 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421497.1 2022037 R 326423 CDS YP_001421498.1 154686337 5461972 complement(2022243..2022446) 1 NC_009725.1 hypothetical protein YozC; hypothetical protein 2022446 yozC 5461972 yozC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421498.1 2022243 R 326423 CDS YP_001421499.1 154686338 5461973 2022630..2024117 1 NC_009725.1 indol 3-acet-aldehyde dehydrogenase; involved in Trp dependent IAA synthesis. Mutant dhaS was found impaired in IAA synthesis and plant growth promotion; DhaS 2024117 dhaS 5461973 dhaS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DhaS YP_001421499.1 2022630 D 326423 CDS YP_001421500.1 154686339 5461974 2024214..2026097 1 NC_009725.1 squalene-hopene cyclase SqhC; SqhC 2026097 sqhC 5461974 sqhC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SqhC YP_001421500.1 2024214 D 326423 CDS YP_001421501.1 154686340 5461913 2026094..2026939 1 NC_009725.1 superoxide dismutase SodF; SodF 2026939 sodF 5461913 sodF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SodF YP_001421501.1 2026094 D 326423 CDS YP_001421502.1 154686341 5461914 complement(2026979..2028316) 1 NC_009725.1 sodium-dependent transporter YocR; hypothetical protein 2028316 yocR 5461914 yocR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421502.1 2026979 R 326423 CDS YP_001421503.1 154686342 5461915 2028520..2029494 1 NC_009725.1 sodium-dependent transporter YocS; hypothetical protein 2029494 yocS 5461915 yocS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421503.1 2028520 D 326423 CDS YP_001421504.1 154686343 5461916 complement(2029527..2030273) 1 NC_009725.1 hypothetical protein 2030273 5461916 RBAM_019110 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421504.1 2029527 R 326423 CDS YP_001421505.1 154686344 5461917 complement(2030347..2031594) 1 NC_009725.1 component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA; dihydrolipoamide succinyltransferase 2031594 odhB 5461917 odhB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 dihydrolipoamide succinyltransferase YP_001421505.1 2030347 R 326423 CDS YP_001421506.1 154686345 5461918 complement(2031610..2034444) 1 NC_009725.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 2034444 sucA 5461918 sucA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 2-oxoglutarate dehydrogenase E1 YP_001421506.1 2031610 R 326423 CDS YP_001421507.1 154686346 5460856 complement(2034672..2036588) 1 NC_009725.1 conserved hypothetical protein YojO; hypothetical protein 2036588 yojO 5460856 yojO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421507.1 2034672 R 326423 CDS YP_001421508.1 154686347 5460857 complement(2036599..2037489) 1 NC_009725.1 nitric-oxide reductase YojN; hypothetical protein 2037489 yojN 5460857 yojN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421508.1 2036599 R 326423 CDS YP_001421509.1 154686348 5460858 complement(2037567..2038157) 1 NC_009725.1 superoxide dismutase YojM; hypothetical protein 2038157 yojM 5460858 yojM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421509.1 2037567 R 326423 CDS YP_001421510.1 154686349 5460859 complement(2038238..2039479) 1 NC_009725.1 conserved hypothetical protein YojL; hypothetical protein 2039479 yojL 5460859 yojL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421510.1 2038238 R 326423 CDS YP_001421511.1 154686350 5460860 complement(2039800..2041011) 1 NC_009725.1 macrolide glucosyltransferase YojK; hypothetical protein 2041011 yojK 5460860 yojK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421511.1 2039800 R 326423 CDS YP_001421512.1 154686351 5460861 complement(2041130..2041756) 1 NC_009725.1 conserved hypothetical protein YojJ; hypothetical protein 2041756 yojJ 5460861 yojJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421512.1 2041130 R 326423 CDS YP_001421513.1 154686352 5462939 2042034..2043392 1 NC_009725.1 NorM; MdtK; functions as a Na(+)/drug antiporter; inactivation in Vibrio cholerae results in susceptibility to fluoroquinolones; multidrug efflux protein 2043392 yojI 5462939 yojI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 multidrug efflux protein YP_001421513.1 2042034 D 326423 CDS YP_001421514.1 154686353 5462940 2043406..2044254 1 NC_009725.1 conserved hypothetical protein YojH; hypothetical protein 2044254 yojH 5462940 yojH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421514.1 2043406 D 326423 CDS YP_001421515.1 154686354 5462941 complement(2044282..2044947) 1 NC_009725.1 conserved hypothetical protein YojG; hypothetical protein 2044947 yojG 5462941 yojG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421515.1 2044282 R 326423 CDS YP_001421516.1 154686355 5462942 complement(2044965..2045315) 1 NC_009725.1 conserved hypothetical protein YojF; hypothetical protein 2045315 yojF 5462942 yojF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421516.1 2044965 R 326423 CDS YP_001421517.1 154686356 5462943 complement(2045312..2045590) 1 NC_009725.1 hypothetical protein 2045590 5462943 RBAM_019240 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421517.1 2045312 R 326423 CDS YP_001421518.1 154686357 5462944 complement(2045658..2046554) 1 NC_009725.1 hypothetical protein YojE; hypothetical protein 2046554 yojE 5462944 yojE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421518.1 2045658 R 326423 CDS YP_001421519.1 154686358 5460724 2046652..2047116 1 NC_009725.1 hypothetical protein YozR; hypothetical protein 2047116 yozR 5460724 yozR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421519.1 2046652 D 326423 CDS YP_001421520.1 154686359 5460725 complement(2047152..2047391) 1 NC_009725.1 hypothetical protein 2047391 5460725 RBAM_019270 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421520.1 2047152 R 326423 CDS YP_001421521.1 154686360 5460726 2047594..2047983 1 NC_009725.1 conserved hypothetical protein YodA; hypothetical protein 2047983 yodA 5460726 yodA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421521.1 2047594 D 326423 CDS YP_001421522.1 154686361 5460727 2048036..2048404 1 NC_009725.1 hypothetical protein YoaQ; hypothetical protein 2048404 yoaQ 5460727 yoaQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421522.1 2048036 D 326423 CDS YP_001421523.1 154686362 5460728 complement(2048444..2048785) 1 NC_009725.1 conserved hypothetical protein YodB; hypothetical protein 2048785 yodB 5460728 yodB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421523.1 2048444 R 326423 CDS YP_001421524.1 154686363 5460729 2048912..2049523 1 NC_009725.1 nitroreductase YodC; hypothetical protein 2049523 yodC 5460729 yodC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421524.1 2048912 D 326423 CDS YP_001421525.1 154686364 5459835 complement(2049567..2050172) 1 NC_009725.1 conserved hypothetical protein YodD; hypothetical protein 2050172 yodD 5459835 yodD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421525.1 2049567 R 326423 CDS YP_001421526.1 154686365 5459836 complement(2050172..2051095) 1 NC_009725.1 conserved hypothetical protein YodE; hypothetical protein 2051095 yodE 5459836 yodE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421526.1 2050172 R 326423 CDS YP_001421527.1 154686366 5459837 2051481..2052971 1 NC_009725.1 proline permease homolog YodF; hypothetical protein 2052971 yodF 5459837 yodF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421527.1 2051481 D 326423 CDS YP_001421528.1 154686367 5459838 complement(2053015..2054484) 1 NC_009725.1 hypothetical protein 2054484 5459838 RBAM_019350 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421528.1 2053015 R 326423 CDS YP_001421529.1 154686368 5459839 complement(2054632..2056074) 1 NC_009725.1 6-phospho-beta-glucosidase BglA; BglA 2056074 bglA 5459839 bglA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 BglA YP_001421529.1 2054632 R 326423 CDS YP_001421530.1 154686369 5459840 2056324..2057049 1 NC_009725.1 transcriptional regulator YydK; hypothetical protein 2057049 yydK 5459840 yydK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421530.1 2056324 D 326423 CDS YP_001421531.1 154686370 5461850 complement(2057110..2058513) 1 NC_009725.1 carboxy-terminal processing protease CtpA; hypothetical protein 2058513 ctpA 5461850 ctpA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421531.1 2057110 R 326423 CDS YP_001421532.1 154686371 5461851 2058660..2059361 1 NC_009725.1 conserved hypothetical protein YodH; hypothetical protein 2059361 yodH 5461851 yodH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421532.1 2058660 D 326423 CDS YP_001421533.1 154686372 5461852 2059454..2059705 1 NC_009725.1 hypothetical protein YodI; hypothetical protein 2059705 yodI 5461852 yodI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421533.1 2059454 D 326423 CDS YP_001421534.1 154686373 5461853 complement(2059749..2060567) 1 NC_009725.1 D-alanyl-D-alanine carboxypeptidase YodJ; hypothetical protein 2060567 yodJ 5461853 yodJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421534.1 2059749 R 326423 CDS YP_001421535.1 154686374 5461854 complement(2060651..2061349) 1 NC_009725.1 catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate; purine nucleoside phosphorylase 2061349 deoD 5461854 deoD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 purine nucleoside phosphorylase YP_001421535.1 2060651 R 326423 CDS YP_001421536.1 154686375 5461855 2061486..2061611 1 NC_009725.1 hypothetical protein 2061611 5461855 RBAM_019430 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421536.1 2061486 D 326423 CDS YP_001421537.1 154686376 5461869 complement(2061666..2061986) 1 NC_009725.1 hypothetical protein YodL; hypothetical protein 2061986 yodL 5461869 yodL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421537.1 2061666 R 326423 CDS YP_001421538.1 154686377 5461870 complement(2062046..2062657) 1 NC_009725.1 conserved hypothetical protein YodM; hypothetical protein 2062657 yodM 5461870 yodM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421538.1 2062046 R 326423 CDS YP_001421539.1 154686378 5461871 complement(2062731..2062904) 1 NC_009725.1 hypothetical protein YozD; hypothetical protein 2062904 yozD 5461871 yozD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421539.1 2062731 R 326423 CDS YP_001421540.1 154686379 5461872 2063022..2063165 1 NC_009725.1 hypothetical protein 2063165 5461872 RBAM_019470 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421540.1 2063022 D 326423 CDS YP_001421541.1 154686380 5461873 complement(2063162..2063842) 1 NC_009725.1 hypothetical protein YodN; hypothetical protein 2063842 yodN 5461873 yodN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421541.1 2063162 R 326423 CDS YP_001421542.1 154686381 5461874 complement(2064092..2064298) 1 NC_009725.1 hypothetical protein 2064298 5461874 RBAM_019490 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421542.1 2064092 R 326423 CDS YP_001421543.1 154686382 5461737 complement(2064611..2064835) 1 NC_009725.1 hypothetical protein YozE; hypothetical protein 2064835 yozE 5461737 yozE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421543.1 2064611 R 326423 CDS YP_001421544.1 154686383 5461738 complement(2064910..2065188) 1 NC_009725.1 hypothetical protein YokU; hypothetical protein 2065188 yokU 5461738 yokU Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421544.1 2064910 R 326423 CDS YP_001421545.1 154686384 5461739 complement(2065185..2066606) 1 NC_009725.1 L-lysine 2,3-aminomutase KamA; hypothetical protein 2066606 kamA 5461739 kamA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421545.1 2065185 R 326423 CDS YP_001421546.1 154686385 5461740 complement(2066603..2067469) 1 NC_009725.1 conserved hypothetical protein YodP; hypothetical protein 2067469 yodP 5461740 yodP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421546.1 2066603 R 326423 CDS YP_001421547.1 154686386 5461741 complement(2067438..2068739) 1 NC_009725.1 catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine; acetylornithine deacetylase 2068739 yodQ 5461741 yodQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 acetylornithine deacetylase YP_001421547.1 2067438 R 326423 CDS YP_001421548.1 154686387 5461742 complement(2068711..2069406) 1 NC_009725.1 coenzyme A transferase , beta subunit YodR; hypothetical protein 2069406 yodR 5461742 yodR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421548.1 2068711 R 326423 CDS YP_001421549.1 154686388 5460121 complement(2069391..2070080) 1 NC_009725.1 coenzyme A transferase , alpha subunit YodS; hypothetical protein 2070080 yodS 5460121 yodS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421549.1 2069391 R 326423 CDS YP_001421550.1 154686389 5460122 complement(2070087..2071418) 1 NC_009725.1 aminotransferase class-III protein YodT; hypothetical protein 2071418 yodT 5460122 yodT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421550.1 2070087 R 326423 CDS YP_001421551.1 154686390 5460123 complement(2071665..2071880) 1 NC_009725.1 conserved hypothetical protein YosT; hypothetical protein 2071880 yosT 5460123 yosT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421551.1 2071665 R 326423 CDS YP_001421552.1 154686391 5460124 complement(2072475..2073296) 1 NC_009725.1 spore maturation protein CgeE; CgeE 2073296 cgeE 5460124 cgeE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 CgeE YP_001421552.1 2072475 R 326423 CDS YP_001421553.1 154686392 5460125 complement(2073293..2074564) 1 NC_009725.1 spore maturation protein CgeD; CgeD 2074564 cgeD 5460125 cgeD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 CgeD YP_001421553.1 2073293 R 326423 CDS YP_001421554.1 154686393 5460126 complement(2074629..2074928) 1 NC_009725.1 spore maturation protein CgeC; CgeC 2074928 cgeC 5460126 cgeC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 CgeC YP_001421554.1 2074629 R 326423 CDS YP_001421555.1 154686394 5461709 2075139..2075570 1 NC_009725.1 spore maturation protein CgeA; CgeA 2075570 cgeA 5461709 cgeA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 CgeA YP_001421555.1 2075139 D 326423 CDS YP_001421556.1 154686395 5461710 2075577..2076533 1 NC_009725.1 spore maturation protein CgeB; CgeB 2076533 cgeB 5461710 cgeB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 CgeB YP_001421556.1 2075577 D 326423 CDS YP_001421557.1 154686396 5461711 complement(2076583..2077734) 1 NC_009725.1 3-phytase precursor (Myo-inositol-hexaphosphate 3-phosphohydrolase); Phy 2077734 phy 5461711 phy Bacillus amyloliquefaciens subsp. plantarum str. FZB42 Phy YP_001421557.1 2076583 R 326423 CDS YP_001421558.1 154686397 5461712 2078050..2078475 1 NC_009725.1 capsular polysaccharide biosynthesis protein homolog YodU; hypothetical protein 2078475 yodU 5461712 yodU Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421558.1 2078050 D 326423 CDS YP_001421559.1 154686398 5461713 complement(2078509..2078685) 1 NC_009725.1 conserved hypothetical protein [bacteriophage SPBc2] YotN; hypothetical protein 2078685 yotN 5461713 yotN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421559.1 2078509 R 326423 CDS YP_001421560.1 154686399 5461714 complement(2079047..2079400) 1 NC_009725.1 hypothetical protein YobA; hypothetical protein 2079400 yobA 5461714 yobA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421560.1 2079047 R 326423 CDS YP_001421561.1 154686400 5459613 complement(2079403..2079588) 1 NC_009725.1 hypothetical protein 2079588 5459613 RBAM_019680 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421561.1 2079403 R 326423 CDS YP_001421562.1 154686401 5459614 complement(2079672..2079782) 1 NC_009725.1 hypothetical protein [bacteriophage SPBc2] YorC; hypothetical protein 2079782 yorC 5459614 yorC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421562.1 2079672 R 326423 CDS YP_001421563.1 154686402 5459615 2080208..2080582 1 NC_009725.1 hypothetical protein [bacteriophage SPBc2] YoqO; hypothetical protein 2080582 yoqO 5459615 yoqO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421563.1 2080208 D 326423 CDS YP_001421564.1 154686403 5459616 complement(2080615..2080701) 1 NC_009725.1 hypothetical protein [bacteriophage SPBc2] YoqN; hypothetical protein 2080701 yoqN 5459616 yoqN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421564.1 2080615 R 326423 CDS YP_001421565.1 154686404 5459617 complement(2080816..2081268) 1 NC_009725.1 hypothetical protein [bacteriophage SPBc2] YoqH; hypothetical protein 2081268 yoqH 5459617 yoqH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421565.1 2080816 R 326423 CDS YP_001421566.1 154686405 5459618 2081538..2082674 1 NC_009725.1 response regulator aspartate phosphatase; prevents sporulation by dephosphorylating RR; RapA1 2082674 rapA1 5459618 rapA1 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 RapA1 YP_001421566.1 2081538 D 326423 CDS YP_001421567.1 154686406 5462988 complement(2082877..2083506) 1 NC_009725.1 UV-damage repair protein UvrX; UvrX 2083506 uvrX 5462988 uvrX Bacillus amyloliquefaciens subsp. plantarum str. FZB42 UvrX YP_001421567.1 2082877 R 326423 CDS YP_001421568.1 154686407 5462989 complement(2083569..2084981) 1 NC_009725.1 hypothetical protein 2084981 5462989 RBAM_019750 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421568.1 2083569 R 326423 CDS YP_001421569.1 154686408 5462990 complement(2085140..2086339) 1 NC_009725.1 oxidoreductase 2086339 5462990 RBAM_019760 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 oxidoreductase YP_001421569.1 2085140 R 326423 CDS YP_001421570.1 154686409 5462991 complement(2086586..2087164) 1 NC_009725.1 two-component response regulator 2087164 5462991 RBAM_019770 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 two-component response regulator YP_001421570.1 2086586 R 326423 CDS YP_001421571.1 154686410 5462992 complement(2087157..2088230) 1 NC_009725.1 two-component sensor histidine kinase 2088230 5462992 RBAM_019780 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 two-component sensor histidine kinase YP_001421571.1 2087157 R 326423 CDS YP_001421572.1 154686411 5462993 complement(2088677..2089204) 1 NC_009725.1 conserved membrane protein YrkJ1; hypothetical protein 2089204 yrkJ1 5462993 yrkJ1 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421572.1 2088677 R 326423 CDS YP_001421573.1 154686412 5462768 complement(2089972..2090112) 1 NC_009725.1 hypothetical protein [bacteriophage SPBc2] YolB; hypothetical protein 2090112 yolB 5462768 yolB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421573.1 2089972 R 326423 CDS YP_001421574.1 154686413 5462769 complement(2090978..2091538) 1 NC_009725.1 hypothetical protein [bacteriophage SPBc2] YokK; hypothetical protein 2091538 yokK 5462769 yokK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421574.1 2090978 R 326423 CDS YP_001421575.1 154686414 5462770 complement(2091539..2092228) 1 NC_009725.1 hypothetical protein [bacteriophage SPBc2] YokI1; hypothetical protein 2092228 yokI1 5462770 yokI1 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421575.1 2091539 R 326423 CDS YP_001421576.1 154686415 5462771 2092844..2094511 1 NC_009725.1 site-specific recombinase [bacteriophage SPBc2] YokA; hypothetical protein 2094511 yokA 5462771 yokA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421576.1 2092844 D 326423 CDS YP_001421577.1 154686416 5462772 2094534..2095124 1 NC_009725.1 conserved hypothetical protein YpqP; hypothetical protein 2095124 ypqP 5462772 ypqP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421577.1 2094534 D 326423 CDS YP_001421578.1 154686417 5462773 complement(2095165..2095599) 1 NC_009725.1 this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress; methionine sulfoxide reductase B 2095599 msrB 5462773 msrB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 methionine sulfoxide reductase B YP_001421578.1 2095165 R 326423 CDS YP_001421579.1 154686418 5460039 complement(2095601..2096134) 1 NC_009725.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A 2096134 msrA 5460039 msrA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 methionine sulfoxide reductase A YP_001421579.1 2095601 R 326423 CDS YP_001421580.1 154686419 5460040 2096263..2096688 1 NC_009725.1 transcription regulator MarR family YpoP; hypothetical protein 2096688 ypoP 5460040 ypoP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421580.1 2096263 D 326423 CDS YP_001421581.1 154686420 5460041 complement(2096739..2097302) 1 NC_009725.1 hypothetical protein YpmS; hypothetical protein 2097302 ypmS 5460041 ypmS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421581.1 2096739 R 326423 CDS YP_001421582.1 154686421 5460042 complement(2097312..2098067) 1 NC_009725.1 conserved hypothetical protein YpmR; hypothetical protein 2098067 ypmR 5460042 ypmR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421582.1 2097312 R 326423 CDS YP_001421583.1 154686422 5460043 complement(2098145..2098768) 1 NC_009725.1 conserved hypothetical protein YpmQ; hypothetical protein 2098768 ypmQ 5460043 ypmQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421583.1 2098145 R 326423 CDS YP_001421584.1 154686423 5460044 complement(2098825..2099076) 1 NC_009725.1 conserved hypothetical protein YpmP; hypothetical protein 2099076 ypmP 5460044 ypmP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421584.1 2098825 R 326423 CDS YP_001421585.1 154686424 5461686 complement(2099168..2100436) 1 NC_009725.1 catalyzes the formation of 2-oxobutanoate from L-threonine; biosynthetic; threonine dehydratase 2100436 ilvA 5461686 ilvA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 threonine dehydratase YP_001421585.1 2099168 R 326423 CDS YP_001421586.1 154686425 5461687 2100621..2101613 1 NC_009725.1 sigma L dependent transcriptional regulator YplP; hypothetical protein 2101613 yplP 5461687 yplP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421586.1 2100621 D 326423 CDS YP_001421587.1 154686426 5461688 2101630..2102268 1 NC_009725.1 membrane protein, Hemolysin III homologYplQ; hypothetical protein 2102268 yplQ 5461688 yplQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421587.1 2101630 D 326423 CDS YP_001421588.1 154686427 5461689 complement(2102309..2102932) 1 NC_009725.1 hypothetical protein YpkP; hypothetical protein 2102932 ypkP 5461689 ypkP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421588.1 2102309 R 326423 CDS YP_001421589.1 154686428 5461690 complement(2102954..2103439) 1 NC_009725.1 dihydrofolate reductase DfrA; DfrA 2103439 dfrA 5461690 dfrA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DfrA YP_001421589.1 2102954 R 326423 CDS YP_001421590.1 154686429 5461691 complement(2103436..2104230) 1 NC_009725.1 ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase 2104230 thyA 5461691 thyA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 thymidylate synthase YP_001421590.1 2103436 R 326423 CDS YP_001421591.1 154686430 5459545 complement(2104330..2104938) 1 NC_009725.1 hypothetical protein YpjP; hypothetical protein 2104938 ypjP 5459545 ypjP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421591.1 2104330 R 326423 CDS YP_001421592.1 154686431 5459546 complement(2105201..2105971) 1 NC_009725.1 conserved hypothetical protein YpiP; hypothetical protein 2105971 ypiP 5459546 ypiP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421592.1 2105201 R 326423 CDS YP_001421593.1 154686432 5459547 complement(2106010..2106444) 1 NC_009725.1 conserved hypothetical protein YphP; hypothetical protein 2106444 yphP 5459547 yphP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421593.1 2106010 R 326423 CDS YP_001421594.1 154686433 5459548 complement(2106526..2108202) 1 NC_009725.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 2108202 ilvD 5459548 ilvD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 dihydroxy-acid dehydratase YP_001421594.1 2106526 R 326423 CDS YP_001421595.1 154686434 5459549 complement(2108455..2109588) 1 NC_009725.1 conserved hypothetical protein YpgR; hypothetical protein 2109588 ypgR 5459549 ypgR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421595.1 2108455 R 326423 CDS YP_001421596.1 154686435 5459550 complement(2109622..2110266) 1 NC_009725.1 conserved hypothetical protein YpgQ; hypothetical protein 2110266 ypgQ 5459550 ypgQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421596.1 2109622 R 326423 CDS YP_001421597.1 154686436 5461116 complement(2110271..2110759) 1 NC_009725.1 glutathione peroxidase BsaA; BsaA 2110759 bsaA 5461116 bsaA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 BsaA YP_001421597.1 2110271 R 326423 CDS YP_001421598.1 154686437 5461117 2111043..2111948 1 NC_009725.1 catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis; homoserine O-succinyltransferase 2111948 metA 5461117 metA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 homoserine O-succinyltransferase YP_001421598.1 2111043 D 326423 CDS YP_001421599.1 154686438 5461118 2112173..2113315 1 NC_009725.1 processive; catalyzes the formation of mono-, di- and tri-glucosyldiacylglycerol by the progressive transfer of glucosyl residues to diacylglycerol; involved in the formation of membrane glycolipids; diacylglycerol glucosyltransferase 2113315 ugtP 5461118 ugtP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 diacylglycerol glucosyltransferase YP_001421599.1 2112173 D 326423 CDS YP_001421600.1 154686439 5461119 2113536..2113736 1 NC_009725.1 cold shock protein; involved in elicitation plant basal defence; hypothetical protein 2113736 cspD 5461119 cspD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421600.1 2113536 D 326423 CDS YP_001421601.1 154686440 5461120 complement(2113788..2113970) 1 NC_009725.1 regulatory protein DegR; DegR 2113970 degR 5461120 degR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DegR YP_001421601.1 2113788 R 326423 CDS YP_001421602.1 154686441 5461121 2114133..2114390 1 NC_009725.1 hypothetical protein YpzA; hypothetical protein 2114390 ypzA 5461121 ypzA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421602.1 2114133 D 326423 CDS YP_001421603.1 154686442 5461260 complement(2114417..2114599) 1 NC_009725.1 hypothetical protein YpeQ; hypothetical protein 2114599 ypeQ 5461260 ypeQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421603.1 2114417 R 326423 CDS YP_001421604.1 154686443 5461261 complement(2114602..2115273) 1 NC_009725.1 conserved hypothetical protein YpeP; hypothetical protein 2115273 ypeP 5461261 ypeP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421604.1 2114602 R 326423 CDS YP_001421605.1 154686444 5461262 2115355..2116035 1 NC_009725.1 conserved hypothetical protein YpdP; hypothetical protein 2116035 ypdP 5461262 ypdP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421605.1 2115355 D 326423 CDS YP_001421606.1 154686445 5461263 2116039..2116434 1 NC_009725.1 ribonuclease H YpdQ; hypothetical protein 2116434 ypdQ 5461263 ypdQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421606.1 2116039 D 326423 CDS YP_001421607.1 154686446 5461264 2116486..2116614 1 NC_009725.1 small acid-soluble spore protein SspL; SspL 2116614 sspL 5461264 sspL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SspL YP_001421607.1 2116486 D 326423 CDS YP_001421608.1 154686447 5461265 complement(2116620..2117507) 1 NC_009725.1 5'-3' exonuclease YpcP; hypothetical protein 2117507 ypcP 5461265 ypcP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421608.1 2116620 R 326423 CDS YP_001421609.1 154686448 5461757 complement(2117602..2117745) 1 NC_009725.1 hypothetical protein 2117745 5461757 RBAM_020160 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421609.1 2117602 R 326423 CDS YP_001421610.1 154686449 5461758 complement(2117822..2118079) 1 NC_009725.1 hypothetical protein YpbS; hypothetical protein 2118079 ypbS 5461758 ypbS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421610.1 2117822 R 326423 CDS YP_001421611.1 154686450 5461759 complement(2118148..2121726) 1 NC_009725.1 hypothetical protein YpbR; hypothetical protein 2121726 ypbR 5461759 ypbR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421611.1 2118148 R 326423 CDS YP_001421612.1 154686451 5461760 complement(2122078..2122584) 1 NC_009725.1 conserved hypothetical protein YpbQ; hypothetical protein 2122584 ypbQ 5461760 ypbQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421612.1 2122078 R 326423 CDS YP_001421613.1 154686452 5461761 complement(2122584..2123684) 1 NC_009725.1 naringenin-chalcone synthase BcsA; BcsA 2123684 bcsA 5461761 bcsA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 BcsA YP_001421613.1 2122584 R 326423 CDS YP_001421614.1 154686453 5461762 2123848..2124456 1 NC_009725.1 hypothetical protein 2124456 5461762 RBAM_020210 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421614.1 2123848 D 326423 CDS YP_001421615.1 154686454 5459849 complement(2124484..2124792) 1 NC_009725.1 hypothetical protein 2124792 5459849 RBAM_020220 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421615.1 2124484 R 326423 CDS YP_001421616.1 154686455 5459850 2125805..2126389 1 NC_009725.1 membrane protein YdfR; hypothetical protein 2126389 ydfR 5459850 ydfR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421616.1 2125805 D 326423 CDS YP_001421617.1 154686456 5459851 complement(2126640..2127206) 1 NC_009725.1 conserved hypothetical protein YrdC; hypothetical protein 2127206 yrdC 5459851 yrdC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421617.1 2126640 R 326423 CDS YP_001421618.1 154686457 5459852 complement(2128092..2129396) 1 NC_009725.1 xanthine permease PbuX; PbuX 2129396 pbuX 5459852 pbuX Bacillus amyloliquefaciens subsp. plantarum str. FZB42 PbuX YP_001421618.1 2128092 R 326423 CDS YP_001421619.1 154686458 5459853 complement(2129393..2129977) 1 NC_009725.1 Catalyzes the transfer of the phosphoribosyl moiety from 5-phospho--D-ribosyl-1-pyrophosphate (PRib-PP) to the 6-oxo-guanine and -xanthine; xanthine phosphoribosyltransferase 2129977 xpt 5459853 xpt Bacillus amyloliquefaciens subsp. plantarum str. FZB42 xanthine phosphoribosyltransferase YP_001421619.1 2129393 R 326423 CDS YP_001421620.1 154686459 5459854 complement(2130309..2131811) 1 NC_009725.1 metallocarboxypeptidase YpwA; hypothetical protein 2131811 ypwA 5459854 ypwA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421620.1 2130309 R 326423 CDS YP_001421621.1 154686460 5463212 complement(2131923..2133842) 1 NC_009725.1 probable ATP-dependent helicase YpvA; hypothetical protein 2133842 ypvA 5463212 ypvA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421621.1 2131923 R 326423 CDS YP_001421622.1 154686461 5463213 complement(2133946..2134137) 1 NC_009725.1 hypothetical protein YptA; hypothetical protein 2134137 yptA 5463213 yptA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421622.1 2133946 R 326423 CDS YP_001421623.1 154686462 5463214 2134303..2134455 1 NC_009725.1 hypothetical protein 2134455 5463214 RBAM_020300 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421623.1 2134303 D 326423 CDS YP_001421624.1 154686463 5463215 complement(2134540..2135004) 1 NC_009725.1 hypothetical protein YqgA; hypothetical protein 2135004 yqgA 5463215 yqgA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421624.1 2134540 R 326423 CDS YP_001421625.1 154686464 5463216 complement(2135319..2136467) 1 NC_009725.1 conserved hypothetical protein YpsC; hypothetical protein 2136467 ypsC 5463216 ypsC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421625.1 2135319 R 326423 CDS YP_001421626.1 154686465 5463217 complement(2137001..2137300) 1 NC_009725.1 GpsB; guiding PBP1 shuttling; similar to DivIVA; cell division protein GpsB 2137300 ypsB 5463217 ypsB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 cell division protein GpsB YP_001421626.1 2137001 R 326423 CDS YP_001421627.1 154686466 5459551 complement(2137380..2137928) 1 NC_009725.1 conserved hypothetical protein YpsA; hypothetical protein 2137928 ypsA 5459551 ypsA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421627.1 2137380 R 326423 CDS YP_001421628.1 154686467 5459552 complement(2138017..2138253) 1 NC_009725.1 spore coat protein (inner) CotD; CotD 2138253 cotD 5459552 cotD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 CotD YP_001421628.1 2138017 R 326423 CDS YP_001421629.1 154686468 5459553 complement(2138566..2139804) 1 NC_009725.1 conserved hypothetical protein YprB; hypothetical protein 2139804 yprB 5459553 yprB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421629.1 2138566 R 326423 CDS YP_001421630.1 154686469 5459554 complement(2139824..2142070) 1 NC_009725.1 ATP-dependent RNA helicase YprA; hypothetical protein 2142070 yprA 5459554 yprA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421630.1 2139824 R 326423 CDS YP_001421631.1 154686470 5459555 complement(2142169..2142675) 1 NC_009725.1 PTS system IIA component YpqE; hypothetical protein 2142675 ypqE 5459555 ypqE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421631.1 2142169 R 326423 CDS YP_001421632.1 154686471 5459556 2142814..2143227 1 NC_009725.1 conserved hypothetical protein YpqA; hypothetical protein 2143227 ypqA 5459556 ypqA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421632.1 2142814 D 326423 CDS YP_001421633.1 154686472 5461008 complement(2143257..2143691) 1 NC_009725.1 hypothetical protein YppG; hypothetical protein 2143691 yppG 5461008 yppG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421633.1 2143257 R 326423 CDS YP_001421634.1 154686473 5461009 2143878..2144060 1 NC_009725.1 hypothetical protein YppF; hypothetical protein 2144060 yppF 5461009 yppF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421634.1 2143878 D 326423 CDS YP_001421635.1 154686474 5461010 complement(2144099..2144467) 1 NC_009725.1 hypothetical protein YppE; hypothetical protein 2144467 yppE 5461010 yppE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421635.1 2144099 R 326423 CDS YP_001421636.1 154686475 5461011 complement(2144513..2144758) 1 NC_009725.1 hypothetical protein YppD; hypothetical protein 2144758 yppD 5461011 yppD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421636.1 2144513 R 326423 CDS YP_001421637.1 154686476 5461012 2144964..2145068 1 NC_009725.1 small, acid-soluble spore protein SspM; SspM 2145068 sspM 5461012 sspM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SspM YP_001421637.1 2144964 D 326423 CDS YP_001421638.1 154686477 5461013 complement(2145112..2146068) 1 NC_009725.1 hypothetical protein YppC; hypothetical protein 2146068 yppC 5461013 yppC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421638.1 2145112 R 326423 CDS YP_001421639.1 154686478 5462015 2146116..2146724 1 NC_009725.1 functions in homologous recombination, DNA repair, and chromosome segregation; binds preferentially to three- and four-stranded DNA intermediates; introduces specific nick sites in four-stranded DNA substrates; functions similarly to Escherichia coli RuvC; Holliday junction-specific endonuclease 2146724 recU 5462015 recU Bacillus amyloliquefaciens subsp. plantarum str. FZB42 Holliday junction-specific endonuclease YP_001421639.1 2146116 D 326423 CDS YP_001421640.1 154686479 5462016 2146883..2149546 1 NC_009725.1 penicillin-binding proteins IA/IB PonA; PonA 2149546 ponA 5462016 ponA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 PonA YP_001421640.1 2146883 D 326423 CDS YP_001421641.1 154686480 5462017 complement(2149624..2150115) 1 NC_009725.1 hypothetical protein YpoC; hypothetical protein 2150115 ypoC 5462017 ypoC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421641.1 2149624 R 326423 CDS YP_001421642.1 154686481 5462018 complement(2150112..2150771) 1 NC_009725.1 probable endonuclease III (DNA-(apurinic or apyrimidinic site) lyase) Nth; hypothetical protein 2150771 nth 5462018 nth Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421642.1 2150112 R 326423 CDS YP_001421643.1 154686482 5462019 complement(2150790..2151488) 1 NC_009725.1 DNA replication protein DnaD; hypothetical protein 2151488 dnaD 5462019 dnaD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421643.1 2150790 R 326423 CDS YP_001421644.1 154686483 5462020 complement(2151583..2152875) 1 NC_009725.1 catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase 2152875 asnC 5462020 asnC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 asparaginyl-tRNA synthetase YP_001421644.1 2151583 R 326423 CDS YP_001421645.1 154686484 5461207 complement(2153010..2154191) 1 NC_009725.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 2154191 aspB 5461207 aspB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 aspartate aminotransferase YP_001421645.1 2153010 R 326423 CDS YP_001421646.1 154686485 5461208 complement(2154214..2154699) 1 NC_009725.1 hypothetical protein YpmB; hypothetical protein 2154699 ypmB 5461208 ypmB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421646.1 2154214 R 326423 CDS YP_001421647.1 154686486 5461209 complement(2154709..2154879) 1 NC_009725.1 hypothetical protein YpmA; hypothetical protein 2154879 ypmA 5461209 ypmA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421647.1 2154709 R 326423 CDS YP_001421648.1 154686487 5461210 complement(2155027..2157813) 1 NC_009725.1 unwinds DNA; bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon 2157813 dinG 5461210 dinG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon YP_001421648.1 2155027 R 326423 CDS YP_001421649.1 154686488 5461211 complement(2157935..2158318) 1 NC_009725.1 Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase 2158318 panD 5461211 panD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 aspartate alpha-decarboxylase YP_001421649.1 2157935 R 326423 CDS YP_001421650.1 154686489 5461212 complement(2158320..2159180) 1 NC_009725.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 2159180 panC 5461212 panC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 pantoate--beta-alanine ligase YP_001421650.1 2158320 R 326423 CDS YP_001421651.1 154686490 5461377 complement(2159184..2160017) 1 NC_009725.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 2160017 panB 5461377 panB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_001421651.1 2159184 R 326423 CDS YP_001421652.1 154686491 5461378 complement(2160262..2161239) 1 NC_009725.1 bifunctional protein birA; includes: Biotin operon repressor; Biotin- [acetyl-CoA-carboxylase] synthetase BirA; hypothetical protein 2161239 birA 5461378 birA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421652.1 2160262 R 326423 CDS YP_001421653.1 154686492 5461379 complement(2161224..2162414) 1 NC_009725.1 catalyzes the addition and repair of the 3'-terminal CCA sequence in tRNA; these proteins belong to the CCA-adding enzyme subfamily 2 which does not have phosphohydrolase activity; tRNA CCA-pyrophosphorylase 2162414 cca 5461379 cca Bacillus amyloliquefaciens subsp. plantarum str. FZB42 tRNA CCA-pyrophosphorylase YP_001421653.1 2161224 R 326423 CDS YP_001421654.1 154686493 5461380 complement(2162419..2163552) 1 NC_009725.1 glycosyl transferase YpjH; hypothetical protein 2163552 ypjH 5461380 ypjH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421654.1 2162419 R 326423 CDS YP_001421655.1 154686494 5461381 complement(2163549..2164262) 1 NC_009725.1 conserved hypothetical protein YpjG; hypothetical protein 2164262 ypjG 5461381 ypjG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421655.1 2163549 R 326423 CDS YP_001421656.1 154686495 5461382 complement(2164255..2164668) 1 NC_009725.1 catalyzes the formation of methylglyoxal from glycerone phosphate; methylglyoxal synthase 2164668 mgsA 5461382 mgsA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 methylglyoxal synthase YP_001421656.1 2164255 R 326423 CDS YP_001421657.1 154686496 5461680 complement(2164692..2165495) 1 NC_009725.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 2165495 dapB 5461680 dapB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 dihydrodipicolinate reductase YP_001421657.1 2164692 R 326423 CDS YP_001421658.1 154686497 5461681 complement(2165504..2165839) 1 NC_009725.1 conserved hypothetical protein YpjD; hypothetical protein 2165839 ypjD 5461681 ypjD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421658.1 2165504 R 326423 CDS YP_001421659.1 154686498 5461682 2165982..2166854 1 NC_009725.1 conserved hypothetical protein YpjC; hypothetical protein 2166854 ypjC 5461682 ypjC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421659.1 2165982 D 326423 CDS YP_001421660.1 154686499 5461683 complement(2166878..2168053) 1 NC_009725.1 oxalate decarboxylase OxdC1; OxdC1 2168053 oxdC1 5461683 oxdC1 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 OxdC1 YP_001421660.1 2166878 R 326423 CDS YP_001421661.1 154686500 5461684 complement(2168083..2168865) 1 NC_009725.1 hypothetical protein YpjB; hypothetical protein 2168865 ypjB 5461684 ypjB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421661.1 2168083 R 326423 CDS YP_001421662.1 154686501 5461685 complement(2168933..2169562) 1 NC_009725.1 conserved hypothetical protein YpjA; hypothetical protein 2169562 ypjA 5461685 ypjA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421662.1 2168933 R 326423 CDS YP_001421663.1 154686502 5462608 complement(2169634..2170401) 1 NC_009725.1 menaquinol-cytochrome c oxidoreductase (cytochrome b/c subunit) QcrC; QcrC 2170401 qcrC 5462608 qcrC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 QcrC YP_001421663.1 2169634 R 326423 CDS YP_001421664.1 154686503 5462609 complement(2170433..2171107) 1 NC_009725.1 electron transport protein; cytochrome b6 2171107 qcrB 5462609 qcrB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 cytochrome b6 YP_001421664.1 2170433 R 326423 CDS YP_001421665.1 154686504 5462610 complement(2171109..2171612) 1 NC_009725.1 menaquinol-cytochrome c reductase iron-sulfur subunit (Rieske iron-sulfur protein) QcrA; QcrA 2171612 qcrA 5462610 qcrA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 QcrA YP_001421665.1 2171109 R 326423 CDS YP_001421666.1 154686505 5462611 complement(2171750..2172196) 1 NC_009725.1 hypothetical protein YpiF; hypothetical protein 2172196 ypiF 5462611 ypiF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421666.1 2171750 R 326423 CDS YP_001421667.1 154686506 5462612 complement(2172251..2172790) 1 NC_009725.1 hypothetical protein YpiB; hypothetical protein 2172790 ypiB 5462612 ypiB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421667.1 2172251 R 326423 CDS YP_001421668.1 154686507 5462613 complement(2172864..2174135) 1 NC_009725.1 conserved hypothetical protein YpiA; hypothetical protein 2174135 ypiA 5462613 ypiA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421668.1 2172864 R 326423 CDS YP_001421669.1 154686508 5460940 complement(2174451..2175737) 1 NC_009725.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 2175737 aroE 5460940 aroE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 3-phosphoshikimate 1-carboxyvinyltransferase YP_001421669.1 2174451 R 326423 CDS YP_001421670.1 154686509 5460941 complement(2175749..2176855) 1 NC_009725.1 catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate; prephenate dehydrogenase 2176855 tyrA 5460941 tyrA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 prephenate dehydrogenase YP_001421670.1 2175749 R 326423 CDS YP_001421671.1 154686510 5460942 complement(2176916..2177998) 1 NC_009725.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 2177998 hisC 5460942 hisC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 histidinol-phosphate aminotransferase YP_001421671.1 2176916 R 326423 CDS YP_001421672.1 154686511 5460943 complement(2178010..2178807) 1 NC_009725.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 2178807 trpA 5460943 trpA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 tryptophan synthase subunit alpha YP_001421672.1 2178010 R 326423 CDS YP_001421673.1 154686512 5460944 complement(2178800..2180002) 1 NC_009725.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 2180002 trpB 5460944 trpB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 tryptophan synthase subunit beta YP_001421673.1 2178800 R 326423 CDS YP_001421674.1 154686513 5460945 complement(2179983..2180636) 1 NC_009725.1 catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis; N-(5'-phosphoribosyl)anthranilate isomerase 2180636 trpF 5460945 trpF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 N-(5'-phosphoribosyl)anthranilate isomerase YP_001421674.1 2179983 R 326423 CDS YP_001421675.1 154686514 5462028 complement(2180641..2181393) 1 NC_009725.1 involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; indole-3-glycerol-phosphate synthase 2181393 trpC 5462028 trpC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 indole-3-glycerol-phosphate synthase YP_001421675.1 2180641 R 326423 CDS YP_001421676.1 154686515 5462029 complement(2181386..2182402) 1 NC_009725.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 2182402 trpD 5462029 trpD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 anthranilate phosphoribosyltransferase YP_001421676.1 2181386 R 326423 CDS YP_001421677.1 154686516 5462030 complement(2182374..2183921) 1 NC_009725.1 with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I 2183921 trpE 5462030 trpE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 anthranilate synthase component I YP_001421677.1 2182374 R 326423 CDS YP_001421678.1 154686517 5462031 complement(2184166..2184528) 1 NC_009725.1 chorismate mutase (isozymes 1 and 2) AroH; hypothetical protein 2184528 aroH 5462031 aroH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421678.1 2184166 R 326423 CDS YP_001421679.1 154686518 5462032 complement(2184525..2185613) 1 NC_009725.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 2185613 aroB 5462032 aroB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 3-dehydroquinate synthase YP_001421679.1 2184525 R 326423 CDS YP_001421680.1 154686519 5462033 complement(2185613..2186785) 1 NC_009725.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 2186785 aroF 5462033 aroF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 chorismate synthase YP_001421680.1 2185613 R 326423 CDS YP_001421681.1 154686520 5462213 complement(2186857..2187627) 1 NC_009725.1 methyl-accepting chemotaxis proteins (MCPs) methyltransferase CheR; hypothetical protein 2187627 cheR 5462213 cheR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421681.1 2186857 R 326423 CDS YP_001421682.1 154686521 5462214 complement(2187817..2188263) 1 NC_009725.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 2188263 ndk 5462214 ndk Bacillus amyloliquefaciens subsp. plantarum str. FZB42 nucleoside diphosphate kinase YP_001421682.1 2187817 R 326423 CDS YP_001421683.1 154686522 5462215 complement(2188385..2189434) 1 NC_009725.1 heptaprenyl diphosphate synthase component II HepT; heptaprenyl diphosphate synthase subunit HepT 2189434 hepT 5462215 hepT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 heptaprenyl diphosphate synthase subunit HepT YP_001421683.1 2188385 R 326423 CDS YP_001421684.1 154686523 5462216 complement(2189376..2190077) 1 NC_009725.1 Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase 2190077 ubiE 5462216 ubiE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ubiquinone/menaquinone biosynthesis methyltransferase YP_001421684.1 2189376 R 326423 CDS YP_001421685.1 154686524 5462217 complement(2190083..2190847) 1 NC_009725.1 heptaprenyl diphosphate synthase component I HepS; HepS 2190847 hepS 5462217 hepS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 HepS YP_001421685.1 2190083 R 326423 CDS YP_001421686.1 154686525 5462218 complement(2190995..2191222) 1 NC_009725.1 tryptophan RNA-binding attenuator protein; binds leader Trp transcript causing transcription termination; transcription attenuation protein MtrB 2191222 mtrB 5462218 mtrB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 transcription attenuation protein MtrB YP_001421686.1 2190995 R 326423 CDS YP_001421687.1 154686526 5462283 complement(2191243..2191815) 1 NC_009725.1 involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I 2191815 folE 5462283 folE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GTP cyclohydrolase I YP_001421687.1 2191243 R 326423 CDS YP_001421688.1 154686527 5462284 complement(2192002..2192280) 1 NC_009725.1 DNA-binding protein II HupA; hypothetical protein 2192280 hupA 5462284 hupA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421688.1 2192002 R 326423 CDS YP_001421689.1 154686528 5462285 complement(2192655..2194166) 1 NC_009725.1 stage IV sporulation protein A (SpoIVA); SpoIVA 2194166 spoIVA 5462285 spoIVA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SpoIVA YP_001421689.1 2192655 R 326423 CDS YP_001421690.1 154686529 5462286 complement(2194319..2195053) 1 NC_009725.1 hypothetical protein YphF; hypothetical protein 2195053 yphF 5462286 yphF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421690.1 2194319 R 326423 CDS YP_001421691.1 154686530 5462287 complement(2195073..2195264) 1 NC_009725.1 hypothetical protein YphE; hypothetical protein 2195264 yphE 5462287 yphE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421691.1 2195073 R 326423 CDS YP_001421692.1 154686531 5462288 complement(2195597..2196634) 1 NC_009725.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 2196634 gpsA 5462288 gpsA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_001421692.1 2195597 R 326423 CDS YP_001421693.1 154686532 5462248 complement(2196652..2197962) 1 NC_009725.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 2197962 engA 5462248 engA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GTP-binding protein EngA YP_001421693.1 2196652 R 326423 CDS YP_001421694.1 154686533 5462249 complement(2198155..2198757) 1 NC_009725.1 conserved hypothetical protein YphA; hypothetical protein 2198757 yphA 5462249 yphA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421694.1 2198155 R 326423 CDS YP_001421695.1 154686534 5462250 complement(2199000..2200049) 1 NC_009725.1 catalyzes the isomerization of isopentenyl pyrophosphate to dimethylallyl diphosphate; isopentenyl pyrophosphate isomerase 2200049 fni 5462250 fni Bacillus amyloliquefaciens subsp. plantarum str. FZB42 isopentenyl pyrophosphate isomerase YP_001421695.1 2199000 R 326423 CDS YP_001421696.1 154686535 5462251 complement(2200064..2201212) 1 NC_009725.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 2201212 rpsA 5462251 rpsA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 30S ribosomal protein S1 YP_001421696.1 2200064 R 326423 CDS YP_001421697.1 154686536 5462252 complement(2201440..2202114) 1 NC_009725.1 Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase 2202114 cmk 5462252 cmk Bacillus amyloliquefaciens subsp. plantarum str. FZB42 cytidylate kinase YP_001421697.1 2201440 R 326423 CDS YP_001421698.1 154686537 5462253 complement(2202193..2202369) 1 NC_009725.1 hypothetical protein YpfB; hypothetical protein 2202369 ypfB 5462253 ypfB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421698.1 2202193 R 326423 CDS YP_001421699.1 154686538 5460381 complement(2203160..2204509) 1 NC_009725.1 sporulation protein YpeB; hypothetical protein 2204509 ypeB 5460381 ypeB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421699.1 2203160 R 326423 CDS YP_001421700.1 154686539 5460382 complement(2204534..2205403) 1 NC_009725.1 spore cortex-lytic enzyme SleB; hypothetical protein 2205403 sleB 5460382 sleB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421700.1 2204534 R 326423 CDS YP_001421701.1 154686540 5460383 complement(2205534..2206190) 1 NC_009725.1 conserved hypothetical protein YpdC; hypothetical protein 2206190 ypdC 5460383 ypdC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421701.1 2205534 R 326423 CDS YP_001421702.1 154686541 5460384 complement(2206287..2207270) 1 NC_009725.1 hypothetical protein YpdA; hypothetical protein 2207270 ypdA 5460384 ypdA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421702.1 2206287 R 326423 CDS YP_001421703.1 154686542 5460000 complement(2207376..2208650) 1 NC_009725.1 NAD-specific glutamate dehydrogenase GudB; GudB 2208650 gudB 5460000 gudB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GudB YP_001421703.1 2207376 R 326423 CDS YP_001421704.1 154686543 5460001 complement(2208811..2209395) 1 NC_009725.1 enables recognition and targeting of proteins for proteolysis, involved in negative regulation of competence; adaptor protein 2209395 mecB 5460001 mecB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 adaptor protein YP_001421704.1 2208811 R 326423 CDS YP_001421705.1 154686544 5460002 complement(2209547..2210335) 1 NC_009725.1 conserved hypothetical protein YpbG; hypothetical protein 2210335 ypbG 5460002 ypbG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421705.1 2209547 R 326423 CDS YP_001421706.1 154686545 5460003 complement(2210422..2210880) 1 NC_009725.1 hypothetical protein YpbF; hypothetical protein 2210880 ypbF 5460003 ypbF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421706.1 2210422 R 326423 CDS YP_001421707.1 154686546 5460004 complement(2210949..2211707) 1 NC_009725.1 conserved hypothetical protein YpbE; hypothetical protein 2211707 ypbE 5460004 ypbE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421707.1 2210949 R 326423 CDS YP_001421708.1 154686547 5460005 complement(2211685..2212239) 1 NC_009725.1 conserved hypothetical protein YpbD; hypothetical protein 2212239 ypbD 5460005 ypbD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421708.1 2211685 R 326423 CDS YP_001421709.1 154686548 5462100 complement(2212287..2213777) 1 NC_009725.1 ATP-dependent DNA helicase RecQ; RecQ 2213777 recQ 5462100 recQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 RecQ YP_001421709.1 2212287 R 326423 CDS YP_001421710.1 154686549 5462101 complement(2213770..2214828) 1 NC_009725.1 conserved hypothetical protein YpbB; hypothetical protein 2214828 ypbB 5462101 ypbB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421710.1 2213770 R 326423 CDS YP_001421711.1 154686550 5462102 2215097..2215345 1 NC_009725.1 ferredoxxin Fer; hypothetical protein 2215345 fer 5462102 fer Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421711.1 2215097 D 326423 CDS YP_001421712.1 154686551 5462103 complement(2215485..2216057) 1 NC_009725.1 conserved hypothetical protein YpaA; hypothetical protein 2216057 ypaA 5462103 ypaA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421712.1 2215485 R 326423 CDS YP_001421713.1 154686552 5462104 complement(2216226..2216321) 1 NC_009725.1 hypothetical protein YpzE; hypothetical protein 2216321 ypzE 5462104 ypzE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421713.1 2216226 R 326423 CDS YP_001421714.1 154686553 5462105 2216546..2218123 1 NC_009725.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 2218123 serA 5462105 serA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 D-3-phosphoglycerate dehydrogenase YP_001421714.1 2216546 D 326423 CDS YP_001421715.1 154686554 5460477 complement(2218170..2219273) 1 NC_009725.1 sigma-X negative effector RsiX; RsiX 2219273 rsiX 5460477 rsiX Bacillus amyloliquefaciens subsp. plantarum str. FZB42 RsiX YP_001421715.1 2218170 R 326423 CDS YP_001421716.1 154686555 5460478 complement(2219209..2219793) 1 NC_009725.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; in B. subtilis has been shown to regulate cell envelope modification and may effect antibiotic resistance; RNA polymerase sigma factor SigX 2219793 sigX 5460478 sigX Bacillus amyloliquefaciens subsp. plantarum str. FZB42 RNA polymerase sigma factor SigX YP_001421716.1 2219209 R 326423 CDS YP_001421717.1 154686556 5460479 complement(2219984..2221765) 1 NC_009725.1 two component sensor histidine kinase; COG5002; global regulation of aerobic and anaerobic respiration; transcription control of biofilm formation; ResE 2221765 resE 5460479 resE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ResE YP_001421717.1 2219984 R 326423 CDS YP_001421718.1 154686557 5460480 complement(2221762..2222484) 1 NC_009725.1 two-component response regulator; COG0745, OmpR like; RR consisting of a CheY like receiver domain and a winged helix DNA-binding domain; global regulation of aerobic and anaerobic re3spiration; hypothetical protein 2222484 resD 5460480 resD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421718.1 2221762 R 326423 CDS YP_001421719.1 154686558 5460481 complement(2222566..2223522) 1 NC_009725.1 cytochrome c-type synthesis protein ResC; ResC 2223522 resC 5460481 resC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ResC YP_001421719.1 2222566 R 326423 CDS YP_001421720.1 154686559 5460482 complement(2223760..2225388) 1 NC_009725.1 protein required for cytochrome c synthesis ResB; ResB 2225388 resB 5460482 resB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ResB YP_001421720.1 2223760 R 326423 CDS YP_001421721.1 154686560 5460305 complement(2225385..2225924) 1 NC_009725.1 catalyzes the reduction of the disulfide bonds in the heme binding site of apocytochrome c; thiol-disulfide oxidoreductase 2225924 resA 5460305 resA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 thiol-disulfide oxidoreductase YP_001421721.1 2225385 R 326423 CDS YP_001421722.1 154686561 5460306 complement(2226009..2226743) 1 NC_009725.1 ribosomal large subunit pseudouridine synthase B (RluB); RluB 2226743 rluB 5460306 rluB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 RluB YP_001421722.1 2226009 R 326423 CDS YP_001421723.1 154686562 5460307 complement(2226837..2227373) 1 NC_009725.1 spore maturation protein SpmB; hypothetical protein 2227373 spmB 5460307 spmB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421723.1 2226837 R 326423 CDS YP_001421724.1 154686563 5460308 complement(2227378..2227968) 1 NC_009725.1 spore maturation protein SpmA; hypothetical protein 2227968 spmA 5460308 spmA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421724.1 2227378 R 326423 CDS YP_001421725.1 154686564 5460309 complement(2227956..2229107) 1 NC_009725.1 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) DacB; DacB 2229107 dacB 5460309 dacB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DacB YP_001421725.1 2227956 R 326423 CDS YP_001421726.1 154686565 5460310 complement(2229220..2229750) 1 NC_009725.1 hypothetical protein YpuI; hypothetical protein 2229750 ypuI 5460310 ypuI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421726.1 2229220 R 326423 CDS YP_001421727.1 154686566 5462553 complement(2229795..2230388) 1 NC_009725.1 segregation and condensation protein B (ScpB); ScpB 2230388 scpB 5462553 scpB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ScpB YP_001421727.1 2229795 R 326423 CDS YP_001421728.1 154686567 5462554 complement(2230378..2231133) 1 NC_009725.1 functions during chromosome segregation; may form a condensin-like structure with SMC and ScpB; segregation and condensation protein A 2231133 scpA 5462554 scpA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 segregation and condensation protein A YP_001421728.1 2230378 R 326423 CDS YP_001421729.1 154686568 5462555 2231519..2232040 1 NC_009725.1 conserved hypothetical protein YpuF; hypothetical protein 2232040 ypuF 5462555 ypuF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421729.1 2231519 D 326423 CDS YP_001421730.1 154686569 5462556 complement(2232106..2232480) 1 NC_009725.1 protein involved in riboflavin biosynthesis RibTD; RibTD 2232480 ribTD 5462556 ribTD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 RibTD YP_001421730.1 2232106 R 326423 CDS YP_001421731.1 154686570 5462557 complement(2232597..2233061) 1 NC_009725.