-- dump date 20140618_210935 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 326423000001 SEQ_END SEQ_END NC_009725.1 3918589 3918589 DR NC_009725.1; contig end 3918589..3918589 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 YP_001419680.1 CDS dnaA NC_009725.1 412 1752 D binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 412..1752 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463240 YP_001419681.1 CDS dnaN NC_009725.1 1937 3073 D binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 1937..3073 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461743 YP_001419682.1 CDS yaaA NC_009725.1 3208 3423 D conserved hypothetical protein YaaA; hypothetical protein 3208..3423 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461744 YP_001419683.1 CDS recF NC_009725.1 3439 4551 D Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F 3439..4551 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461745 YP_001419684.1 CDS yaaB NC_009725.1 4569 4814 D hypothetical protein YaaB; hypothetical protein 4569..4814 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459841 YP_001419685.1 CDS gyrB NC_009725.1 4871 6787 D negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 4871..6787 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461732 YP_001419686.1 CDS gyrA NC_009725.1 7081 9462 D negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 7081..9462 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461733 YP_001419687.1 CDS yaaC NC_009725.1 14626 15576 R hypothetical protein YaaC; hypothetical protein complement(14626..15576) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462526 YP_001419688.1 CDS guaB NC_009725.1 15697 17163 D catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase 15697..17163 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462527 YP_001419689.1 CDS dacA NC_009725.1 17316 18647 D serine-type D-ala-D-ala carboxypeptidase DacA; DacA 17316..18647 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462528 YP_001419690.1 CDS pdxS NC_009725.1 18845 19729 D with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate; pyridoxal biosynthesis lyase PdxS 18845..19729 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462529 YP_001419691.1 CDS pdxT NC_009725.1 19751 20341 D with PdxST is involved in the biosynthesis of pyridoxal 5'-phosphate; PdxT catalyzes the hydrolysis of glutamine to glutamate and ammonia; PdxS utilizes the ammonia to synthesize pyridoxal 5'-phosphate; glutamine amidotransferase subunit PdxT 19751..20341 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460157 YP_001419692.1 CDS serS NC_009725.1 20661 21938 D catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 20661..21938 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460158 YP_001419693.1 CDS glxK NC_009725.1 21949 23094 R glycerate kinase GlxK; GlxK complement(21949..23094) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460159 YP_001419694.1 CDS dcK NC_009725.1 23535 24188 R deoxyadenosine/deoxycytidine kinase DcK; deoxyadenosine/deoxycytidine kinase complement(23535..24188) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460161 YP_001419695.1 CDS dgk NC_009725.1 24185 24808 R deoxyguanosine kinase Dgk; deoxyguanosine kinase complement(24185..24808) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461402 YP_001419696.1 CDS yaaH NC_009725.1 24904 26184 R hypothetical protein YaaH; hypothetical protein complement(24904..26184) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461403 YP_001419697.1 CDS yaaI NC_009725.1 26259 26810 R isochorismatase homolog YaaI; hypothetical protein complement(26259..26810) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461404 YP_001419698.1 CDS yaaJ NC_009725.1 26893 27375 D cytidine/deoxycytidylate deaminase YaaJ; hypothetical protein 26893..27375 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461405 YP_001419699.1 CDS dnaX NC_009725.1 27858 29549 D catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau 27858..29549 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461407 YP_001419700.1 CDS yaaK NC_009725.1 29568 29897 D hypothetical protein YaaK; hypothetical protein 29568..29897 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459709 YP_001419701.1 CDS recR NC_009725.1 29912 30508 D involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 29912..30508 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459710 YP_001419702.1 CDS yaaL NC_009725.1 30527 30751 D hypothetical protein YaaL; hypothetical protein 30527..30751 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459711 YP_001419703.1 CDS bofA NC_009725.1 30812 31075 D inhibitor of the pro-sigma-K processing machinery BofA; BofA 30812..31075 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459712 YP_001419704.1 CDS csfB NC_009725.1 36321 36515 D hypothetical protein CsfB; hypothetical protein 36321..36515 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459621 YP_001419705.1 CDS xpaC NC_009725.1 36663 37277 D 5-bromo 4-chloroindolyl phosphate (X-phos) hydrolysis protein XpaC; XpaC 36663..37277 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459622 YP_001419706.1 CDS yaaN NC_009725.1 37293 38411 D hypothetical protein YaaN; hypothetical protein 37293..38411 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459940 YP_001419707.1 CDS yaaO NC_009725.1 38489 39922 D conserved hypothetical protein YaaO; hypothetical protein 38489..39922 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459941 YP_001419708.1 CDS tmk NC_009725.1 39919 40557 D catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase 39919..40557 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459942 YP_001419709.1 CDS yaaQ NC_009725.1 40628 40957 D conserved hypothetical protein YaaQ; hypothetical protein 40628..40957 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459943 YP_001419710.1 CDS yaaR NC_009725.1 40970 41410 D conserved hypothetical protein YaaR; hypothetical protein 40970..41410 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459944 YP_001419711.1 CDS holB NC_009725.1 41422 42411 D catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' 41422..42411 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459945 YP_001419712.1 CDS yaaT NC_009725.1 42414 43241 D signal peptidase II homolog YaaT; hypothetical protein 42414..43241 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461552 YP_001419713.1 CDS yabA NC_009725.1 43256 43615 D in Bacillus subtilis this protein is involved in the negative regulation of DNA replication initiation; interacts with DnaN and DnaA; DNA replication intiation control protein YabA 43256..43615 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461553 YP_001419714.1 CDS yabB NC_009725.1 43676 44419 D conserved hypothetical protein YabB; hypothetical protein 43676..44419 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461554 YP_001419715.1 CDS yazA NC_009725.1 44406 44705 D conserved hypothetical protein YazA; GIY-YIG nuclease superfamily protein 44406..44705 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461555 YP_001419716.1 CDS yabC NC_009725.1 44680 45561 D conserved hypothetical protein YabC; hypothetical protein 44680..45561 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461556 YP_001419717.1 CDS abrB NC_009725.1 45611 45895 R transition state regulator; COG2002; regulation of stationary/sporulation gene expression; transcriptional control of biofilm formation; hypothetical protein complement(45611..45895) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461557 YP_001419718.1 CDS metS NC_009725.1 46385 48376 D methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 46385..48376 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461779 YP_001419719.1 CDS yabD NC_009725.1 48449 49219 D deoxyribonuclease YabD; hypothetical protein 48449..49219 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461780 YP_001419720.1 CDS yabE NC_009725.1 49318 50679 D conserved hypothetical protein YabE; hypothetical protein 49318..50679 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461781 YP_001419721.1 CDS rnmV NC_009725.1 50814 51377 D ribonuclease M5 RnmV; RnmV 50814..51377 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461782 YP_001419722.1 CDS ksgA NC_009725.1 51367 52248 D catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 51367..52248 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461783 YP_001419723.1 CDS yabG NC_009725.1 52421 53296 D sporulation specific peptidase YabG; hypothetical protein 52421..53296 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461784 YP_001419724.1 CDS veg NC_009725.1 53508 53768 D conserved hypothetical protein Veg; hypothetical protein 53508..53768 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459663 YP_001419725.1 CDS sspF NC_009725.1 53931 54119 D small acid-soluble spore protein (alpha/beta-type SASP) SspF; SspF 53931..54119 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459664 YP_001419726.1 CDS ipk NC_009725.1 54263 55132 D An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 54263..55132 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459665 YP_001419727.1 CDS purR NC_009725.1 55188 56045 D pur operon repressor PurR; pur operon repressor 55188..56045 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459666 YP_001419728.1 CDS yabJ NC_009725.1 56042 56422 D conserved hypothetical protein YabJ; hypothetical protein 56042..56422 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459667 YP_001419729.1 CDS spoVG NC_009725.1 56618 56911 D stage V sporulation protein G; essential for spore formation and a negative regulator of asymmetric septation in Bacillus; involved in methicillin-resistance, biofilm formation and capsular polysaccharide synthesis in Staphylococcus; regulatory protein SpoVG 56618..56911 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459668 YP_001419730.1 CDS glmU NC_009725.1 57103 58473 D forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 57103..58473 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462747 YP_001419731.1 CDS prs NC_009725.1 58495 59448 D catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase 58495..59448 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462748 YP_001419732.1 CDS ctc NC_009725.1 59533 60141 D the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25 59533..60141 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462749 YP_001419733.1 CDS spoVC NC_009725.1 60226 60792 D Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 60226..60792 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462750 YP_001419734.1 CDS yabK NC_009725.1 60854 61084 D hypothetical protein YabK; hypothetical protein 60854..61084 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462751 YP_001419735.1 CDS mfd NC_009725.1 61154 64687 D transcription-repair coupling factor Mfd; hypothetical protein 61154..64687 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463260 YP_001419736.1 CDS spoVT NC_009725.1 64824 65360 D stage V sporulation protein sSpoVT; SpoVT 64824..65360 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463261 YP_001419737.1 CDS yabM NC_009725.1 65529 67109 D amino acid transport protein YabM; hypothetical protein 65529..67109 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463262 YP_001419738.1 CDS yabN NC_009725.1 67099 68574 D conserved hypothetical protein YabN; hypothetical protein 67099..68574 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463263 YP_001419739.1 CDS yabO NC_009725.1 68576 68836 D conserved hypothetical protein YabO; hypothetical protein 68576..68836 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463264 YP_001419740.1 CDS yabP NC_009725.1 68915 69217 D hypothetical protein YabP; hypothetical protein 68915..69217 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462208 YP_001419741.1 CDS yabQ NC_009725.1 69214 69849 D hypothetical protein YabQ; hypothetical protein 69214..69849 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462209 YP_001419742.1 CDS divIC NC_009725.1 69867 70244 D cell-division initiation protein DivIC; DivIC 69867..70244 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462210 YP_001419743.1 CDS yabR NC_009725.1 70325 70711 D polyribonucleotide nucleotidyltransferase YabR; hypothetical protein 70325..70711 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462211 YP_001419744.1 CDS spoIIE NC_009725.1 71237 73726 D sporulation stage II protein pSpoIIE; SpoIIE 71237..73726 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460849 YP_001419745.1 CDS yabS NC_009725.1 73794 74531 D hypothetical protein YabS; hypothetical protein 73794..74531 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460850 YP_001419746.1 CDS yabT NC_009725.1 74497 75498 D probable serine/threonine-protein kinase YabT; hypothetical protein 74497..75498 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459935 YP_001419747.1 CDS yacA NC_009725.1 75603 77021 D conserved hypothetical protein YacA; hypothetical protein 75603..77021 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459936 YP_001419748.1 CDS hprT NC_009725.1 77018 77557 D hypoxanthine-guanine phosphoribosyltransferase HprT; HprT 77018..77557 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459937 YP_001419749.1 CDS ftsH NC_009725.1 77655 79574 D cell division protein and general stress protein(class III heat-shock protein) FtsH; hypothetical protein 77655..79574 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459938 YP_001419750.1 CDS yacB NC_009725.1 79723 80499 D type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase 79723..80499 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459939 YP_001419751.1 CDS hslO NC_009725.1 80510 81385 D becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers; Hsp33-like chaperonin 80510..81385 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462548 YP_001419752.1 CDS yacD NC_009725.1 81431 82321 D protein secretion protein prsA homolog YacD; hypothetical protein 81431..82321 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462549 YP_001419753.1 CDS cysK NC_009725.1 82397 83323 D cysteine synthetase A CysK; hypothetical protein 82397..83323 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462550 YP_001419754.1 CDS pabB NC_009725.1 83488 84903 D para-aminobenzoate synthase chain A PabB; PabB 83488..84903 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462551 YP_001419755.1 CDS pabA NC_009725.1 84919 85506 D amphibolic enzyme subunit from Bacillus subtilis performs both in anthranilate and para-aminobenzoate synthesis; para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II 84919..85506 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462552 YP_001419756.1 CDS pabC NC_009725.1 85503 86387 D catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate; 4-amino-4-deoxychorismate lyase 85503..86387 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462300 YP_001419757.1 CDS sul NC_009725.1 86368 87225 D dihydropteroate synthase Sul; Sul 86368..87225 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462301 YP_001419758.1 CDS folA NC_009725.1 87218 87580 D dihydroneopterin aldolase FolA; hypothetical protein 87218..87580 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462302 YP_001419759.1 CDS folK NC_009725.1 87577 88080 D 7,8-dihydro-6-hydroxymethylpterin pyrophosphokinase FolK; hypothetical protein 87577..88080 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462303 YP_001419760.1 CDS yacF NC_009725.1 88263 89264 D probable tRNA-dihydrouridine synthase I YacF; hypothetical protein 88263..89264 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462304 YP_001419761.1 CDS lysS NC_009725.1 89354 90853 D class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 89354..90853 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460180 YP_001419762.1 CDS ctsR NC_009725.1 102172 102636 D transcriptional regulator CtsR; hypothetical protein 102172..102636 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459805 YP_001419763.1 CDS mcsA NC_009725.1 102650 103207 D modulation of CtsR repression protein McsA; McsA 102650..103207 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459806 YP_001419764.1 CDS mcsB NC_009725.1 103207 104298 D modulation of CtsR repressionprotein McsB; ATP:guanido phosphotransferase 103207..104298 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459807 YP_001419765.1 CDS clpC NC_009725.1 104295 106727 D class III stress response-related ATPase ClpC; ClpC 104295..106727 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459808 YP_001419766.1 CDS radA NC_009725.1 106822 108201 D Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 106822..108201 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460282 YP_001419767.1 CDS yacK NC_009725.1 108205 109287 D non-specific DNA-binding; scans chromosomes during sporulation for DNA-damage; delays initiation of sporulation; participates in a checkpoint signaling cascade for cell-cycle progression and DNA repair; DNA integrity scanning protein DisA 108205..109287 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460283 YP_001419768.1 CDS yacL NC_009725.1 109401 110501 D conserved hypothetical protein YacL; hypothetical protein 109401..110501 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460284 YP_001419769.1 CDS ispD NC_009725.1 110514 111212 D 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 110514..111212 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460285 YP_001419770.1 CDS ispF NC_009725.1 111205 111681 D catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 111205..111681 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460286 YP_001419771.1 CDS gltX NC_009725.1 111773 113224 D Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 111773..113224 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460825 YP_001419772.1 CDS cysE NC_009725.1 113535 114188 D serine acetyltransferase CysE; hypothetical protein 113535..114188 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460826 YP_001419773.1 CDS cysS NC_009725.1 114185 115585 D catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 114185..115585 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460827 YP_001419774.1 CDS yazC NC_009725.1 115590 116021 D conserved hypothetical protein YazC; hypothetical protein 115590..116021 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460828 YP_001419775.1 CDS yacO NC_009725.1 116005 116754 D conserved hypothetical protein YacO; hypothetical protein 116005..116754 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460829 YP_001419776.1 CDS yacP NC_009725.1 116761 117273 D conserved hypothetical protein YacP; hypothetical protein 116761..117273 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462243 YP_001419777.1 CDS sigH NC_009725.1 117336 117992 D sigma factor H; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; RNA polymerase factor sigma-70 117336..117992 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462244 YP_001419778.1 CDS rpmG NC_009725.1 118078 118227 D in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group have the CXXC motif; 50S ribosomal protein L33 118078..118227 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462245 YP_001419779.1 CDS secE NC_009725.1 118260 118439 D forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 118260..118439 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462246 YP_001419780.1 CDS nusG NC_009725.1 118606 119139 D Modulates Rho-dependent transcription termination; transcription antitermination protein NusG 118606..119139 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462247 YP_001419781.1 CDS rplK NC_009725.1 119307 119732 D binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 119307..119732 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462874 YP_001419782.1 CDS rplA NC_009725.1 119827 120525 D in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 119827..120525 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462875 YP_001419783.1 CDS rplJ NC_009725.1 120780 121280 D binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 120780..121280 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462876 YP_001419784.1 CDS rplL NC_009725.1 121322 121693 D present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 121322..121693 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462877 YP_001419785.1 CDS ybxB NC_009725.1 121785 122390 D hypothetical protein YbxB; hypothetical protein 121785..122390 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462878 YP_001419786.1 CDS rpoB NC_009725.1 122626 126216 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 122626..126216 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459527 YP_001419787.1 CDS rpoC NC_009725.1 126279 129878 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 126279..129878 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459528 YP_001419788.1 CDS ybxF NC_009725.1 130047 130295 D in Bacillus subtilis this non-essential protein associates with the ribosome; ribosomal protein L7Ae-like 130047..130295 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459529 YP_001419789.1 CDS rpsL NC_009725.1 130411 130827 D interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 130411..130827 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459530 YP_001419790.1 CDS rpsG NC_009725.1 130867 131337 D binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 130867..131337 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459531 YP_001419791.1 CDS fusA NC_009725.1 131390 133468 D EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 131390..133468 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461278 YP_001419792.1 CDS tufA NC_009725.1 133588 134778 D elongation factor EF-Tu; EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 133588..134778 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461279 YP_001419793.1 CDS ybaC NC_009725.1 134882 135847 D hypothetical protein YbaC; YbaC 134882..135847 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461280 YP_001419794.1 CDS rpsJ NC_009725.1 136096 136404 D NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 136096..136404 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461281 YP_001419795.1 CDS rplC NC_009725.1 136444 137073 D binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 136444..137073 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461282 YP_001419796.1 CDS rplD NC_009725.1 137101 137724 D L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 137101..137724 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460901 YP_001419797.1 CDS rplW NC_009725.1 137724 138011 D binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 137724..138011 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460902 YP_001419798.1 CDS rplB NC_009725.1 138043 138876 D one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 138043..138876 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460903 YP_001419799.1 CDS rpsS NC_009725.1 138934 139212 D protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 138934..139212 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460904 YP_001419800.1 CDS rplV NC_009725.1 139229 139570 D binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 139229..139570 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460905 YP_001419801.1 CDS rpsC NC_009725.1 139574 140230 D forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 139574..140230 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459895 YP_001419802.1 CDS rplP NC_009725.1 140232 140666 D located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 140232..140666 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459896 YP_001419803.1 CDS rpmC NC_009725.1 140656 140856 D one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 140656..140856 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459897 YP_001419804.1 CDS rpsQ NC_009725.1 140879 141142 D primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 140879..141142 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459898 YP_001419805.1 CDS rplN NC_009725.1 141183 141551 D binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 141183..141551 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459899 YP_001419806.1 CDS rplX NC_009725.1 141588 141899 D assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 141588..141899 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459688 YP_001419807.1 CDS rplE NC_009725.1 141926 142465 D part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 141926..142465 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459689 YP_001419808.1 CDS rpsN NC_009725.1 142488 142673 D located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif; 30S ribosomal protein S14 142488..142673 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459690 YP_001419809.1 CDS rpsH NC_009725.1 142705 143103 D binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 142705..143103 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459691 YP_001419810.1 CDS rplF NC_009725.1 143134 143673 D ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 143134..143673 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459692 YP_001419811.1 CDS rplR NC_009725.1 143708 144070 D binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 143708..144070 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461752 YP_001419812.1 CDS rpsE NC_009725.1 144089 144595 D located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 144089..144595 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461753 YP_001419813.1 CDS rpmD NC_009725.1 144609 144788 D L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 144609..144788 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461754 YP_001419814.1 CDS rplO NC_009725.1 144819 145259 D late assembly protein; 50S ribosomal protein L15 144819..145259 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461755 YP_001419815.1 CDS secY NC_009725.1 145261 146556 D forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 145261..146556 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461756 YP_001419816.1 CDS adk NC_009725.1 146608 147261 D essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 146608..147261 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460952 YP_001419817.1 CDS map NC_009725.1 147258 148004 D catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase 147258..148004 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460953 YP_001419818.1 CDS infA NC_009725.1 148329 148547 D stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 148329..148547 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460954 YP_001419819.1 CDS rpmJ NC_009725.1 148581 148694 D smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 148581..148694 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460955 YP_001419820.1 CDS rpsM NC_009725.1 148717 149082 D located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 148717..149082 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460956 YP_001419821.1 CDS rpsK NC_009725.1 149103 149498 D located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 149103..149498 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461293 YP_001419822.1 CDS rpoA NC_009725.1 149675 150619 D catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 149675..150619 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461294 YP_001419823.1 CDS rplQ NC_009725.1 150697 151059 D is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 150697..151059 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461295 YP_001419824.1 CDS cbiO NC_009725.1 151191 152036 D with CbiNQ forms the ABC transporter for cobalt import; Bacillus spp. have two adjacent copies of this gene; cobalt transporter ATP-binding subunit 151191..152036 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461296 YP_001419825.1 CDS cbiO NC_009725.1 152051 152881 D with CbiNQ forms the ABC transporter for cobalt import; Bacillus spp. have two adjacent copies of this gene; cobalt transporter ATP-binding subunit 152051..152881 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461297 YP_001419826.1 CDS ybaF NC_009725.1 152878 153675 D ABC transporter (pemease) YbaF; YbaF 152878..153675 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459752 YP_001419827.1 CDS truA NC_009725.1 153688 154431 D mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 153688..154431 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459753 YP_001419828.1 CDS rplM NC_009725.1 154591 155028 D in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 154591..155028 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459754 YP_001419829.1 CDS rpsI NC_009725.1 155049 155441 D forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 155049..155441 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459755 YP_001419830.1 CDS ybaJ NC_009725.1 155579 156346 D hypothetical protein YbaJ; YbaJ 155579..156346 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459756 YP_001419831.1 CDS yizA NC_009725.1 156360 156833 R conserved hypothetical protein YizA; hypothetical protein complement(156360..156833) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460890 YP_001419832.1 CDS ybaK NC_009725.1 156964 157407 D hypothetical protein YbaK; YbaK 156964..157407 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460891 YP_001419833.1 CDS cwlD NC_009725.1 157468 158181 D n-acetylmuramoyl-L-alanine amidase CwlD; hypothetical protein 157468..158181 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460892 YP_001419834.1 CDS ybaL NC_009725.1 158261 159313 D ATP-binding mrp-like protein YbaL; hypothetical protein 158261..159313 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460893 YP_001419835.1 CDS gerD NC_009725.1 159346 159903 R germination response protein precursor GerD; GerD complement(159346..159903) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460894 YP_001419836.1 CDS kbaA NC_009725.1 160011 160607 D kinB sporulation signaling pathway activator KbaA; KbaA 160011..160607 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460234 YP_001419837.1 CDS ybaN NC_009725.1 160608 161372 R polysaccharide deacetylase YbaN; hypothetical protein complement(160608..161372) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460235 YP_001419838.1 CDS glcP1 NC_009725.1 176901 178115 R glucose/mannose:H+ symporter/fucose permease GlcP1; GlcP1 complement(176901..178115) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462504 YP_001419839.1 CDS gabT1 NC_009725.1 178332 179609 D 4-aminobutyrate aminotransferase GabT1; GabT1 178332..179609 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462505 YP_001419840.1 CDS yktc1 NC_009725.1 179606 180556 D fructose-1,6 biphosphatase/inositol monophosphatase Yktc1; hypothetical protein 179606..180556 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462506 YP_001419841.1 CDS gutB1 NC_009725.1 180531 181577 D zinc-binding dehydrogenase GutB1; GutB1 180531..181577 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462507 YP_001419842.1 CDS ybaR NC_009725.1 181938 183242 D sulfate permease YbaR; hypothetical protein 181938..183242 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461636 YP_001419843.1 CDS ybaS NC_009725.1 183351 184334 D sodium dependent transporter YbaS; hypothetical protein 183351..184334 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461637 YP_001419844.1 CDS ybaA NC_009725.1 184323 184955 R hypothetical protein YbaA; YbaA complement(184323..184955) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461638 YP_001419845.1 CDS feuC NC_009725.1 185072 186094 R iron-uptake system permease protein FeuC; FeuC complement(185072..186094) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461639 YP_001419846.1 CDS feuB NC_009725.1 186084 187091 R iron-uptake system permease protein FeuB; FeuB complement(186084..187091) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461640 YP_001419847.1 CDS feuA NC_009725.1 187111 188067 R iron-binding protein FeuA complement(187111..188067) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461581 YP_001419848.1 CDS ybbB NC_009725.1 188155 189750 R transcription regulator (AraC/XylS family) YbbB; hypothetical protein complement(188155..189750) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461582 YP_001419849.1 CDS ybbC NC_009725.1 189888 191132 R conserved hypothetical protein YbbC; hypothetical protein complement(189888..191132) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461583 YP_001419850.1 CDS ybbD NC_009725.1 191148 193061 R beta-hexosaminidase YbbD; hypothetical protein complement(191148..193061) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461584 YP_001419851.1 CDS ybbE NC_009725.1 193108 194391 R beta-lactamase YbbE; hypothetical protein complement(193108..194391) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461585 YP_001419852.1 CDS ybbF NC_009725.1 194410 195777 R sucrose phosphotransferase enzyme II YbbF; hypothetical protein complement(194410..195777) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462441 YP_001419853.1 CDS murQ NC_009725.1 195906 196835 R catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway; N-acetylmuramic acid-6-phosphate etherase complement(195906..196835) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462442 YP_001419854.1 CDS ybbJ NC_009725.1 196935 197411 R hypothetical protein YbbJ; hypothetical protein complement(196935..197411) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462443 YP_001419855.1 CDS ybbK NC_009725.1 197430 197882 R conserved hypothetical protein YbbK; hypothetical protein complement(197430..197882) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462444 YP_001419856.1 CDS sigW NC_009725.1 198702 199265 D RNA-polymerase ECF sigma factor W; Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription: this protein is involved in detoxification and protection against antimicrobial; RNA polymerase sigma factor SigW 198702..199265 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460203 YP_001419857.1 CDS ybbM NC_009725.1 199279 199905 D predicted transmembrane transcriptional regulator (anti-sigma W factor) YbbM; hypothetical protein 199279..199905 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460127 YP_001419858.1 CDS ybbP NC_009725.1 200071 200892 D conserved hypothetical protein YbbP; hypothetical protein 200071..200892 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460128 YP_001419859.1 CDS ybbR NC_009725.1 200885 202324 D conserved hypothetical protein YbbR; hypothetical protein 200885..202324 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460129 YP_001419860.1 CDS glmM NC_009725.1 202342 203688 D catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 202342..203688 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460130 YP_001419861.1 CDS RBAM_002310 NC_009725.1 203774 203974 D hypothetical protein 203774..203974 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460131 YP_001419862.1 CDS glmS NC_009725.1 204120 205922 D Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 204120..205922 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460538 YP_001419863.1 CDS RBAM_002330 NC_009725.1 206567 207439 D ATP binding protein of ABC transporter 206567..207439 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460539 YP_001419864.1 CDS RBAM_002340 NC_009725.1 207417 208070 D hypothetical protein 207417..208070 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460540 YP_001419865.1 CDS RBAM_002350 NC_009725.1 208173 208373 R hypothetical protein complement(208173..208373) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460541 YP_001419866.1 CDS RBAM_002360 NC_009725.1 208417 208575 D hypothetical protein 208417..208575 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460542 YP_001419867.1 CDS RBAM_002370 NC_009725.1 208858 208989 D hypothetical protein 208858..208989 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461774 YP_001419868.1 CDS RBAM_002380 NC_009725.1 209089 209772 D member of the two componenent signal transduction system containing the sensor IM histidine kinase RBAM02390; two-component response regulator 209089..209772 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461775 YP_001419869.1 CDS RBAM_002390 NC_009725.1 209769 210791 D membrane bound sensor kinase; probably linked with the response regulator RBAM002380; two-component sensor histidine kinase 209769..210791 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461776 YP_001419870.1 CDS RBAM_002400 NC_009725.1 211982 212746 D peptide ABC transporter ATPase 211982..212746 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461777 YP_001419871.1 CDS RBAM_002410 NC_009725.1 212733 214661 D ABC-type transport system,permease 212733..214661 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461778 YP_001419872.1 CDS ybdO1 NC_009725.1 215120 215332 D hypothetical protein YbdO1; hypothetical protein 215120..215332 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461273 YP_001419873.1 CDS kdgR1 NC_009725.1 215385 216230 R 2,5-diketo-D-gluconic acid reductase KdgR1; KdgR1 complement(215385..216230) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461274 YP_001419874.1 CDS yxaC NC_009725.1 216341 217033 R conserved hypothetical protein YxaC; hypothetical protein complement(216341..217033) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461275 YP_001419875.1 CDS yxaD NC_009725.1 217604 218035 D transcriptional regulator YxaD; hypothetical protein 217604..218035 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461276 YP_001419876.1 CDS ybxG NC_009725.1 218460 219845 D proline-specific permease#YbxG; hypothetical protein 218460..219845 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461277 YP_001419877.1 CDS yfnB NC_009725.1 219938 220408 D hypothetical protein YfnB; hypothetical protein 219938..220408 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462430 YP_001419878.1 CDS RBAM_002480 NC_009725.1 220661 221791 D together with response regulator RBAM002490 part of a two component signal transduction system; sensory transduction protein kinase 220661..221791 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462431 YP_001419879.1 CDS RBAM_002490 NC_009725.1 221796 222440 D together with the sensor histidine kinase RBAM02480 part of a two component signal transduction system; two-component response regulator 221796..222440 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462432 YP_001419880.1 CDS yfiL NC_009725.1 222581 223516 D ABC transporter (ATP-binding protein) YfiL; hypothetical protein 222581..223516 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462433 YP_001419881.1 CDS yfiM NC_009725.1 223525 224712 D ABC transporter, permease component YfiM; hypothetical protein 223525..224712 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462434 YP_001419882.1 CDS yfiN1 NC_009725.1 224709 225851 D ABC-type multidrug transport system, permease component YfiN1; hypothetical protein 224709..225851 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461769 YP_001419883.1 CDS RBAM_002530 NC_009725.1 225865 226044 D hypothetical protein 225865..226044 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461770 YP_001419884.1 CDS yolA1 NC_009725.1 226148 226624 D hypothetical protein YolA1; hypothetical protein 226148..226624 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461771 YP_001419885.1 CDS csgA NC_009725.1 226702 226953 D sporulation-specific SASP protein CsgA; hypothetical protein 226702..226953 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461772 YP_001419886.1 CDS yqeB NC_009725.1 227063 227761 D hypothetical protein YqeB; hypothetical protein 227063..227761 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461773 YP_001419887.1 CDS ybyB NC_009725.1 227807 228067 R hypothetical protein YbyB; hypothetical protein complement(227807..228067) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462083 YP_001419888.1 CDS ybeC NC_009725.1 228235 229872 D hypothetical protein YbeC; hypothetical protein 228235..229872 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462084 YP_001419889.1 CDS RBAM_002590 NC_009725.1 230404 231606 D hypothetical protein 230404..231606 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462085 YP_001419890.1 CDS glpQ NC_009725.1 232111 232998 R glycerophosphoryl diester phosphodiesterase GlpQ; GlpQ complement(232111..232998) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462086 YP_001419891.1 CDS glpT NC_009725.1 233094 234428 R glycerol-3-phosphate permease GlpT; GlpT complement(233094..234428) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462087 YP_001419892.1 CDS ybeF NC_009725.1 234763 235005 D hypothetical protein YbeF; hypothetical protein 234763..235005 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462792 YP_001419893.1 CDS yoaI NC_009725.1 235061 236182 R 4-hydroxyphenylacetate-3-hydroxylase YoaI; hypothetical protein complement(235061..236182) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462793 YP_001419894.1 CDS ybfE NC_009725.1 236656 236982 R hypothetical protein YbfE; hypothetical protein complement(236656..236982) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462794 YP_001419895.1 CDS ybfG NC_009725.1 237154 239328 R conserved hypothetical protein YbfG; hypothetical protein complement(237154..239328) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462795 YP_001419896.1 CDS RBAM_002660 NC_009725.1 239702 240145 D hypothetical protein 239702..240145 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462796 YP_001419897.1 CDS RBAM_002670 NC_009725.1 240410 240880 D hypothetical protein 240410..240880 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462781 YP_001419898.1 CDS RBAM_002680 NC_009725.1 240952 242022 D Iron-containing alcohol dehydrogenase 240952..242022 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462782 YP_001419899.1 CDS purT NC_009725.1 242104 243258 D non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis; phosphoribosylglycinamide formyltransferase 2 242104..243258 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462783 YP_001419900.1 CDS pssA NC_009725.1 243736 244269 D phosphatidylserine synthase PssA; hypothetical protein 243736..244269 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462784 YP_001419901.1 CDS ybfM NC_009725.1 244260 244748 D alkaline phosphatase YbfM; hypothetical protein 244260..244748 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462785 YP_001419902.1 CDS psd NC_009725.1 244741 245556 D catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine; phosphatidylserine decarboxylase 244741..245556 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461819 YP_001419903.1 CDS ybfN NC_009725.1 245590 245874 D hypothetical protein YbfN; hypothetical protein 245590..245874 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461820 YP_001419904.1 CDS ybfQ NC_009725.1 245979 246947 D conserved hypothetical protein YbfQ; hypothetical protein 245979..246947 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461821 YP_001419905.1 CDS gltP NC_009725.1 246983 248233 R proton/glutamate symport protein GltP; hypothetical protein complement(246983..248233) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461822 YP_001419906.1 CDS ybgE NC_009725.1 248600 249670 D catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 248600..249670 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461823 YP_001419907.1 CDS ybgF NC_009725.1 249711 251114 R histidine permease YbgF; hypothetical protein complement(249711..251114) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461797 YP_001419908.1 CDS mmuM NC_009725.1 251228 252175 R converts homocysteine and S-adenosyl-methionine to methionine and S-adenosyl-homocysteine or S-methyl-methionine and homocysteine to two methionines; homocysteine methyltransferase complement(251228..252175) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461798 YP_001419909.1 CDS ybgH NC_009725.1 252291 253727 R sodium/proton-dependent alanine transporter YbgH; hypothetical protein complement(252291..253727) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461799 YP_001419910.1 CDS ybgJ NC_009725.1 253752 254735 R catalyzes the formation of glutamate from glutamine; glutaminase complement(253752..254735) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461800 YP_001419911.1 CDS ycbA NC_009725.1 255030 256271 D sensor histidine kinase; transcriptional control of biofilm formation; hypothetical protein 255030..256271 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461801 YP_001419912.1 CDS ycbB NC_009725.1 256273 257220 D two-component response regulator involved in biofilm formation; hypothetical protein 256273..257220 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461576 YP_001419913.1 CDS RBAM_002830 NC_009725.1 257255 257461 D hypothetical protein 257255..257461 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461577 YP_001419914.1 CDS rtpA NC_009725.1 257807 258013 D tryptophan RNA-binding attenuator protein inhibitory protein RtpA (YczA); RtpA 257807..258013 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461578 YP_001419915.1 CDS RBAM_002850 NC_009725.1 258129 258359 D hypothetical protein 258129..258359 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461579 YP_001419916.1 CDS ydfM NC_009725.1 258469 259362 R cation efflux transporter YdfM; hypothetical protein complement(258469..259362) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461580 YP_001419917.1 CDS ydfN NC_009725.1 259790 260410 D NAD(P)H nitroreductase YdfN; hypothetical protein 259790..260410 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461824 YP_001419918.1 CDS ydfO NC_009725.1 260435 261373 D glyoxylase family protein YdfO; hypothetical protein 260435..261373 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461825 YP_001419919.1 CDS ydfP NC_009725.1 261504 261893 D conserved hypothetical protein YdfP; hypothetical protein 261504..261893 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461826 YP_001419920.1 CDS ydfQ NC_009725.1 262073 262411 D thioredoxin like protein YdfQ; hypothetical protein 262073..262411 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461827 YP_001419921.1 CDS ycbP NC_009725.1 262475 262858 R hypothetical protein YcbP; hypothetical protein complement(262475..262858) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461828 YP_001419922.1 CDS cwlJ NC_009725.1 263012 263440 D cell wall hydrolase CwlJ; hypothetical protein 263012..263440 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461283 YP_001419923.1 CDS phoD NC_009725.1 263704 265455 D phosphodiesterase/alkaline phosphatase PhoD; PhoD 263704..265455 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461284 YP_001419924.1 CDS tatAD NC_009725.1 265468 265665 D sec-independent protein translocase protein TatAD; TatAD 265468..265665 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461285 YP_001419925.1 CDS tatCD NC_009725.1 265727 266452 D sec-independent protein translocase protein TatCD; TatCD 265727..266452 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461286 YP_001419926.1 CDS pcp NC_009725.1 266449 267096 R catalyzes the removal of 5-oxoproline from various penultimate amino acid residues except L-proline; pyrrolidone-carboxylate peptidase complement(266449..267096) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461287 YP_001419927.1 CDS ycbU NC_009725.1 267168 268295 D selenocysteine lyase YcbU; hypothetical protein 267168..268295 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462183 YP_001419928.1 CDS lmrB NC_009725.1 268331 269764 R drug-export protein LmrB; LmrB complement(268331..269764) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462184 YP_001419929.1 CDS lmrA NC_009725.1 269807 270373 R transcription repressor of lincomycin operon LmrA; LmrA complement(269807..270373) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462185 YP_001419930.1 CDS yccC NC_009725.1 270551 271666 D asparaginase YccC; hypothetical protein 270551..271666 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462186 YP_001419931.1 CDS lip NC_009725.1 271863 272507 D triacylglycerol lipase Lip; Lip 271863..272507 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462187 YP_001419932.1 CDS yccF NC_009725.1 272644 273714 D conserved hypothetical protein YccF; hypothetical protein 272644..273714 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463218 YP_001419933.1 CDS yccK NC_009725.1 273845 274777 D conserved hypothetical YccK; hypothetical protein 273845..274777 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463219 YP_001419934.1 CDS ycdA NC_009725.1 274821 275816 R hypothetical protein YcdA; hypothetical protein complement(274821..275816) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463220 YP_001419935.1 CDS ycdB NC_009725.1 275940 277343 D hypothetical protein YcdB; hypothetical protein 275940..277343 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463221 YP_001419936.1 CDS ycdC NC_009725.1 277535 278902 D hypothetical protein YcdC; hypothetical protein 277535..278902 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463222 YP_001419937.1 CDS ycdD NC_009725.1 278899 279402 R hypothetical protein YcdD; hypothetical protein complement(278899..279402) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463305 YP_001419938.1 CDS rapJ NC_009725.1 279512 280633 D response regulator aspartate phosphatase; cd00189, TPR, tetratricopeptide repeat domain; RapJ 279512..280633 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463306 YP_001419939.1 CDS ycdF NC_009725.1 280749 281528 D glucose 1-dehydrogenase YcdF; hypothetical protein 280749..281528 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463307 YP_001419940.1 CDS ycdG NC_009725.1 281612 283291 D oligo-1,6-glucosidase YcdG; hypothetical protein 281612..283291 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463308 YP_001419941.1 CDS ycdH NC_009725.1 283477 284436 D ABC-transporter; cd01017; high-affinity zinc ABC transporter (Zn (II) -binding lipoprotein; proposed to be involved in surface adhesion; hypothetical protein 283477..284436 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463309 YP_001419942.1 CDS ycdI NC_009725.1 284491 285186 D ABC transporter (ATP-binding protein) YcdI; hypothetical protein 284491..285186 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462137 YP_001419943.1 CDS yceA NC_009725.1 285144 285983 D zinc ABC transporter, permease protein YceA; hypothetical protein 285144..285983 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462138 YP_001419944.1 CDS yceB NC_009725.1 286028 287023 R conserved hypothetical protein YceB; hypothetical protein complement(286028..287023) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462139 YP_001419945.1 CDS yceC NC_009725.1 287299 287895 D tellurium resistance protein YceC; hypothetical protein 287299..287895 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462140 YP_001419946.1 CDS yceD NC_009725.1 287919 288500 D tellurium resistance protein YceD; hypothetical protein 287919..288500 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462141 YP_001419947.1 CDS yceE NC_009725.1 288533 289111 D tellurium resistance protein YceE; hypothetical protein 288533..289111 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460585 YP_001419948.1 CDS yceF NC_009725.1 289150 289923 D tellurium resistance protein YceF; hypothetical protein 289150..289923 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460586 YP_001419949.1 CDS yceG NC_009725.1 289996 291618 D hypothetical protein YceG; hypothetical protein 289996..291618 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460587 YP_001419950.1 CDS yceH NC_009725.1 291625 292713 D toxic anion resistance protein YceH; hypothetical protein 291625..292713 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460588 YP_001419951.1 CDS yceI NC_009725.1 292829 294031 D hypothetical transport protein YceI; hypothetical protein 292829..294031 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460589 YP_001419952.1 CDS opuAA NC_009725.1 294414 295670 D glycine betaine ABC transporter (ATP-binding protein) OpuAA; OpuAA 294414..295670 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462295 YP_001419953.1 CDS opuAB NC_009725.1 295671 296519 D glycine betaine ABC transporter (permease) OpuAB; OpuAB 295671..296519 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462296 YP_001419954.1 CDS opuAC NC_009725.1 296519 297400 D glycine betaine ABC transporter (glycine betaine-binding protein) OpuAC; OpuAC 296519..297400 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462297 YP_001419955.1 CDS amhX NC_009725.1 297435 298556 R amidohydrolase AmhX; AmhX complement(297435..298556) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462298 YP_001419956.1 CDS ycgA NC_009725.1 298828 300123 D conserved hypothetical protein YcgA; hypothetical protein 298828..300123 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462299 YP_001419957.1 CDS ycgB NC_009725.1 300215 300703 D hypothetical protein YcgB; hypothetical protein 300215..300703 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462159 YP_001419958.1 CDS amyE NC_009725.1 300933 302912 D alpha-amylase AmyE; AmyE 300933..302912 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462160 YP_001419959.1 CDS ldh NC_009725.1 303182 304135 D Converts (S)-lactate and NAD(+) to pyruvate and NADH; L-lactate dehydrogenase 303182..304135 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462161 YP_001419960.1 CDS mdr NC_009725.1 304177 305709 R multidrug-efflux transporter Mdr; major facilitator superfamily transporter complement(304177..305709) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462162 YP_001419961.1 CDS ycgE NC_009725.1 305823 306284 D conserved hypothetical protein YcgE; hypothetical protein 305823..306284 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462163 YP_001419962.1 CDS ycgF NC_009725.1 306348 306977 D conserved hypothetical protein YcgF; hypothetical protein 306348..306977 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462474 YP_001419963.1 CDS yqcI NC_009725.1 307042 307803 D conserved hypothetical protein YqcI; hypothetical protein 307042..307803 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462475 YP_001419964.1 CDS ycgH NC_009725.1 307805 309133 R amino acid transporter YcgH; hypothetical protein complement(307805..309133) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462476 YP_001419965.1 CDS ycgI NC_009725.1 309258 309854 D conserved hypothetical protein YcgI; hypothetical protein 309258..309854 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462477 YP_001419966.1 CDS nadE NC_009725.1 309989 310807 D catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 309989..310807 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462478 YP_001419967.1 CDS lci NC_009725.1 310858 311142 R antimicrobial peptide Lci; hypothetical protein complement(310858..311142) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463067 YP_001419968.1 CDS tmrB NC_009725.1 311322 311918 R ATP-binding membrane protein TmrB; TmrB complement(311322..311918) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463068 YP_001419969.1 CDS RBAM_003390 NC_009725.1 311970 312758 R hypothetical protein complement(311970..312758) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463069 YP_001419970.1 CDS ycbE NC_009725.1 312977 314287 D sugar transport-related protein YcbE; hypothetical protein 312977..314287 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463070 YP_001419971.1 CDS aroK NC_009725.1 314413 314973 D catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase 314413..314973 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463071 YP_001419972.1 CDS cah NC_009725.1 315114 316070 D cephalosporin C deacetylase Cah; Cah 315114..316070 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461434 YP_001419973.1 CDS ycgL NC_009725.1 316136 316921 D conserved hypothetical protein YcgL; hypothetical protein 316136..316921 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461435 YP_001419974.1 CDS ycgM NC_009725.1 317043 318020 D proline dehydrohenase YcgM; hypothetical protein 317043..318020 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461436 YP_001419975.1 CDS ycgN NC_009725.1 318038 319585 D catalyzes the conversion of 1-proline-5-carboxylate dehydrogenase to L-glutamate; 1-pyrroline-5-carboxylate dehydrogenase 318038..319585 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461437 YP_001419976.1 CDS ycgO NC_009725.1 319824 321131 D sodium/proline symporter YcgO; hypothetical protein 319824..321131 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461438 YP_001419977.1 CDS ycgP NC_009725.1 321289 322524 D conserved hypothetical protein YcgP; hypothetical protein 321289..322524 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461715 YP_001419978.1 CDS ycgT NC_009725.1 322722 323732 D thioredoxin reductase like protein YcgT; hypothetical protein 322722..323732 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461716 YP_001419979.1 CDS nasF NC_009725.1 323788 325227 R uroporphyrin-III C-methyltransferase NasF; NasF complement(323788..325227) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461717 YP_001419980.1 CDS nasE NC_009725.1 325294 325614 R assimilatory nitrite reductase (subunit) NasE; NasE complement(325294..325614) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461718 YP_001419981.1 CDS nasD NC_009725.1 325635 328052 R assimilatory nitrite reductase (subunit) NasD; hypothetical protein complement(325635..328052) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461719 YP_001419982.1 CDS nasC NC_009725.1 328172 330304 R assimilatory nitrate reductase (catalytic subunit) NasC; NasC complement(328172..330304) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462963 YP_001419983.1 CDS nasB NC_009725.1 330297 332624 R assimilatory nitrate reductase (electron transfer subunit) NasB; NasB complement(330297..332624) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462964 YP_001419984.1 CDS nasA NC_009725.1 332805 334010 D nitrate transporter NasA; NasA 332805..334010 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462965 YP_001419985.1 CDS yciC NC_009725.1 334199 335401 D conserved hypothetical protein YciC; hypothetical protein 334199..335401 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462966 YP_001419986.1 CDS RBAM_003560 NC_009725.1 335466 336602 D glutathione-dependent formaldehyde dehydrogenase 335466..336602 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462967 YP_001419987.1 CDS yckC NC_009725.1 336617 337051 D conserved hypothetical protein YckC; hypothetical protein 336617..337051 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462637 YP_001419988.1 CDS yckD NC_009725.1 337124 337447 D hypothetical protein YckD; hypothetical protein 337124..337447 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462638 YP_001419989.1 CDS yckE NC_009725.1 337551 338987 D conserved hypothetical protein YckE; hypothetical protein 337551..338987 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462639 YP_001419990.1 CDS nin NC_009725.1 339028 339426 R inhibitor of the DNA degrading activity of NucA (competence) Nin; hypothetical protein complement(339028..339426) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462640 YP_001419991.1 CDS nucA NC_009725.1 339447 339884 R membrane-associated nuclease NucA; NucA complement(339447..339884) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462641 YP_001419992.1 CDS hxlB NC_009725.1 340243 340800 R 6-phospho-3-hexuloisomerase (PHI) HxlB; HxlB complement(340243..340800) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462763 YP_001419993.1 CDS hxlA NC_009725.1 340797 341432 R 3-hexulose-6-phosphate synthase (HPS) HxlA; HxlA complement(340797..341432) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462764 YP_001419994.1 CDS hxlR NC_009725.1 341664 342026 D transcriptional regulator of hxlAB expression HxlR; HxlR 341664..342026 