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 2233061 ribH 5462557 ribH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 6,7-dimethyl-8-ribityllumazine synthase YP_001421731.1 2232597 R 326423 CDS YP_001421732.1 154686571 5462558 complement(2233094..2234290) 1 NC_009725.1 bifunctional enzyme DHBP synthase/GTP cyclohydrolase II; functions in riboflavin synthesis; converts GTP to 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine; converts ribulose 5-phopshate to 3,4-dihydroxy-2-butanone 4-phosphate; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein 2234290 ribA 5462558 ribA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein YP_001421732.1 2233094 R 326423 CDS YP_001421733.1 154686572 5462571 complement(2234305..2234952) 1 NC_009725.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 2234952 ribE 5462571 ribE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 riboflavin synthase subunit alpha YP_001421733.1 2234305 R 326423 CDS YP_001421734.1 154686573 5462572 complement(2234933..2236048) 1 NC_009725.1 riboflavin-specific deaminase RibD; hypothetical protein 2236048 ribD 5462572 ribD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421734.1 2234933 R 326423 CDS YP_001421735.1 154686574 5462573 complement(2236446..2236790) 1 NC_009725.1 hypothetical protein YpuD; hypothetical protein 2236790 ypuD 5462573 ypuD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421735.1 2236446 R 326423 CDS YP_001421736.1 154686575 5462574 complement(2237038..2237598) 1 NC_009725.1 type I signal peptidase SipS; SipS 2237598 sipS 5462574 sipS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SipS YP_001421736.1 2237038 R 326423 CDS YP_001421737.1 154686576 5462575 complement(2237694..2238185) 1 NC_009725.1 hypothetical protein 2238185 5462575 RBAM_021450 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421737.1 2237694 R 326423 CDS YP_001421738.1 154686577 5462576 complement(2238335..2238766) 1 NC_009725.1 peptidyl-prolyl cis-trans isomerase B (PpiB); PpiB 2238766 ppiB 5462576 ppiB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 PpiB YP_001421738.1 2238335 R 326423 CDS YP_001421739.1 154686578 5461894 2239051..2239953 1 NC_009725.1 conserved hypothetical protein YpuA; hypothetical protein 2239953 ypuA 5461894 ypuA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421739.1 2239051 D 326423 CDS YP_001421740.1 154686579 5461895 complement(2239998..2241317) 1 NC_009725.1 diaminopimelate decarboxylase LysA; hypothetical protein 2241317 lysA 5461895 lysA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421740.1 2239998 R 326423 CDS YP_001421741.1 154686580 5461896 complement(2241442..2242923) 1 NC_009725.1 stage V sporulation protein AF (SpoVAF); SpoVAF 2242923 spoVAF 5461896 spoVAF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SpoVAF YP_001421741.1 2241442 R 326423 CDS YP_001421742.1 154686581 5461897 complement(2242877..2243482) 1 NC_009725.1 stage V sporulation protein AE1 (SpoVAE1); SpoVAE1 2243482 spoVAE1 5461897 spoVAE1 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SpoVAE1 YP_001421742.1 2242877 R 326423 CDS YP_001421743.1 154686582 5461898 complement(2243489..2243839) 1 NC_009725.1 stage V sporulation protein AE2 (SpoVAE2); SpoVAE2 2243839 spoVAE2 5461898 spoVAE2 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SpoVAE2 YP_001421743.1 2243489 R 326423 CDS YP_001421744.1 154686583 5461899 complement(2243840..2244856) 1 NC_009725.1 stage V sporulation protein AD (SpoVAD); stage V sporulation protein AD 2244856 spoVAD 5461899 spoVAD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 stage V sporulation protein AD YP_001421744.1 2243840 R 326423 CDS YP_001421745.1 154686584 5462219 complement(2244868..2245320) 1 NC_009725.1 stage V sporulation protein AC (SpoVAC); hypothetical protein 2245320 spoVAC 5462219 spoVAC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421745.1 2244868 R 326423 CDS YP_001421746.1 154686585 5462220 complement(2245333..2245758) 1 NC_009725.1 stage V sporulation protein AB (SpoVAB); SpoVAB 2245758 spoVAB 5462220 spoVAB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SpoVAB YP_001421746.1 2245333 R 326423 CDS YP_001421747.1 154686586 5462221 complement(2245748..2246368) 1 NC_009725.1 stage V sporulation protein AA (SpoVAA); SpoVAA 2246368 spoVAA 5462221 spoVAA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SpoVAA YP_001421747.1 2245748 R 326423 CDS YP_001421748.1 154686587 5462222 complement(2246495..2247262) 1 NC_009725.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed in the prespore at the onset of sporulation. Interaction with spoIIAB inhibits sigma F activity throughout the cell before the formation of the asymmetric septum; after septation the interaction is confined to the mother cell, and sigma F activity is released in the prespore.; sporulation sigma factor SigF 2247262 sigF 5462222 sigF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 sporulation sigma factor SigF YP_001421748.1 2246495 R 326423 CDS YP_001421749.1 154686588 5462223 complement(2247274..2247714) 1 NC_009725.1 binds to sigma F preventing its association with RNA polymerase during sporulation; anti-sigma F factor 2247714 spoIIAB 5462223 spoIIAB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 anti-sigma F factor YP_001421749.1 2247274 R 326423 CDS YP_001421750.1 154686589 5462224 complement(2247711..2248064) 1 NC_009725.1 anti-sigma F factor antagonist SpoIIAA; hypothetical protein 2248064 spoIIAA 5462224 spoIIAA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421750.1 2247711 R 326423 CDS YP_001421751.1 154686590 5460579 complement(2248160..2249329) 1 NC_009725.1 penicilin binding protein ( D-alanyl-D-alanine carboxypeptidase) DacF; DacF 2249329 dacF 5460579 dacF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DacF YP_001421751.1 2248160 R 326423 CDS YP_001421752.1 154686591 5460580 complement(2249466..2250284) 1 NC_009725.1 catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation; purine nucleoside phosphorylase 2250284 punA 5460580 punA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 purine nucleoside phosphorylase YP_001421752.1 2249466 R 326423 CDS YP_001421753.1 154686592 5460581 complement(2250296..2251483) 1 NC_009725.1 catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose; phosphopentomutase 2251483 drm 5460581 drm Bacillus amyloliquefaciens subsp. plantarum str. FZB42 phosphopentomutase YP_001421753.1 2250296 R 326423 CDS YP_001421754.1 154686593 5460582 complement(2251648..2252538) 1 NC_009725.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerD 2252538 xerD 5460582 xerD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 site-specific tyrosine recombinase XerD YP_001421754.1 2251648 R 326423 CDS YP_001421755.1 154686594 5460583 complement(2252546..2252773) 1 NC_009725.1 hypothetical protein 2252773 5460583 RBAM_021630 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421755.1 2252546 R 326423 CDS YP_001421756.1 154686595 5460584 complement(2252889..2253338) 1 NC_009725.1 ferric uptake regulation protein Fur; hypothetical protein 2253338 fur 5460584 fur Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421756.1 2252889 R 326423 CDS YP_001421757.1 154686596 5461002 complement(2253451..2254095) 1 NC_009725.1 stage II sporulation protein M (SpoIIM); hypothetical protein 2254095 spoIIM 5461002 spoIIM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421757.1 2253451 R 326423 CDS YP_001421758.1 154686597 5461003 complement(2254172..2254399) 1 NC_009725.1 hypothetical protein YqkK; hypothetical protein 2254399 yqkK 5461003 yqkK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421758.1 2254172 R 326423 CDS YP_001421759.1 154686598 5461004 complement(2254456..2254746) 1 NC_009725.1 hypothetical protein 2254746 5461004 RBAM_021670 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421759.1 2254456 R 326423 CDS YP_001421760.1 154686599 5461005 complement(2254859..2256172) 1 NC_009725.1 malolactic enzyme MleA; MleA 2256172 mleA 5461005 mleA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 MleA YP_001421760.1 2254859 R 326423 CDS YP_001421761.1 154686600 5461006 complement(2256185..2257591) 1 NC_009725.1 malate-H+/Na+-lactate antiporter MleN; MleN 2257591 mleN 5461006 mleN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 MleN YP_001421761.1 2256185 R 326423 CDS YP_001421762.1 154686601 5461007 complement(2257733..2259160) 1 NC_009725.1 catalyzes the formation of fumarate from aspartate; aspartate ammonia-lyase 2259160 aspA 5461007 aspA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 aspartate ammonia-lyase YP_001421762.1 2257733 R 326423 CDS YP_001421763.1 154686602 5460718 complement(2259198..2260187) 1 NC_009725.1 L-asparaginase AnsA; AnsA 2260187 ansA 5460718 ansA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 AnsA YP_001421763.1 2259198 R 326423 CDS YP_001421764.1 154686603 5460719 2260364..2260717 1 NC_009725.1 HTH-type transcriptional regulator AnsR (Ans operon repressor); AnsR 2260717 ansR 5460719 ansR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 AnsR YP_001421764.1 2260364 D 326423 CDS YP_001421765.1 154686604 5460720 complement(2260728..2261891) 1 NC_009725.1 conserved hypothetical protein YqxK; hypothetical protein 2261891 yqxK 5460720 yqxK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421765.1 2260728 R 326423 CDS YP_001421766.1 154686605 5460721 complement(2261891..2262448) 1 NC_009725.1 ADP-ribose pyrophosphatase NudF; NudF 2262448 nudF 5460721 nudF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 NudF YP_001421766.1 2261891 R 326423 CDS YP_001421767.1 154686606 5460722 2262709..2263629 1 NC_009725.1 conserved hypothetical protein YqkF; hypothetical protein 2263629 yqkF 5460722 yqkF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421767.1 2262709 D 326423 CDS YP_001421768.1 154686607 5460723 complement(2263662..2263889) 1 NC_009725.1 hypothetical protein YqkE; hypothetical protein 2263889 yqkE 5460723 yqkE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421768.1 2263662 R 326423 CDS YP_001421769.1 154686608 5459876 2263990..2264922 1 NC_009725.1 hypothetical protein YqkD; hypothetical protein 2264922 yqkD 5459876 yqkD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421769.1 2263990 D 326423 CDS YP_001421770.1 154686609 5459877 complement(2264962..2265201) 1 NC_009725.1 hypothetical protein YqkC; hypothetical protein 2265201 yqkC 5459877 yqkC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421770.1 2264962 R 326423 CDS YP_001421771.1 154686610 5459878 complement(2265176..2265538) 1 NC_009725.1 conserved hypothetical protein YqkB; hypothetical protein 2265538 yqkB 5459878 yqkB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421771.1 2265176 R 326423 CDS YP_001421772.1 154686611 5459879 complement(2265629..2266579) 1 NC_009725.1 conserved hypothetical protein YqkA; hypothetical protein 2266579 yqkA 5459879 yqkA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421772.1 2265629 R 326423 CDS YP_001421773.1 154686612 5459880 complement(2266576..2266920) 1 NC_009725.1 hypothetical protein YqjZ; hypothetical protein 2266920 yqjZ 5459880 yqjZ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421773.1 2266576 R 326423 CDS YP_001421774.1 154686613 5459881 complement(2266933..2267403) 1 NC_009725.1 conserved hypothetical protein YqjY; hypothetical protein 2267403 yqjY 5459881 yqjY Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421774.1 2266933 R 326423 CDS YP_001421775.1 154686614 5459607 2267619..2268845 1 NC_009725.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV 2268845 yqjW 5459607 yqjW Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DNA polymerase IV YP_001421775.1 2267619 D 326423 CDS YP_001421776.1 154686615 5459608 2268861..2269205 1 NC_009725.1 hypothetical protein YqjX; hypothetical protein 2269205 yqjX 5459608 yqjX Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421776.1 2268861 D 326423 CDS YP_001421777.1 154686616 5459609 2269303..2269512 1 NC_009725.1 hypothetical protein YqzH; hypothetical protein 2269512 yqzH 5459609 yqzH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421777.1 2269303 D 326423 CDS YP_001421778.1 154686617 5459610 2269585..2270667 1 NC_009725.1 hypothetical protein 2270667 5459610 RBAM_021860 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421778.1 2269585 D 326423 CDS YP_001421779.1 154686618 5459611 2270748..2270915 1 NC_009725.1 hypothetical protein 2270915 5459611 RBAM_021870 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421779.1 2270748 D 326423 CDS YP_001421780.1 154686619 5459612 complement(2270917..2271309) 1 NC_009725.1 conserved hypothetical protein YqjT; hypothetical protein 2271309 yqjT 5459612 yqjT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421780.1 2270917 R 326423 CDS YP_001421781.1 154686620 5460191 complement(2271331..2272290) 1 NC_009725.1 catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis; pantothenate kinase 2272290 coaA 5460191 coaA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 pantothenate kinase YP_001421781.1 2271331 R 326423 CDS YP_001421782.1 154686621 5460192 complement(2272366..2273715) 1 NC_009725.1 catalyzes the formation of pyruvate from serine; D-serine dehydratase 2273715 dsdA 5460192 dsdA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 D-serine dehydratase YP_001421782.1 2272366 R 326423 CDS YP_001421783.1 154686622 5460193 complement(2273732..2274508) 1 NC_009725.1 oxidoreductase YqjQ; hypothetical protein 2274508 yqjQ 5460193 yqjQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421783.1 2273732 R 326423 CDS YP_001421784.1 154686623 5460194 complement(2274514..2275470) 1 NC_009725.1 conserved hypothetical protein YqjP; hypothetical protein 2275470 yqjP 5460194 yqjP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421784.1 2274514 R 326423 CDS YP_001421785.1 154686624 5460195 2275867..2276706 1 NC_009725.1 pyrroline-5-carboxylate reductase II ProI; ProI 2276706 proI 5460195 proI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ProI YP_001421785.1 2275867 D 326423 CDS YP_001421786.1 154686625 5460196 complement(2276743..2277489) 1 NC_009725.1 difficidin synthesis; involved in polyketide production; polyketide biosynthesis enoyl-CoA hydratase 2277489 dfnM 5460196 dfnM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 polyketide biosynthesis enoyl-CoA hydratase YP_001421786.1 2276743 R 326423 CDS YP_001421787.1 154686626 5459539 complement(2277549..2278796) 1 NC_009725.1 difficidin synthesis; hydroxymethylglutaryl-coenzyme A synthase; DfnL 2278796 dfnL 5459539 dfnL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DfnL YP_001421787.1 2277549 R 326423 CDS YP_001421788.1 154686627 5459540 complement(2278854..2280008) 1 NC_009725.1 difficidin synthesis; cytochrome P450 'oxidase'; DfnK 2280008 dfnK 5459540 dfnK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DfnK YP_001421788.1 2278854 R 326423 CDS YP_001421789.1 154686628 5459541 complement(2280090..2286305) 1 NC_009725.1 difficidin synthesis; modular polyketide synthase of type I; DfnJ 2286305 dfnJ 5459541 dfnJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DfnJ YP_001421789.1 2280090 R 326423 CDS YP_001421790.1 154686629 5459542 complement(2286302..2292454) 1 NC_009725.1 difficidin synthesis; modular polyketide synthase of type I; DfnI 2292454 dfnI 5459542 dfnI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DfnI YP_001421790.1 2286302 R 326423 CDS YP_001421791.1 154686630 5459543 complement(2292477..2300195) 1 NC_009725.1 difficidin synthesis; modular polyketide synthase of type I; DfnH 2300195 dfnH 5459543 dfnH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DfnH YP_001421791.1 2292477 R 326423 CDS YP_001421792.1 154686631 5459544 complement(2300200..2315814) 1 NC_009725.1 difficidin synthesis; modular polyketide synthase of type I; DfnG 2315814 dfnG 5459544 dfnG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DfnG YP_001421792.1 2300200 R 326423 CDS YP_001421793.1 154686632 5459714 complement(2315866..2321592) 1 NC_009725.1 difficidin synthesis; modular polyketide synthase of type I; DfnF 2321592 dfnF 5459714 dfnF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DfnF YP_001421793.1 2315866 R 326423 CDS YP_001421794.1 154686633 5459715 complement(2321632..2327928) 1 NC_009725.1 difficidin synthesis; modular polyketide synthase of type I; DfnE 2327928 dfnE 5459715 dfnE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DfnE YP_001421794.1 2321632 R 326423 CDS YP_001421795.1 154686634 5459716 complement(2327947..2340537) 1 NC_009725.1 difficidin synthesis; modular polyketide synthase of type I; DfnD 2340537 dfnD 5459716 dfnD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DfnD YP_001421795.1 2327947 R 326423 CDS YP_001421796.1 154686635 5459717 complement(2340577..2341314) 1 NC_009725.1 difficidin synthesis; beta-ketoacyl-acyl carrier protein reductase; DfnC 2341314 dfnC 5459717 dfnC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DfnC YP_001421796.1 2340577 R 326423 CDS YP_001421797.1 154686636 5459718 complement(2341329..2342660) 1 NC_009725.1 difficidin synthesis; acyl-CoA synthetase; DfnB 2342660 dfnB 5459718 dfnB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DfnB YP_001421797.1 2341329 R 326423 CDS YP_001421798.1 154686637 5459719 complement(2342690..2342962) 1 NC_009725.1 hypothetical protein probably involved in difficidin synthesis; DfnX 2342962 dfnX 5459719 dfnX Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DfnX YP_001421798.1 2342690 R 326423 CDS YP_001421799.1 154686638 5459989 complement(2342987..2343967) 1 NC_009725.1 difficidin synthesis; DfnY 2343967 dfnY 5459989 dfnY Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DfnY YP_001421799.1 2342987 R 326423 CDS YP_001421800.1 154686639 5459990 complement(2344008..2346266) 1 NC_009725.1 difficidin synthesis; acyltransferase/oxidoreductase; DfnA 2346266 dfnA 5459990 dfnA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DfnA YP_001421800.1 2344008 R 326423 CDS YP_001421801.1 154686640 5459991 2347000..2347530 1 NC_009725.1 transcription antiterminator 2347530 5459991 RBAM_022090 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 transcription antiterminator YP_001421801.1 2347000 D 326423 CDS YP_001421802.1 154686641 5459992 complement(2347874..2348752) 1 NC_009725.1 LysR family transcriptional regulator 2348752 5459992 RBAM_022100 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 LysR family transcriptional regulator YP_001421802.1 2347874 R 326423 CDS YP_001421803.1 154686642 5459993 2348891..2349214 1 NC_009725.1 hypothetical protein 2349214 5459993 RBAM_022110 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421803.1 2348891 D 326423 CDS YP_001421804.1 154686643 5459994 2349353..2350369 1 NC_009725.1 catalyzes the reduction of alpha, beta-unsaturated aldehydes and ketones; reduces the nitro group nitroester and nitroaromatic compounds; NADPH dehydrogenase NamA 2350369 yqjM 5459994 yqjM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 NADPH dehydrogenase NamA YP_001421804.1 2349353 D 326423 CDS YP_001421805.1 154686644 5463013 2350483..2351256 1 NC_009725.1 hypothetical protein YqjL; hypothetical protein 2351256 yqjL 5463013 yqjL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421805.1 2350483 D 326423 CDS YP_001421806.1 154686645 5463014 complement(2351306..2351455) 1 NC_009725.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 2351455 rpmG 5463014 rpmG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 50S ribosomal protein L33 YP_001421806.1 2351306 R 326423 CDS YP_001421807.1 154686646 5463015 complement(2351534..2352460) 1 NC_009725.1 member of metallo-beta-lactamase family; the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase; in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not; associates with two zinc ions; ribonuclease Z 2352460 rnz 5463015 rnz Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ribonuclease Z YP_001421807.1 2351534 R 326423 CDS YP_001421808.1 154686647 5463016 2352669..2354138 1 NC_009725.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 2354138 zwf 5463016 zwf Bacillus amyloliquefaciens subsp. plantarum str. FZB42 glucose-6-phosphate 1-dehydrogenase YP_001421808.1 2352669 D 326423 CDS YP_001421809.1 154686648 5463017 complement(2354228..2355637) 1 NC_009725.1 catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; 6-phosphogluconate dehydrogenase 2355637 yqjI 5463017 yqjI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 6-phosphogluconate dehydrogenase YP_001421809.1 2354228 R 326423 CDS YP_001421810.1 154686649 5463018 complement(2355746..2356990) 1 NC_009725.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV 2356990 yqjH 5463018 yqjH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DNA polymerase IV YP_001421810.1 2355746 R 326423 CDS YP_001421811.1 154686650 5459952 2357066..2357347 1 NC_009725.1 hypothetical protein YqzJ; hypothetical protein 2357347 yqzJ 5459952 yqzJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421811.1 2357066 D 326423 CDS YP_001421812.1 154686651 5459953 2357380..2358216 1 NC_009725.1 involved in biogenesis of membrane proteins; Firmicutes specific proteins are shorter than other bacterial counterparts and have a signal peptide and lipid attachment site; OxaA-like protein precursor 2358216 yqjG 5459953 yqjG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 OxaA-like protein precursor YP_001421812.1 2357380 D 326423 CDS YP_001421813.1 154686652 5459954 complement(2358330..2359445) 1 NC_009725.1 conserved hypothetical protein YqjE; hypothetical protein 2359445 yqjE 5459954 yqjE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421813.1 2358330 R 326423 CDS YP_001421814.1 154686653 5459955 complement(2359462..2360985) 1 NC_009725.1 propionyl-CoA carboxylase beta chain (PCCase) YqjD; hypothetical protein 2360985 yqjD 5459955 yqjD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421814.1 2359462 R 326423 CDS YP_001421815.1 154686654 5459956 complement(2360972..2361400) 1 NC_009725.1 conserved hypothetical protein YqjC; hypothetical protein 2361400 yqjC 5459956 yqjC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421815.1 2360972 R 326423 CDS YP_001421816.1 154686655 5459957 complement(2361603..2362133) 1 NC_009725.1 conserved hypothetical protein YqjB; hypothetical protein 2362133 yqjB 5459957 yqjB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421816.1 2361603 R 326423 CDS YP_001421817.1 154686656 5462330 complement(2362203..2363156) 1 NC_009725.1 conserved hypothetical protein YqjA; hypothetical protein 2363156 yqjA 5462330 yqjA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421817.1 2362203 R 326423 CDS YP_001421818.1 154686657 5462331 complement(2363233..2363955) 1 NC_009725.1 amino acid ABC transporter (ATP-binding protein) YqiZ; hypothetical protein 2363955 yqiZ 5462331 yqiZ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421818.1 2363233 R 326423 CDS YP_001421819.1 154686658 5462332 complement(2363948..2364607) 1 NC_009725.1 amino acid ABC transporter (permease) YqiY; hypothetical protein 2364607 yqiY 5462332 yqiY Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421819.1 2363948 R 326423 CDS YP_001421820.1 154686659 5462333 complement(2364669..2365436) 1 NC_009725.1 amino acid ABC transporter (binding protein) YqiX; hypothetical protein 2365436 yqiX 5462333 yqiX Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421820.1 2364669 R 326423 CDS YP_001421821.1 154686660 5462334 complement(2365682..2366113) 1 NC_009725.1 conserved hypothetical protein YqiW; hypothetical protein 2366113 yqiW 5462334 yqiW Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421821.1 2365682 R 326423 CDS YP_001421822.1 154686661 5462335 2366298..2367194 1 NC_009725.1 multidrug resistance protein BmrU; hypothetical protein 2367194 bmrU 5462335 bmrU Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421822.1 2366298 D 326423 CDS YP_001421823.1 154686662 5461504 complement(2367239..2368501) 1 NC_009725.1 branched-chain alpha-keto acid dehydrogenase E2 subunit (lipoamide acyltransferase) BkdB; branched-chain alpha-keto acid dehydrogenase subunit E2 2368501 bkdB 5461504 bkdB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 branched-chain alpha-keto acid dehydrogenase subunit E2 YP_001421823.1 2367239 R 326423 CDS YP_001421824.1 154686663 5461505 complement(2368523..2369506) 1 NC_009725.1 branched-chain alpha-keto acid dehydrogenase E1 subunit (2-oxoisovalerate dehydrogenase beta) BkdAB; BkdAB 2369506 bkdAB 5461505 bkdAB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 BkdAB YP_001421824.1 2368523 R 326423 CDS YP_001421825.1 154686664 5461506 complement(2369519..2370511) 1 NC_009725.1 branched-chain alpha-keto acid dehydrogenase E1 subunit (2-oxoisovalerate dehydrogenase alpha) bBkdAA; BkdAA 2370511 bkdAA 5461506 bkdAA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 BkdAA YP_001421825.1 2369519 R 326423 CDS YP_001421826.1 154686665 5461507 complement(2370534..2371955) 1 NC_009725.1 E3 component of the branched-chain alpha-keto acid dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 2371955 lpdV 5461507 lpdV Bacillus amyloliquefaciens subsp. plantarum str. FZB42 dihydrolipoamide dehydrogenase YP_001421826.1 2370534 R 326423 CDS YP_001421827.1 154686666 5461508 complement(2371945..2373054) 1 NC_009725.1 catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate; butyrate kinase 2373054 buk 5461508 buk Bacillus amyloliquefaciens subsp. plantarum str. FZB42 butyrate kinase YP_001421827.1 2371945 R 326423 CDS YP_001421828.1 154686667 5461509 complement(2373078..2374172) 1 NC_009725.1 leucine dehydrogenase Bcd; glutamate dehydrogenase/leucine dehydrogenase family protein 2374172 bcd 5461509 bcd Bacillus amyloliquefaciens subsp. plantarum str. FZB42 glutamate dehydrogenase/leucine dehydrogenase family protein YP_001421828.1 2373078 R 326423 CDS YP_001421829.1 154686668 5459588 complement(2374186..2375079) 1 NC_009725.1 catalyzes the synthesis of butanoylphosphate from butanoyl-CoA and inorganic phosphate; phosphate butyryltransferase 2375079 ptb 5459588 ptb Bacillus amyloliquefaciens subsp. plantarum str. FZB42 phosphate butyryltransferase YP_001421829.1 2374186 R 326423 CDS YP_001421830.1 154686669 5459589 complement(2375202..2377271) 1 NC_009725.1 sigma-L-dependent transcriptional regulator BkdR; BkdR 2377271 bkdR 5459589 bkdR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 BkdR YP_001421830.1 2375202 R 326423 CDS YP_001421831.1 154686670 5459590 2377425..2377667 1 NC_009725.1 hypothetical protein YqzF; hypothetical protein 2377667 yqzF 5459590 yqzF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421831.1 2377425 D 326423 CDS YP_001421832.1 154686671 5459591 complement(2377696..2378601) 1 NC_009725.1 carboxyvinyl-carboxyphosphonate phosphorylmutase YqiQ; hypothetical protein 2378601 yqiQ 5459591 yqiQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421832.1 2377696 R 326423 CDS YP_001421833.1 154686672 5459592 complement(2378620..2380047) 1 NC_009725.1 functions in propionate metabolism; involved in isomerization of (2S,3S)-methylcitrate to (2R,3S)-methylisocitrate; also encodes minor aconitase or dehydratase activity; aconitase C; 2-methylcitrate dehydratase 2380047 prpD 5459592 prpD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 2-methylcitrate dehydratase YP_001421833.1 2378620 R 326423 CDS YP_001421834.1 154686673 5459593 complement(2380073..2381170) 1 NC_009725.1 forms citrate from oxaloacetate and acetyl-CoA; functions in TCA cycle, glyoxylate cycle and respiration; citrate synthase 3 2381170 mmgD 5459593 mmgD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 citrate synthase 3 YP_001421834.1 2380073 R 326423 CDS YP_001421835.1 154686674 5462713 complement(2381194..2382327) 1 NC_009725.1 acyl-CoA dehydrogenase MmgC; MmgC 2382327 mmgC 5462713 mmgC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 MmgC YP_001421835.1 2381194 R 326423 CDS YP_001421836.1 154686675 5462714 complement(2382357..2383208) 1 NC_009725.1 3-hydroxybutyryl-CoA dehydrogenase MmgB; MmgB 2383208 mmgB 5462714 mmgB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 MmgB YP_001421836.1 2382357 R 326423 CDS YP_001421837.1 154686676 5462715 complement(2383228..2384409) 1 NC_009725.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 2384409 mmgA 5462715 mmgA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 acetyl-CoA acetyltransferase YP_001421837.1 2383228 R 326423 CDS YP_001421838.1 154686677 5462716 complement(2384549..2385286) 1 NC_009725.1 glycerophosphodiester phosphodiesterase YqiK; hypothetical protein 2385286 yqiK 5462716 yqiK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421838.1 2384549 R 326423 CDS YP_001421839.1 154686678 5462717 complement(2385374..2386000) 1 NC_009725.1 N-acetylmuramoyl-L-alanine amidase YqiI; hypothetical protein 2386000 yqiI 5462717 yqiI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421839.1 2385374 R 326423 CDS YP_001421840.1 154686679 5462718 complement(2386019..2386312) 1 NC_009725.1 hypothetical protein YqiH; hypothetical protein 2386312 yqiH 5462718 yqiH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421840.1 2386019 R 326423 CDS YP_001421841.1 154686680 5461659 complement(2386645..2387268) 1 NC_009725.1 hypothetical protein 2387268 5461659 RBAM_022490 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421841.1 2386645 R 326423 CDS YP_001421842.1 154686681 5461660 2387415..2388047 1 NC_009725.1 hypothetical protein 2388047 5461660 RBAM_022500 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421842.1 2387415 D 326423 CDS YP_001421843.1 154686682 5461661 2388131..2388481 1 NC_009725.1 hypothetical protein 2388481 5461661 RBAM_022510 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421843.1 2388131 D 326423 CDS YP_001421844.1 154686683 5461662 2388572..2389693 1 NC_009725.1 NADH-dependent flavin oxidoreductase YqiG; hypothetical protein 2389693 yqiG 5461662 yqiG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421844.1 2388572 D 326423 CDS YP_001421845.1 154686684 5461663 2390159..2390371 1 NC_009725.1 hypothetical protein 2390371 5461663 RBAM_022530 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421845.1 2390159 D 326423 CDS YP_001421846.1 154686685 5461664 2390548..2391729 1 NC_009725.1 alanine racemase YncD; hypothetical protein 2391729 yncD 5461664 yncD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421846.1 2390548 D 326423 CDS YP_001421847.1 154686686 5462336 complement(2391878..2392678) 1 NC_009725.1 master regulator of initiation of sporulation; cd00156; involved in initiation of biofilm formation; Spo0A 2392678 spo0A 5462336 spo0A Bacillus amyloliquefaciens subsp. plantarum str. FZB42 Spo0A YP_001421847.1 2391878 R 326423 CDS YP_001421848.1 154686687 5462337 complement(2392959..2394239) 1 NC_009725.1 stage IV sporulation protein SpoIVB; SpoIVB 2394239 spoIVB 5462337 spoIVB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SpoIVB YP_001421848.1 2392959 R 326423 CDS YP_001421849.1 154686688 5462338 complement(2394403..2396133) 1 NC_009725.1 DNA repair protein RecN; hypothetical protein 2396133 recN 5462338 recN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421849.1 2394403 R 326423 CDS YP_001421850.1 154686689 5462339 complement(2396165..2396614) 1 NC_009725.1 regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes; arginine repressor 2396614 ahrC 5462339 ahrC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 arginine repressor YP_001421850.1 2396165 R 326423 CDS YP_001421851.1 154686690 5462340 complement(2396711..2397556) 1 NC_009725.1 conserved hypothetical protein YqxC; hypothetical protein 2397556 yqxC 5462340 yqxC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421851.1 2396711 R 326423 CDS YP_001421852.1 154686691 5462341 complement(2397553..2399454) 1 NC_009725.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 2399454 dxs 5462341 dxs Bacillus amyloliquefaciens subsp. plantarum str. FZB42 1-deoxy-D-xylulose-5-phosphate synthase YP_001421852.1 2397553 R 326423 CDS YP_001421853.1 154686692 5459557 complement(2399598..2400488) 1 NC_009725.1 geranyltranstransferase YqiD; hypothetical protein 2400488 yqiD 5459557 yqiD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421853.1 2399598 R 326423 CDS YP_001421854.1 154686693 5459558 complement(2400478..2400732) 1 NC_009725.1 catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit 2400732 xseB 5459558 xseB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 exodeoxyribonuclease VII small subunit YP_001421854.1 2400478 R 326423 CDS YP_001421855.1 154686694 5459559 complement(2400732..2402093) 1 NC_009725.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 2402093 xseA 5459559 xseA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 exodeoxyribonuclease VII large subunit YP_001421855.1 2400732 R 326423 CDS YP_001421856.1 154686695 5459560 complement(2402199..2403050) 1 NC_009725.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 2403050 folD 5459560 folD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase YP_001421856.1 2402199 R 326423 CDS YP_001421857.1 154686696 5459561 complement(2403062..2403454) 1 NC_009725.1 Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 2403454 nusB 5459561 nusB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 transcription antitermination protein NusB YP_001421857.1 2403062 R 326423 CDS YP_001421858.1 154686697 5459562 complement(2403719..2404126) 1 NC_009725.1 conserved hypothetical protein YqhY; hypothetical protein 2404126 yqhY 5459562 yqhY Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421858.1 2403719 R 326423 CDS YP_001421859.1 154686698 5460614 complement(2404148..2405500) 1 NC_009725.1 an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit 2405500 accC 5460614 accC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 acetyl-CoA carboxylase biotin carboxylase subunit YP_001421859.1 2404148 R 326423 CDS YP_001421860.1 154686699 5460615 complement(2405515..2405994) 1 NC_009725.1 composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit 2405994 accB 5460615 accB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit YP_001421860.1 2405515 R 326423 CDS YP_001421861.1 154686700 5460616 complement(2406148..2406798) 1 NC_009725.1 stage III sporulation protein AH (SpoIIIAH); SpoIIIAH 2406798 spoIIIAH 5460616 spoIIIAH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SpoIIIAH YP_001421861.1 2406148 R 326423 CDS YP_001421862.1 154686701 5460617 complement(2406802..2407494) 1 NC_009725.1 stage III sporulation protein AG (SpoIIIAG); SpoIIIAG 2407494 spoIIIAG 5460617 spoIIIAG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SpoIIIAG YP_001421862.1 2406802 R 326423 CDS YP_001421863.1 154686702 5460618 complement(2407487..2408107) 1 NC_009725.1 stage III sporulation protein AF (SpoIIIAF); SpoIIIAF 2408107 spoIIIAF 5460618 spoIIIAF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SpoIIIAF YP_001421863.1 2407487 R 326423 CDS YP_001421864.1 154686703 5460619 complement(2408124..2409332) 1 NC_009725.1 stage III sporulation protein AE (SpoIIIAE); SpoIIIAE 2409332 spoIIIAE 5460619 spoIIIAE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SpoIIIAE YP_001421864.1 2408124 R 326423 CDS YP_001421865.1 154686704 5460132 complement(2409365..2409667) 1 NC_009725.1 stage III sporulation protein AD (SpoIIIAD); SpoIIIAD 2409667 spoIIIAD 5460132 spoIIIAD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SpoIIIAD YP_001421865.1 2409365 R 326423 CDS YP_001421866.1 154686705 5460133 complement(2409767..2409973) 1 NC_009725.1 stage III sporulation protein AC (SpoIIIAC); SpoIIIAC 2409973 spoIIIAC 5460133 spoIIIAC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SpoIIIAC YP_001421866.1 2409767 R 326423 CDS YP_001421867.1 154686706 5460134 complement(2409996..2410511) 1 NC_009725.1 necessary for complete engulfment of forespore; stage III sporulation protein SpoAB 2410511 spoIIIAB 5460134 spoIIIAB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 stage III sporulation protein SpoAB YP_001421867.1 2409996 R 326423 CDS YP_001421868.1 154686707 5460135 complement(2410505..2411428) 1 NC_009725.1 stage III sporulation protein SpoIIIAA; hypothetical protein 2411428 spoIIIAA 5460135 spoIIIAA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421868.1 2410505 R 326423 CDS YP_001421869.1 154686708 5460136 complement(2411506..2411787) 1 NC_009725.1 hypothetical protein YqhV; hypothetical protein 2411787 yqhV 5460136 yqhV Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421869.1 2411506 R 326423 CDS YP_001421870.1 154686709 5460137 complement(2411933..2412490) 1 NC_009725.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 2412490 efp 5460137 efp Bacillus amyloliquefaciens subsp. plantarum str. FZB42 elongation factor P YP_001421870.1 2411933 R 326423 CDS YP_001421871.1 154686710 5463001 complement(2412515..2413576) 1 NC_009725.1 dipeptidase YqhT; hypothetical protein 2413576 yqhT 5463001 yqhT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421871.1 2412515 R 326423 CDS YP_001421872.1 154686711 5463002 complement(2413708..2414238) 1 NC_009725.1 hypothetical protein YqhR; hypothetical protein 2414238 yqhR 5463002 yqhR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421872.1 2413708 R 326423 CDS YP_001421873.1 154686712 5463003 2414460..2415416 1 NC_009725.1 conserved hypothetical protein YqhQ; hypothetical protein 2415416 yqhQ 5463003 yqhQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421873.1 2414460 D 326423 CDS YP_001421874.1 154686713 5463004 2415451..2415846 1 NC_009725.1 hypothetical protein YqhP; hypothetical protein 2415846 yqhP 5463004 yqhP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421874.1 2415451 D 326423 CDS YP_001421875.1 154686714 5463005 complement(2415843..2416718) 1 NC_009725.1 conserved hypothetical protein YqhO; hypothetical protein 2416718 yqhO 5463005 yqhO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421875.1 2415843 R 326423 CDS YP_001421876.1 154686715 5463006 complement(2416833..2417261) 1 NC_009725.1 involved in manganese homeostasis; activates the transcription of the mntABCD operon; manganese transport transcriptional regulator 2417261 mntR 5463006 mntR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 manganese transport transcriptional regulator YP_001421876.1 2416833 R 326423 CDS YP_001421877.1 154686716 5461358 complement(2417361..2418197) 1 NC_009725.1 conserved hypothetical protein YqhM; hypothetical protein 2418197 yqhM 5461358 yqhM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421877.1 2417361 R 326423 CDS YP_001421878.1 154686717 5461359 2418390..2418770 1 NC_009725.1 conserved hypothetical protein YqhL; hypothetical protein 2418770 yqhL 5461359 yqhL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421878.1 2418390 D 326423 CDS YP_001421879.1 154686718 5461360 complement(2418822..2420297) 1 NC_009725.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein; glycine dehydrogenase subunit 2 2420297 gcvPB 5461360 gcvPB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 glycine dehydrogenase subunit 2 YP_001421879.1 2418822 R 326423 CDS YP_001421880.1 154686719 5461361 complement(2420290..2421636) 1 NC_009725.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 2 to form the P protein; glycine dehydrogenase subunit 1 2421636 gcvPA 5461361 gcvPA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 glycine dehydrogenase subunit 1 YP_001421880.1 2420290 R 326423 CDS YP_001421881.1 154686720 5461362 complement(2421651..2422751) 1 NC_009725.1 catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T 2422751 gcvT 5461362 gcvT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 glycine cleavage system aminomethyltransferase T YP_001421881.1 2421651 R 326423 CDS YP_001421882.1 154686721 5461363 2423175..2424845 1 NC_009725.1 SNF2 helicase YqhH; hypothetical protein 2424845 yqhH 5461363 yqhH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421882.1 2423175 D 326423 CDS YP_001421883.1 154686722 5461802 2424867..2425661 1 NC_009725.1 hypothetical protein YqhG; hypothetical protein 2425661 yqhG 5461802 yqhG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421883.1 2424867 D 326423 CDS YP_001421884.1 154686723 5461803 2425838..2426011 1 NC_009725.1 antagonist of SinR; transcription control of biofilm formation; SinI 2426011 sinI 5461803 sinI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SinI YP_001421884.1 2425838 D 326423 CDS YP_001421885.1 154686724 5461804 2426039..2426380 1 NC_009725.1 HTH-type transcriptional regulator; master regulator of biofilm formation; SinR 2426380 sinR 5461804 sinR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SinR YP_001421885.1 2426039 D 326423 CDS YP_001421886.1 154686725 5461805 complement(2426428..2427213) 1 NC_009725.1 spore coat associated protein N; major protein component of extracellular matrix, required for development of complex colony architecture; TasA 2427213 tasA 5461805 tasA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 TasA YP_001421886.1 2426428 R 326423 CDS YP_001421887.1 154686726 5461806 complement(2427278..2427862) 1 NC_009725.1 type I signal peptidase; involved in processing of TasA; SipW 2427862 sipW 5461806 sipW Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SipW YP_001421887.1 2427278 R 326423 CDS YP_001421888.1 154686727 5461807 complement(2427834..2428505) 1 NC_009725.1 member of the yqxM-sipW-tasA operon, essential for biofilm formation and controled by sinR; hypothetical protein 2428505 yqxM 5461807 yqxM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421888.1 2427834 R 326423 CDS YP_001421889.1 154686728 5460471 2428764..2429093 1 NC_009725.1 hypothetical protein YqzG; hypothetical protein 2429093 yqzG 5460471 yqzG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421889.1 2428764 D 326423 CDS YP_001421890.1 154686729 5460472 complement(2429133..2429312) 1 NC_009725.1 hypothetical protein YqzE; hypothetical protein 2429312 yqzE 5460472 yqzE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421890.1 2429133 R 326423 CDS YP_001421891.1 154686730 5460473 complement(2429369..2429746) 1 NC_009725.1 DNA transport machinery protein ComGG; ComGG 2429746 comGG 5460473 comGG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ComGG YP_001421891.1 2429369 R 326423 CDS YP_001421892.1 154686731 5460474 complement(2429747..2430247) 1 NC_009725.1 probably part of the DNA transport machinery ComGF; ComGF 2430247 comGF 5460474 comGF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ComGF YP_001421892.1 2429747 R 326423 CDS YP_001421893.1 154686732 5460475 complement(2430156..2430470) 1 NC_009725.1 DNA transport machinery protein ComGE; ComGE 2430470 comGE 5460475 comGE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ComGE YP_001421893.1 2430156 R 326423 CDS YP_001421894.1 154686733 5460476 complement(2430454..2430891) 1 NC_009725.1 DNA transport machinery protein ComGD; ComGD 2430891 comGD 5460476 comGD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ComGD YP_001421894.1 2430454 R 326423 CDS YP_001421895.1 154686734 5460693 complement(2430881..2431189) 1 NC_009725.1 exogenous DNA-binding (competence) ComGC; ComGC 2431189 comGC 5460693 comGC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ComGC YP_001421895.1 2430881 R 326423 CDS YP_001421896.1 154686735 5460694 complement(2431194..2432231) 1 NC_009725.1 DNA transport machinery protein ComGB; ComGB 2432231 comGB 5460694 comGB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ComGB YP_001421896.1 2431194 R 326423 CDS YP_001421897.1 154686736 5460695 complement(2432218..2433288) 1 NC_009725.1 protein required for exogenous DNA-binding (competence) ComGA; ComGA 2433288 comGA 5460695 comGA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ComGA YP_001421897.1 2432218 R 326423 CDS YP_001421898.1 154686737 5460696 complement(2433485..2434435) 1 NC_009725.1 conserved hypothetical protein YqxL; hypothetical protein 2434435 yqxL 5460696 yqxL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421898.1 2433485 R 326423 CDS YP_001421899.1 154686738 5460697 2434581..2435882 1 NC_009725.1 conserved hypothetical protein YqhB; hypothetical protein 2435882 yqhB 5460697 yqhB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421899.1 2434581 D 326423 CDS YP_001421900.1 154686739 5460698 complement(2435920..2436750) 1 NC_009725.1 conserved hypothetical protein YqhA; hypothetical protein 2436750 yqhA 5460698 yqhA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421900.1 2435920 R 326423 CDS YP_001421901.1 154686740 5462864 complement(2436957..2437337) 1 NC_009725.1 conserved hypothetical protein YqgZ; hypothetical protein 2437337 yqgZ 5462864 yqgZ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421901.1 2436957 R 326423 CDS YP_001421902.1 154686741 5462865 2437574..2437819 1 NC_009725.1 hypothetical protein YqgY; hypothetical protein 2437819 yqgY 5462865 yqgY Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421902.1 2437574 D 326423 CDS YP_001421903.1 154686742 5462866 complement(2437859..2438497) 1 NC_009725.1 conserved hypothetical protein YqgX; hypothetical protein 2438497 yqgX 5462866 yqgX Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421903.1 2437859 R 326423 CDS YP_001421904.1 154686743 5462867 2438652..2438825 1 NC_009725.1 hypothetical protein YqgW; hypothetical protein 2438825 yqgW 5462867 yqgW Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421904.1 2438652 D 326423 CDS YP_001421905.1 154686744 5462452 complement(2438858..2439172) 1 NC_009725.1 conserved hypothetical protein YqgV; hypothetical protein 2439172 yqgV 5462452 yqgV Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421905.1 2438858 R 326423 CDS YP_001421906.1 154686745 5462453 complement(2439178..2440230) 1 NC_009725.1 hypothetical protein YqgU; hypothetical protein 2440230 yqgU 5462453 yqgU Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421906.1 2439178 R 326423 CDS YP_001421907.1 154686746 5462454 complement(2440288..2441415) 1 NC_009725.1 conserved hypothetical protein YqgT; hypothetical protein 2441415 yqgT 5462454 yqgT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421907.1 2440288 R 326423 CDS YP_001421908.1 154686747 5462455 complement(2441498..2442460) 1 NC_009725.1 glucose kinase GlcK; GlcK 2442460 glcK 5462455 glcK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GlcK YP_001421908.1 2441498 R 326423 CDS YP_001421909.1 154686748 5462456 complement(2442495..2442692) 1 NC_009725.1 conserved hypothetical protein YqgQ; hypothetical protein 2442692 yqgQ 5462456 yqgQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421909.1 2442495 R 326423 CDS YP_001421910.1 154686749 5462457 2442902..2444266 1 NC_009725.1 Na+/H+ antiporter NhaC; hypothetical protein 2444266 nhaC 5462457 nhaC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421910.1 2442902 D 326423 CDS YP_001421911.1 154686750 5462398 complement(2444342..2444515) 1 NC_009725.1 hypothetical protein YqgO; hypothetical protein 2444515 yqgO 5462398 yqgO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421911.1 2444342 R 326423 CDS YP_001421912.1 154686751 5462399 complement(2444586..2445140) 1 NC_009725.1 conserved hypothetical protein YqgN; hypothetical protein 2445140 yqgN 5462399 yqgN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421912.1 2444586 R 326423 CDS YP_001421913.1 154686752 5462400 complement(2445219..2445368) 1 NC_009725.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 2445368 rpmG 5462400 rpmG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 50S ribosomal protein L33 YP_001421913.1 2445219 R 326423 CDS YP_001421914.1 154686753 5462401 2445715..2446068 1 NC_009725.1 hypothetical protein YqzD; hypothetical protein 2446068 yqzD 5462401 yqzD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421914.1 2445715 D 326423 CDS YP_001421915.1 154686754 5462402 2446065..2446529 1 NC_009725.1 hypothetical protein YqzC; hypothetical protein 2446529 yqzC 5462402 yqzC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421915.1 2446065 D 326423 CDS YP_001421916.1 154686755 5462403 complement(2446628..2447410) 1 NC_009725.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate ABC transporter ATP-binding protein 2447410 pstBB 5462403 pstBB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 phosphate ABC transporter ATP-binding protein YP_001421916.1 2446628 R 326423 CDS YP_001421917.1 154686756 5459786 complement(2447422..2448228) 1 NC_009725.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate ABC transporter ATP-binding protein 2448228 pstBA 5459786 pstBA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 phosphate ABC transporter ATP-binding protein YP_001421917.1 2447422 R 326423 CDS YP_001421918.1 154686757 5459787 complement(2448247..2449131) 1 NC_009725.1 phosphate ABC transporter (permease) PstA; hypothetical protein 2449131 pstA 5459787 pstA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421918.1 2448247 R 326423 CDS YP_001421919.1 154686758 5459788 complement(2449131..2450060) 1 NC_009725.1 phosphate ABC transporter (permease) YqgH; hypothetical protein 2450060 yqgH 5459788 yqgH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421919.1 2449131 R 326423 CDS YP_001421920.1 154686759 5459789 complement(2450109..2451011) 1 NC_009725.1 phosphate ABC transporter (binding protein) PstS; hypothetical protein 2451011 pstS 5459789 pstS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421920.1 2450109 R 326423 CDS YP_001421921.1 154686760 5459790 2451243..2451575 1 NC_009725.1 hypothetical protein 2451575 5459790 RBAM_023300 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421921.1 2451243 D 326423 CDS YP_001421922.1 154686761 5459791 2451581..2452393 1 NC_009725.1 transposase 2452393 5459791 RBAM_023310 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 transposase YP_001421922.1 2451581 D 326423 CDS YP_001421923.1 154686762 5459792 complement(2452456..2454603) 1 NC_009725.1 penicillin-binding protein IIA (PbpA); PbpA 2454603 pbpA 5459792 pbpA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 PbpA YP_001421923.1 2452456 R 326423 CDS YP_001421924.1 154686763 5459793 complement(2454705..2455994) 1 NC_009725.1 hypothetical protein YqgE; hypothetical protein 2455994 yqgE 5459793 yqgE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421924.1 2454705 R 326423 CDS YP_001421925.1 154686764 5459794 complement(2456114..2456719) 1 NC_009725.1 superoxide dismutase [Mn] SodA; downregulation by plant root exudate; hypothetical protein 2456719 sodA 5459794 sodA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421925.1 2456114 R 326423 CDS YP_001421926.1 154686765 5459795 complement(2456885..2457367) 1 NC_009725.1 conserved hypothetical protein YqgC; hypothetical protein 2457367 yqgC 5459795 yqgC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421926.1 2456885 R 326423 CDS YP_001421927.1 154686766 5459796 2457529..2458290 1 NC_009725.1 conserved hypothetical protein YqgB; hypothetical protein 2458290 yqgB 5459796 yqgB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421927.1 2457529 D 326423 CDS YP_001421928.1 154686767 5459797 2458382..2458684 1 NC_009725.1 conserved hypothetical protein YqfZ; hypothetical protein 2458684 yqfZ 5459797 yqfZ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421928.1 2458382 D 326423 CDS YP_001421929.1 154686768 5460151 2458808..2459935 1 NC_009725.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 2459935 ispG 5460151 ispG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_001421929.1 2458808 D 326423 CDS YP_001421930.1 154686769 5460152 complement(2459969..2460340) 1 NC_009725.1 hypothetical protein YqfX; hypothetical protein 2460340 yqfX 5460152 yqfX Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421930.1 2459969 R 326423 CDS YP_001421931.1 154686770 5460153 2460480..2461061 1 NC_009725.1 conserved hypothetical protein YqfW; hypothetical protein 2461061 yqfW 5460153 yqfW Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421931.1 2460480 D 326423 CDS YP_001421932.1 154686771 5460154 complement(2461092..2461502) 1 NC_009725.1 zinc-specific metallo-regulatory protein Zur; Zur 2461502 zur 5460154 zur Bacillus amyloliquefaciens subsp. plantarum str. FZB42 Zur YP_001421932.1 2461092 R 326423 CDS YP_001421933.1 154686772 5460155 complement(2461626..2462507) 1 NC_009725.1 conserved hypothetical protein YqfU; hypothetical protein 2462507 yqfU 5460155 yqfU Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421933.1 2461626 R 326423 CDS YP_001421934.1 154686773 5460156 2462626..2462880 1 NC_009725.1 hypothetical protein YqfT; hypothetical protein 2462880 yqfT 5460156 yqfT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421934.1 2462626 D 326423 CDS YP_001421935.1 154686774 5461457 complement(2462913..2463806) 1 NC_009725.1 Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues; endonuclease IV 2463806 yqfS 5461457 yqfS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 endonuclease IV YP_001421935.1 2462913 R 326423 CDS YP_001421936.1 154686775 5461458 complement(2463818..2465134) 1 NC_009725.1 ATP-dependent RNA helicase YqfR; hypothetical protein 2465134 yqfR 5461458 yqfR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421936.1 2463818 R 326423 CDS YP_001421937.1 154686776 5461459 2465300..2465995 1 NC_009725.1 hypothetical protein YqfQ; hypothetical protein 2465995 yqfQ 5461459 yqfQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421937.1 2465300 D 326423 CDS YP_001421938.1 154686777 5461460 2466118..2467062 1 NC_009725.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2467062 ispH 5461460 ispH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_001421938.1 2466118 D 326423 CDS YP_001421939.1 154686778 5461461 complement(2467083..2468204) 1 NC_009725.1 conserved hypothetical protein YqfO; hypothetical protein 2468204 yqfO 5461461 yqfO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421939.1 2467083 R 326423 CDS YP_001421940.1 154686779 5461462 complement(2468197..2468901) 1 NC_009725.1 conserved hypothetical protein YqfN; hypothetical protein 2468901 yqfN 5461462 yqfN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421940.1 2468197 R 326423 CDS YP_001421941.1 154686780 5460975 complement(2469027..2469389) 1 NC_009725.1 cytochrome c550 CccA; CccA 2469389 cccA 5460975 cccA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 CccA YP_001421941.1 2469027 R 326423 CDS YP_001421942.1 154686781 5460976 complement(2469740..2470861) 1 NC_009725.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; primary sigma factor of bacterium; RNA polymerase sigma factor RpoD 2470861 rpoD 5460976 rpoD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 RNA polymerase sigma factor RpoD YP_001421942.1 2469740 R 326423 CDS YP_001421943.1 154686782 5460977 complement(2471054..2472865) 1 NC_009725.1 synthesizes RNA primers at the replication forks; DNA primase 2472865 dnaG 5460977 dnaG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DNA primase YP_001421943.1 2471054 R 326423 CDS YP_001421944.1 154686783 5460978 complement(2472887..2473393) 1 NC_009725.1 conserved hypothetical protein YqxD; hypothetical protein 2473393 yqxD 5460978 yqxD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421944.1 2472887 R 326423 CDS YP_001421945.1 154686784 5460979 complement(2473649..2474461) 1 NC_009725.1 conserved hypothetical protein YqfL; hypothetical protein 2474461 yqfL 5460979 yqfL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421945.1 2473649 R 326423 CDS YP_001421946.1 154686785 5460980 complement(2474487..2475128) 1 NC_009725.1 conserved hypothetical protein YqzB; hypothetical protein 2475128 yqzB 5460980 yqzB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421946.1 2474487 R 326423 CDS YP_001421947.1 154686786 5461364 complement(2475226..2477265) 1 NC_009725.1 glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta 2477265 glyS 5461364 glyS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 glycyl-tRNA synthetase subunit beta YP_001421947.1 2475226 R 326423 CDS YP_001421948.1 154686787 5461365 complement(2477258..2478145) 1 NC_009725.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 2478145 glyQ 5461365 glyQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 glycyl-tRNA synthetase subunit alpha YP_001421948.1 2477258 R 326423 CDS YP_001421949.1 154686788 5461366 complement(2478447..2479214) 1 NC_009725.1 involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO 2479214 recO 5461366 recO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DNA repair protein RecO YP_001421949.1 2478447 R 326423 CDS YP_001421950.1 154686789 5461367 complement(2479549..2480454) 1 NC_009725.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 2480454 era 5461367 era Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GTP-binding protein Era YP_001421950.1 2479549 R 326423 CDS YP_001421951.1 154686790 5461368 complement(2480435..2480845) 1 NC_009725.1 cytidine deaminase Cdd; hypothetical protein 2480845 cdd 5461368 cdd Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421951.1 2480435 R 326423 CDS YP_001421952.1 154686791 5461369 complement(2480969..2481349) 1 NC_009725.1 diacylglycerol kinase DgkA; hypothetical protein 2481349 dgkA 5461369 dgkA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421952.1 2480969 R 326423 CDS YP_001421953.1 154686792 5459726 complement(2481324..2481797) 1 NC_009725.1 conserved hypothetical protein YqfG; metalloprotease 2481797 yqfG 5459726 yqfG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 metalloprotease YP_001421953.1 2481324 R 326423 CDS YP_001421954.1 154686793 5459727 complement(2481798..2483930) 1 NC_009725.1 conserved hypothetical protein YqfF; hypothetical protein 2483930 yqfF 5459727 yqfF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421954.1 2481798 R 326423 CDS YP_001421955.1 154686794 5459728 complement(2484011..2484970) 1 NC_009725.1 phosphate starvation-induced protein PhoH; hypothetical protein 2484970 phoH 5459728 phoH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421955.1 2484011 R 326423 CDS YP_001421956.1 154686795 5459729 complement(2484974..2486158) 1 NC_009725.1 conserved hypothetical protein YqfD; hypothetical protein 2486158 yqfD 5459729 yqfD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421956.1 2484974 R 326423 CDS YP_001421957.1 154686796 5459730 complement(2486176..2486457) 1 NC_009725.1 conserved hypothetical protein YqfC; hypothetical protein 2486457 yqfC 5459730 yqfC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421957.1 2486176 R 326423 CDS YP_001421958.1 154686797 5459731 complement(2486514..2486948) 1 NC_009725.1 hypothetical protein YqfB; hypothetical protein 2486948 yqfB 5459731 yqfB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421958.1 2486514 R 326423 CDS YP_001421959.1 154686798 5462034 complement(2486976..2487968) 1 NC_009725.1 conserved hypothetical protein YqfA; hypothetical protein 2487968 yqfA 5462034 yqfA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421959.1 2486976 R 326423 CDS YP_001421960.1 154686799 5462035 complement(2487993..2489309) 1 NC_009725.1 conserved hypothetical protein YqeZ; hypothetical protein 2489309 yqeZ 5462035 yqeZ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421960.1 2487993 R 326423 CDS YP_001421961.1 154686800 5462036 complement(2489432..2489878) 1 NC_009725.1 conserved hypothetical protein YqeY; hypothetical protein 2489878 yqeY 5462036 yqeY Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421961.1 2489432 R 326423 CDS YP_001421962.1 154686801 5462037 complement(2489893..2490066) 1 NC_009725.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 2490066 rpsU 5462037 rpsU Bacillus amyloliquefaciens subsp. plantarum str. FZB42 30S ribosomal protein S21 YP_001421962.1 2489893 R 326423 CDS YP_001421963.1 154686802 5462038 2490229..2491164 1 NC_009725.1 conserved hypothetical protein YqeW; hypothetical protein 2491164 yqeW 5462038 yqeW Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421963.1 2490229 D 326423 CDS YP_001421964.1 154686803 5462039 complement(2491201..2492556) 1 NC_009725.1 conserved hypothetical protein YqeV; hypothetical protein 2492556 yqeV 5462039 yqeV Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421964.1 2491201 R 326423 CDS YP_001421965.1 154686804 5460808 complement(2492556..2493326) 1 NC_009725.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 2493326 yqeU 5460808 yqeU Bacillus amyloliquefaciens subsp. plantarum str. FZB42 16S ribosomal RNA methyltransferase RsmE YP_001421965.1 2492556 R 326423 CDS YP_001421966.1 154686805 5460809 complement(2493349..2494284) 1 NC_009725.1 methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; ribosomal protein L11 methyltransferase 2494284 prmA 5460809 prmA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ribosomal protein L11 methyltransferase YP_001421966.1 2493349 R 326423 CDS YP_001421967.1 154686806 5460810 complement(2494308..2495435) 1 NC_009725.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; molecular chaperone DnaJ 2495435 dnaJ 5460810 dnaJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 molecular chaperone DnaJ YP_001421967.1 2494308 R 326423 CDS YP_001421968.1 154686807 5460811 complement(2495621..2497459) 1 NC_009725.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 2497459 dnaK 5460811 dnaK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 molecular chaperone DnaK YP_001421968.1 2495621 R 326423 CDS YP_001421969.1 154686808 5460812 complement(2497484..2498059) 1 NC_009725.1 with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE 2498059 grpE 5460812 grpE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 heat shock protein GrpE YP_001421969.1 2497484 R 326423 CDS YP_001421970.1 154686809 5460813 complement(2498119..2499150) 1 NC_009725.1 Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor 2499150 hrcA 5460813 hrcA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 heat-inducible transcription repressor YP_001421970.1 2498119 R 326423 CDS YP_001421971.1 154686810 5462825 complement(2499231..2500370) 1 NC_009725.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 2500370 hemN 5462825 hemN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 coproporphyrinogen III oxidase YP_001421971.1 2499231 R 326423 CDS YP_001421972.1 154686811 5462826 complement(2500430..2502265) 1 NC_009725.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 2502265 lepA 5462826 lepA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GTP-binding protein LepA YP_001421972.1 2500430 R 326423 CDS YP_001421973.1 154686812 5462827 complement(2502398..2502736) 1 NC_009725.1 hypothetical protein YqxA; hypothetical protein 2502736 yqxA 5462827 yqxA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421973.1 2502398 R 326423 CDS YP_001421974.1 154686813 5462828 complement(2502753..2503946) 1 NC_009725.1 stage II sporulation P (SpoIIP); hypothetical protein 2503946 spoIIP 5462828 spoIIP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421974.1 2502753 R 326423 CDS YP_001421975.1 154686814 5462829 complement(2504014..2505120) 1 NC_009725.1 Initiates the rapid degradation of small, acid-soluble proteins during spore germination; germination protease 2505120 gpr 5462829 gpr Bacillus amyloliquefaciens subsp. plantarum str. FZB42 germination protease YP_001421975.1 2504014 R 326423 CDS YP_001421976.1 154686815 5462830 2505323..2505589 1 NC_009725.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 2505589 rpsT 5462830 rpsT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 30S ribosomal protein S20 YP_001421976.1 2505323 D 326423 CDS YP_001421977.1 154686816 5460672 complement(2505625..2506647) 1 NC_009725.1 required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta 2506647 holA 5460672 holA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DNA polymerase III subunit delta YP_001421977.1 2505625 R 326423 CDS YP_001421978.1 154686817 5460673 complement(2507032..2509383) 1 NC_009725.1 integral membrane protein ComEC; hypothetical protein 2509383 comEC 5460673 comEC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421978.1 2507032 R 326423 CDS YP_001421979.1 154686818 5460674 complement(2509384..2509953) 1 NC_009725.1 protein required for DNA binding and uptake (competence) ComEB; hypothetical protein 2509953 comEB 5460674 comEB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421979.1 2509384 R 326423 CDS YP_001421980.1 154686819 5460675 complement(2510020..2510634) 1 NC_009725.1 unspecific high-affinity DNA-binding protein ComEA; hypothetical protein 2510634 comEA 5460675 comEA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421980.1 2510020 R 326423 CDS YP_001421981.1 154686820 5460676 2510693..2511514 1 NC_009725.1 may be involved in regulation of competence genes; late competence protein ComER 2511514 comER 5460676 comER Bacillus amyloliquefaciens subsp. plantarum str. FZB42 late competence protein ComER YP_001421981.1 2510693 D 326423 CDS YP_001421982.1 154686821 5460677 complement(2511583..2512320) 1 NC_009725.1 hypothetical protein YqeM; hypothetical protein 2512320 yqeM 5460677 yqeM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421982.1 2511583 R 326423 CDS YP_001421983.1 154686822 5460532 complement(2512317..2512673) 1 NC_009725.1 conserved hypothetical protein YqeL; hypothetical protein 2512673 yqeL 5460532 yqeL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421983.1 2512317 R 326423 CDS YP_001421984.1 154686823 5460533 complement(2512690..2513250) 1 NC_009725.1 HD phosphatase; predicted role in NAD metabolism; hypothetical protein 2513250 yqeK 5460533 yqeK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421984.1 2512690 R 326423 CDS YP_001421985.1 154686824 5460534 complement(2513240..2513809) 1 NC_009725.1 transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria; nicotinic acid mononucleotide adenylyltransferase 2513809 nadD 5460534 nadD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 nicotinic acid mononucleotide adenylyltransferase YP_001421985.1 2513240 R 326423 CDS YP_001421986.1 154686825 5460535 complement(2513820..2514110) 1 NC_009725.1 conserved hypothetical protein YqeI; hypothetical protein 2514110 yqeI 5460535 yqeI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421986.1 2513820 R 326423 CDS YP_001421987.1 154686826 5460536 complement(2514104..2514946) 1 NC_009725.1 AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase 2514946 aroE 5460536 aroE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 shikimate 5-dehydrogenase YP_001421987.1 2514104 R 326423 CDS YP_001421988.1 154686827 5460537 complement(2514966..2516066) 1 NC_009725.1 in Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis; GTP-binding protein YqeH 2516066 yqeH 5460537 yqeH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GTP-binding protein YqeH YP_001421988.1 2514966 R 326423 CDS YP_001421989.1 154686828 5462508 complement(2516069..2516587) 1 NC_009725.1 conserved hypothetical protein YqeG; hypothetical protein 2516587 yqeG 5462508 yqeG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421989.1 2516069 R 326423 CDS YP_001421990.1 154686829 5462509 2516945..2517085 1 NC_009725.1 sporulation inhibitor Sda; Sda 2517085 sda 5462509 sda Bacillus amyloliquefaciens subsp. plantarum str. FZB42 Sda YP_001421990.1 2516945 D 326423 CDS YP_001421991.1 154686830 5462510 complement(2517428..2518159) 1 NC_009725.1 conserved hypothetical protein Yqe; hypothetical protein 2518159 yqeF 5462510 yqeF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421991.1 2517428 R 326423 CDS YP_001421992.1 154686831 5462511 complement(2518229..2518963) 1 NC_009725.1 polysaccharide deacetylase 2518963 5462511 RBAM_024010 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 polysaccharide deacetylase YP_001421992.1 2518229 R 326423 CDS YP_001421993.1 154686832 5462512 2519197..2519823 1 NC_009725.1 conserved hypothetical protein YqeD; hypothetical protein 2519823 yqeD 5462512 yqeD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421993.1 2519197 D 326423 CDS YP_001421994.1 154686833 5462513 complement(2520136..2521392) 1 NC_009725.1 hypothetical protein 2521392 5462513 RBAM_024030 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421994.1 2520136 R 326423 CDS YP_001421995.1 154686834 5460324 2521850..2522572 1 NC_009725.1 sigma-28; sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed in the mother cell after engulfment; sporulation sigma factor SigK 2522572 spoIIIC 5460324 spoIIIC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 sporulation sigma factor SigK YP_001421995.1 2521850 D 326423 CDS YP_001421996.1 154686835 5460325 2523046..2523888 1 NC_009725.1 hypothetical protein 2523888 5460325 RBAM_024050 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421996.1 2523046 D 326423 CDS YP_001421997.1 154686836 5460326 2523885..2524412 1 NC_009725.1 hypothetical protein 2524412 5460326 RBAM_024060 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421997.1 2523885 D 326423 CDS YP_001421998.1 154686837 5460327 complement(2524702..2525118) 1 NC_009725.1 conserved hypothetical protein YrkR; phosphate-starvation-inducible protein PsiE 2525118 yrkR 5460327 yrkR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 phosphate-starvation-inducible protein PsiE YP_001421998.1 2524702 R 326423 CDS YP_001421999.1 154686838 5460328 complement(2525164..2526462) 1 NC_009725.1 two-component sensor histidine kinase; cd00082, HisKA, Histidine kinase A (dimerization/phosphoacceptor) domain; hypothetical protein 2526462 yrkQ 5460328 yrkQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001421999.1 2525164 R 326423 CDS YP_001422000.1 154686839 5460329 complement(2526449..2527144) 1 NC_009725.1 two-component response regulator; COG0745, OmpR, RR consisting of a CheY-like receiver domain and a winged helix dNA-binding domain; hypothetical protein 2527144 yrkP 5460329 yrkP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422000.1 2526449 R 326423 CDS YP_001422001.1 154686840 5461150 2527411..2528628 1 NC_009725.1 conserved hypothetical protein YrkO; hypothetical protein 2528628 yrkO 5461150 yrkO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422001.1 2527411 D 326423 CDS YP_001422002.1 154686841 5461151 2529102..2529653 1 NC_009725.1 conserved hypothetical protein YrkN; hypothetical protein 2529653 yrkN 5461151 yrkN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422002.1 2529102 D 326423 CDS YP_001422003.1 154686842 5461152 complement(2530134..2530667) 1 NC_009725.1 conserved hypothetical protein YqaC; hypothetical protein 2530667 yqaC 5461152 yqaC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422003.1 2530134 R 326423 CDS YP_001422004.1 154686843 5461153 complement(2530832..2531311) 1 NC_009725.1 hypothetical protein YyaR; hypothetical protein 2531311 yyaR 5461153 yyaR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422004.1 2530832 R 326423 CDS YP_001422005.1 154686844 5461154 complement(2531464..2531964) 1 NC_009725.1 conserved hypothetical protein YrdA; hypothetical protein 2531964 yrdA 5461154 yrdA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422005.1 2531464 R 326423 CDS YP_001422006.1 154686845 5461155 complement(2532182..2532514) 1 NC_009725.1 hypothetical protein 2532514 5461155 RBAM_024150 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422006.1 2532182 R 326423 CDS YP_001422007.1 154686846 5461540 complement(2532688..2533491) 1 NC_009725.1 hydrolase 2533491 5461540 RBAM_024160 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hydrolase YP_001422007.1 2532688 R 326423 CDS YP_001422008.1 154686847 5461541 complement(2533524..2534336) 1 NC_009725.1 hypothetical protein 2534336 5461541 RBAM_024170 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422008.1 2533524 R 326423 CDS YP_001422009.1 154686848 5461542 2534573..2535298 1 NC_009725.1 hypothetical protein 2535298 5461542 RBAM_024180 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422009.1 2534573 D 326423 CDS YP_001422010.1 154686849 5461543 complement(2535393..2536340) 1 NC_009725.1 mannose-6-phosphate isomerase ManA; hypothetical protein 2536340 manA 5461543 manA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422010.1 2535393 R 326423 CDS YP_001422011.1 154686850 5461544 complement(2536355..2538313) 1 NC_009725.1 phosphotransferase system (PTS) mannose-specificenzyme IIBCA component ManP; ManP 2538313 manP 5461544 manP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ManP YP_001422011.1 2536355 R 326423 CDS YP_001422012.1 154686851 5461545 complement(2538466..2540418) 1 NC_009725.1 mannose operon transcriptional antiterminator ManR; ManR 2540418 manR 5461545 manR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ManR YP_001422012.1 2538466 R 326423 CDS YP_001422013.1 154686852 5460357 complement(2540648..2541565) 1 NC_009725.1 hypothetical protein 2541565 5460357 RBAM_024220 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422013.1 2540648 R 326423 CDS YP_001422014.1 154686853 5460358 complement(2541610..2542092) 1 NC_009725.1 transcription regulator YjdI; hypothetical protein 2542092 yjdI 5460358 yjdI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422014.1 2541610 R 326423 CDS YP_001422015.1 154686854 5460359 complement(2542160..2543044) 1 NC_009725.1 HTH-type transcriptional regulator 2543044 5460359 RBAM_024240 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 HTH-type transcriptional regulator YP_001422015.1 2542160 R 326423 CDS YP_001422016.1 154686855 5460360 2543169..2544377 1 NC_009725.1 hypothetical transport protein yYybF1; hypothetical protein 2544377 yybF1 5460360 yybF1 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422016.1 2543169 D 326423 CDS YP_001422017.1 154686856 5460361 complement(2544527..2547688) 1 NC_009725.1 cytochrome P450/NADPH-cytochrome P450reductase YrhJ; hypothetical protein 2547688 yrhJ 5460361 yrhJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422017.1 2544527 R 326423 CDS YP_001422018.1 154686857 5460362 complement(2547716..2548318) 1 NC_009725.1 conserved hypothetical protein YrhI; hypothetical protein 2548318 yrhI 5460362 yrhI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422018.1 2547716 R 326423 CDS YP_001422019.1 154686858 5461647 complement(2548492..2549031) 1 NC_009725.1 hypothetical protein YrhH; hypothetical protein 2549031 yrhH 5461647 yrhH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422019.1 2548492 R 326423 CDS YP_001422020.1 154686859 5461648 complement(2549532..2549672) 1 NC_009725.1 conserved hypothetical protein YrzI; hypothetical protein 2549672 yrzI 5461648 yrzI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422020.1 2549532 R 326423 CDS YP_001422021.1 154686860 5461649 complement(2550062..2550862) 1 NC_009725.1 formate transporter YrhG; hypothetical protein 2550862 yrhG 5461649 yrhG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422021.1 2550062 R 326423 CDS YP_001422022.1 154686861 5461650 complement(2551129..2551497) 1 NC_009725.1 conserved hypothetical protein YrhF; hypothetical protein 2551497 yrhF 5461650 yrhF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422022.1 2551129 R 326423 CDS YP_001422023.1 154686862 5461651 2551759..2554746 1 NC_009725.1 formate dehydrogenase YrhE; hypothetical protein 2554746 yrhE 5461651 yrhE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422023.1 2551759 D 326423 CDS YP_001422024.1 154686863 5461652 2554764..2555255 1 NC_009725.1 conserved hypothetical protein YrhD; hypothetical protein 2555255 yrhD 5461652 yrhD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422024.1 2554764 D 326423 CDS YP_001422025.1 154686864 5462149 complement(2555295..2555525) 1 NC_009725.1 hypothetical protein YrhC; hypothetical protein 2555525 yrhC 5462149 yrhC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422025.1 2555295 R 326423 CDS YP_001422026.1 154686865 5462150 complement(2555609..2556751) 1 NC_009725.1 catalyzes the formation of L-homocysteine from cystathionine; cystathionine beta-lyase 2556751 yrhB 5462150 yrhB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 cystathionine beta-lyase YP_001422026.1 2555609 R 326423 CDS YP_001422027.1 154686866 5462151 complement(2556753..2557670) 1 NC_009725.1 cysteine synthase YrhA; hypothetical protein 2557670 yrhA 5462151 yrhA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422027.1 2556753 R 326423 CDS YP_001422028.1 154686867 5462152 complement(2557724..2558419) 1 NC_009725.1 enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2558419 mtn 5462152 mtn Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase YP_001422028.1 2557724 R 326423 CDS YP_001422029.1 154686868 5462153 complement(2558440..2559081) 1 NC_009725.1 hypothetical protein YrrT; hypothetical protein 2559081 yrrT 5462153 yrrT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422029.1 2558440 R 326423 CDS YP_001422030.1 154686869 5462154 2559265..2559468 1 NC_009725.1 hypothetical protein YrzA; hypothetical protein 2559468 yrzA 5462154 yrzA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422030.1 2559265 D 326423 CDS YP_001422031.1 154686870 5462355 complement(2559508..2560224) 1 NC_009725.1 hypothetical protein YrrS; hypothetical protein 2560224 yrrS 5462355 yrrS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422031.1 2559508 R 326423 CDS YP_001422032.1 154686871 5462356 complement(2560288..2562042) 1 NC_009725.1 penicillin-binding protein YrrR; hypothetical protein 2562042 yrrR 5462356 yrrR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422032.1 2560288 R 326423 CDS YP_001422033.1 154686872 5462357 complement(2562096..2562569) 1 NC_009725.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 2562569 greA 5462357 greA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 transcription elongation factor GreA YP_001422033.1 2562096 R 326423 CDS YP_001422034.1 154686873 5462358 complement(2562823..2563458) 1 NC_009725.1 functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor; uridine kinase 2563458 udk 5462358 udk Bacillus amyloliquefaciens subsp. plantarum str. FZB42 uridine kinase YP_001422034.1 2562823 R 326423 CDS YP_001422035.1 154686874 5462359 complement(2563465..2564733) 1 NC_009725.1 protease YrrO; hypothetical protein 2564733 yrrO 5462359 yrrO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422035.1 2563465 R 326423 CDS YP_001422036.1 154686875 5462360 complement(2564751..2565680) 1 NC_009725.1 protease YrrN; hypothetical protein 2565680 yrrN 5462360 yrrN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422036.1 2564751 R 326423 CDS YP_001422037.1 154686876 5461305 complement(2565687..2566340) 1 NC_009725.1 caffeoyl-CoA O-methyltransferase YrrM; hypothetical protein 2566340 yrrM 5461305 yrrM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422037.1 2565687 R 326423 CDS YP_001422038.1 154686877 5461306 complement(2566492..2567583) 1 NC_009725.1 conserved hypothetical protein YrrL; hypothetical protein 2567583 yrrL 5461306 yrrL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422038.1 2566492 R 326423 CDS YP_001422039.1 154686878 5461307 complement(2567694..2567975) 1 NC_009725.1 conserved hypothetical protein YrzB; hypothetical protein 2567975 yrzB 5461307 yrzB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422039.1 2567694 R 326423 CDS YP_001422040.1 154686879 5461308 complement(2567988..2568404) 1 NC_009725.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 2568404 yrrK 5461308 yrrK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 Holliday junction resolvase-like protein YP_001422040.1 2567988 R 326423 CDS YP_001422041.1 154686880 5461309 complement(2568413..2568679) 1 NC_009725.1 conserved hypothetical protein YrzL; hypothetical protein 2568679 yrzL 5461309 yrzL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422041.1 2568413 R 326423 CDS YP_001422042.1 154686881 5461310 complement(2568764..2571400) 1 NC_009725.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 2571400 alaS 5461310 alaS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 alanyl-tRNA synthetase YP_001422042.1 2568764 R 326423 CDS YP_001422043.1 154686882 5463248 complement(2571732..2572793) 1 NC_009725.1 conserved hypothetical protein YrrI; hypothetical protein 2572793 yrrI 5463248 yrrI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422043.1 2571732 R 326423 CDS YP_001422044.1 154686883 5463249 2573014..2573742 1 NC_009725.1 glutamine ABC transporter (ATP-binding protein) GlnQ; hypothetical protein 2573742 glnQ 5463249 glnQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422044.1 2573014 D 326423 CDS YP_001422045.1 154686884 5463250 2573763..2574590 1 NC_009725.1 glutamine ABC transporter (glutamine-binding protein) GlnH; GlnH 2574590 glnH 5463250 glnH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GlnH YP_001422045.1 2573763 D 326423 CDS YP_001422046.1 154686885 5463251 2574647..2575297 1 NC_009725.1 glutamine ABC transporter (integral membrane protein) GlnM; GlnM 2575297 glnM 5463251 glnM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GlnM YP_001422046.1 2574647 D 326423 CDS YP_001422047.1 154686886 5463252 2575316..2575972 1 NC_009725.1 glutamine ABC transporter (integral membrane protein) GlnP; GlnP 2575972 glnP 5463252 glnP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GlnP YP_001422047.1 2575316 D 326423 CDS YP_001422048.1 154686887 5463253 complement(2576161..2576352) 1 NC_009725.1 hypothetical protein 2576352 5463253 RBAM_024570 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422048.1 2576161 R 326423 CDS YP_001422049.1 154686888 5460602 complement(2576365..2576883) 1 NC_009725.1 conserved hypothetical protein YrrD; hypothetical protein 2576883 yrrD 5460602 yrrD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422049.1 2576365 R 326423 CDS YP_001422050.1 154686889 5460603 complement(2576942..2579320) 1 NC_009725.1 conserved hypothetical protein YrrC; hypothetical protein 2579320 yrrC 5460603 yrrC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422050.1 2576942 R 326423 CDS YP_001422051.1 154686890 5460604 complement(2579339..2579989) 1 NC_009725.1 conserved hypothetical protein YrrB; hypothetical protein 2579989 yrrB 5460604 yrrB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422051.1 2579339 R 326423 CDS YP_001422052.1 154686891 5460605 complement(2580047..2581162) 1 NC_009725.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 2581162 mnmA 5460605 mnmA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 tRNA-specific 2-thiouridylase MnmA YP_001422052.1 2580047 R 326423 CDS YP_001422053.1 154686892 5460606 complement(2581199..2582338) 1 NC_009725.1 conserved hypothetical protein YrvO; hypothetical protein 2582338 yrvO 5460606 yrvO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422053.1 2581199 R 326423 CDS YP_001422054.1 154686893 5460607 complement(2582357..2582773) 1 NC_009725.1 conserved hypothetical protein YrzC; hypothetical protein 2582773 yrzC 5460607 yrzC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422054.1 2582357 R 326423 CDS YP_001422055.1 154686894 5462059 2582968..2584236 1 NC_009725.1 conserved hypothetical protein YrvN; recombination factor protein RarA 2584236 yrvN 5462059 yrvN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 recombination factor protein RarA YP_001422055.1 2582968 D 326423 CDS YP_001422056.1 154686895 5462060 complement(2584353..2585117) 1 NC_009725.1 conserved hypothetical protein YrvM; hypothetical protein 2585117 yrvM 5462060 yrvM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422056.1 2584353 R 326423 CDS YP_001422057.1 154686896 5462061 complement(2585443..2587221) 1 NC_009725.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 2587221 aspS 5462061 aspS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 aspartyl-tRNA synthetase YP_001422057.1 2585443 R 326423 CDS YP_001422058.1 154686897 5462062 complement(2587236..2588510) 1 NC_009725.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 2588510 hisS 5462062 hisS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 histidyl-tRNA synthetase YP_001422058.1 2587236 R 326423 CDS YP_001422059.1 154686898 5462063 complement(2588867..2589037) 1 NC_009725.1 hypothetical protein YrzK; hypothetical protein 2589037 yrzK 5462063 yrzK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422059.1 2588867 R 326423 CDS YP_001422060.1 154686899 5462064 2589168..2590730 1 NC_009725.1 N-acetylmuramoyl-L-alanine amidase YrvJ; hypothetical protein 2590730 yrvJ 5462064 yrvJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422060.1 2589168 D 326423 CDS YP_001422061.1 154686900 5460660 complement(2590757..2591200) 1 NC_009725.1 hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase 2591200 yrvI 5460660 yrvI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 D-tyrosyl-tRNA(Tyr) deacylase YP_001422061.1 2590757 R 326423 CDS YP_001422062.1 154686901 5460661 complement(2591213..2593417) 1 NC_009725.1 GTP pyrophosphokinase RelA; RelA 2593417 relA 5460661 relA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 RelA YP_001422062.1 2591213 R 326423 CDS YP_001422063.1 154686902 5460662 complement(2593575..2594087) 1 NC_009725.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 2594087 apt 5460662 apt Bacillus amyloliquefaciens subsp. plantarum str. FZB42 adenine phosphoribosyltransferase YP_001422063.1 2593575 R 326423 CDS YP_001422064.1 154686903 5460663 complement(2595067..2596452) 1 NC_009725.1 single-strand DNA-specific exonuclease YrvE; hypothetical protein 2596452 yrvE 5460663 yrvE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422064.1 2595067 R 326423 CDS YP_001422065.1 154686904 5460664 complement(2596508..2596834) 1 NC_009725.1 conserved hypothetical protein YrvD; hypothetical protein 2596834 yrvD 5460664 yrvD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422065.1 2596508 R 326423 CDS YP_001422066.1 154686905 5460665 complement(2596898..2597395) 1 NC_009725.1 conserved hypothetical protein YrvC; hypothetical protein 2597395 yrvC 5460665 yrvC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422066.1 2596898 R 326423 CDS YP_001422067.1 154686906 5460101 complement(2597527..2599746) 1 NC_009725.1 part of the preprotein secretory system; forms a complex with protein YajC; SecDFyajC stimulates the proton motive force-driven protein translocation, seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; bifunctional preprotein translocase subunit SecD/SecF 2599746 secDF 5460101 secDF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 bifunctional preprotein translocase subunit SecD/SecF YP_001422067.1 2597527 R 326423 CDS YP_001422068.1 154686907 5460102 complement(2599783..2600079) 1 NC_009725.1 hypothetical protein YrzD; hypothetical protein 2600079 yrzD 5460102 yrzD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422068.1 2599783 R 326423 CDS YP_001422069.1 154686908 5460103 2600195..2601751 1 NC_009725.1 stage V sporulation protein B (SpoVB); SpoVB 2601751 spoVB 5460103 spoVB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SpoVB YP_001422069.1 2600195 D 326423 CDS YP_001422070.1 154686909 5460104 complement(2601759..2602415) 1 NC_009725.1 conserved hypothetical protein YrbG; hypothetical protein 2602415 yrbG 5460104 yrbG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422070.1 2601759 R 326423 CDS YP_001422071.1 154686910 5460105 2602543..2602968 1 NC_009725.1 hypothetical protein YrzE; hypothetical protein 2602968 yrzE 5460105 yrzE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422071.1 2602543 D 326423 CDS YP_001422072.1 154686911 5460106 complement(2603020..2603280) 1 NC_009725.1 member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; preprotein translocase subunit YajC 2603280 yajC 5460106 yajC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 preprotein translocase subunit YajC YP_001422072.1 2603020 R 326423 CDS YP_001422073.1 154686912 5462891 complement(2603311..2604456) 1 NC_009725.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 2604456 tgt 5462891 tgt Bacillus amyloliquefaciens subsp. plantarum str. FZB42 queuine tRNA-ribosyltransferase YP_001422073.1 2603311 R 326423 CDS YP_001422074.1 154686913 5462892 complement(2604484..2605512) 1 NC_009725.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine:tRNA ribosyltransferase-isomerase 2605512 queA 5462892 queA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 S-adenosylmethionine:tRNA ribosyltransferase-isomerase YP_001422074.1 2604484 R 326423 CDS YP_001422075.1 154686914 5462893 complement(2605731..2606735) 1 NC_009725.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 2606735 ruvB 5462893 ruvB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 Holliday junction DNA helicase RuvB YP_001422075.1 2605731 R 326423 CDS YP_001422076.1 154686915 5462894 complement(2606746..2607351) 1 NC_009725.1 plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 2607351 ruvA 5462894 ruvA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 Holliday junction DNA helicase RuvA YP_001422076.1 2606746 R 326423 CDS YP_001422077.1 154686916 5462895 complement(2607486..2607995) 1 NC_009725.1 bypass-of-forespore protein C (BofC); BofC 2607995 bofC 5462895 bofC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 BofC YP_001422077.1 2607486 R 326423 CDS YP_001422078.1 154686917 5462896 complement(2608127..2608366) 1 NC_009725.1 hypothetical protein 2608366 5462896 RBAM_024870 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422078.1 2608127 R 326423 CDS YP_001422079.1 154686918 5462458 complement(2608380..2608895) 1 NC_009725.1 spore cortex protein CoxA; hypothetical protein 2608895 coxA 5462458 coxA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422079.1 2608380 R 326423 CDS YP_001422080.1 154686919 5462459 complement(2609121..2610341) 1 NC_009725.1 spoVID associated morphogenetic protein SafA; SafA 2610341 safA 5462459 safA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SafA YP_001422080.1 2609121 R 326423 CDS YP_001422081.1 154686920 5462460 complement(2610468..2611571) 1 NC_009725.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 2611571 nadA 5462460 nadA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 quinolinate synthetase YP_001422081.1 2610468 R 326423 CDS YP_001422082.1 154686921 5462461 complement(2611573..2612421) 1 NC_009725.1 catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide; nicotinate-nucleotide pyrophosphorylase 2612421 nadC 5462461 nadC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 nicotinate-nucleotide pyrophosphorylase YP_001422082.1 2611573 R 326423 CDS YP_001422083.1 154686922 5462462 complement(2612403..2613968) 1 NC_009725.1 catalyzes the formation of oxaloacetate from L-aspartate; L-aspartate oxidase 2613968 nadB 5462462 nadB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 L-aspartate oxidase YP_001422083.1 2612403 R 326423 CDS YP_001422084.1 154686923 5462463 2614074..2615225 1 NC_009725.1 catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis; cysteine desulfurase 2615225 nifS 5462463 nifS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 cysteine desulfurase YP_001422084.1 2614074 D 326423 CDS YP_001422085.1 154686924 5460204 2615222..2615764 1 NC_009725.1 conserved hypothetical protein YrxA; hypothetical protein 2615764 yrxA 5460204 yrxA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422085.1 2615222 D 326423 CDS YP_001422086.1 154686925 5460205 complement(2615791..2616648) 1 NC_009725.1 catalyzes the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis; prephenate dehydratase 2616648 pheA 5460205 pheA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 prephenate dehydratase YP_001422086.1 2615791 R 326423 CDS YP_001422087.1 154686926 5460206 complement(2616662..2617111) 1 NC_009725.1 chorismate mutase PheB; hypothetical protein 2617111 pheB 5460206 pheB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422087.1 2616662 R 326423 CDS YP_001422088.1 154686927 5460207 complement(2617159..2618445) 1 NC_009725.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 2618445 obgE 5460207 obgE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GTPase ObgE YP_001422088.1 2617159 R 326423 CDS YP_001422089.1 154686928 5460208 complement(2618477..2619055) 1 NC_009725.1 sporulation initiation phosphotransferase B (Spo0B); Spo0B 2619055 spo0B 5460208 spo0B Bacillus amyloliquefaciens subsp. plantarum str. FZB42 Spo0B YP_001422089.1 2618477 R 326423 CDS YP_001422090.1 154686929 5460209 complement(2619373..2619657) 1 NC_009725.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 2619657 rpmA 5460209 rpmA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 50S ribosomal protein L27 YP_001422090.1 2619373 R 326423 CDS YP_001422091.1 154686930 5461318 complement(2619670..2620011) 1 NC_009725.1 conserved hypothetical protein YsxB; hypothetical protein 2620011 ysxB 5461318 ysxB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422091.1 2619670 R 326423 CDS YP_001422092.1 154686931 5461319 complement(2620014..2620322) 1 NC_009725.1 50S ribosomal protein L21 (BL20) RplU; 50S ribosomal protein L21 2620322 rplU 5461319 rplU Bacillus amyloliquefaciens subsp. plantarum str. FZB42 50S ribosomal protein L21 YP_001422092.1 2620014 R 326423 CDS YP_001422093.1 154686932 5461320 complement(2620468..2621334) 1 NC_009725.1 stage IV sporulation protein FB (SpoIVFB); hypothetical protein 2621334 spoIVFB 5461320 spoIVFB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422093.1 2620468 R 326423 CDS YP_001422094.1 154686933 5461321 complement(2621327..2622130) 1 NC_009725.1 stage IV sporulation protein FA (SpoIVFA); SpoIVFA 2622130 spoIVFA 5461321 spoIVFA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SpoIVFA YP_001422094.1 2621327 R 326423 CDS YP_001422095.1 154686934 5461322 complement(2622258..2623067) 1 NC_009725.1 septum site-determining protein MinD; hypothetical protein 2623067 minD 5461322 minD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422095.1 2622258 R 326423 CDS YP_001422096.1 154686935 5461323 complement(2623064..2623744) 1 NC_009725.1 blocks the formation of polar Z-ring septums; septum formation inhibitor 2623744 minC 5461323 minC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 septum formation inhibitor YP_001422096.1 2623064 R 326423 CDS YP_001422097.1 154686936 5459504 complement(2623798..2624316) 1 NC_009725.1 rod shape-determining protein MreD; hypothetical protein 2624316 mreD 5459504 mreD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422097.1 2623798 R 326423 CDS YP_001422098.1 154686937 5459505 complement(2624313..2625176) 1 NC_009725.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 2625176 mreC 5459505 mreC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 rod shape-determining protein MreC YP_001422098.1 2624313 R 326423 CDS YP_001422099.1 154686938 5459506 complement(2625207..2626220) 1 NC_009725.1 functions in MreBCD complex in some organisms; rod shape-determining protein MreB 2626220 mreB 5459506 mreB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 rod shape-determining protein MreB YP_001422099.1 2625207 R 326423 CDS YP_001422100.1 154686939 5459507 complement(2626312..2627007) 1 NC_009725.1 Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC 2627007 radC 5459507 radC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DNA repair protein RadC YP_001422100.1 2626312 R 326423 CDS YP_001422101.1 154686940 5459508 complement(2627039..2627608) 1 NC_009725.1 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 2627608 maf 5459508 maf Bacillus amyloliquefaciens subsp. plantarum str. FZB42 Maf-like protein YP_001422101.1 2627039 R 326423 CDS YP_001422102.1 154686941 5459509 complement(2627749..2628750) 1 NC_009725.1 endospore development protein SpoIIB; SpoIIB 2628750 spoIIB 5459509 spoIIB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SpoIIB YP_001422102.1 2627749 R 326423 CDS YP_001422103.1 154686942 5462289 complement(2628877..2629629) 1 NC_009725.1 type 4 prepilin-like proteins leader peptide-processing enzyme ComC; hypothetical protein 2629629 comC 5462289 comC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422103.1 2628877 R 326423 CDS YP_001422104.1 154686943 5462290 complement(2629769..2631061) 1 NC_009725.1 folyl-polyglutamate synthetase FolC; hypothetical protein 2631061 folC 5462290 folC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422104.1 2629769 R 326423 CDS YP_001422105.1 154686944 5462291 complement(2631120..2633762) 1 NC_009725.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 2633762 valS 5462291 valS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 valyl-tRNA synthetase YP_001422105.1 2631120 R 326423 CDS YP_001422106.1 154686945 5462292 2634215..2634406 1 NC_009725.1 hypothetical protein 2634406 5462292 RBAM_025150 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422106.1 2634215 D 326423 CDS YP_001422107.1 154686946 5462293 complement(2634421..2635443) 1 NC_009725.1 hypothetical protein YsxE; hypothetical protein 2635443 ysxE 5462293 ysxE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422107.1 2634421 R 326423 CDS YP_001422108.1 154686947 5462294 complement(2635477..2637318) 1 NC_009725.1 spore coat assembly protein (SpoVID); SpoVID 2637318 spoVID 5462294 spoVID Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SpoVID YP_001422108.1 2635477 R 326423 CDS YP_001422109.1 154686948 5460782 complement(2637451..2638740) 1 NC_009725.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase 2638740 hemL 5460782 hemL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 glutamate-1-semialdehyde aminotransferase YP_001422109.1 2637451 R 326423 CDS YP_001422110.1 154686949 5460783 complement(2638769..2639746) 1 NC_009725.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 2639746 hemB 5460783 hemB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 delta-aminolevulinic acid dehydratase YP_001422110.1 2638769 R 326423 CDS YP_001422111.1 154686950 5460784 complement(2639749..2640528) 1 NC_009725.1 uroporphyrinogen III cosynthase HemD; hypothetical protein 2640528 hemD 5460784 hemD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422111.1 2639749 R 326423 CDS YP_001422112.1 154686951 5460785 complement(2640518..2641459) 1 NC_009725.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 2641459 hemC 5460785 hemC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 porphobilinogen deaminase YP_001422112.1 2640518 R 326423 CDS YP_001422113.1 154686952 5460786 complement(2641494..2642324) 1 NC_009725.1 membrane-bound protein HemX; HemX 2642324 hemX 5460786 hemX Bacillus amyloliquefaciens subsp. plantarum str. FZB42 HemX YP_001422113.1 2641494 R 326423 CDS YP_001422114.1 154686953 5460787 complement(2642332..2643708) 1 NC_009725.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 2643708 hemA 5460787 hemA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 glutamyl-tRNA reductase YP_001422114.1 2642332 R 326423 CDS YP_001422115.1 154686954 5463234 2643894..2644385 1 NC_009725.1 hypothetical protein YsxD; hypothetical protein 2644385 ysxD 5463234 ysxD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422115.1 2643894 D 326423 CDS YP_001422116.1 154686955 5463235 complement(2644418..2645005) 1 NC_009725.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 2645005 engB 5463235 engB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ribosome biogenesis GTP-binding protein YsxC YP_001422116.1 2644418 R 326423 CDS YP_001422117.1 154686956 5463236 complement(2645002..2647326) 1 NC_009725.1 ATP-dependent protease La 1 LonA; LonA 2647326 lonA 5463236 lonA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 LonA YP_001422117.1 2645002 R 326423 CDS YP_001422118.1 154686957 5463237 complement(2647526..2649184) 1 NC_009725.1 lon-like ATP-dependent protease LonB; hypothetical protein 2649184 lonB 5463237 lonB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422118.1 2647526 R 326423 CDS YP_001422119.1 154686958 5463238 complement(2649334..2650596) 1 NC_009725.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 2650596 clpX 5463238 clpX Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ATP-dependent protease ATP-binding subunit ClpX YP_001422119.1 2649334 R 326423 CDS YP_001422120.1 154686959 5463239 complement(2650868..2652142) 1 NC_009725.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 2652142 tig 5463239 tig Bacillus amyloliquefaciens subsp. plantarum str. FZB42 trigger factor YP_001422120.1 2650868 R 326423 CDS YP_001422121.1 154686960 5462131 complement(2652359..2653363) 1 NC_009725.1 conserved hypothetical protein YsoA; hypothetical protein 2653363 ysoA 5462131 ysoA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422121.1 2652359 R 326423 CDS YP_001422122.1 154686961 5462132 complement(2653481..2654080) 1 NC_009725.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit 2654080 leuD 5462132 leuD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 isopropylmalate isomerase small subunit YP_001422122.1 2653481 R 326423 CDS YP_001422123.1 154686962 5462133 complement(2654096..2655514) 1 NC_009725.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 2655514 leuC 5462133 leuC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 isopropylmalate isomerase large subunit YP_001422123.1 2654096 R 326423 CDS YP_001422124.1 154686963 5462134 complement(2655564..2656661) 1 NC_009725.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 2656661 leuB 5462134 leuB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 3-isopropylmalate dehydrogenase YP_001422124.1 2655564 R 326423 CDS YP_001422125.1 154686964 5462135 complement(2656682..2658238) 1 NC_009725.1 catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase 2658238 leuA 5462135 leuA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 2-isopropylmalate synthase YP_001422125.1 2656682 R 326423 CDS YP_001422126.1 154686965 5462136 complement(2658225..2659253) 1 NC_009725.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 2659253 ilvC 5462136 ilvC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ketol-acid reductoisomerase YP_001422126.1 2658225 R 326423 CDS YP_001422127.1 154686966 5459569 complement(2659276..2659794) 1 NC_009725.1 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit 2659794 ilvH 5459569 ilvH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 acetolactate synthase 3 regulatory subunit YP_001422127.1 2659276 R 326423 CDS YP_001422128.1 154686967 5459570 complement(2659791..2661584) 1 NC_009725.1 catalyzes the formation of 2-acetolactate from pyruvate; also known as acetolactate synthase large subunit; acetolactate synthase catalytic subunit 2661584 ilvB 5459570 ilvB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 acetolactate synthase catalytic subunit YP_001422128.1 2659791 R 326423 CDS YP_001422129.1 154686968 5459571 complement(2662307..2662531) 1 NC_009725.1 hypothetical protein 2662531 5459571 RBAM_025380 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422129.1 2662307 R 326423 CDS YP_001422130.1 154686969 5459572 complement(2662699..2662884) 1 NC_009725.1 hypothetical protein 2662884 5459572 RBAM_025390 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422130.1 2662699 R 326423 CDS YP_001422131.1 154686970 5461063 complement(2663520..2664029) 1 NC_009725.1 conserved hypothetical protein YsnB; hypothetical protein 2664029 ysnB 5461063 ysnB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422131.1 2663520 R 326423 CDS YP_001422132.1 154686971 5461064 complement(2664045..2664632) 1 NC_009725.1 hydrolyzes non-standard nucleotides such as xanthine and inosine; nucleoside-triphosphatase 2664632 ysnA 5461064 ysnA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 nucleoside-triphosphatase YP_001422132.1 2664045 R 326423 CDS YP_001422133.1 154686972 5461065 complement(2664653..2665390) 1 NC_009725.1 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH 2665390 rph 5461065 rph Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ribonuclease PH YP_001422133.1 2664653 R 326423 CDS YP_001422134.1 154686973 5461066 complement(2665500..2666585) 1 NC_009725.1 germination protein GerM; GerM 2666585 gerM 5461066 gerM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GerM YP_001422134.1 2665500 R 326423 CDS YP_001422135.1 154686974 5461586 complement(2666691..2667509) 1 NC_009725.1 converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase 2667509 racE 5461586 racE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 glutamate racemase YP_001422135.1 2666691 R 326423 CDS YP_001422136.1 154686975 5461587 complement(2667517..2667957) 1 NC_009725.1 conserved hypothetical protein YsmB; hypothetical protein 2667957 ysmB 5461587 ysmB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422136.1 2667517 R 326423 CDS YP_001422137.1 154686976 5461588 complement(2668144..2668368) 1 NC_009725.1 germination protein GerE; GerE 2668368 gerE 5461588 gerE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GerE YP_001422137.1 2668144 R 326423 CDS YP_001422138.1 154686977 5461589 complement(2668489..2668926) 1 NC_009725.1 conserved hypothetical protein YsmA; hypothetical protein 2668926 ysmA 5461589 ysmA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422138.1 2668489 R 326423 CDS YP_001422139.1 154686978 5461590 complement(2668986..2669744) 1 NC_009725.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit 2669744 sdhB 5461590 sdhB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 succinate dehydrogenase iron-sulfur subunit YP_001422139.1 2668986 R 326423 CDS YP_001422140.1 154686979 5461591 complement(2669747..2671507) 1 NC_009725.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 2671507 sdhA 5461591 sdhA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 succinate dehydrogenase flavoprotein subunit YP_001422140.1 2669747 R 326423 CDS YP_001422141.1 154686980 5460299 complement(2671541..2672149) 1 NC_009725.1 succinate dehydrogenase (cytochrome b-558 subunit) SdhC; hypothetical protein 2672149 sdhC 5460299 sdhC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422141.1 2671541 R 326423 CDS YP_001422142.1 154686981 5460300 2672446..2672892 1 NC_009725.1 hypothetical protein YslB; hypothetical protein 2672892 yslB 5460300 yslB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422142.1 2672446 D 326423 CDS YP_001422143.1 154686982 5460301 complement(2672939..2674168) 1 NC_009725.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase 2674168 lysC 5460301 lysC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 aspartate kinase YP_001422143.1 2672939 R 326423 CDS YP_001422144.1 154686983 5460302 complement(2674535..2676307) 1 NC_009725.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 2676307 uvrC 5460302 uvrC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 excinuclease ABC subunit C YP_001422144.1 2674535 R 326423 CDS YP_001422145.1 154686984 5460303 complement(2676451..2676765) 1 NC_009725.1 thioredoxin TrxA; hypothetical protein 2676765 trxA 5460303 trxA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422145.1 2676451 R 326423 CDS YP_001422146.1 154686985 5460304 complement(2676918..2678408) 1 NC_009725.1 alpha-N-arabinofuranosidase II Xsa; Xsa 2678408 xsa 5460304 xsa Bacillus amyloliquefaciens subsp. plantarum str. FZB42 Xsa YP_001422146.1 2676918 R 326423 CDS YP_001422147.1 154686986 5460311 complement(2678622..2679599) 1 NC_009725.1 electron transfer flavoprotein (alpha subunit) involved in calcium carbonate precipitation; EtfA 2679599 etfA 5460311 etfA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 EtfA YP_001422147.1 2678622 R 326423 CDS YP_001422148.1 154686987 5460312 complement(2679631..2680404) 1 NC_009725.1 electron transfer flavoprotein (beta subunit); EtfB 2680404 etfB 5460312 etfB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 EtfB YP_001422148.1 2679631 R 326423 CDS YP_001422149.1 154686988 5460313 complement(2680418..2681197) 1 NC_009725.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 2681197 ysiB 5460313 ysiB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 enoyl-CoA hydratase YP_001422149.1 2680418 R 326423 CDS YP_001422150.1 154686989 5460314 complement(2681211..2681801) 1 NC_009725.1 transcriptional regulator (TetR/AcrR family) YsiA; hypothetical protein 2681801 ysiA 5460314 ysiA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422150.1 2681211 R 326423 CDS YP_001422151.1 154686990 5460315 complement(2681884..2683572) 1 NC_009725.1 long chain acyl-CoA synthetase LcfA; LcfA 2683572 lcfA 5460315 lcfA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 LcfA YP_001422151.1 2681884 R 326423 CDS YP_001422152.1 154686991 5460316 2683678..2684352 1 NC_009725.1 hypothetical protein YwbB; hypothetical protein 2684352 ywbB 5460316 ywbB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422152.1 2683678 D 326423 CDS YP_001422153.1 154686992 5461040 complement(2684491..2684895) 1 NC_009725.1 conserved hypothetical protein YshE; hypothetical protein 2684895 yshE 5461040 yshE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422153.1 2684491 R 326423 CDS YP_001422154.1 154686993 5461041 complement(2684912..2687269) 1 NC_009725.1 MutS2; MutS-II; involved in blocking homologous and homeologous recombination; has ATPase activity stimulated by recombination intermediates; inhibits DNA strand exchange; recombination and DNA strand exchange inhibitor protein 2687269 mutSB 5461041 mutSB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 recombination and DNA strand exchange inhibitor protein YP_001422154.1 2684912 R 326423 CDS YP_001422155.1 154686994 5461042 complement(2687290..2689002) 1 NC_009725.1 DNA-dependent DNA polymerase beta chain YshC; hypothetical protein 2689002 yshC 5461042 yshC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422155.1 2687290 R 326423 CDS YP_001422156.1 154686995 5461043 complement(2689108..2689641) 1 NC_009725.1 hypothetical protein YshB; hypothetical protein 2689641 yshB 5461043 yshB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422156.1 2689108 R 326423 CDS YP_001422157.1 154686996 5461044 complement(2689649..2689906) 1 NC_009725.1 conserved hypothetical protein YshA; cell division protein ZapA 2689906 yshA 5461044 yshA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 cell division protein ZapA YP_001422157.1 2689649 R 326423 CDS YP_001422158.1 154686997 5461045 2690040..2690981 1 NC_009725.1 An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease HIII 2690981 rnhC 5461045 rnhC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ribonuclease HIII YP_001422158.1 2690040 D 326423 CDS YP_001422159.1 154686998 5463034 complement(2691018..2693432) 1 NC_009725.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 2693432 pheT 5463034 pheT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 phenylalanyl-tRNA synthetase subunit beta YP_001422159.1 2691018 R 326423 CDS YP_001422160.1 154686999 5463035 complement(2693446..2694483) 1 NC_009725.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 2694483 pheS 5463035 pheS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 phenylalanyl-tRNA synthetase subunit alpha YP_001422160.1 2693446 R 326423 CDS YP_001422161.1 154687000 5463036 complement(2694842..2695588) 1 NC_009725.1 conserved hypothetical protein YsgA; hypothetical protein 2695588 ysgA 5463036 ysgA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422161.1 2694842 R 326423 CDS YP_001422162.1 154687001 5463037 2695709..2695924 1 NC_009725.1 small acid-soluble spore protein SspI 2695924 sspI 5463037 sspI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 small acid-soluble spore protein SspI YP_001422162.1 2695709 D 326423 CDS YP_001422163.1 154687002 5463038 2695986..2697071 1 NC_009725.1 conserved hypothetical protein YsfB; hypothetical protein 2697071 ysfB 5463038 ysfB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422163.1 2695986 D 326423 CDS YP_001422164.1 154687003 5463039 2697171..2698583 1 NC_009725.1 glycolate oxidase subunit YsfC; hypothetical protein 2698583 ysfC 5463039 ysfC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422164.1 2697171 D 326423 CDS YP_001422165.1 154687004 5461641 2698580..2699908 1 NC_009725.1 glycolate oxidase subunit YsfD; hypothetical protein 2699908 ysfD 5461641 ysfD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422165.1 2698580 D 326423 CDS YP_001422166.1 154687005 5461642 complement(2699979..2701775) 1 NC_009725.1 carbon starvation protein CstA; hypothetical protein 2701775 cstA 5461642 cstA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422166.1 2699979 R 326423 CDS YP_001422167.1 154687006 5461643 complement(2701886..2703385) 1 NC_009725.1 alpha-L-arabinofuranosidase I AbfA; AbfA 2703385 abfA 5461643 abfA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 AbfA YP_001422167.1 2701886 R 326423 CDS YP_001422168.1 154687007 5461644 complement(2703404..2704246) 1 NC_009725.1 L-arabinose transport system permease protein AraQ; AraQ 2704246 araQ 5461644 araQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 AraQ YP_001422168.1 2703404 R 326423 CDS YP_001422169.1 154687008 5461645 complement(2704250..2705191) 1 NC_009725.1 L-arabinose transport system permease protein AraP; AraP 2705191 araP 5461645 araP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 AraP YP_001422169.1 2704250 R 326423 CDS YP_001422170.1 154687009 5461646 complement(2705233..2706528) 1 NC_009725.1 probable arabinose-binding protein precursor AraN; AraN 2706528 araN 5461646 araN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 AraN YP_001422170.1 2705233 R 326423 CDS YP_001422171.1 154687010 5462378 complement(2706560..2707744) 1 NC_009725.1 arabinose operon protein M (AraM); AraM 2707744 araM 5462378 araM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 AraM YP_001422171.1 2706560 R 326423 CDS YP_001422172.1 154687011 5462379 complement(2707741..2708538) 1 NC_009725.1 arabinose operon protein L (AraL); AraL 2708538 araL 5462379 araL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 AraL YP_001422172.1 2707741 R 326423 CDS YP_001422173.1 154687012 5462380 complement(2708525..2709214) 1 NC_009725.1 catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source; L-ribulose-5-phosphate 4-epimerase 2709214 araD 5462380 araD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 L-ribulose-5-phosphate 4-epimerase YP_001422173.1 2708525 R 326423 CDS YP_001422174.1 154687013 5462381 complement(2709207..2710892) 1 NC_009725.1 catalyzes the phosphorylation of ribulose to ribulose 5-phosphate; ribulokinase 2710892 araB 5462381 araB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ribulokinase YP_001422174.1 2709207 R 326423 CDS YP_001422175.1 154687014 5462382 complement(2710894..2712393) 1 NC_009725.1 catalyzes the formation of L-ribulose from L-arabinose in L-arabinose catabolism; L-arabinose isomerase 2712393 araA 5462382 araA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 L-arabinose isomerase YP_001422175.1 2710894 R 326423 CDS YP_001422176.1 154687015 5462383 complement(2712571..2713536) 1 NC_009725.1 arabinan-endo 1,5-alpha-L-arabinase AbnA; AbnA 2713536 abnA 5462383 abnA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 AbnA YP_001422176.1 2712571 R 326423 CDS YP_001422177.1 154687016 5459809 complement(2713678..2714763) 1 NC_009725.1 COG1363; endo-1,4-beta-glucanase; hypothetical protein 2714763 ysdC 5459809 ysdC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422177.1 2713678 R 326423 CDS YP_001422178.1 154687017 5459810 2714947..2715339 1 NC_009725.1 hypothetical protein YsdB; hypothetical protein 2715339 ysdB 5459810 ysdB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422178.1 2714947 D 326423 CDS YP_001422179.1 154687018 5459811 complement(2715353..2715619) 1 NC_009725.1 conserved hypothetical protein YsdA; hypothetical protein 2715619 ysdA 5459811 ysdA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422179.1 2715353 R 326423 CDS YP_001422180.1 154687019 5459812 complement(2715677..2716036) 1 NC_009725.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 2716036 rplT 5459812 rplT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 50S ribosomal protein L20 YP_001422180.1 2715677 R 326423 CDS YP_001422181.1 154687020 5459813 complement(2716068..2716268) 1 NC_009725.1 50S ribosomal protein L35 RpmI; 50S ribosomal protein L35 2716268 rpmI 5459813 rpmI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 50S ribosomal protein L35 YP_001422181.1 2716068 R 326423 CDS YP_001422182.1 154687021 5459814 complement(2716281..2716784) 1 NC_009725.1 IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 2716784 infC 5459814 infC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 translation initiation factor IF-3 YP_001422182.1 2716281 R 326423 CDS YP_001422183.1 154687022 5460666 complement(2717174..2717857) 1 NC_009725.1 in conjunction with LrgA this protein inhibits the expression or activity of extracellular murein hydrolases; antiholin-like protein LrgB 2717857 ysbB 5460666 ysbB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 antiholin-like protein LrgB YP_001422183.1 2717174 R 326423 CDS YP_001422184.1 154687023 5460667 complement(2717870..2718307) 1 NC_009725.1 negatively regulates murein hydrolase activity; murein hydrolase regulator LrgA 2718307 ysbA 5460667 ysbA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 murein hydrolase regulator LrgA YP_001422184.1 2717870 R 326423 CDS YP_001422185.1 154687024 5460668 complement(2718437..2719171) 1 NC_009725.1 two-component response regulator; COG3279, RR of the LytR/AlgR family, two component signal transduction system controlling rate of autolysis; hypothetical protein 2719171 lytT 5460668 lytT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422185.1 2718437 R 326423 CDS YP_001422186.1 154687025 5460669 complement(2719149..2720930) 1 NC_009725.1 sensor histidine kinase controlling autolysis; transcription control of biofilm formation; hypothetical protein 2720930 lytS 5460669 lytS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422186.1 2719149 R 326423 CDS YP_001422187.1 154687026 5460670 2721117..2721911 1 NC_009725.1 conserved hypothetical protein YsaA; hypothetical protein 2721911 ysaA 5460670 ysaA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422187.1 2721117 D 326423 CDS YP_001422188.1 154687027 5460671 complement(2721966..2723897) 1 NC_009725.