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462765 YP_001419995.1 CDS srfAA NC_009725.1 342618 353372 D surfactin biosynthesis; surfactin synthetase A; SrfAA 342618..353372 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462766 YP_001419996.1 CDS srfAB NC_009725.1 353394 364154 D surfactin synthesis; surfactin synthetase B; SrfAB 353394..364154 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462767 YP_001419997.1 CDS comS NC_009725.1 356503 356667 D genetic competence; competence protein S; ComS 356503..356667 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460070 YP_001419998.1 CDS srfAC NC_009725.1 364189 368025 D surfactin synthesis; surfactin synthetase C; SrfAC 364189..368025 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460071 YP_001419999.1 CDS srfAD NC_009725.1 368045 368776 D surfactin synthesis; surfactin synthetase D; SrfAD 368045..368776 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460072 YP_001420000.1 CDS RBAM_003700 NC_009725.1 368898 370208 D COG0436; aspartate/tyrosine/aromatic acids and related molecules; hypothetical protein 368898..370208 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460073 YP_001420001.1 CDS RBAM_003710 NC_009725.1 370243 370638 R hypothetical protein complement(370243..370638) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460074 YP_001420002.1 CDS ycxC NC_009725.1 370778 371740 R pfam00892, integral membrane protein DUF6; hypothetical protein complement(370778..371740) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462886 YP_001420003.1 CDS ycxD NC_009725.1 371859 373169 D COG1167, AR08; transcriptional regulator containing a DNA binding HTH domain and an aminotransferase domain [MocR family]; hypothetical protein 371859..373169 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462887 YP_001420004.1 CDS sfp NC_009725.1 373164 373838 R phosphopantetheinylation of a serine residue in apo-ACP or PCP to convert them into active holo-form; phosphopantetheinyl transferase; Sfp complement(373164..373838) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462888 YP_001420005.1 CDS yczE NC_009725.1 373937 374584 R COG2364, predicted integral membrane protein; hypothetical protein complement(373937..374584) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462889 YP_001420006.1 CDS yckI NC_009725.1 374666 375409 R ABC-type transport protein, ATPase component; possibly involved in octopin transport; hypothetical protein complement(374666..375409) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462890 YP_001420007.1 CDS yckJ NC_009725.1 375422 376111 R ABC-type transport protein, permease component; possibly involved in octopin transport; hypothetical protein complement(375422..376111) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462820 YP_001420008.1 CDS yckK NC_009725.1 376113 376910 R probable amino-acid ABC transporter extracellular binding protein; possibly involved in opine synthesis; hypothetical protein complement(376113..376910) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462821 YP_001420009.1 CDS yclA NC_009725.1 377039 377911 R transcription regulator LysR family YclA; hypothetical protein complement(377039..377911) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462822 YP_001420010.1 CDS yclB NC_009725.1 377997 378617 D phenylacrylic acid decarboxylase YclB; aromatic acid decarboxylase 377997..378617 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462823 YP_001420011.1 CDS yclC NC_009725.1 378620 380041 D conserved hypothetical protein YclC; hypothetical protein 378620..380041 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462824 YP_001420012.1 CDS yclD1 NC_009725.1 380059 380286 D hypothetical protein YclD1; hypothetical protein 380059..380286 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460820 YP_001420013.1 CDS yclD2 NC_009725.1 380301 380747 D hypothetical protein YclD2; hypothetical protein 380301..380747 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460821 YP_001420014.1 CDS yclF NC_009725.1 380790 382268 R di-tripeptide ABC transporter, permease YclF; hypothetical protein complement(380790..382268) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460822 YP_001420015.1 CDS yclG NC_009725.1 382547 384292 D hypothetical protein YclG; hypothetical protein 382547..384292 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460823 YP_001420016.1 CDS yczF NC_009725.1 384384 384605 R hypothetical protein YczF; hypothetical protein complement(384384..384605) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460824 YP_001420017.1 CDS gerKA NC_009725.1 384728 386368 D spore germination protein GerKA; GerKA 384728..386368 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461945 YP_001420018.1 CDS gerKC NC_009725.1 386355 387581 D germination response protein GerKC; GerKC 386355..387581 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461946 YP_001420019.1 CDS gerKB NC_009725.1 387606 388724 D germination response protein GerKB; GerKB 387606..388724 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461947 YP_001420020.1 CDS yxeK NC_009725.1 388896 390218 D nitrilotriacetate monooxygenase like protein YxeK; hypothetical protein 388896..390218 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461948 YP_001420021.1 CDS yxeL NC_009725.1 390232 390723 D conserved hypothetical protein YxeL; hypothetical protein 390232..390723 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461949 YP_001420022.1 CDS yxeM NC_009725.1 390752 391543 D amino-acid ABC transporter binding protein YxeM; hypothetical protein 390752..391543 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460620 YP_001420023.1 CDS yxeN NC_009725.1 391566 392240 D amino acid ABC transporter (permease); possibly involved in opine transport; hypothetical protein 391566..392240 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460621 YP_001420024.1 CDS yxeO NC_009725.1 392254 393003 D probable amino acid ABC transporter (ATP-binding protein) YxeO; hypothetical protein 392254..393003 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460622 YP_001420025.1 CDS yxeP NC_009725.1 393021 394172 D conserved hypothetical protein YxeP; hypothetical protein 393021..394172 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460623 YP_001420026.1 CDS yxeQ NC_009725.1 394169 395515 D conserved hypothetical protein YxeQ; hypothetical protein 394169..395515 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460624 YP_001420027.1 CDS yclH NC_009725.1 395619 396302 R ABC transporter (ATPase component) YclH; hypothetical protein complement(395619..396302) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459911 YP_001420028.1 CDS yclI NC_009725.1 396317 397753 R ABC transporter (permease) YclI; hypothetical protein complement(396317..397753) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459912 YP_001420029.1 CDS yclJ NC_009725.1 397966 398649 D two component response regulator; COG0745, OmpR family consisting of a CheY-like receiver domain and a winged helix DNA-binding domain; hypothetical protein 397966..398649 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459913 YP_001420030.1 CDS yclK NC_009725.1 398639 400069 D signal transduction sensor histidin kinase; COG0642; part of a signal transduction two component system; hypothetical protein 398639..400069 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459914 YP_001420031.1 CDS rapC NC_009725.1 400222 401370 D response regulator aspartate phosphatase; cd00189, TPR, tetratricopeptide repeat domain; RapC 400222..401370 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459915 YP_001420032.1 CDS phrC NC_009725.1 401360 401473 D inhibitory peptide of RapC; RapC phosphatase regulator/competence and sporulation stimulating factor (CSF); PhrC 401360..401473 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461808 YP_001420033.1 CDS RBAM_004030 NC_009725.1 401622 401717 R hypothetical protein complement(401622..401717) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461809 YP_001420034.1 CDS yclM NC_009725.1 401812 403176 R catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; lysine and threonine sensitive; aspartate kinase complement(401812..403176) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461810 YP_001420035.1 CDS yclN NC_009725.1 403590 404543 D ferrichrome ABC transporter (permease) YclN; hypothetical protein 403590..404543 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461811 YP_001420036.1 CDS yclO NC_009725.1 404533 405480 D ferrichrome ABC transporter (permease) YclO; hypothetical protein 404533..405480 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461812 YP_001420037.1 CDS yclP NC_009725.1 405474 406232 D ferrichrome ABC transporter (ATP-binding protein) YclP; hypothetical protein 405474..406232 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460197 YP_001420038.1 CDS yclQ NC_009725.1 406254 407198 D ferrichrome ABC transporter (periplasmic binding protein); hypothetical protein 406254..407198 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460198 YP_001420039.1 CDS ycnB NC_009725.1 407240 408664 R multidrug resistance protein YcnB; hypothetical protein complement(407240..408664) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460199 YP_001420040.1 CDS ycnC NC_009725.1 408682 409557 R transcription regulator TetR/AcrR family like protein YcnC; hypothetical protein complement(408682..409557) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460200 YP_001420041.1 CDS ycnD NC_009725.1 409718 410464 R NADPH-flavin oxidoreductase YcnD; hypothetical protein complement(409718..410464) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460201 YP_001420042.1 CDS ycnE NC_009725.1 410481 410768 R conserved hypothetical protein YcnE; hypothetical protein complement(410481..410768) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463282 YP_001420043.1 CDS yczG NC_009725.1 410910 411224 D transcription regulator ArsR family like protein YczG; hypothetical protein 410910..411224 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463283 YP_001420044.1 CDS gabR NC_009725.1 411252 412661 R transcriptional regulator (GntR/MocR family) GabR; GabR complement(411252..412661) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463284 YP_001420045.1 CDS gabT NC_009725.1 412865 414076 D catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; 4-aminobutyrate aminotransferase 412865..414076 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463285 YP_001420046.1 CDS gabD NC_009725.1 414182 415570 D succinate-semialdehyde dehydrogenase GabD; GabD 414182..415570 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463286 YP_001420047.1 CDS glcU NC_009725.1 415725 416588 D glucose uptake protein GlcU; GlcU 415725..416588 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461675 YP_001420048.1 CDS gdh NC_009725.1 416609 417394 D Converts glucose to D-glucono-1,5 lactone; glucose-1-dehydrogenase 416609..417394 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461676 YP_001420049.1 CDS ycnI NC_009725.1 417440 418051 R conserved hypothetical protein YcnI; hypothetical protein complement(417440..418051) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461677 YP_001420050.1 CDS ycnJ NC_009725.1 418064 419692 R copper export protein YcnJ; hypothetical protein complement(418064..419692) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461678 YP_001420051.1 CDS ycnK NC_009725.1 419725 420297 R transcription regulator (DeoR family) YcnK; hypothetical protein complement(419725..420297) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461679 YP_001420052.1 CDS ycnL NC_009725.1 420477 420818 D hypothetical protein YcnL; hypothetical protein 420477..420818 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459965 YP_001420053.1 CDS mtlA NC_009725.1 421001 422434 D phosphotransferase system (PTS) mannitol-specific enzyme IIABC component MtlA; hypothetical protein 421001..422434 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459966 YP_001420054.1 CDS RBAM_004240 NC_009725.1 422460 422891 D PTS mannitol-specific enzyme IIA component 422460..422891 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459967 YP_001420055.1 CDS mtlD NC_009725.1 422893 424014 D mannitol-1-phosphate dehydrogenase MtlD; mannitol-1-phosphate 5-dehydrogenase 422893..424014 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459968 YP_001420056.1 CDS ycsD NC_009725.1 424083 424478 D conserved hypothetical protein YcsD; hypothetical protein 424083..424478 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459969 YP_001420057.1 CDS ycsE NC_009725.1 424809 425558 D conserved hypothetical protein YcsE; hypothetical protein 424809..425558 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460649 YP_001420058.1 CDS ycsF NC_009725.1 425764 426528 D lactam utilization protein YcsF; LamB/YcsF family protein 425764..426528 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460650 YP_001420059.1 CDS ycsG NC_009725.1 426551 427765 D conserved hypothetical protein YcsG; hypothetical protein 426551..427765 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460651 YP_001420060.1 CDS ycsI NC_009725.1 427770 428564 D conserved hypothetical protein YcsI; hypothetical protein 427770..428564 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460652 YP_001420061.1 CDS kipI NC_009725.1 428594 429325 D sporulation inhibitor KipI; KipI 428594..429325 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460653 YP_001420062.1 CDS kipA NC_009725.1 429322 430335 D kipI antagonist KipA; KipA 429322..430335 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460639 YP_001420063.1 CDS kipR NC_009725.1 430353 431102 D HTH-type transcriptional regulator (kip operon repressor) KipR; KipR 430353..431102 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460640 YP_001420064.1 CDS ycsK NC_009725.1 431167 431808 D conserved hypothetical protein YcsK; hypothetical protein 431167..431808 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460641 YP_001420065.1 CDS yczI NC_009725.1 431974 432219 D hypothetical protein YczI; hypothetical protein 431974..432219 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460642 YP_001420066.1 CDS yczJ NC_009725.1 432190 432510 R conserved hypothetical protein YczJ; hypothetical protein complement(432190..432510) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460643 YP_001420067.1 CDS pbpC NC_009725.1 432667 434670 D penicillin-binding protein III PbpC; PbpC 432667..434670 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460515 YP_001420068.1 CDS ycsN NC_009725.1 434784 435686 D aryl-alcohol dehydrogenase YcsN; hypothetical protein 434784..435686 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460516 YP_001420069.1 CDS mtlR NC_009725.1 435986 438070 D transcriptional antiterminator MtlR; hypothetical protein 435986..438070 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460517 YP_001420070.1 CDS ydaB NC_009725.1 438292 439806 D acid-CoA ligase YdaB; hypothetical protein 438292..439806 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460518 YP_001420071.1 CDS ydaD NC_009725.1 439935 440825 D alcohol dehydrogenase YdaD; short chain dehydrogenase 439935..440825 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460519 YP_001420072.1 CDS ydaE NC_009725.1 440838 441341 D conserved hypothetical protein YdaE; hypothetical protein 440838..441341 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461625 YP_001420073.1 CDS ydaF NC_009725.1 441429 442052 D acetyltransferase YdaF; hypothetical protein 441429..442052 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461626 YP_001420074.1 CDS ydaG NC_009725.1 442059 442481 D general stress protein YdaG; hypothetical protein 442059..442481 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461627 YP_001420075.1 CDS ydaH NC_009725.1 442979 443788 D hypothetical protein YdaH; hypothetical protein 442979..443788 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461628 YP_001420076.1 CDS ydzA NC_009725.1 443826 444116 R conserved hypothetical protein YdzA; hypothetical protein complement(443826..444116) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461629 YP_001420077.1 CDS lrpC NC_009725.1 444293 444727 D HTH-type transcriptional regulator LrpC; LrpC 444293..444727 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459747 YP_001420078.1 CDS topB NC_009725.1 444791 446977 D decatenates replicating daughter chromosomes; DNA topoisomerase III 444791..446977 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459748 YP_001420079.1 CDS ydaJ NC_009725.1 447211 448296 D hypothetical protein YdaJ; hypothetical protein 447211..448296 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459749 YP_001420080.1 CDS ydaK NC_009725.1 448277 449125 D conserved hypothetical protein YdaK; hypothetical protein 448277..449125 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459750 YP_001420081.1 CDS ydaL NC_009725.1 449115 450842 D hypothetical protein YdaL; hypothetical protein 449115..450842 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459751 YP_001420082.1 CDS ydaM NC_009725.1 450835 452097 D cellulose synthase YdaM; hypothetical protein 450835..452097 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460851 YP_001420083.1 CDS ydaN NC_009725.1 452103 454208 D hypothetical protein YdaN; hypothetical protein 452103..454208 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460852 YP_001420084.1 CDS ydaO NC_009725.1 454643 456463 D conserved hypothetical protein YdaO; hypothetical protein 454643..456463 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460853 YP_001420085.1 CDS mutT NC_009725.1 456517 456963 D mutator protein MutT; hypothetical protein 456517..456963 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460854 YP_001420086.1 CDS ydaP NC_009725.1 457021 458742 D catalyzes the formation of acetyl phosphate from pyruvate; pyruvate oxidase 457021..458742 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460855 YP_001420087.1 CDS RBAM_004570 NC_009725.1 458872 459294 R hypothetical protein complement(458872..459294) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462010 YP_001420088.1 CDS ypzD NC_009725.1 459731 459943 R hypothetical protein YpzD; hypothetical protein complement(459731..459943) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462011 YP_001420089.1 CDS RBAM_004590 NC_009725.1 460247 460618 D hypothetical protein 460247..460618 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462012 YP_001420090.1 CDS rapH NC_009725.1 460927 462060 D response regulator aspartate phosphatase RapH; RapH 460927..462060 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462013 YP_001420091.1 CDS RBAM_004610 NC_009725.1 462188 462352 R hypothetical protein complement(462188..462352) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462014 YP_001420092.1 CDS RBAM_004620 NC_009725.1 462542 462772 R hypothetical protein complement(462542..462772) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459699 YP_001420093.1 CDS RBAM_004630 NC_009725.1 463153 463710 R hypothetical protein complement(463153..463710) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459700 YP_001420094.1 CDS RBAM_004640 NC_009725.1 463807 464385 R hypothetical protein complement(463807..464385) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459701 YP_001420095.1 CDS RBAM_004650 NC_009725.1 464611 464877 R hypothetical protein complement(464611..464877) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459702 YP_001420096.1 CDS mntH NC_009725.1 464982 466256 R manganese transport protein MntH complement(464982..466256) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459703 YP_001420097.1 CDS RBAM_004670 NC_009725.1 466328 466552 R hypothetical protein complement(466328..466552) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460059 YP_001420098.1 CDS RBAM_004680 NC_009725.1 466915 467268 D hypothetical protein 466915..467268 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460060 YP_001420099.1 CDS ydaT NC_009725.1 467318 467542 R hypothetical protein conserved protein YdaT; hypothetical protein complement(467318..467542) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460061 YP_001420100.1 CDS yvaD NC_009725.1 467600 468007 R hypothetical protein YvaD; hypothetical protein complement(467600..468007) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460062 YP_001420101.1 CDS yvaE NC_009725.1 468004 468369 R multidrug-efflux transporter YvaE; hypothetical protein complement(468004..468369) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460063 YP_001420102.1 CDS ydbA NC_009725.1 468536 469342 D ABC transporter (binding protein) like protein YdbA; hypothetical protein 468536..469342 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463223 YP_001420103.1 CDS gsiB NC_009725.1 469443 469814 D general stress protein GsiB; GsiB 469443..469814 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463224 YP_001420104.1 CDS ydbB NC_009725.1 469949 470308 D conserved hypothetical protein YdbB; hypothetical protein 469949..470308 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463225 YP_001420105.1 CDS ydbC NC_009725.1 470283 470642 D hypothetical protein YdbC; hypothetical protein 470283..470642 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463226 YP_001420106.1 CDS ydbD NC_009725.1 470679 471500 R manganese-containing catalase YdbD; hypothetical protein complement(470679..471500) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463227 YP_001420107.1 CDS dctB NC_009725.1 471586 472638 R C4-dicarboxylate binding protein DctB; DctB complement(471586..472638) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462596 YP_001420108.1 CDS dctS NC_009725.1 472719 474341 D C4-dicarboxylate sensor kinase; COG3290, signal transduction mechanism; DctS 472719..474341 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462597 YP_001420109.1 CDS dctR NC_009725.1 474316 474987 D C4-dicarboxylate response regulator; COG4565, signal transduction mechanism; DctR 474316..474987 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462598 YP_001420110.1 CDS dctP NC_009725.1 475096 476352 D involved in the transport of C4-dicarboxylates across the membrane; C4-dicarboxylate transporter DctA 475096..476352 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462599 YP_001420111.1 CDS ydbI NC_009725.1 476538 477587 D conserved hypothetical protein YdbI; hypothetical protein 476538..477587 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462600 YP_001420112.1 CDS ydbJ NC_009725.1 477689 478615 D ABC transporter (ATP-binding protein) YdbJ; hypothetical protein 477689..478615 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462815 YP_001420113.1 CDS ydbK NC_009725.1 478608 479375 D transcriptional control of biofilm formation; hypothetical protein 478608..479375 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462816 YP_001420114.1 CDS ydbL NC_009725.1 479470 479805 D hypothetical protein YdbL; hypothetical protein 479470..479805 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462817 YP_001420115.1 CDS ydbM NC_009725.1 479960 481066 D butyryl-CoA dehydrogenase YdbM; hypothetical protein 479960..481066 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462818 YP_001420116.1 CDS ydbN NC_009725.1 481093 481239 R hypothetical protein YdbN; hypothetical protein complement(481093..481239) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462819 YP_001420117.1 CDS ydbO1 NC_009725.1 481619 482005 D hypothetical protein YdbO1; hypothetical protein 481619..482005 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460375 YP_001420118.1 CDS ydbO2 NC_009725.1 482005 482511 D hypothetical protein YdbO2; hypothetical protein 482005..482511 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460376 YP_001420119.1 CDS ydbP NC_009725.1 482508 482825 R thiredoxin protein YdbP; hypothetical protein complement(482508..482825) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460377 YP_001420120.1 CDS ddl NC_009725.1 483000 484064 D D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanyl-alanine synthetase A 483000..484064 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460378 YP_001420121.1 CDS murF NC_009725.1 484141 485511 D UDP-N-acetylmuramoylalanyl-D-glutamyl-2 6-diaminopimelate-D-alanyl-D-alanine ligase MurF; hypothetical protein 484141..485511 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460379 YP_001420122.1 CDS ydbR NC_009725.1 485791 487326 D ATP-dependent RNA helicase YdbR; hypothetical protein 485791..487326 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461243 YP_001420123.1 CDS ydbS NC_009725.1 487440 487922 D conserved hypothetical protein YdbS; hypothetical protein 487440..487922 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461244 YP_001420124.1 CDS ydbT NC_009725.1 487912 489378 D conserved hypothetical protein YdbT; hypothetical protein 487912..489378 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461245 YP_001420125.1 CDS ydcA NC_009725.1 489375 489974 R hypothetical protein YdcA; hypothetical protein complement(489375..489974) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461246 YP_001420126.1 CDS acpS NC_009725.1 490067 490432 D Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 490067..490432 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461247 YP_001420127.1 CDS ydcC NC_009725.1 490597 491604 D conserved hypothetical protein YdcC; hypothetical protein 490597..491604 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462917 YP_001420128.1 CDS alr NC_009725.1 491721 492890 D D-alanine racemase Alr; hypothetical protein 491721..492890 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462918 YP_001420129.1 CDS ydcD NC_009725.1 493010 493291 D hypothetical protein YdcD; hypothetical protein 493010..493291 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462919 YP_001420130.1 CDS ydcE NC_009725.1 493297 493647 D conserved hypothetical protein YdcE; hypothetical protein 493297..493647 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462920 YP_001420131.1 CDS rsbR NC_009725.1 493765 494586 D positive regulator of sigma-B activity RsbR; hypothetical protein 493765..494586 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462921 YP_001420132.1 CDS rsbS NC_009725.1 494591 494956 D negative regulator of sigma-B activity (antagonist of RsbT) RsbS; RsbS 494591..494956 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461469 YP_001420133.1 CDS rsbT NC_009725.1 494959 495360 D serine/threonine-protein kinase rsbT (Switch protein/serine kinase) (Anti-sigma-B factor RsbT; RsbT 494959..495360 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461470 YP_001420134.1 CDS rsbU NC_009725.1 495372 496379 D sigma factor sigB regulation protein (phosphoserine phosphatase) RsbU; hypothetical protein 495372..496379 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461471 YP_001420135.1 CDS rsbV NC_009725.1 496443 496772 D anti-anti-sigma factor (antagonist of RsbW) RsbV; RsbV 496443..496772 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461472 YP_001420136.1 CDS rsbW NC_009725.1 496769 497251 D binds to sigma-B preventing the formation of an RNA polymerase holoenzyme; serine-protein kinase RsbW 496769..497251 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461473 YP_001420137.1 CDS sigB NC_009725.1 497217 498005 D sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma B is not essential for sporulation; rather it is required for maximal expression of ctc and csbA which are transcribed in the early stationary phase under conditions inimical to sporulation; induced by heat shock, salt stress, oxidative stress, glucose limitation, oxygen limitation and entry into stationary phase; RNA polymerase sigma factor SigB 497217..498005 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462566 YP_001420138.1 CDS rsbX NC_009725.1 498005 498607 D sigma-B activity indirect negative regulator RsbX; RsbX 498005..498607 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462567 YP_001420139.1 CDS ydcI NC_009725.1 498680 500839 D conserved hypothetical protein YdcI; hypothetical protein 498680..500839 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462568 YP_001420140.1 CDS RBAM_005100 NC_009725.1 500849 500962 R hypothetical protein complement(500849..500962) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462569 YP_001420141.1 CDS ydcK NC_009725.1 501062 501511 D conserved hypothetical protein YdcK; hypothetical protein 501062..501511 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462570 YP_001420142.1 CDS yrkL NC_009725.1 502817 503341 D conserved hypothetical protein YrkL; hypothetical protein 502817..503341 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460679 YP_001420143.1 CDS RBAM_005200 NC_009725.1 503529 503942 R hypothetical protein complement(503529..503942) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460868 YP_001420144.1 CDS yddR NC_009725.1 503986 504756 R conserved hypothetical protein YddR; hypothetical protein complement(503986..504756) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460869 YP_001420145.1 CDS lrpA NC_009725.1 504930 505340 D transcriptional regulator (Lrp/AsnC family) LrpA; LrpA 504930..505340 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460870 YP_001420146.1 CDS RBAM_005230 NC_009725.1 505957 506769 D hypothetical protein 505957..506769 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460871 YP_001420147.1 CDS RBAM_005240 NC_009725.1 506824 506958 D hypothetical protein 506824..506958 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460872 YP_001420148.1 CDS RBAM_005250 NC_009725.1 507659 507811 D hypothetical protein 507659..507811 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459651 YP_001420149.1 CDS RBAM_005260 NC_009725.1 507980 509383 D permease 507980..509383 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459652 YP_001420150.1 CDS RBAM_005270 NC_009725.1 509723 510037 D transcriptional regulato 509723..510037 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459653 YP_001420151.1 CDS yddJ NC_009725.1 510198 510680 D hypothetical protein YddJ; hypothetical protein 510198..510680 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459654 YP_001420152.1 CDS ydeM NC_009725.1 510677 511102 D conserved hypothetical protein YdeM; hypothetical protein 510677..511102 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459655 YP_001420153.1 CDS RBAM_005300 NC_009725.1 511366 511707 R hypothetical protein complement(511366..511707) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463287 YP_001420154.1 CDS ywnA1 NC_009725.1 512050 512493 R conserved hypothetical protein yYwnA1; hypothetical protein complement(512050..512493) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463288 YP_001420155.1 CDS ywnB NC_009725.1 512691 513329 D conserved hypothetical protein YwnB; hypothetical protein 512691..513329 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463289 YP_001420156.1 CDS RBAM_005330 NC_009725.1 514054 514629 D hypothetical protein 514054..514629 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463290 YP_001420157.1 CDS RBAM_005340 NC_009725.1 514687 515436 D oxidoreductase 514687..515436 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463291 YP_001420158.1 CDS RBAM_005350 NC_009725.1 515761 516774 D hypothetical protein 515761..516774 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462078 YP_001420159.1 CDS RBAM_005360 NC_009725.1 517642 518616 R hypothetical protein complement(517642..518616) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462079 YP_001420160.1 CDS RBAM_005370 NC_009725.1 518794 519129 D transcriptional regulator 518794..519129 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462080 YP_001420161.1 CDS RBAM_005380 NC_009725.1 519671 520699 R putitative fatty acid desaturase complement(519671..520699) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462081 YP_001420162.1 CDS RBAM_005390 NC_009725.1 521046 521201 D hypothetical protein 521046..521201 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462082 YP_001420163.1 CDS cspC NC_009725.1 521421 521624 D cold shock protein; involved in elicitation of plant basal defence; hypothetical protein 521421..521624 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460885 YP_001420164.1 CDS ydeB NC_009725.1 522288 522749 R conserved hypothetical protein YdeB; hypothetical protein complement(522288..522749) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460886 YP_001420165.1 CDS yrkD NC_009725.1 523350 523610 D conserved hypothetical protein YrkD; hypothetical protein 523350..523610 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460887 YP_001420166.1 CDS yrkE NC_009725.1 523771 524253 D conserved hypothetical protein YrkE; hypothetical protein 523771..524253 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460888 YP_001420167.1 CDS RBAM_005440 NC_009725.1 524287 524655 D rhodanese-like domain-containing protein 524287..524655 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460889 YP_001420168.1 CDS yrkF NC_009725.1 524715 525281 D conserved hypothetical protein YrkF; hypothetical protein 524715..525281 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462752 YP_001420169.1 CDS yrkH NC_009725.1 525524 526411 D conserved hypothetical protein YrkH; hypothetical protein 525524..526411 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462753 YP_001420170.1 CDS yrkI NC_009725.1 526445 526672 D conserved hypothetical protein YrkI; hypothetical protein 526445..526672 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462754 YP_001420171.1 CDS yrkJ NC_009725.1 526732 527508 D conserved hypothetical protein YrkJ; hypothetical protein 526732..527508 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462755 YP_001420172.1 CDS racX NC_009725.1 528210 528890 D aspartate racemase RacX; hypothetical protein 528210..528890 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462756 YP_001420173.1 CDS RBAM_005500 NC_009725.1 528998 529567 R hypothetical protein complement(528998..529567) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460981 YP_001420174.1 CDS RBAM_005510 NC_009725.1 529554 529871 R transcriptional regulator complement(529554..529871) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460982 YP_001420175.1 CDS ybfA NC_009725.1 530225 531130 D conserved hypothetical protein YbfA; hypothetical protein 530225..531130 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460983 YP_001420176.1 CDS ybfB NC_009725.1 531147 532439 D hypothetical protein YbfB; hypothetical protein 531147..532439 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460984 YP_001420177.1 CDS yvdO NC_009725.1 532534 533499 R conserved hypothetical protein YvdO; hypothetical protein complement(532534..533499) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460985 YP_001420178.1 CDS RBAM_005550 NC_009725.1 533700 534176 D hypothetical protein 533700..534176 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460274 YP_001420179.1 CDS RBAM_005560 NC_009725.1 534212 534574 D hypothetical protein 534212..534574 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460275 YP_001420180.1 CDS RBAM_005570 NC_009725.1 535179 535499 D hypothetical protein 535179..535499 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460276 YP_001420181.1 CDS yvdP NC_009725.1 535899 537245 D conserved hypothetical protein YvdP; hypothetical protein 535899..537245 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460277 YP_001420182.1 CDS RBAM_005590 NC_009725.1 537319 537741 R hypothetical protein complement(537319..537741) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460278 YP_001420183.1 CDS czcD NC_009725.1 537934 538875 D cation-efflux system membrane protein CzcD; CzcD 537934..538875 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461288 YP_001420184.1 CDS trkA NC_009725.1 538939 539976 D potassium uptake protein TrkA; hypothetical protein 538939..539976 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461289 YP_001420185.1 CDS yrkC NC_009725.1 540979 541512 D conserved hypothetical protein YrkC; hypothetical protein 540979..541512 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461290 YP_001420186.1 CDS ykkA NC_009725.1 541785 542267 R hypothetical protein YkkA; hypothetical protein complement(541785..542267) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461291 YP_001420187.1 CDS RBAM_005640 NC_009725.1 542505 543299 D hypothetical protein 542505..543299 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461292 YP_001420188.1 CDS RBAM_005650 NC_009725.1 543330 543647 D hypothetical protein 543330..543647 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463019 YP_001420189.1 CDS RBAM_005660 NC_009725.1 543799 544848 D chloramphenicol/florfenicol resistance protein 543799..544848 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463020 YP_001420190.1 CDS ydeH NC_009725.1 544957 545337 D hypothetical protein YdeH; hypothetical protein 544957..545337 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463021 YP_001420191.1 CDS RBAM_005680 NC_009725.1 545606 546070 D hypothetical protein 545606..546070 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463022 YP_001420192.1 CDS RBAM_005690 NC_009725.1 546067 547077 D hypothetical protein 546067..547077 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463023 YP_001420193.1 CDS RBAM_005700 NC_009725.1 547074 547832 D hypothetical protein 547074..547832 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461188 YP_001420194.1 CDS RBAM_005710 NC_009725.1 547847 548665 D phosphomethylpyrimidine kinase 547847..548665 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461189 YP_001420195.1 CDS RBAM_005720 NC_009725.1 548677 549912 D hypothetical protein 548677..549912 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461190 YP_001420196.1 CDS RBAM_005730 NC_009725.1 550101 551063 D hypothetical protein 550101..551063 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461191 YP_001420197.1 CDS adhA NC_009725.1 551123 552172 R NADP-dependent alcohol dehydrogenase AdhA; hypothetical protein complement(551123..552172) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461192 YP_001420198.1 CDS yraB NC_009725.1 552332 552736 D transcriptional regulator YraB; hypothetical protein 552332..552736 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459781 YP_001420199.1 CDS RBAM_005760 NC_009725.1 552960 554249 D Na+/H+ antiporter 552960..554249 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459782 YP_001420200.1 CDS RBAM_005770 NC_009725.1 554280 555662 R GntR family transcriptional regulator complement(554280..555662) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459783 YP_001420201.1 CDS RBAM_005780 NC_009725.1 555780 556400 D transcriptional repressor of sporulation and degradative enzymes production 555780..556400 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459784 YP_001420202.1 CDS RBAM_005790 NC_009725.1 557018 557626 D hypothetical protein 557018..557626 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459785 YP_001420203.1 CDS RBAM_005800 NC_009725.1 557598 558284 D COG0745, OmpR like response regulator consisting of a CheY-like receiver domain and a winged helix-DNA-binding domain [signal transduction]; two-component response regulator 557598..558284 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461481 YP_001420204.1 CDS RBAM_005810 NC_009725.1 558281 559354 D COG0642, signal transduction histidine kinase; two-component sensor histidine kinase 558281..559354 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461482 YP_001420205.1 CDS RBAM_005820 NC_009725.1 559481 560110 D hypothetical protein 559481..560110 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461483 YP_001420206.1 CDS ydeR NC_009725.1 560202 561392 R hypothetical protein YdeR; hypothetical protein complement(560202..561392) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461484 YP_001420207.1 CDS ydeS NC_009725.1 561642 562229 D conserved hypothetical protein YdeS; hypothetical protein 561642..562229 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461485 YP_001420208.1 CDS ydeK NC_009725.1 562307 563191 R conserved hypothetical protein YdeK; hypothetical protein complement(562307..563191) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459704 YP_001420209.1 CDS ydeL NC_009725.1 563318 564706 D transcriptional regulator (GntR family)YdeL; hypothetical protein 563318..564706 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459705 YP_001420210.1 CDS yraD NC_009725.1 564772 565071 R spore coat protein YraD; hypothetical protein complement(564772..565071) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459706 YP_001420211.1 CDS yraE NC_009725.1 565087 565284 R spore coat protein YraE; hypothetical protein complement(565087..565284) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459707 YP_001420212.1 CDS adhB NC_009725.1 565303 566439 R alcohol dehydrogenase AdhB; hypothetical protein complement(565303..566439) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459708 YP_001420213.1 CDS yraF NC_009725.1 566458 566826 R spore coat protein YraF; hypothetical protein complement(566458..566826) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461248 YP_001420214.1 CDS yraG NC_009725.1 566844 567089 R spore coat protein YraG; hypothetical protein complement(566844..567089) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461249 YP_001420215.1 CDS ydfH NC_009725.1 567588 568805 D sensor histidine kinase; COG4585, signal transduction; hypothetical protein 567588..568805 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461250 YP_001420216.1 CDS ydfI NC_009725.1 568798 569433 D two-component response regulator; COG2197, CitB like response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; hypothetical protein 568798..569433 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461251 YP_001420217.1 CDS ydfJ NC_009725.1 569532 571685 D antibiotic transport-associated protein YdfJ; hypothetical protein 569532..571685 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461252 YP_001420218.1 CDS RBAM_005950 NC_009725.1 571719 572441 R glutamine amidotransferase complement(571719..572441) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459764 YP_001420219.1 CDS expZ NC_009725.1 572567 574195 R ABC transporter, ATPase component ExpZ; ExpZ complement(572567..574195) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459765 YP_001420220.1 CDS ynaD NC_009725.1 574473 575000 R conserved hypothetical protein YnaD; hypothetical protein complement(574473..575000) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459766 YP_001420221.1 CDS RBAM_005980 NC_009725.1 575116 575973 R hypothetical protein complement(575116..575973) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459767 YP_001420222.1 CDS gldA NC_009725.1 576286 577389 D forms dimers and octamers; involved in conversion of glycerol to dihydroxy-acetone; glycerol dehydrogenase 576286..577389 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459768 YP_001420223.1 CDS ydgK NC_009725.1 577535 578746 D bicyclomycin resistance protein YdgK; hypothetical protein 577535..578746 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460873 YP_001420224.1 CDS RBAM_006010 NC_009725.1 578775 580010 R beta-ketoacyl-acyl carrier protein synthase II complement(578775..580010) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460874 YP_001420225.1 CDS RBAM_006020 NC_009725.1 580119 580958 D hypothetical protein 580119..580958 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460875 YP_001420226.1 CDS ydhB NC_009725.1 580998 581756 R membrane spanning protein YdhB; hypothetical protein complement(580998..581756) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460876 YP_001420227.1 CDS bltD NC_009725.1 581899 582357 R diamine N-acetyltransferase BltD; BltD complement(581899..582357) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460877 YP_001420228.1 CDS bltR NC_009725.1 582489 583310 D transcriptional regulator of bltD operon BltR; BltR 582489..583310 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461510 YP_001420229.1 CDS ydzE NC_009725.1 583526 584398 D hypothetical protein YdzE; hypothetical protein 583526..584398 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461511 YP_001420230.1 CDS yjhB NC_009725.1 584574 585191 D mutator MutT protein homolog YjhB; hypothetical protein 584574..585191 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461512 YP_001420231.1 CDS RBAM_006080 NC_009725.1 585227 586009 D hypothetical protein 585227..586009 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461513 YP_001420232.1 CDS ycsA NC_009725.1 586058 586906 R hypothetical protein YcsA; hypothetical protein complement(586058..586906) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461514 YP_001420233.1 CDS ydhC NC_009725.1 587228 587914 D transcriptional regulator YdhC; hypothetical protein 587228..587914 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463094 YP_001420234.1 CDS ydhE NC_009725.1 588056 589249 D macrolide glycosyltransferase YdhE; hypothetical protein 588056..589249 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463095 YP_001420235.1 CDS yjiA NC_009725.1 589307 589561 R hypothetical protein YjiA; hypothetical protein complement(589307..589561) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463096 YP_001420236.1 CDS ydcS NC_009725.1 589793 590062 D hypothetical protein YdcS; hypothetical protein 589793..590062 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463097 YP_001420237.1 CDS pbpE NC_009725.1 590199 591557 D penicillin-binding protein PbpE; PbpE 590199..591557 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463098 YP_001420238.1 CDS ydhK NC_009725.1 591947 592633 D hypothetical protein YdhK; hypothetical protein 591947..592633 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462311 YP_001420239.1 CDS ydhL NC_009725.1 592598 593758 R conserved hypothetical protein YdhL; hypothetical protein complement(592598..593758) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462312 YP_001420240.1 CDS ydhQ NC_009725.1 594089 594805 D conserved hypothetical protein YdhQ; hypothetical protein 594089..594805 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462313 YP_001420241.1 CDS RBAM_006180 NC_009725.1 594927 595613 D GntR family transcriptional regulator 594927..595613 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462314 YP_001420242.1 CDS yycB NC_009725.1 595603 596817 D conserved hypothetical protein YycB; hypothetical protein 595603..596817 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462315 YP_001420243.1 CDS yvdR NC_009725.1 596877 597191 R conserved hypothetical protein YvdR; hypothetical protein complement(596877..597191) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461213 YP_001420244.1 CDS yvdS NC_009725.1 597191 597520 R conserved hypothetical protein YvdS; hypothetical protein complement(597191..597520) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461214 YP_001420245.1 CDS yvdT NC_009725.1 597593 598174 R transcription regulator (TetR/AcrR family) YvdT; hypothetical protein complement(597593..598174) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461215 YP_001420246.1 CDS yveA NC_009725.1 598290 599852 R aspartate-proton symporter YveA; hypothetical protein complement(598290..599852) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461216 YP_001420247.1 CDS ydhU NC_009725.1 600089 600943 R manganese cataYdhU; hypothetical protein complement(600089..600943) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461217 YP_001420248.1 CDS yndB NC_009725.1 601055 601522 R conserved hypothetical protein YndB; hypothetical protein complement(601055..601522) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461486 YP_001420249.1 CDS yhfP NC_009725.1 601650 602651 D conserved hypothetical protein YhfP; hypothetical protein 601650..602651 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461487 YP_001420250.1 CDS ydjK NC_009725.1 603078 604496 D sugar transporter YdjK; hypothetical protein 603078..604496 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461488 YP_001420251.1 CDS thiL NC_009725.1 610242 611219 D catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP; thiamine monophosphate kinase 610242..611219 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462155 YP_001420252.1 CDS ydiB NC_009725.1 611235 611711 D conserved hypothetical protein YdiB; hypothetical protein 611235..611711 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462156 YP_001420253.1 CDS ydiC NC_009725.1 611692 612381 D glycoprotein endopeptidase homolog YdiC; hypothetical protein 611692..612381 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462157 YP_001420254.1 CDS ydiD NC_009725.1 612392 612847 D ribosomal-protein-alanine N-acetyltransferase YdiD; hypothetical protein 612392..612847 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462158 YP_001420255.1 CDS gcp NC_009725.1 612840 613880 D in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease 612840..613880 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460597 YP_001420256.1 CDS ydiF NC_009725.1 614104 616032 R ABC transporter ATP-binding YdiF; hypothetical protein complement(614104..616032) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460598 YP_001420257.1 CDS moaC NC_009725.1 616172 616684 D MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC 616172..616684 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460599 YP_001420258.1 CDS rex NC_009725.1 616681 617328 D modulates transcription in response to the NADH/NAD(+) redox state; redox-sensing transcriptional repressor Rex 616681..617328 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460600 YP_001420259.1 CDS tatAy NC_009725.1 617347 617517 D sec-independent protein translocase protein TatAy; TatAy 617347..617517 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460601 YP_001420260.1 CDS tatCy NC_009725.1 617533 618282 D sec-independent protein translocase protein TatCy; TatCy 617533..618282 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460837 YP_001420261.1 CDS ydiK NC_009725.1 618320 618511 R hypothetical lipoprotein YdiK; hypothetical protein complement(618320..618511) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460838 YP_001420262.1 CDS ydiL NC_009725.1 618508 619242 R conserved hypothetical protein YdiL; hypothetical protein complement(618508..619242) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460839 YP_001420263.1 CDS groES NC_009725.1 619479 619763 D 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 619479..619763 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460840 YP_001420264.1 CDS groEL NC_009725.1 619805 621439 D 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; molecular chaperone GroEL 619805..621439 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460841 YP_001420265.1 CDS ykuG NC_009725.1 621764 624049 D conserved hypothetical protein YkuG; hypothetical protein 621764..624049 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462934 YP_001420266.1 CDS ykuH NC_009725.1 624134 624706 D hypothetical protein YkuH; hypothetical protein 624134..624706 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462935 YP_001420267.1 CDS RBAM_006510 NC_009725.1 625066 625215 D hypothetical protein 625066..625215 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462936 YP_001420268.1 CDS RBAM_006520 NC_009725.1 625422 625811 D hypothetical protein 625422..625811 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462937 YP_001420269.1 CDS gutR NC_009725.1 626009 628486 R transcriptional regulator GutR; GutR complement(626009..628486) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462938 YP_001420270.1 CDS gutB NC_009725.1 628687 629748 D sorbitol dehydrogenase (L-iditol 2-dehydrogenase) GutB; GutB 628687..629748 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462203 YP_001420271.1 CDS gutA NC_009725.1 629822 631198 D probable glucitol transport protein GutA; GutA 629822..631198 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462204 YP_001420272.1 CDS ydjE NC_009725.1 631300 632262 D fructokinase homolog YdjE; hypothetical protein 631300..632262 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462205 YP_001420273.1 CDS yjdJ NC_009725.1 632496 632813 D hypothetical protein YjdJ; hypothetical protein 632496..632813 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462206 YP_001420274.1 CDS pspA NC_009725.1 632927 633613 D phage shock protein A homolog like protein PspA; hypothetical protein 632927..633613 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462207 YP_001420275.1 CDS ydjG NC_009725.1 633664 634689 D hypothetical protein YdjG; hypothetical protein 633664..634689 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463111 YP_001420276.1 CDS ydjH NC_009725.1 634689 635450 D conserved hypothetical protein YdjH; hypothetical protein 634689..635450 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463112 YP_001420277.1 CDS ydjI NC_009725.1 635477 636481 D conserved hypothetical protein YdjI; hypothetical protein 635477..636481 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463113 YP_001420278.1 CDS yrhL NC_009725.1 636523 638454 R acetyltransferase YrhL; hypothetical protein complement(636523..638454) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463114 YP_001420279.1 CDS yrhM NC_009725.1 638726 639586 R anti-sigV factor YrhM; hypothetical protein complement(638726..639586) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463115 YP_001420280.1 CDS sigV NC_009725.1 639586 640083 R RNA polymerase ECF(extracytoplasmic function)-type sigma factor SigV; SigV complement(639586..640083) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461999 YP_001420281.1 CDS ydjL NC_009725.1 640272 641312 R dehydrogenase YdjL; hypothetical protein complement(640272..641312) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462000 YP_001420282.1 CDS ydjM NC_009725.1 641676 642044 D hypothetical protein YdjM; hypothetical protein 641676..642044 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462001 YP_001420283.1 CDS ydjN NC_009725.1 642110 643156 D hypothetical protein YdjN; hypothetical protein 642110..643156 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462002 YP_001420284.1 CDS RBAM_006680 NC_009725.1 643187 643345 R hypothetical protein complement(643187..643345) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462003 YP_001420285.1 CDS ydjO NC_009725.1 643444 643653 R hypothetical protein YdjO; hypothetical protein complement(643444..643653) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462649 YP_001420286.1 CDS cotA NC_009725.1 643858 645396 R spore coat protein (outer) CotA; CotA complement(643858..645396) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462650 YP_001420287.1 CDS gabP NC_009725.1 645504 646889 R gamma-aminobutyrate (GABA) permease GabP; GabP complement(645504..646889) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462651 YP_001420288.1 CDS yeaB NC_009725.1 647276 648148 D transport protein YeaB; hypothetical protein 647276..648148 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462652 YP_001420289.1 CDS yeaC NC_009725.1 648287 649249 D conserved hypothetical protein YeaC; hypothetical protein 648287..649249 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462653 YP_001420290.1 CDS yeaD NC_009725.1 649249 650433 D conserved hypothetical protein YeaD; hypothetical protein 649249..650433 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461111 YP_001420291.1 CDS yebA NC_009725.1 650452 652659 D conserved hypothetical protein YebA; hypothetical protein 650452..652659 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461112 YP_001420292.1 CDS guaA NC_009725.1 652823 654364 D contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 652823..654364 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461113 YP_001420293.1 CDS RBAM_006770 NC_009725.1 654466 654999 D sigma factor 654466..654999 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461114 YP_001420294.1 CDS RBAM_006780 NC_009725.1 654981 656420 D hypothetical protein 654981..656420 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461115 YP_001420295.1 CDS pbuG NC_009725.1 656777 658099 D hypoxanthine/guanine permease PbuG; PbuG 656777..658099 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460997 YP_001420296.1 CDS yebC NC_009725.1 658297 659079 D hypothetical protein YebC; YebC 658297..659079 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460998 YP_001420297.1 CDS yebD NC_009725.1 659218 659391 D hypothetical protein YebD; hypothetical protein 659218..659391 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460999 YP_001420298.1 CDS yebE NC_009725.1 659513 660067 D hypothetical protein YebE; hypothetical protein 659513..660067 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461000 YP_001420299.1 CDS yebG NC_009725.1 660064 660261 D hypothetical protein YebG; hypothetical protein 660064..660261 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461001 YP_001420300.1 CDS purE NC_009725.1 660574 661062 D phosphoribosylaminoimidazole carboxylase PurE; hypothetical protein 660574..661062 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461058 YP_001420301.1 CDS purK NC_009725.1 661016 662197 D With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit 661016..662197 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461059 YP_001420302.1 CDS purB NC_009725.1 662197 663489 D Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 662197..663489 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461060 YP_001420303.1 CDS purC NC_009725.1 663565 664284 D catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 663565..664284 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461061 YP_001420304.1 CDS purS NC_009725.1 664284 664538 D With PurL and PurQ catalyzes the conversion of formylglycinamide ribonucleotide, ATP, and glutamine to formylglycinamidine ribonucleotide, ADP, and glutamate in the fourth step of the purine biosynthetic pathway; phosphoribosylformylglycinamidine synthase subunit PurS 664284..664538 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461062 YP_001420305.1 CDS purQ NC_009725.1 664535 665218 D catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase I 664535..665218 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460992 YP_001420306.1 CDS purL NC_009725.1 665202 667430 D catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase II 665202..667430 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460993 YP_001420307.1 CDS purF NC_009725.1 667406 668836 D Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 667406..668836 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460994 YP_001420308.1 CDS purM NC_009725.1 668927 669967 D catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 668927..669967 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460995 YP_001420309.1 CDS purN NC_009725.1 669964 670551 D glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate; phosphoribosylglycinamide formyltransferase 669964..670551 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460996 YP_001420310.1 CDS purH NC_009725.1 670548 672086 D involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 670548..672086 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462614 YP_001420311.1 CDS purD NC_009725.1 672102 673370 D catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 672102..673370 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462615 YP_001420312.1 CDS yerA NC_009725.1 673892 675634 D adenine deaminase YerA; hypothetical protein 673892..675634 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462616 YP_001420313.1 CDS yerB NC_009725.1 675659 676654 D hypothetical protein YerB; hypothetical protein 675659..676654 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462617 YP_001420314.1 CDS yerC NC_009725.1 676657 676968 D conserved hypothetical protein YerC; hypothetical protein 676657..676968 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462618 YP_001420315.1 CDS yerD