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 2723897 thrS 5460671 thrS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 threonyl-tRNA synthetase YP_001422188.1 2721966 R 326423 CDS YP_001422189.1 154687028 5460020 complement(2724307..2725137) 1 NC_009725.1 hypothetical protein YtxC; hypothetical protein 2725137 ytxC 5460020 ytxC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422189.1 2724307 R 326423 CDS YP_001422190.1 154687029 5460021 complement(2725203..2725844) 1 NC_009725.1 conserved hypothetical protein YtxB; hypothetical protein 2725844 ytxB 5460021 ytxB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422190.1 2725203 R 326423 CDS YP_001422191.1 154687030 5460022 complement(2725876..2726811) 1 NC_009725.1 Primosomal protein that may act to load helicase DnaC during DNA replication; primosomal protein DnaI 2726811 dnaI 5460022 dnaI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 primosomal protein DnaI YP_001422191.1 2725876 R 326423 CDS YP_001422192.1 154687031 5460023 complement(2726836..2728245) 1 NC_009725.1 replication initiation and membrane attachment protein DnaB; hypothetical protein 2728245 dnaB 5460023 dnaB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422192.1 2726836 R 326423 CDS YP_001422193.1 154687032 5460024 complement(2728357..2728815) 1 NC_009725.1 conserved hypothetical protein YtcG; transcriptional regulator NrdR 2728815 nrdR 5460024 nrdR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 transcriptional regulator NrdR YP_001422193.1 2728357 R 326423 CDS YP_001422194.1 154687033 5460025 complement(2729064..2729450) 1 NC_009725.1 Decarboxylation of S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine; S-adenosylmethionine decarboxylase proenzyme 2729450 speD 5460025 speD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 S-adenosylmethionine decarboxylase proenzyme YP_001422194.1 2729064 R 326423 CDS YP_001422195.1 154687034 5459905 complement(2729683..2730705) 1 NC_009725.1 NADP-dependent; catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; active during gluconeogenesis; glyceraldehyde-3-phosphate dehydrogenase 2730705 gapB 5459905 gapB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 glyceraldehyde-3-phosphate dehydrogenase YP_001422195.1 2729683 R 326423 CDS YP_001422196.1 154687035 5459906 complement(2730914..2731300) 1 NC_009725.1 conserved hypothetical protein YtcD; hypothetical protein 2731300 ytcD 5459906 ytcD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422196.1 2730914 R 326423 CDS YP_001422197.1 154687036 5459907 2731484..2732683 1 NC_009725.1 arabinose efflux permease YtbD; hypothetical protein 2732683 ytbD 5459907 ytbD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422197.1 2731484 D 326423 CDS YP_001422198.1 154687037 5459908 2732742..2733584 1 NC_009725.1 plant metabolite dehydrogenase YtbE; hypothetical protein 2733584 ytbE 5459908 ytbE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422198.1 2732742 D 326423 CDS YP_001422199.1 154687038 5459909 complement(2733623..2734216) 1 NC_009725.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 2734216 coaE 5459909 coaE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 dephospho-CoA kinase YP_001422199.1 2733623 R 326423 CDS YP_001422200.1 154687039 5459910 complement(2734232..2734849) 1 NC_009725.1 conserved hypothetical protein YtaF; hypothetical protein 2734849 ytaF 5459910 ytaF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422200.1 2734232 R 326423 CDS YP_001422201.1 154687040 5463299 complement(2735001..2735837) 1 NC_009725.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 2735837 mutM 5463299 mutM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 formamidopyrimidine-DNA glycosylase YP_001422201.1 2735001 R 326423 CDS YP_001422202.1 154687041 5463300 complement(2735856..2738495) 1 NC_009725.1 has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I 2738495 polA 5463300 polA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DNA polymerase I YP_001422202.1 2735856 R 326423 CDS YP_001422203.1 154687042 5463301 complement(2738742..2740481) 1 NC_009725.1 sensor protein histidine kinase; COG5002, VicK; HK involved in global regulation of the pho regulon; PhoR 2740481 phoR 5463301 phoR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 PhoR YP_001422203.1 2738742 R 326423 CDS YP_001422204.1 154687043 5463302 complement(2740474..2741193) 1 NC_009725.1 two-component response regulator; COG0745, OmpR like RR consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; global regulation of the pho regulon; PhoP 2741193 phoP 5463302 phoP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 PhoP YP_001422204.1 2740474 R 326423 CDS YP_001422205.1 154687044 5463303 complement(2741409..2742347) 1 NC_009725.1 Catalyzes the reversible oxidation of malate to oxaloacetate; malate dehydrogenase 2742347 mdh 5463303 mdh Bacillus amyloliquefaciens subsp. plantarum str. FZB42 malate dehydrogenase YP_001422205.1 2741409 R 326423 CDS YP_001422206.1 154687045 5463304 complement(2742393..2743664) 1 NC_009725.1 Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase 2743664 icd 5463304 icd Bacillus amyloliquefaciens subsp. plantarum str. FZB42 isocitrate dehydrogenase YP_001422206.1 2742393 R 326423 CDS YP_001422207.1 154687046 5460986 complement(2743825..2744943) 1 NC_009725.1 catalyzes the formation of citrate from acetyl-CoA and oxaloacetate; citrate synthase 2744943 citZ 5460986 citZ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 citrate synthase YP_001422207.1 2743825 R 326423 CDS YP_001422208.1 154687047 5460987 complement(2745688..2746098) 1 NC_009725.1 hypothetical protein YjdF; hypothetical protein 2746098 yjdF 5460987 yjdF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422208.1 2745688 R 326423 CDS YP_001422209.1 154687048 5460988 complement(2746518..2746982) 1 NC_009725.1 conserved hypothetical protein YtwI; hypothetical protein 2746982 ytwI 5460988 ytwI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422209.1 2746518 R 326423 CDS YP_001422210.1 154687049 5460989 2747079..2748194 1 NC_009725.1 conserved hypothetical protein YtvI; hypothetical protein 2748194 ytvI 5460989 ytvI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422210.1 2747079 D 326423 CDS YP_001422211.1 154687050 5460990 complement(2748226..2748609) 1 NC_009725.1 F exclusion of bacteriophage T7; overproduction of this protein in Escherichia coli inhibits the F plasmid-mediated exclusion of bacteriophage T7; interacts with the F plasmid-encoded PifA protein; inner membrane protein; FxsA 2748609 fxsA 5460990 fxsA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 FxsA YP_001422211.1 2748226 R 326423 CDS YP_001422212.1 154687051 5460991 complement(2748720..2750477) 1 NC_009725.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 2750477 pyk 5460991 pyk Bacillus amyloliquefaciens subsp. plantarum str. FZB42 pyruvate kinase YP_001422212.1 2748720 R 326423 CDS YP_001422213.1 154687052 5460684 complement(2750517..2751476) 1 NC_009725.1 catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis; 6-phosphofructokinase 2751476 pfkA 5460684 pfkA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 6-phosphofructokinase YP_001422213.1 2750517 R 326423 CDS YP_001422214.1 154687053 5460685 complement(2751668..2752645) 1 NC_009725.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha 2752645 accA 5460685 accA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 acetyl-CoA carboxylase carboxyltransferase subunit alpha YP_001422214.1 2751668 R 326423 CDS YP_001422215.1 154687054 5460686 complement(2752630..2753502) 1 NC_009725.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta 2753502 accD 5460686 accD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 acetyl-CoA carboxylase subunit beta YP_001422215.1 2752630 R 326423 CDS YP_001422216.1 154687055 5460687 complement(2753831..2755063) 1 NC_009725.1 NAD-dependent malic enzyme IV YtsJ; hypothetical protein 2755063 ytsJ 5460687 ytsJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422216.1 2753831 R 326423 CDS YP_001422217.1 154687056 5460688 complement(2755203..2758550) 1 NC_009725.1 catalyzes DNA-template-directed extension of the 3'-end of a DNA strand by one nucleotide at a time. Proposed to be responsible for the synthesis of the lagging strand. In the low GC gram positive bacteria this enzyme is less processive and more error prone than its counterpart in other bacteria.; DNA polymerase III DnaE 2758550 dnaE 5460688 dnaE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DNA polymerase III DnaE YP_001422217.1 2755203 R 326423 CDS YP_001422218.1 154687057 5460689 2758684..2759025 1 NC_009725.1 hypothetical protein 2759025 5460689 RBAM_026290 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422218.1 2758684 D 326423 CDS YP_001422219.1 154687058 5462700 2759022..2759525 1 NC_009725.1 hypothetical protein YtrI; hypothetical protein 2759525 ytrI 5462700 ytrI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422219.1 2759022 D 326423 CDS YP_001422220.1 154687059 5462701 complement(2759840..2760781) 1 NC_009725.1 conserved hypothetical protein YtqI; hypothetical protein 2760781 ytqI 5462701 ytqI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422220.1 2759840 R 326423 CDS YP_001422221.1 154687060 5462702 2760898..2761200 1 NC_009725.1 hypothetical protein YtpI; hypothetical protein 2761200 ytpI 5462702 ytpI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422221.1 2760898 D 326423 CDS YP_001422222.1 154687061 5462703 complement(2761229..2762545) 1 NC_009725.1 conserved hypothetical protein YtoI; hypothetical protein 2762545 ytoI 5462703 ytoI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422222.1 2761229 R 326423 CDS YP_001422223.1 154687062 5462704 complement(2762684..2763370) 1 NC_009725.1 catalyzes the opening and hydrolysis of the beta-lactam ring of beta-lactam antibiotics such as penicillins and cephalosporins; metal-dependent hydrolase 2763370 ytkL 5462704 ytkL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 metal-dependent hydrolase YP_001422223.1 2762684 R 326423 CDS YP_001422224.1 154687063 5462705 complement(2763431..2764198) 1 NC_009725.1 catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 2764198 fabG 5462705 fabG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 3-ketoacyl-ACP reductase YP_001422224.1 2763431 R 326423 CDS YP_001422225.1 154687064 5461720 complement(2764336..2764464) 1 NC_009725.1 hypothetical protein YtzD; hypothetical protein 2764464 ytzD 5461720 ytzD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422225.1 2764336 R 326423 CDS YP_001422226.1 154687065 5461721 complement(2764538..2765914) 1 NC_009725.1 catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 2765914 argH 5461721 argH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 argininosuccinate lyase YP_001422226.1 2764538 R 326423 CDS YP_001422227.1 154687066 5461722 complement(2765911..2767122) 1 NC_009725.1 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 2767122 argG 5461722 argG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 argininosuccinate synthase YP_001422227.1 2765911 R 326423 CDS YP_001422228.1 154687067 5461723 complement(2767275..2767787) 1 NC_009725.1 molybdopterin precursor biosynthesis protein B (MoaB); hypothetical protein 2767787 moaB 5461723 moaB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422228.1 2767275 R 326423 CDS YP_001422229.1 154687068 5461724 complement(2767887..2769074) 1 NC_009725.1 AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase 2769074 ackA 5461724 ackA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 acetate kinase YP_001422229.1 2767887 R 326423 CDS YP_001422230.1 154687069 5461725 complement(2769385..2770371) 1 NC_009725.1 conserved hypothetical protein YtxK; hypothetical protein 2770371 ytxK 5461725 ytxK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422230.1 2769385 R 326423 CDS YP_001422231.1 154687070 5462928 complement(2770433..2770936) 1 NC_009725.1 antioxidant activity; thioredoxin-dependent thiol peroxidase; forms homodimers in solution; shows substrate specificity to alkyl hydroperoxides; periplasmic protein; thiol peroxidase 2770936 tpx 5462928 tpx Bacillus amyloliquefaciens subsp. plantarum str. FZB42 thiol peroxidase YP_001422231.1 2770433 R 326423 CDS YP_001422232.1 154687071 5462929 complement(2771052..2771492) 1 NC_009725.1 conserved hypothetical protein YtfJ; hypothetical protein 2771492 ytfJ 5462929 ytfJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422232.1 2771052 R 326423 CDS YP_001422233.1 154687072 5462930 complement(2771505..2772194) 1 NC_009725.1 hypothetical protein YtfI; hypothetical protein 2772194 ytfI 5462930 ytfI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422233.1 2771505 R 326423 CDS YP_001422234.1 154687073 5462931 complement(2772272..2772763) 1 NC_009725.1 conserved hypothetical protein YteJ; hypothetical protein 2772763 yteJ 5462931 yteJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422234.1 2772272 R 326423 CDS YP_001422235.1 154687074 5462932 complement(2772777..2773784) 1 NC_009725.1 signal peptide peptidase SppA; hypothetical protein 2773784 sppA 5462932 sppA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422235.1 2772777 R 326423 CDS YP_001422236.1 154687075 5462933 2773942..2774772 1 NC_009725.1 catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase 2774772 ppnK 5462933 ppnK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 inorganic polyphosphate/ATP-NAD kinase YP_001422236.1 2773942 D 326423 CDS YP_001422237.1 154687076 5461333 complement(2774789..2776384) 1 NC_009725.1 conserved hypothetical protein YtcJ; hypothetical protein 2776384 ytcJ 5461333 ytcJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422237.1 2774789 R 326423 CDS YP_001422238.1 154687077 5461334 complement(2776408..2777994) 1 NC_009725.1 conserved hypothetical protein YtcI; hypothetical protein 2777994 ytcI 5461334 ytcI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422238.1 2776408 R 326423 CDS YP_001422239.1 154687078 5461335 complement(2778143..2778364) 1 NC_009725.1 small acid-soluble spore protein SspA; hypothetical protein 2778364 sspA 5461335 sspA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422239.1 2778143 R 326423 CDS YP_001422240.1 154687079 5461336 complement(2778445..2779650) 1 NC_009725.1 Required for the synthesis of the thiazole moiety; thiamine biosynthesis protein ThiI 2779650 thiI 5461336 thiI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 thiamine biosynthesis protein ThiI YP_001422240.1 2778445 R 326423 CDS YP_001422241.1 154687080 5461337 complement(2779654..2780799) 1 NC_009725.1 nifS protein homolog NifZ; NifZ 2780799 nifZ 5461337 nifZ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 NifZ YP_001422241.1 2779654 R 326423 CDS YP_001422242.1 154687081 5461338 2780993..2782333 1 NC_009725.1 branched-chain amino acid transport system carrier protein BraB; BraB 2782333 braB 5461338 braB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 BraB YP_001422242.1 2780993 D 326423 CDS YP_001422243.1 154687082 5463056 complement(2782447..2784138) 1 NC_009725.1 acts to negatively regulates ftsZ ring formation by modulating the frequency and position of the ftsZ ring formation; septation ring formation regulator EzrA 2784138 ezrA 5463056 ezrA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 septation ring formation regulator EzrA YP_001422243.1 2782447 R 326423 CDS YP_001422244.1 154687083 5463057 2784334..2785146 1 NC_009725.1 catalyzes the formation of L-histidinol from L-histidinol phosphate; histidinol-phosphatase 2785146 hisJ 5463057 hisJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 histidinol-phosphatase YP_001422244.1 2784334 D 326423 CDS YP_001422245.1 154687084 5463058 complement(2785136..2785759) 1 NC_009725.1 HTH-type transcription regulator (Stress response protein) YttP; hypothetical protein 2785759 yttP 5463058 yttP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422245.1 2785136 R 326423 CDS YP_001422246.1 154687085 5463059 2785885..2786367 1 NC_009725.1 conserved hypothetical protein YtsP; hypothetical protein 2786367 ytsP 5463059 ytsP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422246.1 2785885 D 326423 CDS YP_001422247.1 154687086 5463060 complement(2786402..2788150) 1 NC_009725.1 conserved hypothetical protein YtrP; hypothetical protein 2788150 ytrP 5463060 ytrP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422247.1 2786402 R 326423 CDS YP_001422248.1 154687087 5463061 2788441..2789043 1 NC_009725.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 2789043 rpsD 5463061 rpsD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 30S ribosomal protein S4 YP_001422248.1 2788441 D 326423 CDS YP_001422249.1 154687088 5460654 2789299..2790669 1 NC_009725.1 aldehyde dehydrogenase YwdH; hypothetical protein 2790669 ywdH 5460654 ywdH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422249.1 2789299 D 326423 CDS YP_001422250.1 154687089 5460655 complement(2790806..2791363) 1 NC_009725.1 hypothetical protein [bacteriophage SPBc2] YokH; hypothetical protein 2791363 yokH 5460655 yokH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422250.1 2790806 R 326423 CDS YP_001422251.1 154687090 5460656 complement(2791859..2792023) 1 NC_009725.1 N-terminus; phage-related Zn finger domain-containing protein 2792023 5460656 RBAM_026620 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 phage-related Zn finger domain-containing protein YP_001422251.1 2791859 R 326423 CDS YP_001422252.1 154687091 5460657 complement(2792410..2793174) 1 NC_009725.1 hypothetical protein 2793174 5460657 RBAM_026630 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422252.1 2792410 R 326423 CDS YP_001422253.1 154687092 5460658 complement(2793282..2794067) 1 NC_009725.1 hypothetical protein 2794067 5460658 RBAM_026640 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422253.1 2793282 R 326423 CDS YP_001422254.1 154687093 5460659 2794434..2794658 1 NC_009725.1 hypothetical protein 2794658 5460659 RBAM_026650 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422254.1 2794434 D 326423 CDS YP_001422255.1 154687094 5460444 complement(2794650..2795165) 1 NC_009725.1 Positive regulatory protein that acts at the late promoter PL; positive control sigma-like factor 2795165 5460444 RBAM_026660 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 positive control sigma-like factor YP_001422255.1 2794650 R 326423 CDS YP_001422256.1 154687095 5460445 complement(2795387..2795815) 1 NC_009725.1 hypothetical protein 2795815 5460445 RBAM_026670 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422256.1 2795387 R 326423 CDS YP_001422257.1 154687096 5460446 complement(2795906..2796106) 1 NC_009725.1 hypothetical protein 2796106 5460446 RBAM_026680 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422257.1 2795906 R 326423 CDS YP_001422258.1 154687097 5460447 complement(2796207..2796434) 1 NC_009725.1 hypothetical protein 2796434 5460447 RBAM_026690 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422258.1 2796207 R 326423 CDS YP_001422259.1 154687098 5460448 complement(2796403..2796621) 1 NC_009725.1 C-terminus; replicative DNA helicase dnaC 2796621 5460448 RBAM_026700 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 replicative DNA helicase dnaC YP_001422259.1 2796403 R 326423 CDS YP_001422260.1 154687099 5460449 complement(2796779..2797969) 1 NC_009725.1 flavohemoprotein; catalyzes the formation of nitrate from nitric oxide; can also catalyze the reduction of dihydropteridine; nitric oxide dioxygenase 2797969 hmp 5460449 hmp Bacillus amyloliquefaciens subsp. plantarum str. FZB42 nitric oxide dioxygenase YP_001422260.1 2796779 R 326423 CDS YP_001422261.1 154687100 5460497 2798604..2799113 1 NC_009725.1 conserved hypothetical protein YraA; hypothetical protein 2799113 yraA 5460497 yraA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422261.1 2798604 D 326423 CDS YP_001422262.1 154687101 5460498 complement(2799406..2800158) 1 NC_009725.1 C-terminus; phi ETA orf 55-like protein 2800158 5460498 RBAM_026730 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 phi ETA orf 55-like protein YP_001422262.1 2799406 R 326423 CDS YP_001422263.1 154687102 5460499 2800276..2800623 1 NC_009725.1 hypothetical protein 2800623 5460499 RBAM_026740 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422263.1 2800276 D 326423 CDS YP_001422264.1 154687103 5460500 complement(2800867..2801736) 1 NC_009725.1 hypothetical protein 2801736 5460500 RBAM_026750 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422264.1 2800867 R 326423 CDS YP_001422265.1 154687104 5460501 2801959..2802765 1 NC_009725.1 transcriptional regulator 2802765 5460501 RBAM_026760 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 transcriptional regulator YP_001422265.1 2801959 D 326423 CDS YP_001422266.1 154687105 5460502 2802838..2803569 1 NC_009725.1 amino acid permease 2803569 5460502 RBAM_026770 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 amino acid permease YP_001422266.1 2802838 D 326423 CDS YP_001422267.1 154687106 5460228 2803566..2803889 1 NC_009725.1 hypothetical protein 2803889 5460228 RBAM_026780 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422267.1 2803566 D 326423 CDS YP_001422268.1 154687107 5460229 complement(2804175..2805440) 1 NC_009725.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 2805440 tyrS 5460229 tyrS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 tyrosyl-tRNA synthetase YP_001422268.1 2804175 R 326423 CDS YP_001422269.1 154687108 5460230 complement(2805777..2807495) 1 NC_009725.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase 2807495 acsA 5460230 acsA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 acetyl-CoA synthetase YP_001422269.1 2805777 R 326423 CDS YP_001422270.1 154687109 5460231 2807654..2808286 1 NC_009725.1 acetoin utilization protein AcuA; AcuA 2808286 acuA 5460231 acuA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 AcuA YP_001422270.1 2807654 D 326423 CDS YP_001422271.1 154687110 5460232 2808311..2808955 1 NC_009725.1 acetoin dehydrogenase AcuB; AcuB 2808955 acuB 5460232 acuB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 AcuB YP_001422271.1 2808311 D 326423 CDS YP_001422272.1 154687111 5460233 2808952..2810118 1 NC_009725.1 acetoin dehydrogenase AcuC; hypothetical protein 2810118 acuC 5460233 acuC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422272.1 2808952 D 326423 CDS YP_001422273.1 154687112 5461352 complement(2810128..2810817) 1 NC_009725.1 Homolog of MotB, appears to be involved in motility on surfaces or under specific ionic conditions. With MotP (a Mot A homolog) forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine.; flagellar motor protein MotS 2810817 ytxE 5461352 ytxE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 flagellar motor protein MotS YP_001422273.1 2810128 R 326423 CDS YP_001422274.1 154687113 5461353 complement(2810807..2811622) 1 NC_009725.1 Homolog of MotA, appears to be involved in motility on surfaces and under different ionic conditions. With MotS (a MotB homolog) forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine.; flagellar motor protein MotP 2811622 ytxD 5461353 ytxD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 flagellar motor protein MotP YP_001422274.1 2810807 R 326423 CDS YP_001422275.1 154687114 5461354 complement(2811691..2812695) 1 NC_009725.1 catabolite control protein A (glucose-resistanceamylase regulator) CcpA; hypothetical protein 2812695 ccpA 5461354 ccpA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422275.1 2811691 R 326423 CDS YP_001422276.1 154687115 5461355 complement(2812974..2814050) 1 NC_009725.1 catalyzes the formation of 3-deoxy-D-aribino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate and the formation of prephenate from chorismate; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase 2814050 aroA 5461355 aroA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase YP_001422276.1 2812974 R 326423 CDS YP_001422277.1 154687116 5461356 complement(2814359..2814613) 1 NC_009725.1 conserved hypothetical protein YtxJ; hypothetical protein 2814613 ytxJ 5461356 ytxJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422277.1 2814359 R 326423 CDS YP_001422278.1 154687117 5461357 complement(2814639..2815052) 1 NC_009725.1 general stress protein YtxH; hypothetical protein 2815052 ytxH 5461357 ytxH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422278.1 2814639 R 326423 CDS YP_001422279.1 154687118 5459601 complement(2815085..2815507) 1 NC_009725.1 general stress protein YtxG; hypothetical protein 2815507 ytxG 5459601 ytxG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422279.1 2815085 R 326423 CDS YP_001422280.1 154687119 5459602 complement(2815663..2816961) 1 NC_009725.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 2816961 murC 5459602 murC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 UDP-N-acetylmuramate--L-alanine ligase YP_001422280.1 2815663 R 326423 CDS YP_001422281.1 154687120 5459603 complement(2817202..2819805) 1 NC_009725.1 DNA translocase stage III sporulation protein YtpT; hypothetical protein 2819805 ytpT 5459603 ytpT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422281.1 2817202 R 326423 CDS YP_001422282.1 154687121 5459604 complement(2819973..2820578) 1 NC_009725.1 phenylalanyl-tRNA synthetase (beta subunit) YtpR; hypothetical protein 2820578 ytpR 5459604 ytpR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422282.1 2819973 R 326423 CDS YP_001422283.1 154687122 5459605 complement(2820593..2821402) 1 NC_009725.1 conserved hypothetical protein YtpQ; hypothetical protein 2821402 ytpQ 5459605 ytpQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422283.1 2820593 R 326423 CDS YP_001422284.1 154687123 5459606 complement(2821418..2821741) 1 NC_009725.1 thioredoxin YtpP; hypothetical protein 2821741 ytpP 5459606 ytpP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422284.1 2821418 R 326423 CDS YP_001422285.1 154687124 5462305 2821939..2822385 1 NC_009725.1 conserved hypothetical protein YtoQ; hypothetical protein 2822385 ytoQ 5462305 ytoQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422285.1 2821939 D 326423 CDS YP_001422286.1 154687125 5462306 complement(2822419..2823492) 1 NC_009725.1 conserved hypothetical protein YtoP; hypothetical protein 2823492 ytoP 5462306 ytoP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422286.1 2822419 R 326423 CDS YP_001422287.1 154687126 5462307 2823651..2823968 1 NC_009725.1 hypothetical protein YtzB; hypothetical protein 2823968 ytzB 5462307 ytzB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422287.1 2823651 D 326423 CDS YP_001422288.1 154687127 5462308 complement(2824024..2825721) 1 NC_009725.1 malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate; malate dehydrogenase 2825721 malS 5462308 malS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 malate dehydrogenase YP_001422288.1 2824024 R 326423 CDS YP_001422289.1 154687128 5462309 complement(2825800..2826645) 1 NC_009725.1 hypothetical protein YtnP; hypothetical protein 2826645 ytnP 5462309 ytnP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422289.1 2825800 R 326423 CDS YP_001422290.1 154687129 5462310 complement(2826704..2827357) 1 NC_009725.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 2827357 trmB 5462310 trmB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 tRNA (guanine-N(7)-)-methyltransferase YP_001422290.1 2826704 R 326423 CDS YP_001422291.1 154687130 5459582 2827543..2827821 1 NC_009725.1 hypothetical protein YtzH; hypothetical protein 2827821 ytzH 5459582 ytzH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422291.1 2827543 D 326423 CDS YP_001422292.1 154687131 5459583 complement(2827822..2828631) 1 NC_009725.1 conserved hypothetical protein YtmP; hypothetical protein 2828631 ytmP 5459583 ytmP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422292.1 2827822 R 326423 CDS YP_001422293.1 154687132 5459584 complement(2828890..2829819) 1 NC_009725.1 conserved hypothetical protein YtlR; hypothetical protein 2829819 ytlR 5459584 ytlR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422293.1 2828890 R 326423 CDS YP_001422294.1 154687133 5459585 complement(2829872..2830804) 1 NC_009725.1 conserved hypothetical protein YtlQ; hypothetical protein 2830804 ytlQ 5459585 ytlQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422294.1 2829872 R 326423 CDS YP_001422295.1 154687134 5459586 complement(2830831..2831382) 1 NC_009725.1 conserved hypothetical protein YtlP; hypothetical protein 2831382 ytlP 5459586 ytlP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422295.1 2830831 R 326423 CDS YP_001422296.1 154687135 5459587 2831511..2832443 1 NC_009725.1 cysteine synthase YtkP; hypothetical protein 2832443 ytkP 5459587 ytkP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422296.1 2831511 D 326423 CDS YP_001422297.1 154687136 5460317 complement(2832481..2833872) 1 NC_009725.1 divalent metal ion-dependent extracellular dipeptidase; able to hydrolyze a broad range of dipeptides but no tri-, tetra-, or larger oligopeptides; differences in the amino acid specificity of the cleavage site varies between species; similar to succinyl-diaminopimelate desuccinylases; dipeptidase PepV 2833872 ytjP 5460317 ytjP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 dipeptidase PepV YP_001422297.1 2832481 R 326423 CDS YP_001422298.1 154687137 5460318 2833968..2835272 1 NC_009725.1 conserved hypothetical protein YtiP; hypothetical protein 2835272 ytiP 5460318 ytiP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422298.1 2833968 D 326423 CDS YP_001422299.1 154687138 5460319 complement(2835307..2836467) 1 NC_009725.1 hypothetical protein YthQ; hypothetical protein 2836467 ythQ 5460319 ythQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422299.1 2835307 R 326423 CDS YP_001422300.1 154687139 5460320 complement(2836464..2837168) 1 NC_009725.1 ABC transporter (ATP-binding protein) YthP; hypothetical protein 2837168 ythP 5460320 ythP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422300.1 2836464 R 326423 CDS YP_001422301.1 154687140 5460321 2837449..2837670 1 NC_009725.1 hypothetical protein YtzE; hypothetical protein 2837670 ytzE 5460321 ytzE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422301.1 2837449 D 326423 CDS YP_001422302.1 154687141 5460322 complement(2837798..2838517) 1 NC_009725.1 pseudouridine synthase YtzF; hypothetical protein 2838517 ytzF 5460322 ytzF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422302.1 2837798 R 326423 CDS YP_001422303.1 154687142 5460323 complement(2838574..2840211) 1 NC_009725.1 spore cortex protein YtgP; hypothetical protein 2840211 ytgP 5460323 ytgP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422303.1 2838574 R 326423 CDS YP_001422304.1 154687143 5459822 2840434..2841684 1 NC_009725.1 conserved hypothetical protein YtfP; hypothetical protein 2841684 ytfP 5459822 ytfP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422304.1 2840434 D 326423 CDS YP_001422305.1 154687144 5459823 2841864..2843399 1 NC_009725.1 glycine betaine transporter OpuD; OpuD 2843399 opuD 5459823 opuD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 OpuD YP_001422305.1 2841864 D 326423 CDS YP_001422306.1 154687145 5459824 complement(2843435..2843617) 1 NC_009725.1 hypothetical protein yteV (csYteV; hypothetical protein 2843617 yteV 5459824 yteV Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422306.1 2843435 R 326423 CDS YP_001422307.1 154687146 5459825 2843818..2844843 1 NC_009725.1 transcriptional regulator (LacI family) MsmR; MsmR 2844843 msmR 5459825 msmR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 MsmR YP_001422307.1 2843818 D 326423 CDS YP_001422308.1 154687147 5459826 2844885..2846162 1 NC_009725.1 multiple sugar-binding protein MsmE; MsmE 2846162 msmE 5459826 msmE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 MsmE YP_001422308.1 2844885 D 326423 CDS YP_001422309.1 154687148 5459827 2846159..2847073 1 NC_009725.1 sugar transport protein AmyD; AmyD 2847073 amyD 5459827 amyD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 AmyD YP_001422309.1 2846159 D 326423 CDS YP_001422310.1 154687149 5459828 2847070..2847891 1 NC_009725.1 maltose transport protein AmyC; AmyC 2847891 amyC 5459828 amyC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 AmyC YP_001422310.1 2847070 D 326423 CDS YP_001422311.1 154687150 5462046 2847914..2849212 1 NC_009725.1 alpha-D-galactoside galactohydrolase MelA; MelA 2849212 melA 5462046 melA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 MelA YP_001422311.1 2847914 D 326423 CDS YP_001422312.1 154687151 5462047 complement(2849249..2849725) 1 NC_009725.1 hypothetical protein 2849725 5462047 RBAM_027230 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422312.1 2849249 R 326423 CDS YP_001422313.1 154687152 5462048 complement(2849810..2850121) 1 NC_009725.1 conserved hypothetical protein YtwF; hypothetical protein 2850121 ytwF 5462048 ytwF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422313.1 2849810 R 326423 CDS YP_001422314.1 154687153 5462049 complement(2850238..2852652) 1 NC_009725.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 2852652 leuS 5462049 leuS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 leucyl-tRNA synthetase YP_001422314.1 2850238 R 326423 CDS YP_001422315.1 154687154 5462050 complement(2853077..2853406) 1 NC_009725.1 hypothetical protein YtvB; hypothetical protein 2853406 ytvB 5462050 ytvB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422315.1 2853077 R 326423 CDS YP_001422316.1 154687155 5462051 2853801..2854586 1 NC_009725.1 conserved hypothetical protein YtvA; hypothetical protein 2854586 ytvA 5462051 ytvA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422316.1 2853801 D 326423 CDS YP_001422317.1 154687156 5462052 complement(2854629..2855813) 1 NC_009725.1 conserved hypothetical protein YttB; hypothetical protein 2855813 yttB 5462052 yttB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422317.1 2854629 R 326423 CDS YP_001422318.1 154687157 5460906 complement(2856009..2856728) 1 NC_009725.1 conserved hypothetical protein YwaF; hypothetical protein 2856728 ywaF 5460906 ywaF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422318.1 2856009 R 326423 CDS YP_001422319.1 154687158 5460907 complement(2856835..2858775) 1 NC_009725.1 bacitracin export permease protein BceB; BceB 2858775 bceB 5460907 bceB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 BceB YP_001422319.1 2856835 R 326423 CDS YP_001422320.1 154687159 5460908 complement(2858772..2859524) 1 NC_009725.1 bacitracin export ATP-binding protein BceA; BceA 2859524 bceA 5460908 bceA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 BceA YP_001422320.1 2858772 R 326423 CDS YP_001422321.1 154687160 5460909 complement(2859630..2860634) 1 NC_009725.1 sensor IM histidine kinase; smart00387; member of the two component regulatory system BceS/BceR involved in the regulation of bacitracin resistance; BceS 2860634 bceS 5460909 bceS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 BceS YP_001422321.1 2859630 R 326423 CDS YP_001422322.1 154687161 5460910 complement(2860627..2861322) 1 NC_009725.1 sensory transduction protein BceR; BceR 2861322 bceR 5460910 bceR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 BceR YP_001422322.1 2860627 R 326423 CDS YP_001422323.1 154687162 5460911 complement(2861386..2862696) 1 NC_009725.1 hypothetical protein YtrF; hypothetical protein 2862696 ytrF 5460911 ytrF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422323.1 2861386 R 326423 CDS YP_001422324.1 154687163 5460912 complement(2862686..2863387) 1 NC_009725.1 hypothetical ABC transporter ATP-binding protein YtrE; hypothetical protein 2863387 ytrE 5460912 ytrE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422324.1 2862686 R 326423 CDS YP_001422325.1 154687164 5460013 complement(2863397..2864377) 1 NC_009725.1 hypothetical protein YtrD; hypothetical protein 2864377 ytrD 5460013 ytrD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422325.1 2863397 R 326423 CDS YP_001422326.1 154687165 5460014 complement(2864414..2865400) 1 NC_009725.1 hypothetical protein yYtrC1; hypothetical protein 2865400 ytrC1 5460014 ytrC1 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422326.1 2864414 R 326423 CDS YP_001422327.1 154687166 5460015 complement(2865416..2866402) 1 NC_009725.1 hypothetical protein YtrC; hypothetical protein 2866402 ytrC 5460015 ytrC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422327.1 2865416 R 326423 CDS YP_001422328.1 154687167 5460016 complement(2866396..2867274) 1 NC_009725.1 ABC transporter (ATP-binding protein) YtrB; hypothetical protein 2867274 ytrB 5460016 ytrB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422328.1 2866396 R 326423 CDS YP_001422329.1 154687168 5460017 complement(2867267..2867659) 1 NC_009725.1 transcription regulator YtrA; hypothetical protein 2867659 ytrA 5460017 ytrA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422329.1 2867267 R 326423 CDS YP_001422330.1 154687169 5460018 complement(2868007..2868279) 1 NC_009725.1 hypothetical protein YtzC; hypothetical protein 2868279 ytzC 5460018 ytzC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422330.1 2868007 R 326423 CDS YP_001422331.1 154687170 5460019 complement(2868410..2870059) 1 NC_009725.1 synthesis of unknown secondary metabolite; COG0318; Acyl-CoA synthetases; NrsF 2870059 nrsF 5460019 nrsF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 NrsF YP_001422331.1 2868410 R 326423 CDS YP_001422332.1 154687171 5460437 complement(2870066..2871163) 1 NC_009725.1 synthesis of unknown secondary metabolite; NrsE 2871163 nrsE 5460437 nrsE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 NrsE YP_001422332.1 2870066 R 326423 CDS YP_001422333.1 154687172 5460438 complement(2871188..2873947) 1 NC_009725.1 synthesis of unkown secondary metabolite; cd00833; predicted polyketide synthase and hydrolase [COG0491]; NrsD 2873947 nrsD 5460438 nrsD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 NrsD YP_001422333.1 2871188 R 326423 CDS YP_001422334.1 154687173 5460439 complement(2873985..2884220) 1 NC_009725.1 synthesis of unknown secondary metabolite; COG1020; non-ribosomal peptide synthetase; NrsC 2884220 nrsC 5460439 nrsC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 NrsC YP_001422334.1 2873985 R 326423 CDS YP_001422335.1 154687174 5460440 complement(2884217..2885200) 1 NC_009725.1 synthesis of unknown secondary metabolite; cd02142, mcbC-like_oxidoreductase; NrsB 2885200 nrsB 5460440 nrsB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 NrsB YP_001422335.1 2884217 R 326423 CDS YP_001422336.1 154687175 5460441 complement(2885223..2885927) 1 NC_009725.1 synthesis of unknown secondary metabolite; thioesterase involved in non-ribosomal peptide synthesis; NrsA 2885927 nrsA 5460441 nrsA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 NrsA YP_001422336.1 2885223 R 326423 CDS YP_001422337.1 154687176 5460442 2886193..2887860 1 NC_009725.1 permease MDR type 2887860 5460442 RBAM_027480 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 permease MDR type YP_001422337.1 2886193 D 326423 CDS YP_001422338.1 154687177 5460443 2887947..2888915 1 NC_009725.1 conserved hypothetical protein YtqA; hypothetical protein 2888915 ytqA 5460443 ytqA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422338.1 2887947 D 326423 CDS YP_001422339.1 154687178 5462601 2888912..2889493 1 NC_009725.1 conserved hypothetical protein YtqB; hypothetical protein 2889493 ytqB 5462601 ytqB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422339.1 2888912 D 326423 CDS YP_001422340.1 154687179 5462602 complement(2889826..2890635) 1 NC_009725.1 glycerophosphoryl diester phosphodiesterase 2890635 5462602 RBAM_027510 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 glycerophosphoryl diester phosphodiesterase YP_001422340.1 2889826 R 326423 CDS YP_001422341.1 154687180 5462603 complement(2890744..2891826) 1 NC_009725.1 hypothetical protein YtpB; hypothetical protein 2891826 ytpB 5462603 ytpB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422341.1 2890744 R 326423 CDS YP_001422342.1 154687181 5462604 complement(2891844..2892623) 1 NC_009725.1 lysophospholipase YtpA; hypothetical protein 2892623 ytpA 5462604 ytpA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422342.1 2891844 R 326423 CDS YP_001422343.1 154687182 5462605 2892667..2893185 1 NC_009725.1 conserved hypothetical protein YtoA; hypothetical protein 2893185 ytoA 5462605 ytoA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422343.1 2892667 D 326423 CDS YP_001422344.1 154687183 5462606 complement(2893361..2894764) 1 NC_009725.1 amino acid permease YtnA; hypothetical protein 2894764 ytnA 5462606 ytnA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422344.1 2893361 R 326423 CDS YP_001422345.1 154687184 5462607 complement(2894969..2896867) 1 NC_009725.1 asparagine synthetase AsnB; hypothetical protein 2896867 asnB 5462607 asnB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422345.1 2894969 R 326423 CDS YP_001422346.1 154687185 5463173 complement(2897011..2898213) 1 NC_009725.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 2898213 metK 5463173 metK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 S-adenosylmethionine synthetase YP_001422346.1 2897011 R 326423 CDS YP_001422347.1 154687186 5463174 2898720..2900303 1 NC_009725.1 PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 2900303 pckA 5463174 pckA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 phosphoenolpyruvate carboxykinase YP_001422347.1 2898720 D 326423 CDS YP_001422348.1 154687187 5463175 complement(2900346..2900588) 1 NC_009725.1 hypothetical protein YtmB; hypothetical protein 2900588 ytmB 5463175 ytmB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422348.1 2900346 R 326423 CDS YP_001422349.1 154687188 5463176 complement(2900646..2901419) 1 NC_009725.1 conserved hypothetical protein YtmA; hypothetical protein 2901419 ytmA 5463176 ytmA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422349.1 2900646 R 326423 CDS YP_001422350.1 154687189 5463177 2901557..2902561 1 NC_009725.1 ABC-transport system substrate-binding protein YtlA; hypothetical protein 2902561 ytlA 5463177 ytlA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422350.1 2901557 D 326423 CDS YP_001422351.1 154687190 5463178 2902573..2903355 1 NC_009725.1 ABC-transport system (ATP-binding protein) YtlC; hypothetical protein 2903355 ytlC 5463178 ytlC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422351.1 2902573 D 326423 CDS YP_001422352.1 154687191 5463179 2903330..2904142 1 NC_009725.1 ABC transporter (permease) YtlD; hypothetical protein 2904142 ytlD 5463179 ytlD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422352.1 2903330 D 326423 CDS YP_001422353.1 154687192 5463166 complement(2904178..2904657) 1 NC_009725.1 hypothetical protein YtkD; hypothetical protein 2904657 ytkD 5463166 ytkD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422353.1 2904178 R 326423 CDS YP_001422354.1 154687193 5463167 complement(2904790..2905206) 1 NC_009725.1 autolytic amidase YtkC; hypothetical protein 2905206 ytkC 5463167 ytkC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422354.1 2904790 R 326423 CDS YP_001422355.1 154687194 5463168 complement(2905346..2905783) 1 NC_009725.1 DNA-protecting protein Dps; Dps 2905783 dps 5463168 dps Bacillus amyloliquefaciens subsp. plantarum str. FZB42 Dps YP_001422355.1 2905346 R 326423 CDS YP_001422356.1 154687195 5463169 complement(2906054..2906497) 1 NC_009725.1 hypothetical protein YtkA; hypothetical protein 2906497 ytkA 5463169 ytkA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422356.1 2906054 R 326423 CDS YP_001422357.1 154687196 5463170 complement(2906612..2907085) 1 NC_009725.1 catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2; S-ribosylhomocysteinase 2907085 luxS 5463170 luxS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 S-ribosylhomocysteinase YP_001422357.1 2906612 R 326423 CDS YP_001422358.1 154687197 5463171 2907210..2907437 1 NC_009725.1 conserved hypothetical protein YtjA; hypothetical protein 2907437 ytjA 5463171 ytjA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422358.1 2907210 D 326423 CDS YP_001422359.1 154687198 5463172 complement(2907434..2908003) 1 NC_009725.1 carbonic anhydrase YtiB; hypothetical protein 2908003 ytiB 5463172 ytiB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422359.1 2907434 R 326423 CDS YP_001422360.1 154687199 5463154 complement(2908122..2908370) 1 NC_009725.1 RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 2908370 rpmE2 5463154 rpmE2 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 50S ribosomal protein L31 YP_001422360.1 2908122 R 326423 CDS YP_001422361.1 154687200 5463155 2908562..2909899 1 NC_009725.1 cytochrome d oxidase subunit YthA; hypothetical protein 2909899 ythA 5463155 ythA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422361.1 2908562 D 326423 CDS YP_001422362.1 154687201 5463156 2909922..2910962 1 NC_009725.1 conserved hypothetical protein YthB; hypothetical protein 2910962 ythB 5463156 ythB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422362.1 2909922 D 326423 CDS YP_001422363.1 154687202 5463157 2911020..2911178 1 NC_009725.1 hypothetical protein 2911178 5463157 RBAM_027740 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422363.1 2911020 D 326423 CDS YP_001422364.1 154687203 5463158 complement(2911159..2911482) 1 NC_009725.1 hypothetical protein 2911482 5463158 RBAM_027750 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422364.1 2911159 R 326423 CDS YP_001422365.1 154687204 5463159 complement(2911562..2912677) 1 NC_009725.1 O-succinylbenzoate-CoA synthase MenC; MenC 2912677 menC 5463159 menC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 MenC YP_001422365.1 2911562 R 326423 CDS YP_001422366.1 154687205 5463160 complement(2912674..2914137) 1 NC_009725.1 converts O-succinylbenzoate to O-succinylbenzoyl-CoA; O-succinylbenzoic acid--CoA ligase 2914137 menE 5463160 menE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 O-succinylbenzoic acid--CoA ligase YP_001422366.1 2912674 R 326423 CDS YP_001422367.1 154687206 5463147 complement(2914225..2915043) 1 NC_009725.1 catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA; naphthoate synthase 2915043 menB 5463147 menB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 naphthoate synthase YP_001422367.1 2914225 R 326423 CDS YP_001422368.1 154687207 5463148 complement(2915102..2915926) 1 NC_009725.1 prolyl aminopeptidase YtxM; hypothetical protein 2915926 ytxM 5463148 ytxM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422368.1 2915102 R 326423 CDS YP_001422369.1 154687208 5463149 complement(2915914..2917650) 1 NC_009725.1 SEPHCHC synthase; forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1- carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis; 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase 2917650 menD 5463149 menD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase YP_001422369.1 2915914 R 326423 CDS YP_001422370.1 154687209 5463150 complement(2917647..2919062) 1 NC_009725.1 menaquinone-specific isochorismate synthase MenF; MenF 2919062 menF 5463150 menF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 MenF YP_001422370.1 2917647 R 326423 CDS YP_001422371.1 154687210 5463151 2919345..2920064 1 NC_009725.1 conserved hypothetical protein YteA; hypothetical protein 2920064 yteA 5463151 yteA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422371.1 2919345 D 326423 CDS YP_001422372.1 154687211 5463152 2920221..2920691 1 NC_009725.1 conserved hypothetical protein YtaB; hypothetical protein 2920691 ytaB 5463152 ytaB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422372.1 2920221 D 326423 CDS YP_001422373.1 154687212 5463193 2928211..2928792 1 NC_009725.1 conserved hypothetical protein YuaJ; hypothetical protein 2928792 yuaJ 5463193 yuaJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422373.1 2928211 D 326423 CDS YP_001422374.1 154687213 5463194 complement(2928823..2930352) 1 NC_009725.1 conserved hypothetical protein YuaG; hypothetical protein 2930352 yuaG 5463194 yuaG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422374.1 2928823 R 326423 CDS YP_001422375.1 154687214 5463195 complement(2930372..2930902) 1 NC_009725.1 hypothetical protein YuaF; hypothetical protein 2930902 yuaF 5463195 yuaF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422375.1 2930372 R 326423 CDS YP_001422376.1 154687215 5463196 2931049..2931537 1 NC_009725.1 hypothetical protein YuaE; hypothetical protein 2931537 yuaE 5463196 yuaE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422376.1 2931049 D 326423 CDS YP_001422377.1 154687216 5463197 complement(2931538..2932119) 1 NC_009725.1 conserved hypothetical protein YuaD; hypothetical protein 2932119 yuaD 5463197 yuaD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422377.1 2931538 R 326423 CDS YP_001422378.1 154687217 5463186 complement(2932190..2933386) 1 NC_009725.1 alcohol dehydrogenase GbsB; GbsB 2933386 gbsB 5463186 gbsB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GbsB YP_001422378.1 2932190 R 326423 CDS YP_001422379.1 154687218 5463187 complement(2933416..2934888) 1 NC_009725.1 glycine betaine aldehyde dehydrogenase GbsA; GbsA 2934888 gbsA 5463187 gbsA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GbsA YP_001422379.1 2933416 R 326423 CDS YP_001422380.1 154687219 5463188 2935089..2935643 1 NC_009725.1 conserved hypothetical protein YuaC; hypothetical protein 2935643 yuaC 5463188 yuaC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422380.1 2935089 D 326423 CDS YP_001422381.1 154687220 5463189 2935798..2936343 1 NC_009725.1 hypothetical protein YuaB; hypothetical protein 2936343 yuaB 5463189 yuaB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422381.1 2935798 D 326423 CDS YP_001422382.1 154687221 5463190 2936507..2937175 1 NC_009725.1 conserved hypothetical protein YuaA; hypothetical protein 2937175 yuaA 5463190 yuaA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422382.1 2936507 D 326423 CDS YP_001422383.1 154687222 5463191 complement(2937209..2938054) 1 NC_009725.1 N-acetylmuramoyl-L-alanine amidase YubE; hypothetical protein 2938054 yubE 5463191 yubE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422383.1 2937209 R 326423 CDS YP_001422384.1 154687223 5463192 complement(2938196..2939371) 1 NC_009725.1 flavohemoprotein; catalyzes the formation of nitrate from nitric oxide; can also catalyze the reduction of dihydropteridine; nitric oxide dioxygenase 2939371 hmp1 5463192 hmp1 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 nitric oxide dioxygenase YP_001422384.1 2938196 R 326423 CDS YP_001422385.1 154687224 5463161 2939589..2940230 1 NC_009725.1 hypothetical protein 2940230 5463161 RBAM_028220 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422385.1 2939589 D 326423 CDS YP_001422386.1 154687225 5463162 complement(2940291..2940611) 1 NC_009725.1 hypothetical protein YjcN; hypothetical protein 2940611 yjcN 5463162 yjcN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422386.1 2940291 R 326423 CDS YP_001422387.1 154687226 5463164 complement(2940925..2941755) 1 NC_009725.1 BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase 2941755 yubB 5463164 yubB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 undecaprenyl pyrophosphate phosphatase YP_001422387.1 2940925 R 326423 CDS YP_001422388.1 154687227 5463165 complement(2941847..2943007) 1 NC_009725.1 conserved hypothetical protein YubA; hypothetical protein 2943007 yubA 5463165 yubA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422388.1 2941847 R 326423 CDS YP_001422389.1 154687228 5463205 2943187..2944173 1 NC_009725.1 conserved hypothetical protein YulF; hypothetical protein 2944173 yulF 5463205 yulF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422389.1 2943187 D 326423 CDS YP_001422390.1 154687229 5463206 complement(2944205..2944729) 1 NC_009725.1 hypothetical protein 2944729 5463206 RBAM_028280 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422390.1 2944205 R 326423 CDS YP_001422391.1 154687230 5463207 complement(2944795..2946801) 1 NC_009725.1 methyl-accepting chemotaxis protein TlpB; TlpB 2946801 tlpB 5463207 tlpB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 TlpB YP_001422391.1 2944795 R 326423 CDS YP_001422392.1 154687231 5463208 complement(2946917..2948902) 1 NC_009725.1 methyl-accepting chemotaxis protein McpA; McpA 2948902 mcpA 5463208 mcpA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 McpA YP_001422392.1 2946917 R 326423 CDS YP_001422393.1 154687232 5463209 complement(2949030..2951018) 1 NC_009725.1 methyl-accepting chemotaxis protein TlpA; TlpA 2951018 tlpA 5463209 tlpA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 TlpA YP_001422393.1 2949030 R 326423 CDS YP_001422394.1 154687233 5463210 complement(2951203..2953188) 1 NC_009725.1 methyl-accepting chemotaxis protein McpB; McpB 2953188 mcpB 5463210 mcpB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 McpB YP_001422394.1 2951203 R 326423 CDS YP_001422395.1 154687234 5463211 2953328..2954071 1 NC_009725.1 involved in assembly of spore coat proteins such as GerQ by catalyzing epsilon-(gamma-glutamyl)lysine cross links; transglutaminase 2954071 tgl 5463211 tgl Bacillus amyloliquefaciens subsp. plantarum str. FZB42 transglutaminase YP_001422395.1 2953328 D 326423 CDS YP_001422396.1 154687235 5461592 complement(2954089..2954340) 1 NC_009725.1 hypothetical protein 2954340 5461592 RBAM_028340 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422396.1 2954089 R 326423 CDS YP_001422397.1 154687236 5461593 complement(2954366..2955397) 1 NC_009725.1 2-nitropropane dioxygenase YrpB; hypothetical protein 2955397 yrpB 5461593 yrpB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422397.1 2954366 R 326423 CDS YP_001422398.1 154687237 5461594 complement(2955390..2955812) 1 NC_009725.1 conserved hypothetical protein YugU; hypothetical protein 2955812 yugU 5461594 yugU Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422398.1 2955390 R 326423 CDS YP_001422399.1 154687238 5461595 complement(2955934..2957592) 1 NC_009725.1 glycosyl hydrolase family protein YugT; hypothetical protein 2957592 yugT 5461595 yugT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422399.1 2955934 R 326423 CDS YP_001422400.1 154687239 5461596 complement(2957682..2958971) 1 NC_009725.1 conserved hypothetical protein YugS; hypothetical protein 2958971 yugS 5461596 yugS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422400.1 2957682 R 326423 CDS YP_001422401.1 154687240 5461597 complement(2959014..2959691) 1 NC_009725.1 conserved hypothetical protein YugP; hypothetical protein 2959691 yugP 5461597 yugP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422401.1 2959014 R 326423 CDS YP_001422402.1 154687241 5461598 2960385..2961371 1 NC_009725.1 conserved hypothetical protein YugO; hypothetical protein 2961371 yugO 5461598 yugO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422402.1 2960385 D 326423 CDS YP_001422403.1 154687242 5460450 complement(2961368..2961772) 1 NC_009725.1 hypothetical protein YugN; hypothetical protein 2961772 yugN 5460450 yugN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422403.1 2961368 R 326423 CDS YP_001422404.1 154687243 5460451 complement(2961795..2962193) 1 NC_009725.1 hypothetical protein YugM; hypothetical protein 2962193 yugM 5460451 yugM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422404.1 2961795 R 326423 CDS YP_001422405.1 154687244 5460452 complement(2962215..2963567) 1 NC_009725.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 2963567 pgi 5460452 pgi Bacillus amyloliquefaciens subsp. plantarum str. FZB42 glucose-6-phosphate isomerase YP_001422405.1 2962215 R 326423 CDS YP_001422406.1 154687245 5460453 2963965..2964531 1 NC_009725.1 hypothetical protein 2964531 5460453 RBAM_028440 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422406.1 2963965 D 326423 CDS YP_001422407.1 154687246 5460454 2964656..2965300 1 NC_009725.1 hypothetical protein 2965300 5460454 RBAM_028450 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422407.1 2964656 D 326423 CDS YP_001422408.1 154687247 5460455 complement(2965597..2966769) 1 NC_009725.1 NADH-dependent butanol dehydrogenase YugK; hypothetical protein 2966769 yugK 5460455 yugK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422408.1 2965597 R 326423 CDS YP_001422409.1 154687248 5460456 complement(2966856..2968019) 1 NC_009725.1 NADH-dependent butanol dehydrogenase YugJ; hypothetical protein 2968019 yugJ 5460456 yugJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422409.1 2966856 R 326423 CDS YP_001422410.1 154687249 5459623 2968250..2968486 1 NC_009725.1 conserved hypothetical protein YuzA; hypothetical protein 2968486 yuzA 5459623 yuzA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422410.1 2968250 D 326423 CDS YP_001422411.1 154687250 5459624 complement(2968534..2968926) 1 NC_009725.1 induced by heat shock, salt stress, oxidative stress, glucose limitation and oxygen limitation; general stress protein 13 2968926 yugI 5459624 yugI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 general stress protein 13 YP_001422411.1 2968534 R 326423 CDS YP_001422412.1 154687251 5459625 complement(2969123..2970259) 1 NC_009725.1 alanine transaminase AlaT; hypothetical protein 2970259 alaT 5459625 alaT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422412.1 2969123 R 326423 CDS YP_001422413.1 154687252 5459626 complement(2970293..2970793) 1 NC_009725.1 transcriptional regulator (Lrp/AsnC family) AlaR; AlaR 2970793 alaR 5459626 alaR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 AlaR YP_001422413.1 2970293 R 326423 CDS YP_001422414.1 154687253 5459627 2970946..2971767 1 NC_009725.1 conserved hypothetical protein YugF; hypothetical protein 2971767 yugF 5459627 yugF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422414.1 2970946 D 326423 CDS YP_001422415.1 154687254 5459628 complement(2971792..2972061) 1 NC_009725.1 hypothetical protein YugE; hypothetical protein 2972061 yugE 5459628 yugE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422415.1 2971792 R 326423 CDS YP_001422416.1 154687255 5459629 2972139..2973302 1 NC_009725.1 aminotransferase PatB; hypothetical protein 2973302 patB 5459629 patB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422416.1 2972139 D 326423 CDS YP_001422417.1 154687256 5462837 2973425..2974708 1 NC_009725.1 sporulation-specific ATP-dependent protein kinase KinB; KinB 2974708 kinB 5462837 kinB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 KinB YP_001422417.1 2973425 D 326423 CDS YP_001422418.1 154687257 5462838 2974756..2975142 1 NC_009725.1 kinase-associated lipoprotein B precursor KapB; KapB 2975142 kapB 5462838 kapB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 KapB YP_001422418.1 2974756 D 326423 CDS YP_001422419.1 154687258 5462839 complement(2975167..2975784) 1 NC_009725.1 inhibitor of the KinA pathway of sporulation; sporulation inhibitor KapD 2975784 kapD 5462839 kapD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 sporulation inhibitor KapD YP_001422419.1 2975167 R 326423 CDS YP_001422420.1 154687259 5462840 2976041..2977180 1 NC_009725.1 conserved hypothetical protein YuxJ; hypothetical protein 2977180 yuxJ 5462840 yuxJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422420.1 2976041 D 326423 CDS YP_001422421.1 154687260 5462841 2977270..2979144 1 NC_009725.1 penicillin-binding protein IV PbpD; PbpD 2979144 pbpD 5462841 pbpD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 PbpD YP_001422421.1 2977270 D 326423 CDS YP_001422422.1 154687261 5462842 2979166..2979579 1 NC_009725.1 conserved hypothetical protein YuxK; hypothetical protein 2979579 yuxK 5462842 yuxK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422422.1 2979166 D 326423 CDS YP_001422423.1 154687262 5462843 complement(2979594..2980151) 1 NC_009725.1 hypothetical protein YufK; hypothetical protein 2980151 yufK 5462843 yufK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422423.1 2979594 R 326423 CDS YP_001422424.1 154687263 5461200 2980326..2981927 1 NC_009725.1 sensor histidine kinase; C4-dicarboxylate-sensing histidine kinase; part of two-component regulatory system with DcuR; regulates anaerobic fumarate respiration; sensory histidine kinase DcuS 2981927 yufL 5461200 yufL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 sensory histidine kinase DcuS YP_001422424.1 2980326 D 326423 CDS YP_001422425.1 154687264 5461201 2981920..2982627 1 NC_009725.1 two-component response regulator; COG4565, CitB like RR; hypothetical protein 2982627 yufM 5461201 yufM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422425.1 2981920 D 326423 CDS YP_001422426.1 154687265 5461202 2983029..2984102 1 NC_009725.1 hypothetical lipoprotein YufN; hypothetical protein 2984102 yufN 5461202 yufN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422426.1 2983029 D 326423 CDS YP_001422427.1 154687266 5461203 2984244..2985776 1 NC_009725.1 ABC transport system, ATPase component YufO; hypothetical protein 2985776 yufO 5461203 yufO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422427.1 2984244 D 326423 CDS YP_001422428.1 154687267 5461204 2985769..2986815 1 NC_009725.1 ABC transporter permease YufP; hypothetical protein 2986815 yufP 5461204 yufP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422428.1 2985769 D 326423 CDS YP_001422429.1 154687268 5461205 2986816..2987775 1 NC_009725.1 ABC transporter permease YufQ; hypothetical protein 2987775 yufQ 5461205 yufQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422429.1 2986816 D 326423 CDS YP_001422430.1 154687269 5461206 2988281..2990683 1 NC_009725.1 subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit A 2990683 mrpA 5461206 mrpA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 monovalent cation/H+ antiporter subunit A YP_001422430.1 2988281 D 326423 CDS YP_001422431.1 154687270 5459575 2990680..2991111 1 NC_009725.1 subunit B of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in the case of S. meliloti it was proved to be involved specifically with K+ transport; monovalent cation/H+ antiporter subunit B 2991111 mrpB 5459575 mrpB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 monovalent cation/H+ antiporter subunit B YP_001422431.1 2990680 D 326423 CDS YP_001422432.1 154687271 5459576 2991111..2991452 1 NC_009725.1 subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit C 2991452 mrpC 5459576 mrpC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 monovalent cation/H+ antiporter subunit C YP_001422432.1 2991111 D 326423 CDS YP_001422433.1 154687272 5459577 2991436..2992926 1 NC_009725.1 subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; monovalent cation/H+ antiporter subunit D 2992926 mrpD 5459577 mrpD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 monovalent cation/H+ antiporter subunit D YP_001422433.1 2991436 D 326423 CDS YP_001422434.1 154687273 5459578 2992932..2993408 1 NC_009725.1 subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit E 2993408 mrpE 5459578 mrpE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 monovalent cation/H+ antiporter subunit E YP_001422434.1 2992932 D 326423 CDS YP_001422435.1 154687274 5459579 2993408..2993692 1 NC_009725.1 subunit F of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit F 2993692 mrpF 5459579 mrpF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 monovalent cation/H+ antiporter subunit F YP_001422435.1 2993408 D 326423 CDS YP_001422436.1 154687275 5459580 2993676..2994050 1 NC_009725.1 subunit G of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; monovalent cation/H+ antiporter subunit G 2994050 mrpG 5459580 mrpG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 monovalent cation/H+ antiporter subunit G YP_001422436.1 2993676 D 326423 CDS YP_001422437.1 154687276 5459581 complement(2994090..2994473) 1 NC_009725.1 conserved hypothetical protein YuxO; hypothetical protein 2994473 yuxO 5459581 yuxO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422437.1 2994090 R 326423 CDS YP_001422438.1 154687277 5462124 complement(2994495..2995139) 1 NC_009725.1 two component response regulator; COG2197, CitB like RR containing a CheY-like receiver domain and a HTH DNA-binding domain; positive regulation of late competence genes and surfactin production; ComA 2995139 comA 5462124 comA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ComA YP_001422438.1 2994495 R 326423 CDS YP_001422439.1 154687278 5462125 complement(2995220..2997520) 1 NC_009725.1 sensor histidine kinase; COG4585, competence regulatory protein; polytopic membrane protein activated by comX pheromone, and donates a phosphate to ComA; ComP 2997520 comP 5462125 comP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ComP YP_001422439.1 2995220 R 326423 CDS YP_001422440.1 154687279 5462126 complement(2997534..2997707) 1 NC_009725.1 competence pheromone precursor ComX; ComX 2997707 comX 5462126 comX Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ComX YP_001422440.1 2997534 R 326423 CDS YP_001422441.1 154687280 5462127 complement(2997676..2998536) 1 NC_009725.1 transcriptional regulator of late competence operon (comG) and surfactin expression ComQ; ComQ 2998536 comQ 5462127 comQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ComQ YP_001422441.1 2997676 R 326423 CDS YP_001422442.1 154687281 5462128 complement(2998744..2998884) 1 NC_009725.1 degradation enzyme regulation protein DegQ; hypothetical protein 2998884 degQ 5462128 degQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422442.1 2998744 R 326423 CDS YP_001422443.1 154687282 5462129 2999349..2999690 1 NC_009725.1 hypothetical protein YuzC; hypothetical protein 2999690 yuzC 5462129 yuzC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422443.1 2999349 D 326423 CDS YP_001422444.1 154687283 5462130 complement(2999697..3000920) 1 NC_009725.1 conserved hypothetical protein YuxH; hypothetical protein 3000920 yuxH 5462130 yuxH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422444.1 2999697 R 326423 CDS YP_001422445.1 154687284 5462404 complement(3001050..3002513) 1 NC_009725.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 3002513 yueK 5462404 yueK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 nicotinate phosphoribosyltransferase YP_001422445.1 3001050 R 326423 CDS YP_001422446.1 154687285 5462405 complement(3002534..3003085) 1 NC_009725.1 conserved hypothetical protein YueJ; hypothetical protein 3003085 yueJ 5462405 yueJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422446.1 3002534 R 326423 CDS YP_001422447.1 154687286 5462406 complement(3003182..3003580) 1 NC_009725.1 conserved hypothetical protein YueI; hypothetical protein 3003580 yueI 5462406 yueI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422447.1 3003182 R 326423 CDS YP_001422448.1 154687287 5462407 complement(3003646..3003894) 1 NC_009725.1 hypothetical protein YueH; hypothetical protein 3003894 yueH 5462407 yueH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422448.1 3003646 R 326423 CDS YP_001422449.1 154687288 5462408 complement(3003967..3004188) 1 NC_009725.1 hypothetical protein YueG; hypothetical protein 3004188 yueG 5462408 yueG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422449.1 3003967 R 326423 CDS YP_001422450.1 154687289 5462409 complement(3004250..3005602) 1 NC_009725.1 conserved hypothetical protein YueF; hypothetical protein 3005602 yueF 5462409 yueF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422450.1 3004250 R 326423 CDS YP_001422451.1 154687290 5462410 complement(3005867..3006397) 1 NC_009725.1 conserved hypothetical protein YueE; hypothetical protein 3006397 yueE 5462410 yueE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422451.1 3005867 R 326423 CDS YP_001422452.1 154687291 5460052 complement(3006562..3007293) 1 NC_009725.1 conserved hypothetical protein YueD; short chain dehydrogenase 3007293 yueD 5460052 yueD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 short chain dehydrogenase YP_001422452.1 3006562 R 326423 CDS YP_001422453.1 154687292 5460053 complement(3007354..3007827) 1 NC_009725.1 hypothetical protein YueC; hypothetical protein 3007827 yueC 5460053 yueC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422453.1 3007354 R 326423 CDS YP_001422454.1 154687293 5460054 complement(3007835..3010960) 1 NC_009725.1 bacteriophage SPP1 adsorption protein YueB; hypothetical protein 3010960 yueB 5460054 yueB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422454.1 3007835 R 326423 CDS YP_001422455.1 154687294 5460055 complement(3010957..3015432) 1 NC_009725.1 conserved hypothetical protein YukA; hypothetical protein 3015432 yukA 5460055 yukA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422455.1 3010957 R 326423 CDS YP_001422456.1 154687295 5460056 complement(3015487..3016773) 1 NC_009725.1 conserved hypothetical protein YukC; hypothetical protein 3016773 yukC 5460056 yukC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422456.1 3015487 R 326423 CDS YP_001422457.1 154687296 5460057 complement(3016788..3017033) 1 NC_009725.1 conserved hypothetical protein YukD; hypothetical protein 3017033 yukD 5460057 yukD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422457.1 3016788 R 326423 CDS YP_001422458.1 154687297 5460058 complement(3017103..3017396) 1 NC_009725.1 conserved hypothetical protein YukE; hypothetical protein 3017396 yukE 5460058 yukE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422458.1 3017103 R 326423 CDS YP_001422459.1 154687298 5460801 3017712..3018941 1 NC_009725.1 conserved hypothetical protein YukF; hypothetical protein 3018941 yukF 5460801 yukF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422459.1 3017712 D 326423 CDS YP_001422460.1 154687299 5460802 3019045..3020175 1 NC_009725.1 alanine dehydrogenase Ald; hypothetical protein 3020175 ald 5460802 ald Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422460.1 3019045 D 326423 CDS YP_001422461.1 154687300 5460803 3020294..3020971 1 NC_009725.1 conserved hypothetical protein YukJ; hypothetical protein 3020971 yukJ 5460803 yukJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422461.1 3020294 D 326423 CDS YP_001422462.1 154687301 5460804 complement(3021016..3021231) 1 NC_009725.1 hypothetical protein 3021231 5460804 RBAM_029000 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422462.1 3021016 R 326423 CDS YP_001422463.1 154687302 5460805 complement(3021250..3028377) 1 NC_009725.1 siderophore 2,3-dihydroxybenzoate/bacillibactin synthesis; dimodular nonribosomal peptide synthetase; DhbF 3028377 dhbF 5460805 dhbF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DhbF YP_001422463.1 3021250 R 326423 CDS YP_001422464.1 154687303 5460806 complement(3028392..3029318) 1 NC_009725.1 siderophore 2,3-dihydroxybenzoate/bacillibactin synthesis; cd01013; isochorismatase; DhbB 3029318 dhbB 5460806 dhbB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DhbB YP_001422464.1 3028392 R 326423 CDS YP_001422465.1 154687304 5460807 complement(3029336..3030961) 1 NC_009725.1 siderophore 2,3-dihydroxybenzoate/bacillibactin synthesis; COG1021, EntE, 2,3-dihydroxybenzoate-AMP ligase; DhbE 3030961 dhbE 5460807 dhbE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DhbE YP_001422465.1 3029336 R 326423 CDS YP_001422466.1 154687305 5461229 complement(3030980..3032176) 1 NC_009725.1 siderophore 2,3 dihydroxybenzoate/bacillibactin synthesis; synthesizes isochorismate from chorismate as part of the biosynthesis of the siderophore 2,3-dihydroxybenzoate; can also be used in menaquinone synthesis; isochorismate synthase DhbC 3032176 dhbC 5461229 dhbC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 isochorismate synthase DhbC YP_001422466.1 3030980 R 326423 CDS YP_001422467.1 154687306 5461230 complement(3032200..3032970) 1 NC_009725.1 siderophore 2,3 dihydroxybenzoate/bacillibactin synthesis; catalyzes the formation of 2,3-dihydroxybenzoate from 2,3-dihydro-2,3-dihydroxybenzoate; involved in the biosynthesis of siderophores, enterobactin, bacillibactin or vibriobactin; 2,3-dihydroxybenzoate-2,3-dehydrogenase 3032970 dhbA 5461230 dhbA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 2,3-dihydroxybenzoate-2,3-dehydrogenase YP_001422467.1 3032200 R 326423 CDS YP_001422468.1 154687307 5461231 complement(3033121..3033990) 1 NC_009725.1 conserved hypothetical protein YuiI; hypothetical protein 3033990 yuiI 5461231 yuiI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422468.1 3033121 R 326423 CDS YP_001422469.1 154687308 5461232 complement(3034166..3034762) 1 NC_009725.1 sulfite oxidase YuiH; hypothetical protein 3034762 yuiH 5461232 yuiH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422469.1 3034166 R 326423 CDS YP_001422470.1 154687309 5461233 3034862..3035455 1 NC_009725.1 conserved hypothetical protein YuiG; hypothetical protein 3035455 yuiG 5461233 yuiG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422470.1 3034862 D 326423 CDS YP_001422471.1 154687310 5461234 complement(3035502..3036830) 1 NC_009725.1 conserved hypothetical protein YuiF; hypothetical protein 3036830 yuiF 5461234 yuiF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422471.1 3035502 R 326423 CDS YP_001422472.1 154687311 5461235 complement(3036963..3038453) 1 NC_009725.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 3038453 yuiE 5461235 yuiE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 leucyl aminopeptidase YP_001422472.1 3036963 R 326423 CDS YP_001422473.1 154687312 5460756 3038601..3039077 1 NC_009725.1 conserved hypothetical protein YuiD; hypothetical protein 3039077 yuiD 5460756 yuiD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422473.1 3038601 D 326423 CDS YP_001422474.1 154687313 5460757 complement(3039107..3039748) 1 NC_009725.1 conserved hypothetical protein YuiC; hypothetical protein 3039748 yuiC 5460757 yuiC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422474.1 3039107 R 326423 CDS YP_001422475.1 154687314 5460758 complement(3039849..3040175) 1 NC_009725.1 hypothetical protein YuiB; hypothetical protein 3040175 yuiB 5460758 yuiB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422475.1 3039849 R 326423 CDS YP_001422476.1 154687315 5460759 complement(3040238..3040363) 1 NC_009725.1 hypothetical protein YuiA; hypothetical protein 3040363 yuiA 5460759 yuiA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422476.1 3040238 R 326423 CDS YP_001422477.1 154687316 5460760 complement(3040537..3041757) 1 NC_009725.1 NADH2 dehydrogenase YumB; hypothetical protein 3041757 yumB 5460760 yumB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422477.1 3040537 R 326423 CDS YP_001422478.1 154687317 5460761 3042069..3043064 1 NC_009725.1 conserved hypothetical protein YumC; hypothetical protein 3043064 yumC 5460761 yumC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422478.1 3042069 D 326423 CDS YP_001422479.1 154687318 5460762 complement(3043105..3043248) 1 NC_009725.1 hypothetical protein YuzG; hypothetical protein 3043248 yuzG 5460762 yuzG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422479.1 3043105 R 326423 CDS YP_001422480.1 154687319 5460081 3043465..3044445 1 NC_009725.1 GMP reductase GuaC; guanosine 5'-monophosphate oxidoreductase 3044445 guaC 5460081 guaC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 guanosine 5'-monophosphate oxidoreductase YP_001422480.1 3043465 D 326423 CDS YP_001422481.1 154687320 5460082 complement(3044506..3044727) 1 NC_009725.1 hypothetical protein 3044727 5460082 RBAM_029190 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422481.1 3044506 R 326423 CDS YP_001422482.1 154687321 5460083 complement(3044744..3045193) 1 NC_009725.1 hypothetical protein 3045193 5460083 RBAM_029200 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422482.1 3044744 R 326423 CDS YP_001422483.1 154687322 5460084 complement(3045268..3045972) 1 NC_009725.1 ABC-transporter ATP-binding protein 3045972 5460084 RBAM_029210 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ABC-transporter ATP-binding protein YP_001422483.1 3045268 R 326423 CDS YP_001422484.1 154687323 5460085 complement(3045965..3047620) 1 NC_009725.1 hypothetical protein 3047620 5460085 RBAM_029220 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422484.1 3045965 R 326423 CDS YP_001422485.1 154687324 5460086 complement(3047703..3048041) 1 NC_009725.1 hypothetical protein 3048041 5460086 RBAM_029230 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422485.1 3047703 R 326423 CDS YP_001422486.1 154687325 5460087 complement(3048106..3048678) 1 NC_009725.1 hypothetical protein 3048678 5460087 RBAM_029240 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422486.1 3048106 R 326423 CDS YP_001422487.1 154687326 5461193 complement(3048937..3049476) 1 NC_009725.1 conserved hypothetical protein YjcK; hypothetical protein 3049476 yjcK 5461193 yjcK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422487.1 3048937 R 326423 CDS YP_001422488.1 154687327 5461194 3049853..3050614 1 NC_009725.1 lipoteichoic acid biosynthesis protein DltE; DltE 3050614 dltE 5461194 dltE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DltE YP_001422488.1 3049853 D 326423 CDS YP_001422489.1 154687328 5461195 complement(3050757..3051119) 1 NC_009725.1 conserved hypothetical protein YutM; hypothetical protein 3051119 yutM 5461195 yutM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422489.1 3050757 R 326423 CDS YP_001422490.1 154687329 5461196 complement(3051196..3052050) 1 NC_009725.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 3052050 dapF 5461196 dapF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 diaminopimelate epimerase YP_001422490.1 3051196 R 326423 CDS YP_001422491.1 154687330 5461197 complement(3052174..3053391) 1 NC_009725.1 Na+/nucleoside co-transporter YutK; hypothetical protein 3053391 yutK 5461197 yutK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422491.1 3052174 R 326423 CDS YP_001422492.1 154687331 5461198 complement(3053526..3053762) 1 NC_009725.1 hypothetical protein YuzB; hypothetical protein 3053762 yuzB 5461198 yuzB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422492.1 3053526 R 326423 CDS YP_001422493.1 154687332 5461199 3054029..3055096 1 NC_009725.1 NADH dehydrogenase YutJ; hypothetical protein 3055096 yutJ 5461199 yutJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422493.1 3054029 D 326423 CDS YP_001422494.1 154687333 5463040 complement(3055134..3055460) 1 NC_009725.1 conserved hypothetical protein YuzD; hypothetical protein 3055460 yuzD 5463040 yuzD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422494.1 3055134 R 326423 CDS YP_001422495.1 154687334 5463041 3055615..3055875 1 NC_009725.1 conserved hypothetical protein YutI; hypothetical protein 3055875 yutI 5463041 yutI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422495.1 3055615 D 326423 CDS YP_001422496.1 154687335 5463042 complement(3055916..3057892) 1 NC_009725.1 peptidase YuxL; hypothetical protein 3057892 yuxL 5463042 yuxL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422496.1 3055916 R 326423 CDS YP_001422497.1 154687336 5463043 complement(3057995..3058924) 1 NC_009725.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase 3058924 thrB 5463043 thrB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 homoserine kinase YP_001422497.1 3057995 R 326423 CDS YP_001422498.1 154687337 5463044 complement(3058921..3059979) 1 NC_009725.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 3059979 thrC 5463044 thrC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 threonine synthase YP_001422498.1 3058921 R 326423 CDS YP_001422499.1 154687338 5463045 complement(3059979..3061280) 1 NC_009725.1 catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 3061280 hom 5463045 hom Bacillus amyloliquefaciens subsp. plantarum str. FZB42 homoserine dehydrogenase YP_001422499.1 3059979 R 326423 CDS YP_001422500.1 154687339 5463046 complement(3061482..3062495) 1 NC_009725.1 hypothetical protein YutH; hypothetical protein 3062495 yutH 5463046 yutH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422500.1 3061482 R 326423 CDS YP_001422501.1 154687340 5462323 3062653..3063153 1 NC_009725.1 conserved hypothetical protein YutG; hypothetical protein 3063153 yutG 5462323 yutG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422501.1 3062653 D 326423 CDS YP_001422502.1 154687341 5462324 complement(3063181..3063951) 1 NC_009725.1 conserved hypothetical protein YutF; hypothetical protein 3063951 yutF 5462324 yutF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422502.1 3063181 R 326423 CDS YP_001422503.1 154687342 5462325 complement(3063985..3064419) 1 NC_009725.1 conserved hypothetical protein YutE; hypothetical protein 3064419 yutE 5462325 yutE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422503.1 3063985 R 326423 CDS YP_001422504.1 154687343 5462326 complement(3064445..3064753) 1 NC_009725.1 hypothetical protein YutD; hypothetical protein 3064753 yutD 5462326 yutD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422504.1 3064445 R 326423 CDS YP_001422505.1 154687344 5462327 complement(3064938..3065834) 1 NC_009725.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 3065834 lipA 5462327 lipA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 lipoyl synthase YP_001422505.1 3064938 R 326423 CDS YP_001422506.1 154687345 5462328 3066037..3067014 1 NC_009725.1 conserved hypothetical protein YunA; hypothetical protein 3067014 yunA 5462328 yunA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422506.1 3066037 D 326423 CDS YP_001422507.1 154687346 5462329 complement(3067052..3067810) 1 NC_009725.1 conserved hypothetical protein YunB; hypothetical protein 3067810 yunB 5462329 yunB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422507.1 3067052 R 326423 CDS YP_001422508.1 154687347 5462687 complement(3067937..3069331) 1 NC_009725.1 conserved hypothetical protein YunD; hypothetical protein 3069331 yunD 5462687 yunD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422508.1 3067937 R 326423 CDS YP_001422509.1 154687348 5462688 complement(3069349..3070170) 1 NC_009725.1 conserved hypothetical protein YunE; hypothetical protein 3070170 yunE 5462688 yunE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422509.1 3069349 R 326423 CDS YP_001422510.1 154687349 5462689 complement(3070190..3071041) 1 NC_009725.1 conserved hypothetical protein YunF; hypothetical protein 3071041 yunF 5462689 yunF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422510.1 3070190 R 326423 CDS YP_001422511.1 154687350 5462690 complement(3071068..3071421) 1 NC_009725.1 conserved hypothetical protein YunG; hypothetical protein 3071421 yunG 5462690 yunG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422511.1 3071068 R 326423 CDS YP_001422512.1 154687351 5462691 complement(3071495..3072859) 1 NC_009725.1 Plays a crucial role on both purine and pyrimidine metabolism; allantoinase 3072859 pucH 5462691 pucH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 allantoinase YP_001422512.1 3071495 R 326423 CDS YP_001422513.1 154687352 5462692 3073039..3074634 1 NC_009725.1 purine catabolism regulatory protein PucR; PucR 3074634 pucR 5462692 pucR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 PucR YP_001422513.1 3073039 D 326423 CDS YP_001422514.1 154687353 5462693 complement(3074825..3074980) 1 NC_009725.1 hypothetical protein 3074980 5462693 RBAM_029520 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422514.1 3074825 R 326423 CDS YP_001422515.1 154687354 5460045 complement(3075047..3075199) 1 NC_009725.1 hypothetical protein 3075199 5460045 RBAM_029530 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422515.1 3075047 R 326423 CDS YP_001422516.1 154687355 5460046 3075392..3075571 1 NC_009725.1 hypothetical protein 3075571 5460046 RBAM_029540 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422516.1 3075392 D 326423 CDS YP_001422517.1 154687356 5460047 complement(3075623..3076078) 1 NC_009725.1 hypothetical protein 3076078 5460047 RBAM_029550 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422517.1 3075623 R 326423 CDS YP_001422518.1 154687357 5460048 3076388..3076549 1 NC_009725.1 hypothetical protein 3076549 5460048 RBAM_029560 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422518.1 3076388 D 326423 CDS YP_001422519.1 154687358 5460049 complement(3076595..3077791) 1 NC_009725.1 multidrug resistance protein 3077791 5460049 RBAM_029570 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 multidrug resistance protein YP_001422519.1 3076595 R 326423 CDS YP_001422520.1 154687359 5460050 complement(3077913..3079166) 1 NC_009725.1 purine catabolism protein PucG; PucG 3079166 pucG 5460050 pucG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 PucG YP_001422520.1 3077913 R 326423 CDS YP_001422521.1 154687360 5460051 complement(3079185..3080426) 1 NC_009725.1 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase 3080426 pucF 5460051 pucF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 allantoate amidohydrolase YP_001422521.1 3079185 R 326423 CDS YP_001422522.1 154687361 5462263 3080626..3081495 1 NC_009725.1 extracellular ribonuclease precursor Bsn; Bsn 3081495 bsn 5462263 bsn Bacillus amyloliquefaciens subsp. plantarum str. FZB42 Bsn YP_001422522.1 3080626 D 326423 CDS YP_001422523.1 154687362 5462264 complement(3081545..3082651) 1 NC_009725.1 COG3839; multiple sugar ABC transporter (ATP-binding protein); hypothetical protein 3082651 yurJ 5462264 yurJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422523.1 3081545 R 326423 CDS YP_001422524.1 154687363 5462265 3082807..3083535 1 NC_009725.1 may act as a transcriptional regulator of a fructoselysine-induced operon containing the yhfM, yhfN, yhfO, yhfP, yhfQ, and yhfR genes; DNA-binding transcriptional regulator FrlR 3083535 yurK 5462265 yurK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DNA-binding transcriptional regulator FrlR YP_001422524.1 3082807 D 326423 CDS YP_001422525.1 154687364 5462266 complement(3083560..3084414) 1 NC_009725.1 cd01940; sugar kinase, fructose-lysine kinase like; possibly involved in opine biosynthesis; hypothetical protein 3084414 yurL 5462266 yurL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422525.1 3083560 R 326423 CDS YP_001422526.1 154687365 5462267 complement(3084428..3085312) 1 NC_009725.1 UgpE; sugar ABC transporter; inner membrane subunit; hypothetical protein 3085312 yurM 5462267 yurM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422526.1 3084428 R 326423 CDS YP_001422527.1 154687366 5462268 complement(3085316..3086206) 1 NC_009725.1 sugar ABC transporter, inner membrane subunit; hypothetical protein 3086206 yurN 5462268 yurN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422527.1 3085316 R 326423 CDS YP_001422528.1 154687367 5462269 complement(3086231..3087517) 1 NC_009725.1 ABC sugar transporter, periplasmic component; extracellular solute binding protein; hypothetical protein 3087517 yurO 5462269 yurO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422528.1 3086231 R 326423 CDS YP_001422529.1 154687368 5462589 complement(3087570..3088556) 1 NC_009725.1 glutamine-fructose-6-phosphate transaminase/ predicted phosphosugar isomerase; opine catabolism; hypothetical protein 3088556 yurP 5462589 yurP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422529.1 3087570 R 326423 CDS YP_001422530.1 154687369 5462590 3088753..3089679 1 NC_009725.1 HTH transcription regulator 3089679 5462590 RBAM_029680 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 HTH transcription regulator YP_001422530.1 3088753 D 326423 CDS YP_001422531.1 154687370 5462591 3090139..3090411 1 NC_009725.1 hypothetical protein YbgB; hypothetical protein 3090411 ybgB 5462591 ybgB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422531.1 3090139 D 326423 CDS YP_001422532.1 154687371 5462592 complement(3090450..3090824) 1 NC_009725.1 conserved hypothetical protein YurQ; hypothetical protein 3090824 yurQ 5462592 yurQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422532.1 3090450 R 326423 CDS YP_001422533.1 154687372 5462593 complement(3090890..3092005) 1 NC_009725.1 COG0665; glycine/D-amino acid oxidases (deaminating); possibly involved in opine biosynthesis; hypothetical protein 3092005 yurR 5462593 yurR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422533.1 3090890 R 326423 CDS YP_001422534.1 154687373 5462594 complement(3092043..3092762) 1 NC_009725.1 COG2226; possible methyltransferase in volved in opine biosynthesis; hypothetical protein 3092762 5462594 RBAM_029720 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422534.1 3092043 R 326423 CDS YP_001422535.1 154687374 5462595 3092822..3093283 1 NC_009725.1 hypothetical protein YncE; hypothetical protein 3093283 yncE 5462595 yncE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422535.1 3092822 D 326423 CDS YP_001422536.1 154687375 5459757 3093420..3094256 1 NC_009725.1 chitosanase; downregulated by plant exudate; hypothetical protein 3094256 csn 5459757 csn Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422536.1 3093420 D 326423 CDS YP_001422537.1 154687376 5459758 complement(3094291..3095688) 1 NC_009725.1 conserved hypothetical protein YurU; hypothetical protein 3095688 yurU 5459758 yurU Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422537.1 3094291 R 326423 CDS YP_001422538.1 154687377 5459759 complement(3095708..3096151) 1 NC_009725.1 iron-sulfur cofactor synthesis protein nifU homolog YurV; hypothetical protein 3096151 yurV 5459759 yurV Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422538.1 3095708 R 326423 CDS YP_001422539.1 154687378 5459760 complement(3096141..3097361) 1 NC_009725.1 cysteine desulfurase Csd; hypothetical protein 3097361 csd 5459760 csd Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422539.1 3096141 R 326423 CDS YP_001422540.1 154687379 5459761 complement(3097361..3098674) 1 NC_009725.1 conserved hypothetical protein YurX; hypothetical protein 3098674 yurX 5459761 yurX Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422540.1 3097361 R 326423 CDS YP_001422541.1 154687380 5459762 complement(3098692..3099477) 1 NC_009725.1 ABC transporter (ATP-binding protein) YurY; hypothetical protein 3099477 yurY 5459762 yurY Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422541.1 3098692 R 326423 CDS YP_001422542.1 154687381 5459763 complement(3099999..3100370) 1 NC_009725.1 conserved hypothetical protein YurZ; hypothetical protein 3100370 yurZ 5459763 yurZ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422542.1 3099999 R 326423 CDS YP_001422543.1 154687382 5461326 complement(3100470..3101285) 1 NC_009725.1 conserved hypothetical protein YusA; hypothetical protein 3101285 yusA 5461326 yusA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422543.1 3100470 R 326423 CDS YP_001422544.1 154687383 5461327 complement(3101299..3101967) 1 NC_009725.1 ABC transporter (permease) YusB; hypothetical protein 3101967 yusB 5461327 yusB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422544.1 3101299 R 326423 CDS YP_001422545.1 154687384 5461328 complement(3101960..3102985) 1 NC_009725.1 ABC transporter (ATP-binding protein) YusC; hypothetical protein 3102985 yusC 5461328 yusC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422545.1 3101960 R 326423 CDS YP_001422546.1 154687385 5461329 complement(3103308..3103658) 1 NC_009725.1 hypothetical protein YusD; hypothetical protein 3103658 yusD 5461329 yusD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422546.1 3103308 R 326423 CDS YP_001422547.1 154687386 5461330 complement(3103755..3104075) 1 NC_009725.1 conserved hypothetical protein YusE; hypothetical protein 3104075 yusE 5461330 yusE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422547.1 3103755 R 326423 CDS YP_001422548.1 154687387 5461331 complement(3104078..3104509) 1 NC_009725.1 conserved hypothetical protein YusF; hypothetical protein 3104509 yusF 5461331 yusF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422548.1 3104078 R 326423 CDS YP_001422549.1 154687388 5461332 complement(3104513..3104749) 1 NC_009725.1 hypothetical protein YusG; hypothetical protein 3104749 yusG 5461332 yusG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422549.1 3104513 R 326423 CDS YP_001422550.1 154687389 5462968 complement(3104804..3105187) 1 NC_009725.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H 3105187 gcvH 5462968 gcvH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 glycine cleavage system protein H YP_001422550.1 3104804 R 326423 CDS YP_001422551.1 154687390 5462969 complement(3105247..3105603) 1 NC_009725.1 conserved hypothetical protein YusI; hypothetical protein 3105603 yusI 5462969 yusI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422551.1 3105247 R 326423 CDS YP_001422552.1 154687391 5462970 complement(3105717..3107501) 1 NC_009725.1 Acyl-CoA dehydrogenase YusJ; hypothetical protein 3107501 yusJ 5462970 yusJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422552.1 3105717 R 326423 CDS YP_001422553.1 154687392 5462971 complement(3107520..3108695) 1 NC_009725.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 3108695 yusK 5462971 yusK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 acetyl-CoA acetyltransferase YP_001422553.1 3107520 R 326423 CDS YP_001422554.1 154687393 5462972 complement(3108706..3111075) 1 NC_009725.1 3-hydroxyacyl-CoA dehydrogenase YusL; hypothetical protein 3111075 yusL 5462972 yusL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422554.1 3108706 R 326423 CDS YP_001422555.1 154687394 5462973 3111266..3111406 1 NC_009725.1 hypothetical protein 3111406 5462973 RBAM_029930 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422555.1 3111266 D 326423 CDS YP_001422556.1 154687395 5462974 complement(3111436..3112344) 1 NC_009725.1 proline dehydrogenase YusM; hypothetical protein 3112344 yusM 5462974 yusM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422556.1 3111436 R 326423 CDS YP_001422557.1 154687396 5461253 3112434..3112691 1 NC_009725.1 hypothetical protein 3112691 5461253 RBAM_029950 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422557.1 3112434 D 326423 CDS YP_001422558.1 154687397 5461254 3112703..3113035 1 NC_009725.1 hypothetical protein YusN; hypothetical protein 3113035 yusN 5461254 yusN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422558.1 3112703 D 326423 CDS YP_001422559.1 154687398 5461255 3113174..3113665 1 NC_009725.1 transcriptional regulator, MarR family YusO; hypothetical protein 3113665 yusO 5461255 yusO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422559.1 3113174 D 326423 CDS YP_001422560.1 154687399 5461256 3113655..3115250 1 NC_009725.1 multidrug-efflux transporter YusP; hypothetical protein 3115250 yusP 5461256 yusP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422560.1 3113655 D 326423 CDS YP_001422561.1 154687400 5461257 complement(3115285..3115668) 1 NC_009725.1 conserved hypothetical protein YusQ; hypothetical protein 3115668 yusQ 5461257 yusQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422561.1 3115285 R 326423 CDS YP_001422562.1 154687401 5461258 complement(3115684..3116424) 1 NC_009725.1 conserved hypothetical protein YusR; hypothetical protein 3116424 yusR 5461258 yusR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422562.1 3115684 R 326423 CDS YP_001422563.1 154687402 5461259 3116557..3117432 1 NC_009725.1 HTH-type transcriptional regulator YusT; hypothetical protein 3117432 yusT 5461259 yusT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422563.1 3116557 D 326423 CDS YP_001422564.1 154687403 5461236 complement(3117928..3118815) 1 NC_009725.1 LysR family transcriptional regulator 3118815 5461236 RBAM_030020 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 LysR family transcriptional regulator YP_001422564.1 3117928 R 326423 CDS YP_001422565.1 154687404 5461237 3118936..3119682 1 NC_009725.1 converts acetoacetate to acetone and carbon dioxide; acetoacetate decarboxylase 3119682 5461237 RBAM_030030 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 acetoacetate decarboxylase YP_001422565.1 3118936 D 326423 CDS YP_001422566.1 154687405 5461238 3119696..3120736 1 NC_009725.1 hypothetical protein 3120736 5461238 RBAM_030040 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422566.1 3119696 D 326423 CDS YP_001422567.1 154687406 5461239 complement(3120929..3121174) 1 NC_009725.1 hypothetical protein YusU; hypothetical protein 3121174 yusU 5461239 yusU Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422567.1 3120929 R 326423 CDS YP_001422568.1 154687407 5461240 complement(3121199..3122023) 1 NC_009725.1 iron(III) ABC transport ATPase component; hypothetical protein 3122023 yusV 5461240 yusV Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422568.1 3121199 R 326423 CDS YP_001422569.1 154687408 5461241 complement(3122179..3122616) 1 NC_009725.1 hypothetical protein YusW; hypothetical protein 3122616 yusW 5461241 yusW Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422569.1 3122179 R 326423 CDS YP_001422570.1 154687409 5461242 complement(3122735..3124516) 1 NC_009725.1 oligoendopeptidase YusX; hypothetical protein 3124516 yusX 5461242 yusX Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422570.1 3122735 R 326423 CDS YP_001422571.1 154687410 5461156 3124647..3125489 1 NC_009725.1 oxidoreductase YusZ; short chain dehydrogenase 3125489 yusZ 5461156 yusZ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 short chain dehydrogenase YP_001422571.1 3124647 D 326423 CDS YP_001422572.1 154687411 5461157 3125573..3126043 1 NC_009725.1 metalloregulation DNA-binding stress protein MrgA; MrgA 3126043 mrgA 5461157 mrgA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 MrgA YP_001422572.1 3125573 D 326423 CDS YP_001422573.1 154687412 5461158 complement(3126090..3127451) 1 NC_009725.1 serine protease YvtA; hypothetical protein 3127451 yvtA 5461158 yvtA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422573.1 3126090 R 326423 CDS YP_001422574.1 154687413 5461159 3127728..3128405 1 NC_009725.1 two-component reponse regulator; COG0745, OmpR like RR consisting of a CheY-like receiver domain and a winged helix DNA-binding domain; required to control the cellular response to secretion stress; hypothetical protein 3128405 cssR 5461159 cssR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422574.1 3127728 D 326423 CDS YP_001422575.1 154687414 5461160 3128402..3129757 1 NC_009725.1 two-component sensor histidine kinase; COG0642, BaeS like HK; required to control the cellular response to secretion stress; hypothetical protein 3129757 cssS 5461160 cssS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422575.1 3128402 D 326423 CDS YP_001422576.1 154687415 5461161 complement(3129784..3129948) 1 NC_009725.1 hypothetical protein YirB; hypothetical protein 3129948 yirB 5461161 yirB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422576.1 3129784 R 326423 CDS YP_001422577.1 154687416 5461162 3130127..3131002 1 NC_009725.1 HTH-type transcriptional regulator YuxN; hypothetical protein 3131002 yuxN 5461162 yuxN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422577.1 3130127 D 326423 CDS YP_001422578.1 154687417 5460350 complement(3131039..3132427) 1 NC_009725.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 3132427 fumC 5460350 fumC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 fumarate hydratase YP_001422578.1 3131039 R 326423 CDS YP_001422579.1 154687418 5460351 complement(3132495..3132680) 1 NC_009725.1 hypothetical protein 3132680 5460351 RBAM_030170 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422579.1 3132495 R 326423 CDS YP_001422580.1 154687419 5460352 3132797..3134239 1 NC_009725.1 spore germination protein A1 (GerAA); GerAA 3134239 gerAA 5460352 gerAA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GerAA YP_001422580.1 3132797 D 326423 CDS YP_001422581.1 154687420 5460353 3134214..3135314 1 NC_009725.1 spore germination protein A2 (GerAB); GerAB 3135314 gerAB 5460353 gerAB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GerAB YP_001422581.1 3134214 D 326423 CDS YP_001422582.1 154687421 5460354 3135311..3136423 1 NC_009725.1 spore germination protein A3 (GerAC); GerAC 3136423 gerAC 5460354 gerAC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GerAC YP_001422582.1 3135311 D 326423 CDS YP_001422583.1 154687422 5460355 complement(3136465..3137097) 1 NC_009725.1 two-component response regulator; COG2197, CitB like RR containing a CheY-like receiver domain and a HTH DNA-binding domain [signal transduction two component system]; hypothetical protein 3137097 yvqC 5460355 yvqC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422583.1 3136465 R 326423 CDS YP_001422584.1 154687423 5460356 complement(3137075..3138157) 1 NC_009725.1 two-component protein histidine kinase; COG4585; signal transduction two component system; hypothetical protein 3138157 yvqE 5460356 yvqE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422584.1 3137075 R 326423 CDS YP_001422585.1 154687424 5462106 complement(3138154..3138885) 1 NC_009725.1 conserved hypothetical protein YvqF; hypothetical protein 3138885 yvqF 5462106 yvqF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422585.1 3138154 R 326423 CDS YP_001422586.1 154687425 5462107 complement(3138912..3139781) 1 NC_009725.1 hypothetical protein YvqG; hypothetical protein 3139781 yvqG 5462107 yvqG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422586.1 3138912 R 326423 CDS YP_001422587.1 154687426 5462108 complement(3139887..3140564) 1 NC_009725.1 conserved hypothetical protein YvqH; hypothetical protein 3140564 yvqH 5462108 yvqH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422587.1 3139887 R 326423 CDS YP_001422588.1 154687427 5462109 complement(3140578..3140958) 1 NC_009725.1 hypothetical protein YvqI; hypothetical protein 3140958 yvqI 5462109 yvqI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422588.1 3140578 R 326423 CDS YP_001422589.1 154687428 5462110 complement(3141125..3142393) 1 NC_009725.1 conserved hypothetical protein YvqJ; hypothetical protein 3142393 yvqJ 5462110 yvqJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422589.1 3141125 R 326423 CDS YP_001422590.1 154687429 5462111 complement(3142558..3143163) 1 NC_009725.1 conserved hypothetical protein YvqK; hypothetical protein 3143163 yvqK 5462111 yvqK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422590.1 3142558 R 326423 CDS YP_001422591.1 154687430 5462112 complement(3143124..3144350) 1 NC_009725.1 ABC transport system ATP-binding protein YvrA; hypothetical protein 3144350 yvrA 5462112 yvrA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422591.1 3143124 R 326423 CDS YP_001422592.1 154687431 5461515 complement(3144347..3145393) 1 NC_009725.1 iron permease YvrB; hypothetical protein 3145393 yvrB 5461515 yvrB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422592.1 3144347 R 326423 CDS YP_001422593.1 154687432 5461516 complement(3145356..3146300) 1 NC_009725.1 iron-binding protein; hypothetical protein 3146300 yvrC 5461516 yvrC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422593.1 3145356 R 326423 CDS YP_001422594.1 154687433 5461517 3146488..3147279 1 NC_009725.1 3-oxoacyl-[acyl-carrier-protein] reductase YvrD; hypothetical protein 3147279 yvrD 5461517 yvrD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422594.1 3146488 D 326423 CDS YP_001422595.1 154687434 5461518 complement(3147331..3148209) 1 NC_009725.1 conserved hypothetical protein YvrE; hypothetical protein 3148209 yvrE 5461518 yvrE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422595.1 3147331 R 326423 CDS YP_001422596.1 154687435 5461519 complement(3148273..3150015) 1 NC_009725.1 two-component sensor histidine kinase; COG0642, signal transduction; hypothetical protein 3150015 yvrG1 5461519 yvrG1 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422596.1 3148273 R 326423 CDS YP_001422597.1 154687436 5461520 complement(3150012..3150731) 1 NC_009725.1 two-component response regulator; COG0745; OmpR like family; RR containing a CheY-like receiver domain and a winged-helix DNA binding domain; C-terminus similar YvrH; hypothetical protein 3150731 yvrH1 5461520 yvrH1 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422597.1 3150012 R 326423 CDS YP_001422598.1 154687437 5461521 complement(3150904..3151140) 1 NC_009725.1 hypothetical protein YvrH2; hypothetical protein 3151140 yvrH2 5461521 yvrH2 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422598.1 3150904 R 326423 CDS YP_001422599.1 154687438 5460555 complement(3151137..3151715) 1 NC_009725.1 conserved hypothetical protein YvrI; hypothetical protein 3151715 yvrI 5460555 yvrI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422599.1 3151137 R 326423 CDS YP_001422600.1 154687439 5460556 3151916..3152071 1 NC_009725.1 hypothetical protein 3152071 5460556 RBAM_030380 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422600.1 3151916 D 326423 CDS YP_001422601.1 154687440 5460557 3152189..3153349 1 NC_009725.1 oxalate decarboxylase OxdC; OxdC 3153349 oxdC 5460557 oxdC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 OxdC YP_001422601.1 3152189 D 326423 CDS YP_001422602.1 154687441 5460558 3153419..3153841 1 NC_009725.1 hypothetical protein YvrL; hypothetical protein 3153841 yvrL 5460558 yvrL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422602.1 3153419 D 326423 CDS YP_001422603.1 154687442 5460559 complement(3153880..3154683) 1 NC_009725.1 ferrichrome ABC transporter (ATP-binding protein) FhuC; FhuC 3154683 fhuC 5460559 fhuC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 FhuC YP_001422603.1 3153880 R 326423 CDS YP_001422604.1 154687443 5460560 complement(3154702..3155712) 1 NC_009725.1 ferrichrome ABC transporter (permease) FhuG; FhuG 3155712 fhuG 5460560 fhuG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 FhuG YP_001422604.1 3154702 R 326423 CDS YP_001422605.1 154687444 5460561 complement(3155712..3156779) 1 NC_009725.1 ferrichrome ABC transporter (permease) FhuB; FhuB 3156779 fhuB 5460561 fhuB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 FhuB YP_001422605.1 3155712 R 326423 CDS YP_001422606.1 154687445 5461266 3156997..3157935 1 NC_009725.1 ferrichrome ABC transporter (ferrichrome binding protein) FhuD; FhuD 3157935 fhuD 5461266 fhuD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 FhuD YP_001422606.1 3156997 D 326423 CDS YP_001422607.1 154687446 5461267 complement(3158093..3159505) 1 NC_009725.1 conserved hypothetical protein YvsH; hypothetical protein 3159505 yvsH 5461267 yvsH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422607.1 3158093 R 326423 CDS YP_001422608.1 154687447 5461268 complement(3159918..3160058) 1 NC_009725.1 small acid-soluble spore protein SspJ; SspJ 3160058 sspJ 5461268 sspJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SspJ YP_001422608.1 3159918 R 326423 CDS YP_001422609.1 154687448 5461269 3160242..3160724 1 NC_009725.1 conserved hypothetical protein YvsG; hypothetical protein 3160724 yvsG 5461269 yvsG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422609.1 3160242 D 326423 CDS YP_001422610.1 154687449 5461270 3160766..3162622 1 NC_009725.1 conserved hypothetical protein YvgJ; hypothetical protein 3162622 yvgJ 5461270 yvgJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422610.1 3160766 D 326423 CDS YP_001422611.1 154687450 5461271 complement(3162653..3163579) 1 NC_009725.1 molybdenum-binding protein YvgK; hypothetical protein 3163579 yvgK 5461271 yvgK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422611.1 3162653 R 326423 CDS YP_001422612.1 154687451 5461272 3163697..3164494 1 NC_009725.1 molybdate-binding protein YvgL; hypothetical protein 3164494 yvgL 5461272 yvgL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422612.1 3163697 D 326423 CDS YP_001422613.1 154687452 5460114 3164598..3165158 1 NC_009725.1 molybdenum transport permease YvgM; hypothetical protein 3165158 yvgM 5460114 yvgM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422613.1 3164598 D 326423 CDS YP_001422614.1 154687453 5460115 3165253..3165900 1 NC_009725.1 COG2197, CitB like RR containing a CheY-like receiver domain and an HTH-binding domain; two-component response regulator 3165900 5460115 RBAM_030520 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 two-component response regulator YP_001422614.1 3165253 D 326423 CDS YP_001422615.1 154687454 5460116 3165897..3167009 1 NC_009725.1 COG4585, two component signal transduction mechanism; two-component sensor histidine kinase 3167009 5460116 RBAM_030530 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 two-component sensor histidine kinase YP_001422615.1 3165897 D 326423 CDS YP_001422616.1 154687455 5460117 3167129..3168064 1 NC_009725.1 multidrug ABC transporter, ATPase component 3168064 5460117 RBAM_030540 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 multidrug ABC transporter, ATPase component YP_001422616.1 3167129 D 326423 CDS YP_001422617.1 154687456 5460118 3168088..3169182 1 NC_009725.1 multidrug ABC transporter, permease 3169182 5460118 RBAM_030550 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 multidrug ABC transporter, permease YP_001422617.1 3168088 D 326423 CDS YP_001422618.1 154687457 5460119 3169184..3170329 1 NC_009725.1 multidrug ABC transporter, permease 3170329 5460119 RBAM_030560 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 multidrug ABC transporter, permease YP_001422618.1 3169184 D 326423 CDS YP_001422619.1 154687458 5460120 complement(3170363..3171193) 1 NC_009725.1 dehydrogenase YvgN; hypothetical protein 3171193 yvgN 5460120 yvgN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422619.1 3170363 R 326423 CDS YP_001422620.1 154687459 5460769 3171415..3171900 1 NC_009725.1 stress response protein precursor YvgO; hypothetical protein 3171900 yvgO 5460769 yvgO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422620.1 3171415 D 326423 CDS YP_001422621.1 154687460 5460770 complement(3171940..3173955) 1 NC_009725.1 conserved hypothetical protein YvgP; hypothetical protein 3173955 yvgP 5460770 yvgP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422621.1 3171940 R 326423 CDS YP_001422622.1 154687461 5460771 complement(3174304..3176019) 1 NC_009725.1 hemoprotein; NADPH dependent; with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide; sulfite reductase subunit beta 3176019 yvgQ 5460771 yvgQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 sulfite reductase subunit beta YP_001422622.1 3174304 R 326423 CDS YP_001422623.1 154687462 5460772 complement(3176047..3177855) 1 NC_009725.1 sulfite reductase (NADPH2) flavoprotein YvgR; hypothetical protein 3177855 yvgR 5460772 yvgR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422623.1 3176047 R 326423 CDS YP_001422624.1 154687463 5460773 complement(3178030..3180345) 1 NC_009725.1 conserved hypothetical protein YvgS; hypothetical protein 3180345 yvgS 5460773 yvgS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422624.1 3178030 R 326423 CDS YP_001422625.1 154687464 5460774 complement(3180537..3181145) 1 NC_009725.1 conserved hypothetical protein YvgT; hypothetical protein 3181145 yvgT 5460774 yvgT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422625.1 3180537 R 326423 CDS YP_001422626.1 154687465 5460775 3181368..3182168 1 NC_009725.1 hypothetical protein 3182168 5460775 RBAM_030640 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422626.1 3181368 D 326423 CDS YP_001422627.1 154687466 5460464 complement(3182202..3182621) 1 NC_009725.1 disulfide bond formation protein C (BdbC); BdbC 3182621 bdbC 5460464 bdbC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 BdbC YP_001422627.1 3182202 R 326423 CDS YP_001422628.1 154687467 5460465 complement(3182611..3183282) 1 NC_009725.1 disulfide bond formation protein D precursor BdbD; BdbD 3183282 bdbD 5460465 bdbD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 BdbD YP_001422628.1 3182611 R 326423 CDS YP_001422629.1 154687468 5460466 complement(3183400..3185511) 1 NC_009725.1 metal ABC-transporter, ATPase component YvgW; hypothetical protein 3185511 yvgW 5460466 yvgW Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422629.1 3183400 R 326423 CDS YP_001422630.1 154687469 5460467 complement(3185661..3188099) 1 NC_009725.1 copper-transporting P-type ATPase CopA; CopA 3188099 copA 5460467 copA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 CopA YP_001422630.1 3185661 R 326423 CDS YP_001422631.1 154687470 5460468 complement(3188174..3188395) 1 NC_009725.1 copper chaperone CopZ; hypothetical protein 3188395 copZ 5460468 copZ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422631.1 3188174 R 326423 CDS YP_001422632.1 154687471 5460469 complement(3188456..3188761) 1 NC_009725.1 conserved hypothetical protein YvgZ; hypothetical protein 3188761 yvgZ 5460469 yvgZ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422632.1 3188456 R 326423 CDS YP_001422633.1 154687472 5460470 3188900..3189940 1 NC_009725.1 oxidoreductase YvaA; hypothetical protein 3189940 yvaA 5460470 yvaA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422633.1 3188900 D 326423 CDS YP_001422634.1 154687473 5462856 complement(3189985..3190620) 1 NC_009725.1 FMN-dependent; requires NADH; catalyzes the cleavage of azo bond in aromatic azo compounds; azoreductase 3190620 yvaB 5462856 yvaB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 azoreductase YP_001422634.1 3189985 R 326423 CDS YP_001422635.1 154687474 5462857 complement(3190975..3191826) 1 NC_009725.1 hypothetical protein 3191826 5462857 RBAM_030730 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422635.1 3190975 R 326423 CDS YP_001422636.1 154687475 5462858 3191930..3193147 1 NC_009725.1 hypothetical protein 3193147 5462858 RBAM_030740 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422636.1 3191930 D 326423 CDS YP_001422637.1 154687476 5462859 3193147..3193563 1 NC_009725.1 hypothetical protein 3193563 5462859 RBAM_030750 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422637.1 3193147 D 326423 CDS YP_001422638.1 154687477 5462860 3193567..3194352 1 NC_009725.1 hypothetical protein 3194352 5462860 RBAM_030760 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422638.1 3193567 D 326423 CDS YP_001422639.1 154687478 5462861 complement(3194554..3195882) 1 NC_009725.1 nitrilotriacetate monooxygenase component A (YtnJ); hypothetical protein 3195882 ytnJ 5462861 ytnJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422639.1 3194554 R 326423 CDS YP_001422640.1 154687479 5462862 complement(3195879..3196166) 1 NC_009725.1 conserved hypothetical protein YtnI; hypothetical protein 3196166 ytnI 5462862 ytnI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422640.1 3195879 R 326423 CDS YP_001422641.1 154687480 5461163 complement(3196178..3197185) 1 NC_009725.1 conserved hypothetical protein YtmO; hypothetical protein 3197185 ytmO 5461163 ytmO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422641.1 3196178 R 326423 CDS YP_001422642.1 154687481 5461164 complement(3197182..3197961) 1 NC_009725.1 amino-acid ABC transporter ATP-binding protein;possibly involved in opine transport; hypothetical protein 3197961 ytmN 5461164 ytmN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422642.1 3197182 R 326423 CDS YP_001422643.1 154687482 5461165 complement(3197958..3198665) 1 NC_009725.1 amino-acid ABC transporter permease protein; possibly involved in octopin transport; hypothetical protein 3198665 ytmM 5461165 ytmM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422643.1 3197958 R 326423 CDS YP_001422644.1 154687483 5461166 complement(3198681..3199403) 1 NC_009725.1 amino acid ABC transporter (permease) homolog; possibly involved in octopine transport; hypothetical protein 3199403 ytmL 5461166 ytmL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422644.1 3198681 R 326423 CDS YP_001422645.1 154687484 5461167 complement(3199426..3200238) 1 NC_009725.1 amino-acid ABC transporter (periplasmic binding protein); possibly involved in opine transport; hypothetical protein 3200238 ytmK 5461167 ytmK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422645.1 3199426 R 326423 CDS YP_001422646.1 154687485 5461168 complement(3200264..3200980) 1 NC_009725.1 amino acid ABC transporter (periplasmic binding protein); possibly involved in opine transport; hypothetical protein 3200980 ytmJ 5461168 ytmJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422646.1 3200264 R 326423 CDS YP_001422647.1 154687486 5461169 complement(3201073..3201612) 1 NC_009725.1 conserved hypothetical protein YtmI; hypothetical protein 3201612 ytmI 5461169 ytmI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422647.1 3201073 R 326423 CDS YP_001422648.1 154687487 5460244 3201740..3202645 1 NC_009725.1 transcription regulator LysR family YtlI; hypothetical protein 3202645 ytlI 5460244 ytlI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422648.1 3201740 D 326423 CDS YP_001422649.1 154687488 5460245 complement(3202697..3203494) 1 NC_009725.1 conservative hypothetical protein YvaG; hypothetical protein 3203494 yvaG 5460245 yvaG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422649.1 3202697 R 326423 CDS YP_001422650.1 154687489 5460246 complement(3203606..3203911) 1 NC_009725.1 ribonuclease inhibitor YrdF; hypothetical protein 3203911 yrdF 5460246 yrdF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422650.1 3203606 R 326423 CDS YP_001422651.1 154687490 5460247 complement(3204517..3204987) 1 NC_009725.