NC_009725.1 677004 678578 R glutamate synthase YerD; hypothetical protein complement(677004..678578) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461224 YP_001420316.1 CDS pcrB NC_009725.1 678774 679463 D PcrB-like protein; GGGP synthase; member of prenyltransferases that transfer isoprenoid groups to nonisoprenoid acceptors; functions in form GGGP from glycerol-1-phosphate (G-1-P) and geranylgeranyl pyrophosphate (GGPP); important in lipid metabolism and especially important as the ether linkages in archaea are different than those in bacteria; GGGP synthase lies at the branch point for membrane lipid biosynthesis; cytosolic; T acidophilum protein acts as a homodimer while M thermoautotrophicum protein has been reported to function as a pentamer; geranylgeranylglyceryl phosphate synthase-like protein 678774..679463 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461225 YP_001420317.1 CDS pcrA NC_009725.1 679521 681740 D ATP-dependent DNA helicase PcrA; PcrA 679521..681740 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461226 YP_001420318.1 CDS ligA NC_009725.1 681762 683771 D this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; NAD-dependent DNA ligase LigA 681762..683771 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461227 YP_001420319.1 CDS yerH NC_009725.1 683787 684983 D hypothetical protein YerH; hypothetical protein 683787..684983 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461228 YP_001420320.1 CDS yerI NC_009725.1 685221 686216 D conserved hypothetical protein YerI; hypothetical protein 685221..686216 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463062 YP_001420321.1 CDS sapB NC_009725.1 686254 686946 R hypothetical protein SapB; hypothetical protein complement(686254..686946) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463063 YP_001420322.1 CDS opuE NC_009725.1 687067 688545 R proline transporter OpuE; OpuE complement(687067..688545) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463064 YP_001420323.1 CDS gatC NC_009725.1 688967 689257 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C 688967..689257 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463065 YP_001420324.1 CDS gatA NC_009725.1 689272 690729 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 689272..690729 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463066 YP_001420325.1 CDS gatB NC_009725.1 690743 692173 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 690743..692173 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461698 YP_001420326.1 CDS yerO NC_009725.1 692237 693085 R transcription regulator (tetr/acrr family) YerO; hypothetical protein complement(692237..693085) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461699 YP_001420327.1 CDS swrC NC_009725.1 693214 696357 D multidrug efflux pump; self resistance against surfactin; essential for swarming motility; SwrC 693214..696357 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461700 YP_001420328.1 CDS yerQ NC_009725.1 696509 697420 D similar to YegS from E. coli; lipid kinase 696509..697420 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461701 YP_001420329.1 CDS yefA NC_009725.1 697568 698962 D RNA methyltransferase YefA; hypothetical protein 697568..698962 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461702 YP_001420330.1 CDS RBAM_007140 NC_009725.1 699448 701019 D type I restriction-modification system methyltransferase subunit like protein 699448..701019 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463265 YP_001420331.1 CDS RBAM_007150 NC_009725.1 701003 702229 D hypothetical protein 701003..702229 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463266 YP_001420332.1 CDS RBAM_007160 NC_009725.1 702216 705368 D hypothetical protein 702216..705368 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463267 YP_001420333.1 CDS RBAM_007170 NC_009725.1 705514 706533 D hypothetical protein 705514..706533 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463268 YP_001420334.1 CDS RBAM_007180 NC_009725.1 706724 707890 D hypothetical protein 706724..707890 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463269 YP_001420335.1 CDS RBAM_007190 NC_009725.1 708515 709018 R hypothetical protein complement(708515..709018) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462367 YP_001420336.1 CDS yeeF2 NC_009725.1 709038 709493 R hypothetical protein YeeF2; hypothetical protein complement(709038..709493) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462368 YP_001420337.1 CDS RBAM_007210 NC_009725.1 709577 710047 R hypothetical protein complement(709577..710047) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462369 YP_001420338.1 CDS yeeF1 NC_009725.1 710052 712055 R hypothetical protein YeeF1; hypothetical protein complement(710052..712055) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462370 YP_001420339.1 CDS yeeI NC_009725.1 712354 713073 D conserved hypothetical protein YeeI; hypothetical protein 712354..713073 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462371 YP_001420340.1 CDS cotJA NC_009725.1 713699 713947 D spore coat peptide assembly protein CotJA; CotJA 713699..713947 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462113 YP_001420341.1 CDS cotJB NC_009725.1 713931 714194 D spore coat peptide assembly protein CotJB; CotJB 713931..714194 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462114 YP_001420342.1 CDS cotJC NC_009725.1 714209 714778 D spore coat peptide assembly protein CotJC; CotJC 714209..714778 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462115 YP_001420343.1 CDS yesJ NC_009725.1 714867 715400 D conserved hypothetical protein YesJ; hypothetical protein 714867..715400 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462116 YP_001420344.1 CDS RBAM_007280 NC_009725.1 715429 715707 D hypothetical protein 715429..715707 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462117 YP_001420345.1 CDS yetF NC_009725.1 715821 716510 D conserved hypothetical protein YetF; hypothetical protein 715821..716510 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459510 YP_001420346.1 CDS yetG NC_009725.1 716543 716884 R conserved hypothetical protein YetG; hypothetical protein complement(716543..716884) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459511 YP_001420347.1 CDS yetH NC_009725.1 716954 717319 R conserved hypothetical protein YetH; hypothetical protein complement(716954..717319) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459512 YP_001420348.1 CDS yetI NC_009725.1 717460 718344 D conserved hypothetical protein YetI; hypothetical protein 717460..718344 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459513 YP_001420349.1 CDS yezD NC_009725.1 718658 718831 D hypothetical protein YezD; hypothetical protein 718658..718831 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459514 YP_001420350.1 CDS RBAM_007340 NC_009725.1 718861 719163 D hypothetical protein 718861..719163 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459995 YP_001420351.1 CDS yetJ NC_009725.1 719255 719899 D conserved hypothetical protein YetJ; hypothetical protein 719255..719899 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459996 YP_001420352.1 CDS yetL NC_009725.1 719938 720450 R transcription regulator MarR family homolog YetL; hypothetical protein complement(719938..720450) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459997 YP_001420353.1 CDS yetM NC_009725.1 720613 721722 D salicylate 1-monooxygenase YetM; hypothetical protein 720613..721722 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459998 YP_001420354.1 CDS yetN NC_009725.1 721759 722829 R hypothetical protein YetN; hypothetical protein complement(721759..722829) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459999 YP_001420355.1 CDS yetO NC_009725.1 722994 726176 D cytochrome P450/NADPH-cytochrome P450 reductase YetO; hypothetical protein 722994..726176 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460287 YP_001420356.1 CDS RBAM_007400 NC_009725.1 726469 727062 D hypothetical protein 726469..727062 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460288 YP_001420357.1 CDS RBAM_007410 NC_009725.1 727055 727366 D hypothetical protein 727055..727366 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460289 YP_001420358.1 CDS RBAM_007420 NC_009725.1 727367 728257 D ABC transporter ATP-binding protein 727367..728257 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460290 YP_001420359.1 CDS RBAM_007430 NC_009725.1 728272 729012 D ABC transporter permease 728272..729012 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460291 YP_001420360.1 CDS RBAM_007440 NC_009725.1 729067 729789 D hypothetical protein 729067..729789 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460257 YP_001420361.1 CDS RBAM_007450 NC_009725.1 730955 731659 D hypothetical protein 730955..731659 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460258 YP_001420362.1 CDS RBAM_007460 NC_009725.1 731672 732664 D hypothetical protein 731672..732664 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460259 YP_001420363.1 CDS RBAM_007470 NC_009725.1 732670 734013 D hypothetical protein 732670..734013 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460260 YP_001420364.1 CDS RBAM_007480 NC_009725.1 734040 734849 D hypothetical protein 734040..734849 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460261 YP_001420365.1 CDS RBAM_007490 NC_009725.1 734894 735523 D hypothetical protein 734894..735523 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461565 YP_001420366.1 CDS RBAM_007500 NC_009725.1 735548 736360 D hypothetical protein 735548..736360 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461566 YP_001420367.1 CDS yfnI NC_009725.1 736816 738744 D phosphoglycerol transferase YfnI; hypothetical protein 736816..738744 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461567 YP_001420368.1 CDS yfnH NC_009725.1 738960 739724 D glucose-1-phosphate cytidylyltransferase YfnH; hypothetical protein 738960..739724 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461568 YP_001420369.1 CDS yfnG NC_009725.1 739731 740699 D CDR-glucose 4,6-dehydratase YfnG; hypothetical protein 739731..740699 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461569 YP_001420370.1 CDS yfnF NC_009725.1 740724 741635 D hypothetical protein YfnF; hypothetical protein 740724..741635 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460957 YP_001420371.1 CDS yfnE NC_009725.1 741664 742824 D hypothetical protein YfnE; hypothetical protein 741664..742824 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460958 YP_001420372.1 CDS yfnD NC_009725.1 742840 743778 D hypothetical protein YfnD; hypothetical protein 742840..743778 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460959 YP_001420373.1 CDS yfnC NC_009725.1 743808 745037 R fosfidomycin resistance protein YfnC; hypothetical protein complement(743808..745037) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460960 YP_001420374.1 CDS yfnA NC_009725.1 745155 746540 R metabolite transporter YfnA; hypothetical protein complement(745155..746540) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460961 YP_001420375.1 CDS yfmT NC_009725.1 746785 748242 D benzaldehyde dehydrogenase YfmT; hypothetical protein 746785..748242 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460962 YP_001420376.1 CDS yfmS NC_009725.1 748258 749112 D methyl-accepting chemotaxis protein YfmS; hypothetical protein 748258..749112 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462392 YP_001420377.1 CDS yhxD NC_009725.1 749241 750140 D dehydrogenase YhxD; hypothetical protein 749241..750140 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462393 YP_001420378.1 CDS RBAM_007620 NC_009725.1 750187 751254 R beta 1,4 glucosyltransferase complement(750187..751254) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462394 YP_001420379.1 CDS yfmR NC_009725.1 751413 753302 D ABC transporter (ATP-binding protein) YfmR; hypothetical protein 751413..753302 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462395 YP_001420380.1 CDS yfmP NC_009725.1 753494 753916 D transcription regulator MerR family YfmP; hypothetical protein 753494..753916 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462396 YP_001420381.1 CDS yfmO NC_009725.1 753980 755164 D multidrug-efflux transporter YfmO; hypothetical protein 753980..755164 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462397 YP_001420382.1 CDS yfmM NC_009725.1 755208 756764 R ABC transporter (ATP-binding protein) YfmM; hypothetical protein complement(755208..756764) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460644 YP_001420383.1 CDS yfml NC_009725.1 756935 758065 D RNA helicase Yfml; hypothetical protein 756935..758065 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460645 YP_001420384.1 CDS yfmJ NC_009725.1 758637 759656 R NADP-dependent oxidoreductase YfmJ; hypothetical protein complement(758637..759656) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460647 YP_001420385.1 CDS yfmB NC_009725.1 759785 760135 R hypothetical protein YfmB; hypothetical protein complement(759785..760135) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460648 YP_001420386.1 CDS yflT NC_009725.1 760326 760673 D general stress protein 17M (GSP17M) YflT; hypothetical protein 760326..760673 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463180 YP_001420387.1 CDS pel NC_009725.1 760837 762102 D COG3866; pectate lyase; Pel 760837..762102 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463181 YP_001420388.1 CDS yflS NC_009725.1 762227 763663 D 2-oxoglutarate/malate translocator YflS; hypothetical protein 762227..763663 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463182 YP_001420389.1 CDS RBAM_007740 NC_009725.1 763771 764457 D hypothetical protein 763771..764457 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463183 YP_001420390.1 CDS RBAM_007750 NC_009725.1 764571 766568 D proposed to be involved in surface adhesion; GXT repeat-containing collagen-like protein 764571..766568 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463184 YP_001420391.1 CDS RBAM_007760 NC_009725.1 766695 767945 D pfam02018; carbohydrate binding domain; proposed to be involved in surface adhesion; GXT repeat-containing collagen-like protein 766695..767945 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463185 YP_001420392.1 CDS RBAM_007770 NC_009725.1 768125 769504 D collagen like triple helix with GXT repeats; proposed to be involved in surface adhesion; hypothetical protein 768125..769504 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462342 YP_001420393.1 CDS citS NC_009725.1 769687 771291 D two component sensor histidine kinase; COG3290, CitA like family regulating citrate/malate metabolism by response to the environmental Mg-citrate complex; CitS 769687..771291 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462343 YP_001420394.1 CDS citT NC_009725.1 771288 771968 D two component response regulator; COG4565, response to the environmental Mg-citrate complex; regulation of citrate/malate metabolism; hypothetical protein 771288..771968 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462344 YP_001420395.1 CDS yflP NC_009725.1 771981 772943 D conserved hypothetical protein YflP; hypothetical protein 771981..772943 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462345 YP_001420396.1 CDS citM NC_009725.1 773136 774434 D magnesium citrate secondary transporter CitM; CitM 773136..774434 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462346 YP_001420397.1 CDS yflN NC_009725.1 774486 775280 D hypothetical protein YflN; hypothetical protein 774486..775280 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462347 YP_001420398.1 CDS yflM NC_009725.1 775404 776495 D nitric oxide synthase oxygenase YflM; hypothetical protein 775404..776495 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462797 YP_001420399.1 CDS yflL NC_009725.1 776489 776761 R catalyzes the hydrolysis of acylphosphate; acylphosphatase complement(776489..776761) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462798 YP_001420400.1 CDS yflK NC_009725.1 776829 777488 D conserved hypothetical protein YflK; hypothetical protein 776829..777488 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462799 YP_001420401.1 CDS yflJ NC_009725.1 777528 777662 R hypothetical protein YflJ; hypothetical protein complement(777528..777662) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462800 YP_001420402.1 CDS yflI NC_009725.1 777841 777996 R hypothetical protein YflI; hypothetical protein complement(777841..777996) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462801 YP_001420403.1 CDS yflH NC_009725.1 778079 778390 R hypothetical protein YflH; hypothetical protein complement(778079..778390) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462802 YP_001420404.1 CDS yflG NC_009725.1 778447 779196 R catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mnin Bacillus subtilis the protein in this cluster is considered non-essential; methionine aminopeptidase complement(778447..779196) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460219 YP_001420405.1 CDS nagP NC_009725.1 779361 780743 D phosphotransferase system (PTS) N-acetylglucosamine-specific enzymeIICB component NagP; NagP 779361..780743 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460220 YP_001420406.1 CDS yfmQ NC_009725.1 780870 781313 D hypothetical protein YfmQ; hypothetical protein 780870..781313 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460221 YP_001420407.1 CDS yflE NC_009725.1 781354 783291 R conserved hypothetical protein; repressed by root exudate; hypothetical protein complement(781354..783291) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460222 YP_001420408.1 CDS yflB NC_009725.1 783537 783914 D hypothetical protein YflB; hypothetical protein 783537..783914 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460223 YP_001420409.1 CDS cotP NC_009725.1 783924 784355 R spore coat protein CotP; CotP complement(783924..784355) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460224 YP_001420410.1 CDS ydgA NC_009725.1 784371 784613 R hypothetical protein YdgA; hypothetical protein complement(784371..784613) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462922 YP_001420411.1 CDS ydgB NC_009725.1 784628 784888 R hypothetical protein YdgB; hypothetical protein complement(784628..784888) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462923 YP_001420412.1 CDS treP NC_009725.1 785159 786574 D phosphotransferase system (PTS) trehalose-specific enzyme IIBC component TreP; TreP 785159..786574 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462924 YP_001420413.1 CDS treA NC_009725.1 786650 788335 D trehalose-6-phosphate hydrolase TreA; TreA 786650..788335 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462925 YP_001420414.1 CDS treR NC_009725.1 788357 789073 D trehalose operon transcriptional repressor TreR; TreR 788357..789073 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462926 YP_001420415.1 CDS yfkO NC_009725.1 789206 789871 D NAD(P)H nitroreductase YfkO; hypothetical protein 789206..789871 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462927 YP_001420416.1 CDS RBAM_008010 NC_009725.1 789907 790668 R hypothetical protein complement(789907..790668) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461105 YP_001420417.1 CDS RBAM_008020 NC_009725.1 790665 791804 R hypothetical protein complement(790665..791804) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461106 YP_001420418.1 CDS yfkN NC_009725.1 792014 796306 R in Escherichia coli this is a periplasmic enzyme while in gram positive organisms it may be anchored at the cell surface; this protein appears to consist of a dimer fusion; functions during ribonucleic acid degradation; 2',3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate; bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein complement(792014..796306) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461107 YP_001420419.1 CDS yfkM NC_009725.1 796527 797042 D conserved hypothetical protein YfkM; hypothetical protein 796527..797042 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461108 YP_001420420.1 CDS RBAM_008050 NC_009725.1 797063 798094 R transcriptional regulator complement(797063..798094) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461109 YP_001420421.1 CDS RBAM_008060 NC_009725.1 798231 798935 R shikimate dehydrogenase complement(798231..798935) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461110 YP_001420422.1 CDS RBAM_008070 NC_009725.1 799047 799958 R shikimate dehydrogenase complement(799047..799958) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462831 YP_001420423.1 CDS aroD NC_009725.1 799997 800758 R catalyzes the dehydration of 3-dehydroquinate to form 3-dehydroshikimate in aromatic amino acid biosynthesis; 3-dehydroquinate dehydratase complement(799997..800758) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462832 YP_001420424.1 CDS yfkL NC_009725.1 800785 801978 R conserved hypothetical protein YfkL; hypothetical protein complement(800785..801978) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462833 YP_001420425.1 CDS yfkK NC_009725.1 802315 802530 R hypothetical protein YfkK; hypothetical protein complement(802315..802530) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462834 YP_001420426.1 CDS yfkJ NC_009725.1 802686 803159 D protein-tyrosine phosphatase YfkJ; hypothetical protein 802686..803159 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462835 YP_001420427.1 CDS yfkI NC_009725.1 803173 803499 D conserved hypothetical protein YfkI; hypothetical protein 803173..803499 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462836 YP_001420428.1 CDS yfkH NC_009725.1 803511 804350 D conserved hypothetical protein YfkH; hypothetical protein 803511..804350 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461182 YP_001420429.1 CDS yfkF NC_009725.1 804536 805714 R hypothetical protein YfkF; hypothetical protein complement(804536..805714) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461183 YP_001420430.1 CDS yfkE NC_009725.1 805873 806928 D H+/Ca2+ antiporter YfkE; hypothetical protein 805873..806928 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461184 YP_001420431.1 CDS yfkD NC_009725.1 807002 807793 D hypothetical protein YfkD; hypothetical protein 807002..807793 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461185 YP_001420432.1 CDS yfkC NC_009725.1 807822 808655 R conserved hypothetical protein YfkC; hypothetical protein complement(807822..808655) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461186 YP_001420433.1 CDS yfkA NC_009725.1 808662 809783 R conserved hypothetical protein YfkA; hypothetical protein complement(808662..809783) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461187 YP_001420434.1 CDS yfjT NC_009725.1 809930 810115 D hypothetical protein YfjT; hypothetical protein 809930..810115 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461570 YP_001420435.1 CDS pdaA NC_009725.1 810216 811007 D polysaccharide deacetylase PdaA; PdaA 810216..811007 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461571 YP_001420436.1 CDS yfjR NC_009725.1 811042 811902 R hypothetical oxidoreductase YfjR; hypothetical protein complement(811042..811902) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461572 YP_001420437.1 CDS RBAM_008220 NC_009725.1 811951 812598 R hypothetical protein complement(811951..812598) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461573 YP_001420438.1 CDS yfjQ NC_009725.1 812662 813621 R divalent cation transport protein YfjQ; hypothetical protein complement(812662..813621) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461574 YP_001420439.1 CDS yfjP NC_009725.1 813728 814591 D DNA-3-methyladenine glycosidase II YfjP; hypothetical protein 813728..814591 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461575 YP_001420440.1 CDS yfjO NC_009725.1 814725 816125 D RNA methyltransferase YfjO; hypothetical protein 814725..816125 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461703 YP_001420441.1 CDS RBAM_008260 NC_009725.1 816122 816343 R hypothetical protein complement(816122..816343) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461704 YP_001420442.1 CDS RBAM_008270 NC_009725.1 816905 817204 D hypothetical protein 816905..817204 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461705 YP_001420443.1 CDS yfjN NC_009725.1 818093 819076 D conserved hypothetical protein YfjN; hypothetical protein 818093..819076 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461706 YP_001420444.1 CDS yfjM NC_009725.1 819234 819734 D hypothetical protein YfjM; hypothetical protein 819234..819734 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461707 YP_001420445.1 CDS acoA NC_009725.1 819990 820991 D acetoin dehydrogenase E1 component (TPP-dependent alpha subunit) AcoA; hypothetical protein 819990..820991 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461708 YP_001420446.1 CDS acoB NC_009725.1 820993 822021 D acetoin dehydrogenase E1 component (TPP-dependent beta subunit) AcoB; hypothetical protein 820993..822021 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460712 YP_001420447.1 CDS acoC NC_009725.1 822036 823229 D acetoin dehydrogenase E2 component (dihydrolipoamide acetyltransferase) AcoC; branched-chain alpha-keto acid dehydrogenase subunit E2 822036..823229 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460713 YP_001420448.1 CDS acoL NC_009725.1 823244 824623 D E3 component of acetoin cleaving system; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 823244..824623 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460714 YP_001420449.1 CDS acoR NC_009725.1 824730 826538 D transcription activator of acetoin dehydrogenaseoperon AcoR; hypothetical protein 824730..826538 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460715 YP_001420450.1 CDS sspH NC_009725.1 826604 826786 D small, acid-soluble spore protein SspH; SspH 826604..826786 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460716 YP_001420451.1 CDS glvA NC_009725.1 826957 828306 D maltose-6'-phosphate glucosid GlvA; GlvA 826957..828306 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460717 YP_001420452.1 CDS glvR NC_009725.1 828375 829136 D HTH-type transcriptional regulator GlvR; GlvR 828375..829136 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461463 YP_001420453.1 CDS glvC NC_009725.1 829153 830739 D phosphotransferase system (PTS) maltose-specificenzyme IICB component GlvC; GlvC 829153..830739 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461464 YP_001420454.1 CDS RBAM_008390 NC_009725.1 830927 833254 D hypothetical protein 830927..833254 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461465 YP_001420455.1 CDS yfiB NC_009725.1 833550 835283 D ABC transporter (ATP binding protein) YfiB; hypothetical protein 833550..835283 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461466 YP_001420456.1 CDS yfiC NC_009725.1 835264 837081 D hypothetical ABC transporter ATP-binding protein YfiC; hypothetical protein 835264..837081 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461467 YP_001420457.1 CDS yfiD NC_009725.1 837249 837653 D conserved hypothetical protein YfiD; hypothetical protein 837249..837653 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461468 YP_001420458.1 CDS yfiE NC_009725.1 837670 838527 D conserved hypothetical protein YfiE; hypothetical protein 837670..838527 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461176 YP_001420459.1 CDS ctaO NC_009725.1 838893 839840 D protoheme IX farnesyltransferase CtaO; hypothetical protein 838893..839840 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461177 YP_001420460.1 CDS padR NC_009725.1 839878 840429 R padC transcriptional repressor PadR; PadR complement(839878..840429) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461178 YP_001420461.1 CDS RBAM_008460 NC_009725.1 840662 841264 D hypothetical protein 840662..841264 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461179 YP_001420462.1 CDS yfiQ NC_009725.1 841255 842343 D surface adhesion protein; hypothetical protein 841255..842343 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461180 YP_001420463.1 CDS RBAM_008480 NC_009725.1 842665 845076 D hypothetical protein 842665..845076 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461181 YP_001420464.1 CDS RBAM_008490 NC_009725.1 845099 845371 D RNAse inhibitor 845099..845371 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461073 YP_001420465.1 CDS yfiT NC_009725.1 845397 845939 D hypothetical protein YfiT; metal-dependent hydrolase 845397..845939 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461074 YP_001420466.1 CDS yfiU NC_009725.1 845899 847491 R multidrug-efflux transporter YfiU; hypothetical protein complement(845899..847491) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461075 YP_001420467.1 CDS yfiV NC_009725.1 847600 848082 R conserved hypothetical protein YfiV; hypothetical protein complement(847600..848082) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461076 YP_001420468.1 CDS yfiX NC_009725.1 848251 850821 D conserved hypothetical protein YfiX; hypothetical protein 848251..850821 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461077 YP_001420469.1 CDS yfhB NC_009725.1 850916 851800 D conserved hypothetical protein YfhB; hypothetical protein 850916..851800 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461078 YP_001420470.1 CDS yfhC NC_009725.1 851877 852461 D conserved hypothetical protein YfhC; hypothetical protein 851877..852461 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462625 YP_001420471.1 CDS yfhD NC_009725.1 852502 852693 R hypothetical protein YfhD; hypothetical protein complement(852502..852693) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462626 YP_001420472.1 CDS yfhE NC_009725.1 852764 852874 R hypothetical protein YfhE; hypothetical protein complement(852764..852874) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462627 YP_001420473.1 CDS yfhF NC_009725.1 852932 853831 R conserved hypothetical protein YfhF; hypothetical protein complement(852932..853831) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462628 YP_001420474.1 CDS recX NC_009725.1 853923 854714 D binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities; recombination regulator RecX 853923..854714 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462629 YP_001420475.1 CDS yfhH NC_009725.1 854721 855035 D conserved hypothetical protein YfhH; hypothetical protein 854721..855035 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462630 YP_001420476.1 CDS yfhI NC_009725.1 855173 856372 D conserved hypothetical protein YfhI; hypothetical protein 855173..856372 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462619 YP_001420477.1 CDS ybfJ NC_009725.1 856412 856801 R hypothetical protein YbfJ; hypothetical protein complement(856412..856801) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462620 YP_001420478.1 CDS mpr NC_009725.1 856764 857675 R extracellular metalloprotease precursorMpr; Mpr complement(856764..857675) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462621 YP_001420479.1 CDS sspK NC_009725.1 857822 857974 R SASP K; found in the forespore compartment; acid-soluble spore protein K complement(857822..857974) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462622 YP_001420480.1 CDS yfhJ NC_009725.1 858098 858367 D hypothetical protein YfhJ; hypothetical protein 858098..858367 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462623 YP_001420481.1 CDS yfhK NC_009725.1 858500 859027 D conserved hypothetical protein YfhK; hypothetical protein 858500..859027 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462624 YP_001420482.1 CDS yfhL NC_009725.1 859113 859448 D hypothetical protein YfhL; hypothetical protein 859113..859448 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460238 YP_001420483.1 CDS yfhM NC_009725.1 859441 860301 D conserved hypothetical protein YfhM; hypothetical protein 859441..860301 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460239 YP_001420484.1 CDS csbB NC_009725.1 860512 861492 D glycosyl transferase CsbB; hypothetical protein 860512..861492 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460240 YP_001420485.1 CDS fhO NC_009725.1 861529 864114 D hypothetical protein FhO; FhO 861529..864114 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460241 YP_001420486.1 CDS yfhP NC_009725.1 864111 865094 R conserved hypothetical protein YfhP; hypothetical protein complement(864111..865094) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460242 YP_001420487.1 CDS yfhQ NC_009725.1 865320 866417 D A/G-specific DNA glycosylase YfhQ; hypothetical protein 865320..866417 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460243 YP_001420488.1 CDS yfhS NC_009725.1 866424 866648 R hypothetical protein YfhS; hypothetical protein complement(866424..866648) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462786 YP_001420489.1 CDS fabL NC_009725.1 866730 867482 D Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-(acyl carrier protein) reductase 866730..867482 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462787 YP_001420490.1 CDS sspE NC_009725.1 867548 867718 D small acid-soluble spore protein SspE; SspE 867548..867718 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462788 YP_001420491.1 CDS ygaB NC_009725.1 867879 868145 D hypothetical protein YgaB; hypothetical protein 867879..868145 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462789 YP_001420492.1 CDS ygaC NC_009725.1 868281 868811 D conserved hypothetical protein YgaC; hypothetical protein 868281..868811 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462790 YP_001420493.1 CDS ygaD NC_009725.1 868894 870636 D ABC transporter ATP-binding protein YgaD; hypothetical protein 868894..870636 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462791 YP_001420494.1 CDS ygaE NC_009725.1 870716 871780 R conserved hypothetical protein YgaE; hypothetical protein complement(870716..871780) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460385 YP_001420495.1 CDS gsaB NC_009725.1 871990 873279 R converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate; glutamate-1-semialdehyde aminotransferase complement(871990..873279) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460386 YP_001420496.1 CDS ygaF NC_009725.1 873437 873910 D conserved hypothetical protein YgaF; hypothetical protein 873437..873910 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460387 YP_001420497.1 CDS perR NC_009725.1 874035 874472 D repressor of peroxide stress regulon; Fur homolog;repressor of ahpCF, katA, zosA, mrgA; transcriptional activator of srfA gene expression; PerR 874035..874472 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460388 YP_001420498.1 CDS ygzB NC_009725.1 874507 874860 R hypothetical protein YgzB; hypothetical protein complement(874507..874860) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460389 YP_001420499.1 CDS ygxA NC_009725.1 875063 875947 D hypothetical protein YgxA; hypothetical protein 875063..875947 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460390 YP_001420500.1 CDS RBAM_009040 NC_009725.1 882892 884463 D hypothetical protein 882892..884463 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460568 YP_001420501.1 CDS ygaJ NC_009725.1 884549 885247 D conserved hypothetical protein YgaJ; hypothetical protein 884549..885247 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460569 YP_001420502.1 CDS thiC NC_009725.1 885529 887301 D required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 885529..887301 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460570 YP_001420503.1 CDS ygaK NC_009725.1 887342 888709 R conserved hypothetical protein YgaK; hypothetical protein complement(887342..888709) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460571 YP_001420504.1 CDS senN NC_009725.1 888957 889136 D transcriptional regulatory protein SenN; SenN 888957..889136 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460572 YP_001420505.1 CDS katA NC_009725.1 889388 890833 R vegetative catalase KatA; KatA complement(889388..890833) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460138 YP_001420506.1 CDS RBAM_009100 NC_009725.1 891090 892025 D hypothetical protein 891090..892025 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460139 YP_001420507.1 CDS ssuB NC_009725.1 892206 893015 D aliphatic sulfonates transport ATP-binding protein SsuB; SsuB 892206..893015 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460140 YP_001420508.1 CDS ssuA NC_009725.1 893031 894020 D aliphatic sulfonates binding protein precursor SsuA; SsuA 893031..894020 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460141 YP_001420509.1 CDS ssuC NC_009725.1 894020 894853 D aliphatic sulfonates transport permease protein SsuC; SsuC 894020..894853 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460142 YP_001420510.1 CDS ssuD NC_009725.1 894878 896014 D catalyzes the release of sulfite from alkanesulfonates; alkanesulfonate monooxygenase 894878..896014 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460143 YP_001420511.1 CDS rpsN NC_009725.1 896189 896458 D located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 896189..896458 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460503 YP_001420512.1 CDS ygaO NC_009725.1 896479 896946 R hypothetical lipoprotein YgaO; hypothetical protein complement(896479..896946) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460504 YP_001420513.1 CDS yhzB NC_009725.1 897500 898123 R conserved hypothetical protein YhzB; hypothetical protein complement(897500..898123) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460506 YP_001420514.1 CDS yhbA NC_009725.1 898199 899368 D conserved hypothetical protein YhbA; hypothetical protein 898199..899368 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460507 YP_001420515.1 CDS yhbB NC_009725.1 899444 900355 D hypothetical protein YhbB; hypothetical protein 899444..900355 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462094 YP_001420516.1 CDS cspR NC_009725.1 900401 900874 D rRNA methylase involved in elicitation plant basal defence; hypothetical protein 900401..900874 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462095 YP_001420517.1 CDS yhbD NC_009725.1 900972 901643 D hypothetical protein YhbD; hypothetical protein 900972..901643 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462096 YP_001420518.1 CDS yhbE NC_009725.1 901634 902347 D hypothetical protein YhbE; hypothetical protein 901634..902347 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462097 YP_001420519.1 CDS yhbF NC_009725.1 902359 903069 D conserved hypothetical protein YhbF; hypothetical protein 902359..903069 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462098 YP_001420520.1 CDS prkA NC_009725.1 903428 905323 D serine protein kinase PrkA; hypothetical protein 903428..905323 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462099 YP_001420521.1 CDS yhbH NC_009725.1 905514 906698 D stress response UPF0229 protein YhbH; hypothetical protein 905514..906698 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461339 YP_001420522.1 CDS yhbI NC_009725.1 906879 907343 D transcriptional regulator (MarR family)YhbI; hypothetical protein 906879..907343 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461340 YP_001420523.1 CDS yhbJ NC_009725.1 907380 908045 D hypothetical protein YhbJ; hypothetical protein 907380..908045 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461341 YP_001420524.1 CDS yhcA NC_009725.1 908086 909681 D hypothetical transport protein YhcA; hypothetical protein 908086..909681 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461342 YP_001420525.1 CDS yhcB NC_009725.1 909706 910239 D conserved hypothetical protein YhcB; hypothetical protein 909706..910239 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461343 YP_001420526.1 CDS yhcC NC_009725.1 910252 910623 D hypothetical protein YhcC; hypothetical protein 910252..910623 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461344 YP_001420527.1 CDS yhcE NC_009725.1 910743 911510 D hypothetical protein YhcE; hypothetical protein 910743..911510 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463082 YP_001420528.1 CDS yhcF NC_009725.1 911513 911890 D transcriptional regulator YhcF; hypothetical protein 911513..911890 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463083 YP_001420529.1 CDS yhcG NC_009725.1 911862 912596 D ABC transporter ATP-binding protein YhcG; hypothetical protein 911862..912596 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463084 YP_001420530.1 CDS yhcH NC_009725.1 912597 913514 D ABC transporter (ATP-binding protein) YhcH; hypothetical protein 912597..913514 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463085 YP_001420531.1 CDS yhcI NC_009725.1 913507 914454 D conserved hypothetical protein YhcI; hypothetical protein 913507..914454 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463086 YP_001420532.1 CDS cspB NC_009725.1 914546 914746 R major cold shock protein; involved in elicitation plant basal defence; hypothetical protein complement(914546..914746) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463087 YP_001420533.1 CDS yhcJ NC_009725.1 915128 915958 D hypothetical lipoprotein YhcJ; hypothetical protein 915128..915958 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459976 YP_001420534.1 CDS yhcK NC_009725.1 915975 917054 R conserved hypothetical protein YhcK; hypothetical protein complement(915975..917054) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459977 YP_001420535.1 CDS yhcL NC_009725.1 917206 918597 D sodium-dicarboxylate symporter YhcL; hypothetical protein 917206..918597 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459978 YP_001420536.1 CDS yhcM NC_009725.1 918698 919276 R hypothetical protein YhcM; hypothetical protein complement(918698..919276) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459979 YP_001420537.1 CDS yhcN NC_009725.1 919421 919960 D lipoprotein YhcN; hypothetical protein 919421..919960 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459980 YP_001420538.1 CDS yhcP NC_009725.1 920093 920983 D hypothetical protein YhcP; hypothetical protein 920093..920983 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459981 YP_001420539.1 CDS yhcQ NC_009725.1 920984 921652 R conserved hypothetical protein YhcQ; hypothetical protein complement(920984..921652) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461067 YP_001420540.1 CDS yhcR NC_009725.1 921845 923674 D 5'-nucleotidase YhcR; hypothetical protein 921845..923674 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461068 YP_001420541.1 CDS yhcS NC_009725.1 923895 924491 D conserved hypothetical protein YhcS; hypothetical protein 923895..924491 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461069 YP_001420542.1 CDS yhcT NC_009725.1 924488 925396 R hypothetical pseudouridine synthase yhcT (pseudouridylate synthase) (Uracil hydrolyase) YhcT; hypothetical protein complement(924488..925396) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461070 YP_001420543.1 CDS yhcU NC_009725.1 925506 925901 D hypothetical protein YhcU; hypothetical protein 925506..925901 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461071 YP_001420544.1 CDS yhcV NC_009725.1 926032 926454 D conserved hypothetical protein YhcV; hypothetical protein 926032..926454 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461072 YP_001420545.1 CDS yhcW NC_009725.1 926582 927271 D phosphoglycolate phosphatase YhcW; hypothetical protein 926582..927271 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460491 YP_001420546.1 CDS yhcX NC_009725.1 927264 928802 D predicted nitrilase; possibly involved in Trp dependent IAA synthesis. Mutant yhcX was found slightly impaired in IAA synthesis and plant growth promotion; hypothetical protein 927264..928802 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460492 YP_001420547.1 CDS yhxA NC_009725.1 929055 930398 D aminotransferase YhxA; aminotransferase 929055..930398 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460493 YP_001420548.1 CDS glpP NC_009725.1 930415 930990 D glycerol uptake operon antiterminator regulatoryprotein GlpP; hypothetical protein 930415..930990 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460494 YP_001420549.1 CDS glpF NC_009725.1 931160 931990 D glycerol uptake facilitator GlpF; hypothetical protein 931160..931990 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460495 YP_001420550.1 CDS glpK NC_009725.1 932007 933497 D Converts glycerol and ADP to glycerol-3-phosphate and ADP; glycerol kinase 932007..933497 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460496 YP_001420551.1 CDS glpD NC_009725.1 933635 935302 D glycerol-3-phosphate dehydrogenase GlpD; GlpD 933635..935302 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462975 YP_001420552.1 CDS yhxB NC_009725.1 935442 937184 D phosphomannomutase; likely to be involved in exopolysaccharide synthesis; hypothetical protein 935442..937184 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462976 YP_001420553.1 CDS yhcY NC_009725.1 937330 938472 D sensor histidine kinase; COG4585, two component signal transduction; hypothetical protein 937330..938472 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462977 YP_001420554.1 CDS yhcZ NC_009725.1 938472 939116 D two component response regulator; COG2197, CitB family, RR containing a CheY-like receiver domain and a HTH DNA-binding domain; hypothetical protein 938472..939116 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462978 YP_001420555.1 CDS yhdA NC_009725.1 939113 939640 D conserved hypothetical protein YhdA; hypothetical protein 939113..939640 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462979 YP_001420556.1 CDS yhdB NC_009725.1 939654 939896 R hypothetical protein YhdB; hypothetical protein complement(939654..939896) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462980 YP_001420557.1 CDS yhdC NC_009725.1 940088 940411 D hypothetical protein YhdC; hypothetical protein 940088..940411 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462486 YP_001420558.1 CDS lytF NC_009725.1 940456 941910 R endopeptidase lytF precursor LytF; LytF complement(940456..941910) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462487 YP_001420559.1 CDS yhdE NC_009725.1 942089 942523 R conserved hypothetical protein YhdE; hypothetical protein complement(942089..942523) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462488 YP_001420560.1 CDS ygxB NC_009725.1 942656 944218 R conserved hypothetical protein YgxB; hypothetical protein complement(942656..944218) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462489 YP_001420561.1 CDS spoVR NC_009725.1 944340 945746 D stage V sporulation protein SpoVR; hypothetical protein 944340..945746 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462490 YP_001420562.1 CDS phoA NC_009725.1 945785 947164 R alkaline phosphatase IV precursor (APase IV) PhoA; PhoA complement(945785..947164) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462491 YP_001420563.1 CDS lytE NC_009725.1 947624 948448 D cell wall hydrolase phosphatase-associated protein LytE; hypothetical protein 947624..948448 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461135 YP_001420564.1 CDS citR NC_009725.1 948517 949392 R HTH-type transcriptional regulator (Citrate synthase I repressor) CitR; CitR complement(948517..949392) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461136 YP_001420565.1 CDS citA NC_009725.1 949496 950605 D citrate synthase I CitA; hypothetical protein 949496..950605 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461137 YP_001420566.1 CDS yhdF NC_009725.1 950685 951554 D glucose 1-dehydrogenase YhdF; hypothetical protein 950685..951554 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461138 YP_001420567.1 CDS yhdG NC_009725.1 951888 953291 D amino acid transporter YhdG; hypothetical protein 951888..953291 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461139 YP_001420568.1 CDS yhdH NC_009725.1 953406 954761 D sodium-dependent transporter YhdH; hypothetical protein 953406..954761 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461140 YP_001420569.1 CDS yhdK NC_009725.1 954798 955088 R anti-sigma M factor YhdK; hypothetical protein complement(954798..955088) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462254 YP_001420570.1 CDS yhdL NC_009725.1 955076 956149 R anti-sigma M factor YhdL; hypothetical protein complement(955076..956149) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462255 YP_001420571.1 CDS sigM NC_009725.1 956142 956633 R Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; in B. subtilis this protein is activated in response to cell wall antibiotics, ethanol, heat, acid, and superoxide stress; RNA polymerase sigma factor SigM complement(956142..956633) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462256 YP_001420572.1 CDS yhdO NC_009725.1 956874 957473 D 1-acylglycerol-3-phosphate o-acyltransferase YhdO; hypothetical protein 956874..957473 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462257 YP_001420573.1 CDS yhdP NC_009725.1 957519 958853 R conserved hypothetical protein YhdP; TlyC family hemolysin complement(957519..958853) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462258 YP_001420574.1 CDS cueR NC_009725.1 958915 959340 R HTH-type transcriptional regulator CueR; CueR complement(958915..959340) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462259 YP_001420575.1 CDS yhdR NC_009725.1 959520 960704 D catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 959520..960704 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460699 YP_001420576.1 CDS RBAM_009810 NC_009725.1 960737 961981 D involved in polyketide production; polyketide beta-ketoacyl:acyl carrier protein synthase 960737..961981 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460700 YP_001420577.1 CDS yhdT NC_009725.1 962211 963599 D hemolysin YhdT; hypothetical protein 962211..963599 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460701 YP_001420578.1 CDS yhdU NC_009725.1 963613 963972 R may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB complement(963613..963972) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460702 YP_001420579.1 CDS yhdV NC_009725.1 963969 964364 R conserved hypothetical protein YhdV; hypothetical protein complement(963969..964364) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460703 YP_001420580.1 CDS yhdW NC_009725.1 964366 965082 R glycerophosphodiester phosphodiesterase YhdW; hypothetical protein complement(964366..965082) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460704 YP_001420581.1 CDS yhdX NC_009725.1 965252 965356 D hypothetical protein YhdX; hypothetical protein 965252..965356 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459720 YP_001420582.1 CDS yhdY NC_009725.1 965519 966634 D conserved hypothetical protein YhdY; hypothetical protein 965519..966634 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459721 YP_001420583.1 CDS npdA NC_009725.1 966686 967429 D Modulates the activities of several enzymes which are inactive in their acetylated form; NAD-dependent deacetylase 966686..967429 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459722 YP_001420584.1 CDS yheN NC_009725.1 967463 968311 R conserved hypothetical protein YheN; hypothetical protein complement(967463..968311) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459723 YP_001420585.1 CDS dat NC_009725.1 968568 969419 D D-alanine aminotransferase Dat; Dat 968568..969419 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459724 YP_001420586.1 CDS pksA NC_009725.1 969461 970045 R HTH-type transcriptional regulator PksA; PksA complement(969461..970045) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459725 YP_001420587.1 CDS ymcC NC_009725.1 970154 970705 D hypothetical protein YmcC; hypothetical protein 970154..970705 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460520 YP_001420588.1 CDS nhaX NC_009725.1 970744 971313 R stress response protein NhaX; NhaX complement(970744..971313) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460521 YP_001420589.1 CDS yheI NC_009725.1 971666 973423 D ABC transporter (ATP-binding protein) YheI; hypothetical protein 971666..973423 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460522 YP_001420590.1 CDS yheH NC_009725.1 973420 975441 D ABC transporter (ATP-binding protein) YheH; hypothetical protein 973420..975441 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460523 YP_001420591.1 CDS yheG NC_009725.1 975481 976101 R conserved hypothetical protein YheG; hypothetical protein complement(975481..976101) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460524 YP_001420592.1 CDS yheF NC_009725.1 976130 976255 R hypothetical protein YheF; hypothetical protein complement(976130..976255) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460525 YP_001420593.1 CDS sspB NC_009725.1 976357 976563 R small acid-soluble spore protein (beta-type SASP) SspB; SspB complement(976357..976563) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461129 YP_001420594.1 CDS yheE NC_009725.1 976788 977003 R hypothetical protein YheE; hypothetical protein complement(976788..977003) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461130 YP_001420595.1 CDS yheD NC_009725.1 977086 978444 R hypothetical protein YheD; hypothetical protein complement(977086..978444) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461131 YP_001420596.1 CDS yheC NC_009725.1 978434 979525 R hypothetical protein YheC; hypothetical protein complement(978434..979525) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461132 YP_001420597.1 CDS yheB NC_009725.1 979763 980896 D conserved hypothetical protein YheB; hypothetical protein 979763..980896 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461133 YP_001420598.1 CDS yheA NC_009725.1 980982 981332 D conserved hypothetical protein YheA; hypothetical protein 980982..981332 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461134 YP_001420599.1 CDS yhaZ NC_009725.1 981371 982444 R conserved hypothetical protein YhaZ; hypothetical protein complement(981371..982444) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459563 YP_001420600.1 CDS yhaY NC_009725.1 982630 982851 R hypothetical protein YhaY; hypothetical protein complement(982630..982851) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459564 YP_001420601.1 CDS yhaX NC_009725.1 982894 983760 D stress response protein YhaX; hypothetical protein 982894..983760 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459565 YP_001420602.1 CDS hemZ NC_009725.1 983873 985375 D catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 983873..985375 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459566 YP_001420603.1 CDS RBAM_010080 NC_009725.1 985468 986766 D lysine/ornithine N-monooxygenase 985468..986766 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459567 YP_001420604.1 CDS yhaU NC_009725.1 986792 988006 R Na+/H+ antiporter YhaU; hypothetical protein complement(986792..988006) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459568 YP_001420605.1 CDS yhaT NC_009725.1 988014 988511 R conserved hypothetical protein YhaT; hypothetical protein complement(988014..988511) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460842 YP_001420606.1 CDS yhaS NC_009725.1 988539 988892 R hypothetical protein YhaS; hypothetical protein complement(988539..988892) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460843 YP_001420607.1 CDS yhaR NC_009725.1 989077 989844 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 989077..989844 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460844 YP_001420608.1 CDS yhaQ NC_009725.1 990160 991056 D ABC transporter (ATP-binding protein) YhaQ; hypothetical protein 990160..991056 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460845 YP_001420609.1 CDS yhaP NC_009725.1 991049 992308 D conserved hypothetical protein YhaP; hypothetical protein 991049..992308 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460846 YP_001420610.1 CDS yhaO NC_009725.1 992419 993642 D hypothetical protein YhaO; hypothetical protein 992419..993642 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460847 YP_001420611.1 CDS yhaN NC_009725.1 993639 996521 D conserved hypothetical protein YhaN; hypothetical protein 993639..996521 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461218 YP_001420612.1 CDS yhaM NC_009725.1 996595 997539 D catalyzes the exonucleic cleavage of mRNA yielding nucleioside 5'-phosphates; 3'-5' exoribonuclease 996595..997539 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461219 YP_001420613.1 CDS yhaL NC_009725.1 997654 997881 D hypothetical protein YhaL; hypothetical protein 997654..997881 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461220 YP_001420614.1 CDS prsA NC_009725.1 997920 998771 R foldase protein prsA precursor PrsA; hypothetical protein complement(997920..998771) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461221 YP_001420615.1 CDS RBAM_010200 NC_009725.1 999284 999502 R hypothetical protein complement(999284..999502) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461222 YP_001420616.1 CDS yhaK NC_009725.1 999563 1000093 R conserved hypothetical protein YhaK; hypothetical protein complement(999563..1000093) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461223 YP_001420617.1 CDS yhaI NC_009725.1 1000304 1000645 D hypothetical protein YhaI; hypothetical protein 1000304..1000645 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459923 YP_001420618.1 CDS hpr NC_009725.1 1000642 1001253 R hpr; ScoC; MarR family; protease production regulatory protein; transcriptional regulator Hpr complement(1000642..1001253) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459924 YP_001420619.1 CDS yhaH NC_009725.1 1001434 1001790 R hypothetical protein YhaH; hypothetical protein complement(1001434..1001790) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459925 YP_001420620.1 CDS yhaG NC_009725.1 1002157 1002675 R hypothetical protein YhaG; hypothetical protein complement(1002157..1002675) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459926 YP_001420621.1 CDS serC NC_009725.1 1002796 1003875 R catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase complement(1002796..1003875) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459927 YP_001420622.1 CDS hit NC_009725.1 1004011 1004448 R cell-cycle regulation histidine triad (HIT) protein Hit; hypothetical protein complement(1004011..1004448) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459928 YP_001420623.1 CDS ecsA NC_009725.1 1004939 1005682 D ABC-type transporter ATP-binding protein; protein secretion to extracellular matrix; EcsA 1004939..1005682 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462088 YP_001420624.1 CDS ecsB NC_009725.1 1005675 1006901 D ABC-type transporter;secretion to extracellular matrix; EcsB 1005675..1006901 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462089 YP_001420625.1 CDS ecsC NC_009725.1 1006944 1007648 D ABC-type transporter; protein secretion to extracellular matrix; EcsC 1006944..1007648 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462090 YP_001420626.1 CDS yhaA NC_009725.1 1007671 1008858 R aminoacylase YhaA; hypothetical protein complement(1007671..1008858) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462091 YP_001420627.1 CDS yhfA NC_009725.1 1008928 1010313 R hypothetical protein YhfA; hypothetical protein complement(1008928..1010313) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462092 YP_001420628.1 CDS yhgC NC_009725.1 1010431 1010931 R hypothetical protein YhgC; hypothetical protein complement(1010431..1010931) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462093 YP_001420629.1 CDS pbpF NC_009725.1 1011054 1013195 D penicillin-binding protein 2C PbpF; PbpF 1011054..1013195 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461428 YP_001420630.1 CDS hemE NC_009725.1 1013319 1014380 D catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 1013319..1014380 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461429 YP_001420631.1 CDS hemH NC_009725.1 1014456 1015391 D protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 1014456..1015391 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461430 YP_001420632.1 CDS hemY NC_009725.1 1015419 1016852 D catalyzes the formation of protoporphyrin IX from protoporphyrinogen IX; protoporphyrinogen oxidase 1015419..1016852 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461431 YP_001420633.1 CDS yhgD NC_009725.1 1017001 1017573 D HTH-type transcriptional regulator YhgD; hypothetical protein 1017001..1017573 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461432 YP_001420634.1 CDS yhgE NC_009725.1 1017648 1019981 D conserved hypothetical protein YhgE; hypothetical protein 1017648..1019981 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461433 YP_001420635.1 CDS fabHB NC_009725.1 1020043 1021020 R FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; in Pseudomonas this protein is involved in quinolone signal biosynthesis; 3-oxoacyl-ACP synthase complement(1020043..1021020) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461389 YP_001420636.1 CDS yhfE NC_009725.1 1021502 1022542 D glucanase/aminopeptidase; hypothetical protein 1021502..1022542 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461390 YP_001420637.1 CDS gltT NC_009725.1 1022583 1023872 R proton/sodium-glutamate symport protein GltT; GltT complement(1022583..1023872) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461391 YP_001420638.1 CDS yhfH NC_009725.1 1024107 1024247 R hypothetical protein YhfH; hypothetical protein complement(1024107..1024247) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461392 YP_001420639.1 CDS yhfI NC_009725.1 1024399 1025133 D conserved hypothetical protein YhfI; hypothetical protein 1024399..1025133 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461393 YP_001420640.1 CDS yhfJ NC_009725.1 1025146 1026141 D lipoate-protein ligase YhfJ; hypothetical protein 1025146..1026141 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461394 YP_001420641.1 CDS yhfK NC_009725.1 1026219 1026866 D hypothetical protein YhfK; hypothetical protein 1026219..1026866 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463254 YP_001420642.1 CDS yhfL NC_009725.1 1026999 1028540 D activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 1026999..1028540 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463255 YP_001420643.1 CDS yhfM NC_009725.1 1028588 1028983 R hypothetical protein YhfM; hypothetical protein complement(1028588..1028983) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463256 YP_001420644.1 CDS yhfN NC_009725.1 1029138 1030388 D conserved hypothetical protein YhfN; hypothetical protein 1029138..1030388 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463257 YP_001420645.1 CDS aprE NC_009725.1 1030434 1031582 R serine alkaline protease (subtilisin E) AprE; hypothetical protein complement(1030434..1031582) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463258 YP_001420646.1 CDS yhfQ NC_009725.1 1032072 1032950 D conserved hypothetical protein YhfQ; hypothetical protein 1032072..1032950 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463259 YP_001420647.1 CDS yhfR NC_009725.1 1032966 1033541 R 2,3-diphosphoglycerate-dependent phosphoglycerate mutase YhfR; hypothetical protein complement(1032966..1033541) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462694 YP_001420648.1 CDS yhfS NC_009725.1 1033592 1034683 R Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase complement(1033592..1034683) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462695 YP_001420649.1 CDS yhfT NC_009725.1 1034671 1036107 R activates fatty acids by binding to coenzyme A; acyl-CoA synthetase complement(1034671..1036107) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462696 YP_001420650.1 CDS yhfU NC_009725.1 1036119 1036676 R biotin biosynthesis protein YhfU; hypothetical protein complement(1036119..1036676) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462697 YP_001420651.1 CDS hemAT NC_009725.1 1036807 1038099 R haem-based aerotactic transducer HemAT; HemAT complement(1036807..1038099) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462698 YP_001420652.1 CDS yhfW NC_009725.1 1038222 1039745 R Rieske [2Fe-2S] iron-sulfur protein YhfW; hypothetical protein complement(1038222..1039745) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462699 YP_001420653.1 CDS yhxC NC_009725.1 1039870 1040727 D alcohol dehydrogenase YhxC; hypothetical protein 1039870..1040727 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461034 YP_001420654.1 CDS yhzC NC_009725.1 1040758 1040991 R hypothetical protein YhzC; hypothetical protein complement(1040758..1040991) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461035 YP_001420655.1 CDS comK NC_009725.1 1041306 1041884 D competence transcription factor (CTF) ComK; ComK 1041306..1041884 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461036 YP_001420656.1 CDS RBAM_010610 NC_009725.1 1042030 1042398 D hypothetical protein 1042030..1042398 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461037 YP_001420657.1 CDS RBAM_010620 NC_009725.1 1042425 1042796 D hypothetical protein 1042425..1042796 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461038 YP_001420658.1 CDS RBAM_010630 NC_009725.1 1042919 1043428 D hypothetical protein 1042919..1043428 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461039 YP_001420659.1 CDS yrpD NC_009725.1 1043657 1044370 R hypothetical protein YrpD; hypothetical protein complement(1043657..1044370) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462177 YP_001420660.1 CDS yhjA NC_009725.1 1044563 1044832 D hypothetical protein YhjA; hypothetical protein 1044563..1044832 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462178 YP_001420661.1 CDS RBAM_010660 NC_009725.1 1044847 1045182 R hypothetical protein complement(1044847..1045182) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462179 YP_001420662.1 CDS yhjB NC_009725.1 1045224 1046693 R metabolite permease YhjB; hypothetical protein complement(1045224..1046693) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462180 YP_001420663.1 CDS yhjC NC_009725.1 1046690 1046890 R conserved hypothetical protein YhjC; hypothetical protein complement(1046690..1046890) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462181 YP_001420664.1 CDS yhjD NC_009725.1 1047011 1047370 R hypothetical protein YhjD; hypothetical protein complement(1047011..1047370) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462182 YP_001420665.1 CDS yhjE NC_009725.1 1047523 1048149 D conserved hypothetical protein YhjE; hypothetical protein 1047523..1048149 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460251 YP_001420666.1 CDS sipV NC_009725.1 1048146 1048661 D type I signal peptidase SipV; SipV 1048146..1048661 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460252 YP_001420667.1 CDS yhjG NC_009725.1 1048809 1050287 D monooxygenase YhjG; hypothetical protein 1048809..1050287 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460253 YP_001420668.1 CDS yhjH NC_009725.1 1050376 1050897 D conserved hypothetical protein YhjH; hypothetical protein 1050376..1050897 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460254 YP_001420669.1 CDS yhjN NC_009725.1 1050934 1052091 R conserved hypothetical protein YhjN; hypothetical protein complement(1050934..1052091) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460255 YP_001420670.1 CDS blt NC_009725.1 1052259 1053455 R multidrug resistance protein II Blt; major facilitator transporter complement(1052259..1053455) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460256 YP_001420671.1 CDS RBAM_010760 NC_009725.1 1053471 1054091 R hypothetical protein complement(1053471..1054091) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461534 YP_001420672.1 CDS yhjR NC_009725.1 1054342 1054851 R conserved hypothetical protein YhjR; hypothetical protein complement(1054342..1054851) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461535 YP_001420673.1 CDS ydfS NC_009725.1 1054920 1055633 R conserved membrane protein YdfS; hypothetical protein complement(1054920..1055633) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461536 YP_001420674.1 CDS addB NC_009725.1 1055773 1059273 D ATP-dependent deoxyribonuclease (subunit B) AddB; hypothetical protein 1055773..1059273 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461537 YP_001420675.1 CDS addA NC_009725.1 1059257 1062964 D ATP-dependent deoxyribonuclease (subunit A) AddA; AddA 1059257..1062964 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461538 YP_001420676.1 CDS sbcD NC_009725.1 1063029 1064201 D exonuclease SbcD; hypothetical protein 1063029..1064201 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461539 YP_001420677.1 CDS yirY NC_009725.1 1064198 1067590 D DNA exonuclease YirY; hypothetical protein 1064198..1067590 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462583 YP_001420678.1 CDS yisB NC_009725.1 1067606 1067899 D hypothetical protein YisB; hypothetical protein 1067606..1067899 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462584 YP_001420679.1 CDS gerPF NC_009725.1 1067943 1068161 R spore germination protein GerPF; GerPF complement(1067943..1068161) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462585 YP_001420680.1 CDS gerPE NC_009725.1 1068201 1068596 R spore germination protein GerPE; GerPE complement(1068201..1068596) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462586 YP_001420681.1 CDS gerPD NC_009725.1 1068596 1068772 R spore germination protein GerPD; GerPD complement(1068596..1068772) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462587 YP_001420682.1 CDS gerPC NC_009725.1 1068769 1069386 R spore germination protein GerPC; GerPC complement(1068769..1069386) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462588 YP_001420683.1 CDS gerPB NC_009725.1 1069422 1069658 R spore germination protein GerPB; GerPB complement(1069422..1069658) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460608 YP_001420684.1 CDS gerPA NC_009725.1 1069671 1069892 R spore germination protein GerPA; GerPA complement(1069671..1069892) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460609 YP_001420685.1 CDS yisI NC_009725.1 1070082 1070297 R hypothetical protein YisI; hypothetical protein complement(1070082..1070297) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460610 YP_001420686.1 CDS yisK NC_009725.1 1070515 1071420 D 5-oxo-1,2,5-tricarboxilic-3-penten aciddecarboxylase YisK; hypothetical protein 1070515..1071420 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460611 YP_001420687.1 CDS yisL NC_009725.1 1071514 1071870 D conserved hypothetical protein YisL; hypothetical protein 1071514..1071870 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460612 YP_001420688.1 CDS RBAM_010930 NC_009725.1 1071867 1072100 R hypothetical protein complement(1071867..1072100) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460613 YP_001420689.1 CDS yisN NC_009725.1 1072136 1072726 R conserved hypothetical protein YisN; hypothetical protein complement(1072136..1072726) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461813 YP_001420690.1 CDS asnO NC_009725.1 1072854 1074695 D asparagine synthetase [glutamine-hydrolyzing] III AsnO; AsnO 1072854..1074695 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461814 YP_001420691.1 CDS yisP NC_009725.1 1074781 1075521 D phytoene synthase YisP; hypothetical protein 1074781..1075521 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461815 YP_001420692.1 CDS yisQ NC_009725.1 1075557 1076924 R conserved hypothetical protein YisQ; hypothetical protein complement(1075557..1076924) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461816 YP_001420693.1 CDS yisR NC_009725.1 1077047 1077910 D HTH-type transcriptional regulator YisR; hypothetical protein 1077047..1077910 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461817 YP_001420694.1 CDS yisT NC_009725.1 1078053 1078547 R nuclease inhibitor YisT; hypothetical protein complement(1078053..1078547) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461818 YP_001420695.1 CDS yisX NC_009725.1 1078701 1079327 R conserved hypothetical protein YisX; hypothetical protein complement(1078701..1079327) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461630 YP_001420696.1 CDS yitI NC_009725.1 1079524 1079964 R hypothetical protein YitI; hypothetical protein complement(1079524..1079964) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461631 YP_001420697.1 CDS yitJ NC_009725.1 1080047 1081888 R catalyzes the formation of 5,10-methylenetetrahydrofolate from 5-methyltetrahydrofolate and S-adenosyl-L-homocysteine and methionine from S-adenosyl-L-methionine and L-homocysteine; expressed in B. subtilis under methionine starvation conditions; bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein complement(1080047..1081888) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461632 YP_001420698.1 CDS yitk NC_009725.1 1082200 1082691 R nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; nucleotide-binding protein complement(1082200..1082691) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461633 YP_001420699.1 CDS yitL NC_009725.1 1082839 1083687 D conserved hypothetical protein YitL; hypothetical protein 1082839..1083687 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461634 YP_001420700.1 CDS RBAM_011050 NC_009725.1 1083858 1084835 D hypothetical protein 1083858..1084835 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461635 YP_001420701.1 CDS RBAM_011060 NC_009725.1 1084832 1086481 D hypothetical protein 1084832..1086481 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460963 YP_001420702.1 CDS cypC NC_009725.1 1086614 1087864 D cytochrome P450 152A1 CypC; CypC 1086614..1087864 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460964 YP_001420703.1 CDS yitS NC_009725.1 1088084 1088935 R conserved hypothetical protein YitS; hypothetical protein complement(1088084..1088935) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460965 YP_001420704.1 CDS yitT NC_009725.1 1089061 1089903 D conserved hypothetical protein YitT; hypothetical protein 1089061..1089903 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460966 YP_001420705.1 CDS ipi NC_009725.1 1089918 1090379 D intracellular proteinase inhibitor Ipi; Ipi 1089918..1090379 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460967 YP_001420706.1 CDS RBAM_011110 NC_009725.1 1090416 1090613 R hypothetical protein complement(1090416..1090613) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460968 YP_001420707.1 CDS RBAM_011120 NC_009725.1 1090613 1090762 R hypothetical protein complement(1090613..1090762) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461956 YP_001420708.1 CDS yitU NC_009725.1 1090848 1091660 R conserved hypothetical protein YitU; hypothetical protein complement(1090848..1091660) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461957 YP_001420709.1 CDS yitV NC_009725.1 1091781 1092548 D conserved hypothetical protein YitV; hypothetical protein 1091781..1092548 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461958 YP_001420710.1 CDS yitW NC_009725.1 1092611 1092919 D conserved hypothetical protein YitW; hypothetical protein 1092611..1092919 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461959 YP_001420711.1 CDS fosB NC_009725.1 1093028 1093471 R catalyzes resistance to fosfomycin by the addition of a thiol cofactor; fosfomycin resistance protein FosB complement(1093028..1093471) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461960 YP_001420712.1 CDS yitY NC_009725.1 1093793 1095229 D oxidoreductase YitY; hypothetical protein 1093793..1095229 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461961 YP_001420713.1 CDS yitZ NC_009725.1 1095226 1095768 D multidrug resistance protein YitZ; hypothetical protein 1095226..1095768 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462904 YP_001420714.1 CDS argC NC_009725.1 1095933 1096970 D catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase 1095933..1096970 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462905 YP_001420715.1 CDS argJ NC_009725.1 1096993 1098210 D bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein 1096993..1098210 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462906 YP_001420716.1 CDS argB NC_009725.1 1098225 1099001 D catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 1098225..1099001 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462907 YP_001420717.1 CDS argD NC_009725.1 1098998 1100155 D acetylornithine aminotransferase ArgD; acetylornithine aminotransferase 1098998..1100155 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462908 YP_001420718.1 CDS carA NC_009725.1 1100225 1101283 D catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 1100225..1101283 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462909 YP_001420719.1 CDS carB NC_009725.1 1101276 1104371 D four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 1101276..1104371 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460562 YP_001420720.1 CDS argF NC_009725.1 1104359 1105330 D catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 1104359..1105330 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460563 YP_001420721.1 CDS yjzC NC_009725.1 1105406 1105585 D hypothetical protein YjzC; hypothetical protein 1105406..1105585 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460564 YP_001420722.1 CDS yjzD NC_009725.1 1105622 1105807 R hypothetical protein YjzD; hypothetical protein complement(1105622..1105807) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460565 YP_001420723.1 CDS yjaU NC_009725.1 1106068 1106802 D hypothetical protein YjaU; hypothetical protein 1106068..1106802 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460566 YP_001420724.1 CDS yjaV NC_009725.1 1106885 1107451 D hypothetical protein YjaV; hypothetical protein 1106885..1107451 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460567 YP_001420725.1 CDS med NC_009725.1 1107541 1108494 D transcriptional activator protein med precursor Med; hypothetical protein 1107541..1108494 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462757 YP_001420726.1 CDS comZ NC_009725.1 1108507 1108698 D comG operon repressor ComZ; ComZ 1108507..1108698 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462758 YP_001420727.1 CDS yjzB NC_009725.1 1108727 1108945 R hypothetical protein YjzB; hypothetical protein complement(1108727..1108945) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462759 YP_001420728.1 CDS fabHA NC_009725.1 1109112 1110050 D FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 1109112..1110050 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462760 YP_001420729.1 CDS fabF NC_009725.1 1110073 1111311 D FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase 1110073..1111311 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462761 YP_001420730.1 CDS yjaZ NC_009725.1 1111395 1112180 D conserved hypothetical protein YjaZ; hypothetical protein 1111395..1112180 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462762 YP_001420731.1 CDS appD NC_009725.1 1112354 1113340 D oligopeptide transport ATP-binding protein AppD; AppD 1112354..1113340 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459946 YP_001420732.1 CDS appF NC_009725.1 1113337 1114326 D oligopeptide transport ATP-binding protein AppF; AppF 1113337..1114326 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459947 YP_001420733.1 CDS appA NC_009725.1 1114404 1116032 D oligopeptide-binding protein AppA precursor; AppA 1114404..1116032 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459948 YP_001420734.1 CDS appB NC_009725.1 1116099 1117049 D oligopeptide transport system permease protein AppB; AppB 1116099..1117049 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459949 YP_001420735.1 CDS appC NC_009725.1 1117071 1117985 D oligopeptide transport system permease protein AppC; AppC 1117071..1117985 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459950 YP_001420736.1 CDS yjbA NC_009725.1 1118133 1118885 D hypothetical protein YjbA; hypothetical protein 1118133..1118885 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459951 YP_001420737.1 CDS trpS NC_009725.1 1118918 1119910 R catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase complement(1118918..1119910) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460946 YP_001420738.1 CDS oppA NC_009725.1 1120654 1122288 D oligopeptide ABC transporter (binding protein) OppA; hypothetical protein 1120654..1122288 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460947 YP_001420739.1 CDS oppB NC_009725.1 1122395 1123330 D oligopeptide ABC transporter (permease) OppB; hypothetical protein 1122395..1123330 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460948 YP_001420740.1 CDS oppC NC_009725.1 1123334 1124251 D oligopeptide ABC transporter (permease) OppC; hypothetical protein 1123334..1124251 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460949 YP_001420741.1 CDS oppD NC_009725.1 1124264 1125340 D oligopeptide ABC transporter (ATP-binding protein) OppD; OppD 1124264..1125340 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460950 YP_001420742.1 CDS oppF NC_009725.1 1125333 1126250 D oligopeptide ABC transporter (ATP-binding protein) OppF; hypothetical protein 1125333..1126250 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460951 YP_001420743.1 CDS RBAM_011480 NC_009725.1 1126357 1127553 D hypothetical protein 1126357..1127553 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461950 YP_001420744.1 CDS yjbC NC_009725.1 1127662 1128240 D hypothetical protein YjbC; hypothetical protein 1127662..1128240 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461951 YP_001420745.1 CDS spxA NC_009725.1 1128419 1128814 D the anti-alpha factor Spx interacts with RNA polymerase alpha subunit C-terminal domain in a region that interacts with the sigma 70 subunit and may interfere with activation of promoters; in Bacillus subtilis this protein is a substrate for ClpXP protease; blocks transcription of the competence regulatory gene encoded by the srf operon; regulates a number of genes involved in thiol homeostasis including trxA and trxB; monomeric member of ArsC family of proteins; does not bind DNA; contains a disulfide bond between C10 and C13 which may sense disulfide stress; transcriptional regulator Spx 1128419..1128814 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461952 YP_001420746.1 CDS yjbE NC_009725.1 1128872 1129528 R conserved hypothetical protein YjbE; hypothetical protein complement(1128872..1129528) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461953 YP_001420747.1 CDS mecA NC_009725.1 1129804 1130460 D enables recognition and targeting of proteins for proteolysis, involved in negative regulation of competence; adaptor protein 1129804..1130460 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461954 YP_001420748.1 CDS yjbF NC_009725.1 1130611 1131771 D conserved hypothetical protein YjbF; hypothetical protein 1130611..1131771 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461955 YP_001420749.1 CDS yjbG NC_009725.1 1131999 1133828 D oligopeptidase F YjbG; hypothetical protein 1131999..1133828 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460969 YP_001420750.1 CDS RBAM_011550 NC_009725.1 1133866 1134033 R hypothetical protein complement(1133866..1134033) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460970 YP_001420751.1 CDS yjbH NC_009725.1 1134319 1135221 R conserved hypothetical protein YjbH; hypothetical protein complement(1134319..1135221) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460971 YP_001420752.1 CDS yjbI NC_009725.1 1135218 1135616 R conserved hypothetical protein YjbI; hypothetical protein complement(1135218..1135616) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460972 YP_001420753.1 CDS yjbJ NC_009725.1 1135845 1136531 R lytic transglycosylase YjbJ; hypothetical protein complement(1135845..1136531) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460973 YP_001420754.1 CDS yjbK NC_009725.1 1136536 1137108 R conserved hypothetical protein YjbK; hypothetical protein complement(1136536..1137108) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460974 YP_001420755.1 CDS yjbL NC_009725.1 1137233 1137598 D hypothetical protein YjbL; hypothetical protein 1137233..1137598 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459889 YP_001420756.1 CDS yjbM NC_009725.1 1137786 1138262 D GTP pyrophosphokinase YjbM; hypothetical protein 1137786..1138262 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459890 YP_001420757.1 CDS ppnK NC_009725.1 1138280 1139080 D catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase 1138280..1139080 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459891 YP_001420758.1 CDS yjbO NC_009725.1 1139095 1139988 D pseudouridine synthase YjbO; hypothetical protein 1139095..1139988 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459892 YP_001420759.1 CDS yjbP NC_009725.1 1140022 1140771 R asymmetrical; catalyzes the formation of NTP and NMP from P(1),P(4)-bis(5'-nucleosyl) tetraphosphate; acts on bis(5'-guanosyl) tetraphosphate, bis(5'-xanthosyl)-tetraphosphate, on bis(5'-adenosyl)-tetraphosphate, and bis(5'-uridyl)-tetraphosphate; bis(5'-nucleosyl)-tetraphosphatase PrpE complement(1140022..1140771) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459893 YP_001420760.1 CDS yjbQ NC_009725.1 1141000 1142844 D Na+/H+ antiporter YjbQ; hypothetical protein 1141000..1142844 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459894 YP_001420761.1 CDS tenA NC_009725.1 1143091 1143801 D transcriptional activator TenA; TenA 1143091..1143801 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462514 YP_001420762.1 CDS tenI NC_009725.1 1143779 1144396 D regulates the production of extracellular enzymes; transcriptional regulator TenI 1143779..1144396 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462515 YP_001420763.1 CDS goxB NC_009725.1 1144380 1145489 D glycine oxidase GoxB; GoxB 1144380..1145489 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462516 YP_001420764.1 CDS thiS NC_009725.1 1145486 1145689 D hydroxyethylthiazole phosphate biosynthesis (thiamine biosynthesis) ThiS; hypothetical protein 1145486..1145689 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462517 YP_001420765.1 CDS thiG NC_009725.1 1145692 1146456 D functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase 1145692..1146456 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462518 YP_001420766.1 CDS thiF NC_009725.1 1146453 1147463 D catalyzes the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD or ThiS in the molybdopterin or thiamin pyrophosphate biosynthesis pathways; thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein 1146453..1147463 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462519 YP_001420767.1 CDS yjbV NC_009725.1 1147486 1148298 D catalyzes the formation of 4-amino-2-methyl-5-diphosphomethylpyrimidine; phosphomethylpyrimidine kinase 1147486..1148298 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460162 YP_001420768.1 CDS fabI NC_009725.1 1148429 1149205 D Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-(acyl carrier protein) reductase 1148429..1149205 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460163 YP_001420769.1 CDS yjbX NC_009725.1 1149303 1149911 D hypothetical protein YjbX; hypothetical protein 1149303..1149911 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460164 YP_001420770.1 CDS cotZ NC_009725.1 1149970 1150413 R spore coat protein CotZ (insoluble fraction) CotZ; CotZ complement(1149970..1150413) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460165 YP_001420771.1 CDS cotY NC_009725.1 1150559 1151041 R spore coat protein CotY; CotY complement(1150559..1151041) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460166 YP_001420772.1 CDS cotX NC_009725.1 1151192 1151692 R spore coat protein (insoluble fraction) CotX; CotX complement(1151192..1151692) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460167 YP_001420773.1 CDS cotW NC_009725.1 1151784 1152095 R spore coat protein (insoluble fraction) CotW; CotW complement(1151784..1152095) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462040 YP_001420774.1 CDS cotV NC_009725.1 1152133 1152519 R spore coat protein (insoluble fraction) CotV; CotV complement(1152133..1152519) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462041 YP_001420775.1 CDS yjcA NC_009725.1 1152672 1153046 D conserved hypothetical protein YjcA; hypothetical protein 1152672..1153046 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462042 YP_001420776.1 CDS RBAM_011810 NC_009725.1 1153333 1153530 D hypothetical protein 1153333..1153530 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462043 YP_001420777.1 CDS RBAM_011820 NC_009725.1 1153622 1153783 D hypothetical protein 1153622..1153783 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462044 YP_001420778.1 CDS yjcC NC_009725.1 1153866 1154204 D hypothetical protein YjcC; hypothetical protein 1153866..1154204 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462045 YP_001420779.1 CDS yjcD NC_009725.1 1154273 1156558 R ATP-dependent DNA helicase YjcD; hypothetical protein complement(1154273..1156558) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463105 YP_001420780.1 CDS RBAM_011850 NC_009725.1 1156679 1156933 D hypothetical protein 1156679..1156933 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463106 YP_001420781.1 CDS blm NC_009725.1 1157002 1157751 D beta-lactamase II precursor (Penicillinase) (Cephalosporinase) Blm; Blm 1157002..1157751 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463107 YP_001420782.1 CDS RBAM_011870 NC_009725.1 1157792 1158514 R ABC-type multidrug transport system, permease complement(1157792..1158514) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463108 YP_001420783.1 CDS RBAM_011880 NC_009725.1 1158507 1159244 R ABC transporter ATP-binding protein complement(1158507..1159244) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463109 YP_001420784.1 CDS RBAM_011890 NC_009725.1 1159245 1159478 R abrB-like protein complement(1159245..1159478) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463110 YP_001420785.1 CDS yjcF NC_009725.1 1159637 1160068 R conserved hypothetical protein YjcF; hypothetical protein complement(1159637..1160068) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463228 YP_001420786.1 CDS yjcG NC_009725.1 1160073 1160588 R similar to 2'-5' RNA ligase; hypothetical protein complement(1160073..1160588) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463229 YP_001420787.1 CDS ycjH NC_009725.1 1160614 1161336 R conserved hypothetical protein YcjH; hypothetical protein complement(1160614..1161336) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463230 YP_001420788.1 CDS yjcI NC_009725.1 1161706 1162827 D catalyzes the formation of cysteine from cystathionine; in B. subtilis also has O-acetylhomoserine thiolyase activity; cystathionine gamma-synthase 1161706..1162827 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463231 YP_001420789.1 CDS yjcJ NC_009725.1 1162820 1163995 D catalyzes the formation of L-homocysteine from cystathionine; cystathionine beta-lyase 1162820..1163995 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463232 YP_001420790.1 CDS RBAM_011960 NC_009725.1 1164792 1165289 R hypothetical protein complement(1164792..1165289) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461053 YP_001420791.1 CDS yokI NC_009725.1 1165318 1166676 R similar to Bacillus subtilis skin element YokI; hypothetical protein complement(1165318..1166676) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461054 YP_001420792.1 CDS RBAM_011980 NC_009725.1 1166931 1167185 R hypothetical protein complement(1166931..1167185) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461055 YP_001420793.1 CDS RBAM_011990 NC_009725.1 1167536 1168522 D hypothetical protein 1167536..1168522 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461056 YP_001420794.1 CDS RBAM_012000 NC_009725.1 1168606 1169361 D hypothetical protein 1168606..1169361 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461057 YP_001420795.1 CDS RBAM_012010 NC_009725.1 1170419 1170754 R hypothetical protein complement(1170419..1170754) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459929 YP_001420796.1 CDS yqcG NC_009725.1 1170776 1172614 R bacillus subtilis skin element like protein YqcG[bacteriophage SPBc2]; hypothetical protein complement(1170776..1172614) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459930 YP_001420797.1 CDS RBAM_012030 NC_009725.1 1173175 1173723 D hypothetical protein 1173175..1173723 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459931 YP_001420798.1 CDS RBAM_012040 NC_009725.1 1173772 1174002 D hypothetical protein 1173772..1174002 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459932 YP_001420799.1 CDS RBAM_012050 NC_009725.1 1174045 1174218 D hypothetical protein 1174045..1174218 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459933 YP_001420800.1 CDS RBAM_012060 NC_009725.1 1174249 1174947 D hypothetical protein 1174249..1174947 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459934 YP_001420801.1 CDS RBAM_012070 NC_009725.1 1175652 1176014 D hypothetical protein 1175652..1176014 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460862 YP_001420802.1 CDS penP NC_009725.1 1176362 1177276 D beta-lactamase precursor PenP; PenP 1176362..1177276 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460863 YP_001420803.1 CDS yjcS NC_009725.1 1177377 1177679 D conserved hypothetical protein YjcS; hypothetical protein 1177377..1177679 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460864 YP_001420804.1 CDS yfjF NC_009725.1 1177779 1179191 R membrane-bound transport protein YfjF; hypothetical protein complement(1177779..1179191) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460865 YP_001420805.1 CDS RBAM_012110 NC_009725.1 1179334 1179807 R MarR family transcriptional regulator complement(1179334..1179807) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460866 YP_001420806.1 CDS ganA NC_009725.1 1180093 1181205 R predicted arabinogalactan endo-1,4-beta-galactosidase; GanA complement(1180093..1181205) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460867 YP_001420807.1 CDS galT1 NC_009725.1 1181257 1182756 R catalyzes the formation of alpha-D-glucose 1-phosphate and UDP-galactose from UDP-glucose and alpha-D-galactose 1-phosphate in galactose metabolism; galactose-1-phosphate uridylyltransferase complement(1181257..1182756) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463007 YP_001420808.1 CDS galE1 NC_009725.1 1182758 1183750 R UDP-glucose 4-epimerase; GalE1 complement(1182758..1183750) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463008 YP_001420809.1 CDS galK1 NC_009725.1 1183754 1184923 R galactokinase; GalK1 complement(1183754..1184923) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463009 YP_001420810.1 CDS lacE NC_009725.1 1184939 1186636 R phosphotransferase system (PTS) lichenan-specific enzyme IIA component; LacE complement(1184939..1186636) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463010 YP_001420811.1 CDS lacF NC_009725.1 1186648 1186962 R phosphotransferase system cellobiose-specific component IIBC; LacF complement(1186648..1186962) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463011 YP_001420812.1 CDS lacG NC_009725.1 1187026 1188426 R catalyzes the formation of 6-phospho-galactose from a 6-phospho-beta-galactoside; 6-phospho-beta-galactosidase complement(1187026..1188426) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463012 YP_001420813.1 CDS lacR NC_009725.1 1188679 1189440 D COG1349; lactose phosphotransferase system repressor protein; LacR 1188679..1189440 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460526 YP_001420814.1 CDS pgm NC_009725.1 1189458 1190141 D COG0637; predicted phosphatase/phosphohexomutase; Pgm 1189458..1190141 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460527 YP_001420815.1 CDS RBAM_012210 NC_009725.1 1190449 1191639 D hypothetical protein 1190449..1191639 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460528 YP_001420816.1 CDS RBAM_012220 NC_009725.1 1191882 1192214 R hypothetical protein complement(1191882..1192214) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460529 YP_001420817.1 CDS RBAM_012230 NC_009725.1 1192317 1192952 D hypothetical protein 1192317..1192952 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460530 YP_001420818.1 CDS yjfB NC_009725.1 1193293 1193466 R hypothetical protein YjfB; hypothetical protein complement(1193293..1193466) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460531 YP_001420819.1 CDS yjgA NC_009725.1 1193510 1193911 R hypothetical protein YjgA; hypothetical protein complement(1193510..1193911) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461653 YP_001420820.1 CDS yjgB NC_009725.1 1194009 1194578 R hypothetical protein YjgB; hypothetical protein complement(1194009..1194578) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461654 YP_001420821.1 CDS yjgC NC_009725.1 1194670 1197660 D formate dehydrogenase alpha subunit YjgC; hypothetical protein 1194670..1197660 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461655 YP_001420822.1 CDS yjgD NC_009725.1 1197653 1198195 D conserved hypothetical protein YjgD; hypothetical protein 1197653..1198195 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461656 YP_001420823.1 CDS yjiB NC_009725.1 1198403 1199620 D cytochrome P450 YjiB; hypothetical protein 1198403..1199620 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461657 YP_001420824.1 CDS yjiC NC_009725.1 1199617 1200804 D macrolide glycosyltransferase YjiC; hypothetical protein 1199617..1200804 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461658 YP_001420825.1 CDS hemD NC_009725.1 1201208 1202026 D catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; functions in tetrapyrrole and heme biosynthesis; uroporphyrinogen-III synthase 1201208..1202026 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463050 YP_001420826.1 CDS yjkA NC_009725.1 1202052 1202813 R conserved hypothetical protein YjkA; hypothetical protein complement(1202052..1202813) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463051 YP_001420827.1 CDS yjkB NC_009725.1 1202815 1203564 R amino acid ABC transporter (ATP-binding protein) YjkB; hypothetical protein complement(1202815..1203564) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463052 YP_001420828.1 CDS yjlA NC_009725.1 1203579 1204562 R hypothetical protein YjlA; hypothetical protein complement(1203579..1204562) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463053 YP_001420829.1 CDS yjlB NC_009725.1 1204692 1205189 D conserved hypothetical protein YjlB; hypothetical protein 1204692..1205189 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463054 YP_001420830.1 CDS yjlC NC_009725.1 1205576 1205992 D conserved hypothetical protein YjlC; hypothetical protein 1205576..1205992 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463055 YP_001420831.1 CDS yjlD NC_009725.1 1206032 1207210 D NADH dehydrogenase-like protein YjlD; hypothetical protein 1206032..1207210 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461491 YP_001420832.1 CDS uxaC NC_009725.1 1207397 1208794 D catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate; functions in glucuronic and galacturonic metabolism; glucuronate isomerase 1207397..1208794 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461492 YP_001420833.1 CDS yjmB NC_009725.1 1208819 1210204 D symporter symporter YjmB; hypothetical protein 1208819..1210204 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461493 YP_001420834.1 CDS exuR NC_009725.1 1210281 1211279 D transcriptional regulator (LacI family) ExuR; ExuR 1210281..1211279 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461494 YP_001420835.1 CDS uxaB NC_009725.1 1211355 1212800 D catalyzes the formation of D-tagaturonate from D-altronate; altronate oxidoreductase 1211355..1212800 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461495 YP_001420836.1 CDS uxaA NC_009725.1 1212797 1214290 D altronate hydrolase UxaA; UxaA 1212797..1214290 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461496 YP_001420837.1 CDS yjnA NC_009725.1 1214324 1215088 R conserved hypothetical protein YjnA; hypothetical protein complement(1214324..1215088) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460168 YP_001420838.1 CDS yjoA NC_009725.1 1215233 1215700 R conserved hypothetical protein YjoA; hypothetical protein complement(1215233..1215700) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460169 YP_001420839.1 CDS rapA NC_009725.1 1215912 1217042 D response regulator aspartate phosphatase; cd00189, TPR, tetratricopeptide repeat domain; prevents sporulation by dephosphorylating Spo0F-P (and thus the phosphorelay); RapA 1215912..1217042 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460170 YP_001420840.1 CDS phrA NC_009725.1 1217032 1217166 D quorum sensing peptide; phosphatase rapA inhibitor; PhrA 1217032..1217166 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460171 YP_001420841.1 CDS xlyB NC_009725.1 1217309 1218262 D N-acetylmuramoyl-L-alanine amidase XlyB; XlyB 1217309..1218262 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460172 YP_001420842.1 CDS yjqA NC_009725.1 1218300 1218677 R hypothetical protein YjqA; hypothetical protein complement(1218300..1218677) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460173 YP_001420843.1 CDS yjqB NC_009725.1 1218788 1219393 D phage-related replication protein YjqB; hypothetical protein 1218788..1219393 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462231 YP_001420844.1 CDS xkdA NC_009725.1 1219512 1220102 R phage-like element PBSX protein XkdA; hypothetical protein complement(1219512..1220102) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462232 YP_001420845.1 CDS xre NC_009725.1 1220251 1220589 R transcriptional regulator of PBSX genes Xre; XRE family transcriptional regulator complement(1220251..1220589) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462233 YP_001420846.1 CDS RBAM_012520 NC_009725.1 1220780 1220959 D hypothetical protein 1220780..1220959 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462234 YP_001420847.1 CDS xkdB NC_009725.1 1221133 1221777 D PBSX prophage protein XkdB; XkdB 1221133..1221777 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462235 YP_001420848.1 CDS xkdC NC_009725.1 1221677 1222477 D PBSX prophage protein XkdC; hypothetical protein 1221677..1222477 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462236 YP_001420849.1 CDS RBAM_012550 NC_009725.1 1222477 1222644 D hypothetical protein 1222477..1222644 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461933 YP_001420850.1 CDS xkdD NC_009725.1 1222742 1223083 D PBSX prophage protein XkdD; XkdD 1222742..1223083 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461934 YP_001420851.1 CDS xtrA NC_009725.1 1223073 1223276 D phage-like element PBSX protein XtrA; XtrA 1223073..1223276 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461935 YP_001420852.1 CDS xpf NC_009725.1 1223390 1223902 D Positive regulatory protein that acts at the late promoter PL; positive control sigma-like factor 1223390..1223902 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461936 YP_001420853.1 CDS xtmA NC_009725.1 1224015 1224248 D PBSX phage terminase small subunit XtmA; XtmA 1224015..1224248 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461937 YP_001420854.1 CDS yomR NC_009725.1 1224264 1225112 D hypothetical phage related protein YomR; hypothetical protein 1224264..1225112 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461938 YP_001420855.1 CDS yomQ NC_009725.1 1225125 1225496 D hypothetical phage protein YomQ; hypothetical protein 1225125..1225496 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460750 YP_001420856.1 CDS xkdX NC_009725.1 1225501 1225698 D phage-like element PBSX protein XkdX; XkdX 1225501..1225698 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460751 YP_001420857.1 CDS xepA NC_009725.1 1225755 1226516 D phage-like element PBSX protein XepA; XepA 1225755..1226516 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460752 YP_001420858.1 CDS xhlA NC_009725.1 1226568 1226831 D phage-like element PBSX protein XhlA; XhlA 1226568..1226831 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460753 YP_001420859.1 CDS xhlB NC_009725.1 1226845 1227108 D phage lysis protein holin XhlB; XhlB 1226845..1227108 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460754 YP_001420860.1 CDS xlyA NC_009725.1 1227122 1228000 D N-acetylmuramoyl-L-alanine amidase XlyA precursor (cell wall hydrolase) (Autolysin); XlyA 1227122..1228000 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460755 YP_001420861.1 CDS spoIISB NC_009725.1 1228256 1228426 R stage II sporulation protein SB (Antidote protein) SpoIISB; SpoIISB complement(1228256..1228426) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461881 YP_001420862.1 CDS spoIISA NC_009725.1 1228427 1229173 R stage II sporulation protein SA (Killer protein) SpoIISA; SpoIISA complement(1228427..1229173) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461882 YP_001420863.1 CDS pit NC_009725.1 1229278 1230276 R low-affinity inorganic phosphate transporter Pit; Pit complement(1229278..1230276) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461883 YP_001420864.1 CDS ykaA NC_009725.1 1230289 1230906 R conserved hypothetical protein YkaA; hypothetical protein complement(1230289..1230906) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461884 YP_001420865.1 CDS ykbA NC_009725.1 1231192 1232508 R amino acid permease YkbA; hypothetical protein complement(1231192..1232508) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461885 YP_001420866.1 CDS ykcA NC_009725.1 1232831 1233781 D conserved hypothetical protein YkcA; hypothetical protein 1232831..1233781 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461886 YP_001420867.1 CDS ykcB NC_009725.1 1233965 1236106 D conserved hypothetical protein YkcB; hypothetical protein 1233965..1236106 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459741 YP_001420868.1 CDS ykcC NC_009725.1 1236118 1237089 D glycosyl transferase YkcC; hypothetical protein 1236118..1237089 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459742 YP_001420869.1 CDS htrA NC_009725.1 1237407 1238759 R serine protease do-like HtrA; hypothetical protein complement(1237407..1238759) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459743 YP_001420870.1 CDS yubD NC_009725.1 1239044 1240603 D conserved hypothetical protein YubD; hypothetical protein 1239044..1240603 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459744 YP_001420871.1 CDS dppA NC_009725.1 1240759 1241583 D D-aminopeptidase DppA; hypothetical protein 1240759..1241583 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459745 YP_001420872.1 CDS dppB NC_009725.1 1241598 1242524 D dipeptide transport system permease protein DppB; hypothetical protein 1241598..1242524 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459746 YP_001420873.1 CDS dppC NC_009725.1 1242530 1243477 D dipeptide transport system permease protein DppC; hypothetical protein 1242530..1243477 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463099 YP_001420874.1 CDS dppD NC_009725.1 1243483 1244511 D dipeptide transport ATP-binding protein DppD; hypothetical protein 1243483..1244511 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463100 YP_001420875.1 CDS dppE NC_009725.1 1244508 1246127 D dipeptide-binding protein DppE precursor; DppE 1244508..1246127 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463101 YP_001420876.1 CDS ykfA NC_009725.1 1246215 1247150 D conserved hypothetical protein YkfA; hypothetical protein 1246215..1247150 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463102 YP_001420877.1 CDS ykfB NC_009725.1 1247157 1248254 D chloromuconate cycloisomerase YkfB; hypothetical protein 1247157..1248254 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463103 YP_001420878.1 CDS ykfC NC_009725.1 1248251 1249150 D polysugar degrading enzyme YkfC; hypothetical protein 1248251..1249150 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463104 YP_001420879.1 CDS ykfD NC_009725.1 1249154 1250125 D oligopeptide ABC transporter (ATPase component)YkfD; hypothetical protein 1249154..1250125 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462850 YP_001420880.1 CDS ykgB NC_009725.1 1250153 1251202 R conserved hypothetical protein YkgB; hypothetical protein complement(1250153..1251202) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462851 YP_001420881.1 CDS ykgA NC_009725.1 1251273 1252133 R conserved hypothetical protein YkgA; hypothetical protein complement(1251273..1252133) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462852 YP_001420882.1 CDS ykhA NC_009725.1 1252323 1252841 D acyl-CoA thioester hydrolase YkhA; hypothetical protein 1252323..1252841 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462853 YP_001420883.1 CDS ykkB NC_009725.1 1252941 1253486 D conserved hypothetical protein YkkB; hypothetical protein 1252941..1253486 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462854 YP_001420884.1 CDS ykkC NC_009725.1 1253674 1254012 D Multidrug resistance protein YkkC; hypothetical protein 1253674..1254012 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462855 YP_001420885.1 CDS ykkD NC_009725.1 1254012 1254326 D Multidrug resistance protein YkkD; hypothetical protein 1254012..1254326 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460431 YP_001420886.1 CDS purU NC_009725.1 1254401 1255303 D produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase 1254401..1255303 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460432 YP_001420887.1 CDS proB NC_009725.1 1255673 1256785 D catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 1255673..1256785 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460433 YP_001420888.1 CDS proA NC_009725.1 1256782 1258029 D Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 1256782..1258029 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460434 YP_001420889.1 CDS ohrA NC_009725.1 1258142 1258567 D organic hydroperoxide resistance protein OhrA; OhrA 1258142..1258567 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460435 YP_001420890.1 CDS ohrR NC_009725.1 1258595 1259104 R organic hydroperoxide resistance transcriptionalregulator OhrR; OhrR complement(1258595..1259104) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460436 YP_001420891.1 CDS ohrB NC_009725.1 1259178 1259588 D organic hydroperoxide resistance protein (general stress protein 17o) (Gsp17o) OhrB; OhrB 1259178..1259588 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462004 YP_001420892.1 CDS RBAM_012980 NC_009725.1 1259729 1260313 D hypothetical protein 1259729..1260313 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462005 YP_001420893.1 CDS RBAM_012990 NC_009725.1 1260335 1260796 D hypothetical protein 1260335..1260796 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462006 YP_001420894.1 CDS RBAM_013000 NC_009725.1 1260801 1261928 D hypothetical protein 1260801..1261928 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462007 YP_001420895.1 CDS RBAM_013010 NC_009725.1 1261949 1263046 R hypothetical protein complement(1261949..1263046) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462008 YP_001420896.1 CDS RBAM_013020 NC_009725.1 1263318 1264502 R hypothetical protein complement(1263318..1264502) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462009 YP_001420897.1 CDS RBAM_013030 NC_009725.1 1264584 1265255 D activator of nucleoside metabolism; DNA-binding transcriptional activator YeiL 1264584..1265255 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461875 YP_001420898.1 CDS metE NC_009725.1 1265303 1267591 R catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase complement(1265303..1267591) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461876 YP_001420899.1 CDS ispA NC_009725.1 1267969 1268928 R major intracellular serine protease precursor (ISP-1) IspA; hypothetical protein complement(1267969..1268928) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461877 YP_001420900.1 CDS ykoB NC_009725.1 1269148 1269981 D sigma-H activator YkoB; hypothetical protein 1269148..1269981 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461878 YP_001420901.1 CDS ykoC NC_009725.1 1270027 1270788 R conserved hypothetical protein YkoC; hypothetical protein complement(1270027..1270788) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461879 YP_001420902.1 CDS ykoD NC_009725.1 1270763 1272400 R cation ABC transporter (ATP-binding protein) YkoD; hypothetical protein complement(1270763..1272400) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461880 YP_001420903.1 CDS ykoE NC_009725.1 1272387 1272986 R conserved hypothetical protein YkoE; hypothetical protein complement(1272387..1272986) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460485 YP_001420904.1 CDS ydhD NC_009725.1 1273427 1274689 D conserved hypothetical protein YdhD; hypothetical protein 1273427..1274689 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460486 YP_001420905.1 CDS ykzD NC_009725.1 1274778 1274915 D hypothetical protein YkzD; hypothetical protein 1274778..1274915 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460487 YP_001420906.1 CDS ykoK NC_009725.1 1275422 1276777 D divalent cation transporter YkoK; Mg2+ transporter 1275422..1276777 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460488 YP_001420907.1 CDS tnrA NC_009725.1 1276813 1277145 R HTH-type transcriptional regulator TnrA; TnrA complement(1276813..1277145) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460489 YP_001420908.1 CDS ykzB NC_009725.1 1277340 1277495 D hypothetical protein YkzB; hypothetical protein 1277340..1277495 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460490 YP_001420909.1 CDS ykoL NC_009725.1 1277584 1277766 D stress response protein YkoL; hypothetical protein 1277584..1277766 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459645 YP_001420910.1 CDS ykoM NC_009725.1 1277909 1278373 D transcriptional regulator (MarR family)YkoM; hypothetical protein 1277909..1278373 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459646 YP_001420911.1 CDS ykoP NC_009725.1 1278552 1279106 D hypothetical protein YkoP; hypothetical protein 1278552..1279106 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459647 YP_001420912.1 CDS ligD NC_009725.1 1279116 1280951 R catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA; ATP-dependent DNA ligase complement(1279116..1280951) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459648 YP_001420913.1 CDS ykoV NC_009725.1 1280954 1281835 R conserved hypothetical protein YkoV; hypothetical protein complement(1280954..1281835) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459649 YP_001420914.1 CDS ykoX NC_009725.1 1282463 1283032 D alkaline phosphatase YkoX; hypothetical protein 1282463..1283032 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459650 YP_001420915.1 CDS ykoY NC_009725.1 1283248 1284060 D toxic anion resistance protein YkoY; hypothetical protein 1283248..1284060 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460337 YP_001420916.1 CDS sigI NC_009725.1 1284346 1285092 D Heat shock-induced; RNA polymerase sigma factor SigI 1284346..1285092 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460338 YP_001420917.1 CDS ykrI NC_009725.1 1285089 1286258 D hypothetical protein YkrI; hypothetical protein 1285089..1286258 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460339 YP_001420918.1 CDS sspD NC_009725.1 1286265 1286459 R small acid-soluble spore protein (alpha/beta-type SASP) SspD; SspD complement(1286265..1286459) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460340 YP_001420919.1 CDS ykrK NC_009725.1 1286595 1287296 R hypothetical protein YkrK; hypothetical protein complement(1286595..1287296) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460341 YP_001420920.1 CDS ykrL NC_009725.1 1287445 1288338 D metalloprotease; heat shock protein HtpX 1287445..1288338 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460342 YP_001420921.1 CDS ykrM NC_009725.1 1288497 1289849 D transporter (membrane component) YkrM; hypothetical protein 1288497..1289849 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462844 YP_001420922.1 CDS RBAM_013280 NC_009725.1 1289944 1290618 D hypothetical protein 1289944..1290618 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462845 YP_001420923.1 CDS ykzE NC_009725.1 1290620 1290790 D hypothetical protein YkzE; hypothetical protein 1290620..1290790 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462846 YP_001420924.1 CDS ykrP NC_009725.1 1290831 1291853 R conserved hypothetical protein YkrP; hypothetical protein complement(1290831..1291853) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462847 YP_001420925.1 CDS kinE NC_009725.1 1292109 1294328 D two-component sensor histidine kinase homolog KinE; KinE 1292109..1294328 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462848 YP_001420926.1 CDS ogt NC_009725.1 1294325 1294822 D methylated-DNA--protein-cysteine methyltransferase Ogt; Ogt 1294325..1294822 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462849 YP_001420927.1 CDS mtnA NC_009725.1 1295064 1296125 R isomerizes methylthioribose-1-phosphate into methylthioribulose-1-phosphate; involved in methionine salvage pathway; methylthioribose-1-phosphate isomerase complement(1295064..1296125) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462386 YP_001420928.1 CDS mtnK NC_009725.1 1296132 1297316 R phosphorylates methylthioribose to form methylthioribose-1-phosphate; involved in methionine salvage pathway; methylthioribose kinase complement(1296132..1297316) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462387 YP_001420929.1 CDS ykrU NC_009725.1 1297673 1298452 R conserved hypothetical protein YkrU; hypothetical protein complement(1297673..1298452) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462388 YP_001420930.1 CDS mtnE NC_009725.1 1298544 1299740 D produces methionine from 2-keto-4-methylthiobutyrate and glutamine in vitro; mutations do not affect methionine salvage in vivo however; transaminase 1298544..1299740 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462389 YP_001420931.1 CDS mtnW NC_009725.1 1299931 1301172 D converts 2,3-diketo-5-methylthiopentyl-1-phosphate into 2-hydroxy 3-keto-5-methylthiopentenyl-1-phosphate; involved in methionine salvage; 2,3-diketo-5-methylthiopentyl-1-phosphate enolase 1299931..1301172 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462390 YP_001420932.1 CDS mtnX NC_009725.1 1301169 1301873 D converts 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate to 1,2-dihydroxy-3-keto-5-methylthiopentene; involved in methionine salvage; 2-hydroxy-3-keto-5-methylthiopentenyl-1- phosphate phosphatase 1301169..1301873 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462391 YP_001420933.1 CDS mtnB NC_009725.1 1301831 1302460 D converts methylthioribulose-1-phosphate into 2,3-diketo-5-methylthiopentyl-1-phosphate; involved in methionine salvage; methylthioribulose-1-phosphate dehydratase 1301831..1302460 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461546 YP_001420934.1 CDS mtnD NC_009725.1 1302476 1303012 D 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase MtnD; MtnD 1302476..1303012 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461547 YP_001420935.1 CDS spo0E NC_009725.1 1303293 1303553 