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 3204987 smpB 5460247 smpB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SsrA-binding protein YP_001422651.1 3204517 R 326423 CDS YP_001422652.1 154687491 5460248 complement(3205127..3207460) 1 NC_009725.1 ribonuclease R (3'-5'exoribonuclease) Rnr; ribonuclease R 3207460 rnr 5460248 rnr Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ribonuclease R YP_001422652.1 3205127 R 326423 CDS YP_001422653.1 154687492 5460249 complement(3207479..3208219) 1 NC_009725.1 carboxylesterase YvaK; hypothetical protein 3208219 yvaK 5460249 yvaK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422653.1 3207479 R 326423 CDS YP_001422654.1 154687493 5460250 complement(3208338..3208568) 1 NC_009725.1 preprotein translocase subunit SecG 3208568 secG 5460250 secG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 preprotein translocase subunit SecG YP_001422654.1 3208338 R 326423 CDS YP_001422655.1 154687494 5462994 complement(3208692..3208922) 1 NC_009725.1 conserved hypothetical protein YvzC; hypothetical protein 3208922 yvzC 5462994 yvzC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422655.1 3208692 R 326423 CDS YP_001422656.1 154687495 5462995 3209073..3209483 1 NC_009725.1 conserved hypothetical protein YvaN; hypothetical protein 3209483 yvaN 5462995 yvaN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422656.1 3209073 D 326423 CDS YP_001422657.1 154687496 5462996 3209508..3209939 1 NC_009725.1 conserved hypothetical protein YvaO; hypothetical protein 3209939 yvaO 5462996 yvaO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422657.1 3209508 D 326423 CDS YP_001422658.1 154687497 5462997 3210021..3210338 1 NC_009725.1 conserved hypothetical protein YvaP; hypothetical protein 3210338 yvaP 5462997 yvaP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422658.1 3210021 D 326423 CDS YP_001422659.1 154687498 5462998 complement(3210423..3211826) 1 NC_009725.1 subtilin biosynthesis sensor histidine kinase; smart00387; involved in the regulation of biosynthesis of lantibiotic subtilin; SpaK 3211826 spaK 5462998 spaK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SpaK YP_001422659.1 3210423 R 326423 CDS YP_001422660.1 154687499 5462999 complement(3211817..3212479) 1 NC_009725.1 two-component response regulator; COG0745, OmpR-like RR consisting of a CheY-like receiver domain and a winged helix-DNA-binding domain; involved in regulation of synthesis of lantibiotic subtilin; SpaR 3212479 spaR 5462999 spaR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SpaR YP_001422660.1 3211817 R 326423 CDS YP_001422661.1 154687500 5463000 complement(3212501..3213271) 1 NC_009725.1 lantibiotic ABC transporter permease SpaG; SpaG 3213271 spaG 5463000 spaG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SpaG YP_001422661.1 3212501 R 326423 CDS YP_001422662.1 154687501 5462726 complement(3213268..3214002) 1 NC_009725.1 lantibiotic ABC transporter permease SpaE; SpaE 3214002 spaE 5462726 spaE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SpaE YP_001422662.1 3213268 R 326423 CDS YP_001422663.1 154687502 5462727 complement(3213999..3214712) 1 NC_009725.1 lantibiotic transporter (ATP-binding protein) SpaF; SpaF 3214712 spaF 5462727 spaF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SpaF YP_001422663.1 3213999 R 326423 CDS YP_001422664.1 154687503 5462728 complement(3214823..3215500) 1 NC_009725.1 choline transport system permease protein OpuBD; OpuBD 3215500 opuBD 5462728 opuBD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 OpuBD YP_001422664.1 3214823 R 326423 CDS YP_001422665.1 154687504 5462729 complement(3215519..3216436) 1 NC_009725.1 choline ABC transporter (choline-binding protein) OpuBC; OpuBC 3216436 opuBC 5462729 opuBC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 OpuBC YP_001422665.1 3215519 R 326423 CDS YP_001422666.1 154687505 5462730 complement(3216451..3217104) 1 NC_009725.1 choline ABC transporter (membrane protein) OpuBB; OpuBB 3217104 opuBB 5462730 opuBB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 OpuBB YP_001422666.1 3216451 R 326423 CDS YP_001422667.1 154687506 5462731 complement(3217121..3218266) 1 NC_009725.1 choline ABC transporter (ATP-binding protein) OpuBA; opuBA 3218266 opuBA 5462731 opuBA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 opuBA YP_001422667.1 3217121 R 326423 CDS YP_001422668.1 154687507 5462732 3218552..3219085 1 NC_009725.1 conserved hypothetical protein YvaV; hypothetical protein 3219085 yvaV 5462732 yvaV Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422668.1 3218552 D 326423 CDS YP_001422669.1 154687508 5462021 complement(3219121..3219795) 1 NC_009725.1 glycine betaine/carnitine/choline ABC transporter (permease protein) OpuCD; binding-protein-dependent transport system inner membrane protein OpuCD 3219795 opuCD 5462021 opuCD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 binding-protein-dependent transport system inner membrane protein OpuCD YP_001422669.1 3219121 R 326423 CDS YP_001422670.1 154687509 5462022 complement(3219813..3220730) 1 NC_009725.1 glycine betaine/carnitine/choline ABC transporter (osmoprotectant-binding protein) OpuCC; periplasmic transport protein OpuCC 3220730 opuCC 5462022 opuCC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 periplasmic transport protein OpuCC YP_001422670.1 3219813 R 326423 CDS YP_001422671.1 154687510 5462023 complement(3220744..3221397) 1 NC_009725.1 glycine betaine/carnitine/choline ABC transporter (permease protein) OpuCB; OpuCB 3221397 opuCB 5462023 opuCB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 OpuCB YP_001422671.1 3220744 R 326423 CDS YP_001422672.1 154687511 5462024 complement(3221418..3222557) 1 NC_009725.1 glycine betaine/carnitine/choline ABC transporter (ATP-binding protein) OpuCA; opuCA 3222557 opuCA 5462024 opuCA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 opuCA YP_001422672.1 3221418 R 326423 CDS YP_001422673.1 154687512 5462025 3222818..3223375 1 NC_009725.1 conserved hypothetical protein YvbF; hypothetical protein 3223375 yvbF 5462025 yvbF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422673.1 3222818 D 326423 CDS YP_001422674.1 154687513 5462026 complement(3223396..3224028) 1 NC_009725.1 conserved hypothetical protein YvbG; hypothetical protein 3224028 yvbG 5462026 yvbG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422674.1 3223396 R 326423 CDS YP_001422675.1 154687514 5462027 3224467..3225177 1 NC_009725.1 hypothetical protein YvbI; hypothetical protein 3225177 yvbI 5462027 yvbI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422675.1 3224467 D 326423 CDS YP_001422676.1 154687515 5462981 complement(3225218..3227008) 1 NC_009725.1 conserved hypothetical protein YvbJ; hypothetical protein 3227008 yvbJ 5462981 yvbJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422676.1 3225218 R 326423 CDS YP_001422677.1 154687516 5462982 3227140..3227601 1 NC_009725.1 conserved hypothetical protein YvbK; hypothetical protein 3227601 yvbK 5462982 yvbK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422677.1 3227140 D 326423 CDS YP_001422678.1 154687517 5462983 complement(3227645..3228853) 1 NC_009725.1 probably involved in polysaccharide biosynthesis and elicitation of plant basal defence; hypothetical protein 3228853 5462983 RBAM_031160 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422678.1 3227645 R 326423 CDS YP_001422679.1 154687518 5462984 complement(3228855..3229775) 1 NC_009725.1 probably involved in polysaccharide biosynthesis and elicitation of plant basal defence; hypothetical protein 3229775 5462984 RBAM_031170 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422679.1 3228855 R 326423 CDS YP_001422680.1 154687519 5462985 complement(3229783..3230463) 1 NC_009725.1 probably involved in polysaccharide biosynthesis and elicitation of plant basal defence; hypothetical protein 3230463 5462985 RBAM_031180 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422680.1 3229783 R 326423 CDS YP_001422681.1 154687520 5462986 complement(3230423..3231181) 1 NC_009725.1 probably involved in polysaccharide biosynthesis and elicitation of plant basal defence; hypothetical protein 3231181 5462986 RBAM_031190 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422681.1 3230423 R 326423 CDS YP_001422682.1 154687521 5462987 complement(3231154..3231936) 1 NC_009725.1 probably involved in polysaccharide biosynthesis and elicitation of plant basal defence; hypothetical protein 3231936 5462987 RBAM_031200 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422682.1 3231154 R 326423 CDS YP_001422683.1 154687522 5462316 complement(3232047..3233303) 1 NC_009725.1 probably involved in polysaccharide biosynthesis and elicitation of plant basal defence; hypothetical protein 3233303 5462316 RBAM_031210 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422683.1 3232047 R 326423 CDS YP_001422684.1 154687523 5462317 complement(3233269..3234198) 1 NC_009725.1 probably involved in polysaccharide biosynthesis and elicitation of plant basal defence; hypothetical protein 3234198 5462317 RBAM_031220 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422684.1 3233269 R 326423 CDS YP_001422685.1 154687524 5462318 complement(3234195..3235325) 1 NC_009725.1 spore coat polysaccharide biosynthesis protein; probably involved in polysaccharide biosynthesis and elicitation of plant basal defence; SpsC1 3235325 spsC1 5462318 spsC1 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SpsC1 YP_001422685.1 3234195 R 326423 CDS YP_001422686.1 154687525 5462319 complement(3235374..3236708) 1 NC_009725.1 probably involved in polysaccharide biosynthesis and elicitation of plant basal defence; hypothetical protein 3236708 5462319 RBAM_031240 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422686.1 3235374 R 326423 CDS YP_001422687.1 154687526 5462320 complement(3236974..3238278) 1 NC_009725.1 peptidase; hypothetical protein 3238278 ywaD 5462320 ywaD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422687.1 3236974 R 326423 CDS YP_001422688.1 154687527 5462321 complement(3238423..3239715) 1 NC_009725.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 3239715 eno 5462321 eno Bacillus amyloliquefaciens subsp. plantarum str. FZB42 phosphopyruvate hydratase YP_001422688.1 3238423 R 326423 CDS YP_001422689.1 154687528 5462322 complement(3239743..3241278) 1 NC_009725.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase 3241278 pgm2 5462322 pgm2 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 phosphoglyceromutase YP_001422689.1 3239743 R 326423 CDS YP_001422690.1 154687529 5463075 complement(3241271..3242032) 1 NC_009725.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 3242032 tpiA 5463075 tpiA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 triosephosphate isomerase YP_001422690.1 3241271 R 326423 CDS YP_001422691.1 154687530 5463076 complement(3242058..3243242) 1 NC_009725.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 3243242 pgk 5463076 pgk Bacillus amyloliquefaciens subsp. plantarum str. FZB42 phosphoglycerate kinase YP_001422691.1 3242058 R 326423 CDS YP_001422692.1 154687531 5463077 complement(3243564..3244571) 1 NC_009725.1 glyceraldehyde-3-phosphate dehydrogenase GapA; hypothetical protein 3244571 gapA 5463077 gapA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422692.1 3243564 R 326423 CDS YP_001422693.1 154687532 5463078 complement(3244605..3245639) 1 NC_009725.1 central glycolytic genes regulator CggR; CggR 3245639 cggR 5463078 cggR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 CggR YP_001422693.1 3244605 R 326423 CDS YP_001422694.1 154687533 5463079 complement(3245904..3247298) 1 NC_009725.1 arabinose-proton symporter AraE; AraE family aromatic acid exporter 3247298 araE 5463079 araE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 AraE family aromatic acid exporter YP_001422694.1 3245904 R 326423 CDS YP_001422695.1 154687534 5463080 3247555..3248643 1 NC_009725.1 transcription repressor of arabinose operon AraR; AraR 3248643 araR 5463080 araR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 AraR YP_001422695.1 3247555 D 326423 CDS YP_001422696.1 154687535 5463081 complement(3248679..3249686) 1 NC_009725.1 conserved hypothetical protein YvbT; hypothetical protein 3249686 yvbT 5463081 yvbT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422696.1 3248679 R 326423 CDS YP_001422697.1 154687536 5459882 complement(3250403..3251281) 1 NC_009725.1 conserved hypothetical protein YvbU; hypothetical protein 3251281 yvbU 5459882 yvbU Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422697.1 3250403 R 326423 CDS YP_001422698.1 154687537 5459883 3251379..3252296 1 NC_009725.1 conserved hypothetical protein YvbV; hypothetical protein 3252296 yvbV 5459883 yvbV Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422698.1 3251379 D 326423 CDS YP_001422699.1 154687538 5459884 complement(3252881..3253672) 1 NC_009725.1 amino acid permease YvbW; hypothetical protein 3253672 yvbW 5459884 yvbW Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422699.1 3252881 R 326423 CDS YP_001422700.1 154687539 5459885 3254657..3255964 1 NC_009725.1 hypothetical protein 3255964 5459885 RBAM_031380 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422700.1 3254657 D 326423 CDS YP_001422701.1 154687540 5459886 complement(3255994..3256968) 1 NC_009725.1 hypothetical protein 3256968 5459886 RBAM_031390 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422701.1 3255994 R 326423 CDS YP_001422702.1 154687541 5459887 complement(3257037..3257705) 1 NC_009725.1 hypothetical protein 3257705 5459887 RBAM_031400 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422702.1 3257037 R 326423 CDS YP_001422703.1 154687542 5459888 complement(3257702..3258589) 1 NC_009725.1 hypothetical protein 3258589 5459888 RBAM_031410 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422703.1 3257702 R 326423 CDS YP_001422704.1 154687543 5459869 3259089..3259946 1 NC_009725.1 RpiR family transcriptional regulator 3259946 5459869 RBAM_031420 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 RpiR family transcriptional regulator YP_001422704.1 3259089 D 326423 CDS YP_001422705.1 154687544 5459870 3260119..3261663 1 NC_009725.1 gluconate kinase GntK; GntK 3261663 gntK 5459870 gntK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GntK YP_001422705.1 3260119 D 326423 CDS YP_001422706.1 154687545 5459871 3261690..3263018 1 NC_009725.1 gluconate permease GntP; GntP 3263018 gntP 5459871 gntP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GntP YP_001422706.1 3261690 D 326423 CDS YP_001422707.1 154687546 5459872 complement(3263054..3263779) 1 NC_009725.1 conserved hypothetical protein YvbY; hypothetical protein 3263779 yvbY 5459872 yvbY Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422707.1 3263054 R 326423 CDS YP_001422708.1 154687547 5459873 complement(3263776..3265200) 1 NC_009725.1 conserved hypothetical protein YvfW; hypothetical protein 3265200 yvfW 5459873 yvfW Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422708.1 3263776 R 326423 CDS YP_001422709.1 154687548 5459874 complement(3265234..3265950) 1 NC_009725.1 glycolate oxidase YvfV; hypothetical protein 3265950 yvfV 5459874 yvfV Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422709.1 3265234 R 326423 CDS YP_001422710.1 154687549 5459875 complement(3266132..3267322) 1 NC_009725.1 hypothetical protein 3267322 5459875 RBAM_031480 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422710.1 3266132 R 326423 CDS YP_001422711.1 154687550 5461862 complement(3267353..3268072) 1 NC_009725.1 transcriptional regulator YvfI; hypothetical protein 3268072 yvfI 5461862 yvfI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422711.1 3267353 R 326423 CDS YP_001422712.1 154687551 5461863 3268278..3269954 1 NC_009725.1 L-lactate permease YvfH; hypothetical protein 3269954 yvfH 5461863 yvfH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422712.1 3268278 D 326423 CDS YP_001422713.1 154687552 5461864 complement(3269992..3271305) 1 NC_009725.1 RNA polymerase sigma-54 factor SigL; SigL 3271305 sigL 5461864 sigL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SigL YP_001422713.1 3269992 R 326423 CDS YP_001422714.1 154687553 5461865 3271380..3271598 1 NC_009725.1 hypothetical protein YvfG; hypothetical protein 3271598 yvfG 5461865 yvfG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422714.1 3271380 D 326423 CDS YP_001422715.1 154687554 5461866 complement(3271612..3272577) 1 NC_009725.1 exopolysaccharide polymerization protein; hypothetical protein 3272577 epsO 5461866 epsO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422715.1 3271612 R 326423 CDS YP_001422716.1 154687555 5461867 complement(3272556..3273728) 1 NC_009725.1 conserved hypothetical protein; hypothetical protein 3273728 epsN 5461867 epsN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422716.1 3272556 R 326423 CDS YP_001422717.1 154687556 5461868 complement(3273733..3274380) 1 NC_009725.1 conserved hypothetical protein; hypothetical protein 3274380 epsM 5461868 epsM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422717.1 3273733 R 326423 CDS YP_001422718.1 154687557 5461298 complement(3274377..3274985) 1 NC_009725.1 conserved hypothetical protein; hypothetical protein 3274985 epsL 5461298 epsL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422718.1 3274377 R 326423 CDS YP_001422719.1 154687558 5461299 complement(3274982..3276499) 1 NC_009725.1 hypothetical protein 3276499 epsK 5461299 epsK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422719.1 3274982 R 326423 CDS YP_001422720.1 154687559 5461300 complement(3276496..3277530) 1 NC_009725.1 conserved hypothetical protein; hypothetical protein 3277530 epsJ 5461300 epsJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422720.1 3276496 R 326423 CDS YP_001422721.1 154687560 5461301 complement(3277527..3278603) 1 NC_009725.1 conserved hypothetical protein; hypothetical protein 3278603 epsI 5461301 epsI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422721.1 3277527 R 326423 CDS YP_001422722.1 154687561 5461302 complement(3278608..3279645) 1 NC_009725.1 spore coat polysaccharide biosynthesis protein; hypothetical protein 3279645 epsH 5461302 epsH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422722.1 3278608 R 326423 CDS YP_001422723.1 154687562 5461303 complement(3279664..3280767) 1 NC_009725.1 protein for capsular polysaccharide biosynthesis; hypothetical protein 3280767 epsG 5461303 epsG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422723.1 3279664 R 326423 CDS YP_001422724.1 154687563 5461304 complement(3280771..3281907) 1 NC_009725.1 capsular polysaccharide biosynthesis protein; hypothetical protein 3281907 epsF 5461304 epsF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422724.1 3280771 R 326423 CDS YP_001422725.1 154687564 5462423 complement(3281900..3282742) 1 NC_009725.1 exopolysaccharide biosynthesis protein; hypothetical protein 3282742 epsE 5462423 epsE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422725.1 3281900 R 326423 CDS YP_001422726.1 154687565 5462424 complement(3282739..3283878) 1 NC_009725.1 capsular polysaccharide biosynthesis protein; hypothetical protein 3283878 epsD 5462424 epsD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422726.1 3282739 R 326423 CDS YP_001422727.1 154687566 5462425 complement(3283894..3285687) 1 NC_009725.1 capsular polysaccharide biosynthesis protein; hypothetical protein 3285687 epsC 5462425 epsC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422727.1 3283894 R 326423 CDS YP_001422728.1 154687567 5462426 complement(3285933..3286613) 1 NC_009725.1 capsular polysaccharide biosynthesis protein; hypothetical protein 3286613 epsB 5462426 epsB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422728.1 3285933 R 326423 CDS YP_001422729.1 154687568 5462427 complement(3286619..3287326) 1 NC_009725.1 capsular polysaccharide biosynthesis protein; hypothetical protein 3287326 epsA 5462427 epsA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422729.1 3286619 R 326423 CDS YP_001422730.1 154687569 5462428 3287571..3288026 1 NC_009725.1 transcriptional regulator Slr; Slr 3288026 slr 5462428 slr Bacillus amyloliquefaciens subsp. plantarum str. FZB42 Slr YP_001422730.1 3287571 D 326423 CDS YP_001422731.1 154687570 5462429 3288107..3289555 1 NC_009725.1 Para-nitrobenzyl esterase (intracellular esterase B) PnbA; PnbA 3289555 pnbA 5462429 pnbA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 PnbA YP_001422731.1 3288107 D 326423 CDS YP_001422732.1 154687571 5460730 complement(3289594..3290124) 1 NC_009725.1 conserved hypothetical protein YwjB; hypothetical protein 3290124 ywjB 5460730 ywjB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422732.1 3289594 R 326423 CDS YP_001422733.1 154687572 5460731 complement(3290205..3290834) 1 NC_009725.1 conserved hypothetical protein YyaS; hypothetical protein 3290834 yyaS 5460731 yyaS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422733.1 3290205 R 326423 CDS YP_001422734.1 154687573 5460732 3290962..3291486 1 NC_009725.1 protease synthase and sporulation negative regulator PaiA; PaiA 3291486 paiA 5460732 paiA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 PaiA YP_001422734.1 3290962 D 326423 CDS YP_001422735.1 154687574 5460733 complement(3291528..3292016) 1 NC_009725.1 phenolic acid decarboxylase PadC; PadC 3292016 padC 5460733 padC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 PadC YP_001422735.1 3291528 R 326423 CDS YP_001422736.1 154687575 5460734 complement(3292038..3292196) 1 NC_009725.1 hypothetical protein YveG; hypothetical protein 3292196 yveG 5460734 yveG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422736.1 3292038 R 326423 CDS YP_001422737.1 154687576 5460735 complement(3292448..3292786) 1 NC_009725.1 hypothetical protein 3292786 5460735 RBAM_031750 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422737.1 3292448 R 326423 CDS YP_001422738.1 154687577 5460736 complement(3292865..3293179) 1 NC_009725.1 hypothetical protein 3293179 5460736 RBAM_031760 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422738.1 3292865 R 326423 CDS YP_001422739.1 154687578 5462277 3293235..3293642 1 NC_009725.1 hypothetical protein 3293642 5462277 RBAM_031770 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422739.1 3293235 D 326423 CDS YP_001422740.1 154687579 5462278 complement(3294030..3294344) 1 NC_009725.1 hypothetical protein 3294344 5462278 RBAM_031780 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422740.1 3294030 R 326423 CDS YP_001422741.1 154687580 5462279 3294396..3295823 1 NC_009725.1 hypothetical protein 3295823 5462279 RBAM_031790 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422741.1 3294396 D 326423 CDS YP_001422742.1 154687581 5462280 3295840..3296151 1 NC_009725.1 hypothetical protein 3296151 5462280 RBAM_031800 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422742.1 3295840 D 326423 CDS YP_001422743.1 154687582 5462282 complement(3296493..3297962) 1 NC_009725.1 hypothetical protein 3297962 5462282 RBAM_031820 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422743.1 3296493 R 326423 CDS YP_001422744.1 154687583 5460184 complement(3297977..3299209) 1 NC_009725.1 lactose/proton symporter; mediates lactose/proton symport through the membrane by utilizing the proton gradient to drive transport of galactosides; member of major facilitator superfamily; functions as a monomer with 12 transmembrane segments; galactoside permease 3299209 lacY 5460184 lacY Bacillus amyloliquefaciens subsp. plantarum str. FZB42 galactoside permease YP_001422744.1 3297977 R 326423 CDS YP_001422745.1 154687584 5460185 3299600..3300574 1 NC_009725.1 transcriptional regulator 3300574 5460185 RBAM_031840 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 transcriptional regulator YP_001422745.1 3299600 D 326423 CDS YP_001422746.1 154687585 5460186 3300821..3301417 1 NC_009725.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 3301417 clpP 5460186 clpP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ATP-dependent Clp protease proteolytic subunit YP_001422746.1 3300821 D 326423 CDS YP_001422747.1 154687586 5460187 complement(3301461..3302321) 1 NC_009725.1 LysR-family transcription regulator YraN; hypothetical protein 3302321 yraN 5460187 yraN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422747.1 3301461 R 326423 CDS YP_001422748.1 154687587 5460188 3302495..3303625 1 NC_009725.1 conserved hypothetical protein YraM; hypothetical protein 3303625 yraM 5460188 yraM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422748.1 3302495 D 326423 CDS YP_001422749.1 154687588 5460189 3303669..3305045 1 NC_009725.1 transport protein 3305045 5460189 RBAM_031880 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 transport protein YP_001422749.1 3303669 D 326423 CDS YP_001422750.1 154687589 5460190 complement(3305289..3305864) 1 NC_009725.1 conserved hypothetical protein YvdD; hypothetical protein 3305864 yvdD 5460190 yvdD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422750.1 3305289 R 326423 CDS YP_001422751.1 154687590 5462464 3305980..3306300 1 NC_009725.1 conserved hypothetical protein YvdC; hypothetical protein 3306300 yvdC 5462464 yvdC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422751.1 3305980 D 326423 CDS YP_001422752.1 154687591 5462465 complement(3306346..3307935) 1 NC_009725.1 transporter YvdB; hypothetical protein 3307935 yvdB 5462465 yvdB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422752.1 3306346 R 326423 CDS YP_001422753.1 154687592 5462466 complement(3307938..3308519) 1 NC_009725.1 carbonic anhydrase YvdA; hypothetical protein 3308519 yvdA 5462466 yvdA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422753.1 3307938 R 326423 CDS YP_001422754.1 154687593 5462467 3308920..3309885 1 NC_009725.1 2-ketogluconate reductase YvcT; hypothetical protein 3309885 yvcT 5462467 yvcT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422754.1 3308920 D 326423 CDS YP_001422755.1 154687594 5462468 3310031..3310480 1 NC_009725.1 ribonuclease precursor (Barnase) 3310480 5462468 RBAM_031940 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ribonuclease precursor (Barnase) YP_001422755.1 3310031 D 326423 CDS YP_001422756.1 154687595 5462469 complement(3310541..3311287) 1 NC_009725.1 conserved hypothetical protein YvcN; hypothetical protein 3311287 yvcN 5462469 yvcN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422756.1 3310541 R 326423 CDS YP_001422757.1 154687596 5462470 complement(3311312..3311569) 1 NC_009725.1 catabolite repression HPr-like protein Crh; phosphocarrier protein Chr 3311569 crh 5462470 crh Bacillus amyloliquefaciens subsp. plantarum str. FZB42 phosphocarrier protein Chr YP_001422757.1 3311312 R 326423 CDS YP_001422758.1 154687597 5459532 complement(3311593..3312543) 1 NC_009725.1 conserved hypothetical protein YvcL; hypothetical protein 3312543 yvcL 5459532 yvcL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422758.1 3311593 R 326423 CDS YP_001422759.1 154687598 5459533 complement(3312570..3313523) 1 NC_009725.1 conserved hypothetical protein YvcK; hypothetical protein 3313523 yvcK 5459533 yvcK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422759.1 3312570 R 326423 CDS YP_001422760.1 154687599 5459534 complement(3313520..3314407) 1 NC_009725.1 conserved hypothetical protein YvcJ; hypothetical protein 3314407 yvcJ 5459534 yvcJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422760.1 3313520 R 326423 CDS YP_001422761.1 154687600 5459535 complement(3314433..3314900) 1 NC_009725.1 conserved hypothetical protein YvcI; hypothetical protein 3314900 yvcI 5459535 yvcI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422761.1 3314433 R 326423 CDS YP_001422762.1 154687601 5459536 complement(3315174..3316127) 1 NC_009725.1 thioredoxin reductase TrxB; hypothetical protein 3316127 trxB 5459536 trxB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422762.1 3315174 R 326423 CDS YP_001422763.1 154687602 5459537 complement(3316331..3317743) 1 NC_009725.1 conserved hypothetical protein CwlO; hypothetical protein 3317743 cwlO 5459537 cwlO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422763.1 3316331 R 326423 CDS YP_001422764.1 154687603 5459538 complement(3318140..3319594) 1 NC_009725.1 conserved hypothetical protein YvcD; hypothetical protein 3319594 yvcD 5459538 yvcD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422764.1 3318140 R 326423 CDS YP_001422765.1 154687604 5460830 complement(3319710..3320771) 1 NC_009725.1 two-component sensor histidine kinase 3320771 5460830 RBAM_032040 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 two-component sensor histidine kinase YP_001422765.1 3319710 R 326423 CDS YP_001422766.1 154687605 5460831 complement(3320768..3321445) 1 NC_009725.1 two-component response regulator 3321445 5460831 RBAM_032050 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 two-component response regulator YP_001422766.1 3320768 R 326423 CDS YP_001422767.1 154687606 5460832 complement(3321640..3323409) 1 NC_009725.1 ABC transporter (ATP-binding protein) YvcC; hypothetical protein 3323409 yvcC 5460832 yvcC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422767.1 3321640 R 326423 CDS YP_001422768.1 154687607 5460833 complement(3323621..3324241) 1 NC_009725.1 catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein 3324241 hisI 5460833 hisI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein YP_001422768.1 3323621 R 326423 CDS YP_001422769.1 154687608 5460834 complement(3324238..3324996) 1 NC_009725.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 3324996 hisF 5460834 hisF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 imidazole glycerol phosphate synthase subunit HisF YP_001422769.1 3324238 R 326423 CDS YP_001422770.1 154687609 5460835 complement(3324993..3325730) 1 NC_009725.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 3325730 hisA 5460835 hisA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase YP_001422770.1 3324993 R 326423 CDS YP_001422771.1 154687610 5460836 complement(3325727..3326365) 1 NC_009725.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 3326365 hisH 5460836 hisH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 imidazole glycerol phosphate synthase subunit HisH YP_001422771.1 3325727 R 326423 CDS YP_001422772.1 154687611 5461046 complement(3326366..3326950) 1 NC_009725.1 catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase 3326950 hisB 5461046 hisB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 imidazoleglycerol-phosphate dehydratase YP_001422772.1 3326366 R 326423 CDS YP_001422773.1 154687612 5461047 complement(3326916..3328229) 1 NC_009725.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 3328229 hisD 5461047 hisD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 histidinol dehydrogenase YP_001422773.1 3326916 R 326423 CDS YP_001422774.1 154687613 5461048 complement(3328226..3328867) 1 NC_009725.1 short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ; ATP phosphoribosyltransferase 3328867 hisG 5461048 hisG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ATP phosphoribosyltransferase YP_001422774.1 3328226 R 326423 CDS YP_001422775.1 154687614 5461049 complement(3328860..3330032) 1 NC_009725.1 May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine; ATP phosphoribosyltransferase 3330032 hisZ 5461049 hisZ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ATP phosphoribosyltransferase YP_001422775.1 3328860 R 326423 CDS YP_001422776.1 154687615 5461050 3330273..3330998 1 NC_009725.1 conserved hypothetical protein YvpB; hypothetical protein 3330998 yvpB 5461050 yvpB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422776.1 3330273 D 326423 CDS YP_001422777.1 154687616 5461051 complement(3331019..3331534) 1 NC_009725.1 acetyltransferase YvoF; hypothetical protein 3331534 yvoF 5461051 yvoF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422777.1 3331019 R 326423 CDS YP_001422778.1 154687617 5461052 complement(3331538..3332188) 1 NC_009725.1 hydrolyzes pyrophosphate formed during serine-46-phosphorylated HPr dephosphorylation; pyrophosphatase PpaX 3332188 hprP 5461052 hprP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 pyrophosphatase PpaX YP_001422778.1 3331538 R 326423 CDS YP_001422779.1 154687618 5461986 complement(3332214..3333029) 1 NC_009725.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 3333029 lgt 5461986 lgt Bacillus amyloliquefaciens subsp. plantarum str. FZB42 prolipoprotein diacylglyceryl transferase YP_001422779.1 3332214 R 326423 CDS YP_001422780.1 154687619 5461987 complement(3333044..3333976) 1 NC_009725.1 catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system; HPr kinase/phosphorylase 3333976 hprK 5461987 hprK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 HPr kinase/phosphorylase YP_001422780.1 3333044 R 326423 CDS YP_001422781.1 154687620 5461988 3334146..3335336 1 NC_009725.1 N-acetylglucosamine-6-phosphate deacetylase NagA; hypothetical protein 3335336 nagA 5461988 nagA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422781.1 3334146 D 326423 CDS YP_001422782.1 154687621 5461989 3335333..3336058 1 NC_009725.1 N-acetylglucosamine-6-phosphate isomerase NagB; NagB 3336058 nagB 5461989 nagB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 NagB YP_001422782.1 3335333 D 326423 CDS YP_001422783.1 154687622 5461990 3336072..3336803 1 NC_009725.1 transcription regulator YvoA; hypothetical protein 3336803 yvoA 5461990 yvoA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422783.1 3336072 D 326423 CDS YP_001422784.1 154687623 5461991 complement(3336948..3337523) 1 NC_009725.1 HTH-type transcriptional regulator YxaF; hypothetical protein 3337523 yxaF 5461991 yxaF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422784.1 3336948 R 326423 CDS YP_001422785.1 154687624 5461992 complement(3337690..3341559) 1 NC_009725.1 conserved hypothetical protein YvnB; hypothetical protein 3341559 yvnB 5461992 yvnB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422785.1 3337690 R 326423 CDS YP_001422786.1 154687625 5459798 complement(3341653..3342012) 1 NC_009725.1 conserved hypothetical protein YvlD; hypothetical protein 3342012 yvlD 5459798 yvlD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422786.1 3341653 R 326423 CDS YP_001422787.1 154687626 5459799 complement(3342013..3342207) 1 NC_009725.1 conserved hypothetical protein YvlC; hypothetical protein 3342207 yvlC 5459799 yvlC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422787.1 3342013 R 326423 CDS YP_001422788.1 154687627 5459800 complement(3342212..3343309) 1 NC_009725.1 conserved hypothetical protein YvlB; hypothetical protein 3343309 yvlB 5459800 yvlB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422788.1 3342212 R 326423 CDS YP_001422789.1 154687628 5459801 complement(3343334..3343660) 1 NC_009725.1 hypothetical protein YvlA; hypothetical protein 3343660 yvlA 5459801 yvlA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422789.1 3343334 R 326423 CDS YP_001422790.1 154687629 5459802 3343858..3344118 1 NC_009725.1 hypothetical protein YvkN; hypothetical protein 3344118 yvkN 5459802 yvkN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422790.1 3343858 D 326423 CDS YP_001422791.1 154687630 5459803 complement(3344144..3347017) 1 NC_009725.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A 3347017 uvrA 5459803 uvrA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 excinuclease ABC subunit A YP_001422791.1 3344144 R 326423 CDS YP_001422792.1 154687631 5459804 complement(3347025..3349010) 1 NC_009725.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 3349010 uvrB 5459804 uvrB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 excinuclease ABC subunit B YP_001422792.1 3347025 R 326423 CDS YP_001422793.1 154687632 5462719 complement(3349186..3349422) 1 NC_009725.1 membrane protein CsbA; hypothetical protein 3349422 csbA 5462719 csbA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422793.1 3349186 R 326423 CDS YP_001422794.1 154687633 5462720 3349724..3352225 1 NC_009725.1 conserved hypothetical protein YvkC; hypothetical protein 3352225 yvkC 5462720 yvkC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422794.1 3349724 D 326423 CDS YP_001422795.1 154687634 5462721 3352294..3352920 1 NC_009725.1 conserved hypothetical protein YvkB; hypothetical protein 3352920 yvkB 5462721 yvkB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422795.1 3352294 D 326423 CDS YP_001422796.1 154687635 5462722 3352893..3354230 1 NC_009725.1 conserved hypothetical protein YvkA; hypothetical protein 3354230 yvkA 5462722 yvkA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422796.1 3352893 D 326423 CDS YP_001422797.1 154687636 5462723 complement(3354462..3355652) 1 NC_009725.1 conserved hypothetical protein YvjD; hypothetical protein 3355652 yvjD 5462723 yvjD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422797.1 3354462 R 326423 CDS YP_001422798.1 154687637 5462724 complement(3355727..3356080) 1 NC_009725.1 swarming motility protein; SwrA 3356080 swrA 5462724 swrA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SwrA YP_001422798.1 3355727 R 326423 CDS YP_001422799.1 154687638 5462725 complement(3356453..3357853) 1 NC_009725.1 periplasmic protease YvjB; hypothetical protein 3357853 yvjB 5462725 yvjB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422799.1 3356453 R 326423 CDS YP_001422800.1 154687639 5462897 3358021..3359427 1 NC_009725.1 hypothetical protein YwoF; hypothetical protein 3359427 ywoF 5462897 ywoF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422800.1 3358021 D 326423 CDS YP_001422801.1 154687640 5462898 complement(3359474..3360373) 1 NC_009725.1 cell-division protein FtsX; hypothetical protein 3360373 ftsX 5462898 ftsX Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422801.1 3359474 R 326423 CDS YP_001422802.1 154687641 5462899 complement(3360357..3361043) 1 NC_009725.1 cell-division ATP-binding protein FtsE; hypothetical protein 3361043 ftsE 5462899 ftsE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422802.1 3360357 R 326423 CDS YP_001422803.1 154687642 5462900 complement(3361262..3361603) 1 NC_009725.1 cytochrome c551 (CccB); CccB 3361603 cccB 5462900 cccB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 CccB YP_001422803.1 3361262 R 326423 CDS YP_001422804.1 154687643 5462901 complement(3361639..3362487) 1 NC_009725.1 conserved hypothetical protein YvjA; hypothetical protein 3362487 yvjA 5462901 yvjA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422804.1 3361639 R 326423 CDS YP_001422805.1 154687644 5462902 complement(3362657..3363640) 1 NC_009725.1 peptide chain release factor II (PrfB); hypothetical protein 3363640 prfB 5462902 prfB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422805.1 3362657 R 326423 CDS YP_001422806.1 154687645 5462903 complement(3363833..3366358) 1 NC_009725.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 3366358 secA 5462903 secA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 preprotein translocase subunit SecA YP_001422806.1 3363833 R 326423 CDS YP_001422807.1 154687646 5461395 complement(3366525..3367091) 1 NC_009725.1 conserved hypothetical protein YvyD; hypothetical protein 3367091 yvyD 5461395 yvyD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422807.1 3366525 R 326423 CDS YP_001422808.1 154687647 5461396 complement(3367286..3367663) 1 NC_009725.1 hypothetical protein 3367663 5461396 RBAM_032470 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422808.1 3367286 R 326423 CDS YP_001422809.1 154687648 5461397 complement(3367673..3368017) 1 NC_009725.1 flagellar protein FliT; FliT 3368017 fliT 5461397 fliT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 FliT YP_001422809.1 3367673 R 326423 CDS YP_001422810.1 154687649 5461398 complement(3368017..3368418) 1 NC_009725.1 flagellin specific chaperone; flagellar protein FliS 3368418 fliS 5461398 fliS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 flagellar protein FliS YP_001422810.1 3368017 R 326423 CDS YP_001422811.1 154687650 5461399 complement(3368438..3369985) 1 NC_009725.1 flagellin HAP2; involved in flagellin assembly; flagellar capping protein 3369985 fliD 5461399 fliD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 flagellar capping protein YP_001422811.1 3368438 R 326423 CDS YP_001422812.1 154687651 5461400 complement(3370236..3371066) 1 NC_009725.1 flagellin; involved in elicitation of plant basal defence; upregulation by root exudate; Hag 3371066 hag 5461400 hag Bacillus amyloliquefaciens subsp. plantarum str. FZB42 Hag YP_001422812.1 3370236 R 326423 CDS YP_001422813.1 154687652 5461401 complement(3371210..3371434) 1 NC_009725.1 affects carbohydrate metabolism; has regulatory role in many processes; carbon storage regulator 3371434 csrA 5461401 csrA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 carbon storage regulator YP_001422813.1 3371210 R 326423 CDS YP_001422814.1 154687653 5461027 complement(3371428..3371859) 1 NC_009725.1 binds to flagellin and appears to stabilize flagellin during flagella assembly; flagellar assembly protein FliW 3371859 yviF 5461027 yviF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 flagellar assembly protein FliW YP_001422814.1 3371428 R 326423 CDS YP_001422815.1 154687654 5461028 complement(3371889..3372452) 1 NC_009725.1 hypothetical protein YviE; hypothetical protein 3372452 yviE 5461028 yviE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422815.1 3371889 R 326423 CDS YP_001422816.1 154687655 5461029 complement(3372549..3373466) 1 NC_009725.1 with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgL 3373466 flgL 5461029 flgL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 flagellar hook-associated protein FlgL YP_001422816.1 3372549 R 326423 CDS YP_001422817.1 154687656 5461030 complement(3373478..3374995) 1 NC_009725.1 flagellin HAP1; with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgK 3374995 flgK 5461030 flgK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 flagellar hook-associated protein FlgK YP_001422817.1 3373478 R 326423 CDS YP_001422818.1 154687657 5461031 complement(3375011..3375493) 1 NC_009725.1 conserved hypothetical protein YvyG; hypothetical protein 3375493 yvyG 5461031 yvyG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422818.1 3375011 R 326423 CDS YP_001422819.1 154687658 5461032 complement(3375508..3375774) 1 NC_009725.1 negative regulator of flagellin synthesis (Anti-sigma-D factor) FlgM; hypothetical protein 3375774 flgM 5461032 flgM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422819.1 3375508 R 326423 CDS YP_001422820.1 154687659 5461033 complement(3375844..3376263) 1 NC_009725.1 hypothetical protein YvyF; hypothetical protein 3376263 yvyF 5461033 yvyF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422820.1 3375844 R 326423 CDS YP_001422821.1 154687660 5459656 complement(3376337..3377014) 1 NC_009725.1 competence protein FC (ComFC); hypothetical protein 3377014 comFC 5459656 comFC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422821.1 3376337 R 326423 CDS YP_001422822.1 154687661 5459657 complement(3377032..3377316) 1 NC_009725.1 competence protein FB (ComFB); ComFB 3377316 comFB 5459657 comFB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ComFB YP_001422822.1 3377032 R 326423 CDS YP_001422823.1 154687662 5459658 complement(3377374..3378759) 1 NC_009725.1 late competence protein ComFA; ComFA 3378759 comFA 5459658 comFA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ComFA YP_001422823.1 3377374 R 326423 CDS YP_001422824.1 154687663 5459659 complement(3378867..3379715) 1 NC_009725.1 conserved hypothetical protein YviA; hypothetical protein 3379715 yviA 5459659 yviA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422824.1 3378867 R 326423 CDS YP_001422825.1 154687664 5459660 complement(3379813..3380502) 1 NC_009725.1 two-component response regulator DegU; DegU 3380502 degU 5459660 degU Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DegU YP_001422825.1 3379813 R 326423 CDS YP_001422826.1 154687665 5459661 complement(3380579..3381742) 1 NC_009725.1 two-component sensor histidine kinase DegS; DegS 3381742 degS 5459661 degS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DegS YP_001422826.1 3380579 R 326423 CDS YP_001422827.1 154687666 5459662 3381965..3382612 1 NC_009725.1 conserved hypothetical protein YvyE; hypothetical protein 3382612 yvyE 5459662 yvyE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422827.1 3381965 D 326423 CDS YP_001422828.1 154687667 5460927 3382617..3383837 1 NC_009725.1 transcriptional regulator YvhJ; hypothetical protein 3383837 yvhJ 5460927 yvhJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422828.1 3382617 D 326423 CDS YP_001422829.1 154687668 5460928 complement(3383936..3385012) 1 NC_009725.1 undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase ; probably involved in elicitation of plant basal defence; TagO 3385012 tagO 5460928 tagO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 TagO YP_001422829.1 3383936 R 326423 CDS YP_001422830.1 154687669 5460929 complement(3385145..3386341) 1 NC_009725.1 teichuronic acid biosynthesis glycosyl transferase; probably involved in elicitation of plant basal defence; TuaH 3386341 tuaH 5460929 tuaH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 TuaH YP_001422830.1 3385145 R 326423 CDS YP_001422831.1 154687670 5460930 complement(3386361..3387119) 1 NC_009725.1 teichuronic acid biosynthesis glycosyl transferase; probably involved in elicitation of plant basal defence; TuaG 3387119 tuaG 5460930 tuaG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 TuaG YP_001422831.1 3386361 R 326423 CDS YP_001422832.1 154687671 5460931 complement(3387143..3387823) 1 NC_009725.1 teichuronic acid biosynthesis protein; probably involved in elicitation of plant basal defence; TuaF 3387823 tuaF 5460931 tuaF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 TuaF YP_001422832.1 3387143 R 326423 CDS YP_001422833.1 154687672 5460932 complement(3387820..3389307) 1 NC_009725.1 teichuronic acid biosynthesis protein; probably involved in elicitation of plant basal defence; TuaE 3389307 tuaE 5460932 tuaE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 TuaE YP_001422833.1 3387820 R 326423 CDS YP_001422834.1 154687673 5460933 complement(3389374..3390714) 1 NC_009725.1 UDP-glucose 6-dehydrogenase; probably involved in elicitation of plant basal defence; TuaD 3390714 tuaD 5460933 tuaD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 TuaD YP_001422834.1 3389374 R 326423 CDS YP_001422835.1 154687674 5460343 complement(3390719..3391915) 1 NC_009725.1 teichuronic acid biosynthesis glycosyl transferase; probably involved in elicitation of plant basal defence; TuaC 3391915 tuaC 5460343 tuaC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 TuaC YP_001422835.1 3390719 R 326423 CDS YP_001422836.1 154687675 5460344 complement(3391912..3393360) 1 NC_009725.1 teichuronic acid biosynthesis protein; probably involved in elicitation of plant basal defence; colanic acid exporter 3393360 tuaB 5460344 tuaB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 colanic acid exporter YP_001422836.1 3391912 R 326423 CDS YP_001422837.1 154687676 5460345 complement(3393397..3394038) 1 NC_009725.1 undecaprenyl-phosphate N-acetylgalactosaminyl 1-phosphate transferase; probably involved in elicitation of plant basal defence; TuaA 3394038 tuaA 5460345 tuaA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 TuaA YP_001422837.1 3393397 R 326423 CDS YP_001422838.1 154687677 5460346 complement(3394273..3395763) 1 NC_009725.1 N-acetylmuramoyl-L-alanine amidase (major autolysin) (CWBP49); LytC 3395763 lytC 5460346 lytC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 LytC YP_001422838.1 3394273 R 326423 CDS YP_001422839.1 154687678 5460347 complement(3395785..3397905) 1 NC_009725.1 amidase enhancer precursor (Modifier protein of major autolysin); hypothetical protein 3397905 lytB 5460347 lytB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422839.1 3395785 R 326423 CDS YP_001422840.1 154687679 5460348 complement(3397938..3398255) 1 NC_009725.1 membrane bound lipoprotein; LytA 3398255 lytA 5460348 lytA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 LytA YP_001422840.1 3397938 R 326423 CDS YP_001422841.1 154687680 5460349 3398436..3399353 1 NC_009725.1 attenuator function for control of operon expression; membrane-bound transcriptional regulator LytR 3399353 lytR 5460349 lytR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 membrane-bound transcriptional regulator LytR YP_001422841.1 3398436 D 326423 CDS YP_001422842.1 154687681 5461962 complement(3399385..3400524) 1 NC_009725.1 UDP-N-acetylglucosamine 2-epimerase (UDP-GlcNAc-2- epimerase); MnaA 3400524 mnaA 5461962 mnaA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 MnaA YP_001422842.1 3399385 R 326423 CDS YP_001422843.1 154687682 5461963 3400753..3401637 1 NC_009725.1 UTP-glucose-1-phosphate uridylyltransferase; GtaB 3401637 gtaB 5461963 gtaB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GtaB YP_001422843.1 3400753 D 326423 CDS YP_001422844.1 154687683 5461964 complement(3401677..3403221) 1 NC_009725.1 with TagG is involved in the export of teichoic acids; teichoic acids export protein ATP-binding subunit 3403221 tagH 5461964 tagH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 teichoic acids export protein ATP-binding subunit YP_001422844.1 3401677 R 326423 CDS YP_001422845.1 154687684 5461965 complement(3403242..3404069) 1 NC_009725.1 teichoic acid translocation permease protein; hypothetical protein 3404069 tagG 5461965 tagG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422845.1 3403242 R 326423 CDS YP_001422846.1 154687685 5461966 complement(3404255..3406429) 1 NC_009725.1 CDP-glycerol:poly (glycerol phosphate) glycero-phosphotransferase; TagF 3406429 tagF 5461966 tagF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 TagF YP_001422846.1 3404255 R 326423 CDS YP_001422847.1 154687686 5461967 complement(3406479..3408017) 1 NC_009725.1 minor teichoic acid biosynthesis protein ggaA like protein 3408017 5461967 RBAM_032860 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 minor teichoic acid biosynthesis protein ggaA like protein YP_001422847.1 3406479 R 326423 CDS YP_001422848.1 154687687 5461968 complement(3408155..3408544) 1 NC_009725.1 glycerol-3-phosphate cytidylyltransferase; hypothetical protein 3408544 tagD 5461968 tagD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422848.1 3408155 R 326423 CDS YP_001422849.1 154687688 5461599 3408900..3409670 1 NC_009725.1 N-acetylmannosaminyltransferase (major teichoic acid biosynthesis protein A); TagA 3409670 tagA 5461599 tagA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 TagA YP_001422849.1 3408900 D 326423 CDS YP_001422850.1 154687689 5461600 3409703..3410869 1 NC_009725.1 CDP-glycerol:glycerophosphate glycerophospho transferase (major teichoic acid biosynthesis protein B); TagB 3410869 tagB 5461600 tagB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 TagB YP_001422850.1 3409703 D 326423 CDS YP_001422851.1 154687690 5461601 complement(3410931..3413576) 1 NC_009725.1 beta-N-acetylglucosaminidase (major autolysin) (CWBP90); LytD 3413576 lytD 5461601 lytD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 LytD YP_001422851.1 3410931 R 326423 CDS YP_001422852.1 154687691 5461602 complement(3413716..3414666) 1 NC_009725.1 mannose-6-phosphate isomerase; Pmi 3414666 pmi 5461602 pmi Bacillus amyloliquefaciens subsp. plantarum str. FZB42 Pmi YP_001422852.1 3413716 R 326423 CDS YP_001422853.1 154687692 5461603 3414886..3416337 1 NC_009725.1 spore germination protein BA; GerBA 3416337 gerBA 5461603 gerBA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GerBA YP_001422853.1 3414886 D 326423 CDS YP_001422854.1 154687693 5461604 3416343..3417449 1 NC_009725.1 spore germination protein BB; GerBB 3417449 gerBB 5461604 gerBB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GerBB YP_001422854.1 3416343 D 326423 CDS YP_001422855.1 154687694 5461605 3417446..3418576 1 NC_009725.1 spore germination protein BC (GerBC); GerBC 3418576 gerBC 5461605 gerBC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GerBC YP_001422855.1 3417446 D 326423 CDS YP_001422856.1 154687695 5461086 complement(3418580..3419992) 1 NC_009725.1 hypothetical protein 3419992 5461086 RBAM_032950 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422856.1 3418580 R 326423 CDS YP_001422857.1 154687696 5461087 complement(3420085..3421461) 1 NC_009725.1 transport protein YwtG; hypothetical protein 3421461 ywtG 5461087 ywtG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422857.1 3420085 R 326423 CDS YP_001422858.1 154687697 5461088 3421764..3422750 1 NC_009725.1 transcriptional regulator YwtF; hypothetical protein 3422750 ywtF 5461088 ywtF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422858.1 3421764 D 326423 CDS YP_001422859.1 154687698 5461089 3422906..3423763 1 NC_009725.1 conserved hypothetical protein YwtE; hypothetical protein 3423763 ywtE 5461089 ywtE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422859.1 3422906 D 326423 CDS YP_001422860.1 154687699 5461090 3423866..3424600 1 NC_009725.1 conserved hypothetical protein YttA; hypothetical protein 3424600 yttA 5461090 yttA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422860.1 3423866 D 326423 CDS YP_001422861.1 154687700 5461091 complement(3424639..3425874) 1 NC_009725.1 gamma-DL-glutamyl hydrolase precursor PgdS; PgdS 3425874 pgdS 5461091 pgdS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 PgdS YP_001422861.1 3424639 R 326423 CDS YP_001422862.1 154687701 5461092 complement(3426025..3426186) 1 NC_009725.1 hypothetical protein YwtC; hypothetical protein 3426186 ywtC 5461092 ywtC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422862.1 3426025 R 326423 CDS YP_001422863.1 154687702 5460788 complement(3426194..3427342) 1 NC_009725.1 conserved hypothetical protein YwtB; hypothetical protein 3427342 ywtB 5460788 ywtB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422863.1 3426194 R 326423 CDS YP_001422864.1 154687703 5460789 complement(3427361..3427810) 1 NC_009725.1 poly-gamma-glutamic synthesis pgsC protein YwtA; hypothetical protein 3427810 ywtA 5460789 ywtA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422864.1 3427361 R 326423 CDS YP_001422865.1 154687704 5460790 complement(3427825..3429006) 1 NC_009725.1 poly-gamma-glutamic synthesis pgsB protein YwsC; hypothetical protein 3429006 ywsC 5460790 ywsC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422865.1 3427825 R 326423 CDS YP_001422866.1 154687705 5460791 3429147..3429890 1 NC_009725.1 spore germination protein GerKA1; GerKA1 3429890 gerKA1 5460791 gerKA1 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GerKA1 YP_001422866.1 3429147 D 326423 CDS YP_001422867.1 154687706 5460792 3429880..3430971 1 NC_009725.1 spore germination protein GerKB1; GerKB1 3430971 gerKB1 5460792 gerKB1 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GerKB1 YP_001422867.1 3429880 D 326423 CDS YP_001422868.1 154687707 5460793 3430961..3432094 1 NC_009725.1 spore germination protein GerKC1; GerKC1 3432094 gerKC1 5460793 gerKC1 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GerKC1 YP_001422868.1 3430961 D 326423 CDS YP_001422869.1 154687708 5460794 3432185..3433177 1 NC_009725.1 ribose operon transcriptional repressor RbsR; RbsR 3433177 rbsR 5460794 rbsR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 RbsR YP_001422869.1 3432185 D 326423 CDS YP_001422870.1 154687709 5462879 3433170..3434051 1 NC_009725.1 ribokinase RbsK; hypothetical protein 3434051 rbsK 5462879 rbsK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422870.1 3433170 D 326423 CDS YP_001422871.1 154687710 5462880 3434048..3434443 1 NC_009725.1 cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose; RbsD is required for efficient ribose utilization in E. coli; rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source; D-ribose pyranase 3434443 rbsD 5462880 rbsD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 D-ribose pyranase YP_001422871.1 3434048 D 326423 CDS YP_001422872.1 154687711 5462881 3434460..3435953 1 NC_009725.1 ribose ABC transporter (ATP-binding protein) RbsA; RbsA 3435953 rbsA 5462881 rbsA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 RbsA YP_001422872.1 3434460 D 326423 CDS YP_001422873.1 154687712 5462882 3435943..3436914 1 NC_009725.1 ribose ABC transporter (permease) RbsC; RbsC 3436914 rbsC 5462882 rbsC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 RbsC YP_001422873.1 3435943 D 326423 CDS YP_001422874.1 154687713 5462883 3436928..3437845 1 NC_009725.1 ribose ABC transporter (ribose-binding protein) RbsB; hypothetical protein 3437845 rbsB 5462883 rbsB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422874.1 3436928 D 326423 CDS YP_001422875.1 154687714 5462884 3437906..3438439 1 NC_009725.1 conserved hypothetical protein YwsB; hypothetical protein 3438439 ywsB 5462884 ywsB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422875.1 3437906 D 326423 CDS YP_001422876.1 154687715 5462885 complement(3438564..3439097) 1 NC_009725.1 NAD(P)H oxidoreductase YwrO; hypothetical protein 3439097 ywrO 5462885 ywrO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422876.1 3438564 R 326423 CDS YP_001422877.1 154687716 5459842 complement(3439190..3439957) 1 NC_009725.1 alpha-acetolactate decarboxylase; synthesis of 2,3-butanediol; plant growth promotion and elicitation of plant ISR; hypothetical protein 3439957 alsD 5459842 alsD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422877.1 3439190 R 326423 CDS YP_001422878.1 154687717 5459843 complement(3440018..3441733) 1 NC_009725.1 catalyzes the formation of 2-acetolactate from pyruvate in stationary phase; acetolactate synthase 3441733 alsS 5459843 alsS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 acetolactate synthase YP_001422878.1 3440018 R 326423 CDS YP_001422879.1 154687718 5459844 3441887..3442795 1 NC_009725.1 LysR transcription regulator; synthesis of 2,3-butanediol; plant growth promotion and elicitation of plant ISR; AlsR 3442795 alsR 5459844 alsR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 AlsR YP_001422879.1 3441887 D 326423 CDS YP_001422880.1 154687719 5459845 3442992..3444323 1 NC_009725.1 transporter YwrK; hypothetical protein 3444323 ywrK 5459845 ywrK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422880.1 3442992 D 326423 CDS YP_001422881.1 154687720 5459846 complement(3444372..3445046) 1 NC_009725.1 hypothetical protein YwrJ; hypothetical protein 3445046 ywrJ 5459846 ywrJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422881.1 3444372 R 326423 CDS YP_001422882.1 154687721 5459847 complement(3445088..3445978) 1 NC_009725.1 spore coat protein B (outer) (CotB); CotB 3445978 cotB 5459847 cotB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 CotB YP_001422882.1 3445088 R 326423 CDS YP_001422883.1 154687722 5459848 complement(3446101..3447195) 1 NC_009725.1 spore coat protein H (inner) (CotH); CotH 3447195 cotH 5459848 cotH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 CotH YP_001422883.1 3446101 R 326423 CDS YP_001422884.1 154687723 5460404 3447336..3447866 1 NC_009725.1 spore coat protein G (CotG); CotG 3447866 cotG 5460404 cotG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 CotG YP_001422884.1 3447336 D 326423 CDS YP_001422885.1 154687724 5460405 3448023..3448643 1 NC_009725.1 conserved hypothetical protein YwrF; hypothetical protein 3448643 ywrF 5460405 ywrF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422885.1 3448023 D 326423 CDS YP_001422886.1 154687725 5460406 3448798..3448893 1 NC_009725.1 hypothetical protein 3448893 5460406 RBAM_033250 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422886.1 3448798 D 326423 CDS YP_001422887.1 154687726 5460407 3448929..3449099 1 NC_009725.1 hypothetical protein 3449099 5460407 RBAM_033260 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422887.1 3448929 D 326423 CDS YP_001422888.1 154687727 5460408 complement(3449102..3450679) 1 NC_009725.1 gamma-glutamyltransferase YwrD; hypothetical protein 3450679 ywrD 5460408 ywrD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422888.1 3449102 R 326423 CDS YP_001422889.1 154687728 5460409 3450887..3451363 1 NC_009725.1 transcription regulator YwrC; hypothetical protein 3451363 ywrC 5460409 ywrC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422889.1 3450887 D 326423 CDS YP_001422890.1 154687729 5460410 3451377..3451967 1 NC_009725.1 chromate transporter YwrB; hypothetical protein 3451967 ywrB 5460410 ywrB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422890.1 3451377 D 326423 CDS YP_001422891.1 154687730 5461612 3451964..3452500 1 NC_009725.1 chromate transporter YwrA; hypothetical protein 3452500 ywrA 5461612 ywrA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422891.1 3451964 D 326423 CDS YP_001422892.1 154687731 5461613 complement(3452658..3453374) 1 NC_009725.1 endonuclease V (yYwqL; hypothetical protein 3453374 ywqL 5461613 ywqL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422892.1 3452658 R 326423 CDS YP_001422893.1 154687732 5461614 complement(3453415..3453915) 1 NC_009725.1 hypothetical protein 3453915 5461614 RBAM_033320 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422893.1 3453415 R 326423 CDS YP_001422894.1 154687733 5461615 complement(3454253..3454543) 1 NC_009725.1 hypothetical protein 3454543 5461615 RBAM_033330 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422894.1 3454253 R 326423 CDS YP_001422895.1 154687734 5461616 complement(3454662..3455204) 1 NC_009725.1 hypothetical protein 3455204 5461616 RBAM_033340 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422895.1 3454662 R 326423 CDS YP_001422896.1 154687735 5461617 complement(3455205..3455531) 1 NC_009725.1 hypothetical protein 3455531 5461617 RBAM_033350 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422896.1 3455205 R 326423 CDS YP_001422897.1 154687736 5461618 3455727..3456329 1 NC_009725.1 hypothetical protein 3456329 5461618 RBAM_033360 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422897.1 3455727 D 326423 CDS YP_001422898.1 154687737 5460144 complement(3456490..3457002) 1 NC_009725.1 hypothetical protein 3457002 5460144 RBAM_033380 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422898.1 3456490 R 326423 CDS YP_001422899.1 154687738 5460145 complement(3457481..3457942) 1 NC_009725.1 hypothetical protein 3457942 5460145 RBAM_033390 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422899.1 3457481 R 326423 CDS YP_001422900.1 154687739 5460146 complement(3458223..3458528) 1 NC_009725.1 hypothetical protein 3458528 5460146 RBAM_033400 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422900.1 3458223 R 326423 CDS YP_001422901.1 154687740 5460147 complement(3458545..3460293) 1 NC_009725.1 hypothetical protein YwqJ; hypothetical protein 3460293 ywqJ 5460147 ywqJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422901.1 3458545 R 326423 CDS YP_001422902.1 154687741 5460148 complement(3460313..3460573) 1 NC_009725.1 hypothetical protein YwqI; hypothetical protein 3460573 ywqI 5460148 ywqI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422902.1 3460313 R 326423 CDS YP_001422903.1 154687742 5460149 complement(3460573..3461007) 1 NC_009725.1 hypothetical protein YwqH; hypothetical protein 3461007 ywqH 5460149 ywqH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422903.1 3460573 R 326423 CDS YP_001422904.1 154687743 5460150 complement(3461288..3462076) 1 NC_009725.1 conserved hypothetical protein YwqG; hypothetical protein 3462076 ywqG 5460150 ywqG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422904.1 3461288 R 326423 CDS YP_001422905.1 154687744 5461020 complement(3462140..3463465) 1 NC_009725.1 NDP-sugar dehydrogenase homolog YwqF; hypothetical protein 3463465 ywqF 5461020 ywqF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422905.1 3462140 R 326423 CDS YP_001422906.1 154687745 5461021 complement(3463665..3464429) 1 NC_009725.1 tyrosine-protein phosphatase YwqE; hypothetical protein 3464429 ywqE 5461021 ywqE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422906.1 3463665 R 326423 CDS YP_001422907.1 154687746 5461022 complement(3464475..3465164) 1 NC_009725.1 tyrosine-protein kinase YwqD; hypothetical protein 3465164 ywqD 5461022 ywqD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422907.1 3464475 R 326423 CDS YP_001422908.1 154687747 5461023 complement(3465151..3465897) 1 NC_009725.1 conserved hypothetical protein YwqC; hypothetical protein 3465897 ywqC 5461023 ywqC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422908.1 3465151 R 326423 CDS YP_001422909.1 154687748 5461024 3466460..3468070 1 NC_009725.1 conserved hypothetical protein YwqB; hypothetical protein 3468070 ywqB 5461024 ywqB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422909.1 3466460 D 326423 CDS YP_001422910.1 154687749 5461025 3468057..3470831 1 NC_009725.1 conserved hypothetical protein YwqA; hypothetical protein 3470831 ywqA 5461025 ywqA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422910.1 3468057 D 326423 CDS YP_001422911.1 154687750 5461026 complement(3470944..3471801) 1 NC_009725.1 conserved hypothetical protein YwpJ; hypothetical protein 3471801 ywpJ 5461026 ywpJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422911.1 3470944 R 326423 CDS YP_001422912.1 154687751 5460424 complement(3471798..3472580) 1 NC_009725.1 transcriptional regulator (DeoR family) GlcR; GlcR 3472580 glcR 5460424 glcR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GlcR YP_001422912.1 3471798 R 326423 CDS YP_001422913.1 154687752 5460425 complement(3472789..3473130) 1 NC_009725.1 single-strand DNA-binding protein YwpH; hypothetical protein 3473130 ywpH 5460425 ywpH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422913.1 3472789 R 326423 CDS YP_001422914.1 154687753 5460426 complement(3473228..3473581) 1 NC_009725.1 hypothetical protein YwpG; hypothetical protein 3473581 ywpG 5460426 ywpG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422914.1 3473228 R 326423 CDS YP_001422915.1 154687754 5460427 3473754..3474164 1 NC_009725.1 hypothetical protein YwpF; hypothetical protein 3474164 ywpF 5460427 ywpF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422915.1 3473754 D 326423 CDS YP_001422916.1 154687755 5460428 complement(3474212..3474607) 1 NC_009725.1 homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel 3474607 mscL 5460428 mscL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 large-conductance mechanosensitive channel YP_001422916.1 3474212 R 326423 CDS YP_001422917.1 154687756 5460429 complement(3474663..3475088) 1 NC_009725.