D stage 0 sporulation regulatory protein Spo0E; Spo0E 1303293..1303553 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461548 YP_001420936.1 CDS kinD NC_009725.1 1303764 1305263 R two-component sensor histidine kinase KinD; KinD complement(1303764..1305263) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461549 YP_001420937.1 CDS ykvE NC_009725.1 1305480 1305926 D transcription regulator MarR family homolog YkvE; hypothetical protein 1305480..1305926 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461550 YP_001420938.1 CDS motB NC_009725.1 1305962 1306747 R with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotB complement(1305962..1306747) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461551 YP_001420939.1 CDS motA NC_009725.1 1306719 1307534 R With Mot B forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine.; flagellar motor protein MotA complement(1306719..1307534) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461746 YP_001420940.1 CDS clpE NC_009725.1 1307704 1309800 R ATP-dependent Clp protease-like (class III stress gene) ClpE; ClpE complement(1307704..1309800) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461747 YP_001420941.1 CDS ykvI NC_009725.1 1310202 1311239 D conserved hypothetical protein YkvI; hypothetical protein 1310202..1311239 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461748 YP_001420942.1 CDS RBAM_013480 NC_009725.1 1311337 1312458 D hypothetical protein 1311337..1312458 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461749 YP_001420943.1 CDS ykvJ NC_009725.1 1312621 1313367 D conserved hypothetical protein YkvJ; hypothetical protein 1312621..1313367 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461750 YP_001420944.1 CDS ykvK NC_009725.1 1313368 1313811 D 6-pyruvoyl tetrahydrobiopterin synthase homolog YkvK; hypothetical protein 1313368..1313811 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461751 YP_001420945.1 CDS ykvL NC_009725.1 1313804 1314535 D conserved hypothetical protein YkvL; hypothetical protein 1313804..1314535 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462868 YP_001420946.1 CDS ykvM NC_009725.1 1314553 1315047 D NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 1314553..1315047 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462869 YP_001420947.1 CDS ykvN NC_009725.1 1315624 1315965 R conserved hypothetical protein YkvN; hypothetical protein complement(1315624..1315965) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462870 YP_001420948.1 CDS ykvO NC_009725.1 1316134 1316880 D conserved hypothetical protein YkvO; hypothetical protein 1316134..1316880 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462871 YP_001420949.1 CDS RBAM_013550 NC_009725.1 1317001 1317228 D hypothetical protein 1317001..1317228 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462872 YP_001420950.1 CDS ykvR NC_009725.1 1317578 1317853 D hypothetical protein YkvR; hypothetical protein 1317578..1317853 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462873 YP_001420951.1 CDS RBAM_013570 NC_009725.1 1317925 1318110 R hypothetical protein complement(1317925..1318110) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460418 YP_001420952.1 CDS RBAM_013580 NC_009725.1 1318274 1318468 D hypothetical protein 1318274..1318468 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460419 YP_001420953.1 CDS ykvT NC_009725.1 1318743 1319366 D spore cortex-lytic enzyme YkvT; hypothetical protein 1318743..1319366 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460420 YP_001420954.1 CDS ykvU NC_009725.1 1319482 1320822 D sporulation protein YkvU; hypothetical protein 1319482..1320822 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460421 YP_001420955.1 CDS stoA NC_009725.1 1320885 1321379 D sporulation thiol-disulfide oxidoreductase A precursor StoA; StoA 1320885..1321379 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460422 YP_001420956.1 CDS ykvW NC_009725.1 1321622 1323535 D cation transport ATPase YkvW; hypothetical protein 1321622..1323535 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460423 YP_001420957.1 CDS ykvY NC_009725.1 1323649 1324743 D conserved hypothetical protein YkvY; hypothetical protein 1323649..1324743 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461939 YP_001420958.1 CDS ykvZ NC_009725.1 1325026 1325991 D HTH-type transcriptional regulator YkvZ; hypothetical protein 1325026..1325991 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461940 YP_001420959.1 CDS glcT NC_009725.1 1326042 1326908 D transcriptional antiterminator (BglG family) GlcT; GlcT 1326042..1326908 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461941 YP_001420960.1 CDS ptsG NC_009725.1 1327139 1329235 D phosphotransferase system (PTS) glucose-specificenzyme IICBA component PtsG; hypothetical protein 1327139..1329235 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461942 YP_001420961.1 CDS ptsH NC_009725.1 1329332 1329598 D phosphocarrier protein HPr component PtsH; phosphocarrier protein HPr 1329332..1329598 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461943 YP_001420962.1 CDS ptsI NC_009725.1 1329598 1331313 D phosphoenolpyruvate-protein phosphotransferase PtsI; PtsI 1329598..1331313 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461944 YP_001420963.1 CDS splA NC_009725.1 1331401 1331640 D transcriptional regulator SplA; SplA 1331401..1331640 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462945 YP_001420964.1 CDS spIB NC_009725.1 1331725 1332753 D spore photoproduct lyase SpIB; SpIB 1331725..1332753 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462946 YP_001420965.1 CDS mcpC NC_009725.1 1332880 1334847 D methyl-accepting chemotaxis protein McpC; McpC 1332880..1334847 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462947 YP_001420966.1 CDS ykwC NC_009725.1 1334929 1335795 D hypothetical oxidoreductase YkwC; hypothetical protein 1334929..1335795 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462948 YP_001420967.1 CDS RBAM_013730 NC_009725.1 1336046 1336330 R hypothetical protein complement(1336046..1336330) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462949 YP_001420968.1 CDS RBAM_013740 NC_009725.1 1336349 1336738 R hypothetical protein complement(1336349..1336738) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462950 YP_001420969.1 CDS ykwD NC_009725.1 1337126 1337911 R conserved hypothetical protein YkwD; hypothetical protein complement(1337126..1337911) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459970 YP_001420970.1 CDS ykuA NC_009725.1 1338247 1340379 D penicillin-binding protein dimerisationdomain YkuA; hypothetical protein 1338247..1340379 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459971 YP_001420971.1 CDS kinA NC_009725.1 1340557 1341969 D sporulation kinase A (stage II sporulation protein J) KinA; KinA 1340557..1341969 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459972 YP_001420972.1 CDS patA NC_009725.1 1342400 1343560 R aminotransferase PatA; aminotransferase complement(1342400..1343560) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459973 YP_001420973.1 CDS RBAM_013790 NC_009725.1 1343770 1343931 R hypothetical protein complement(1343770..1343931) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459974 YP_001420974.1 CDS cheV NC_009725.1 1344120 1345031 D chemotaxis protein CheV; CheV 1344120..1345031 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459975 YP_001420975.1 CDS ykyB NC_009725.1 1345075 1345539 R hypothetical protein YkyB; hypothetical protein complement(1345075..1345539) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463088 YP_001420976.1 CDS ykuC NC_009725.1 1345662 1346954 R hypothetical protein YkuC; hypothetical protein complement(1345662..1346954) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463089 YP_001420977.1 CDS ykuD NC_009725.1 1347030 1347530 R conserved hypothetical protein YkuD; hypothetical protein complement(1347030..1347530) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463090 YP_001420978.1 CDS ykuE NC_009725.1 1347599 1348414 R phosphoesterase YkuE; hypothetical protein complement(1347599..1348414) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463091 YP_001420979.1 CDS ykuF NC_009725.1 1348607 1349371 D hypothetical oxidoreductase YkuF; short chain dehydrogenase 1348607..1349371 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463092 YP_001420980.1 CDS ykuI NC_009725.1 1350127 1351347 D conserved hypothetical protein YkuI; hypothetical protein 1350127..1351347 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463093 YP_001420981.1 CDS ykuJ NC_009725.1 1351792 1352031 D hypothetical protein YkuJ; hypothetical protein 1351792..1352031 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461408 YP_001420982.1 CDS ykuK NC_009725.1 1352154 1352672 D conserved hypothetical protein YkuK; hypothetical protein 1352154..1352672 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461409 YP_001420983.1 CDS ykzF NC_009725.1 1352813 1353004 D hypothetical protein YkzF; hypothetical protein 1352813..1353004 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461410 YP_001420984.1 CDS ykuL NC_009725.1 1353148 1353591 D conserved hypothetical protein YkuL; hypothetical protein 1353148..1353591 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461411 YP_001420985.1 CDS ccpC NC_009725.1 1353732 1354613 D HTH-type transcriptional regulator CcpC; CcpC 1353732..1354613 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461412 YP_001420986.1 CDS ykuN NC_009725.1 1354725 1355198 D An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin 1354725..1355198 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461413 YP_001420987.1 CDS ykuO NC_009725.1 1355188 1356081 D conserved hypothetical protein YkuO; hypothetical protein 1355188..1356081 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461522 YP_001420988.1 CDS ykuP NC_009725.1 1356108 1356563 D probable flavodoxin-2 YkuP; hypothetical protein 1356108..1356563 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461523 YP_001420989.1 CDS ykuQ NC_009725.1 1356645 1357355 D etrahydrodipicolinate succinylase YkuQ; hypothetical protein 1356645..1357355 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461524 YP_001420990.1 CDS ykuR NC_009725.1 1357426 1358550 D hippurate hydrolase homolog YkuR; hypothetical protein 1357426..1358550 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461525 YP_001420991.1 CDS ykuS NC_009725.1 1358611 1358856 D conserved hypothetical protein YkuS; hypothetical protein 1358611..1358856 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461526 YP_001420992.1 CDS ykuT NC_009725.1 1358890 1359696 R conserved hypothetical protein YkuT; hypothetical protein complement(1358890..1359696) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461527 YP_001420993.1 CDS ykuV NC_009725.1 1359985 1360443 D hypothetical protein YkuV; hypothetical protein 1359985..1360443 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462492 YP_001420994.1 CDS rok NC_009725.1 1360896 1361492 D comK repressor Rok; Rok 1360896..1361492 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462493 YP_001420995.1 CDS yknT NC_009725.1 1361513 1362505 R conserved hypothetical protein YknT; hypothetical protein complement(1361513..1362505) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462494 YP_001420996.1 CDS mobA NC_009725.1 1362651 1363253 D Molybdopterin-guanine dinucleotide biosynthesis protein MobA; hypothetical protein 1362651..1363253 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462495 YP_001420997.1 CDS moeB NC_009725.1 1363305 1364324 D catalyzes the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD or ThiS in the molybdopterin or thiamin pyrophosphate biosynthesis pathways; thiamine/molybdopterin biosynthesis MoeB-like protein 1363305..1364324 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462496 YP_001420998.1 CDS moeA NC_009725.1 1364342 1365634 D molybdopterin biosynthesis protein MoeA; hypothetical protein 1364342..1365634 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462497 YP_001420999.1 CDS mobB NC_009725.1 1365601 1366116 D molybdopterin-guanine dinucleotide biosynthesis protein MobB; hypothetical protein 1365601..1366116 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462361 YP_001421000.1 CDS moaE NC_009725.1 1366117 1366587 D molybdenum cofactor biosynthesis protein MoaE; hypothetical protein 1366117..1366587 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462362 YP_001421001.1 CDS moaD NC_009725.1 1366584 1366817 D molybdopterin converting factor (subunit I) MoaD; hypothetical protein 1366584..1366817 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462363 YP_001421002.1 CDS yknW NC_009725.1 1367141 1367839 D hypothetical protein YknW; hypothetical protein 1367141..1367839 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462364 YP_001421003.1 CDS yknX NC_009725.1 1367841 1368977 D secretion protein YknX; hypothetical protein 1367841..1368977 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462365 YP_001421004.1 CDS yknY NC_009725.1 1368978 1369670 D ABC transporter (ATP-binding protein) YknY; hypothetical protein 1368978..1369670 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462366 YP_001421005.1 CDS yknZ NC_009725.1 1369667 1370860 D ABC transporter permease YknZ; hypothetical protein 1369667..1370860 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459630 YP_001421006.1 CDS fruR NC_009725.1 1371142 1371897 D transcription repressor of fructose operon FruR; FruR 1371142..1371897 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459631 YP_001421007.1 CDS fruK NC_009725.1 1371894 1372805 D fructose 1-phosphate kinase FruK; hypothetical protein 1371894..1372805 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459632 YP_001421008.1 CDS fruA NC_009725.1 1372820 1374721 D phosphotransferase system (PTS) fructose-specific enzyme IIABC component FruA; hypothetical protein 1372820..1374721 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459633 YP_001421009.1 CDS sipT NC_009725.1 1374852 1375433 D type I signal peptidase SipT; SipT 1374852..1375433 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459634 YP_001421010.1 CDS ykoA NC_009725.1 1375471 1375740 R hypothetical protein YkoA; hypothetical protein complement(1375471..1375740) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459635 YP_001421011.1 CDS ykpA NC_009725.1 1375900 1377519 D ABC transporter (ATP-binding protein) YkpA; hypothetical protein 1375900..1377519 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462498 YP_001421012.1 CDS ykpB NC_009725.1 1377632 1378540 D thiamin biosynthesis homolog YkpB; 2-dehydropantoate 2-reductase 1377632..1378540 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462499 YP_001421013.1 CDS ampS NC_009725.1 1378572 1379804 R aminopeptidase AmpS; hypothetical protein complement(1378572..1379804) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462500 YP_001421014.1 CDS ykpC NC_009725.1 1379905 1380039 R hypothetical protein YkpC; hypothetical protein complement(1379905..1380039) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462501 YP_001421015.1 CDS mreBH NC_009725.1 1380111 1381118 R cell-shape determining protein MreBH; rod-share determining protein MreBH complement(1380111..1381118) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462502 YP_001421016.1 CDS abh NC_009725.1 1381389 1381673 D transition state regulator Abh; Abh 1381389..1381673 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462503 YP_001421017.1 CDS kinC NC_009725.1 1381846 1383150 D sporulation kinase C (KinC); KinC 1381846..1383150 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461692 YP_001421018.1 CDS ykqA NC_009725.1 1383152 1383979 D conserved hypothetical protein YkqA; hypothetical protein 1383152..1383979 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461693 YP_001421019.1 CDS ykqB NC_009725.1 1384020 1384685 D conserved hypothetical protein YkqB; hypothetical protein 1384020..1384685 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461694 YP_001421020.1 CDS adeC NC_009725.1 1384834 1386567 D adenine deaminase AdeC; hypothetical protein 1384834..1386567 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461695 YP_001421021.1 CDS ykqC NC_009725.1 1386599 1388266 R conserved hypothetical protein YkqC; hypothetical protein complement(1386599..1388266) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461696 YP_001421022.1 CDS ykzG NC_009725.1 1388272 1388481 R hypothetical protein YkzG; hypothetical protein complement(1388272..1388481) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461697 YP_001421023.1 CDS ykrA NC_009725.1 1388836 1389609 D conserved hypothetical protein YkrA; hypothetical protein 1388836..1389609 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462536 YP_001421024.1 CDS def NC_009725.1 1389644 1390198 R cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase complement(1389644..1390198) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462537 YP_001421025.1 CDS ykyA NC_009725.1 1390744 1391382 D hypothetical protein YkyA; hypothetical protein 1390744..1391382 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462538 YP_001421026.1 CDS RBAM_014320 NC_009725.1 1391530 1391697 R hypothetical protein complement(1391530..1391697) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462539 YP_001421027.1 CDS mlnA NC_009725.1 1391841 1394147 D macrolactin synthesis; malonyl-CoA transacylase [AT]/oxidoreductase [OR]; MlnA 1391841..1394147 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462540 YP_001421028.1 CDS mlnB NC_009725.1 1394169 1406429 D macrolactin synthesis; polyketide synthase of type I; MlnB 1394169..1406429 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462541 YP_001421029.1 CDS mlnC NC_009725.1 1406429 1411201 D macrolactin synthesis; polyketide synthase of type I; MlnC 1406429..1411201 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462225 YP_001421030.1 CDS mlnD NC_009725.1 1411249 1419957 D macrolactin synthesis; polyketide synthase of type I; MlnD 1411249..1419957 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462226 YP_001421031.1 CDS mlnE NC_009725.1 1419950 1426954 D macrolactin synthesis; polyketide synthase of type I; MlnE 1419950..1426954 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462227 YP_001421032.1 CDS mlnF NC_009725.1 1426978 1432689 D macrolactin synthesis; polyketide synthase of type I; MlnF 1426978..1432689 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462228 YP_001421033.1 CDS mlnG NC_009725.1 1432686 1440068 D macrolactin synthesis; polyketide synthase of type I; MlnG 1432686..1440068 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462229 YP_001421034.1 CDS mlnH NC_009725.1 1440119 1443970 D macrolactin synthesis; polyketide synthase of type I; MlnH 1440119..1443970 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462230 YP_001421035.1 CDS mlnI NC_009725.1 1444003 1445094 D macrolactin synthesis; penicillin binding protein; MlnI 1444003..1445094 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461528 YP_001421036.1 CDS pdhA NC_009725.1 1445565 1446680 D pyruvate dehydrogenase E1 alpha subunit PdhA; PdhA 1445565..1446680 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461529 YP_001421037.1 CDS pdhB NC_009725.1 1446684 1447661 D pyruvate dehydrogenase E1 beta subunit PdhB; hypothetical protein 1446684..1447661 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461530 YP_001421038.1 CDS pdhC NC_009725.1 1447785 1449113 D pyruvate dehydrogenase (dihydrolipoamide acetyltransferase E2 subunit) PdhC; branched-chain alpha-keto acid dehydrogenase subunit E2 1447785..1449113 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461531 YP_001421039.1 CDS pdhD NC_009725.1 1449118 1450530 D E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 1449118..1450530 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461532 YP_001421040.1 CDS slp NC_009725.1 1450578 1450952 R small peptidoglycan-associated lipoprotein Slp; Slp complement(1450578..1450952) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461533 YP_001421041.1 CDS RBAM_014470 NC_009725.1 1451201 1452001 D polysaccharide deacetylase 1451201..1452001 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460543 YP_001421042.1 CDS RBAM_014480 NC_009725.1 1452115 1452234 D hypothetical protein 1452115..1452234 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460544 YP_001421043.1 CDS speA NC_009725.1 1452282 1453754 R arginine/lysine decarboxylase SpeA; SpeA complement(1452282..1453754) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460545 YP_001421044.1 CDS yktA NC_009725.1 1453934 1454200 D hypothetical protein YktA; hypothetical protein 1453934..1454200 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460546 YP_001421045.1 CDS yktB NC_009725.1 1454235 1454867 R hypothetical protein YktB; hypothetical protein complement(1454235..1454867) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460547 YP_001421046.1 CDS ykzI NC_009725.1 1455104 1455292 D hypothetical protein YkzI; hypothetical protein 1455104..1455292 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460548 YP_001421047.1 CDS suhB NC_009725.1 1455426 1456223 D inositol-1-monophosphatase SuhB; hypothetical protein 1455426..1456223 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459775 YP_001421048.1 CDS ykzC NC_009725.1 1456210 1456662 D conserved hypothetical protein YkzC; hypothetical protein 1456210..1456662 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459776 YP_001421049.1 CDS nprE NC_009725.1 1456714 1458279 R bacillolysin precursor NprE; NprE complement(1456714..1458279) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459777 YP_001421050.1 CDS ylaA1 NC_009725.1 1458602 1459675 D hypothetical protein YlaA1; hypothetical protein 1458602..1459675 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459778 YP_001421051.1 CDS ylaA2 NC_009725.1 1459759 1460538 D hypothetical protein YlaA2; hypothetical protein 1459759..1460538 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459779 YP_001421052.1 CDS ylaB NC_009725.1 1460528 1460797 D hypothetical protein YlaB; hypothetical protein 1460528..1460797 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459780 YP_001421053.1 CDS ylaC NC_009725.1 1460798 1461319 D RNA polymerase sigma-70 factor YlaC; hypothetical protein 1460798..1461319 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461993 YP_001421054.1 CDS ylaD NC_009725.1 1461316 1461609 D hypothetical protein YlaD; hypothetical protein 1461316..1461609 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461994 YP_001421055.1 CDS ylaE NC_009725.1 1461647 1462264 R hypothetical protein YlaE; hypothetical protein complement(1461647..1462264) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461995 YP_001421056.1 CDS ylaF NC_009725.1 1462574 1462762 R hypothetical protein YlaF; hypothetical protein complement(1462574..1462762) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461996 YP_001421057.1 CDS ylaG NC_009725.1 1462874 1464712 D GTP-binding elongation factor YlaG; hypothetical protein 1462874..1464712 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461997 YP_001421058.1 CDS ylaH NC_009725.1 1464769 1465089 D hypothetical protein YlaH; hypothetical protein 1464769..1465089 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461998 YP_001421059.1 CDS ylaI NC_009725.1 1465132 1465341 R hypothetical protein YlaI; hypothetical protein complement(1465132..1465341) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459498 YP_001421060.1 CDS ylaJ NC_009725.1 1465444 1466067 R hypothetical protein YlaJ; hypothetical protein complement(1465444..1466067) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459499 YP_001421061.1 CDS ylaK NC_009725.1 1466222 1467550 D phosphate starvation inducible protein YlaK; hypothetical protein 1466222..1467550 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459500 YP_001421062.1 CDS ylaL NC_009725.1 1467545 1468021 R hypothetical protein YlaL; hypothetical protein complement(1467545..1468021) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459501 YP_001421063.1 CDS ylaM NC_009725.1 1468125 1469054 D catalyzes the formation of glutamate from glutamine; glutaminase 1468125..1469054 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459502 YP_001421064.1 CDS ylaN NC_009725.1 1469162 1469443 D depletion of this protein in Bacillus subtilis results in defects in cell morphology; crystal structure of Staphylococcus protein shows homodimer; ligand binding protein; hypothetical protein 1469162..1469443 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459503 YP_001421065.1 CDS ftsW NC_009725.1 1469649 1470860 D cell division protein FtsW; hypothetical protein 1469649..1470860 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462164 YP_001421066.1 CDS pycA NC_009725.1 1470936 1474382 D biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate; pyruvate carboxylase 1470936..1474382 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462165 YP_001421067.1 CDS ctaA NC_009725.1 1474480 1475406 R cytochrome aa3-controlling protein CtaA; hypothetical protein complement(1474480..1475406) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462166 YP_001421068.1 CDS ctaB NC_009725.1 1475750 1476667 D converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 1475750..1476667 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462167 YP_001421069.1 CDS ctaC NC_009725.1 1476885 1477955 D cytochrome c oxidase subunit II precursor CtaC; hypothetical protein 1476885..1477955 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462168 YP_001421070.1 CDS ctaD NC_009725.1 1477987 1479855 D cytochrome caa3 oxidase (subunit I) CtaD; hypothetical protein 1477987..1479855 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462169 YP_001421071.1 CDS ctaE NC_009725.1 1479855 1480478 D cytochrome caa3 oxidase (subunit III) CtaE; hypothetical protein 1479855..1480478 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460369 YP_001421072.1 CDS ctaF NC_009725.1 1480481 1480813 D cytochrome caa3 oxidase (subunit IV) CtaF; hypothetical protein 1480481..1480813 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460370 YP_001421073.1 CDS ctaG NC_009725.1 1480829 1481722 D conserved hypothetical protein CtaG; hypothetical protein 1480829..1481722 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460371 YP_001421074.1 CDS ylbA NC_009725.1 1481757 1482116 R hypothetical protein YlbA; hypothetical protein complement(1481757..1482116) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460372 YP_001421075.1 CDS ylbB NC_009725.1 1482257 1482700 D hypothetical protein YlbB; hypothetical protein 1482257..1482700 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460373 YP_001421076.1 CDS ylbC NC_009725.1 1482785 1483825 D conserved hypothetical protein YlbC; hypothetical protein 1482785..1483825 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460374 YP_001421077.1 CDS ylbD NC_009725.1 1484001 1484411 D hypothetical protein YlbD; hypothetical protein 1484001..1484411 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461445 YP_001421078.1 CDS ylbE NC_009725.1 1484427 1484666 D hypothetical protein YlbE; hypothetical protein 1484427..1484666 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461446 YP_001421079.1 CDS ylbF NC_009725.1 1484737 1485186 D positive regulator of ComK; control of community development; hypothetical protein 1484737..1485186 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461447 YP_001421080.1 CDS ylbG NC_009725.1 1485245 1485517 D hypothetical protein YlbG; hypothetical protein 1485245..1485517 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461448 YP_001421081.1 CDS ylbH NC_009725.1 1485817 1486371 D conserved hypothetical protein YlbH; hypothetical protein 1485817..1486371 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461449 YP_001421082.1 CDS coaD NC_009725.1 1486376 1486858 D Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 1486376..1486858 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461450 YP_001421083.1 CDS ylbJ NC_009725.1 1486877 1488103 R conserved hypothetical protein YlbJ; hypothetical protein complement(1486877..1488103) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463270 YP_001421084.1 CDS ylbK NC_009725.1 1488283 1489062 D conserved hypothetical protein YlbK; hypothetical protein 1488283..1489062 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463271 YP_001421085.1 CDS ylbL NC_009725.1 1489068 1490090 D conserved hypothetical protein YlbL; hypothetical protein 1489068..1490090 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463272 YP_001421086.1 CDS ylbM NC_009725.1 1490109 1491356 R conserved hypothetical protein YlbM; hypothetical protein complement(1490109..1491356) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463273 YP_001421087.1 CDS ylbN NC_009725.1 1491565 1492083 D conserved hypothetical protein YlbN; hypothetical protein 1491565..1492083 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463274 YP_001421088.1 CDS rpmF NC_009725.1 1492105 1492284 D some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 1492105..1492284 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463275 YP_001421089.1 CDS ylbO NC_009725.1 1492443 1493018 D hypothetical protein YlbO; spore coat protein regulator protein YlbO 1492443..1493018 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460363 YP_001421090.1 CDS ylbP NC_009725.1 1493058 1493540 R conserved hypothetical protein YlbP; hypothetical protein complement(1493058..1493540) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460364 YP_001421091.1 CDS ylbQ NC_009725.1 1493703 1494584 D ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis; 2-dehydropantoate 2-reductase 1493703..1494584 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460365 YP_001421092.1 CDS yllA NC_009725.1 1494671 1496290 D conserved hypothetical protein YllA; hypothetical protein 1494671..1496290 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460366 YP_001421093.1 CDS yllB NC_009725.1 1496416 1496847 D MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ 1496416..1496847 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460367 YP_001421094.1 CDS mraW NC_009725.1 1496917 1497852 D conserved hypothetical protein YlxA; S-adenosyl-methyltransferase MraW 1496917..1497852 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460368 YP_001421095.1 CDS ftsL NC_009725.1 1497892 1498245 D cell-division protein FtsL; hypothetical protein 1497892..1498245 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461791 YP_001421096.1 CDS pbpB NC_009725.1 1498252 1500396 D penicillin-binding protein IIB PbpB; PbpB 1498252..1500396 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461792 YP_001421097.1 CDS spoVD NC_009725.1 1500510 1502429 D stage V sporulation protein SpoVD; SpoVD 1500510..1502429 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461793 YP_001421098.1 CDS murE NC_009725.1 1502625 1504097 D involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 1502625..1504097 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461794 YP_001421099.1 CDS mraY NC_009725.1 1504205 1505179 D First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 1504205..1505179 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461795 YP_001421100.1 CDS murD NC_009725.1 1505180 1506535 D UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 1505180..1506535 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461796 YP_001421101.1 CDS spoVE NC_009725.1 1506594 1507694 D stage V sporulation protein SpoVE; SpoVE 1506594..1507694 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462577 YP_001421102.1 CDS murG NC_009725.1 1507811 1508902 D UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 1507811..1508902 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462578 YP_001421103.1 CDS murB NC_009725.1 1508928 1509839 D catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 1508928..1509839 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462579 YP_001421104.1 CDS divIB NC_009725.1 1509968 1510756 D cell-division initiation protein DivIB; DivIB 1509968..1510756 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462580 YP_001421105.1 CDS ftsA NC_009725.1 1511306 1512619 D cell-division protein FtsA; hypothetical protein 1511306..1512619 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462581 YP_001421106.1 CDS ftsZ NC_009725.1 1512655 1513803 D GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 1512655..1513803 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462582 YP_001421107.1 CDS bpr NC_009725.1 1514078 1518373 D bacillopeptidase F precursor; upregulated by plant exudate; Bpr 1514078..1518373 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462951 YP_001421108.1 CDS spoIIGA NC_009725.1 1518589 1519518 D sporulation sigma-E factor processing peptidase (stage II sporulation protein GA) SpoIIGA; SpoIIGA 1518589..1519518 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462952 YP_001421109.1 CDS sigE NC_009725.1 1519576 1520295 D sigma-29; sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed in the mother cell at the onset of sporulation; sporulation sigma factor SigE 1519576..1520295 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462953 YP_001421110.1 CDS sigG NC_009725.1 1520436 1521218 D sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed after engulfment; this factor is involved in the transcription of small acid-soluble proteins involved in protecting the forespore chromatin; sporulation sigma factor SigG 1520436..1521218 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462954 YP_001421111.1 CDS ylmA NC_009725.1 1521347 1522144 D ABC transporter (ATP-binding protein) YlmA; hypothetical protein 1521347..1522144 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462955 YP_001421112.1 CDS ylmB NC_009725.1 1522331 1523611 D catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine; acetylornithine deacetylase 1522331..1523611 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462956 YP_001421113.1 CDS ylmC NC_009725.1 1523672 1523923 D conserved hypothetical protein YlmC; hypothetical protein 1523672..1523923 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462681 YP_001421114.1 CDS ylmD NC_009725.1 1524078 1524914 D conserved hypothetical protein YlmD; hypothetical protein 1524078..1524914 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462682 YP_001421115.1 CDS ylmE NC_009725.1 1524919 1525611 D conserved hypothetical protein YlmE; hypothetical protein 1524919..1525611 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462683 YP_001421116.1 CDS ylmF NC_009725.1 1525608 1526066 D conserved hypothetical protein YlmF; hypothetical protein 1525608..1526066 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462684 YP_001421117.1 CDS ylmG NC_009725.1 1526073 1526351 D conserved hypothetical protein YlmG; hypothetical protein 1526073..1526351 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462685 YP_001421118.1 CDS ylmH NC_009725.1 1526413 1527183 D conserved hypothetical protein YlmH; hypothetical protein 1526413..1527183 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462686 YP_001421119.1 CDS divIVA NC_009725.1 1527278 1527772 D cell-division initiation protein DivIVA; hypothetical protein 1527278..1527772 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462520 YP_001421120.1 CDS ileS NC_009725.1 1528115 1530880 D IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 1528115..1530880 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462521 YP_001421121.1 CDS ylyA NC_009725.1 1531031 1531402 D conserved hypothetical protein YlyA; hypothetical protein 1531031..1531402 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462522 YP_001421122.1 CDS lspA NC_009725.1 1531504 1531965 D lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 1531504..1531965 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462523 YP_001421123.1 CDS ylyB NC_009725.1 1531967 1532881 D pseudouridylate synthase YlyB; hypothetical protein 1531967..1532881 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462524 YP_001421124.1 CDS pyrR NC_009725.1 1533070 1533615 D regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity; bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase 1533070..1533615 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462525 YP_001421125.1 CDS pyrP NC_009725.1 1533770 1535080 D uracil permease PyrP; PyrP 1533770..1535080 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462417 YP_001421126.1 CDS pyrB NC_009725.1 1535221 1536135 D catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase 1535221..1536135 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462418 YP_001421127.1 CDS pyrC NC_009725.1 1536119 1537405 D dihydroorotase PyrC; hypothetical protein 1536119..1537405 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462419 YP_001421128.1 CDS pyrAA NC_009725.1 1537402 1538496 D catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 1537402..1538496 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462420 YP_001421129.1 CDS carB NC_009725.1 1538481 1541696 D four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 1538481..1541696 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462421 YP_001421130.1 CDS pyrK NC_009725.1 1541693 1542463 D responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the pyrD subunit to the ultimate electron acceptor NAD(+); dihydroorotate dehydrogenase electron transfer subunit 1541693..1542463 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462422 YP_001421131.1 CDS pyrD NC_009725.1 1542463 1543398 D catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway, using a flavin nucleotide as an essential cofactor; subclass 1B is a heterotetramer consisting of two PyrDB subunits, similar to the PyrDA subunits and two PyrK subunits; dihydroorotate dehydrogenase 1B 1542463..1543398 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461856 YP_001421132.1 CDS pyrF NC_009725.1 1543367 1544083 D type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase 1543367..1544083 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461857 YP_001421133.1 CDS pyrE NC_009725.1 1544062 1544712 D involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 1544062..1544712 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461858 YP_001421134.1 CDS cysH NC_009725.1 1545045 1545746 D phosphoadenosine phosphosulfate reductase CysH; hypothetical protein 1545045..1545746 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461859 YP_001421135.1 CDS cysP NC_009725.1 1545759 1546823 D sulfate permease CysP; CysP 1545759..1546823 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461860 YP_001421136.1 CDS sat NC_009725.1 1546872 1548020 D ATP sulfurylase; ATPS; converts ATP and sulfate to 5'phosphosulfate and pyrophosphate; in some organisms this enzyme is involved in the incorporation of inorganic sulfate while in others it is involved in the production of ATP in the reverse direction; the enzyme from Thermus thermophilus is dimeric and binds a zinc ion that is coordinated by cysteine and histidine residues that are not found in all related proteins but is found in some thermophilic organisms; sulfate adenylyltransferase 1546872..1548020 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461861 YP_001421137.1 CDS cysC NC_009725.1 1548034 1548627 D adenylyl-sulfate kinase CysC; hypothetical protein 1548034..1548627 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461451 YP_001421138.1 CDS ylnD NC_009725.1 1548752 1549525 D uroporphyrin-III C-methyltransferase YlnD; hypothetical protein 1548752..1549525 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461452 YP_001421139.1 CDS sirB NC_009725.1 1549526 1550311 D sirohydrochlorin ferrochelatase SirB; SirB 1549526..1550311 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461453 YP_001421140.1 CDS ylnF NC_009725.1 1550292 1550780 D uroporphyrin-III C-methyltransferase YlnF; hypothetical protein 1550292..1550780 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461454 YP_001421141.1 CDS yloA NC_009725.1 1551228 1552934 R uroporphyrin-III C-methyltransferase YloA; hypothetical protein complement(1551228..1552934) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461455 YP_001421142.1 CDS yloB NC_009725.1 1553054 1555726 D calcium-transporting ATPase YloB; hypothetical protein 1553054..1555726 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461456 YP_001421143.1 CDS yloC NC_009725.1 1555808 1556683 D conserved hypothetical protein YloC; hypothetical protein 1555808..1556683 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460398 YP_001421144.1 CDS ylzA NC_009725.1 1556760 1557029 D conserved hypothetical protein YlzA; hypothetical protein 1556760..1557029 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460399 YP_001421145.1 CDS gmk NC_009725.1 1557037 1557651 D Essential for recycling GMP and indirectly, cGMP; guanylate kinase 1557037..1557651 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460400 YP_001421146.1 CDS rpoZ NC_009725.1 1557655 1557858 D Promotes RNA polymerase assembly; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega 1557655..1557858 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460401 YP_001421147.1 CDS yloI NC_009725.1 1557949 1559169 D pantothenate metabolism flavoprotein YloI; hypothetical protein 1557949..1559169 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460402 YP_001421148.1 CDS priA NC_009725.1 1559166 1561577 D binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA 1559166..1561577 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460403 YP_001421149.1 CDS defA NC_009725.1 1561602 1562084 D cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 1561602..1562084 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460549 YP_001421150.1 CDS fmt NC_009725.1 1562089 1563042 D methionyl-tRNA formyltransferase Fmt; hypothetical protein 1562089..1563042 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460550 YP_001421151.1 CDS rsmB NC_009725.1 1563029 1564372 D ribosomal RNA small subunit methyltransferase RsmB; RsmB 1563029..1564372 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460551 YP_001421152.1 CDS yloN NC_009725.1 1564376 1565467 D 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N 1564376..1565467 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460552 YP_001421153.1 CDS prpC NC_009725.1 1565464 1566234 D protein phosphatase PrpC; PrpC 1565464..1566234 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460553 YP_001421154.1 CDS prkC NC_009725.1 1566228 1568171 D serine/threonine-protein kinase PrkC; PrkC 1566228..1568171 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460554 YP_001421155.1 CDS engC NC_009725.1 1568186 1569076 D EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity; ribosome-associated GTPase 1568186..1569076 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460088 YP_001421156.1 CDS rpe NC_009725.1 1569078 1569728 D catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate; ribulose-phosphate 3-epimerase 1569078..1569728 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460089 YP_001421157.1 CDS thiN NC_009725.1 1569797 1570441 D thiamin pyrophosphokinase ThiN; ThiN 1569797..1570441 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460090 YP_001421158.1 CDS spoVM NC_009725.1 1570528 1570608 D involved in the production of the spore cortex and coat; stage V sporulation protein M 1570528..1570608 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460091 YP_001421159.1 CDS rpmB NC_009725.1 1570686 1570874 R required for 70S ribosome assembly; 50S ribosomal protein L28 complement(1570686..1570874) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460092 YP_001421160.1 CDS yloU NC_009725.1 1571133 1571495 D conserved hypothetical protein YloU; hypothetical protein 1571133..1571495 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460093 YP_001421161.1 CDS yloV NC_009725.1 1571511 1573178 D conserved hypothetical protein YloV; dihydroxyacetone kinase family protein 1571511..1573178 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461099 YP_001421162.1 CDS sdaAB NC_009725.1 1573321 1573983 D L-serine dehydratase (beta chain) SdaAB; SdaAB 1573321..1573983 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461100 YP_001421163.1 CDS sdaAA NC_009725.1 1574004 1574906 D L-serine dehydratase (alpha chain) SdaAA; SdaAA 1574004..1574906 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461101 YP_001421164.1 CDS recG NC_009725.1 1574884 1576932 D catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 1574884..1576932 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461102 YP_001421165.1 CDS fapR NC_009725.1 1577039 1577605 D negative regulator of genes involved in fatty acid and phospholipid biosynthesis for gram positive bacteria; fatty acid biosynthesis transcriptional regulator 1577039..1577605 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461103 YP_001421166.1 CDS plsX NC_009725.1 1577619 1578617 D involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX 1577619..1578617 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461104 YP_001421167.1 CDS fabD NC_009725.1 1578636 1579589 D malonyl CoA-acyl carrier protein transacylase FabD; hypothetical protein 1578636..1579589 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461726 YP_001421168.1 CDS fabG NC_009725.1 1579582 1580322 D 3-oxoacyl-[acyl-carrier-protein] reductase FabG; hypothetical protein 1579582..1580322 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461727 YP_001421169.1 CDS acpP NC_009725.1 1580407 1580640 D carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 1580407..1580640 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461728 YP_001421170.1 CDS rnc NC_009725.1 1580779 1581528 D cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 1580779..1581528 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461729 YP_001421171.1 CDS smc NC_009725.1 1581630 1585190 D chromosome partition protein Smc; hypothetical protein 1581630..1585190 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461730 YP_001421172.1 CDS ftsY NC_009725.1 1585210 1586199 D cell division protein FtsY homolog; hypothetical protein 1585210..1586199 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461731 YP_001421173.1 CDS RBAM_015790 NC_009725.1 1586283 1587053 D hypothetical protein 1586283..1587053 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461844 YP_001421174.1 CDS ylxM NC_009725.1 1587175 1587507 D conserved hypothetical protein YlxM; DNA-binding protein 1587175..1587507 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461845 YP_001421175.1 CDS ffh NC_009725.1 1587521 1588861 D signal recognition particle-like (SRP) component Ffh; hypothetical protein 1587521..1588861 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461846 YP_001421176.1 CDS rpsP NC_009725.1 1588967 1589239 D binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 1588967..1589239 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461847 YP_001421177.1 CDS ylqC NC_009725.1 1589239 1589484 D conserved hypothetical protein YlqC; hypothetical protein 1589239..1589484 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461848 YP_001421178.1 CDS ylqD NC_009725.1 1589575 1589961 D hypothetical protein YlqD; hypothetical protein 1589575..1589961 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461849 YP_001421179.1 CDS rimM NC_009725.1 1589966 1590490 D Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 1589966..1590490 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462809 YP_001421180.1 CDS trmD NC_009725.1 1590487 1591218 D methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 1590487..1591218 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462810 YP_001421181.1 CDS rplS NC_009725.1 1591359 1591706 D this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 1591359..1591706 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462811 YP_001421182.1 CDS rbgA NC_009725.1 1591849 1592697 D essential GTPase; functions in ribosome assembly; binds a unique part of the 23S rRNA; interacts with ribosomal protein L25(Ctc); ribosomal biogenesis GTPase 1591849..1592697 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462812 YP_001421183.1 CDS rnhB NC_009725.1 1592770 1593537 D RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 1592770..1593537 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462813 YP_001421184.1 CDS ylqG NC_009725.1 1593554 1595257 D hypothetical protein YlqG; hypothetical protein 1593554..1595257 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462814 YP_001421185.1 CDS ylqH NC_009725.1 1595254 1595535 D conserved hypothetical protein YlqH; hypothetical protein 1595254..1595535 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463276 YP_001421186.1 CDS sucC NC_009725.1 1595710 1596867 D catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 1595710..1596867 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463277 YP_001421187.1 CDS sucD NC_009725.1 1596896 1597798 D Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha 1596896..1597798 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463278 YP_001421188.1 CDS smf NC_009725.1 1597863 1598762 D DNA processing protein Smf; hypothetical protein 1597863..1598762 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463279 YP_001421189.1 CDS topA NC_009725.1 1598944 1601019 D catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 1598944..1601019 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463280 YP_001421190.1 CDS gid NC_009725.1 1601084 1602391 D TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine; tRNA (uracil-5-)-methyltransferase Gid 1601084..1602391 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463281 YP_001421191.1 CDS xerC NC_009725.1 1602461 1603378 D site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC 1602461..1603378 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462957 YP_001421192.1 CDS clpQ NC_009725.1 1603394 1603939 D heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 1603394..1603939 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462958 YP_001421193.1 CDS hslU NC_009725.1 1603956 1605359 D heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 1603956..1605359 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462959 YP_001421194.1 CDS codY NC_009725.1 1605397 1606176 D GTP binding protein; CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase (By similarity). It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; transcriptional repressor CodY 1605397..1606176 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462960 YP_001421195.1 CDS flgB NC_009725.1 1606530 1606919 D with FlgF and C makes up the proximal portion of the flagellar basal body rod; Vibrio parahaemolyticus protein is associated with the polar flagella; flagellar basal body rod protein FlgB 1606530..1606919 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462961 YP_001421196.1 CDS flgC NC_009725.1 1606919 1607371 D with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC 1606919..1607371 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462962 YP_001421197.1 CDS fliE NC_009725.1 1607382 1607702 D forms a junction between the M-ring and FlgB during flagella biosynthesis; flagellar hook-basal body protein FliE 1607382..1607702 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461014 YP_001421198.1 CDS fliF NC_009725.1 1607745 1609355 D the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein 1607745..1609355 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461015 YP_001421199.1 CDS fliG NC_009725.1 1609368 1610384 D One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G 1609368..1610384 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461016 YP_001421200.1 CDS fliH NC_009725.1 1610506 1611132 D binds to and inhibits the function of flagella specific ATPase FliI; flagellar assembly protein H 1610506..1611132 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461017 YP_001421201.1 CDS fliI NC_009725.1 1611129 1612445 D involved in type III protein export during flagellum assembly; flagellum-specific ATP synthase 1611129..1612445 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461018 YP_001421202.1 CDS fliJ NC_009725.1 1612451 1612894 D rod/hook and filament chaperone; flagellar biosynthesis chaperone 1612451..1612894 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461019 YP_001421203.1 CDS ylxF NC_009725.1 1612906 1613520 D conserved hypothetical protein YlxF; hypothetical protein 1612906..1613520 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462542 YP_001421204.1 CDS fliK NC_009725.1 1613527 1614873 D flagellar hook-length control protein FliK; FliK 1613527..1614873 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462543 YP_001421205.1 CDS flgD NC_009725.1 1614870 1615310 D acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; flagellar basal body rod modification protein 1614870..1615310 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462544 YP_001421206.1 CDS flgG NC_009725.1 1615335 1616111 D makes up the distal portion of the flagellar basal body rod; flagellar basal body rod protein FlgG 1615335..1616111 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462545 YP_001421207.1 CDS RBAM_016130 NC_009725.1 1616151 1616366 D hypothetical protein 1616151..1616366 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462546 YP_001421208.1 CDS fliL NC_009725.1 1616363 1616782 D interacts with the cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring; flagellar basal body-associated protein FliL 1616363..1616782 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462547 YP_001421209.1 CDS fliM NC_009725.1 1616816 1617814 D with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; flagellar motor switch protein FliM 1616816..1617814 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459769 YP_001421210.1 CDS fliY NC_009725.1 1617804 1618940 D One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein 1617804..1618940 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459770 YP_001421211.1 CDS cheY NC_009725.1 1618967 1619329 D two-component response regulator CheY; hypothetical protein 1618967..1619329 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459771 YP_001421212.1 CDS fliZ NC_009725.1 1619344 1619997 D possible structural component of the flagellum that anchors the rod to the membrane; flagella biosynthesis protein FliZ 1619344..1619997 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459772 YP_001421213.1 CDS fliP NC_009725.1 1619990 1620655 D FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 1619990..1620655 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459773 YP_001421214.1 CDS fliQ NC_009725.1 1620670 1620939 D with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliQ 1620670..1620939 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459774 YP_001421215.1 CDS fliR NC_009725.1 1620946 1621725 D FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliR 1620946..1621725 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461980 YP_001421216.1 CDS flhB NC_009725.1 1621725 1622804 D membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB 1621725..1622804 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461981 YP_001421217.1 CDS flhA NC_009725.1 1622838 1624871 D membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 1622838..1624871 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461982 YP_001421218.1 CDS flhF NC_009725.1 1624871 1625962 D positive regulator of class III flagellar genes; flagellar biosynthesis regulator FlhF 1624871..1625962 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461983 YP_001421219.1 CDS ylxH NC_009725.1 1625959 1626852 D conserved hypothetical protein YlxH; hypothetical protein 1625959..1626852 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461984 YP_001421220.1 CDS cheB NC_009725.1 1626849 1627916 D chemotaxis response regulator; regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase 1626849..1627916 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461985 YP_001421221.1 CDS cheA NC_009725.1 1627928 1629940 D two-component sensor histidine kinase; COG0643 Chemotaxis protein; cell motility and secretion/signal transduction mechanism; hypothetical protein 1627928..1629940 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461619 YP_001421222.1 CDS cheW NC_009725.1 1629963 1630436 D chemotaxis protein CheW; hypothetical protein 1629963..1630436 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461620 YP_001421223.1 CDS cheC NC_009725.1 1630452 1631081 D chemotaxis protein CheC; hypothetical protein 1630452..1631081 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461621 YP_001421224.1 CDS cheD NC_009725.1 1631078 1631578 D catalyzes the conversion of glutamine residues to glutamate on methyl-accepting chemotaxis receptors; chemoreceptor glutamine deamidase CheD 1631078..1631578 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461622 YP_001421225.1 CDS sigD NC_009725.1 1631605 1632369 D expressed in late exponential phase; controls the expression of genes coding cell surface proteins involved in chemotaxis, flagellar assembly, and autolysis; RNA polymerase sigma factor SigD 1631605..1632369 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461623 YP_001421226.1 CDS swrB NC_009725.1 1632397 1632864 D swarming motility protein; SwrB 1632397..1632864 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461624 YP_001421227.1 CDS rpsB NC_009725.1 1633008 1633748 D one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 1633008..1633748 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459682 YP_001421228.1 CDS tsf NC_009725.1 1633848 1634729 D EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 1633848..1634729 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459683 YP_001421229.1 CDS pyrH NC_009725.1 1634875 1635597 D Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 1634875..1635597 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459684 YP_001421230.1 CDS frr NC_009725.1 1635600 1636157 D Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 1635600..1636157 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459685 YP_001421231.1 CDS uppS NC_009725.1 1636283 1637065 D catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate; undecaprenyl pyrophosphate synthase 1636283..1637065 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459686 YP_001421232.1 CDS cdsA NC_009725.1 1637078 1637866 D phosphatidate cytidylyltransferase (CDP-diglyceride synthase) CdsA; hypothetical protein 1637078..1637866 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459687 YP_001421233.1 CDS dxr NC_009725.1 1637922 1639073 D catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1637922..1639073 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461383 YP_001421234.1 CDS yluC NC_009725.1 1639086 1640348 D zinc metalloprotease YluC; hypothetical protein 1639086..1640348 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461384 YP_001421235.1 CDS proS NC_009725.1 1640380 1642074 D catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 1640380..1642074 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461385 YP_001421236.1 CDS polC NC_009725.1 1642186 1646499 D catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; required for leading strand synthesis; PolC exhibits 3' to 5' exonuclease activity; DNA polymerase III PolC 1642186..1646499 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461386 YP_001421237.1 CDS ylxS NC_009725.1 1646739 1647209 D in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein 1646739..1647209 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461387 YP_001421238.1 CDS nusA NC_009725.1 1647249 1648370 D modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 1647249..1648370 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461388 