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 3475088 fabZ 5460429 fabZ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 (3R)-hydroxymyristoyl-ACP dehydratase YP_001422917.1 3474663 R 326423 CDS YP_001422918.1 154687757 5460430 3475284..3476348 1 NC_009725.1 response regulator aspartate phosphatase D (RapD); RapD 3476348 rapD 5460430 rapD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 RapD YP_001422918.1 3475284 D 326423 CDS YP_001422919.1 154687758 5461665 complement(3476366..3477187) 1 NC_009725.1 flagellar hook-basal body complex protein FlhP; FlhP 3477187 flhP 5461665 flhP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 FlhP YP_001422919.1 3476366 R 326423 CDS YP_001422920.1 154687759 5461666 complement(3477212..3478009) 1 NC_009725.1 flagellar hook-basal body complex protein FlhO; FlhO 3478009 flhO 5461666 flhO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 FlhO YP_001422920.1 3477212 R 326423 CDS YP_001422921.1 154687760 5461667 complement(3478169..3479170) 1 NC_009725.1 mreB-like protein Mbl; rod shape-determining protein Mbl 3479170 mbl 5461667 mbl Bacillus amyloliquefaciens subsp. plantarum str. FZB42 rod shape-determining protein Mbl YP_001422921.1 3478169 R 326423 CDS YP_001422922.1 154687761 5461668 complement(3479351..3479632) 1 NC_009725.1 stage III sporulation protein D (SpoIIID); SpoIIID 3479632 spoIIID 5461668 spoIIID Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SpoIIID YP_001422922.1 3479351 R 326423 CDS YP_001422923.1 154687762 5461669 3479964..3480377 1 NC_009725.1 transcriptional regulator YwoH; hypothetical protein 3480377 ywoH 5461669 ywoH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422923.1 3479964 D 326423 CDS YP_001422924.1 154687763 5461670 3480402..3481598 1 NC_009725.1 transporter YwoG; hypothetical protein 3481598 ywoG 5461670 ywoG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422924.1 3480402 D 326423 CDS YP_001422925.1 154687764 5461671 complement(3481634..3483088) 1 NC_009725.1 allantoin permease (Allantoin transportprotein) YwoE; hypothetical protein 3483088 ywoE 5461671 ywoE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422925.1 3481634 R 326423 CDS YP_001422926.1 154687765 5462740 complement(3483253..3484617) 1 NC_009725.1 conserved hypothetical protein YwoD; hypothetical protein 3484617 ywoD 5462740 ywoD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422926.1 3483253 R 326423 CDS YP_001422927.1 154687766 5462741 complement(3484614..3485180) 1 NC_009725.1 isochorismatase YwoC; hypothetical protein 3485180 ywoC 5462741 ywoC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422927.1 3484614 R 326423 CDS YP_001422928.1 154687767 5462742 3485433..3486644 1 NC_009725.1 ammonium transporter NrgA; NrgA 3486644 nrgA 5462742 nrgA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 NrgA YP_001422928.1 3485433 D 326423 CDS YP_001422929.1 154687768 5462743 3486662..3487012 1 NC_009725.1 nitrogen-regulated PII-like protein NrgB; NrgB 3487012 nrgB 5462743 nrgB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 NrgB YP_001422929.1 3486662 D 326423 CDS YP_001422930.1 154687769 5462744 complement(3487064..3488218) 1 NC_009725.1 cell-division protein 3488218 5462744 RBAM_033700 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 cell-division protein YP_001422930.1 3487064 R 326423 CDS YP_001422931.1 154687770 5462745 3488383..3488958 1 NC_009725.1 conserved hypothetical protein YwoA; hypothetical protein 3488958 ywoA 5462745 ywoA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422931.1 3488383 D 326423 CDS YP_001422932.1 154687771 5462746 complement(3488976..3489398) 1 NC_009725.1 conserved hypothetical protein YwnJ; hypothetical protein 3489398 ywnJ 5462746 ywnJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422932.1 3488976 R 326423 CDS YP_001422933.1 154687772 5461311 complement(3489490..3490359) 1 NC_009725.1 stage II sporulation protein Q (SpoIIQ); SpoIIQ 3490359 spoIIQ 5461311 spoIIQ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SpoIIQ YP_001422933.1 3489490 R 326423 CDS YP_001422934.1 154687773 5461312 3490492..3490989 1 NC_009725.1 phosphinothricin N-acetyltransferase YwnH; hypothetical protein 3490989 ywnH 5461312 ywnH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422934.1 3490492 D 326423 CDS YP_001422935.1 154687774 5461313 3490986..3491435 1 NC_009725.1 hypothetical protein YwnG; hypothetical protein 3491435 ywnG 5461313 ywnG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422935.1 3490986 D 326423 CDS YP_001422936.1 154687775 5461314 complement(3491467..3491904) 1 NC_009725.1 hypothetical protein YwnF; hypothetical protein 3491904 ywnF 5461314 ywnF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422936.1 3491467 R 326423 CDS YP_001422937.1 154687776 5461315 3492125..3493573 1 NC_009725.1 conserved hypothetical protein YwnE; hypothetical protein 3493573 ywnE 5461315 ywnE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422937.1 3492125 D 326423 CDS YP_001422938.1 154687777 5461316 3493709..3494095 1 NC_009725.1 hypothetical protein YwnC; hypothetical protein 3494095 ywnC 5461316 ywnC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422938.1 3493709 D 326423 CDS YP_001422939.1 154687778 5461317 3494569..3495210 1 NC_009725.1 endo-1,4-beta-xylanase A precursor; hypothetical protein 3495210 xynA 5461317 xynA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422939.1 3494569 D 326423 CDS YP_001422940.1 154687779 5460743 complement(3495542..3495946) 1 NC_009725.1 conserved hypothetical protein YwnA; hypothetical protein 3495946 ywnA 5460743 ywnA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422940.1 3495542 R 326423 CDS YP_001422941.1 154687780 5460744 complement(3496087..3497796) 1 NC_009725.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; urease subunit alpha 3497796 ureC 5460744 ureC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 urease subunit alpha YP_001422941.1 3496087 R 326423 CDS YP_001422942.1 154687781 5460745 complement(3497793..3498167) 1 NC_009725.1 urease (beta subunit) UreB; UreB 3498167 ureB 5460745 ureB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 UreB YP_001422942.1 3497793 R 326423 CDS YP_001422943.1 154687782 5460746 complement(3498164..3498481) 1 NC_009725.1 UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter; urease subunit gamma 3498481 ureA 5460746 ureA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 urease subunit gamma YP_001422943.1 3498164 R 326423 CDS YP_001422944.1 154687783 5460747 complement(3498835..3499023) 1 NC_009725.1 stress response protein CsbD; hypothetical protein 3499023 csbD 5460747 csbD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422944.1 3498835 R 326423 CDS YP_001422945.1 154687784 5460748 complement(3499098..3499577) 1 NC_009725.1 hypothetical protein YwmF; hypothetical protein 3499577 ywmF 5460748 ywmF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422945.1 3499098 R 326423 CDS YP_001422946.1 154687785 5460749 complement(3499699..3500829) 1 NC_009725.1 aspartate phosphatase response regulator RapB; RapB 3500829 rapB 5460749 rapB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 RapB YP_001422946.1 3499699 R 326423 CDS YP_001422947.1 154687786 5461474 complement(3501020..3502045) 1 NC_009725.1 together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 3502045 moaA 5461474 moaA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 molybdenum cofactor biosynthesis protein A YP_001422947.1 3501020 R 326423 CDS YP_001422948.1 154687787 5461475 complement(3502063..3502851) 1 NC_009725.1 involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth; formate dehydrogenase accessory protein 3502851 fdhD 5461475 fdhD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 formate dehydrogenase accessory protein YP_001422948.1 3502063 R 326423 CDS YP_001422949.1 154687788 5461476 complement(3503196..3503876) 1 NC_009725.1 conserved hypothetical protein YwmD; hypothetical protein 3503876 ywmD 5461476 ywmD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422949.1 3503196 R 326423 CDS YP_001422950.1 154687789 5461477 complement(3504186..3504872) 1 NC_009725.1 conserved hypothetical protein YwmC; hypothetical protein 3504872 ywmC 5461477 ywmC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422950.1 3504186 R 326423 CDS YP_001422951.1 154687790 5461478 complement(3505137..3506168) 1 NC_009725.1 stage II sporulation protein D (SpoIID); hypothetical protein 3506168 spoIID 5461478 spoIID Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422951.1 3505137 R 326423 CDS YP_001422952.1 154687791 5461479 complement(3506368..3507678) 1 NC_009725.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 3507678 murAA 5461479 murAA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_001422952.1 3506368 R 326423 CDS YP_001422953.1 154687792 5461480 complement(3507712..3508452) 1 NC_009725.1 hypothetical protein YwmB; hypothetical protein 3508452 ywmB 5461480 ywmB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422953.1 3507712 R 326423 CDS YP_001422954.1 154687793 5460913 complement(3508594..3508824) 1 NC_009725.1 hypothetical protein YwzB; hypothetical protein 3508824 ywzB 5460913 ywzB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422954.1 3508594 R 326423 CDS YP_001422955.1 154687794 5460914 3508997..3509467 1 NC_009725.1 hypothetical protein YwmA; hypothetical protein 3509467 ywmA 5460914 ywmA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422955.1 3508997 D 326423 CDS YP_001422956.1 154687795 5460915 complement(3509512..3509910) 1 NC_009725.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon 3509910 atpC 5460915 atpC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 F0F1 ATP synthase subunit epsilon YP_001422956.1 3509512 R 326423 CDS YP_001422957.1 154687796 5460916 complement(3509934..3511355) 1 NC_009725.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 3511355 atpD 5460916 atpD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 F0F1 ATP synthase subunit beta YP_001422957.1 3509934 R 326423 CDS YP_001422958.1 154687797 5460917 complement(3511381..3512244) 1 NC_009725.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 3512244 atpG 5460917 atpG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 F0F1 ATP synthase subunit gamma YP_001422958.1 3511381 R 326423 CDS YP_001422959.1 154687798 5460918 complement(3512320..3513828) 1 NC_009725.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 3513828 atpA 5460918 atpA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 F0F1 ATP synthase subunit alpha YP_001422959.1 3512320 R 326423 CDS YP_001422960.1 154687799 5460919 complement(3513845..3514390) 1 NC_009725.1 Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta 3514390 atpH 5460919 atpH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 F0F1 ATP synthase subunit delta YP_001422960.1 3513845 R 326423 CDS YP_001422961.1 154687800 5462348 complement(3514387..3514899) 1 NC_009725.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B 3514899 atpF 5462348 atpF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 F0F1 ATP synthase subunit B YP_001422961.1 3514387 R 326423 CDS YP_001422962.1 154687801 5462349 complement(3515042..3515254) 1 NC_009725.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 3515254 atpE 5462349 atpE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 F0F1 ATP synthase subunit C YP_001422962.1 3515042 R 326423 CDS YP_001422963.1 154687802 5462350 complement(3515300..3516034) 1 NC_009725.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 3516034 atpB 5462350 atpB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 F0F1 ATP synthase subunit A YP_001422963.1 3515300 R 326423 CDS YP_001422964.1 154687803 5462351 complement(3516042..3516425) 1 NC_009725.1 ATP synthase (subunit I) AtpI; AtpI 3516425 atpI 5462351 atpI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 AtpI YP_001422964.1 3516042 R 326423 CDS YP_001422965.1 154687804 5462352 complement(3516844..3517473) 1 NC_009725.1 Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase 3517473 upp 5462352 upp Bacillus amyloliquefaciens subsp. plantarum str. FZB42 uracil phosphoribosyltransferase YP_001422965.1 3516844 R 326423 CDS YP_001422966.1 154687805 5462353 complement(3517608..3518855) 1 NC_009725.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 3518855 glyA 5462353 glyA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 serine hydroxymethyltransferase YP_001422966.1 3517608 R 326423 CDS YP_001422967.1 154687806 5462354 complement(3519003..3519545) 1 NC_009725.1 conserved hypothetical protein YwlG; hypothetical protein 3519545 ywlG 5462354 ywlG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422967.1 3519003 R 326423 CDS YP_001422968.1 154687807 5460411 complement(3519559..3520008) 1 NC_009725.1 catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity; ribose-5-phosphate isomerase B 3520008 ywlF 5460411 ywlF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ribose-5-phosphate isomerase B YP_001422968.1 3519559 R 326423 CDS YP_001422969.1 154687808 5460412 complement(3520142..3520597) 1 NC_009725.1 low molecular weight phosphatase YwlE; hypothetical protein 3520597 ywlE 5460412 ywlE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422969.1 3520142 R 326423 CDS YP_001422970.1 154687809 5460413 complement(3520671..3521228) 1 NC_009725.1 conserved hypothetical protein YwlD; hypothetical protein 3521228 ywlD 5460413 ywlD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422970.1 3520671 R 326423 CDS YP_001422971.1 154687810 5460414 complement(3521297..3522337) 1 NC_009725.1 conserved hypothetical protein YwlC; hypothetical protein 3522337 ywlC 5460414 ywlC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422971.1 3521297 R 326423 CDS YP_001422972.1 154687811 5460415 complement(3522494..3522937) 1 NC_009725.1 conserved hypothetical protein YwlB; hypothetical protein 3522937 ywlB 5460415 ywlB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422972.1 3522494 R 326423 CDS YP_001422973.1 154687812 5460416 complement(3523008..3523688) 1 NC_009725.1 stage II sporulation protein R (SpoIIR); SpoIIR 3523688 spoIIR 5460416 spoIIR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SpoIIR YP_001422973.1 3523008 R 326423 CDS YP_001422974.1 154687813 5460417 3523849..3524223 1 NC_009725.1 conserved hypothetical protein YwlA; hypothetical protein 3524223 ywlA 5460417 ywlA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422974.1 3523849 D 326423 CDS YP_001422975.1 154687814 5459982 complement(3524210..3524488) 1 NC_009725.1 hypothetical protein YwkF; hypothetical protein 3524488 ywkF 5459982 ywkF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422975.1 3524210 R 326423 CDS YP_001422976.1 154687815 5459983 complement(3524559..3525419) 1 NC_009725.1 hemK protein homolog YwkE; hypothetical protein 3525419 ywkE 5459983 ywkE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422976.1 3524559 R 326423 CDS YP_001422977.1 154687816 5459984 complement(3525421..3526500) 1 NC_009725.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 3526500 prfA 5459984 prfA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 peptide chain release factor 1 YP_001422977.1 3525421 R 326423 CDS YP_001422978.1 154687817 5459985 3526603..3526986 1 NC_009725.1 conserved hypothetical protein YwkD; hypothetical protein 3526986 ywkD 5459985 ywkD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422978.1 3526603 D 326423 CDS YP_001422979.1 154687818 5459986 3527096..3527659 1 NC_009725.1 remodeling and anchoring of the chromosome protein; in Bacillus subtilis this protein functions in polar chromosome segregation during sporulation; binds inverted sequence motifs called ram along the chromosome; condenses DNA via RacA-RacA interactions; polar chromosome segregation protein 3527659 racA 5459986 racA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 polar chromosome segregation protein YP_001422979.1 3527096 D 326423 CDS YP_001422980.1 154687819 5459987 complement(3527693..3528649) 1 NC_009725.1 hypothetical protein YwkB; hypothetical protein 3528649 ywkB 5459987 ywkB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422980.1 3527693 R 326423 CDS YP_001422981.1 154687820 5459988 complement(3528736..3530433) 1 NC_009725.1 malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate; malate dehydrogenase 3530433 ywkA 5459988 ywkA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 malate dehydrogenase YP_001422981.1 3528736 R 326423 CDS YP_001422982.1 154687821 5459669 complement(3530717..3531301) 1 NC_009725.1 catalyzes the formation of thymidine 5'-phosphate from thymidine; thymidine kinase 3531301 tdk 5459669 tdk Bacillus amyloliquefaciens subsp. plantarum str. FZB42 thymidine kinase YP_001422982.1 3530717 R 326423 CDS YP_001422983.1 154687822 5459670 complement(3531386..3531586) 1 NC_009725.1 RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 3531586 rpmE 5459670 rpmE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 50S ribosomal protein L31 YP_001422983.1 3531386 R 326423 CDS YP_001422984.1 154687823 5459671 complement(3531708..3532994) 1 NC_009725.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 3532994 rho 5459671 rho Bacillus amyloliquefaciens subsp. plantarum str. FZB42 transcription termination factor Rho YP_001422984.1 3531708 R 326423 CDS YP_001422985.1 154687824 5459672 complement(3533401..3534366) 1 NC_009725.1 type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II 3534366 glpX 5459672 glpX Bacillus amyloliquefaciens subsp. plantarum str. FZB42 fructose 1,6-bisphosphatase II YP_001422985.1 3533401 R 326423 CDS YP_001422986.1 154687825 5459673 complement(3534400..3535689) 1 NC_009725.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 3535689 murAB 5459673 murAB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_001422986.1 3534400 R 326423 CDS YP_001422987.1 154687826 5459674 complement(3535999..3536637) 1 NC_009725.1 similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity; translaldolase 3536637 tal 5459674 tal Bacillus amyloliquefaciens subsp. plantarum str. FZB42 translaldolase YP_001422987.1 3535999 R 326423 CDS YP_001422988.1 154687827 5459675 complement(3536756..3537613) 1 NC_009725.1 catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate; induced by anaerobic conditions in Bacillus subtilis; fructose-bisphosphate aldolase 3537613 fbaA 5459675 fbaA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 fructose-bisphosphate aldolase YP_001422988.1 3536756 R 326423 CDS YP_001422989.1 154687828 5461558 complement(3537789..3538163) 1 NC_009725.1 sporulation initiation phosphotransferase F (Spo0F); Spo0F 3538163 spo0F 5461558 spo0F Bacillus amyloliquefaciens subsp. plantarum str. FZB42 Spo0F YP_001422989.1 3537789 R 326423 CDS YP_001422990.1 154687829 5461559 3538328..3538849 1 NC_009725.1 hypothetical protein YwjG; hypothetical protein 3538849 ywjG 5461559 ywjG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422990.1 3538328 D 326423 CDS YP_001422991.1 154687830 5461560 complement(3538897..3540504) 1 NC_009725.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 3540504 pyrG 5461560 pyrG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 CTP synthetase YP_001422991.1 3538897 R 326423 CDS YP_001422992.1 154687831 5461561 complement(3540745..3541272) 1 NC_009725.1 participates in both the initiation and recycling phases of transcription; in the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; DNA-directed RNA polymerase subunit delta 3541272 rpoE 5461561 rpoE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DNA-directed RNA polymerase subunit delta YP_001422992.1 3540745 R 326423 CDS YP_001422993.1 154687832 5461562 complement(3541500..3543608) 1 NC_009725.1 conserved hypothetical protein YwjF; hypothetical protein 3543608 ywjF 5461562 ywjF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422993.1 3541500 R 326423 CDS YP_001422994.1 154687833 5461563 3543747..3544946 1 NC_009725.1 conserved hypothetical protein YwjE; hypothetical protein 3544946 ywjE 5461563 ywjE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422994.1 3543747 D 326423 CDS YP_001422995.1 154687834 5461564 3544959..3545921 1 NC_009725.1 UV DNA damage endonuclease UvsE; UV damage endonuclease 3545921 uvsE 5461564 uvsE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 UV damage endonuclease YP_001422995.1 3544959 D 326423 CDS YP_001422996.1 154687835 5462674 3545990..3546262 1 NC_009725.1 hypothetical protein YwjC; hypothetical protein 3546262 ywjC 5462674 ywjC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422996.1 3545990 D 326423 CDS YP_001422997.1 154687836 5462675 complement(3546333..3548057) 1 NC_009725.1 ABC transporter ATP-binding protein YwjA; hypothetical protein 3548057 ywjA 5462675 ywjA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422997.1 3546333 R 326423 CDS YP_001422998.1 154687837 5462676 complement(3548138..3549703) 1 NC_009725.1 cardiolipin synthetase YwiE; hypothetical protein 3549703 ywiE 5462676 ywiE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422998.1 3548138 R 326423 CDS YP_001422999.1 154687838 5462677 complement(3549736..3550365) 1 NC_009725.1 hypothetical protein 3550365 5462677 RBAM_034390 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001422999.1 3549736 R 326423 CDS YP_001423000.1 154687839 5462678 complement(3550505..3551176) 1 NC_009725.1 nitrate reductase (gamma subunit) NarI; NarI 3551176 narI 5462678 narI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 NarI YP_001423000.1 3550505 R 326423 CDS YP_001423001.1 154687840 5462679 complement(3551173..3551730) 1 NC_009725.1 nitrate reductase delta chain NarJ; NarJ 3551730 narJ 5462679 narJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 NarJ YP_001423001.1 3551173 R 326423 CDS YP_001423002.1 154687841 5462680 complement(3551756..3553195) 1 NC_009725.1 nitrate reductase beta chain NarH; NarH 3553195 narH 5462680 narH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 NarH YP_001423002.1 3551756 R 326423 CDS YP_001423003.1 154687842 5460391 complement(3553209..3556895) 1 NC_009725.1 nitrate reductase alpha chain NarG; NarG 3556895 narG 5460391 narG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 NarG YP_001423003.1 3553209 R 326423 CDS YP_001423004.1 154687843 5460392 complement(3557073..3557549) 1 NC_009725.1 transcriptional regulator ArfM; ArfM 3557549 arfM 5460392 arfM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ArfM YP_001423004.1 3557073 R 326423 CDS YP_001423005.1 154687844 5460393 3557692..3558411 1 NC_009725.1 hypothetical protein YwiC; hypothetical protein 3558411 ywiC 5460393 ywiC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423005.1 3557692 D 326423 CDS YP_001423006.1 154687845 5460394 complement(3558443..3559159) 1 NC_009725.1 anaerobic regulatory protein Fnr; Fnr 3559159 fnr 5460394 fnr Bacillus amyloliquefaciens subsp. plantarum str. FZB42 Fnr YP_001423006.1 3558443 R 326423 CDS YP_001423007.1 154687846 5460395 complement(3559257..3560447) 1 NC_009725.1 nitrite extrusion protein NarK; hypothetical protein 3560447 narK 5460395 narK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423007.1 3559257 R 326423 CDS YP_001423008.1 154687847 5460396 complement(3560581..3562251) 1 NC_009725.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 3562251 argS 5460396 argS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 arginyl-tRNA synthetase YP_001423008.1 3560581 R 326423 CDS YP_001423009.1 154687848 5460397 complement(3562248..3562676) 1 NC_009725.1 conserved hypothetical protein YwiB; hypothetical protein 3562676 ywiB 5460397 ywiB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423009.1 3562248 R 326423 CDS YP_001423010.1 154687849 5462774 3562857..3563405 1 NC_009725.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG; AlbG 3563405 albG 5462774 albG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 AlbG YP_001423010.1 3562857 D 326423 CDS YP_001423011.1 154687850 5462775 complement(3563348..3564724) 1 NC_009725.1 conserved hypothetical protein YwhL; hypothetical protein 3564724 ywhL 5462775 ywhL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423011.1 3563348 R 326423 CDS YP_001423012.1 154687851 5462776 complement(3564764..3566119) 1 NC_009725.1 conserved hypothetical protein YwhK; hypothetical protein 3566119 ywhK 5462776 ywhK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423012.1 3564764 R 326423 CDS YP_001423013.1 154687852 5462777 3566350..3567495 1 NC_009725.1 response regulator aspartate phosphatase RapF; RapF 3567495 rapF 5462777 rapF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 RapF YP_001423013.1 3566350 D 326423 CDS YP_001423014.1 154687853 5462778 3567479..3567598 1 NC_009725.1 phosphatase rapF inhibitor PhrF; PhrF 3567598 phrF 5462778 phrF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 PhrF YP_001423014.1 3567479 D 326423 CDS YP_001423015.1 154687854 5462779 3567796..3567999 1 NC_009725.1 transcriptional regulator 3567999 5462779 RBAM_034550 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 transcriptional regulator YP_001423015.1 3567796 D 326423 CDS YP_001423016.1 154687855 5462780 3568013..3568216 1 NC_009725.1 hypothetical protein 3568216 5462780 RBAM_034560 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423016.1 3568013 D 326423 CDS YP_001423017.1 154687856 5462559 3568251..3568436 1 NC_009725.1 hypothetical protein 3568436 5462559 RBAM_034570 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423017.1 3568251 D 326423 CDS YP_001423018.1 154687857 5462560 3568622..3568903 1 NC_009725.1 hypothetical protein 3568903 5462560 RBAM_034580 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423018.1 3568622 D 326423 CDS YP_001423019.1 154687858 5462561 3568962..3569459 1 NC_009725.1 hypothetical protein 3569459 5462561 RBAM_034590 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423019.1 3568962 D 326423 CDS YP_001423020.1 154687859 5462562 3569464..3570003 1 NC_009725.1 hypothetical protein 3570003 5462562 RBAM_034600 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423020.1 3569464 D 326423 CDS YP_001423021.1 154687860 5462563 complement(3570436..3571308) 1 NC_009725.1 agmatinase (Agmatine ureohydrolase) (AUH) SpeB; hypothetical protein 3571308 speB 5462563 speB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423021.1 3570436 R 326423 CDS YP_001423022.1 154687861 5462564 complement(3571367..3572197) 1 NC_009725.1 catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase 3572197 speE 5462564 speE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 spermidine synthase YP_001423022.1 3571367 R 326423 CDS YP_001423023.1 154687862 5462565 3572397..3574469 1 NC_009725.1 penicillin-binding protein YwhE; hypothetical protein 3574469 ywhE 5462565 ywhE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423023.1 3572397 D 326423 CDS YP_001423024.1 154687863 5463122 complement(3574494..3574925) 1 NC_009725.1 hypothetical protein 3574925 5463122 RBAM_034640 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423024.1 3574494 R 326423 CDS YP_001423025.1 154687864 5463123 complement(3575069..3575587) 1 NC_009725.1 hypothetical protein YwhD; hypothetical protein 3575587 ywhD 5463123 ywhD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423025.1 3575069 R 326423 CDS YP_001423026.1 154687865 5463124 complement(3575600..3576259) 1 NC_009725.1 conserved hypothetical protein YwhC; hypothetical protein 3576259 ywhC 5463124 ywhC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423026.1 3575600 R 326423 CDS YP_001423027.1 154687866 5463125 3576365..3576553 1 NC_009725.1 tautomerase YwhB; hypothetical protein 3576553 ywhB 5463125 ywhB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423027.1 3576365 D 326423 CDS YP_001423028.1 154687867 5463126 complement(3576591..3577010) 1 NC_009725.1 transcription regulator YwhA; hypothetical protein 3577010 ywhA 5463126 ywhA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423028.1 3576591 R 326423 CDS YP_001423029.1 154687868 5463127 3577392..3578774 1 NC_009725.1 amino acid transporter 3578774 5463127 RBAM_034690 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 amino acid transporter YP_001423029.1 3577392 D 326423 CDS YP_001423030.1 154687869 5463128 complement(3578839..3579336) 1 NC_009725.1 conserved hypothetical protein YwgA; hypothetical protein 3579336 ywgA 5463128 ywgA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423030.1 3578839 R 326423 CDS YP_001423031.1 154687870 5462910 complement(3579379..3580680) 1 NC_009725.1 conserved hypothetical protein YwfO; hypothetical protein 3580680 ywfO 5462910 ywfO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423031.1 3579379 R 326423 CDS YP_001423032.1 154687871 5462911 complement(3580840..3581064) 1 NC_009725.1 hypothetical protein YwzC; hypothetical protein 3581064 ywzC 5462911 ywzC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423032.1 3580840 R 326423 CDS YP_001423033.1 154687872 5462912 3581267..3582040 1 NC_009725.1 prespore specific transcriptional regulator RsfA; RsfA 3582040 rsfA 5462912 rsfA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 RsfA YP_001423033.1 3581267 D 326423 CDS YP_001423034.1 154687873 5462913 3582301..3582615 1 NC_009725.1 hypothetical protein 3582615 5462913 RBAM_034740 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423034.1 3582301 D 326423 CDS YP_001423035.1 154687874 5462914 3582616..3583170 1 NC_009725.1 hypothetical protein 3583170 5462914 RBAM_034750 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423035.1 3582616 D 326423 CDS YP_001423036.1 154687875 5462915 3583268..3584188 1 NC_009725.1 ABC transporter ATP-binding protein 3584188 5462915 RBAM_034760 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ABC transporter ATP-binding protein YP_001423036.1 3583268 D 326423 CDS YP_001423037.1 154687876 5462916 3584185..3585138 1 NC_009725.1 hypothetical protein 3585138 5462916 RBAM_034770 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423037.1 3584185 D 326423 CDS YP_001423038.1 154687877 5461887 complement(3585128..3585964) 1 NC_009725.1 hypothetical protein 3585964 5461887 RBAM_034780 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423038.1 3585128 R 326423 CDS YP_001423039.1 154687878 5461888 complement(3585955..3586719) 1 NC_009725.1 hypothetical protein 3586719 5461888 RBAM_034790 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423039.1 3585955 R 326423 CDS YP_001423040.1 154687879 5461889 complement(3586721..3587680) 1 NC_009725.1 hypothetical protein 3587680 5461889 RBAM_034800 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423040.1 3586721 R 326423 CDS YP_001423041.1 154687880 5461890 complement(3587693..3587872) 1 NC_009725.1 hypothetical protein 3587872 5461890 RBAM_034810 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423041.1 3587693 R 326423 CDS YP_001423042.1 154687881 5461891 complement(3588025..3588888) 1 NC_009725.1 conserved hypothetical protein YwfL; hypothetical protein 3588888 ywfL 5461891 ywfL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423042.1 3588025 R 326423 CDS YP_001423043.1 154687882 5461892 complement(3588935..3589834) 1 NC_009725.1 transcription regulator, LysR family YwfK; hypothetical protein 3589834 ywfK 5461892 ywfK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423043.1 3588935 R 326423 CDS YP_001423044.1 154687883 5461893 3589950..3590927 1 NC_009725.1 hypothetical protein 3590927 5461893 RBAM_034840 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423044.1 3589950 D 326423 CDS YP_001423045.1 154687884 5461900 complement(3590964..3591935) 1 NC_009725.1 in Salmonella this enzyme is required for ethanolamine catabolism; has higher affinity for CoA than Pta; phosphotransacetylase 3591935 eutD 5461900 eutD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 phosphotransacetylase YP_001423045.1 3590964 R 326423 CDS YP_001423046.1 154687885 5461901 3592197..3592961 1 NC_009725.1 conserved hypothetical protein YwfI; heme peroxidase 3592961 ywfI 5461901 ywfI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 heme peroxidase YP_001423046.1 3592197 D 326423 CDS YP_001423047.1 154687886 5461902 3593081..3593860 1 NC_009725.1 oxidoreductase YwfH; hypothetical protein 3593860 ywfH 5461902 ywfH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423047.1 3593081 D 326423 CDS YP_001423048.1 154687887 5461903 complement(3593877..3595076) 1 NC_009725.1 produces methionine from 2-keto-4-methylthiobutyrate and glutamine in vitro; mutations do not affect methionine salvage in vivo however; transaminase 3595076 ywfG 5461903 ywfG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 transaminase YP_001423048.1 3593877 R 326423 CDS YP_001423049.1 154687888 5461904 complement(3595089..3596270) 1 NC_009725.1 anticapsin/bacilysin excretion protein; BacE 3596270 bacE 5461904 bacE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 BacE YP_001423049.1 3595089 R 326423 CDS YP_001423050.1 154687889 5461905 complement(3596267..3597685) 1 NC_009725.1 L-amino acid ligase; COG0439; bacilysin synthesis; BacD 3597685 bacD 5461905 bacD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 BacD YP_001423050.1 3596267 R 326423 CDS YP_001423051.1 154687890 5461906 complement(3597703..3598464) 1 NC_009725.1 bacilysin synthesis; COG1028; bacilysin synthetase C; BacC 3598464 bacC 5461906 bacC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 BacC YP_001423051.1 3597703 R 326423 CDS YP_001423052.1 154687891 5461926 complement(3598461..3599174) 1 NC_009725.1 bacilysin biosynthesis; COG1917; bacilysin synthetase B; BacB 3599174 bacB 5461926 bacB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 BacB YP_001423052.1 3598461 R 326423 CDS YP_001423053.1 154687892 5461927 complement(3599161..3599784) 1 NC_009725.1 bacilysin biosynthesis; pfam00800; bacilysin synthetase A; hypothetical protein 3599784 bacA 5461927 bacA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423053.1 3599161 R 326423 CDS YP_001423054.1 154687893 5461928 complement(3599936..3601174) 1 NC_009725.1 conserved hypothetical protein YwfA; hypothetical protein 3601174 ywfA 5461928 ywfA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423054.1 3599936 R 326423 CDS YP_001423055.1 154687894 5461929 3601397..3602599 1 NC_009725.1 drug resistance transporter 3602599 5461929 RBAM_034950 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 drug resistance transporter YP_001423055.1 3601397 D 326423 CDS YP_001423056.1 154687895 5461930 complement(3602632..3604050) 1 NC_009725.1 amino acid permease RocC; RocC 3604050 rocC 5461930 rocC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 RocC YP_001423056.1 3602632 R 326423 CDS YP_001423057.1 154687896 5461931 complement(3604075..3605757) 1 NC_009725.1 arginine degradation protein RocB; RocB 3605757 rocB 5461931 rocB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 RocB YP_001423057.1 3604075 R 326423 CDS YP_001423058.1 154687897 5461932 complement(3605829..3607376) 1 NC_009725.1 catalyzes the conversion of 1-proline-5-carboxylate dehydrogenase to L-glutamate; 1-pyrroline-5-carboxylate dehydrogenase 3607376 rocA 5461932 rocA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 1-pyrroline-5-carboxylate dehydrogenase YP_001423058.1 3605829 R 326423 CDS YP_001423059.1 154687898 5460330 complement(3607584..3608870) 1 NC_009725.1 NAD-specific glutamate dehydrogenase (NAD-GDH) RocG; RocG 3608870 rocG 5460330 rocG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 RocG YP_001423059.1 3607584 R 326423 CDS YP_001423060.1 154687899 5460331 complement(3609102..3610037) 1 NC_009725.1 two-component sensor histidine kinase 3610037 5460331 RBAM_035000 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 two-component sensor histidine kinase YP_001423060.1 3609102 R 326423 CDS YP_001423061.1 154687900 5460332 complement(3610039..3610737) 1 NC_009725.1 two-component response regulator 3610737 5460332 RBAM_035010 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 two-component response regulator YP_001423061.1 3610039 R 326423 CDS YP_001423062.1 154687901 5460333 complement(3610929..3611228) 1 NC_009725.1 hypothetical protein 3611228 5460333 RBAM_035020 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423062.1 3610929 R 326423 CDS YP_001423063.1 154687902 5460334 complement(3611307..3611795) 1 NC_009725.1 hypothetical protein 3611795 5460334 RBAM_035030 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423063.1 3611307 R 326423 CDS YP_001423064.1 154687903 5460335 complement(3611816..3612520) 1 NC_009725.1 hypothetical protein 3612520 5460335 RBAM_035040 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423064.1 3611816 R 326423 CDS YP_001423065.1 154687904 5460336 complement(3612585..3613529) 1 NC_009725.1 ABC transporter ATP-binding protein 3613529 5460336 RBAM_035050 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ABC transporter ATP-binding protein YP_001423065.1 3612585 R 326423 CDS YP_001423066.1 154687905 5461497 complement(3613860..3614321) 1 NC_009725.1 spore coat polysaccharide synthesis protein SpsL; SpsL 3614321 spsL 5461497 spsL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SpsL YP_001423066.1 3613860 R 326423 CDS YP_001423067.1 154687906 5461498 complement(3614312..3615160) 1 NC_009725.1 spore coat polysaccharide synthesis protei SpsK; SpsK 3615160 spsK 5461498 spsK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SpsK YP_001423067.1 3614312 R 326423 CDS YP_001423068.1 154687907 5461499 complement(3615181..3616128) 1 NC_009725.1 spore coat polysaccharide synthesis protein SpsJ; SpsJ 3616128 spsJ 5461499 spsJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SpsJ YP_001423068.1 3615181 R 326423 CDS YP_001423069.1 154687908 5461500 complement(3616131..3616868) 1 NC_009725.1 spore coat polysaccharide synthesis protein SpsI; SpsI 3616868 spsI 5461500 spsI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SpsI YP_001423069.1 3616131 R 326423 CDS YP_001423070.1 154687909 5461501 complement(3616896..3617900) 1 NC_009725.1 spore coat polysaccharide synthesis protein SpsG; SpsG 3617900 spsG 5461501 spsG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SpsG YP_001423070.1 3616896 R 326423 CDS YP_001423071.1 154687910 5461502 complement(3617902..3618645) 1 NC_009725.1 spore coat polysaccharide synthesis protein SpsF; SpsF 3618645 spsF 5461502 spsF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SpsF YP_001423071.1 3617902 R 326423 CDS YP_001423072.1 154687911 5461503 complement(3618635..3619756) 1 NC_009725.1 spore coat polysaccharide synthesis protein SpsE; SpsE 3619756 spsE 5461503 spsE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SpsE YP_001423072.1 3618635 R 326423 CDS YP_001423073.1 154687912 5462194 complement(3619756..3620619) 1 NC_009725.1 spore coat polysaccharide synthesis protein SpsD; SpsD 3620619 spsD 5462194 spsD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SpsD YP_001423073.1 3619756 R 326423 CDS YP_001423074.1 154687913 5462195 complement(3620620..3621789) 1 NC_009725.1 spore coat polysaccharide synthesis protein SpsC; SpsC 3621789 spsC 5462195 spsC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SpsC YP_001423074.1 3620620 R 326423 CDS YP_001423075.1 154687914 5462196 complement(3621812..3623236) 1 NC_009725.1 spore coat polysaccharide synthesis protein SpsB; SpsB 3623236 spsB 5462196 spsB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SpsB YP_001423075.1 3621812 R 326423 CDS YP_001423076.1 154687915 5462197 complement(3623241..3624011) 1 NC_009725.1 spore coat polysaccharide synthesis protein SpsA; SpsA 3624011 spsA 5462197 spsA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SpsA YP_001423076.1 3623241 R 326423 CDS YP_001423077.1 154687916 5462198 3624292..3624843 1 NC_009725.1 hypothetical protein YwdL; hypothetical protein 3624843 ywdL 5462198 ywdL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423077.1 3624292 D 326423 CDS YP_001423078.1 154687917 5462199 complement(3624890..3625261) 1 NC_009725.1 conserved hypothetical protein YwdK; hypothetical protein 3625261 ywdK 5462199 ywdK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423078.1 3624890 R 326423 CDS YP_001423079.1 154687918 5462200 complement(3625325..3626644) 1 NC_009725.1 purine permease YwdJ; hypothetical protein 3626644 ywdJ 5462200 ywdJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423079.1 3625325 R 326423 CDS YP_001423080.1 154687919 5463241 complement(3626663..3626989) 1 NC_009725.1 hypothetical protein YwdI; hypothetical protein 3626989 ywdI 5463241 ywdI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423080.1 3626663 R 326423 CDS YP_001423081.1 154687920 5463242 complement(3627145..3627828) 1 NC_009725.1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 3627828 ung 5463242 ung Bacillus amyloliquefaciens subsp. plantarum str. FZB42 uracil-DNA glycosylase YP_001423081.1 3627145 R 326423 CDS YP_001423082.1 154687921 5463243 complement(3627843..3628649) 1 NC_009725.1 glycosyl transferase YwdF; hypothetical protein 3628649 ywdF 5463243 ywdF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423082.1 3627843 R 326423 CDS YP_001423083.1 154687922 5463244 complement(3628734..3629261) 1 NC_009725.1 hypothetical protein YwdE; hypothetical protein 3629261 ywdE 5463244 ywdE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423083.1 3628734 R 326423 CDS YP_001423084.1 154687923 5463245 complement(3629306..3629797) 1 NC_009725.1 hypothetical protein YwdD; hypothetical protein 3629797 ywdD 5463245 ywdD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423084.1 3629306 R 326423 CDS YP_001423085.1 154687924 5463246 complement(3629934..3630272) 1 NC_009725.1 transcriptional regulator 3630272 5463246 RBAM_035250 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 transcriptional regulator YP_001423085.1 3629934 R 326423 CDS YP_001423086.1 154687925 5463247 3630422..3631234 1 NC_009725.1 catalyzes the phosphorylation of three vitamin B6 precursors, pyridoxal, pyridoxine and pyridoxamine; pyridoxal kinase 3631234 thiD 5463247 thiD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 pyridoxal kinase YP_001423086.1 3630422 D 326423 CDS YP_001423087.1 154687926 5459855 complement(3631266..3631505) 1 NC_009725.1 hypothetical protein YwdA; hypothetical protein 3631505 ywdA 5459855 ywdA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423087.1 3631266 R 326423 CDS YP_001423088.1 154687927 5459856 complement(3631605..3633044) 1 NC_009725.1 sucrase-6-phosphate hydrolase (Sucrase) (Invertase) SacA; SacA 3633044 sacA 5459856 sacA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SacA YP_001423088.1 3631605 R 326423 CDS YP_001423089.1 154687928 5459857 complement(3633041..3634423) 1 NC_009725.1 phosphotransferase system (PTS) sucrose-specificenzyme IIBC component SacP; SacP 3634423 sacP 5459857 sacP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SacP YP_001423089.1 3633041 R 326423 CDS YP_001423090.1 154687929 5459858 complement(3634644..3635474) 1 NC_009725.1 transcriptional antiterminator SacT; SacT 3635474 sacT 5459858 sacT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SacT YP_001423090.1 3634644 R 326423 CDS YP_001423091.1 154687930 5459859 complement(3635498..3635812) 1 NC_009725.1 hypothetical protein YwcI; hypothetical protein 3635812 ywcI 5459859 ywcI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423091.1 3635498 R 326423 CDS YP_001423092.1 154687931 5459860 3636338..3638749 1 NC_009725.1 minor extracellular protease Vpr; Vpr 3638749 vpr 5459860 vpr Bacillus amyloliquefaciens subsp. plantarum str. FZB42 Vpr YP_001423092.1 3636338 D 326423 CDS YP_001423093.1 154687932 5459861 complement(3638791..3639792) 1 NC_009725.1 conserved hypothetical protein YwcH; hypothetical protein 3639792 ywcH 5459861 ywcH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423093.1 3638791 R 326423 CDS YP_001423094.1 154687933 5461421 3640032..3640364 1 NC_009725.1 transposase 3640364 5461421 RBAM_035340 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 transposase YP_001423094.1 3640032 D 326423 CDS YP_001423095.1 154687934 5461422 3640370..3641182 1 NC_009725.1 transposase 3641182 5461422 RBAM_035350 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 transposase YP_001423095.1 3640370 D 326423 CDS YP_001423096.1 154687935 5461423 complement(3641244..3641993) 1 NC_009725.1 FMN-containing NADPH-linked nitro/flavin reductase NfrA; NfrA 3641993 nfrA 5461423 nfrA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 NfrA YP_001423096.1 3641244 R 326423 CDS YP_001423097.1 154687936 5461424 complement(3642096..3643283) 1 NC_009725.1 cell-division protein RodA; RodA 3643283 rodA 5461424 rodA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 RodA YP_001423097.1 3642096 R 326423 CDS YP_001423098.1 154687937 5461425 complement(3643485..3643943) 1 NC_009725.1 IAA-acetyl-transferase; involved in Trp dependent IAA synthesis. Mutant ysnE was found impaired in IAA production and plant growth promotion; hypothetical protein 3643943 ysnE 5461425 ysnE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423098.1 3643485 R 326423 CDS YP_001423099.1 154687938 5461426 3644236..3644496 1 NC_009725.1 hypothetical protein YwcE; hypothetical protein 3644496 ywcE 5461426 ywcE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423099.1 3644236 D 326423 CDS YP_001423100.1 154687939 5461427 complement(3644540..3644908) 1 NC_009725.1 quinol oxidase subunit IV QoxD; QoxD 3644908 qoxD 5461427 qoxD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 QoxD YP_001423100.1 3644540 R 326423 CDS YP_001423101.1 154687940 5462479 complement(3644910..3645524) 1 NC_009725.1 quinol oxidase subunit III QoxC; QoxC 3645524 qoxC 5462479 qoxC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 QoxC YP_001423101.1 3644910 R 326423 CDS YP_001423102.1 154687941 5462480 complement(3645539..3647488) 1 NC_009725.1 quinol oxidase polypeptide I QoxB; QoxB 3647488 qoxB 5462480 qoxB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 QoxB YP_001423102.1 3645539 R 326423 CDS YP_001423103.1 154687942 5462481 complement(3647516..3648481) 1 NC_009725.1 quinol oxidase subunit II precursor QoxA; QoxA 3648481 qoxA 5462481 qoxA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 QoxA YP_001423103.1 3647516 R 326423 CDS YP_001423104.1 154687943 5462482 3648984..3649229 1 NC_009725.1 hypothetical protein YdaS; hypothetical protein 3649229 ydaS 5462482 ydaS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423104.1 3648984 D 326423 CDS YP_001423105.1 154687944 5462483 complement(3649246..3650787) 1 NC_009725.1 catalyzes the formation of alpha-D-glucose 1-phosphate and UDP-galactose from UDP-glucose and alpha-D-galactose 1-phosphate in galactose metabolism; galactose-1-phosphate uridylyltransferase 3650787 galT 5462483 galT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 galactose-1-phosphate uridylyltransferase YP_001423105.1 3649246 R 326423 CDS YP_001423106.1 154687945 5462484 complement(3650777..3651961) 1 NC_009725.1 catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism; galactokinase 3651961 galK 5462484 galK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 galactokinase YP_001423106.1 3650777 R 326423 CDS YP_001423107.1 154687946 5462485 complement(3652013..3652420) 1 NC_009725.1 conserved hypothetical protein YwcD; hypothetical protein 3652420 ywcD 5462485 ywcD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423107.1 3652013 R 326423 CDS YP_001423108.1 154687947 5459638 complement(3652479..3653102) 1 NC_009725.1 conserved hypothetical protein YwcC; hypothetical protein 3653102 ywcC 5459638 ywcC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423108.1 3652479 R 326423 CDS YP_001423109.1 154687948 5459639 3653438..3653599 1 NC_009725.1 hypothetical protein 3653599 5459639 RBAM_035490 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423109.1 3653438 D 326423 CDS YP_001423110.1 154687949 5459640 3653816..3654496 1 NC_009725.1 hypothetical protein 3654496 5459640 RBAM_035500 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423110.1 3653816 D 326423 CDS YP_001423111.1 154687950 5459641 3654496..3655170 1 NC_009725.1 hypothetical protein 3655170 5459641 RBAM_035510 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423111.1 3654496 D 326423 CDS YP_001423112.1 154687951 5459642 complement(3655191..3655793) 1 NC_009725.1 conserved hypothetical protein YwbO; hypothetical protein 3655793 ywbO 5459642 ywbO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423112.1 3655191 R 326423 CDS YP_001423113.1 154687952 5459643 complement(3655879..3657135) 1 NC_009725.1 conserved hypothetical protein YwbN; hypothetical protein 3657135 ywbN 5459643 ywbN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423113.1 3655879 R 326423 CDS YP_001423114.1 154687953 5459644 complement(3657154..3657348) 1 NC_009725.1 hypothetical protein YwbM; hypothetical protein 3657348 ywbM 5459644 ywbM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423114.1 3657154 R 326423 CDS YP_001423115.1 154687954 5462270 complement(3657549..3658223) 1 NC_009725.1 Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate; thiamine-phosphate pyrophosphorylase 3658223 thiE 5462270 thiE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 thiamine-phosphate pyrophosphorylase YP_001423115.1 3657549 R 326423 CDS YP_001423116.1 154687955 5462271 complement(3658220..3659038) 1 NC_009725.1 catalyzes the formation of 4-methyl-5-(2-phosphoethyl)-thiazole and ADP from 4-methyl-5-(2-hydroxyethyl)-thiazole and ATP; hydroxyethylthiazole kinase 3659038 thiM 5462271 thiM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hydroxyethylthiazole kinase YP_001423116.1 3658220 R 326423 CDS YP_001423117.1 154687956 5462272 complement(3659041..3659949) 1 NC_009725.1 transcription regulator YwbI; hypothetical protein 3659949 ywbI 5462272 ywbI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423117.1 3659041 R 326423 CDS YP_001423118.1 154687957 5462273 3660056..3660442 1 NC_009725.1 increases the activity of extracellular murein hydrolases possibly by mediating their export via hole formation; inhibited by the antiholin-like proteins lrgAB; holin-like protein 3660442 ywbH 5462273 ywbH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 holin-like protein YP_001423118.1 3660056 D 326423 CDS YP_001423119.1 154687958 5462274 3660424..3661104 1 NC_009725.1 conserved hypothetical protein YwbG; hypothetical protein 3661104 ywbG 5462274 ywbG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423119.1 3660424 D 326423 CDS YP_001423120.1 154687959 5462275 3661224..3661427 1 NC_009725.1 conserved hypothetical protein YwbE; hypothetical protein 3661427 ywbE 5462275 ywbE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423120.1 3661224 D 326423 CDS YP_001423121.1 154687960 5462276 3661583..3662344 1 NC_009725.1 MerR family transcriptional regulator 3662344 5462276 RBAM_035610 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 MerR family transcriptional regulator YP_001423121.1 3661583 D 326423 CDS YP_001423122.1 154687961 5460508 3662331..3663233 1 NC_009725.1 Zn-dependent protease 3663233 5460508 RBAM_035620 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 Zn-dependent protease YP_001423122.1 3662331 D 326423 CDS YP_001423123.1 154687962 5460509 complement(3663316..3664503) 1 NC_009725.1 conserved hypothetical protein YwbD; hypothetical protein 3664503 ywbD 5460509 ywbD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423123.1 3663316 R 326423 CDS YP_001423124.1 154687963 5460510 3664598..3664981 1 NC_009725.1 conserved hypothetical protein YwbC; hypothetical protein 3664981 ywbC 5460510 ywbC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423124.1 3664598 D 326423 CDS YP_001423125.1 154687964 5460511 complement(3665009..3666343) 1 NC_009725.1 PTS system IIBC component YwbA; hypothetical protein 3666343 ywbA 5460511 ywbA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423125.1 3665009 R 326423 CDS YP_001423126.1 154687965 5460512 3666505..3668250 1 NC_009725.1 minor extracellular protease Epr precursor; hypothetical protein 3668250 epr 5460512 epr Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423126.1 3666505 D 326423 CDS YP_001423127.1 154687966 5460513 complement(3668307..3669149) 1 NC_009725.1 general stress protein A (GspA); GspA 3669149 gspA 5460513 gspA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GspA YP_001423127.1 3668307 R 326423 CDS YP_001423128.1 154687967 5460514 complement(3669427..3670059) 1 NC_009725.1 conserved hypothetical protein YwaC; hypothetical protein 3670059 ywaC 5460514 ywaC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423128.1 3669427 R 326423 CDS YP_001423129.1 154687968 5460006 complement(3670191..3671126) 1 NC_009725.1 catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate; 1,4-dihydroxy-2-naphthoate octaprenyltransferase 3671126 menA 5460006 menA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_001423129.1 3670191 R 326423 CDS YP_001423130.1 154687969 5460007 3671564..3671719 1 NC_009725.1 hypothetical protein 3671719 5460007 RBAM_035700 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423130.1 3671564 D 326423 CDS YP_001423131.1 154687970 5460008 3671735..3673246 1 NC_009725.1 transfers D-alanine to the D-alanyl carrier protein during the incorporation of D-alanine into lipoteichoic acid; D-alanine--poly(phosphoribitol) ligase subunit 1 3673246 dltA 5460008 dltA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 D-alanine--poly(phosphoribitol) ligase subunit 1 YP_001423131.1 3671735 D 326423 CDS YP_001423132.1 154687971 5460009 3673243..3674424 1 NC_009725.1 D-alanine export protein DltB; hypothetical protein 3674424 dltB 5460009 dltB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423132.1 3673243 D 326423 CDS YP_001423133.1 154687972 5460010 3674441..3674677 1 NC_009725.1 D-alanyl carrier protein subunit; involved in the incorporation of D-alanine into membrane-associated D-alanyl-lipoteichoic acid; D-alanyl carrier protein is the acceptor of activated D-alanine which it donates to a membrane acceptor(D-alanyl transferase) for incorporation into membrane lipoteichoic acid; D-alanine--poly(phosphoribitol) ligase subunit 2 3674677 dltC 5460010 dltC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 D-alanine--poly(phosphoribitol) ligase subunit 2 YP_001423133.1 3674441 D 326423 CDS YP_001423134.1 154687973 5460011 3674678..3675856 1 NC_009725.1 undecaprenol-phosphate-poly(glycerophosphate chain) D-alanine transfer protein DltD; DltD 3675856 dltD 5460011 dltD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DltD YP_001423134.1 3674678 D 326423 CDS YP_001423135.1 154687974 5460012 3676043..3677131 1 NC_009725.