YP_001421239.1 CDS ylxR NC_009725.1 1648384 1648659 D conserved hypothetical protein YlxR; hypothetical protein 1648384..1648659 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460776 YP_001421240.1 CDS ylxQ NC_009725.1 1648661 1648963 D ribosomal protein L7AE family YlxQ; hypothetical protein 1648661..1648963 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460777 YP_001421241.1 CDS infB NC_009725.1 1648983 1651133 D Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 1648983..1651133 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460778 YP_001421242.1 CDS ylxP NC_009725.1 1651130 1651408 D conserved hypothetical protein YlxP; hypothetical protein 1651130..1651408 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460779 YP_001421243.1 CDS rbfA NC_009725.1 1651431 1651778 D associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 1651431..1651778 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460780 YP_001421244.1 CDS truB NC_009725.1 1651863 1652792 D catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 1651863..1652792 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460781 YP_001421245.1 CDS ribC NC_009725.1 1652812 1653753 D catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase 1652812..1653753 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460064 YP_001421246.1 CDS rpsO NC_009725.1 1653919 1654188 D primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 1653919..1654188 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460065 YP_001421247.1 CDS pnpA NC_009725.1 1654363 1656486 D polynucleotide phosphorylase (PNPase) PnpA; polynucleotide phosphorylase 1654363..1656486 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460066 YP_001421248.1 CDS ylxY NC_009725.1 1656599 1657558 D deacetylase YlxY; hypothetical protein 1656599..1657558 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460067 YP_001421249.1 CDS mlpA NC_009725.1 1657599 1658834 D zinc protease MlpA; MlpA 1657599..1658834 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460068 YP_001421250.1 CDS ymxH NC_009725.1 1658913 1659170 D conserved hypothetical protein YmxH; hypothetical protein 1658913..1659170 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460069 YP_001421251.1 CDS spoVFA NC_009725.1 1659328 1660218 D catalyzes the synthesis of dipicolinic acid from dihydroxydipicolinic acid; plays a role in spore heat resistance; dipicolinate synthase subunit A 1659328..1660218 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459693 YP_001421252.1 CDS spoVFB NC_009725.1 1660221 1660811 D involved in production of dipicolinic acid (pyridine-2,6-dicarboxylic acid, DPA) which is synthesized late in sporulation in the mother cell and accumulates in the spore; mutations in this gene result in a lack of DPA synthesis; presumably functions with SpoVFA to form the synthase enzyme; dipicolinate synthase subunit B 1660221..1660811 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459694 YP_001421253.1 CDS asd NC_009725.1 1660946 1661986 D catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase 1660946..1661986 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459695 YP_001421254.1 CDS dapG NC_009725.1 1662074 1663288 D catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; diaminopimelate sensitive; aspartate kinase 1662074..1663288 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459696 YP_001421255.1 CDS dapA NC_009725.1 1663319 1664188 D catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 1663319..1664188 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459697 YP_001421256.1 CDS ymfA NC_009725.1 1664367 1666034 D conserved hypothetical protein YmfA; hypothetical protein 1664367..1666034 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459698 YP_001421257.1 CDS tepA NC_009725.1 1666150 1666887 D translocation-enhancing protein TepA; TepA 1666150..1666887 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461907 YP_001421258.1 CDS RBAM_016640 NC_009725.1 1666884 1667093 D hypothetical protein 1666884..1667093 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461908 YP_001421259.1 CDS ftsK NC_009725.1 1667228 1669588 D DNA translocase FtsK; hypothetical protein 1667228..1669588 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461909 YP_001421260.1 CDS ymfC NC_009725.1 1669713 1670438 D hypothetical transcriptional regulator YmfC; hypothetical protein 1669713..1670438 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461910 YP_001421261.1 CDS RBAM_016670 NC_009725.1 1670451 1671779 D hypothetical protein 1670451..1671779 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461911 YP_001421262.1 CDS RBAM_016680 NC_009725.1 1671885 1672340 D hypothetical protein 1671885..1672340 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461912 YP_001421263.1 CDS RBAM_016690 NC_009725.1 1672340 1675459 D hypothetical protein 1672340..1675459 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462435 YP_001421264.1 CDS RBAM_016700 NC_009725.1 1675611 1676891 D hypothetical protein 1675611..1676891 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462436 YP_001421265.1 CDS ymfH NC_009725.1 1676888 1678174 D conserved hypothetical protein YmfH; hypothetical protein 1676888..1678174 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462437 YP_001421266.1 CDS fabG NC_009725.1 1678234 1678962 D Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 1678234..1678962 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462438 YP_001421267.1 CDS ymfJ NC_009725.1 1679038 1679295 D hypothetical protein YmfJ; hypothetical protein 1679038..1679295 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462439 YP_001421268.1 CDS RBAM_016740 NC_009725.1 1679426 1680217 D hypothetical protein 1679426..1680217 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462440 YP_001421269.1 CDS ymfM NC_009725.1 1680284 1681132 D conserved hypothetical protein YmfM; hypothetical protein 1680284..1681132 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460573 YP_001421270.1 CDS pgsA NC_009725.1 1681205 1681786 D CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase PgsA; hypothetical protein 1681205..1681786 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460574 YP_001421271.1 CDS cinA NC_009725.1 1681804 1683054 D competence-damage inducible protein CinA; competence damage-inducible protein A 1681804..1683054 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460575 YP_001421272.1 CDS recA NC_009725.1 1683225 1684268 D catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 1683225..1684268 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460576 YP_001421273.1 CDS pbpX NC_009725.1 1684436 1685617 D penicillin-binding protein PbpX; PbpX 1684436..1685617 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460577 YP_001421274.1 CDS ymdA NC_009725.1 1685910 1687469 D protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP; phosphodiesterase 1685910..1687469 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460578 YP_001421275.1 CDS ymdB NC_009725.1 1687530 1688324 D conserved hypothetical protein YmdB; hypothetical protein 1687530..1688324 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462065 YP_001421276.1 CDS spoVS NC_009725.1 1688524 1688784 D stage V sporulation protein S (SpoVS); hypothetical protein 1688524..1688784 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462066 YP_001421277.1 CDS tdh NC_009725.1 1689045 1690088 D converts threonine and NAD to 1,2-amino-3-oxobutanoate and NADH; functions in threonine catabolism; L-threonine 3-dehydrogenase 1689045..1690088 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462067 YP_001421278.1 CDS kbl NC_009725.1 1690104 1691279 D catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine; 2-amino-3-ketobutyrate CoA ligase 1690104..1691279 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462068 YP_001421279.1 CDS ymcB NC_009725.1 1691422 1692951 D catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 1691422..1692951 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462069 YP_001421280.1 CDS ymcA NC_009725.1 1692954 1693385 D conserved hypothetical protein; control of community development; hypothetical protein 1692954..1693385 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462070 YP_001421281.1 CDS cotE NC_009725.1 1693638 1694183 D outer spore coat protein CotE; CotE 1693638..1694183 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460075 YP_001421282.1 CDS mutS NC_009725.1 1694299 1696887 D This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 1694299..1696887 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460076 YP_001421283.1 CDS mutL NC_009725.1 1696903 1698777 D This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein 1696903..1698777 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460077 YP_001421284.1 CDS baeB NC_009725.1 1700345 1701022 D bacillaene synthesis; hydroxyacylglutathione hydrolase; BaeB 1700345..1701022 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460078 YP_001421285.1 CDS baeC NC_009725.1 1701337 1702206 D bacillaene synthesis; malonyl-CoA-[acyl-carrier-protein] transacylase [AT]; BaeC 1701337..1702206 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460079 YP_001421286.1 CDS baeD NC_009725.1 1702343 1703317 D bacillaene synthesis; malonyl-CoA-[acyl-carrier-protein] transacylase [AT]/oxidoreductase [OR]; BaeD 1702343..1703317 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460080 YP_001421287.1 CDS baeE NC_009725.1 1703319 1705559 D bacillaene synthesis; malonyl-CoA-[acyl-carrier protein] transacylase [AT]/oxidoreductase [OR]; BaeE 1703319..1705559 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462446 YP_001421288.1 CDS acpK NC_009725.1 1705625 1705873 D bacillaene synthesis; Acyl carrier proteins are involved in the biosynthetic pathways of fatty acids, phospholipids, lipopolysaccharides, and oligosaccharides; this ACP may be involved in the biosynthesis of lipopeptide antibiotics; acyl carrier protein 1705625..1705873 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462447 YP_001421289.1 CDS baeG NC_009725.1 1705925 1707187 D bacillaene synthesis; 3-hydroxy-3-methylglutaryl CoA synthase; BaeG 1705925..1707187 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462448 YP_001421290.1 CDS baeH NC_009725.1 1707184 1707957 D bacillaene synthesis; involved in polyketide synthesis; polyketide biosynthesis enoyl-CoA hydratase 1707184..1707957 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462449 YP_001421291.1 CDS baeI NC_009725.1 1707967 1708716 D bacillaene synthesis; involved in polyketide production; polyketide biosynthesis enoyl-CoA hydratase 1707967..1708716 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462450 YP_001421292.1 CDS baeJ NC_009725.1 1708756 1723704 D bacillaene synthesis; hybrid NRPS/PKS protein; BaeJ 1708756..1723704 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462451 YP_001421293.1 CDS baeL NC_009725.1 1723706 1737133 D bacillaene synthesis; polyketide synthase of type I; BaeL 1723706..1737133 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461785 YP_001421294.1 CDS baeM NC_009725.1 1737151 1747686 D bacillaene synthesis; polyketide synthase of type I; BaeM 1737151..1747686 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461786 YP_001421295.1 CDS baeN NC_009725.1 1747676 1763977 D bacillaene synthesis; hybrid NRPS/PKS protein; BaeN 1747676..1763977 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461787 YP_001421296.1 CDS baeR NC_009725.1 1763991 1771439 D bacillaene synthesis; polyketide synthase of type I; BaeR 1763991..1771439 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461788 YP_001421297.1 CDS baeS NC_009725.1 1771576 1772787 R bacillaene synthesis; cytochrome P450 'oxidase' 107K1; hypothetical protein complement(1771576..1772787) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461789 YP_001421298.1 CDS nucB NC_009725.1 1773076 1773510 D sporulation-specific extracellular nuclease precursor NucB; NucB 1773076..1773510 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461790 YP_001421299.1 CDS yoaK NC_009725.1 1773630 1774325 D conserved membrane protein YoaK; hypothetical protein 1773630..1774325 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460795 YP_001421300.1 CDS ymzB NC_009725.1 1774359 1774721 R hypothetical protein YmzB; hypothetical protein complement(1774359..1774721) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460796 YP_001421301.1 CDS aprX NC_009725.1 1774914 1776242 R intracellular alkaline serine proteinase AprX; AprX complement(1774914..1776242) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460797 YP_001421302.1 CDS ymaC NC_009725.1 1776910 1777617 D phage- replication protein homolog YmaC; hypothetical protein 1776910..1777617 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460798 YP_001421303.1 CDS ymaD NC_009725.1 1777677 1778129 D conserved hypothetical protein YmaD; hypothetical protein 1777677..1778129 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460799 YP_001421304.1 CDS ebrB NC_009725.1 1778143 1778496 R multidrug resistance protein EbrB; EbrB complement(1778143..1778496) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460800 YP_001421305.1 CDS ebrA NC_009725.1 1778514 1778828 R multidrug resistance protein EbrA; EbrA complement(1778514..1778828) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462530 YP_001421306.1 CDS ymaF NC_009725.1 1779374 1779778 D hypothetical protein YmaF; hypothetical protein 1779374..1779778 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462531 YP_001421307.1 CDS miaA NC_009725.1 1779877 1780821 D IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 1779877..1780821 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462532 YP_001421308.1 CDS hfq NC_009725.1 1780861 1781082 D Stimulates the elongation of poly(A) tails; RNA-binding protein Hfq 1780861..1781082 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462533 YP_001421309.1 CDS ymzC NC_009725.1 1781181 1781456 D hypothetical protein YmzC; hypothetical protein 1781181..1781456 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462534 YP_001421310.1 CDS ymzA NC_009725.1 1781539 1781754 D hypothetical protein YmzA; hypothetical protein 1781539..1781754 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462535 YP_001421311.1 CDS nrdI NC_009725.1 1782014 1782406 D in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF; ribonucleotide reductase stimulatory protein 1782014..1782406 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460895 YP_001421312.1 CDS nrdE NC_009725.1 1782366 1784468 D Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 1782366..1784468 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460896 YP_001421313.1 CDS nrdF NC_009725.1 1784486 1785475 D B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE; ribonucleotide-diphosphate reductase subunit beta 1784486..1785475 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460897 YP_001421314.1 CDS ymaB NC_009725.1 1785524 1786144 D conserved hypothetical protein YmaB; hypothetical protein 1785524..1786144 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460898 YP_001421315.1 CDS cwlC NC_009725.1 1786194 1786952 R sporulation-specific N-acetylmuramoyl-L-alanine amidase CwlC; hypothetical protein complement(1786194..1786952) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460899 YP_001421316.1 CDS spoVK NC_009725.1 1787262 1788227 D spore formation protein SpoVK; hypothetical protein 1787262..1788227 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460900 YP_001421317.1 CDS ynbA NC_009725.1 1788357 1789619 D GTP-binding protein YnbA; hypothetical protein 1788357..1789619 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461170 YP_001421318.1 CDS ynbB NC_009725.1 1789636 1790901 D conserved hypothetical protein YnbB; hypothetical protein 1789636..1790901 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461171 YP_001421319.1 CDS glnR NC_009725.1 1791011 1791415 D glutamine synthetase transcription repressor GlnR; GlnR 1791011..1791415 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461172 YP_001421320.1 CDS glnA NC_009725.1 1791473 1792807 D glutamine synthetase GlnA; hypothetical protein 1791473..1792807 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461173 YP_001421321.1 CDS RBAM_017270 NC_009725.1 1793113 1793382 R hypothetical protein complement(1793113..1793382) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461174 YP_001421322.1 CDS RBAM_017280 NC_009725.1 1793403 1793681 D hypothetical protein 1793403..1793681 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461175 YP_001421323.1 CDS RBAM_017290 NC_009725.1 1793857 1794405 D hypothetical protein 1793857..1794405 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462372 YP_001421324.1 CDS RBAM_017300 NC_009725.1 1794624 1794860 R hypothetical protein complement(1794624..1794860) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462373 YP_001421325.1 CDS RBAM_017310 NC_009725.1 1795191 1796285 R hypothetical protein complement(1795191..1796285) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462374 YP_001421326.1 CDS xynP NC_009725.1 1796850 1798241 D hypothetical symporter; transport of oligosaccharides; hypothetical protein 1796850..1798241 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462375 YP_001421327.1 CDS xynB NC_009725.1 1798284 1799885 D xylan beta-1,4-xylosidase; hypothetical protein 1798284..1799885 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462376 YP_001421328.1 CDS xylR NC_009725.1 1800029 1801183 R xylose operon repressor protein XylR; hypothetical protein complement(1800029..1801183) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462377 YP_001421329.1 CDS xylA NC_009725.1 1801447 1802784 D catalyzes the interconversion of D-xylose to D-xylulose; xylose isomerase 1801447..1802784 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462631 YP_001421330.1 CDS xylB NC_009725.1 1802916 1804415 D xylulose kinase XylB; hypothetical protein 1802916..1804415 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462632 YP_001421331.1 CDS pps NC_009725.1 1804590 1807187 D phosphoenolpyruvate synthase Pps; phosphoenolpyruvate synthase 1804590..1807187 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462633 YP_001421332.1 CDS RBAM_017380 NC_009725.1 1807463 1807945 D hypothetical protein 1807463..1807945 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462634 YP_001421333.1 CDS RBAM_017390 NC_009725.1 1808220 1808510 D hypothetical protein 1808220..1808510 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462635 YP_001421334.1 CDS RBAM_017400 NC_009725.1 1808517 1808939 R hypothetical protein complement(1808517..1808939) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462636 YP_001421335.1 CDS RBAM_017410 NC_009725.1 1809412 1809597 D hypothetical protein 1809412..1809597 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460268 YP_001421336.1 CDS RBAM_017420 NC_009725.1 1809646 1809813 R hypothetical protein complement(1809646..1809813) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460269 YP_001421337.1 CDS RBAM_017430 NC_009725.1 1810064 1810393 D nuclease inhibitor (dinB like protein) 1810064..1810393 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460270 YP_001421338.1 CDS RBAM_017440 NC_009725.1 1810556 1811572 R similar to zinc-dependent eukaryotic ADH enzymes and distinct from fermentative ADHs; alcohol dehydrogenase complement(1810556..1811572) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460271 YP_001421339.1 CDS yoaW NC_009725.1 1811760 1812005 D hypothetical protein YoaW; hypothetical protein 1811760..1812005 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460272 YP_001421340.1 CDS yopD NC_009725.1 1812185 1812601 D hypothetical protein YopD; YopD 1812185..1812601 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460273 YP_001421341.1 CDS yoaP NC_009725.1 1812703 1813464 D hypothetical protein YoaP; hypothetical protein 1812703..1813464 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460763 YP_001421342.1 CDS RBAM_017480 NC_009725.1 1813696 1814238 D hypothetical protein 1813696..1814238 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460764 YP_001421343.1 CDS RBAM_017490 NC_009725.1 1814302 1814754 D hypothetical protein 1814302..1814754 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460765 YP_001421344.1 CDS yoaO NC_009725.1 1814884 1815363 D hypothetical protein YoaO; hypothetical protein 1814884..1815363 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460766 YP_001421345.1 CDS RBAM_017510 NC_009725.1 1815410 1815637 R hypothetical protein complement(1815410..1815637) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460767 YP_001421346.1 CDS ynaE NC_009725.1 1815922 1816542 D hypothetical protein YnaE; hypothetical protein 1815922..1816542 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460768 YP_001421347.1 CDS RBAM_017530 NC_009725.1 1816767 1817840 D hypothetical protein 1816767..1817840 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460174 YP_001421348.1 CDS RBAM_017540 NC_009725.1 1818048 1818668 D chitin binding protein 1818048..1818668 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460175 YP_001421349.1 CDS RBAM_017550 NC_009725.1 1819023 1819313 R hypothetical protein complement(1819023..1819313) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460176 YP_001421350.1 CDS RBAM_017560 NC_009725.1 1819317 1819649 R hypothetical protein complement(1819317..1819649) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460177 YP_001421351.1 CDS RBAM_017570 NC_009725.1 1819712 1820248 R hypothetical protein complement(1819712..1820248) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460178 YP_001421352.1 CDS RBAM_017580 NC_009725.1 1820534 1820719 R hypothetical protein complement(1820534..1820719) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460179 YP_001421353.1 CDS yobO NC_009725.1 1820888 1823305 R conserved hypothetical protein YobO; hypothetical protein complement(1820888..1823305) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460814 YP_001421354.1 CDS yncF NC_009725.1 1823685 1824119 D deoxyuridine 5`-triphosphate pyrophosphatase YncF; hypothetical protein 1823685..1824119 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460815 YP_001421355.1 CDS yndL NC_009725.1 1824529 1825350 D conserved hypothetical protein YndL; hypothetical protein 1824529..1825350 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460816 YP_001421356.1 CDS RBAM_017620 NC_009725.1 1825595 1826425 D hypothetical protein 1825595..1826425 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460817 YP_001421357.1 CDS yndM NC_009725.1 1826453 1826902 R hypothetical protein YndM; hypothetical protein complement(1826453..1826902) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460818 YP_001421358.1 CDS RBAM_017640 NC_009725.1 1827056 1827484 D hypothetical protein 1827056..1827484 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460819 YP_001421359.1 CDS lexA NC_009725.1 1827822 1828442 R Represses a number of genes involved in the response to DNA damage; LexA repressor complement(1827822..1828442) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461606 YP_001421360.1 CDS yneA NC_009725.1 1828599 1828910 D hypothetical protein YneA; cell division suppressor protein YneA 1828599..1828910 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461607 YP_001421361.1 CDS yneB NC_009725.1 1828926 1829576 D conserved hypothetical protein YneB; hypothetical protein 1828926..1829576 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461608 YP_001421362.1 CDS ynzC NC_009725.1 1829645 1829878 D conserved hypothetical protein YnzC; hypothetical protein 1829645..1829878 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461609 YP_001421363.1 CDS tkt NC_009725.1 1830045 1832048 D transketolase Tkt; Tkt 1830045..1832048 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461610 YP_001421364.1 CDS yneE NC_009725.1 1832200 1832646 D hypothetical protein YneE; hypothetical protein 1832200..1832646 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461611 YP_001421365.1 CDS yneF NC_009725.1 1832732 1832950 D conserved hypothetical protein YneF; hypothetical protein 1832732..1832950 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459515 YP_001421366.1 CDS ynzD NC_009725.1 1833024 1833197 R hypothetical protein YnzD; hypothetical protein complement(1833024..1833197) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459516 YP_001421367.1 CDS ccdA NC_009725.1 1833402 1834106 D integral membrane protein cytochrome c-type biogenesis protein CcdA; hypothetical protein 1833402..1834106 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459517 YP_001421368.1 CDS ccdB NC_009725.1 1834191 1834553 D conserved hypothetical protein CcdB; hypothetical protein 1834191..1834553 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459518 YP_001421369.1 CDS ccdC NC_009725.1 1834642 1835124 D conserved hypothetical protein CcdC; CcdC 1834642..1835124 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459519 YP_001421370.1 CDS yneK NC_009725.1 1835152 1835580 R hypothetical protein YneK; hypothetical protein complement(1835152..1835580) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459520 YP_001421371.1 CDS cotM NC_009725.1 1835815 1836186 R spore coat protein M (CotM); CotM complement(1835815..1836186) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460737 YP_001421372.1 CDS sspP NC_009725.1 1836280 1836426 R SASP P; found in forespore compartment; acid-soluble spore protein P complement(1836280..1836426) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460738 YP_001421373.1 CDS sspO NC_009725.1 1836456 1836602 R SASP O; found in forespore compartment; acid-soluble spore protein O complement(1836456..1836602) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460739 YP_001421374.1 CDS citB NC_009725.1 1836834 1839560 D Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 1836834..1839560 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460740 YP_001421375.1 CDS yneN NC_009725.1 1839622 1840131 D conserved hypothetical protein YneN; hypothetical protein 1839622..1840131 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460741 YP_001421376.1 CDS RBAM_017820 NC_009725.1 1840210 1840335 D hypothetical protein 1840210..1840335 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460742 YP_001421377.1 CDS sspN NC_009725.1 1840399 1840545 D SASP N; found in forespore compartment; acid-soluble spore protein N 1840399..1840545 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462053 YP_001421378.1 CDS tlp NC_009725.1 1840570 1840812 D small acid-soluble spore protein (thioredoxin-like protein) Tlp; small acid-soluble spore protein Tlp 1840570..1840812 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462054 YP_001421379.1 CDS yneP NC_009725.1 1840899 1841315 D conserved hypothetical protein YneP; hypothetical protein 1840899..1841315 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462055 YP_001421380.1 CDS yneQ NC_009725.1 1841331 1841630 D hypothetical protein YneQ; hypothetical protein 1841331..1841630 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462056 YP_001421381.1 CDS yneR NC_009725.1 1841664 1841951 R conserved hypothetical protein YneR; hypothetical protein complement(1841664..1841951) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462057 YP_001421382.1 CDS yneS NC_009725.1 1842040 1842621 R involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX; glycerol-3-phosphate acyltransferase PlsY complement(1842040..1842621) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462058 YP_001421383.1 CDS yneT NC_009725.1 1842773 1843180 D conserved hypothetical protein YneT; hypothetical protein 1842773..1843180 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460262 YP_001421384.1 CDS parE NC_009725.1 1843604 1845571 D decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 1843604..1845571 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460263 YP_001421385.1 CDS parC NC_009725.1 1845574 1847997 D decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 1845574..1847997 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460264 YP_001421386.1 CDS RBAM_017920 NC_009725.1 1848049 1848174 R hypothetical protein complement(1848049..1848174) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460265 YP_001421387.1 CDS ynfC NC_009725.1 1848199 1848552 R hypothetical protein YnfC; hypothetical protein complement(1848199..1848552) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460266 YP_001421388.1 CDS alsT NC_009725.1 1848929 1850347 D amino acid carrier protein AlsT; AlsT 1848929..1850347 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460267 YP_001421389.1 CDS RBAM_017950 NC_009725.1 1850551 1851507 D 2-keto-3-deoxygluconokinase 1850551..1851507 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463116 YP_001421390.1 CDS yjmD NC_009725.1 1851537 1852556 D conserved hypothetical protein YjmD; hypothetical protein 1851537..1852556 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463117 YP_001421391.1 CDS kdgA NC_009725.1 1852570 1853205 D 2-keto-3-deoxygluconate-6-phosphate aldolase KdgA; KdgA 1852570..1853205 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463118 YP_001421392.1 CDS uxuA NC_009725.1 1853141 1854283 D catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate; mannonate dehydratase 1853141..1854283 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463119 YP_001421393.1 CDS yjmF NC_009725.1 1854280 1855116 D Converts D-mannonate to D-mannuronate; D-mannonate oxidoreductase 1854280..1855116 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463120 YP_001421394.1 CDS kdgR NC_009725.1 1855200 1856201 D negative transcriptional regulator (LacI family) KdgR; KdgR 1855200..1856201 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463121 YP_001421395.1 CDS exuT NC_009725.1 1856276 1857544 D hexuronate transporter ExuT; ExuT 1856276..1857544 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461829 YP_001421396.1 CDS yndG NC_009725.1 1857666 1858481 D hypothetical protein YndG; hypothetical protein 1857666..1858481 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461830 YP_001421397.1 CDS yndH NC_009725.1 1858494 1858898 D hypothetical protein YndH; hypothetical protein 1858494..1858898 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461831 YP_001421398.1 CDS yndJ NC_009725.1 1858802 1860520 D hypothetical protein YndJ; hypothetical protein 1858802..1860520 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461832 YP_001421399.1 CDS RBAM_018050 NC_009725.1 1860610 1860828 D hypothetical protein 1860610..1860828 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461833 YP_001421400.1 CDS RBAM_018060 NC_009725.1 1860871 1861032 D hypothetical protein 1860871..1861032 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461834 YP_001421401.1 CDS RBAM_018070 NC_009725.1 1861084 1861275 D hypothetical protein 1861084..1861275 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461439 YP_001421402.1 CDS RBAM_018080 NC_009725.1 1861427 1861738 D hypothetical protein 1861427..1861738 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461440 YP_001421403.1 CDS RBAM_018090 NC_009725.1 1862007 1863215 R hypothetical protein complement(1862007..1863215) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461441 YP_001421404.1 CDS bglC NC_009725.1 1863403 1864902 R endo-1,4-beta-glucanase; BglC complement(1863403..1864902) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461442 YP_001421405.1 CDS RBAM_018110 NC_009725.1 1865361 1865672 D hypothetical protein 1865361..1865672 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461443 YP_001421406.1 CDS yvrG NC_009725.1 1865725 1867122 R two-component system sensor histidine kinase; cd00075, HATPase_c,Histidine kinase-like ATPases; hypothetical protein complement(1865725..1867122) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461444 YP_001421407.1 CDS yvrH NC_009725.1 1867125 1867928 R two-component system response regulator; COG0745, OmpR like RR consisting of a CheY-leke receiver domain and a winged-helix-DNA-binding domain [signal transduction mechanism]; hypothetical protein complement(1867125..1867928) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461144 YP_001421408.1 CDS ynfF NC_009725.1 1867976 1869247 R conserved hypothetical protein YnfF; hypothetical protein complement(1867976..1869247) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461145 YP_001421409.1 CDS xynD NC_009725.1 1869309 1870847 R endo-1,4-beta-xylanase D precursor; hypothetical protein complement(1869309..1870847) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461146 YP_001421410.1 CDS bmyC NC_009725.1 1871172 1879031 R nonribosomal synthesis of bacillomycin D; bacillomycin D synthetase C; BmyC complement(1871172..1879031) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461147 YP_001421411.1 CDS bmyB NC_009725.1 1879116 1895207 R nonribosomal synthesis of bacillomycin D; bacillomycin D synthetase B; BmyB complement(1879116..1895207) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461148 YP_001421412.1 CDS bmyA NC_009725.1 1895252 1907200 R nonribosomal synthesis of bacillomycin D; bacillomycin D synthetase A; BmyA complement(1895252..1907200) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461149 YP_001421413.1 CDS bmyD NC_009725.1 1907220 1908422 R nonribosomal synthesis of bacillomycin D; malonyl-CoA transacylase; BmyD complement(1907220..1908422) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462654 YP_001421414.1 CDS yxjF NC_009725.1 1908982 1909767 R catalyzes the formation of acetoacetate from 3-hydroxybutyrate; 3-hydroxybutyrate dehydrogenase complement(1908982..1909767) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462655 YP_001421415.1 CDS scoB NC_009725.1 1909780 1910442 R succinyl CoA:3-oxoacid CoA-transferase (subunit B) ScoB; ScoB complement(1909780..1910442) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462656 YP_001421416.1 CDS scoA NC_009725.1 1910460 1911161 R Succinyl CoA:3-oxoacid CoA-transferase (subunit A) ScoA; ScoA complement(1910460..1911161) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462657 YP_001421417.1 CDS yxjC NC_009725.1 1911186 1912622 R conserved hypothetical protein YxjC; hypothetical protein complement(1911186..1912622) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462658 YP_001421418.1 CDS bioI NC_009725.1 1912927 1914123 R cytochrome P450 enzyme BioI; BioI complement(1912927..1914123) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462659 YP_001421419.1 CDS bioB NC_009725.1 1914125 1915144 R catalyzes the formation of biotin from dethiobiotin and sulfur 2 S-adenosyl-L-methionine; biotin synthase complement(1914125..1915144) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459521 YP_001421420.1 CDS bioD NC_009725.1 1915147 1915848 R DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; dithiobiotin synthetase complement(1915147..1915848) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459522 YP_001421421.1 CDS bioF NC_009725.1 1915845 1917005 R 8-amino-7-oxononanoate synthase BioF; hypothetical protein complement(1915845..1917005) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459523 YP_001421422.1 CDS bioA NC_009725.1 1916995 1918341 R catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate; adenosylmethionine-8-amino-7-oxononanoate aminotransferase complement(1916995..1918341) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459524 YP_001421423.1 CDS bioW NC_009725.1 1918338 1919108 R catalyzes the formation of pimeloyl-CoA from pimelate and coenzyme A; 6-carboxyhexanoate--CoA ligase complement(1918338..1919108) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459525 YP_001421424.1 CDS yngA NC_009725.1 1919385 1919792 D conserved hypothetical protein YngA; hypothetical protein 1919385..1919792 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459526 YP_001421425.1 CDS yngB NC_009725.1 1919799 1920692 D UTP-glucose-1-phosphate uridylytransferase YngB; hypothetical protein 1919799..1920692 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461835 YP_001421426.1 CDS yngC NC_009725.1 1920767 1921357 D conserved hypothetical protein YngC; hypothetical protein 1920767..1921357 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461836 YP_001421427.1 CDS yngE NC_009725.1 1921412 1922941 R propionyl-CoA carboxylase YngE; hypothetical protein complement(1921412..1922941) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461837 YP_001421428.1 CDS yngF NC_009725.1 1922959 1923738 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(1922959..1923738) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461838 YP_001421429.1 CDS yngG NC_009725.1 1923752 1924651 R catalyzes the formation of acetoacetate and acetyl-CoA from 3-hydroxy-3-methylglutaryl-CoA; hydroxymethylglutaryl-CoA lyase complement(1923752..1924651) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461839 YP_001421430.1 CDS RBAM_018360 NC_009725.1 1924667 1924879 R composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit complement(1924667..1924879) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461840 YP_001421431.1 CDS yngH NC_009725.1 1924876 1926225 R an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit complement(1924876..1926225) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460033 YP_001421432.1 CDS yngI NC_009725.1 1926247 1927887 R activates fatty acids by binding to coenzyme A; AMP-binding protein complement(1926247..1927887) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460034 YP_001421433.1 CDS yngJ NC_009725.1 1927933 1929075 R Acyl-CoA dehydrogenase YngJ; hypothetical protein complement(1927933..1929075) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460035 YP_001421434.1 CDS yngK NC_009725.1 1929215 1930753 R conserved hypothetical protein YngK; hypothetical protein complement(1929215..1930753) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460036 YP_001421435.1 CDS yngL NC_009725.1 1930875 1931306 R conserved hypothetical protein YngL; hypothetical protein complement(1930875..1931306) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460037 YP_001421436.1 CDS fenE NC_009725.1 1931328 1935131 R nonribosomal fengycin synthesis; COG1020; fengycin synthetase E; FenE complement(1931328..1935131) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460038 YP_001421437.1 CDS fenD NC_009725.1 1935150 1945925 R nonribosomal fengycin synthesis; COG1020; fengycin synthetase D; FenD complement(1935150..1945925) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459676 YP_001421438.1 CDS fenC NC_009725.1 1945951 1953600 R nonribosomal fengycin synthesis; COG1020; fengycin synthetase C; FenC complement(1945951..1953600) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459677 YP_001421439.1 CDS fenB NC_009725.1 1953616 1961313 R nonribosomal fengycin synthesis; COG1020; fengycin synthetase B; FenB complement(1953616..1961313) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459678 YP_001421440.1 CDS fenA NC_009725.1 1961339 1968997 R nonribosomal fengycin synthesis; COG1020; fengycin synthetase A; FenA complement(1961339..1968997) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459679 YP_001421441.1 CDS dacC NC_009725.1 1969478 1970953 R penicillin-binding protein DacC; hypothetical protein complement(1969478..1970953) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459680 YP_001421442.1 CDS yoxA NC_009725.1 1970972 1971940 R conserved hypothetical protein YoxA; hypothetical protein complement(1970972..1971940) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459681 YP_001421443.1 CDS yoeA NC_009725.1 1972055 1973443 R conserved hypothetical protein YoeA; hypothetical protein complement(1972055..1973443) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459900 YP_001421444.1 CDS yoeB NC_009725.1 1973672 1974214 D hypothetical protein YoeB; hypothetical protein 1973672..1974214 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459901 YP_001421445.1 CDS RBAM_018520 NC_009725.1 1974475 1975020 R phage integrase family site specific recombinase complement(1974475..1975020) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459903 YP_001421446.1 CDS yoeD NC_009725.1 1975336 1975566 R hypothetical protein YoeD; hypothetical protein complement(1975336..1975566) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459904 YP_001421447.1 CDS ggt NC_009725.1 1975810 1977585 D gamma-glutamyltranspeptidase; upregulated by plant exudate; Ggt 1975810..1977585 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460934 YP_001421448.1 CDS ybcL NC_009725.1 1977632 1978807 R conserved hypothetical protein YbcL; hypothetical protein complement(1977632..1978807) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460935 YP_001421449.1 CDS RBAM_018560 NC_009725.1 1978952 1979254 R hypothetical protein complement(1978952..1979254) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460936 YP_001421450.1 CDS RBAM_018570 NC_009725.1 1979286 1979459 R hypothetical protein complement(1979286..1979459) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460937 YP_001421451.1 CDS yofA NC_009725.1 1979581 1980447 R transcriptional regulator YofA; hypothetical protein complement(1979581..1980447) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460938 YP_001421452.1 CDS yogA NC_009725.1 1980563 1981546 D alcohol dehydrogenase YogA; hypothetical protein 1980563..1981546 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460939 YP_001421453.1 CDS RBAM_018600 NC_009725.1 1981573 1981773 R hypothetical protein complement(1981573..1981773) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462803 YP_001421454.1 CDS gltD NC_009725.1 1981869 1983350 R glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta complement(1981869..1983350) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462804 YP_001421455.1 CDS gltA NC_009725.1 1983367 1987926 R glutamate synthase [NADPH] large subunit GltA; GltA complement(1983367..1987926) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462805 YP_001421456.1 CDS gltC NC_009725.1 1988072 1988974 D HTH-type transcriptional regulator GltC; GltC 1988072..1988974 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462806 YP_001421457.1 CDS proJ NC_009725.1 1989035 1990153 R catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase complement(1989035..1990153) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462807 YP_001421458.1 CDS proH NC_009725.1 1990178 1991059 R pyrroline-5-carboxylate reductase ProH; ProH complement(1990178..1991059) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462808 YP_001421459.1 CDS rtp NC_009725.1 1991212 1991589 R replication terminator protein Rtp; Rtp complement(1991212..1991589) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461763 YP_001421460.1 CDS RBAM_018670 NC_009725.1 1992012 1992440 D GNAT family acetyltransferase 1992012..1992440 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461764 YP_001421461.1 CDS RBAM_018680 NC_009725.1 1992581 1992874 D transposase RBAM 1992581..1992874 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461765 YP_001421462.1 CDS RBAM_018690 NC_009725.1 1993335 1994105 D dehydrogenase 1993335..1994105 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461766 YP_001421463.1 CDS RBAM_018700 NC_009725.1 1994245 1995450 R hypothetical protein complement(1994245..1995450) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461767 YP_001421464.1 CDS fabG NC_009725.1 1995803 1996528 R Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase complement(1995803..1996528) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461768 YP_001421465.1 CDS yoxC NC_009725.1 1996649 1996954 D conserved hypothetical protein YoxC; hypothetical protein 1996649..1996954 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462237 YP_001421466.1 CDS yoxB NC_009725.1 1997020 1997781 D hypothetical protein YoxB; hypothetical protein 1997020..1997781 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462238 YP_001421467.1 CDS yoaB NC_009725.1 1997896 1999062 R conserved hypothetical protein YoaB; hypothetical protein complement(1997896..1999062) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462239 YP_001421468.1 CDS yoaC NC_009725.1 1999110 2000576 R xylulokinase YoaC; hypothetical protein complement(1999110..2000576) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462240 YP_001421469.1 CDS yoaD NC_009725.1 2000569 2001585 R phosphoglycerate dehydrogenase YoaD; hypothetical protein complement(2000569..2001585) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462241 YP_001421470.1 CDS yoaE NC_009725.1 2001947 2003995 D formate dehydrogenase YoaE; hypothetical protein 2001947..2003995 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462242 YP_001421471.1 CDS yoaF NC_009725.1 2004130 2004357 D hypothetical protein YoaF; hypothetical protein 2004130..2004357 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462411 YP_001421472.1 CDS RBAM_018790 NC_009725.1 2004401 2004625 R hypothetical protein complement(2004401..2004625) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462412 YP_001421473.1 CDS RBAM_018800 NC_009725.1 2004810 2005400 D transcriptional regulator 2004810..2005400 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462413 YP_001421474.1 CDS RBAM_018810 NC_009725.1 2005393 2005674 D hypothetical protein 2005393..2005674 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462414 YP_001421475.1 CDS yobK NC_009725.1 2005714 2006178 R hypothetical protein YobK; hypothetical protein complement(2005714..2006178) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462415 YP_001421476.1 CDS yobL NC_009725.1 2006192 2007991 R hypothetical protein YobL; hypothetical protein complement(2006192..2007991) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462416 YP_001421477.1 CDS csaA NC_009725.1 2008322 2008654 R molecular chaperone CsaA; hypothetical protein complement(2008322..2008654) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462118 YP_001421478.1 CDS yobQ NC_009725.1 2008723 2009433 R transcriptional regulator YobQ; hypothetical protein complement(2008723..2009433) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462119 YP_001421479.1 CDS yobS NC_009725.1 2009485 2010051 R hypothetical protein YobS; hypothetical protein complement(2009485..2010051) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462120 YP_001421480.1 CDS yobT NC_009725.1 2010051 2010770 R conserved hypothetical protein YobT; hypothetical protein complement(2010051..2010770) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462121 YP_001421481.1 CDS yobW NC_009725.1 2010995 2011516 D hypothetical protein YobW; hypothetical protein 2010995..2011516 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462122 YP_001421482.1 CDS yozA NC_009725.1 2011546 2011878 R transcriptional regulator YozA; hypothetical protein complement(2011546..2011878) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462123 YP_001421483.1 CDS yocA NC_009725.1 2012070 2012735 D conserved hypothetical protein YocA; hypothetical protein 2012070..2012735 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461093 YP_001421484.1 CDS yozB NC_009725.1 2012800 2013336 R conserved hypothetical protein YozB; hypothetical protein complement(2012800..2013336) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461094 YP_001421485.1 CDS yocB NC_009725.1 2013481 2014266 R hypothetical protein YocB; hypothetical protein complement(2013481..2014266) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461095 YP_001421486.1 CDS yocC NC_009725.1 2014461 2014958 D hypothetical protein YocC; hypothetical protein 2014461..2014958 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461096 YP_001421487.1 CDS yocD NC_009725.1 2015022 2015999 D conserved hypothetical protein YocD; hypothetical protein 2015022..2015999 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461097 YP_001421488.1 CDS RBAM_018950 NC_009725.1 2016031 2016423 R hypothetical protein complement(2016031..2016423) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461098 YP_001421489.1 CDS yocH NC_009725.1 2016586 2017455 R cell-wall binding protein YocH; hypothetical protein complement(2016586..2017455) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459829 YP_001421490.1 CDS yocI NC_009725.1 2017691 2019469 R ATP-dependent DNA helicase YocI; hypothetical protein complement(2017691..2019469) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459830 YP_001421491.1 CDS yocL NC_009725.1 2019483 2019986 R hypothetical protein YocL; hypothetical protein complement(2019483..2019986) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459831 YP_001421492.1 CDS RBAM_018990 NC_009725.1 2020079 2020312 D hypothetical protein 2020079..2020312 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459832 YP_001421493.1 CDS yocM NC_009725.1 2020299 2020781 R hypothetical protein YocM; hypothetical protein complement(2020299..2020781) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459833 YP_001421494.1 CDS yozN NC_009725.1 2020852 2021124 D hypothetical protein YozN; hypothetical protein 2020852..2021124 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459834 YP_001421495.1 CDS yocN NC_009725.1 2021121 2021354 D hypothetical protein YocN; hypothetical protein 2021121..2021354 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461969 YP_001421496.1 CDS yozO NC_009725.1 2021399 2021743 R hypothetical protein YozO; hypothetical protein complement(2021399..2021743) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461970 YP_001421497.1 CDS RBAM_019040 NC_009725.1 2022037 2022177 R hypothetical protein complement(2022037..2022177) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461971 YP_001421498.1 CDS yozC NC_009725.1 2022243 2022446 R hypothetical protein YozC; hypothetical protein complement(2022243..2022446) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461972 YP_001421499.1 CDS dhaS NC_009725.1 2022630 2024117 D indol 3-acet-aldehyde dehydrogenase; involved in Trp dependent IAA synthesis. Mutant dhaS was found impaired in IAA synthesis and plant growth promotion; DhaS 2022630..2024117 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461973 YP_001421500.1 CDS sqhC NC_009725.1 2024214 2026097 D squalene-hopene cyclase SqhC; SqhC 2024214..2026097 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461974 YP_001421501.1 CDS sodF NC_009725.1 2026094 2026939 D superoxide dismutase SodF; SodF 2026094..2026939 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461913 YP_001421502.1 CDS yocR NC_009725.1 2026979 2028316 R sodium-dependent transporter YocR; hypothetical protein complement(2026979..2028316) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461914 YP_001421503.1 CDS yocS NC_009725.1 2028520 2029494 D sodium-dependent transporter YocS; hypothetical protein 2028520..2029494 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461915 YP_001421504.1 CDS RBAM_019110 NC_009725.1 2029527 2030273 R hypothetical protein complement(2029527..2030273) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461916 YP_001421505.1 CDS odhB NC_009725.1 2030347 2031594 R component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA; dihydrolipoamide succinyltransferase complement(2030347..2031594) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461917 YP_001421506.1 CDS sucA NC_009725.1 2031610 2034444 R SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 complement(2031610..2034444) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461918 YP_001421507.1 CDS yojO NC_009725.1 2034672 2036588 R conserved hypothetical protein YojO; hypothetical protein complement(2034672..2036588) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460856 YP_001421508.1 CDS yojN NC_009725.1 2036599 2037489 R nitric-oxide reductase YojN; hypothetical protein complement(2036599..2037489) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460857 YP_001421509.1 CDS yojM NC_009725.1 2037567 2038157 R superoxide dismutase YojM; hypothetical protein complement(2037567..2038157) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460858 YP_001421510.1 CDS yojL NC_009725.1 2038238 2039479 R conserved hypothetical protein YojL; hypothetical protein complement(2038238..2039479) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460859 YP_001421511.1 CDS yojK NC_009725.1 2039800 2041011 R macrolide glucosyltransferase YojK; hypothetical protein complement(2039800..2041011) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460860 YP_001421512.1 CDS yojJ NC_009725.1 2041130 2041756 R conserved hypothetical protein YojJ; hypothetical protein complement(2041130..2041756) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460861 YP_001421513.1 CDS yojI NC_009725.1 2042034 2043392 D NorM; MdtK; functions as a Na(+)/drug antiporter; inactivation in Vibrio cholerae results in susceptibility to fluoroquinolones; multidrug efflux protein 2042034..2043392 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462939 YP_001421514.1 CDS yojH NC_009725.1 2043406 2044254 D conserved hypothetical protein YojH; hypothetical protein 2043406..2044254 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462940 YP_001421515.1 CDS yojG NC_009725.1 2044282 2044947 R conserved hypothetical protein YojG; hypothetical protein complement(2044282..2044947) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462941 YP_001421516.1 CDS yojF NC_009725.1 2044965 2045315 R conserved hypothetical protein YojF; hypothetical protein complement(2044965..2045315) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462942 YP_001421517.1 CDS RBAM_019240 NC_009725.1 2045312 2045590 R hypothetical protein complement(2045312..2045590) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462943 YP_001421518.1 CDS yojE NC_009725.1 2045658 2046554 R hypothetical protein YojE; hypothetical protein complement(2045658..2046554) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462944 YP_001421519.1 CDS yozR NC_009725.1 2046652 2047116 D hypothetical protein YozR; hypothetical protein 2046652..2047116 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460724 YP_001421520.1 CDS RBAM_019270 NC_009725.1 2047152 2047391 R hypothetical protein complement(2047152..2047391) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460725 YP_001421521.1 CDS yodA NC_009725.1 2047594 2047983 D conserved hypothetical protein YodA; hypothetical protein 2047594..2047983 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460726 YP_001421522.1 CDS yoaQ NC_009725.1 2048036 2048404 D hypothetical protein YoaQ; hypothetical protein 2048036..2048404 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460727 YP_001421523.1 CDS yodB NC_009725.1 2048444 2048785 R conserved hypothetical protein YodB; hypothetical protein complement(2048444..2048785) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460728 YP_001421524.1 CDS yodC NC_009725.1 2048912 2049523 D nitroreductase YodC; hypothetical protein 2048912..2049523 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460729 YP_001421525.1 CDS yodD NC_009725.1 2049567 2050172 R conserved hypothetical protein YodD; hypothetical protein complement(2049567..2050172) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459835 YP_001421526.1 CDS yodE NC_009725.1 2050172 2051095 R conserved hypothetical protein YodE; hypothetical protein complement(2050172..2051095) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459836 YP_001421527.1 CDS yodF NC_009725.1 2051481 2052971 D proline permease homolog YodF; hypothetical protein 2051481..2052971 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459837 YP_001421528.1 CDS RBAM_019350 NC_009725.1 2053015 2054484 R hypothetical protein complement(2053015..2054484) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459838 YP_001421529.1 CDS bglA NC_009725.1 2054632 2056074 R 6-phospho-beta-glucosidase BglA; BglA complement(2054632..2056074) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459839 YP_001421530.1 CDS yydK NC_009725.1 2056324 2057049 D transcriptional regulator YydK; hypothetical protein 2056324..2057049 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459840 YP_001421531.1 CDS ctpA NC_009725.1 2057110 2058513 R carboxy-terminal processing protease CtpA; hypothetical protein complement(2057110..2058513) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461850 YP_001421532.1 CDS yodH NC_009725.1 2058660 2059361 D conserved hypothetical protein YodH; hypothetical protein 2058660..2059361 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461851 YP_001421533.1 CDS yodI NC_009725.1 2059454 2059705 D hypothetical protein YodI; hypothetical protein 2059454..2059705 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461852 YP_001421534.1 CDS yodJ NC_009725.1 2059749 2060567 R D-alanyl-D-alanine carboxypeptidase YodJ; hypothetical protein complement(2059749..2060567) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461853 YP_001421535.1 CDS deoD NC_009725.1 2060651 2061349 R catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate; purine nucleoside phosphorylase complement(2060651..2061349) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461854 YP_001421536.1 CDS RBAM_019430 NC_009725.1 2061486 2061611 D hypothetical protein 2061486..2061611 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461855 YP_001421537.1 CDS yodL NC_009725.1 2061666 2061986 R hypothetical protein YodL; hypothetical protein complement(2061666..2061986) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461869 YP_001421538.1 CDS yodM NC_009725.1 2062046 2062657 R conserved hypothetical protein YodM; hypothetical protein complement(2062046..2062657) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461870 YP_001421539.1 CDS yozD NC_009725.1 2062731 2062904 R hypothetical protein YozD; hypothetical protein complement(2062731..2062904) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461871 YP_001421540.1 CDS RBAM_019470 NC_009725.1 2063022 2063165 D hypothetical protein 2063022..2063165 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461872 YP_001421541.1 CDS yodN NC_009725.1 2063162 2063842 R hypothetical protein YodN; hypothetical protein complement(2063162..2063842) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461873 YP_001421542.1 CDS RBAM_019490 NC_009725.1 2064092 2064298 R hypothetical protein complement(2064092..2064298) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461874 YP_001421543.1 CDS yozE NC_009725.1 2064611 2064835 R hypothetical protein YozE; hypothetical protein complement(2064611..2064835) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461737 YP_001421544.1 CDS yokU NC_009725.1 2064910 2065188 R hypothetical protein YokU; hypothetical protein complement(2064910..2065188) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461738 YP_001421545.1 CDS kamA NC_009725.1 2065185 2066606 R L-lysine 2,3-aminomutase KamA; hypothetical protein complement(2065185..2066606) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461739 YP_001421546.1 CDS yodP NC_009725.1 2066603 2067469 R conserved hypothetical protein YodP; hypothetical protein complement(2066603..2067469) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461740 YP_001421547.1 CDS yodQ NC_009725.1 2067438 2068739 R catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine; acetylornithine deacetylase complement(2067438..2068739) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461741 YP_001421548.1 CDS yodR NC_009725.1 2068711 2069406 R coenzyme A transferase , beta subunit YodR; hypothetical protein complement(2068711..2069406) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461742 YP_001421549.1 CDS yodS NC_009725.1 2069391 2070080 R coenzyme A transferase , alpha subunit YodS; hypothetical protein complement(2069391..2070080) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460121 YP_001421550.1 CDS yodT NC_009725.1 2070087 2071418 R aminotransferase class-III protein YodT; hypothetical protein complement(2070087..2071418) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460122 YP_001421551.1 CDS yosT NC_009725.1 2071665 2071880 R conserved hypothetical protein YosT; hypothetical protein complement(2071665..2071880) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460123 YP_001421552.1 CDS cgeE NC_009725.1 2072475 2073296 R spore maturation protein CgeE; CgeE complement(2072475..2073296) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460124 YP_001421553.1 CDS cgeD NC_009725.1 2073293 2074564 R spore maturation protein CgeD; CgeD complement(2073293..2074564) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460125 YP_001421554.1 CDS cgeC NC_009725.1 2074629 2074928 R spore maturation protein CgeC; CgeC complement(2074629..2074928) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460126 YP_001421555.1 CDS cgeA NC_009725.1 2075139 2075570 D spore maturation protein CgeA; CgeA 2075139..2075570 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461709 YP_001421556.1 CDS cgeB NC_009725.1 2075577 2076533 D spore maturation protein CgeB; CgeB 2075577..2076533 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461710 YP_001421557.1 CDS phy NC_009725.1 2076583 2077734 R 3-phytase precursor (Myo-inositol-hexaphosphate 3-phosphohydrolase); Phy complement(2076583..2077734) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461711 YP_001421558.1 CDS yodU NC_009725.1 2078050 2078475 D capsular polysaccharide biosynthesis protein homolog YodU; hypothetical protein 2078050..2078475 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461712 YP_001421559.1 CDS yotN NC_009725.1 2078509 2078685 R conserved hypothetical protein [bacteriophage SPBc2] YotN; hypothetical protein complement(2078509..2078685) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461713 YP_001421560.1 CDS yobA NC_009725.1 2079047 2079400 R hypothetical protein YobA; hypothetical protein complement(2079047..2079400) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461714 YP_001421561.1 CDS RBAM_019680 NC_009725.1 2079403 2079588 R hypothetical protein complement(2079403..2079588) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459613 YP_001421562.1 CDS yorC NC_009725.1 2079672 2079782 R hypothetical protein [bacteriophage SPBc2] YorC; hypothetical protein complement(2079672..2079782) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459614 YP_001421563.1 CDS yoqO NC_009725.1 2080208 2080582 D hypothetical protein [bacteriophage SPBc2] YoqO; hypothetical protein 2080208..2080582 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459615 YP_001421564.1 CDS yoqN NC_009725.1 2080615 2080701 R hypothetical protein [bacteriophage SPBc2] YoqN; hypothetical protein complement(2080615..2080701) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459616 YP_001421565.1 CDS yoqH NC_009725.1 2080816 2081268 R hypothetical protein [bacteriophage SPBc2] YoqH; hypothetical protein complement(2080816..2081268) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459617 YP_001421566.1 CDS rapA1 NC_009725.1 2081538 2082674 D response regulator aspartate phosphatase; prevents sporulation by dephosphorylating RR; RapA1 2081538..2082674 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459618 YP_001421567.1 CDS uvrX NC_009725.1 2082877 2083506 R UV-damage repair protein UvrX; UvrX complement(2082877..2083506) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462988 YP_001421568.1 CDS RBAM_019750 NC_009725.1 2083569 2084981 R hypothetical protein complement(2083569..2084981) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462989 YP_001421569.1 CDS RBAM_019760 NC_009725.1 2085140 2086339 R oxidoreductase complement(2085140..2086339) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462990 YP_001421570.1 CDS RBAM_019770 NC_009725.1 2086586 2087164 R two-component response regulator complement(2086586..2087164) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462991 YP_001421571.1 CDS RBAM_019780 NC_009725.1 2087157 2088230 R two-component sensor histidine kinase complement(2087157..2088230) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462992 YP_001421572.1 CDS yrkJ1 NC_009725.1 2088677 2089204 R conserved membrane protein YrkJ1; hypothetical protein complement(2088677..2089204) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462993 YP_001421573.1 CDS yolB NC_009725.1 2089972 2090112 R hypothetical protein [bacteriophage SPBc2] YolB; hypothetical protein complement(2089972..2090112) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462768 YP_001421574.1 CDS yokK NC_009725.1 2090978 2091538 R hypothetical protein [bacteriophage SPBc2] YokK; hypothetical protein complement(2090978..2091538) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462769 YP_001421575.1 CDS yokI1 NC_009725.1 2091539 2092228 R hypothetical protein [bacteriophage SPBc2] YokI1; hypothetical protein complement(2091539..2092228) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462770 YP_001421576.1 CDS yokA NC_009725.1 2092844 2094511 D site-specific recombinase [bacteriophage SPBc2] YokA; hypothetical protein 2092844..2094511 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462771 YP_001421577.1 CDS ypqP NC_009725.1 2094534 2095124 D conserved hypothetical protein YpqP; hypothetical protein 2094534..2095124 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462772 YP_001421578.1 CDS msrB NC_009725.1 2095165 2095599 R this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress; methionine sulfoxide reductase B complement(2095165..2095599) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462773 YP_001421579.1 CDS msrA NC_009725.1 2095601 2096134 R this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A complement(2095601..2096134) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460039 YP_001421580.1 CDS ypoP NC_009725.1 2096263 2096688 D transcription regulator MarR family YpoP; hypothetical protein 2096263..2096688 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460040 YP_001421581.1 CDS ypmS NC_009725.1 2096739 2097302 R hypothetical protein YpmS; hypothetical protein complement(2096739..2097302) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460041 YP_001421582.1 CDS ypmR NC_009725.1 2097312 2098067 R conserved hypothetical protein YpmR; hypothetical protein complement(2097312..2098067) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460042 YP_001421583.1 CDS ypmQ NC_009725.1 2098145 2098768 R conserved hypothetical protein YpmQ; hypothetical protein complement(2098145..2098768) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460043 YP_001421584.1 CDS ypmP NC_009725.1 2098825 2099076 R conserved hypothetical protein YpmP; hypothetical protein complement(2098825..2099076) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460044 YP_001421585.1 CDS ilvA NC_009725.1 2099168 2100436 R catalyzes the formation of 2-oxobutanoate from L-threonine; biosynthetic; threonine dehydratase complement(2099168..2100436) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461686 YP_001421586.1 CDS yplP NC_009725.1 2100621 2101613 D sigma L dependent transcriptional regulator YplP; hypothetical protein 2100621..2101613 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461687 YP_001421587.1 CDS yplQ NC_009725.1 2101630 2102268 D membrane protein, Hemolysin III homologYplQ; hypothetical protein 2101630..2102268 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461688 YP_001421588.1 CDS ypkP NC_009725.1 2102309 2102932 R hypothetical protein YpkP; hypothetical protein complement(2102309..2102932) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461689 YP_001421589.1 CDS dfrA NC_009725.1 2102954 2103439 R dihydrofolate reductase DfrA; DfrA complement(2102954..2103439) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461690 YP_001421590.1 CDS thyA NC_009725.1 2103436 2104230 R ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase complement(2103436..2104230) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461691 YP_001421591.1 CDS ypjP NC_009725.1 2104330 2104938 R hypothetical protein YpjP; hypothetical protein complement(2104330..2104938) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459545 YP_001421592.1 CDS ypiP NC_009725.1 2105201 2105971 R conserved hypothetical protein YpiP; hypothetical protein complement(2105201..2105971) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459546 YP_001421593.1 CDS yphP NC_009725.1 2106010 2106444 R conserved hypothetical protein YphP; hypothetical protein complement(2106010..2106444) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459547 YP_001421594.1 CDS ilvD NC_009725.1 2106526 2108202 R catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase complement(2106526..2108202) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459548 YP_001421595.1 CDS ypgR NC_009725.1 2108455 2109588 R conserved hypothetical protein YpgR; hypothetical protein complement(2108455..2109588) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459549 YP_001421596.1 CDS ypgQ NC_009725.1 2109622 2110266 R conserved hypothetical protein YpgQ; hypothetical protein complement(2109622..2110266) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459550 YP_001421597.1 CDS bsaA NC_009725.1 2110271 2110759 R glutathione peroxidase BsaA; BsaA complement(2110271..2110759) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461116 YP_001421598.1 CDS metA NC_009725.1 2111043 2111948 D catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis; homoserine O-succinyltransferase 2111043..2111948 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461117 YP_001421599.1 CDS ugtP NC_009725.1 2112173 2113315 D processive; catalyzes the formation of mono-, di- and tri-glucosyldiacylglycerol by the progressive transfer of glucosyl residues to diacylglycerol; involved in the formation of membrane glycolipids; diacylglycerol glucosyltransferase 2112173..2113315 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461118 YP_001421600.1 CDS cspD NC_009725.1 2113536 2113736 D cold shock protein; involved in elicitation plant basal defence; hypothetical protein 2113536..2113736 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461119 YP_001421601.1 CDS degR NC_009725.1 2113788 2113970 R regulatory protein DegR; DegR complement(2113788..2113970) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461120 YP_001421602.1 CDS ypzA NC_009725.1 2114133 2114390 D hypothetical protein YpzA; hypothetical protein 2114133..2114390 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461121 YP_001421603.1 CDS ypeQ NC_009725.1 2114417 2114599 R hypothetical protein YpeQ; hypothetical protein complement(2114417..2114599) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461260 YP_001421604.1 CDS ypeP NC_009725.1 2114602 2115273 R conserved hypothetical protein YpeP; hypothetical protein complement(2114602..2115273) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461261 YP_001421605.1 CDS ypdP NC_009725.1 2115355 2116035 D conserved hypothetical protein YpdP; hypothetical protein 2115355..2116035 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461262 YP_001421606.1 CDS ypdQ NC_009725.1 2116039 2116434 D ribonuclease H YpdQ; hypothetical protein 2116039..2116434 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461263 YP_001421607.1 CDS sspL NC_009725.1 2116486 2116614 D small acid-soluble spore protein SspL; SspL 2116486..2116614 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461264 YP_001421608.1 CDS ypcP NC_009725.1 2116620 2117507 R 5'-3' exonuclease YpcP; hypothetical protein complement(2116620..2117507) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461265 YP_001421609.1 CDS RBAM_020160 NC_009725.1 2117602 2117745 R hypothetical protein complement(2117602..2117745) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461757 YP_001421610.1 CDS ypbS NC_009725.1 2117822 2118079 R hypothetical protein YpbS; hypothetical protein complement(2117822..2118079) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461758 YP_001421611.1 CDS ypbR NC_009725.1 2118148 2121726 R hypothetical protein YpbR; hypothetical protein complement(2118148..2121726) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461759 YP_001421612.1 CDS ypbQ NC_009725.1 2122078 2122584 R conserved hypothetical protein YpbQ; hypothetical protein complement(2122078..2122584) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461760 YP_001421613.1 CDS bcsA NC_009725.1 2122584 2123684 R naringenin-chalcone synthase BcsA; BcsA complement(2122584..2123684) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461761 YP_001421614.1 CDS RBAM_020210 NC_009725.1 2123848 2124456 D hypothetical protein 2123848..2124456 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461762 YP_001421615.1 CDS RBAM_020220 NC_009725.1 2124484 2124792 R hypothetical protein complement(2124484..2124792) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459849 YP_001421616.1 CDS ydfR NC_009725.1 2125805 2126389 D membrane protein YdfR; hypothetical protein 2125805..2126389 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459850 YP_001421617.1 CDS yrdC NC_009725.1 2126640 2127206 R conserved hypothetical protein YrdC; hypothetical protein complement(2126640..2127206) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459851 YP_001421618.1 CDS pbuX NC_009725.1 2128092 2129396 R xanthine permease PbuX; PbuX complement(2128092..2129396) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459852 YP_001421619.1 CDS xpt NC_009725.1 2129393 2129977 R Catalyzes the transfer of the phosphoribosyl moiety from 5-phospho--D-ribosyl-1-pyrophosphate (PRib-PP) to the 6-oxo-guanine and -xanthine; xanthine phosphoribosyltransferase complement(2129393..2129977) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459853 YP_001421620.1 CDS ypwA NC_009725.1 2130309 2131811 R metallocarboxypeptidase YpwA; hypothetical protein complement(2130309..2131811) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459854 YP_001421621.1 CDS ypvA NC_009725.1 2131923 2133842 R probable ATP-dependent helicase YpvA; hypothetical protein complement(2131923..2133842) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463212 YP_001421622.1 CDS yptA NC_009725.1 2133946 2134137 R hypothetical protein YptA; hypothetical protein complement(2133946..2134137) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463213 YP_001421623.1 CDS RBAM_020300 NC_009725.1 2134303 2134455 D hypothetical protein 2134303..2134455 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463214 YP_001421624.1 CDS yqgA NC_009725.1 2134540 2135004 R hypothetical protein YqgA; hypothetical protein complement(2134540..2135004) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463215 YP_001421625.1 CDS ypsC NC_009725.1 2135319 2136467 R conserved hypothetical protein YpsC; hypothetical protein complement(2135319..2136467) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463216 YP_001421626.1 CDS ypsB NC_009725.1 2137001 2137300 R GpsB; guiding PBP1 shuttling; similar to DivIVA; cell division protein GpsB complement(2137001..2137300) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463217 YP_001421627.1 CDS ypsA NC_009725.1 2137380 2137928 R conserved hypothetical protein YpsA; hypothetical protein complement(2137380..2137928) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459551 YP_001421628.1 CDS cotD NC_009725.1 2138017 2138253 R spore coat protein (inner) CotD; CotD complement(2138017..2138253) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459552 YP_001421629.1 CDS yprB NC_009725.1 2138566 2139804 R conserved hypothetical protein YprB; hypothetical protein complement(2138566..2139804) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459553 YP_001421630.1 CDS yprA NC_009725.1 2139824 2142070 R ATP-dependent RNA helicase YprA; hypothetical protein complement(2139824..2142070) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459554 YP_001421631.1 CDS ypqE NC_009725.1 2142169 2142675 R PTS system IIA component YpqE; hypothetical protein complement(2142169..2142675) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459555 YP_001421632.1 CDS ypqA NC_009725.1 2142814 2143227 D conserved hypothetical protein YpqA; hypothetical protein 2142814..2143227 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459556 YP_001421633.1 CDS yppG NC_009725.1 2143257 2143691 R hypothetical protein YppG; hypothetical protein complement(2143257..2143691) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461008 YP_001421634.1 CDS yppF NC_009725.1 2143878 2144060 D hypothetical protein YppF; hypothetical protein 2143878..2144060 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461009 YP_001421635.1 CDS yppE NC_009725.1 2144099 2144467 R hypothetical protein YppE; hypothetical protein complement(2144099..2144467) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461010 YP_001421636.1 CDS yppD NC_009725.1 2144513 2144758 R hypothetical protein YppD; hypothetical protein complement(2144513..2144758) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461011 YP_001421637.1 CDS sspM NC_009725.1 2144964 2145068 D small, acid-soluble spore protein SspM; SspM 2144964..2145068 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461012 YP_001421638.1 CDS yppC NC_009725.1 2145112 2146068 R hypothetical protein YppC; hypothetical protein complement(2145112..2146068) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461013 YP_001421639.1 CDS recU NC_009725.1 2146116 2146724 D functions in homologous recombination, DNA repair, and chromosome segregation; binds preferentially to three- and four-stranded DNA intermediates; introduces specific nick sites in four-stranded DNA substrates; functions similarly to Escherichia coli RuvC; Holliday junction-specific endonuclease 2146116..2146724 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462015 YP_001421640.1 CDS ponA NC_009725.1 2146883 2149546 D penicillin-binding proteins IA/IB PonA; PonA 2146883..2149546 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462016 YP_001421641.1 CDS ypoC NC_009725.1 2149624 2150115 R hypothetical protein YpoC; hypothetical protein complement(2149624..2150115) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462017 YP_001421642.1 CDS nth NC_009725.1 2150112 2150771 R probable endonuclease III (DNA-(apurinic or apyrimidinic site) lyase) Nth; hypothetical protein complement(2150112..2150771) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462018 YP_001421643.1 CDS dnaD NC_009725.1 2150790 2151488 R DNA replication protein DnaD; hypothetical protein complement(2150790..2151488) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462019 YP_001421644.1 CDS asnC NC_009725.1 2151583 2152875 R catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase complement(2151583..2152875) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462020 YP_001421645.1 CDS aspB NC_009725.1 2153010 2154191 R catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase complement(2153010..2154191) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461207 YP_001421646.1 CDS ypmB NC_009725.1 2154214 2154699 R hypothetical protein YpmB; hypothetical protein complement(2154214..2154699) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461208 YP_001421647.1 CDS ypmA NC_009725.1 2154709 2154879 R hypothetical protein YpmA; hypothetical protein complement(2154709..2154879) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461209 YP_001421648.1 CDS dinG NC_009725.1 2155027 2157813 R unwinds DNA; bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon complement(2155027..2157813) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461210 YP_001421649.1 CDS panD NC_009725.1 2157935 2158318 R Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase complement(2157935..2158318) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461211 YP_001421650.1 CDS panC NC_009725.1 2158320 2159180 R catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase complement(2158320..2159180) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461212 YP_001421651.1 CDS panB NC_009725.1 2159184 2160017 R catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase complement(2159184..2160017) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461377 YP_001421652.1 CDS birA NC_009725.1 2160262 2161239 R bifunctional protein birA; includes: Biotin operon repressor; Biotin- [acetyl-CoA-carboxylase] synthetase BirA; hypothetical protein complement(2160262..2161239) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461378 YP_001421653.1 CDS cca NC_009725.1 2161224 2162414 R catalyzes the addition and repair of the 3'-terminal CCA sequence in tRNA; these proteins belong to the CCA-adding enzyme subfamily 2 which does not have phosphohydrolase activity; tRNA CCA-pyrophosphorylase complement(2161224..2162414) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461379 YP_001421654.1 CDS ypjH NC_009725.1 2162419 2163552 R glycosyl transferase YpjH; hypothetical protein complement(2162419..2163552) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461380 YP_001421655.1 CDS ypjG NC_009725.1 2163549 2164262 R conserved hypothetical protein YpjG; hypothetical protein complement(2163549..2164262) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461381 YP_001421656.1 CDS mgsA NC_009725.1 2164255 2164668 R catalyzes the formation of methylglyoxal from glycerone phosphate; methylglyoxal synthase complement(2164255..2164668) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461382 YP_001421657.1 CDS dapB NC_009725.1 2164692 2165495 R catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase complement(2164692..2165495) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461680 YP_001421658.1 CDS ypjD NC_009725.1 2165504 2165839 R conserved hypothetical protein YpjD; hypothetical protein complement(2165504..2165839) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461681 YP_001421659.1 CDS ypjC NC_009725.1 2165982 2166854 D conserved hypothetical protein YpjC; hypothetical protein 2165982..2166854 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461682 YP_001421660.1 CDS oxdC1 NC_009725.1 2166878 2168053 R oxalate decarboxylase OxdC1; OxdC1 complement(2166878..2168053) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461683 YP_001421661.1 CDS ypjB NC_009725.1 2168083 2168865 R hypothetical protein YpjB; hypothetical protein complement(2168083..2168865) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461684 YP_001421662.1 CDS ypjA NC_009725.1 2168933 2169562 R conserved hypothetical protein YpjA; hypothetical protein complement(2168933..2169562) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461685 YP_001421663.1 CDS qcrC NC_009725.1 2169634 2170401 R menaquinol-cytochrome c oxidoreductase (cytochrome b/c subunit) QcrC; QcrC complement(2169634..2170401) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462608 YP_001421664.1 CDS qcrB NC_009725.1 2170433 2171107 R electron transport protein; cytochrome b6 complement(2170433..2171107) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462609 YP_001421665.1 CDS qcrA NC_009725.1 2171109 2171612 R menaquinol-cytochrome c reductase iron-sulfur subunit (Rieske iron-sulfur protein) QcrA; QcrA complement(2171109..2171612) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462610 YP_001421666.1 CDS ypiF NC_009725.1 2171750 2172196 R hypothetical protein YpiF; hypothetical protein complement(2171750..2172196) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462611 YP_001421667.1 CDS ypiB NC_009725.1 2172251 2172790 R hypothetical protein YpiB; hypothetical protein complement(2172251..2172790) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462612 YP_001421668.1 CDS ypiA NC_009725.1 2172864 2174135 R conserved hypothetical protein YpiA; hypothetical protein complement(2172864..2174135) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462613 YP_001421669.1 CDS aroE NC_009725.1 2174451 2175737 R catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase complement(2174451..2175737) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460940 YP_001421670.1 CDS tyrA NC_009725.1 2175749 2176855 R catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate; prephenate dehydrogenase complement(2175749..2176855) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460941 YP_001421671.1 CDS hisC NC_009725.1 2176916 2177998 R catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase complement(2176916..2177998) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460942 YP_001421672.1 CDS trpA NC_009725.1 2178010 2178807 R catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha complement(2178010..2178807) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460943 YP_001421673.1 CDS trpB NC_009725.1 2178800 2180002 R catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta complement(2178800..2180002) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460944 YP_001421674.1 CDS trpF NC_009725.1 2179983 2180636 R catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis; N-(5'-phosphoribosyl)anthranilate isomerase complement(2179983..2180636) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460945 YP_001421675.1 CDS trpC NC_009725.1 2180641 2181393 R involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; indole-3-glycerol-phosphate synthase complement(2180641..2181393) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462028 YP_001421676.1 CDS trpD NC_009725.1 2181386 2182402 R Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase complement(2181386..2182402) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462029 YP_001421677.1 CDS trpE NC_009725.1 2182374 2183921 R with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I complement(2182374..2183921) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462030 YP_001421678.1 CDS aroH NC_009725.1 2184166 2184528 R chorismate mutase (isozymes 1 and 2) AroH; hypothetical protein complement(2184166..2184528) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462031 YP_001421679.1 CDS aroB NC_009725.1 2184525 2185613 R catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase complement(2184525..2185613) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462032 YP_001421680.1 CDS aroF NC_009725.1 2185613 2186785 R catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase complement(2185613..2186785) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462033 YP_001421681.1 CDS cheR NC_009725.1 2186857 2187627 R methyl-accepting chemotaxis proteins (MCPs) methyltransferase CheR; hypothetical protein complement(2186857..2187627) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462213 YP_001421682.1 CDS ndk NC_009725.1 2187817 2188263 R catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase complement(2187817..2188263) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462214 YP_001421683.1 CDS hepT NC_009725.1 2188385 2189434 R heptaprenyl diphosphate synthase component II HepT; heptaprenyl diphosphate synthase subunit HepT complement(2188385..2189434) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462215 YP_001421684.1 CDS ubiE NC_009725.1 2189376 2190077 R Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase complement(2189376..2190077) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462216 YP_001421685.1 CDS hepS NC_009725.1 2190083 2190847 R heptaprenyl diphosphate synthase component I HepS; HepS complement(2190083..2190847) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462217 YP_001421686.1 CDS mtrB NC_009725.1 2190995 2191222 R tryptophan RNA-binding attenuator protein; binds leader Trp transcript causing transcription termination; transcription attenuation protein MtrB complement(2190995..2191222) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462218 YP_001421687.1 CDS folE NC_009725.1 2191243 2191815 R involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I complement(2191243..2191815) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462283 YP_001421688.1 CDS hupA NC_009725.1 2192002 2192280 R DNA-binding protein II HupA; hypothetical protein complement(2192002..2192280) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462284 YP_001421689.1 CDS spoIVA NC_009725.1 2192655 2194166 R stage IV sporulation protein A (SpoIVA); SpoIVA complement(2192655..2194166) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462285 YP_001421690.1 CDS yphF NC_009725.1 2194319 2195053 R hypothetical protein YphF; hypothetical protein complement(2194319..2195053) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462286 YP_001421691.1 CDS yphE NC_009725.1 2195073 2195264 R hypothetical protein YphE; hypothetical protein complement(2195073..2195264) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462287 YP_001421692.1 CDS gpsA NC_009725.1 2195597 2196634 R catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase complement(2195597..2196634) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462288 YP_001421693.1 CDS engA NC_009725.1 2196652 2197962 R EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA complement(2196652..2197962) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462248 YP_001421694.1 CDS yphA NC_009725.1 2198155 2198757 R conserved hypothetical protein YphA; hypothetical protein complement(2198155..2198757) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462249 YP_001421695.1 CDS fni NC_009725.1 2199000 2200049 R catalyzes the isomerization of isopentenyl pyrophosphate to dimethylallyl diphosphate; isopentenyl pyrophosphate isomerase complement(2199000..2200049) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462250 YP_001421696.1 CDS rpsA NC_009725.1 2200064 2201212 R in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 complement(2200064..2201212) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462251 YP_001421697.1 CDS cmk NC_009725.1 2201440 2202114 R Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase complement(2201440..2202114) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462252 YP_001421698.1 CDS ypfB NC_009725.1 2202193 2202369 R hypothetical protein YpfB; hypothetical protein complement(2202193..2202369) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462253 YP_001421699.1 CDS ypeB NC_009725.1 2203160 2204509 R sporulation protein YpeB; hypothetical protein complement(2203160..2204509) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460381 YP_001421700.1 CDS sleB NC_009725.1 2204534 2205403 R spore cortex-lytic enzyme SleB; hypothetical protein complement(2204534..2205403) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460382 YP_001421701.1 CDS ypdC NC_009725.1 2205534 2206190 R conserved hypothetical protein YpdC; hypothetical protein complement(2205534..2206190) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460383 YP_001421702.1 CDS ypdA NC_009725.1 2206287 2207270 R hypothetical protein YpdA; hypothetical protein complement(2206287..2207270) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460384 YP_001421703.1 CDS gudB NC_009725.1 2207376 2208650 R NAD-specific glutamate dehydrogenase GudB; GudB complement(2207376..2208650) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460000 YP_001421704.1 CDS mecB NC_009725.1 2208811 2209395 R enables recognition and targeting of proteins for proteolysis, involved in negative regulation of competence; adaptor protein complement(2208811..2209395) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460001 YP_001421705.1 CDS ypbG NC_009725.1 2209547 2210335 R conserved hypothetical protein YpbG; hypothetical protein complement(2209547..2210335) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460002 YP_001421706.1 CDS ypbF NC_009725.1 2210422 2210880 R hypothetical protein YpbF; hypothetical protein complement(2210422..2210880) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460003 YP_001421707.1 CDS ypbE NC_009725.1 2210949 2211707 R conserved hypothetical protein YpbE; hypothetical protein complement(2210949..2211707) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460004 YP_001421708.1 CDS ypbD NC_009725.1 2211685 2212239 R conserved hypothetical protein YpbD; hypothetical protein complement(2211685..2212239) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460005 YP_001421709.1 CDS recQ NC_009725.1 2212287 2213777 R ATP-dependent DNA helicase RecQ; RecQ complement(2212287..2213777) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462100 YP_001421710.1 CDS ypbB NC_009725.1 2213770 2214828 R conserved hypothetical protein YpbB; hypothetical protein complement(2213770..2214828) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462101 YP_001421711.1 CDS fer NC_009725.1 2215097 2215345 D ferredoxxin Fer; hypothetical protein 2215097..2215345 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462102 YP_001421712.1 CDS ypaA NC_009725.1 2215485 2216057 R conserved hypothetical protein YpaA; hypothetical protein complement(2215485..2216057) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462103 YP_001421713.1 CDS ypzE NC_009725.1 2216226 2216321 R hypothetical protein YpzE; hypothetical protein complement(2216226..2216321) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462104 YP_001421714.1 CDS serA NC_009725.1 2216546 2218123 D catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 2216546..2218123 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462105 YP_001421715.1 CDS rsiX NC_009725.1 2218170 2219273 R sigma-X negative effector RsiX; RsiX complement(2218170..2219273) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460477 YP_001421716.1 CDS sigX NC_009725.1 2219209 2219793 R Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; in B. subtilis has been shown to regulate cell envelope modification and may effect antibiotic resistance; RNA polymerase sigma factor SigX complement(2219209..2219793) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460478 YP_001421717.1 CDS resE NC_009725.1 2219984 2221765 R two component sensor histidine kinase; COG5002; global regulation of aerobic and anaerobic respiration; transcription control of biofilm formation; ResE complement(2219984..2221765) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460479 YP_001421718.1 CDS resD NC_009725.1 2221762 2222484 R two-component response regulator; COG0745, OmpR like; RR consisting of a CheY like receiver domain and a winged helix DNA-binding domain; global regulation of aerobic and anaerobic re3spiration; hypothetical protein complement(2221762..2222484) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460480 YP_001421719.1 CDS resC NC_009725.1 2222566 2223522 R cytochrome c-type synthesis protein ResC; ResC complement(2222566..2223522) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460481 YP_001421720.1 CDS resB NC_009725.1 2223760 2225388 R protein required for cytochrome c synthesis ResB; ResB complement(2223760..2225388) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460482 YP_001421721.1 CDS resA NC_009725.1 2225385 2225924 R catalyzes the reduction of the disulfide bonds in the heme binding site of apocytochrome c; thiol-disulfide oxidoreductase complement(2225385..2225924) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460305 YP_001421722.1 CDS rluB NC_009725.1 2226009 2226743 R ribosomal large subunit pseudouridine synthase B (RluB); RluB complement(2226009..2226743) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460306 YP_001421723.1 CDS spmB NC_009725.1 2226837 2227373 R spore maturation protein SpmB; hypothetical protein complement(2226837..2227373) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460307 YP_001421724.1 CDS spmA NC_009725.1 2227378 2227968 R spore maturation protein SpmA; hypothetical protein complement(2227378..2227968) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460308 YP_001421725.1 CDS dacB NC_009725.1 2227956 2229107 R D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) DacB; DacB complement(2227956..2229107) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460309 YP_001421726.1 CDS ypuI NC_009725.1 2229220 2229750 R hypothetical protein YpuI; hypothetical protein complement(2229220..2229750) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460310 YP_001421727.1 CDS scpB NC_009725.1 2229795 2230388 R segregation and condensation protein B (ScpB); ScpB complement(2229795..2230388) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462553 YP_001421728.1 CDS scpA NC_009725.1 2230378 2231133 R functions during chromosome segregation; may form a condensin-like structure with SMC and ScpB; segregation and condensation protein A complement(2230378..2231133) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462554 YP_001421729.1 CDS ypuF NC_009725.1 2231519 2232040 D conserved hypothetical protein YpuF; hypothetical protein 2231519..2232040 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462555 YP_001421730.1 CDS ribTD NC_009725.1 2232106 2232480 R protein involved in riboflavin biosynthesis RibTD; RibTD complement(2232106..2232480) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462556 YP_001421731.1 CDS ribH NC_009725.1 2232597 2233061 R RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase complement(2232597..2233061) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462557 YP_001421732.1 CDS ribA NC_009725.1 2233094 2234290 R bifunctional enzyme DHBP synthase/GTP cyclohydrolase II; functions in riboflavin synthesis; converts GTP to 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine; converts ribulose 5-phopshate to 3,4-dihydroxy-2-butanone 4-phosphate; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein complement(2233094..2234290) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462558 YP_001421733.1 CDS ribE NC_009725.1 2234305 2234952 R catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha complement(2234305..2234952) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462571 YP_001421734.1 CDS ribD NC_009725.1 2234933 2236048 R riboflavin-specific deaminase RibD; hypothetical protein complement(2234933..2236048) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462572 YP_001421735.1 CDS ypuD NC_009725.1 2236446 2236790 R hypothetical protein YpuD; hypothetical protein complement(2236446..2236790) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462573 YP_001421736.1 CDS sipS NC_009725.1 2237038 2237598 R type I signal peptidase SipS; SipS complement(2237038..2237598) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462574 YP_001421737.1 CDS RBAM_021450 NC_009725.1 2237694 2238185 R hypothetical protein complement(2237694..2238185) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462575 YP_001421738.1 CDS ppiB NC_009725.1 2238335 2238766 R peptidyl-prolyl cis-trans isomerase B (PpiB); PpiB complement(2238335..2238766) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462576 YP_001421739.1 CDS ypuA NC_009725.1 2239051 2239953 D conserved hypothetical protein YpuA; hypothetical protein 2239051..2239953 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461894 YP_001421740.1 CDS lysA NC_009725.1 2239998 2241317 R diaminopimelate decarboxylase LysA; hypothetical protein complement(2239998..2241317) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461895 YP_001421741.1 CDS spoVAF NC_009725.1 2241442 2242923 R stage V sporulation protein AF (SpoVAF); SpoVAF complement(2241442..2242923) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461896 YP_001421742.1 CDS spoVAE1 NC_009725.1 2242877 2243482 R stage V sporulation protein AE1 (SpoVAE1); SpoVAE1 complement(2242877..2243482) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461897 YP_001421743.1 CDS spoVAE2 NC_009725.1 2243489 2243839 R stage V sporulation protein AE2 (SpoVAE2); SpoVAE2 complement(2243489..2243839) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461898 YP_001421744.1 CDS spoVAD NC_009725.1 2243840 2244856 R stage V sporulation protein AD (SpoVAD); stage V sporulation protein AD complement(2243840..2244856) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461899 YP_001421745.1 CDS spoVAC NC_009725.1 2244868 2245320 R stage V sporulation protein AC (SpoVAC); hypothetical protein complement(2244868..2245320) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462219 YP_001421746.1 CDS spoVAB NC_009725.1 2245333 2245758 R stage V sporulation protein AB (SpoVAB); SpoVAB complement(2245333..2245758) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462220 YP_001421747.1 CDS spoVAA NC_009725.1 2245748 2246368 R stage V sporulation protein AA (SpoVAA); SpoVAA complement(2245748..2246368) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462221 YP_001421748.1 CDS sigF NC_009725.1 2246495 2247262 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed in the prespore at the onset of sporulation. Interaction with spoIIAB inhibits sigma F activity throughout the cell before the formation of the asymmetric septum; after septation the interaction is confined to the mother cell, and sigma F activity is released in the prespore.; sporulation sigma factor SigF complement(2246495..2247262) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462222 YP_001421749.1 CDS spoIIAB NC_009725.1 2247274 2247714 R binds to sigma F preventing its association with RNA polymerase during sporulation; anti-sigma F factor complement(2247274..2247714) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462223 YP_001421750.1 CDS spoIIAA NC_009725.1 2247711 2248064 R anti-sigma F factor antagonist SpoIIAA; hypothetical protein complement(2247711..2248064) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462224 YP_001421751.1 CDS dacF NC_009725.1 2248160 2249329 R penicilin binding protein ( D-alanyl-D-alanine carboxypeptidase) DacF; DacF complement(2248160..2249329) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460579 YP_001421752.1 CDS punA NC_009725.1 2249466 2250284 R catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation; purine nucleoside phosphorylase complement(2249466..2250284) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460580 YP_001421753.1 CDS drm NC_009725.1 2250296 2251483 R catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose; phosphopentomutase complement(2250296..2251483) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460581 YP_001421754.1 CDS xerD NC_009725.1 2251648 2252538 R site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerD complement(2251648..2252538) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460582 YP_001421755.1 CDS RBAM_021630 NC_009725.1 2252546 2252773 R hypothetical protein complement(2252546..2252773) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460583 YP_001421756.1 CDS fur NC_009725.1 2252889 2253338 R ferric uptake regulation protein Fur; hypothetical protein complement(2252889..2253338) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460584 YP_001421757.1 CDS spoIIM NC_009725.1 2253451 2254095 R stage II sporulation protein M (SpoIIM); hypothetical protein complement(2253451..2254095) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461002 YP_001421758.1 CDS yqkK NC_009725.1 2254172 2254399 R hypothetical protein YqkK; hypothetical protein complement(2254172..2254399) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461003 YP_001421759.1 CDS RBAM_021670 NC_009725.1 2254456 2254746 R hypothetical protein complement(2254456..2254746) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461004 YP_001421760.1 CDS mleA NC_009725.1 2254859 2256172 R malolactic enzyme MleA; MleA complement(2254859..2256172) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461005 YP_001421761.1 CDS mleN NC_009725.1 2256185 2257591 R malate-H+/Na+-lactate antiporter MleN; MleN complement(2256185..2257591) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461006 YP_001421762.1 CDS aspA NC_009725.1 2257733 2259160 R catalyzes the formation of fumarate from aspartate; aspartate ammonia-lyase complement(2257733..2259160) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461007 YP_001421763.1 CDS ansA NC_009725.1 2259198 2260187 R L-asparaginase AnsA; AnsA complement(2259198..2260187) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460718 YP_001421764.1 CDS ansR NC_009725.1 2260364 2260717 D HTH-type transcriptional regulator AnsR (Ans operon repressor); AnsR 2260364..2260717 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460719 YP_001421765.1 CDS yqxK NC_009725.1 2260728 2261891 R conserved hypothetical protein YqxK; hypothetical protein complement(2260728..2261891) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460720 YP_001421766.1 CDS nudF NC_009725.1 2261891 2262448 R ADP-ribose pyrophosphatase NudF; NudF complement(2261891..2262448) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460721 YP_001421767.1 CDS yqkF NC_009725.1 2262709 2263629 D conserved hypothetical protein YqkF; hypothetical protein 2262709..2263629 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460722 YP_001421768.1 CDS yqkE NC_009725.1 2263662 2263889 R hypothetical protein YqkE; hypothetical protein complement(2263662..2263889) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460723 YP_001421769.1 CDS yqkD NC_009725.1 2263990 2264922 D hypothetical protein YqkD; hypothetical protein 2263990..2264922 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459876 YP_001421770.1 CDS yqkC NC_009725.1 2264962 2265201 R hypothetical protein YqkC; hypothetical protein complement(2264962..2265201) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459877 YP_001421771.1 CDS yqkB NC_009725.1 2265176 2265538 R conserved hypothetical protein YqkB; hypothetical protein complement(2265176..2265538) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459878 YP_001421772.1 CDS yqkA NC_009725.1 2265629 2266579 R conserved hypothetical protein YqkA; hypothetical protein complement(2265629..2266579) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459879 YP_001421773.1 CDS yqjZ NC_009725.1 2266576 2266920 R hypothetical protein YqjZ; hypothetical protein complement(2266576..2266920) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459880 YP_001421774.1 CDS yqjY NC_009725.1 2266933 2267403 R conserved hypothetical protein YqjY; hypothetical protein complement(2266933..2267403) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459881 YP_001421775.1 CDS yqjW NC_009725.1 2267619 2268845 D involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV 2267619..2268845 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459607 YP_001421776.1 CDS yqjX NC_009725.1 2268861 2269205 D hypothetical protein YqjX; hypothetical protein 2268861..2269205 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459608 YP_001421777.1 CDS yqzH NC_009725.1 2269303 2269512 D hypothetical protein YqzH; hypothetical protein 2269303..2269512 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459609 YP_001421778.1 CDS RBAM_021860 NC_009725.1 2269585 2270667 D hypothetical protein 2269585..2270667 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459610 YP_001421779.1 CDS RBAM_021870 NC_009725.1 2270748 2270915 D hypothetical protein 2270748..2270915 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459611 YP_001421780.1 CDS yqjT NC_009725.1 2270917 2271309 R conserved hypothetical protein YqjT; hypothetical protein complement(2270917..2271309) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459612 YP_001421781.1 CDS coaA NC_009725.1 2271331 2272290 R catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis; pantothenate kinase complement(2271331..2272290) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460191 YP_001421782.1 CDS dsdA NC_009725.1 2272366 2273715 R catalyzes the formation of pyruvate from serine; D-serine dehydratase complement(2272366..2273715) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460192 YP_001421783.1 CDS yqjQ NC_009725.1 2273732 2274508 R oxidoreductase YqjQ; hypothetical protein complement(2273732..2274508) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460193 YP_001421784.1 CDS yqjP NC_009725.1 2274514 2275470 R conserved hypothetical protein YqjP; hypothetical protein complement(2274514..2275470) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460194 YP_001421785.1 CDS proI NC_009725.1 2275867 2276706 D pyrroline-5-carboxylate reductase II ProI; ProI 2275867..2276706 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460195 YP_001421786.1 CDS dfnM NC_009725.1 2276743 2277489 R difficidin synthesis; involved in polyketide production; polyketide biosynthesis enoyl-CoA hydratase complement(2276743..2277489) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460196 YP_001421787.1 CDS dfnL NC_009725.1 2277549 2278796 R difficidin synthesis; hydroxymethylglutaryl-coenzyme A synthase; DfnL complement(2277549..2278796) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459539 YP_001421788.1 CDS dfnK NC_009725.1 2278854 2280008 R difficidin synthesis; cytochrome P450 'oxidase'; DfnK complement(2278854..2280008) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459540 YP_001421789.1 CDS dfnJ NC_009725.1 2280090 2286305 R difficidin synthesis; modular polyketide synthase of type I; DfnJ complement(2280090..2286305) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459541 YP_001421790.1 CDS dfnI NC_009725.1 2286302 2292454 R difficidin synthesis; modular polyketide synthase of type I; DfnI complement(2286302..2292454) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459542 YP_001421791.1 CDS dfnH NC_009725.1 2292477 2300195 R difficidin synthesis; modular polyketide synthase of type I; DfnH complement(2292477..2300195) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459543 YP_001421792.1 CDS dfnG NC_009725.1 2300200 2315814 R difficidin synthesis; modular polyketide synthase of type I; DfnG complement(2300200..2315814) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459544 YP_001421793.1 CDS dfnF NC_009725.1 2315866 2321592 R difficidin synthesis; modular polyketide synthase of type I; DfnF complement(2315866..2321592) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459714 YP_001421794.1 CDS dfnE NC_009725.1 2321632 2327928 R difficidin synthesis; modular polyketide synthase of type I; DfnE complement(2321632..2327928) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459715 YP_001421795.1 CDS dfnD NC_009725.1 2327947 2340537 R difficidin synthesis; modular polyketide synthase of type I; DfnD complement(2327947..2340537) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459716 YP_001421796.1 CDS dfnC NC_009725.1 2340577 2341314 R difficidin synthesis; beta-ketoacyl-acyl carrier protein reductase; DfnC complement(2340577..2341314) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459717 YP_001421797.1 CDS dfnB NC_009725.1 2341329 2342660 R difficidin synthesis; acyl-CoA synthetase; DfnB complement(2341329..2342660) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459718 YP_001421798.1 CDS dfnX NC_009725.1 2342690 2342962 R hypothetical protein probably involved in difficidin synthesis; DfnX complement(2342690..2342962) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459719 YP_001421799.1 CDS dfnY NC_009725.1 2342987 2343967 R difficidin synthesis; DfnY complement(2342987..2343967) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459989 YP_001421800.1 CDS dfnA NC_009725.1 2344008 2346266 R difficidin synthesis; acyltransferase/oxidoreductase; DfnA complement(2344008..2346266) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459990 YP_001421801.1 CDS RBAM_022090 NC_009725.1 2347000 2347530 D transcription antiterminator 2347000..2347530 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459991 YP_001421802.1 CDS RBAM_022100 NC_009725.1 2347874 2348752 R LysR family transcriptional regulator complement(2347874..2348752) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459992 YP_001421803.1 CDS RBAM_022110 NC_009725.1 2348891 2349214 D hypothetical protein 2348891..2349214 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459993 YP_001421804.1 CDS yqjM NC_009725.1 2349353 2350369 D catalyzes the reduction of alpha, beta-unsaturated aldehydes and ketones; reduces the nitro group nitroester and nitroaromatic compounds; NADPH dehydrogenase NamA 2349353..2350369 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459994 YP_001421805.1 CDS yqjL NC_009725.1 2350483 2351256 D hypothetical protein YqjL; hypothetical protein 2350483..2351256 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463013 YP_001421806.1 CDS rpmG NC_009725.1 2351306 2351455 R in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 complement(2351306..2351455) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463014 YP_001421807.1 CDS rnz NC_009725.1 2351534 2352460 R member of metallo-beta-lactamase family; the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase; in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not; associates with two zinc ions; ribonuclease Z complement(2351534..2352460) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463015 YP_001421808.1 CDS zwf NC_009725.1 2352669 2354138 D catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 2352669..2354138 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463016 YP_001421809.1 CDS yqjI NC_009725.1 2354228 2355637 R catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; 6-phosphogluconate dehydrogenase complement(2354228..2355637) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463017 YP_001421810.1 CDS yqjH NC_009725.1 2355746 2356990 R involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV complement(2355746..2356990) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463018 YP_001421811.1 CDS yqzJ NC_009725.1 2357066 2357347 D hypothetical protein YqzJ; hypothetical protein 2357066..2357347 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459952 YP_001421812.1 CDS yqjG NC_009725.1 2357380 2358216 D involved in biogenesis of membrane proteins; Firmicutes specific proteins are shorter than other bacterial counterparts and have a signal peptide and lipid attachment site; OxaA-like protein precursor 2357380..2358216 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459953 YP_001421813.1 CDS yqjE NC_009725.1 2358330 2359445 R conserved hypothetical protein YqjE; hypothetical protein complement(2358330..2359445) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459954 YP_001421814.1 CDS yqjD NC_009725.1 2359462 2360985 R propionyl-CoA carboxylase beta chain (PCCase) YqjD; hypothetical protein complement(2359462..2360985) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459955 YP_001421815.1 CDS yqjC NC_009725.1 2360972 2361400 R conserved hypothetical protein YqjC; hypothetical protein complement(2360972..2361400) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459956 YP_001421816.1 CDS yqjB NC_009725.1 2361603 2362133 R conserved hypothetical protein YqjB; hypothetical protein complement(2361603..2362133) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459957 YP_001421817.1 CDS yqjA NC_009725.1 2362203 2363156 R conserved hypothetical protein YqjA; hypothetical protein complement(2362203..2363156) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462330 YP_001421818.1 CDS yqiZ NC_009725.1 2363233 2363955 R amino acid ABC transporter (ATP-binding protein) YqiZ; hypothetical protein complement(2363233..2363955) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462331 YP_001421819.1 CDS yqiY NC_009725.1 2363948 2364607 R amino acid ABC transporter (permease) YqiY; hypothetical protein complement(2363948..2364607) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462332 YP_001421820.1 CDS yqiX NC_009725.1 2364669 2365436 R amino acid ABC transporter (binding protein) YqiX; hypothetical protein complement(2364669..2365436) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462333 YP_001421821.1 CDS yqiW NC_009725.1 2365682 2366113 R conserved hypothetical protein YqiW; hypothetical protein complement(2365682..2366113) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462334 YP_001421822.1 CDS bmrU NC_009725.1 2366298 2367194 D multidrug resistance protein BmrU; hypothetical protein 2366298..2367194 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462335 YP_001421823.1 CDS bkdB NC_009725.1 2367239 2368501 R branched-chain alpha-keto acid dehydrogenase E2 subunit (lipoamide acyltransferase) BkdB; branched-chain alpha-keto acid dehydrogenase subunit E2 complement(2367239..2368501) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461504 YP_001421824.1 CDS bkdAB NC_009725.1 2368523 2369506 R branched-chain alpha-keto acid dehydrogenase E1 subunit (2-oxoisovalerate dehydrogenase beta) BkdAB; BkdAB complement(2368523..2369506) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461505 YP_001421825.1 CDS bkdAA NC_009725.1 2369519 2370511 R branched-chain alpha-keto acid dehydrogenase E1 subunit (2-oxoisovalerate dehydrogenase alpha) bBkdAA; BkdAA complement(2369519..2370511) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461506 YP_001421826.1 CDS lpdV NC_009725.1 2370534 2371955 R E3 component of the branched-chain alpha-keto acid dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase complement(2370534..2371955) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461507 YP_001421827.1 CDS buk NC_009725.1 2371945 2373054 R catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate; butyrate kinase complement(2371945..2373054) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461508 YP_001421828.1 CDS bcd NC_009725.1 2373078 2374172 R leucine dehydrogenase Bcd; glutamate dehydrogenase/leucine dehydrogenase family protein complement(2373078..2374172) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461509 YP_001421829.1 CDS ptb NC_009725.1 2374186 2375079 R catalyzes the synthesis of butanoylphosphate from butanoyl-CoA and inorganic phosphate; phosphate butyryltransferase complement(2374186..2375079) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459588 YP_001421830.1 CDS bkdR NC_009725.1 2375202 2377271 R sigma-L-dependent transcriptional regulator BkdR; BkdR complement(2375202..2377271) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459589 YP_001421831.1 CDS yqzF NC_009725.1 2377425 2377667 D hypothetical protein YqzF; hypothetical protein 2377425..2377667 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459590 YP_001421832.1 CDS yqiQ NC_009725.1 2377696 2378601 R carboxyvinyl-carboxyphosphonate phosphorylmutase YqiQ; hypothetical protein complement(2377696..2378601) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459591 YP_001421833.1 CDS prpD NC_009725.1 2378620 2380047 R functions in propionate metabolism; involved in isomerization of (2S,3S)-methylcitrate to (2R,3S)-methylisocitrate; also encodes minor aconitase or dehydratase activity; aconitase C; 2-methylcitrate dehydratase complement(2378620..2380047) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459592 YP_001421834.1 CDS mmgD NC_009725.1 2380073 2381170 R forms citrate from oxaloacetate and acetyl-CoA; functions in TCA cycle, glyoxylate cycle and respiration; citrate synthase 3 complement(2380073..2381170) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459593 YP_001421835.1 CDS mmgC NC_009725.1 2381194 2382327 R acyl-CoA dehydrogenase MmgC; MmgC complement(2381194..2382327) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462713 YP_001421836.1 CDS mmgB NC_009725.1 2382357 2383208 R 3-hydroxybutyryl-CoA dehydrogenase MmgB; MmgB complement(2382357..2383208) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462714 YP_001421837.1 CDS mmgA NC_009725.1 2383228 2384409 R Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase complement(2383228..2384409) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462715 YP_001421838.1 CDS yqiK NC_009725.1 2384549 2385286 R glycerophosphodiester phosphodiesterase YqiK; hypothetical protein complement(2384549..2385286) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462716 YP_001421839.1 CDS yqiI NC_009725.1 2385374 2386000 R N-acetylmuramoyl-L-alanine amidase YqiI; hypothetical protein complement(2385374..2386000) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462717 YP_001421840.1 CDS yqiH NC_009725.1 2386019 2386312 R hypothetical protein YqiH; hypothetical protein