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 3677131 ywaA 5460012 ywaA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 branched-chain amino acid aminotransferase YP_001423135.1 3676043 D 326423 CDS YP_001423136.1 154687975 5461345 complement(3677172..3678500) 1 NC_009725.1 6-phospho-beta-glucosidase LicH; LicH 3678500 licH 5461345 licH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 LicH YP_001423136.1 3677172 R 326423 CDS YP_001423137.1 154687976 5461346 complement(3678497..3678829) 1 NC_009725.1 phosphotransferase system (PTS) lichenan specific enzyme IIA component LicA; LicA 3678829 licA 5461346 licA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 LicA YP_001423137.1 3678497 R 326423 CDS YP_001423138.1 154687977 5461347 complement(3678848..3680206) 1 NC_009725.1 phosphotransferase system (PTS) lichenan specific enzyme IIC component LicC; LicC 3680206 licC 5461347 licC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 LicC YP_001423138.1 3678848 R 326423 CDS YP_001423139.1 154687978 5461348 complement(3680222..3680530) 1 NC_009725.1 phosphotransferase system (PTS) lichenan specific enzyme IIB component LicB; LicB 3680530 licB 5461348 licB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 LicB YP_001423139.1 3680222 R 326423 CDS YP_001423140.1 154687979 5461349 complement(3680629..3682584) 1 NC_009725.1 licABCH operon regulator LicR; LicR 3682584 licR 5461349 licR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 LicR YP_001423140.1 3680629 R 326423 CDS YP_001423141.1 154687980 5461350 complement(3682917..3683507) 1 NC_009725.1 responsible for recognizing base lesions in the genome and initiating base excision DNA repair; 3-methyladenine DNA glycosylase 3683507 yxlJ 5461350 yxlJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 3-methyladenine DNA glycosylase YP_001423141.1 3682917 R 326423 CDS YP_001423142.1 154687981 5461351 3683720..3684748 1 NC_009725.1 ferrichrome transport system permease 3684748 5461351 RBAM_035820 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ferrichrome transport system permease YP_001423142.1 3683720 D 326423 CDS YP_001423143.1 154687982 5460212 3684749..3685762 1 NC_009725.1 ferrichrome ABC transporter (permease) 3685762 5460212 RBAM_035830 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ferrichrome ABC transporter (permease) YP_001423143.1 3684749 D 326423 CDS YP_001423144.1 154687983 5460213 3685779..3686675 1 NC_009725.1 iron ABC transporter substrate-binding protein 3686675 5460213 RBAM_035840 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 iron ABC transporter substrate-binding protein YP_001423144.1 3685779 D 326423 CDS YP_001423145.1 154687984 5460214 3686778..3687128 1 NC_009725.1 transcriptional regulator, arsR family; hypothetical protein 3687128 ydeT 5460214 ydeT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423145.1 3686778 D 326423 CDS YP_001423146.1 154687985 5460215 3687142..3688440 1 NC_009725.1 arsenical pump membrane protein; hypothetical protein 3688440 ydfA 5460215 ydfA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423146.1 3687142 D 326423 CDS YP_001423147.1 154687986 5460216 3688594..3688905 1 NC_009725.1 cellobiose phosphotransferase system enzyme; hypothetical protein 3688905 ydhM 5460216 ydhM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423147.1 3688594 D 326423 CDS YP_001423148.1 154687987 5460217 3688920..3689237 1 NC_009725.1 cellobiose phosphotransferase system enzyme; hypothetical protein 3689237 ydhN 5460217 ydhN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423148.1 3688920 D 326423 CDS YP_001423149.1 154687988 5460218 3689256..3690575 1 NC_009725.1 cellobiose phosphotransferase system enzyme YdhO; hypothetical protein 3690575 ydhO 5460218 ydhO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423149.1 3689256 D 326423 CDS YP_001423150.1 154687989 5462733 3690605..3692005 1 NC_009725.1 beta-glucosidase YdhP; hypothetical protein 3692005 ydhP 5462733 ydhP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423150.1 3690605 D 326423 CDS YP_001423151.1 154687990 5462734 3692025..3692906 1 NC_009725.1 fructokinase YdhR; hypothetical protein 3692906 ydhR 5462734 ydhR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423151.1 3692025 D 326423 CDS YP_001423152.1 154687991 5462735 3692903..3693847 1 NC_009725.1 mannose-6-phosphate isomerase YdhS; hypothetical protein 3693847 ydhS 5462735 ydhS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423152.1 3692903 D 326423 CDS YP_001423153.1 154687992 5462736 3693867..3694949 1 NC_009725.1 Mannan endo-1,4-beta-mannosidase YdhT; hypothetical protein 3694949 ydhT 5462736 ydhT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423153.1 3693867 D 326423 CDS YP_001423154.1 154687993 5462737 3695027..3696640 1 NC_009725.1 major catalase KatX; KatX 3696640 katX 5462737 katX Bacillus amyloliquefaciens subsp. plantarum str. FZB42 KatX YP_001423154.1 3695027 D 326423 CDS YP_001423155.1 154687994 5462738 complement(3696679..3697665) 1 NC_009725.1 penicillin amidase YxeI; hypothetical protein 3697665 yxeI 5462738 yxeI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423155.1 3696679 R 326423 CDS YP_001423156.1 154687995 5462739 3697982..3699340 1 NC_009725.1 purine-cytosine permease YxlA; hypothetical protein 3699340 yxlA 5462739 yxlA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423156.1 3697982 D 326423 CDS YP_001423157.1 154687996 5461370 complement(3699354..3700184) 1 NC_009725.1 conserved hypothetical protein YxkO; hypothetical protein 3700184 yxkO 5461370 yxkO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423157.1 3699354 R 326423 CDS YP_001423158.1 154687997 5461371 complement(3700276..3702006) 1 NC_009725.1 ABC membrane transporter (ATP-binding protein) CydD; CydD 3702006 cydD 5461371 cydD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 CydD YP_001423158.1 3700276 R 326423 CDS YP_001423159.1 154687998 5461372 complement(3702003..3703706) 1 NC_009725.1 ABC membrane transporter (ATP-binding protein) CydC; CydC 3703706 cydC 5461372 cydC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 CydC YP_001423159.1 3702003 R 326423 CDS YP_001423160.1 154687999 5461373 complement(3703706..3704722) 1 NC_009725.1 cytochrome d ubiquinol oxidase (subunit II) CydB; CydB 3704722 cydB 5461373 cydB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 CydB YP_001423160.1 3703706 R 326423 CDS YP_001423161.1 154688000 5461374 complement(3704706..3706112) 1 NC_009725.1 cytochrome d ubiquinol oxidase (subunit I) CydA; CydA 3706112 cydA 5461374 cydA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 CydA YP_001423161.1 3704706 R 326423 CDS YP_001423162.1 154688001 5461375 3706615..3707958 1 NC_009725.1 citrate/malate transporter CimH; CimH 3707958 cimH 5461375 cimH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 CimH YP_001423162.1 3706615 D 326423 CDS YP_001423163.1 154688002 5461376 complement(3707993..3708835) 1 NC_009725.1 conserved hypothetical protein YxkH; hypothetical protein 3708835 yxkH 5461376 yxkH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423163.1 3707993 R 326423 CDS YP_001423164.1 154688003 5462667 complement(3708935..3710035) 1 NC_009725.1 multiple sugar-binding transport ATP-binding protein MsmX; MsmX 3710035 msmX 5462667 msmX Bacillus amyloliquefaciens subsp. plantarum str. FZB42 MsmX YP_001423164.1 3708935 R 326423 CDS YP_001423165.1 154688004 5462668 complement(3710153..3711046) 1 NC_009725.1 hypothetical protein YxkF; hypothetical protein 3711046 yxkF 5462668 yxkF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423165.1 3710153 R 326423 CDS YP_001423166.1 154688005 5462669 complement(3711213..3712049) 1 NC_009725.1 conserved hypothetical protein YxkD; hypothetical protein 3712049 yxkD 5462669 yxkD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423166.1 3711213 R 326423 CDS YP_001423167.1 154688006 5462670 3712464..3713102 1 NC_009725.1 hypothetical protein YxkC; hypothetical protein 3713102 yxkC 5462670 yxkC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423167.1 3712464 D 326423 CDS YP_001423168.1 154688007 5462671 complement(3713149..3714165) 1 NC_009725.1 UDP-glucose 4-epimerase GalE; hypothetical protein 3714165 galE 5462671 galE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423168.1 3713149 R 326423 CDS YP_001423169.1 154688008 5462672 3714376..3715608 1 NC_009725.1 catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T 3715608 pepT 5462672 pepT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 peptidase T YP_001423169.1 3714376 D 326423 CDS YP_001423170.1 154688009 5462673 3716186..3716353 1 NC_009725.1 hypothetical protein YxjJ; hypothetical protein 3716353 yxjJ 5462673 yxjJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423170.1 3716186 D 326423 CDS YP_001423171.1 154688010 5459916 3716457..3716933 1 NC_009725.1 conserved hypothetical protein YxjI; hypothetical protein 3716933 yxjI 5459916 yxjI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423171.1 3716457 D 326423 CDS YP_001423172.1 154688011 5459917 3717183..3718319 1 NC_009725.1 conserved hypothetical protein YxjG; hypothetical protein 3718319 yxjG 5459917 yxjG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423172.1 3717183 D 326423 CDS YP_001423173.1 154688012 5459918 complement(3718354..3719235) 1 NC_009725.1 hypothetical protein YxjB; hypothetical protein 3719235 yxjB 5459918 yxjB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423173.1 3718354 R 326423 CDS YP_001423174.1 154688013 5459919 3719836..3721029 1 NC_009725.1 transport protein YxjA; hypothetical protein 3721029 yxjA 5459919 yxjA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423174.1 3719836 D 326423 CDS YP_001423175.1 154688014 5459920 complement(3721077..3721751) 1 NC_009725.1 hypothetical protein 3721751 5459920 RBAM_036150 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423175.1 3721077 R 326423 CDS YP_001423176.1 154688015 5459921 complement(3721892..3722200) 1 NC_009725.1 hypothetical protein YxiS; hypothetical protein 3722200 yxiS 5459921 yxiS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423176.1 3721892 R 326423 CDS YP_001423177.1 154688016 5459922 complement(3722461..3724512) 1 NC_009725.1 catalase KatE; KatE 3724512 katE 5459922 katE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 KatE YP_001423177.1 3722461 R 326423 CDS YP_001423178.1 154688017 5459815 3724713..3725993 1 NC_009725.1 citrate transporter CitH; CitH 3725993 citH 5459815 citH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 CitH YP_001423178.1 3724713 D 326423 CDS YP_001423179.1 154688018 5459816 complement(3726035..3726766) 1 NC_009725.1 pfam00722; glyco_hydro_16; endo-beta-1,3-1,4 glucanase; BglS 3726766 bglS 5459816 bglS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 BglS YP_001423179.1 3726035 R 326423 CDS YP_001423180.1 154688019 5459817 complement(3727002..3727829) 1 NC_009725.1 transcriptional antiterminator (BglG family) LicT; LicT 3727829 licT 5459817 licT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 LicT YP_001423180.1 3727002 R 326423 CDS YP_001423181.1 154688020 5459818 3727968..3729251 1 NC_009725.1 conserved hypothetical protein YxiO; hypothetical protein 3729251 yxiO 5459818 yxiO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423181.1 3727968 D 326423 CDS YP_001423182.1 154688021 5459819 complement(3729283..3730722) 1 NC_009725.1 ATP-dependent RNA helicase DbpA; DbpA 3730722 dbpA 5459819 dbpA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DbpA YP_001423182.1 3729283 R 326423 CDS YP_001423183.1 154688022 5459820 complement(3730777..3731151) 1 NC_009725.1 hypothetical protein 3731151 5459820 RBAM_036230 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423183.1 3730777 R 326423 CDS YP_001423184.1 154688023 5459821 complement(3731132..3731467) 1 NC_009725.1 hypothetical protein 3731467 5459821 RBAM_036240 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423184.1 3731132 R 326423 CDS YP_001423185.1 154688024 5460457 complement(3731454..3731819) 1 NC_009725.1 hypothetical protein 3731819 5460457 RBAM_036250 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423185.1 3731454 R 326423 CDS YP_001423186.1 154688025 5460458 complement(3731869..3732330) 1 NC_009725.1 hypothetical protein YxiI; hypothetical protein 3732330 yxiI 5460458 yxiI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423186.1 3731869 R 326423 CDS YP_001423187.1 154688026 5460459 complement(3732375..3732854) 1 NC_009725.1 hypothetical protein YxiK; hypothetical protein 3732854 yxiK 5460459 yxiK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423187.1 3732375 R 326423 CDS YP_001423188.1 154688027 5460460 complement(3732922..3733329) 1 NC_009725.1 hypothetical protein YxiG; hypothetical protein 3733329 yxiG 5460460 yxiG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423188.1 3732922 R 326423 CDS YP_001423189.1 154688028 5460461 complement(3733333..3733743) 1 NC_009725.1 hypothetical protein YxxG; hypothetical protein 3733743 yxxG 5460461 yxxG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423189.1 3733333 R 326423 CDS YP_001423190.1 154688029 5460462 complement(3733944..3734390) 1 NC_009725.1 hypothetical protein 3734390 5460462 RBAM_036300 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423190.1 3733944 R 326423 CDS YP_001423191.1 154688030 5460463 complement(3734405..3734623) 1 NC_009725.1 hypothetical protein 3734623 5460463 RBAM_036310 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423191.1 3734405 R 326423 CDS YP_001423192.1 154688031 5460107 complement(3735173..3736237) 1 NC_009725.1 pectate lyase PelB; PelB 3736237 pelB 5460107 pelB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 PelB YP_001423192.1 3735173 R 326423 CDS YP_001423193.1 154688032 5460108 complement(3736380..3737291) 1 NC_009725.1 conserved hypothetical protein YxxF; hypothetical protein 3737291 yxxF 5460108 yxxF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423193.1 3736380 R 326423 CDS YP_001423194.1 154688033 5460109 complement(3737439..3737885) 1 NC_009725.1 conserved hypothetical protein YxiE; hypothetical protein 3737885 yxiE 5460109 yxiE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423194.1 3737439 R 326423 CDS YP_001423195.1 154688034 5460110 complement(3737967..3739364) 1 NC_009725.1 beta-glucosidase BglH; BglH 3739364 bglH 5460110 bglH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 BglH YP_001423195.1 3737967 R 326423 CDS YP_001423196.1 154688035 5460111 complement(3739383..3741218) 1 NC_009725.1 phosphotransferase system (PTS) beta-glucoside-specific enzyme IIBCA component BglP; BglP 3741218 bglP 5460111 bglP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 BglP YP_001423196.1 3739383 R 326423 CDS YP_001423197.1 154688036 5460112 3741886..3745017 1 NC_009725.1 hypothetical protein 3745017 5460112 RBAM_036370 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423197.1 3741886 D 326423 CDS YP_001423198.1 154688037 5460113 complement(3745006..3745395) 1 NC_009725.1 hypothetical protein 3745395 5460113 RBAM_036380 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423198.1 3745006 R 326423 CDS YP_001423199.1 154688038 5460292 complement(3745575..3746981) 1 NC_009725.1 conserved hypothetical protein YxiA; hypothetical protein 3746981 yxiA 5460292 yxiA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423199.1 3745575 R 326423 CDS YP_001423200.1 154688039 5460293 3747223..3747669 1 NC_009725.1 regulates expression of hut operon by antitermination mechanism; forms a homohexamer; binds both magnesium and L-histidine and then binds RNA sequences within the terminator region and destabilizes the terminator structure; anti-terminator HutP 3747669 hutP 5460293 hutP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 anti-terminator HutP YP_001423200.1 3747223 D 326423 CDS YP_001423201.1 154688040 5460294 3747779..3749320 1 NC_009725.1 catalyzes the degradation of histidine to urocanate and ammmonia; histidine ammonia-lyase 3749320 hutH 5460294 hutH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 histidine ammonia-lyase YP_001423201.1 3747779 D 326423 CDS YP_001423202.1 154688041 5460295 3749317..3750981 1 NC_009725.1 catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism; urocanate hydratase 3750981 hutU 5460295 hutU Bacillus amyloliquefaciens subsp. plantarum str. FZB42 urocanate hydratase YP_001423202.1 3749317 D 326423 CDS YP_001423203.1 154688042 5460296 3750983..3752248 1 NC_009725.1 catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway; imidazolonepropionase 3752248 hutI 5460296 hutI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 imidazolonepropionase YP_001423203.1 3750983 D 326423 CDS YP_001423204.1 154688043 5460297 3752241..3753191 1 NC_009725.1 catalyzes the formation of glutamate and formamide from N-formimidoyl-L-glutamate; formimidoylglutamase 3753191 hutG 5460297 hutG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 formimidoylglutamase YP_001423204.1 3752241 D 326423 CDS YP_001423205.1 154688044 5460298 3753262..3754680 1 NC_009725.1 histidine permease HutM; HutM 3754680 hutM 5460298 hutM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 HutM YP_001423205.1 3753262 D 326423 CDS YP_001423206.1 154688045 5459958 complement(3754720..3756021) 1 NC_009725.1 Catalyzes the reversible phosphorolysis of pyrimidines in the nucleotide synthesis salvage pathway; pyrimidine-nucleoside phosphorylase 3756021 pdp 5459958 pdp Bacillus amyloliquefaciens subsp. plantarum str. FZB42 pyrimidine-nucleoside phosphorylase YP_001423206.1 3754720 R 326423 CDS YP_001423207.1 154688046 5459959 complement(3756049..3757230) 1 NC_009725.1 pyrimidine-nucleoside transport protein NupC; NupC 3757230 nupC 5459959 nupC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 NupC YP_001423207.1 3756049 R 326423 CDS YP_001423208.1 154688047 5459960 complement(3757323..3757991) 1 NC_009725.1 deoxyribose-phosphate aldolase DeoC; hypothetical protein 3757991 deoC 5459960 deoC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423208.1 3757323 R 326423 CDS YP_001423209.1 154688048 5459961 complement(3758082..3759023) 1 NC_009725.1 deoxyribonucleoside negative regulator DeoR; hypothetical protein 3759023 deoR 5459961 deoR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423209.1 3758082 R 326423 CDS YP_001423210.1 154688049 5459962 complement(3759094..3759906) 1 NC_009725.1 conserved hypothetical protein YxeH; hypothetical protein 3759906 yxeH 5459962 yxeH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423210.1 3759094 R 326423 CDS YP_001423211.1 154688050 5459963 complement(3759975..3760499) 1 NC_009725.1 hypothetical protein YxeG; hypothetical protein 3760499 yxeG 5459963 yxeG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423211.1 3759975 R 326423 CDS YP_001423212.1 154688051 5459964 complement(3760489..3760905) 1 NC_009725.1 hypothetical protein YxeF; hypothetical protein 3760905 yxeF 5459964 yxeF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423212.1 3760489 R 326423 CDS YP_001423213.1 154688052 5462170 3761019..3761405 1 NC_009725.1 hypothetical protein YxeE; hypothetical protein 3761405 yxeE 5462170 yxeE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423213.1 3761019 D 326423 CDS YP_001423214.1 154688053 5462171 3761563..3761928 1 NC_009725.1 hypothetical protein YxeD; hypothetical protein 3761928 yxeD 5462171 yxeD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423214.1 3761563 D 326423 CDS YP_001423215.1 154688054 5462172 complement(3761979..3762239) 1 NC_009725.1 conserved hypothetical protein YxeC; hypothetical protein 3762239 yxeC 5462172 yxeC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423215.1 3761979 R 326423 CDS YP_001423216.1 154688055 5462173 3762500..3763462 1 NC_009725.1 ABC transporter (binding protein) YxeB; hypothetical protein 3763462 yxeB 5462173 yxeB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423216.1 3762500 D 326423 CDS YP_001423217.1 154688056 5462174 3763584..3763916 1 NC_009725.1 transposase 3763916 5462174 RBAM_036570 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 transposase YP_001423217.1 3763584 D 326423 CDS YP_001423218.1 154688057 5462175 3763922..3764734 1 NC_009725.1 transposases lmo0828-like protein 3764734 5462175 RBAM_036580 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 transposases lmo0828-like protein YP_001423218.1 3763922 D 326423 CDS YP_001423219.1 154688058 5462176 complement(3764800..3765147) 1 NC_009725.1 hypothetical protein YxeA; hypothetical protein 3765147 yxeA 5462176 yxeA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423219.1 3764800 R 326423 CDS YP_001423220.1 154688059 5460590 complement(3765161..3767029) 1 NC_009725.1 hypothetical protein YxdM; hypothetical protein 3767029 yxdM 5460590 yxdM Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423220.1 3765161 R 326423 CDS YP_001423221.1 154688060 5460591 complement(3767004..3767777) 1 NC_009725.1 ABC transporter (ATP-binding protein) YxdL; hypothetical protein 3767777 yxdL 5460591 yxdL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423221.1 3767004 R 326423 CDS YP_001423222.1 154688061 5460592 complement(3767921..3768871) 1 NC_009725.1 two-component sensor histidine kinase YxdK; hypothetical protein 3768871 yxdK 5460592 yxdK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423222.1 3767921 R 326423 CDS YP_001423223.1 154688062 5460593 complement(3768895..3769584) 1 NC_009725.1 two-component response regulator YxdJ; hypothetical protein 3769584 yxdJ 5460593 yxdJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423223.1 3768895 R 326423 CDS YP_001423224.1 154688063 5460594 complement(3769734..3771173) 1 NC_009725.1 sensor histidine kinase MrsK2; MrsK2 3771173 mrsK2 5460594 mrsK2 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 MrsK2 YP_001423224.1 3769734 R 326423 CDS YP_001423225.1 154688064 5460595 complement(3771170..3771892) 1 NC_009725.1 response-regulator MrsR2; MrsR2 3771892 mrsR2 5460595 mrsR2 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 MrsR2 YP_001423225.1 3771170 R 326423 CDS YP_001423226.1 154688065 5460596 3772135..3773046 1 NC_009725.1 ABC transporter, ATP-binding protein MrsF; MrsF 3773046 mrsF 5460596 mrsF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 MrsF YP_001423226.1 3772135 D 326423 CDS YP_001423227.1 154688066 5462660 3773043..3773801 1 NC_009725.1 ABC-transporter integral membrane protein MrsG; MrsG 3773801 mrsG 5462660 mrsG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 MrsG YP_001423227.1 3773043 D 326423 CDS YP_001423228.1 154688067 5462661 3773818..3774552 1 NC_009725.1 ABC-transporter integral membrane protein MrsE; MrsE 3774552 mrsE 5462661 mrsE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 MrsE YP_001423228.1 3773818 D 326423 CDS YP_001423229.1 154688068 5462662 complement(3774830..3775702) 1 NC_009725.1 fructose-1,6-bisphosphate aldolase FbaB; hypothetical protein 3775702 fbaB 5462662 fbaB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423229.1 3774830 R 326423 CDS YP_001423230.1 154688069 5462663 complement(3775705..3776547) 1 NC_009725.1 inositol utilization protein I (IolI); hypothetical protein 3776547 iolI 5462663 iolI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423230.1 3775705 R 326423 CDS YP_001423231.1 154688070 5462664 complement(3776635..3777504) 1 NC_009725.1 inositol utilization protein H (IolH); hypothetical protein 3777504 iolH 5462664 iolH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423231.1 3776635 R 326423 CDS YP_001423232.1 154688071 5462665 complement(3777524..3778558) 1 NC_009725.1 myo-inositol 2-dehydrogenase IolG; hypothetical protein 3778558 iolG 5462665 iolG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423232.1 3777524 R 326423 CDS YP_001423233.1 154688072 5462666 complement(3778581..3779876) 1 NC_009725.1 inositol transport protein IolF; hypothetical protein 3779876 iolF 5462666 iolF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423233.1 3778581 R 326423 CDS YP_001423234.1 154688073 5462142 complement(3779889..3780785) 1 NC_009725.1 inositol utilization protein E (IolE); hypothetical protein 3780785 iolE 5462142 iolE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423234.1 3779889 R 326423 CDS YP_001423235.1 154688074 5462143 complement(3780801..3782714) 1 NC_009725.1 inositol utilization protein D (IolD); hypothetical protein 3782714 iolD 5462143 iolD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423235.1 3780801 R 326423 CDS YP_001423236.1 154688075 5462144 complement(3782739..3783731) 1 NC_009725.1 inositol utilization protein C (IolC); hypothetical protein 3783731 iolC 5462144 iolC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423236.1 3782739 R 326423 CDS YP_001423237.1 154688076 5462145 complement(3783755..3784570) 1 NC_009725.1 inositol utilization protein B (IolB); hypothetical protein 3784570 iolB 5462145 iolB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423237.1 3783755 R 326423 CDS YP_001423238.1 154688077 5462146 complement(3784644..3786107) 1 NC_009725.1 methylmalonate-semialdehyde dehydrogenase IolA; hypothetical protein 3786107 iolA 5462146 iolA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423238.1 3784644 R 326423 CDS YP_001423239.1 154688078 5462147 3786552..3787307 1 NC_009725.1 iol operon repressor (DNA-binding protein) IolR; hypothetical protein 3787307 iolR 5462147 iolR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423239.1 3786552 D 326423 CDS YP_001423240.1 154688079 5462148 3787385..3788317 1 NC_009725.1 inositol utilization protein S (IolS); hypothetical protein 3788317 iolS 5462148 iolS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423240.1 3787385 D 326423 CDS YP_001423241.1 154688080 5459862 3788436..3789824 1 NC_009725.1 sugar transporter CsbC; hypothetical protein 3789824 csbC 5459862 csbC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423241.1 3788436 D 326423 CDS YP_001423242.1 154688081 5459863 complement(3789867..3791747) 1 NC_009725.1 molecular chaperone; heat shock protein 90 3791747 htpG 5459863 htpG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 heat shock protein 90 YP_001423242.1 3789867 R 326423 CDS YP_001423243.1 154688082 5459864 complement(3791919..3792167) 1 NC_009725.1 hypothetical protein YxcA; hypothetical protein 3792167 yxcA 5459864 yxcA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423243.1 3791919 R 326423 CDS YP_001423244.1 154688083 5459865 3792296..3793117 1 NC_009725.1 hypothetical oxidoreductase YxbG; short chain dehydrogenase 3793117 yxbG 5459865 yxbG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 short chain dehydrogenase YP_001423244.1 3792296 D 326423 CDS YP_001423245.1 154688084 5459866 complement(3793174..3793773) 1 NC_009725.1 response regulators YocG; hypothetical protein 3793773 yocG 5459866 yocG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423245.1 3793174 R 326423 CDS YP_001423246.1 154688085 5459867 complement(3793770..3794906) 1 NC_009725.1 two-component sensor histidine kinase YocF; hypothetical protein 3794906 yocF 5459867 yocF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423246.1 3793770 R 326423 CDS YP_001423247.1 154688086 5459868 complement(3795025..3796074) 1 NC_009725.1 fatty acid desaturase Des; fatty acid desaturase 3796074 des 5459868 des Bacillus amyloliquefaciens subsp. plantarum str. FZB42 fatty acid desaturase YP_001423247.1 3795025 R 326423 CDS YP_001423248.1 154688087 5462071 complement(3796319..3797476) 1 NC_009725.1 conserved hypothetical protein YxbF; hypothetical protein 3797476 yxbF 5462071 yxbF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423248.1 3796319 R 326423 CDS YP_001423249.1 154688088 5462072 3797618..3798955 1 NC_009725.1 aldehyde dehydrogenase AldX; AldX 3798955 aldX 5462072 aldX Bacillus amyloliquefaciens subsp. plantarum str. FZB42 AldX YP_001423249.1 3797618 D 326423 CDS YP_001423250.1 154688089 5462073 complement(3798993..3800240) 1 NC_009725.1 conserved hypothetical protein YxaL; hypothetical protein 3800240 yxaL 5462073 yxaL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423250.1 3798993 R 326423 CDS YP_001423251.1 154688090 5462074 complement(3800344..3800763) 1 NC_009725.1 hypothetical protein YxaJ; hypothetical protein 3800763 yxaJ 5462074 yxaJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423251.1 3800344 R 326423 CDS YP_001423252.1 154688091 5462075 3800906..3801217 1 NC_009725.1 hypothetical protein 3801217 5462075 RBAM_036920 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423252.1 3800906 D 326423 CDS YP_001423253.1 154688092 5462076 3801296..3802462 1 NC_009725.1 hypothetical protein 3802462 5462076 RBAM_036930 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423253.1 3801296 D 326423 CDS YP_001423254.1 154688093 5462077 3802532..3802987 1 NC_009725.1 conserved hypothetical protein YxaI; hypothetical protein 3802987 yxaI 5462077 yxaI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423254.1 3802532 D 326423 CDS YP_001423255.1 154688094 5460920 complement(3803024..3803710) 1 NC_009725.1 hypothetical protein 3803710 5460920 RBAM_036950 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423255.1 3803024 R 326423 CDS YP_001423256.1 154688095 5460921 3804009..3804572 1 NC_009725.1 alkyl hydroperoxide reductase subunit C (small subunit) AhpC; hypothetical protein 3804572 ahpC 5460921 ahpC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423256.1 3804009 D 326423 CDS YP_001423257.1 154688096 5460922 3804586..3806115 1 NC_009725.1 alkyl hydroperoxide reductase (large subunit) and NADH dehydrogenase AhpF; AhpF 3806115 ahpF 5460922 ahpF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 AhpF YP_001423257.1 3804586 D 326423 CDS YP_001423258.1 154688097 5460923 complement(3806160..3807392) 1 NC_009725.1 hypothetical protein 3807392 5460923 RBAM_036980 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423258.1 3806160 R 326423 CDS YP_001423259.1 154688098 5460924 complement(3807532..3808878) 1 NC_009725.1 amino acid permease YdgF; hypothetical protein 3808878 ydgF 5460924 ydgF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423259.1 3807532 R 326423 CDS YP_001423260.1 154688099 5460925 3809403..3811328 1 NC_009725.1 fructose-1,6-bisphosphatase Fbp; Fbp 3811328 fbp 5460925 fbp Bacillus amyloliquefaciens subsp. plantarum str. FZB42 Fbp YP_001423260.1 3809403 D 326423 CDS YP_001423261.1 154688100 5460926 complement(3811368..3811826) 1 NC_009725.1 carbon monoxide dehydrogenase small subunit 3811826 5460926 RBAM_037010 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 carbon monoxide dehydrogenase small subunit YP_001423261.1 3811368 R 326423 CDS YP_001423262.1 154688101 5462642 complement(3811819..3812661) 1 NC_009725.1 xanthine dehydrogenase FAD-binding subunit 3812661 5462642 RBAM_037020 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 xanthine dehydrogenase FAD-binding subunit YP_001423262.1 3811819 R 326423 CDS YP_001423263.1 154688102 5462643 complement(3812648..3814978) 1 NC_009725.1 carbon monoxide dehydrogenase large subunit 3814978 5462643 RBAM_037030 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 carbon monoxide dehydrogenase large subunit YP_001423263.1 3812648 R 326423 CDS YP_001423264.1 154688103 5462644 complement(3814984..3815508) 1 NC_009725.1 xanthine dehydrogenase 3815508 5462644 RBAM_037040 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 xanthine dehydrogenase YP_001423264.1 3814984 R 326423 CDS YP_001423265.1 154688104 5462645 complement(3815601..3816617) 1 NC_009725.1 xanthine dehydrogenase 3816617 5462645 RBAM_037050 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 xanthine dehydrogenase YP_001423265.1 3815601 R 326423 CDS YP_001423266.1 154688105 5462646 complement(3816686..3817702) 1 NC_009725.1 hypothetical protein 3817702 5462646 RBAM_037060 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423266.1 3816686 R 326423 CDS YP_001423267.1 154688106 5462647 complement(3817960..3818205) 1 NC_009725.1 hypothetical protein 3818205 5462647 RBAM_037070 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423267.1 3817960 R 326423 CDS YP_001423268.1 154688107 5462648 complement(3818387..3818572) 1 NC_009725.1 hypothetical protein 3818572 5462648 RBAM_037080 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423268.1 3818387 R 326423 CDS YP_001423269.1 154688108 5459594 complement(3818622..3818864) 1 NC_009725.1 hypothetical protein 3818864 5459594 RBAM_037090 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423269.1 3818622 R 326423 CDS YP_001423270.1 154688109 5459595 complement(3818959..3819198) 1 NC_009725.1 hypothetical protein 3819198 5459595 RBAM_037100 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423270.1 3818959 R 326423 CDS YP_001423271.1 154688110 5459596 complement(3819281..3819514) 1 NC_009725.1 hypothetical protein 3819514 5459596 RBAM_037110 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423271.1 3819281 R 326423 CDS YP_001423272.1 154688111 5459597 complement(3819757..3821556) 1 NC_009725.1 hypothetical protein 3821556 5459597 RBAM_037120 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423272.1 3819757 R 326423 CDS YP_001423273.1 154688112 5459598 complement(3822228..3823478) 1 NC_009725.1 hypothetical protein 3823478 5459598 RBAM_037130 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423273.1 3822228 R 326423 CDS YP_001423274.1 154688113 5459599 complement(3823947..3824945) 1 NC_009725.1 hypothetical protein 3824945 5459599 RBAM_037140 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423274.1 3823947 R 326423 CDS YP_001423275.1 154688114 5459600 complement(3825100..3825579) 1 NC_009725.1 SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 3825579 yydA 5459600 yydA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 rRNA large subunit methyltransferase YP_001423275.1 3825100 R 326423 CDS YP_001423276.1 154688115 5461122 complement(3825925..3826170) 1 NC_009725.1 hypothetical protein 3826170 5461122 RBAM_037160 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423276.1 3825925 R 326423 CDS YP_001423277.1 154688116 5461123 complement(3826211..3826423) 1 NC_009725.1 hypothetical protein 3826423 5461123 RBAM_037170 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423277.1 3826211 R 326423 CDS YP_001423278.1 154688117 5461124 complement(3826474..3827637) 1 NC_009725.1 hypothetical protein YycP; hypothetical protein 3827637 yycP 5461124 yycP Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423278.1 3826474 R 326423 CDS YP_001423279.1 154688118 5461125 complement(3827648..3828397) 1 NC_009725.1 conserved hypothetical protein; expressed in presence of soil extract; hypothetical protein 3828397 yycO 5461125 yycO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423279.1 3827648 R 326423 CDS YP_001423280.1 154688119 5461126 3828580..3829560 1 NC_009725.1 hypothetical protein 3829560 5461126 RBAM_037200 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423280.1 3828580 D 326423 CDS YP_001423281.1 154688120 5461127 complement(3829590..3830063) 1 NC_009725.1 conserved hypothetical protein YycN; hypothetical protein 3830063 yycN 5461127 yycN Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423281.1 3829590 R 326423 CDS YP_001423282.1 154688121 5461128 complement(3830232..3831347) 1 NC_009725.1 hypothetical protein 3831347 5461128 RBAM_037220 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423282.1 3830232 R 326423 CDS YP_001423283.1 154688122 5460705 complement(3831478..3832368) 1 NC_009725.1 arginase RocF; RocF 3832368 rocF 5460705 rocF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 RocF YP_001423283.1 3831478 R 326423 CDS YP_001423284.1 154688123 5460706 complement(3832442..3833842) 1 NC_009725.1 amino acid permease RocE; RocE 3833842 rocE 5460706 rocE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 RocE YP_001423284.1 3832442 R 326423 CDS YP_001423285.1 154688124 5460707 complement(3834066..3835271) 1 NC_009725.1 ornithine aminotransferase RocD; ornithine--oxo-acid transaminase 3835271 rocD 5460707 rocD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ornithine--oxo-acid transaminase YP_001423285.1 3834066 R 326423 CDS YP_001423286.1 154688125 5460708 3835491..3836894 1 NC_009725.1 arginine utilization regulatory protein RocR; hypothetical protein 3836894 rocR 5460708 rocR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423286.1 3835491 D 326423 CDS YP_001423287.1 154688126 5460709 complement(3836936..3837655) 1 NC_009725.1 hypothetical protein 3837655 5460709 RBAM_037270 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423287.1 3836936 R 326423 CDS YP_001423288.1 154688127 5460710 complement(3837669..3839294) 1 NC_009725.1 ABC transporter ATP-binding protein 3839294 5460710 RBAM_037280 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ABC transporter ATP-binding protein YP_001423288.1 3837669 R 326423 CDS YP_001423289.1 154688128 5460711 complement(3839322..3840512) 1 NC_009725.1 hypothetical protein 3840512 5460711 RBAM_037290 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423289.1 3839322 R 326423 CDS YP_001423290.1 154688129 5461414 complement(3840531..3841853) 1 NC_009725.1 hypothetical protein 3841853 5461414 RBAM_037300 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423290.1 3840531 R 326423 CDS YP_001423291.1 154688130 5461415 complement(3841850..3842962) 1 NC_009725.1 hypothetical protein 3842962 5461415 RBAM_037310 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423291.1 3841850 R 326423 CDS YP_001423292.1 154688131 5461416 complement(3843089..3844507) 1 NC_009725.1 signal transduction histidine kinase 3844507 5461416 RBAM_037320 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 signal transduction histidine kinase YP_001423292.1 3843089 R 326423 CDS YP_001423293.1 154688132 5461417 complement(3844504..3844713) 1 NC_009725.1 hypothetical protein 3844713 5461417 RBAM_037330 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423293.1 3844504 R 326423 CDS YP_001423294.1 154688133 5461418 complement(3845059..3845142) 1 NC_009725.1 hypothetical protein 3845142 5461418 RBAM_037340 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423294.1 3845059 R 326423 CDS YP_001423295.1 154688134 5461419 complement(3845225..3846421) 1 NC_009725.1 serine proteinase YyxA; hypothetical protein 3846421 yyxA 5461419 yyxA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423295.1 3845225 R 326423 CDS YP_001423296.1 154688135 5461420 complement(3846508..3847302) 1 NC_009725.1 conserved hypothetical protein YycJ; hypothetical protein 3847302 yycJ 5461420 yycJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423296.1 3846508 R 326423 CDS YP_001423297.1 154688136 5462188 complement(3847317..3848156) 1 NC_009725.1 conserved hypothetical protein YycI; hypothetical protein 3848156 yycI 5462188 yycI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423297.1 3847317 R 326423 CDS YP_001423298.1 154688137 5462189 complement(3848143..3849501) 1 NC_009725.1 conserved hypothetical protein YycH; hypothetical protein 3849501 yycH 5462189 yycH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423298.1 3848143 R 326423 CDS YP_001423299.1 154688138 5462190 complement(3849491..3851326) 1 NC_009725.1 two-component sensor histidine kinase YycG; hypothetical protein 3851326 yycG 5462190 yycG Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423299.1 3849491 R 326423 CDS YP_001423300.1 154688139 5462191 complement(3851333..3852043) 1 NC_009725.1 two-component response regulator YycF; hypothetical protein 3852043 yycF 5462191 yycF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423300.1 3851333 R 326423 CDS YP_001423301.1 154688140 5460682 complement(3853006..3854298) 1 NC_009725.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 3854298 purA 5460682 purA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 adenylosuccinate synthetase YP_001423301.1 3853006 R 326423 CDS YP_001423302.1 154688141 5460683 complement(3854537..3854953) 1 NC_009725.1 conserved hypothetical protein YycE; hypothetical protein 3854953 yycE 5460683 yycE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423302.1 3854537 R 326423 CDS YP_001423303.1 154688142 5460026 complement(3855067..3856440) 1 NC_009725.1 unwinds double stranded DNA; replicative DNA helicase 3856440 dnaC 5460026 dnaC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 replicative DNA helicase YP_001423303.1 3855067 R 326423 CDS YP_001423304.1 154688143 5460027 3856602..3856799 1 NC_009725.1 hypothetical protein YycD; hypothetical protein 3856799 yycD 5460027 yycD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423304.1 3856602 D 326423 CDS YP_001423305.1 154688144 5460028 complement(3856830..3857039) 1 NC_009725.1 hypothetical protein YyzB; hypothetical protein 3857039 yyzB 5460028 yyzB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423305.1 3856830 R 326423 CDS YP_001423306.1 154688145 5460029 3857158..3857301 1 NC_009725.1 hypothetical protein YycC; hypothetical protein 3857301 yycC 5460029 yycC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423306.1 3857158 D 326423 CDS YP_001423307.1 154688146 5460030 3857375..3857638 1 NC_009725.1 hypothetical protein YycA; hypothetical protein 3857638 yycA 5460030 yycA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423307.1 3857375 D 326423 CDS YP_001423308.1 154688147 5460031 complement(3857718..3859010) 1 NC_009725.1 hypothetical protein 3859010 5460031 RBAM_037520 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423308.1 3857718 R 326423 CDS YP_001423309.1 154688148 5460032 complement(3859033..3860088) 1 NC_009725.1 hypothetical protein 3860088 5460032 RBAM_037530 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423309.1 3859033 R 326423 CDS YP_001423310.1 154688149 5460625 complement(3860081..3861268) 1 NC_009725.1 hypothetical protein 3861268 5460625 RBAM_037540 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423310.1 3860081 R 326423 CDS YP_001423311.1 154688150 5460626 complement(3861258..3862592) 1 NC_009725.1 hypothetical protein 3862592 5460626 RBAM_037550 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423311.1 3861258 R 326423 CDS YP_001423312.1 154688151 5460627 complement(3862589..3863284) 1 NC_009725.1 hypothetical protein 3863284 5460627 RBAM_037560 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423312.1 3862589 R 326423 CDS YP_001423313.1 154688152 5460628 complement(3863333..3863998) 1 NC_009725.1 hypothetical protein 3863998 5460628 RBAM_037570 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423313.1 3863333 R 326423 CDS YP_001423314.1 154688153 5460629 complement(3864040..3864489) 1 NC_009725.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 3864489 rplI 5460629 rplI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 50S ribosomal protein L9 YP_001423314.1 3864040 R 326423 CDS YP_001423315.1 154688154 5460630 complement(3864486..3866465) 1 NC_009725.1 conserved hypothetical protein YybT; hypothetical protein 3866465 yybT 5460630 yybT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423315.1 3864486 R 326423 CDS YP_001423316.1 154688155 5460631 complement(3866496..3867431) 1 NC_009725.1 conserved hypothetical protein YybS; hypothetical protein 3867431 yybS 5460631 yybS Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423316.1 3866496 R 326423 CDS YP_001423317.1 154688156 5463027 3867961..3868446 1 NC_009725.1 spore coat protein F (CotF); spore coat protein F 3868446 cotF 5463027 cotF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 spore coat protein F YP_001423317.1 3867961 D 326423 CDS YP_001423318.1 154688157 5463028 complement(3868483..3868854) 1 NC_009725.1 conserved hypothetical protein YybR; hypothetical protein 3868854 yybR 5463028 yybR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423318.1 3868483 R 326423 CDS YP_001423319.1 154688158 5463029 3869061..3869990 1 NC_009725.1 catalyzes the hydrolysis of pyrophosphate to phosphate; manganese-dependent inorganic pyrophosphatase 3869990 ppaC 5463029 ppaC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 manganese-dependent inorganic pyrophosphatase YP_001423319.1 3869061 D 326423 CDS YP_001423320.1 154688159 5463030 3870176..3871093 1 NC_009725.1 hypothetical protein 3871093 5463030 RBAM_037640 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423320.1 3870176 D 326423 CDS YP_001423321.1 154688160 5463031 3871441..3872862 1 NC_009725.1 levansucrase; pfam02435; glycosyl hydrolase family 68; levan is implicated in the aggregation of wheatroot-adhering soil; SacB 3872862 sacB 5463031 sacB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 SacB YP_001423321.1 3871441 D 326423 CDS YP_001423322.1 154688161 5463032 3872936..3874480 1 NC_009725.1 conserved hypothetical protein YveB; hypothetical protein 3874480 yveB 5463032 yveB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423322.1 3872936 D 326423 CDS YP_001423323.1 154688162 5463033 3874560..3875222 1 NC_009725.1 transcriptional regulator 3875222 5463033 RBAM_037670 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 transcriptional regulator YP_001423323.1 3874560 D 326423 CDS YP_001423324.1 154688163 5460632 complement(3875300..3875809) 1 NC_009725.1 nuclease inhibitor DinB; DinB 3875809 dinB 5460632 dinB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 DinB YP_001423324.1 3875300 R 326423 CDS YP_001423325.1 154688164 5460633 complement(3875860..3876774) 1 NC_009725.1 hypothetical protein YfmI1; hypothetical protein 3876774 yfmI1 5460633 yfmI1 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423325.1 3875860 R 326423 CDS YP_001423326.1 154688165 5460634 complement(3876802..3877071) 1 NC_009725.1 hypothetical protein YfmI2; hypothetical protein 3877071 yfm2 5460634 yfm2 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423326.1 3876802 R 326423 CDS YP_001423327.1 154688166 5460635 complement(3877260..3878138) 1 NC_009725.1 hypothetical protein 3878138 5460635 RBAM_037710 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423327.1 3877260 R 326423 CDS YP_001423328.1 154688167 5460636 3878265..3878843 1 NC_009725.1 hypothetical protein 3878843 5460636 RBAM_037720 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423328.1 3878265 D 326423 CDS YP_001423329.1 154688168 5460637 complement(3878862..3880064) 1 NC_009725.1 conserved hypothetical protein YybF; hypothetical protein 3880064 yybF 5460637 yybF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423329.1 3878862 R 326423 CDS YP_001423330.1 154688169 5460638 complement(3880065..3880955) 1 NC_009725.1 HTH-type transcriptional regulator YybE; hypothetical protein 3880955 yybE 5460638 yybE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423330.1 3880065 R 326423 CDS YP_001423331.1 154688170 5460878 complement(3881112..3881480) 1 NC_009725.1 hypothetical protein 3881480 5460878 RBAM_037750 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423331.1 3881112 R 326423 CDS YP_001423332.1 154688171 5460879 complement(3881511..3882149) 1 NC_009725.1 NADH dehydrogenase YdgI; hypothetical protein 3882149 ydgI 5460879 ydgI Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423332.1 3881511 R 326423 CDS YP_001423333.1 154688172 5460880 complement(3882163..3882597) 1 NC_009725.1 HTH-type transcriptional regulator YdgJ; hypothetical protein 3882597 ydgJ 5460880 ydgJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423333.1 3882163 R 326423 CDS YP_001423334.1 154688173 5460881 complement(3882736..3883614) 1 NC_009725.1 conserved hypothetical protein YdeO; hypothetical protein 3883614 ydeO 5460881 ydeO Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423334.1 3882736 R 326423 CDS YP_001423335.1 154688174 5460882 complement(3883798..3884250) 1 NC_009725.1 transcription regulator homolog YybA; hypothetical protein 3884250 yybA 5460882 yybA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423335.1 3883798 R 326423 CDS YP_001423336.1 154688175 5460883 3884371..3884802 1 NC_009725.1 conserved hypothetical protein YyaT; hypothetical protein 3884802 yyaT 5460883 yyaT Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423336.1 3884371 D 326423 CDS YP_001423337.1 154688176 5460884 3885154..3886020 1 NC_009725.1 hypothetical protein 3886020 5460884 RBAM_037810 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423337.1 3885154 D 326423 CDS YP_001423338.1 154688177 5461079 complement(3886202..3886603) 1 NC_009725.1 hypothetical protein 3886603 5461079 RBAM_037820 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423338.1 3886202 R 326423 CDS YP_001423339.1 154688178 5461080 complement(3886708..3887616) 1 NC_009725.1 HTH-type transcriptional regulator 3887616 5461080 RBAM_037830 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 HTH-type transcriptional regulator YP_001423339.1 3886708 R 326423 CDS YP_001423340.1 154688179 5461081 3887714..3888520 1 NC_009725.1 catalyzes the formation of acetoacetate from 3-hydroxybutyrate; 3-hydroxybutyrate dehydrogenase 3888520 yxjF1 5461081 yxjF1 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 3-hydroxybutyrate dehydrogenase YP_001423340.1 3887714 D 326423 CDS YP_001423341.1 154688180 5461082 3888774..3889319 1 NC_009725.1 hypothetical protein 3889319 5461082 RBAM_037850 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423341.1 3888774 D 326423 CDS YP_001423342.1 154688181 5461083 3889563..3889733 1 NC_009725.1 hypothetical protein YyaL1; hypothetical protein 3889733 yyaL1 5461083 yyaL1 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423342.1 3889563 D 326423 CDS YP_001423343.1 154688182 5461084 3889880..3890377 1 NC_009725.1 hypothetical protein 3890377 5461084 RBAM_037870 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423343.1 3889880 D 326423 CDS YP_001423344.1 154688183 5461085 3890402..3890812 1 NC_009725.1 conserved hypothetical protei YnaF; hypothetical protein 3890812 ynaF 5461085 ynaF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423344.1 3890402 D 326423 CDS YP_001423345.1 154688184 5459732 3891683..3893002 1 NC_009725.1 hypothetical protein 3893002 5459732 RBAM_037890 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423345.1 3891683 D 326423 CDS YP_001423346.1 154688185 5459733 3893654..3895723 1 NC_009725.1 conserved hypothetical protein YyaL; hypothetical protein 3895723 yyaL 5459733 yyaL Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423346.1 3893654 D 326423 CDS YP_001423347.1 154688186 5459734 complement(3895720..3896616) 1 NC_009725.1 conserved hypothetical protein YyaK; hypothetical protein 3896616 yyaK 5459734 yyaK Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423347.1 3895720 R 326423 CDS YP_001423348.1 154688187 5459735 3896831..3898162 1 NC_009725.1 conserved hypothetical protein YyaJ; hypothetical protein 3898162 yyaJ 5459735 yyaJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423348.1 3896831 D 326423 CDS YP_001423349.1 154688188 5459736 complement(3898195..3898575) 1 NC_009725.1 conserved hypothetical protein YyaH; hypothetical protein 3898575 yyaH 5459736 yyaH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423349.1 3898195 R 326423 CDS YP_001423350.1 154688189 5459737 complement(3898631..3899569) 1 NC_009725.1 catabolite control protein B (CcpB); CcpB 3899569 ccpB 5459737 ccpB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 CcpB YP_001423350.1 3898631 R 326423 CDS YP_001423351.1 154688190 5459738 complement(3899632..3900390) 1 NC_009725.1 exodeoxyribonuclease ExoA; ExoA 3900390 exoA 5459738 exoA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ExoA YP_001423351.1 3899632 R 326423 CDS YP_001423352.1 154688191 5460094 complement(3900387..3900944) 1 NC_009725.1 O-6-methylguanine-DNA alkyltransferase AdaB; AdaB 3900944 adaB 5460094 adaB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 AdaB YP_001423352.1 3900387 R 326423 CDS YP_001423353.1 154688192 5460095 complement(3900941..3901522) 1 NC_009725.1 methylphosphotriester-DNA alkyltransferase AdaA; AdaA 3901522 adaA 5460095 adaA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 AdaA YP_001423353.1 3900941 R 326423 CDS YP_001423354.1 154688193 5460096 complement(3901713..3901958) 1 NC_009725.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 3901958 rpsR 5460096 rpsR Bacillus amyloliquefaciens subsp. plantarum str. FZB42 30S ribosomal protein S18 YP_001423354.1 3901713 R 326423 CDS YP_001423355.1 154688194 5460097 complement(3901996..3902514) 1 NC_009725.1 single-strand DNA-binding protein (Helix-destabilizing protein) Ssb; hypothetical protein 3902514 ssb 5460097 ssb Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423355.1 3901996 R 326423 CDS YP_001423356.1 154688195 5460098 complement(3902554..3902841) 1 NC_009725.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 3902841 rpsF 5460098 rpsF Bacillus amyloliquefaciens subsp. plantarum str. FZB42 30S ribosomal protein S6 YP_001423356.1 3902554 R 326423 CDS YP_001423357.1 154688196 5460099 complement(3902953..3904053) 1 NC_009725.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 3904053 engD 5460099 engD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 GTP-dependent nucleic acid-binding protein EngD YP_001423357.1 3902953 R 326423 CDS YP_001423358.1 154688197 5460100 complement(3904179..3906182) 1 NC_009725.1 conserved hypothetical protein YyaE; hypothetical protein 3906182 yyaE 5460100 yyaE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423358.1 3904179 R 326423 CDS YP_001423359.1 154688198 5461919 complement(3906229..3906435) 1 NC_009725.1 hypothetical protein 3906435 5461919 RBAM_038030 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423359.1 3906229 R 326423 CDS YP_001423360.1 154688199 5461920 complement(3906521..3907525) 1 NC_009725.1 conserved hypothetical protein YyaD; hypothetical protein 3907525 yyaD 5461920 yyaD Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423360.1 3906521 R 326423 CDS YP_001423361.1 154688200 5461921 3907690..3908193 1 NC_009725.1 hypothetical protein 3908193 5461921 RBAM_038050 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423361.1 3907690 D 326423 CDS YP_001423362.1 154688201 5461922 3908368..3908982 1 NC_009725.1 conserved hypothetical protein YyaC; hypothetical protein 3908982 yyaC 5461922 yyaC Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423362.1 3908368 D 326423 CDS YP_001423363.1 154688202 5461923 complement(3909011..3909862) 1 NC_009725.1 stage 0 sporulation protein J (Spo0J); hypothetical protein 3909862 spo0J 5461923 spo0J Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423363.1 3909011 R 326423 CDS YP_001423364.1 154688203 5461924 complement(3909855..3910616) 1 NC_009725.1 sporulation initiation inhibitor protein Soj; hypothetical protein 3910616 soj 5461924 soj Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423364.1 3909855 R 326423 CDS YP_001423365.1 154688204 5461925 complement(3910915..3911766) 1 NC_009725.1 conserved hypothetical protein YyaA; hypothetical protein 3911766 yyaA 5461925 yyaA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423365.1 3910915 R 326423 CDS YP_001423366.1 154688205 5463292 complement(3911888..3912607) 1 NC_009725.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB 3912607 gidB 5463292 gidB Bacillus amyloliquefaciens subsp. plantarum str. FZB42 16S rRNA methyltransferase GidB YP_001423366.1 3911888 R 326423 CDS YP_001423367.1 154688206 5463293 complement(3912621..3914507) 1 NC_009725.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 3914507 gidA 5463293 gidA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA YP_001423367.1 3912621 R 326423 CDS YP_001423368.1 154688207 5463294 complement(3914524..3915903) 1 NC_009725.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 3915903 trmE 5463294 trmE Bacillus amyloliquefaciens subsp. plantarum str. FZB42 tRNA modification GTPase TrmE YP_001423368.1 3914524 R 326423 CDS YP_001423369.1 154688208 5463295 complement(3916192..3916833) 1 NC_009725.1 spoIIIJ-associated proteinJag; hypothetical protein 3916833 jag 5463295 jag Bacillus amyloliquefaciens subsp. plantarum str. FZB42 hypothetical protein YP_001423369.1 3916192 R 326423 CDS YP_001423370.1 154688209 5463296 complement(3916830..3917609) 1 NC_009725.1 involved in biogenesis of membrane proteins; Firmicutes specific proteins are shorter than other bacterial counterparts and have a signal peptide and lipid attachment site; necessary for sporulation; OxaA-like protein precursor 3917609 spoIIIJ 5463296 spoIIIJ Bacillus amyloliquefaciens subsp. plantarum str. FZB42 OxaA-like protein precursor YP_001423370.1 3916830 R 326423 CDS YP_001423371.1 154688210 5463297 complement(3917740..3918090) 1 NC_009725.1 protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P 3918090 rnpA 5463297 rnpA Bacillus amyloliquefaciens subsp. plantarum str. FZB42 ribonuclease P YP_001423371.1 3917740 R 326423 CDS YP_001423372.1 154688211 5463298 complement(3918244..3918378) 1 NC_009725.1 in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 3918378 rpmH 5463298 rpmH Bacillus amyloliquefaciens subsp. plantarum str. FZB42 50S ribosomal protein L34 YP_001423372.1 3918244 R 326423 CDS