complement(2386019..2386312) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462718 YP_001421841.1 CDS RBAM_022490 NC_009725.1 2386645 2387268 R hypothetical protein complement(2386645..2387268) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461659 YP_001421842.1 CDS RBAM_022500 NC_009725.1 2387415 2388047 D hypothetical protein 2387415..2388047 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461660 YP_001421843.1 CDS RBAM_022510 NC_009725.1 2388131 2388481 D hypothetical protein 2388131..2388481 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461661 YP_001421844.1 CDS yqiG NC_009725.1 2388572 2389693 D NADH-dependent flavin oxidoreductase YqiG; hypothetical protein 2388572..2389693 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461662 YP_001421845.1 CDS RBAM_022530 NC_009725.1 2390159 2390371 D hypothetical protein 2390159..2390371 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461663 YP_001421846.1 CDS yncD NC_009725.1 2390548 2391729 D alanine racemase YncD; hypothetical protein 2390548..2391729 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461664 YP_001421847.1 CDS spo0A NC_009725.1 2391878 2392678 R master regulator of initiation of sporulation; cd00156; involved in initiation of biofilm formation; Spo0A complement(2391878..2392678) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462336 YP_001421848.1 CDS spoIVB NC_009725.1 2392959 2394239 R stage IV sporulation protein SpoIVB; SpoIVB complement(2392959..2394239) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462337 YP_001421849.1 CDS recN NC_009725.1 2394403 2396133 R DNA repair protein RecN; hypothetical protein complement(2394403..2396133) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462338 YP_001421850.1 CDS ahrC NC_009725.1 2396165 2396614 R regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes; arginine repressor complement(2396165..2396614) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462339 YP_001421851.1 CDS yqxC NC_009725.1 2396711 2397556 R conserved hypothetical protein YqxC; hypothetical protein complement(2396711..2397556) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462340 YP_001421852.1 CDS dxs NC_009725.1 2397553 2399454 R catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase complement(2397553..2399454) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462341 YP_001421853.1 CDS yqiD NC_009725.1 2399598 2400488 R geranyltranstransferase YqiD; hypothetical protein complement(2399598..2400488) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459557 YP_001421854.1 CDS xseB NC_009725.1 2400478 2400732 R catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit complement(2400478..2400732) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459558 YP_001421855.1 CDS xseA NC_009725.1 2400732 2402093 R bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit complement(2400732..2402093) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459559 YP_001421856.1 CDS folD NC_009725.1 2402199 2403050 R catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase complement(2402199..2403050) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459560 YP_001421857.1 CDS nusB NC_009725.1 2403062 2403454 R Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB complement(2403062..2403454) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459561 YP_001421858.1 CDS yqhY NC_009725.1 2403719 2404126 R conserved hypothetical protein YqhY; hypothetical protein complement(2403719..2404126) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459562 YP_001421859.1 CDS accC NC_009725.1 2404148 2405500 R an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit complement(2404148..2405500) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460614 YP_001421860.1 CDS accB NC_009725.1 2405515 2405994 R composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit complement(2405515..2405994) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460615 YP_001421861.1 CDS spoIIIAH NC_009725.1 2406148 2406798 R stage III sporulation protein AH (SpoIIIAH); SpoIIIAH complement(2406148..2406798) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460616 YP_001421862.1 CDS spoIIIAG NC_009725.1 2406802 2407494 R stage III sporulation protein AG (SpoIIIAG); SpoIIIAG complement(2406802..2407494) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460617 YP_001421863.1 CDS spoIIIAF NC_009725.1 2407487 2408107 R stage III sporulation protein AF (SpoIIIAF); SpoIIIAF complement(2407487..2408107) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460618 YP_001421864.1 CDS spoIIIAE NC_009725.1 2408124 2409332 R stage III sporulation protein AE (SpoIIIAE); SpoIIIAE complement(2408124..2409332) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460619 YP_001421865.1 CDS spoIIIAD NC_009725.1 2409365 2409667 R stage III sporulation protein AD (SpoIIIAD); SpoIIIAD complement(2409365..2409667) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460132 YP_001421866.1 CDS spoIIIAC NC_009725.1 2409767 2409973 R stage III sporulation protein AC (SpoIIIAC); SpoIIIAC complement(2409767..2409973) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460133 YP_001421867.1 CDS spoIIIAB NC_009725.1 2409996 2410511 R necessary for complete engulfment of forespore; stage III sporulation protein SpoAB complement(2409996..2410511) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460134 YP_001421868.1 CDS spoIIIAA NC_009725.1 2410505 2411428 R stage III sporulation protein SpoIIIAA; hypothetical protein complement(2410505..2411428) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460135 YP_001421869.1 CDS yqhV NC_009725.1 2411506 2411787 R hypothetical protein YqhV; hypothetical protein complement(2411506..2411787) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460136 YP_001421870.1 CDS efp NC_009725.1 2411933 2412490 R Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P complement(2411933..2412490) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460137 YP_001421871.1 CDS yqhT NC_009725.1 2412515 2413576 R dipeptidase YqhT; hypothetical protein complement(2412515..2413576) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463001 YP_001421872.1 CDS yqhR NC_009725.1 2413708 2414238 R hypothetical protein YqhR; hypothetical protein complement(2413708..2414238) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463002 YP_001421873.1 CDS yqhQ NC_009725.1 2414460 2415416 D conserved hypothetical protein YqhQ; hypothetical protein 2414460..2415416 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463003 YP_001421874.1 CDS yqhP NC_009725.1 2415451 2415846 D hypothetical protein YqhP; hypothetical protein 2415451..2415846 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463004 YP_001421875.1 CDS yqhO NC_009725.1 2415843 2416718 R conserved hypothetical protein YqhO; hypothetical protein complement(2415843..2416718) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463005 YP_001421876.1 CDS mntR NC_009725.1 2416833 2417261 R involved in manganese homeostasis; activates the transcription of the mntABCD operon; manganese transport transcriptional regulator complement(2416833..2417261) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463006 YP_001421877.1 CDS yqhM NC_009725.1 2417361 2418197 R conserved hypothetical protein YqhM; hypothetical protein complement(2417361..2418197) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461358 YP_001421878.1 CDS yqhL NC_009725.1 2418390 2418770 D conserved hypothetical protein YqhL; hypothetical protein 2418390..2418770 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461359 YP_001421879.1 CDS gcvPB NC_009725.1 2418822 2420297 R acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein; glycine dehydrogenase subunit 2 complement(2418822..2420297) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461360 YP_001421880.1 CDS gcvPA NC_009725.1 2420290 2421636 R acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 2 to form the P protein; glycine dehydrogenase subunit 1 complement(2420290..2421636) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461361 YP_001421881.1 CDS gcvT NC_009725.1 2421651 2422751 R catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T complement(2421651..2422751) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461362 YP_001421882.1 CDS yqhH NC_009725.1 2423175 2424845 D SNF2 helicase YqhH; hypothetical protein 2423175..2424845 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461363 YP_001421883.1 CDS yqhG NC_009725.1 2424867 2425661 D hypothetical protein YqhG; hypothetical protein 2424867..2425661 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461802 YP_001421884.1 CDS sinI NC_009725.1 2425838 2426011 D antagonist of SinR; transcription control of biofilm formation; SinI 2425838..2426011 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461803 YP_001421885.1 CDS sinR NC_009725.1 2426039 2426380 D HTH-type transcriptional regulator; master regulator of biofilm formation; SinR 2426039..2426380 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461804 YP_001421886.1 CDS tasA NC_009725.1 2426428 2427213 R spore coat associated protein N; major protein component of extracellular matrix, required for development of complex colony architecture; TasA complement(2426428..2427213) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461805 YP_001421887.1 CDS sipW NC_009725.1 2427278 2427862 R type I signal peptidase; involved in processing of TasA; SipW complement(2427278..2427862) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461806 YP_001421888.1 CDS yqxM NC_009725.1 2427834 2428505 R member of the yqxM-sipW-tasA operon, essential for biofilm formation and controled by sinR; hypothetical protein complement(2427834..2428505) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461807 YP_001421889.1 CDS yqzG NC_009725.1 2428764 2429093 D hypothetical protein YqzG; hypothetical protein 2428764..2429093 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460471 YP_001421890.1 CDS yqzE NC_009725.1 2429133 2429312 R hypothetical protein YqzE; hypothetical protein complement(2429133..2429312) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460472 YP_001421891.1 CDS comGG NC_009725.1 2429369 2429746 R DNA transport machinery protein ComGG; ComGG complement(2429369..2429746) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460473 YP_001421892.1 CDS comGF NC_009725.1 2429747 2430247 R probably part of the DNA transport machinery ComGF; ComGF complement(2429747..2430247) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460474 YP_001421893.1 CDS comGE NC_009725.1 2430156 2430470 R DNA transport machinery protein ComGE; ComGE complement(2430156..2430470) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460475 YP_001421894.1 CDS comGD NC_009725.1 2430454 2430891 R DNA transport machinery protein ComGD; ComGD complement(2430454..2430891) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460476 YP_001421895.1 CDS comGC NC_009725.1 2430881 2431189 R exogenous DNA-binding (competence) ComGC; ComGC complement(2430881..2431189) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460693 YP_001421896.1 CDS comGB NC_009725.1 2431194 2432231 R DNA transport machinery protein ComGB; ComGB complement(2431194..2432231) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460694 YP_001421897.1 CDS comGA NC_009725.1 2432218 2433288 R protein required for exogenous DNA-binding (competence) ComGA; ComGA complement(2432218..2433288) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460695 YP_001421898.1 CDS yqxL NC_009725.1 2433485 2434435 R conserved hypothetical protein YqxL; hypothetical protein complement(2433485..2434435) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460696 YP_001421899.1 CDS yqhB NC_009725.1 2434581 2435882 D conserved hypothetical protein YqhB; hypothetical protein 2434581..2435882 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460697 YP_001421900.1 CDS yqhA NC_009725.1 2435920 2436750 R conserved hypothetical protein YqhA; hypothetical protein complement(2435920..2436750) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460698 YP_001421901.1 CDS yqgZ NC_009725.1 2436957 2437337 R conserved hypothetical protein YqgZ; hypothetical protein complement(2436957..2437337) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462864 YP_001421902.1 CDS yqgY NC_009725.1 2437574 2437819 D hypothetical protein YqgY; hypothetical protein 2437574..2437819 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462865 YP_001421903.1 CDS yqgX NC_009725.1 2437859 2438497 R conserved hypothetical protein YqgX; hypothetical protein complement(2437859..2438497) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462866 YP_001421904.1 CDS yqgW NC_009725.1 2438652 2438825 D hypothetical protein YqgW; hypothetical protein 2438652..2438825 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462867 YP_001421905.1 CDS yqgV NC_009725.1 2438858 2439172 R conserved hypothetical protein YqgV; hypothetical protein complement(2438858..2439172) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462452 YP_001421906.1 CDS yqgU NC_009725.1 2439178 2440230 R hypothetical protein YqgU; hypothetical protein complement(2439178..2440230) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462453 YP_001421907.1 CDS yqgT NC_009725.1 2440288 2441415 R conserved hypothetical protein YqgT; hypothetical protein complement(2440288..2441415) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462454 YP_001421908.1 CDS glcK NC_009725.1 2441498 2442460 R glucose kinase GlcK; GlcK complement(2441498..2442460) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462455 YP_001421909.1 CDS yqgQ NC_009725.1 2442495 2442692 R conserved hypothetical protein YqgQ; hypothetical protein complement(2442495..2442692) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462456 YP_001421910.1 CDS nhaC NC_009725.1 2442902 2444266 D Na+/H+ antiporter NhaC; hypothetical protein 2442902..2444266 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462457 YP_001421911.1 CDS yqgO NC_009725.1 2444342 2444515 R hypothetical protein YqgO; hypothetical protein complement(2444342..2444515) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462398 YP_001421912.1 CDS yqgN NC_009725.1 2444586 2445140 R conserved hypothetical protein YqgN; hypothetical protein complement(2444586..2445140) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462399 YP_001421913.1 CDS rpmG NC_009725.1 2445219 2445368 R in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 complement(2445219..2445368) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462400 YP_001421914.1 CDS yqzD NC_009725.1 2445715 2446068 D hypothetical protein YqzD; hypothetical protein 2445715..2446068 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462401 YP_001421915.1 CDS yqzC NC_009725.1 2446065 2446529 D hypothetical protein YqzC; hypothetical protein 2446065..2446529 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462402 YP_001421916.1 CDS pstBB NC_009725.1 2446628 2447410 R ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate ABC transporter ATP-binding protein complement(2446628..2447410) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462403 YP_001421917.1 CDS pstBA NC_009725.1 2447422 2448228 R ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate ABC transporter ATP-binding protein complement(2447422..2448228) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459786 YP_001421918.1 CDS pstA NC_009725.1 2448247 2449131 R phosphate ABC transporter (permease) PstA; hypothetical protein complement(2448247..2449131) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459787 YP_001421919.1 CDS yqgH NC_009725.1 2449131 2450060 R phosphate ABC transporter (permease) YqgH; hypothetical protein complement(2449131..2450060) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459788 YP_001421920.1 CDS pstS NC_009725.1 2450109 2451011 R phosphate ABC transporter (binding protein) PstS; hypothetical protein complement(2450109..2451011) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459789 YP_001421921.1 CDS RBAM_023300 NC_009725.1 2451243 2451575 D hypothetical protein 2451243..2451575 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459790 YP_001421922.1 CDS RBAM_023310 NC_009725.1 2451581 2452393 D transposase 2451581..2452393 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459791 YP_001421923.1 CDS pbpA NC_009725.1 2452456 2454603 R penicillin-binding protein IIA (PbpA); PbpA complement(2452456..2454603) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459792 YP_001421924.1 CDS yqgE NC_009725.1 2454705 2455994 R hypothetical protein YqgE; hypothetical protein complement(2454705..2455994) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459793 YP_001421925.1 CDS sodA NC_009725.1 2456114 2456719 R superoxide dismutase [Mn] SodA; downregulation by plant root exudate; hypothetical protein complement(2456114..2456719) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459794 YP_001421926.1 CDS yqgC NC_009725.1 2456885 2457367 R conserved hypothetical protein YqgC; hypothetical protein complement(2456885..2457367) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459795 YP_001421927.1 CDS yqgB NC_009725.1 2457529 2458290 D conserved hypothetical protein YqgB; hypothetical protein 2457529..2458290 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459796 YP_001421928.1 CDS yqfZ NC_009725.1 2458382 2458684 D conserved hypothetical protein YqfZ; hypothetical protein 2458382..2458684 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459797 YP_001421929.1 CDS ispG NC_009725.1 2458808 2459935 D catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 2458808..2459935 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460151 YP_001421930.1 CDS yqfX NC_009725.1 2459969 2460340 R hypothetical protein YqfX; hypothetical protein complement(2459969..2460340) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460152 YP_001421931.1 CDS yqfW NC_009725.1 2460480 2461061 D conserved hypothetical protein YqfW; hypothetical protein 2460480..2461061 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460153 YP_001421932.1 CDS zur NC_009725.1 2461092 2461502 R zinc-specific metallo-regulatory protein Zur; Zur complement(2461092..2461502) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460154 YP_001421933.1 CDS yqfU NC_009725.1 2461626 2462507 R conserved hypothetical protein YqfU; hypothetical protein complement(2461626..2462507) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460155 YP_001421934.1 CDS yqfT NC_009725.1 2462626 2462880 D hypothetical protein YqfT; hypothetical protein 2462626..2462880 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460156 YP_001421935.1 CDS yqfS NC_009725.1 2462913 2463806 R Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues; endonuclease IV complement(2462913..2463806) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461457 YP_001421936.1 CDS yqfR NC_009725.1 2463818 2465134 R ATP-dependent RNA helicase YqfR; hypothetical protein complement(2463818..2465134) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461458 YP_001421937.1 CDS yqfQ NC_009725.1 2465300 2465995 D hypothetical protein YqfQ; hypothetical protein 2465300..2465995 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461459 YP_001421938.1 CDS ispH NC_009725.1 2466118 2467062 D catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2466118..2467062 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461460 YP_001421939.1 CDS yqfO NC_009725.1 2467083 2468204 R conserved hypothetical protein YqfO; hypothetical protein complement(2467083..2468204) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461461 YP_001421940.1 CDS yqfN NC_009725.1 2468197 2468901 R conserved hypothetical protein YqfN; hypothetical protein complement(2468197..2468901) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461462 YP_001421941.1 CDS cccA NC_009725.1 2469027 2469389 R cytochrome c550 CccA; CccA complement(2469027..2469389) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460975 YP_001421942.1 CDS rpoD NC_009725.1 2469740 2470861 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; primary sigma factor of bacterium; RNA polymerase sigma factor RpoD complement(2469740..2470861) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460976 YP_001421943.1 CDS dnaG NC_009725.1 2471054 2472865 R synthesizes RNA primers at the replication forks; DNA primase complement(2471054..2472865) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460977 YP_001421944.1 CDS yqxD NC_009725.1 2472887 2473393 R conserved hypothetical protein YqxD; hypothetical protein complement(2472887..2473393) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460978 YP_001421945.1 CDS yqfL NC_009725.1 2473649 2474461 R conserved hypothetical protein YqfL; hypothetical protein complement(2473649..2474461) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460979 YP_001421946.1 CDS yqzB NC_009725.1 2474487 2475128 R conserved hypothetical protein YqzB; hypothetical protein complement(2474487..2475128) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460980 YP_001421947.1 CDS glyS NC_009725.1 2475226 2477265 R glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta complement(2475226..2477265) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461364 YP_001421948.1 CDS glyQ NC_009725.1 2477258 2478145 R glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha complement(2477258..2478145) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461365 YP_001421949.1 CDS recO NC_009725.1 2478447 2479214 R involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO complement(2478447..2479214) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461366 YP_001421950.1 CDS era NC_009725.1 2479549 2480454 R Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era complement(2479549..2480454) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461367 YP_001421951.1 CDS cdd NC_009725.1 2480435 2480845 R cytidine deaminase Cdd; hypothetical protein complement(2480435..2480845) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461368 YP_001421952.1 CDS dgkA NC_009725.1 2480969 2481349 R diacylglycerol kinase DgkA; hypothetical protein complement(2480969..2481349) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461369 YP_001421953.1 CDS yqfG NC_009725.1 2481324 2481797 R conserved hypothetical protein YqfG; metalloprotease complement(2481324..2481797) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459726 YP_001421954.1 CDS yqfF NC_009725.1 2481798 2483930 R conserved hypothetical protein YqfF; hypothetical protein complement(2481798..2483930) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459727 YP_001421955.1 CDS phoH NC_009725.1 2484011 2484970 R phosphate starvation-induced protein PhoH; hypothetical protein complement(2484011..2484970) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459728 YP_001421956.1 CDS yqfD NC_009725.1 2484974 2486158 R conserved hypothetical protein YqfD; hypothetical protein complement(2484974..2486158) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459729 YP_001421957.1 CDS yqfC NC_009725.1 2486176 2486457 R conserved hypothetical protein YqfC; hypothetical protein complement(2486176..2486457) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459730 YP_001421958.1 CDS yqfB NC_009725.1 2486514 2486948 R hypothetical protein YqfB; hypothetical protein complement(2486514..2486948) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459731 YP_001421959.1 CDS yqfA NC_009725.1 2486976 2487968 R conserved hypothetical protein YqfA; hypothetical protein complement(2486976..2487968) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462034 YP_001421960.1 CDS yqeZ NC_009725.1 2487993 2489309 R conserved hypothetical protein YqeZ; hypothetical protein complement(2487993..2489309) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462035 YP_001421961.1 CDS yqeY NC_009725.1 2489432 2489878 R conserved hypothetical protein YqeY; hypothetical protein complement(2489432..2489878) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462036 YP_001421962.1 CDS rpsU NC_009725.1 2489893 2490066 R a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 complement(2489893..2490066) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462037 YP_001421963.1 CDS yqeW NC_009725.1 2490229 2491164 D conserved hypothetical protein YqeW; hypothetical protein 2490229..2491164 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462038 YP_001421964.1 CDS yqeV NC_009725.1 2491201 2492556 R conserved hypothetical protein YqeV; hypothetical protein complement(2491201..2492556) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462039 YP_001421965.1 CDS yqeU NC_009725.1 2492556 2493326 R in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE complement(2492556..2493326) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460808 YP_001421966.1 CDS prmA NC_009725.1 2493349 2494284 R methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; ribosomal protein L11 methyltransferase complement(2493349..2494284) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460809 YP_001421967.1 CDS dnaJ NC_009725.1 2494308 2495435 R chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; molecular chaperone DnaJ complement(2494308..2495435) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460810 YP_001421968.1 CDS dnaK NC_009725.1 2495621 2497459 R heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK complement(2495621..2497459) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460811 YP_001421969.1 CDS grpE NC_009725.1 2497484 2498059 R with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE complement(2497484..2498059) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460812 YP_001421970.1 CDS hrcA NC_009725.1 2498119 2499150 R Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor complement(2498119..2499150) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460813 YP_001421971.1 CDS hemN NC_009725.1 2499231 2500370 R catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase complement(2499231..2500370) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462825 YP_001421972.1 CDS lepA NC_009725.1 2500430 2502265 R binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA complement(2500430..2502265) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462826 YP_001421973.1 CDS yqxA NC_009725.1 2502398 2502736 R hypothetical protein YqxA; hypothetical protein complement(2502398..2502736) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462827 YP_001421974.1 CDS spoIIP NC_009725.1 2502753 2503946 R stage II sporulation P (SpoIIP); hypothetical protein complement(2502753..2503946) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462828 YP_001421975.1 CDS gpr NC_009725.1 2504014 2505120 R Initiates the rapid degradation of small, acid-soluble proteins during spore germination; germination protease complement(2504014..2505120) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462829 YP_001421976.1 CDS rpsT NC_009725.1 2505323 2505589 D binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 2505323..2505589 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462830 YP_001421977.1 CDS holA NC_009725.1 2505625 2506647 R required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta complement(2505625..2506647) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460672 YP_001421978.1 CDS comEC NC_009725.1 2507032 2509383 R integral membrane protein ComEC; hypothetical protein complement(2507032..2509383) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460673 YP_001421979.1 CDS comEB NC_009725.1 2509384 2509953 R protein required for DNA binding and uptake (competence) ComEB; hypothetical protein complement(2509384..2509953) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460674 YP_001421980.1 CDS comEA NC_009725.1 2510020 2510634 R unspecific high-affinity DNA-binding protein ComEA; hypothetical protein complement(2510020..2510634) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460675 YP_001421981.1 CDS comER NC_009725.1 2510693 2511514 D may be involved in regulation of competence genes; late competence protein ComER 2510693..2511514 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460676 YP_001421982.1 CDS yqeM NC_009725.1 2511583 2512320 R hypothetical protein YqeM; hypothetical protein complement(2511583..2512320) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460677 YP_001421983.1 CDS yqeL NC_009725.1 2512317 2512673 R conserved hypothetical protein YqeL; hypothetical protein complement(2512317..2512673) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460532 YP_001421984.1 CDS yqeK NC_009725.1 2512690 2513250 R HD phosphatase; predicted role in NAD metabolism; hypothetical protein complement(2512690..2513250) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460533 YP_001421985.1 CDS nadD NC_009725.1 2513240 2513809 R transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria; nicotinic acid mononucleotide adenylyltransferase complement(2513240..2513809) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460534 YP_001421986.1 CDS yqeI NC_009725.1 2513820 2514110 R conserved hypothetical protein YqeI; hypothetical protein complement(2513820..2514110) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460535 YP_001421987.1 CDS aroE NC_009725.1 2514104 2514946 R AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase complement(2514104..2514946) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460536 YP_001421988.1 CDS yqeH NC_009725.1 2514966 2516066 R in Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis; GTP-binding protein YqeH complement(2514966..2516066) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460537 YP_001421989.1 CDS yqeG NC_009725.1 2516069 2516587 R conserved hypothetical protein YqeG; hypothetical protein complement(2516069..2516587) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462508 YP_001421990.1 CDS sda NC_009725.1 2516945 2517085 D sporulation inhibitor Sda; Sda 2516945..2517085 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462509 YP_001421991.1 CDS yqeF NC_009725.1 2517428 2518159 R conserved hypothetical protein Yqe; hypothetical protein complement(2517428..2518159) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462510 YP_001421992.1 CDS RBAM_024010 NC_009725.1 2518229 2518963 R polysaccharide deacetylase complement(2518229..2518963) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462511 YP_001421993.1 CDS yqeD NC_009725.1 2519197 2519823 D conserved hypothetical protein YqeD; hypothetical protein 2519197..2519823 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462512 YP_001421994.1 CDS RBAM_024030 NC_009725.1 2520136 2521392 R hypothetical protein complement(2520136..2521392) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462513 YP_001421995.1 CDS spoIIIC NC_009725.1 2521850 2522572 D sigma-28; sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed in the mother cell after engulfment; sporulation sigma factor SigK 2521850..2522572 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460324 YP_001421996.1 CDS RBAM_024050 NC_009725.1 2523046 2523888 D hypothetical protein 2523046..2523888 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460325 YP_001421997.1 CDS RBAM_024060 NC_009725.1 2523885 2524412 D hypothetical protein 2523885..2524412 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460326 YP_001421998.1 CDS yrkR NC_009725.1 2524702 2525118 R conserved hypothetical protein YrkR; phosphate-starvation-inducible protein PsiE complement(2524702..2525118) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460327 YP_001421999.1 CDS yrkQ NC_009725.1 2525164 2526462 R two-component sensor histidine kinase; cd00082, HisKA, Histidine kinase A (dimerization/phosphoacceptor) domain; hypothetical protein complement(2525164..2526462) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460328 YP_001422000.1 CDS yrkP NC_009725.1 2526449 2527144 R two-component response regulator; COG0745, OmpR, RR consisting of a CheY-like receiver domain and a winged helix dNA-binding domain; hypothetical protein complement(2526449..2527144) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460329 YP_001422001.1 CDS yrkO NC_009725.1 2527411 2528628 D conserved hypothetical protein YrkO; hypothetical protein 2527411..2528628 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461150 YP_001422002.1 CDS yrkN NC_009725.1 2529102 2529653 D conserved hypothetical protein YrkN; hypothetical protein 2529102..2529653 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461151 YP_001422003.1 CDS yqaC NC_009725.1 2530134 2530667 R conserved hypothetical protein YqaC; hypothetical protein complement(2530134..2530667) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461152 YP_001422004.1 CDS yyaR NC_009725.1 2530832 2531311 R hypothetical protein YyaR; hypothetical protein complement(2530832..2531311) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461153 YP_001422005.1 CDS yrdA NC_009725.1 2531464 2531964 R conserved hypothetical protein YrdA; hypothetical protein complement(2531464..2531964) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461154 YP_001422006.1 CDS RBAM_024150 NC_009725.1 2532182 2532514 R hypothetical protein complement(2532182..2532514) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461155 YP_001422007.1 CDS RBAM_024160 NC_009725.1 2532688 2533491 R hydrolase complement(2532688..2533491) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461540 YP_001422008.1 CDS RBAM_024170 NC_009725.1 2533524 2534336 R hypothetical protein complement(2533524..2534336) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461541 YP_001422009.1 CDS RBAM_024180 NC_009725.1 2534573 2535298 D hypothetical protein 2534573..2535298 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461542 YP_001422010.1 CDS manA NC_009725.1 2535393 2536340 R mannose-6-phosphate isomerase ManA; hypothetical protein complement(2535393..2536340) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461543 YP_001422011.1 CDS manP NC_009725.1 2536355 2538313 R phosphotransferase system (PTS) mannose-specificenzyme IIBCA component ManP; ManP complement(2536355..2538313) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461544 YP_001422012.1 CDS manR NC_009725.1 2538466 2540418 R mannose operon transcriptional antiterminator ManR; ManR complement(2538466..2540418) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461545 YP_001422013.1 CDS RBAM_024220 NC_009725.1 2540648 2541565 R hypothetical protein complement(2540648..2541565) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460357 YP_001422014.1 CDS yjdI NC_009725.1 2541610 2542092 R transcription regulator YjdI; hypothetical protein complement(2541610..2542092) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460358 YP_001422015.1 CDS RBAM_024240 NC_009725.1 2542160 2543044 R HTH-type transcriptional regulator complement(2542160..2543044) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460359 YP_001422016.1 CDS yybF1 NC_009725.1 2543169 2544377 D hypothetical transport protein yYybF1; hypothetical protein 2543169..2544377 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460360 YP_001422017.1 CDS yrhJ NC_009725.1 2544527 2547688 R cytochrome P450/NADPH-cytochrome P450reductase YrhJ; hypothetical protein complement(2544527..2547688) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460361 YP_001422018.1 CDS yrhI NC_009725.1 2547716 2548318 R conserved hypothetical protein YrhI; hypothetical protein complement(2547716..2548318) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460362 YP_001422019.1 CDS yrhH NC_009725.1 2548492 2549031 R hypothetical protein YrhH; hypothetical protein complement(2548492..2549031) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461647 YP_001422020.1 CDS yrzI NC_009725.1 2549532 2549672 R conserved hypothetical protein YrzI; hypothetical protein complement(2549532..2549672) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461648 YP_001422021.1 CDS yrhG NC_009725.1 2550062 2550862 R formate transporter YrhG; hypothetical protein complement(2550062..2550862) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461649 YP_001422022.1 CDS yrhF NC_009725.1 2551129 2551497 R conserved hypothetical protein YrhF; hypothetical protein complement(2551129..2551497) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461650 YP_001422023.1 CDS yrhE NC_009725.1 2551759 2554746 D formate dehydrogenase YrhE; hypothetical protein 2551759..2554746 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461651 YP_001422024.1 CDS yrhD NC_009725.1 2554764 2555255 D conserved hypothetical protein YrhD; hypothetical protein 2554764..2555255 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461652 YP_001422025.1 CDS yrhC NC_009725.1 2555295 2555525 R hypothetical protein YrhC; hypothetical protein complement(2555295..2555525) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462149 YP_001422026.1 CDS yrhB NC_009725.1 2555609 2556751 R catalyzes the formation of L-homocysteine from cystathionine; cystathionine beta-lyase complement(2555609..2556751) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462150 YP_001422027.1 CDS yrhA NC_009725.1 2556753 2557670 R cysteine synthase YrhA; hypothetical protein complement(2556753..2557670) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462151 YP_001422028.1 CDS mtn NC_009725.1 2557724 2558419 R enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase complement(2557724..2558419) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462152 YP_001422029.1 CDS yrrT NC_009725.1 2558440 2559081 R hypothetical protein YrrT; hypothetical protein complement(2558440..2559081) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462153 YP_001422030.1 CDS yrzA NC_009725.1 2559265 2559468 D hypothetical protein YrzA; hypothetical protein 2559265..2559468 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462154 YP_001422031.1 CDS yrrS NC_009725.1 2559508 2560224 R hypothetical protein YrrS; hypothetical protein complement(2559508..2560224) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462355 YP_001422032.1 CDS yrrR NC_009725.1 2560288 2562042 R penicillin-binding protein YrrR; hypothetical protein complement(2560288..2562042) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462356 YP_001422033.1 CDS greA NC_009725.1 2562096 2562569 R necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA complement(2562096..2562569) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462357 YP_001422034.1 CDS udk NC_009725.1 2562823 2563458 R functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor; uridine kinase complement(2562823..2563458) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462358 YP_001422035.1 CDS yrrO NC_009725.1 2563465 2564733 R protease YrrO; hypothetical protein complement(2563465..2564733) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462359 YP_001422036.1 CDS yrrN NC_009725.1 2564751 2565680 R protease YrrN; hypothetical protein complement(2564751..2565680) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462360 YP_001422037.1 CDS yrrM NC_009725.1 2565687 2566340 R caffeoyl-CoA O-methyltransferase YrrM; hypothetical protein complement(2565687..2566340) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461305 YP_001422038.1 CDS yrrL NC_009725.1 2566492 2567583 R conserved hypothetical protein YrrL; hypothetical protein complement(2566492..2567583) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461306 YP_001422039.1 CDS yrzB NC_009725.1 2567694 2567975 R conserved hypothetical protein YrzB; hypothetical protein complement(2567694..2567975) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461307 YP_001422040.1 CDS yrrK NC_009725.1 2567988 2568404 R similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein complement(2567988..2568404) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461308 YP_001422041.1 CDS yrzL NC_009725.1 2568413 2568679 R conserved hypothetical protein YrzL; hypothetical protein complement(2568413..2568679) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461309 YP_001422042.1 CDS alaS NC_009725.1 2568764 2571400 R Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase complement(2568764..2571400) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461310 YP_001422043.1 CDS yrrI NC_009725.1 2571732 2572793 R conserved hypothetical protein YrrI; hypothetical protein complement(2571732..2572793) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463248 YP_001422044.1 CDS glnQ NC_009725.1 2573014 2573742 D glutamine ABC transporter (ATP-binding protein) GlnQ; hypothetical protein 2573014..2573742 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463249 YP_001422045.1 CDS glnH NC_009725.1 2573763 2574590 D glutamine ABC transporter (glutamine-binding protein) GlnH; GlnH 2573763..2574590 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463250 YP_001422046.1 CDS glnM NC_009725.1 2574647 2575297 D glutamine ABC transporter (integral membrane protein) GlnM; GlnM 2574647..2575297 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463251 YP_001422047.1 CDS glnP NC_009725.1 2575316 2575972 D glutamine ABC transporter (integral membrane protein) GlnP; GlnP 2575316..2575972 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463252 YP_001422048.1 CDS RBAM_024570 NC_009725.1 2576161 2576352 R hypothetical protein complement(2576161..2576352) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463253 YP_001422049.1 CDS yrrD NC_009725.1 2576365 2576883 R conserved hypothetical protein YrrD; hypothetical protein complement(2576365..2576883) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460602 YP_001422050.1 CDS yrrC NC_009725.1 2576942 2579320 R conserved hypothetical protein YrrC; hypothetical protein complement(2576942..2579320) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460603 YP_001422051.1 CDS yrrB NC_009725.1 2579339 2579989 R conserved hypothetical protein YrrB; hypothetical protein complement(2579339..2579989) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460604 YP_001422052.1 CDS mnmA NC_009725.1 2580047 2581162 R catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA complement(2580047..2581162) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460605 YP_001422053.1 CDS yrvO NC_009725.1 2581199 2582338 R conserved hypothetical protein YrvO; hypothetical protein complement(2581199..2582338) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460606 YP_001422054.1 CDS yrzC NC_009725.1 2582357 2582773 R conserved hypothetical protein YrzC; hypothetical protein complement(2582357..2582773) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460607 YP_001422055.1 CDS yrvN NC_009725.1 2582968 2584236 D conserved hypothetical protein YrvN; recombination factor protein RarA 2582968..2584236 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462059 YP_001422056.1 CDS yrvM NC_009725.1 2584353 2585117 R conserved hypothetical protein YrvM; hypothetical protein complement(2584353..2585117) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462060 YP_001422057.1 CDS aspS NC_009725.1 2585443 2587221 R catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase complement(2585443..2587221) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462061 YP_001422058.1 CDS hisS NC_009725.1 2587236 2588510 R catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase complement(2587236..2588510) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462062 YP_001422059.1 CDS yrzK NC_009725.1 2588867 2589037 R hypothetical protein YrzK; hypothetical protein complement(2588867..2589037) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462063 YP_001422060.1 CDS yrvJ NC_009725.1 2589168 2590730 D N-acetylmuramoyl-L-alanine amidase YrvJ; hypothetical protein 2589168..2590730 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462064 YP_001422061.1 CDS yrvI NC_009725.1 2590757 2591200 R hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase complement(2590757..2591200) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460660 YP_001422062.1 CDS relA NC_009725.1 2591213 2593417 R GTP pyrophosphokinase RelA; RelA complement(2591213..2593417) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460661 YP_001422063.1 CDS apt NC_009725.1 2593575 2594087 R catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase complement(2593575..2594087) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460662 YP_001422064.1 CDS yrvE NC_009725.1 2595067 2596452 R single-strand DNA-specific exonuclease YrvE; hypothetical protein complement(2595067..2596452) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460663 YP_001422065.1 CDS yrvD NC_009725.1 2596508 2596834 R conserved hypothetical protein YrvD; hypothetical protein complement(2596508..2596834) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460664 YP_001422066.1 CDS yrvC NC_009725.1 2596898 2597395 R conserved hypothetical protein YrvC; hypothetical protein complement(2596898..2597395) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460665 YP_001422067.1 CDS secDF NC_009725.1 2597527 2599746 R part of the preprotein secretory system; forms a complex with protein YajC; SecDFyajC stimulates the proton motive force-driven protein translocation, seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; bifunctional preprotein translocase subunit SecD/SecF complement(2597527..2599746) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460101 YP_001422068.1 CDS yrzD NC_009725.1 2599783 2600079 R hypothetical protein YrzD; hypothetical protein complement(2599783..2600079) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460102 YP_001422069.1 CDS spoVB NC_009725.1 2600195 2601751 D stage V sporulation protein B (SpoVB); SpoVB 2600195..2601751 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460103 YP_001422070.1 CDS yrbG NC_009725.1 2601759 2602415 R conserved hypothetical protein YrbG; hypothetical protein complement(2601759..2602415) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460104 YP_001422071.1 CDS yrzE NC_009725.1 2602543 2602968 D hypothetical protein YrzE; hypothetical protein 2602543..2602968 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460105 YP_001422072.1 CDS yajC NC_009725.1 2603020 2603280 R member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; preprotein translocase subunit YajC complement(2603020..2603280) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460106 YP_001422073.1 CDS tgt NC_009725.1 2603311 2604456 R Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase complement(2603311..2604456) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462891 YP_001422074.1 CDS queA NC_009725.1 2604484 2605512 R Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine:tRNA ribosyltransferase-isomerase complement(2604484..2605512) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462892 YP_001422075.1 CDS ruvB NC_009725.1 2605731 2606735 R promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB complement(2605731..2606735) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462893 YP_001422076.1 CDS ruvA NC_009725.1 2606746 2607351 R plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA complement(2606746..2607351) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462894 YP_001422077.1 CDS bofC NC_009725.1 2607486 2607995 R bypass-of-forespore protein C (BofC); BofC complement(2607486..2607995) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462895 YP_001422078.1 CDS RBAM_024870 NC_009725.1 2608127 2608366 R hypothetical protein complement(2608127..2608366) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462896 YP_001422079.1 CDS coxA NC_009725.1 2608380 2608895 R spore cortex protein CoxA; hypothetical protein complement(2608380..2608895) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462458 YP_001422080.1 CDS safA NC_009725.1 2609121 2610341 R spoVID associated morphogenetic protein SafA; SafA complement(2609121..2610341) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462459 YP_001422081.1 CDS nadA NC_009725.1 2610468 2611571 R 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase complement(2610468..2611571) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462460 YP_001422082.1 CDS nadC NC_009725.1 2611573 2612421 R catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide; nicotinate-nucleotide pyrophosphorylase complement(2611573..2612421) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462461 YP_001422083.1 CDS nadB NC_009725.1 2612403 2613968 R catalyzes the formation of oxaloacetate from L-aspartate; L-aspartate oxidase complement(2612403..2613968) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462462 YP_001422084.1 CDS nifS NC_009725.1 2614074 2615225 D catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis; cysteine desulfurase 2614074..2615225 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462463 YP_001422085.1 CDS yrxA NC_009725.1 2615222 2615764 D conserved hypothetical protein YrxA; hypothetical protein 2615222..2615764 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460204 YP_001422086.1 CDS pheA NC_009725.1 2615791 2616648 R catalyzes the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis; prephenate dehydratase complement(2615791..2616648) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460205 YP_001422087.1 CDS pheB NC_009725.1 2616662 2617111 R chorismate mutase PheB; hypothetical protein complement(2616662..2617111) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460206 YP_001422088.1 CDS obgE NC_009725.1 2617159 2618445 R essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE complement(2617159..2618445) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460207 YP_001422089.1 CDS spo0B NC_009725.1 2618477 2619055 R sporulation initiation phosphotransferase B (Spo0B); Spo0B complement(2618477..2619055) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460208 YP_001422090.1 CDS rpmA NC_009725.1 2619373 2619657 R involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 complement(2619373..2619657) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460209 YP_001422091.1 CDS ysxB NC_009725.1 2619670 2620011 R conserved hypothetical protein YsxB; hypothetical protein complement(2619670..2620011) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461318 YP_001422092.1 CDS rplU NC_009725.1 2620014 2620322 R 50S ribosomal protein L21 (BL20) RplU; 50S ribosomal protein L21 complement(2620014..2620322) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461319 YP_001422093.1 CDS spoIVFB NC_009725.1 2620468 2621334 R stage IV sporulation protein FB (SpoIVFB); hypothetical protein complement(2620468..2621334) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461320 YP_001422094.1 CDS spoIVFA NC_009725.1 2621327 2622130 R stage IV sporulation protein FA (SpoIVFA); SpoIVFA complement(2621327..2622130) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461321 YP_001422095.1 CDS minD NC_009725.1 2622258 2623067 R septum site-determining protein MinD; hypothetical protein complement(2622258..2623067) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461322 YP_001422096.1 CDS minC NC_009725.1 2623064 2623744 R blocks the formation of polar Z-ring septums; septum formation inhibitor complement(2623064..2623744) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461323 YP_001422097.1 CDS mreD NC_009725.1 2623798 2624316 R rod shape-determining protein MreD; hypothetical protein complement(2623798..2624316) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459504 YP_001422098.1 CDS mreC NC_009725.1 2624313 2625176 R in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC complement(2624313..2625176) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459505 YP_001422099.1 CDS mreB NC_009725.1 2625207 2626220 R functions in MreBCD complex in some organisms; rod shape-determining protein MreB complement(2625207..2626220) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459506 YP_001422100.1 CDS radC NC_009725.1 2626312 2627007 R Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC complement(2626312..2627007) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459507 YP_001422101.1 CDS maf NC_009725.1 2627039 2627608 R Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein complement(2627039..2627608) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459508 YP_001422102.1 CDS spoIIB NC_009725.1 2627749 2628750 R endospore development protein SpoIIB; SpoIIB complement(2627749..2628750) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459509 YP_001422103.1 CDS comC NC_009725.1 2628877 2629629 R type 4 prepilin-like proteins leader peptide-processing enzyme ComC; hypothetical protein complement(2628877..2629629) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462289 YP_001422104.1 CDS folC NC_009725.1 2629769 2631061 R folyl-polyglutamate synthetase FolC; hypothetical protein complement(2629769..2631061) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462290 YP_001422105.1 CDS valS NC_009725.1 2631120 2633762 R valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase complement(2631120..2633762) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462291 YP_001422106.1 CDS RBAM_025150 NC_009725.1 2634215 2634406 D hypothetical protein 2634215..2634406 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462292 YP_001422107.1 CDS ysxE NC_009725.1 2634421 2635443 R hypothetical protein YsxE; hypothetical protein complement(2634421..2635443) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462293 YP_001422108.1 CDS spoVID NC_009725.1 2635477 2637318 R spore coat assembly protein (SpoVID); SpoVID complement(2635477..2637318) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462294 YP_001422109.1 CDS hemL NC_009725.1 2637451 2638740 R Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase complement(2637451..2638740) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460782 YP_001422110.1 CDS hemB NC_009725.1 2638769 2639746 R catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase complement(2638769..2639746) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460783 YP_001422111.1 CDS hemD NC_009725.1 2639749 2640528 R uroporphyrinogen III cosynthase HemD; hypothetical protein complement(2639749..2640528) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460784 YP_001422112.1 CDS hemC NC_009725.1 2640518 2641459 R transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase complement(2640518..2641459) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460785 YP_001422113.1 CDS hemX NC_009725.1 2641494 2642324 R membrane-bound protein HemX; HemX complement(2641494..2642324) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460786 YP_001422114.1 CDS hemA NC_009725.1 2642332 2643708 R catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase complement(2642332..2643708) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460787 YP_001422115.1 CDS ysxD NC_009725.1 2643894 2644385 D hypothetical protein YsxD; hypothetical protein 2643894..2644385 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463234 YP_001422116.1 CDS engB NC_009725.1 2644418 2645005 R binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC complement(2644418..2645005) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463235 YP_001422117.1 CDS lonA NC_009725.1 2645002 2647326 R ATP-dependent protease La 1 LonA; LonA complement(2645002..2647326) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463236 YP_001422118.1 CDS lonB NC_009725.1 2647526 2649184 R lon-like ATP-dependent protease LonB; hypothetical protein complement(2647526..2649184) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463237 YP_001422119.1 CDS clpX NC_009725.1 2649334 2650596 R binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX complement(2649334..2650596) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463238 YP_001422120.1 CDS tig NC_009725.1 2650868 2652142 R Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor complement(2650868..2652142) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463239 YP_001422121.1 CDS ysoA NC_009725.1 2652359 2653363 R conserved hypothetical protein YsoA; hypothetical protein complement(2652359..2653363) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462131 YP_001422122.1 CDS leuD NC_009725.1 2653481 2654080 R catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit complement(2653481..2654080) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462132 YP_001422123.1 CDS leuC NC_009725.1 2654096 2655514 R dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit complement(2654096..2655514) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462133 YP_001422124.1 CDS leuB NC_009725.1 2655564 2656661 R catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase complement(2655564..2656661) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462134 YP_001422125.1 CDS leuA NC_009725.1 2656682 2658238 R catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase complement(2656682..2658238) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462135 YP_001422126.1 CDS ilvC NC_009725.1 2658225 2659253 R catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase complement(2658225..2659253) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462136 YP_001422127.1 CDS ilvH NC_009725.1 2659276 2659794 R with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit complement(2659276..2659794) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459569 YP_001422128.1 CDS ilvB NC_009725.1 2659791 2661584 R catalyzes the formation of 2-acetolactate from pyruvate; also known as acetolactate synthase large subunit; acetolactate synthase catalytic subunit complement(2659791..2661584) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459570 YP_001422129.1 CDS RBAM_025380 NC_009725.1 2662307 2662531 R hypothetical protein complement(2662307..2662531) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459571 YP_001422130.1 CDS RBAM_025390 NC_009725.1 2662699 2662884 R hypothetical protein complement(2662699..2662884) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459572 YP_001422131.1 CDS ysnB NC_009725.1 2663520 2664029 R conserved hypothetical protein YsnB; hypothetical protein complement(2663520..2664029) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461063 YP_001422132.1 CDS ysnA NC_009725.1 2664045 2664632 R hydrolyzes non-standard nucleotides such as xanthine and inosine; nucleoside-triphosphatase complement(2664045..2664632) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461064 YP_001422133.1 CDS rph NC_009725.1 2664653 2665390 R RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH complement(2664653..2665390) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461065 YP_001422134.1 CDS gerM NC_009725.1 2665500 2666585 R germination protein GerM; GerM complement(2665500..2666585) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461066 YP_001422135.1 CDS racE NC_009725.1 2666691 2667509 R converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase complement(2666691..2667509) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461586 YP_001422136.1 CDS ysmB NC_009725.1 2667517 2667957 R conserved hypothetical protein YsmB; hypothetical protein complement(2667517..2667957) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461587 YP_001422137.1 CDS gerE NC_009725.1 2668144 2668368 R germination protein GerE; GerE complement(2668144..2668368) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461588 YP_001422138.1 CDS ysmA NC_009725.1 2668489 2668926 R conserved hypothetical protein YsmA; hypothetical protein complement(2668489..2668926) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461589 YP_001422139.1 CDS sdhB NC_009725.1 2668986 2669744 R part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit complement(2668986..2669744) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461590 YP_001422140.1 CDS sdhA NC_009725.1 2669747 2671507 R part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit complement(2669747..2671507) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461591 YP_001422141.1 CDS sdhC NC_009725.1 2671541 2672149 R succinate dehydrogenase (cytochrome b-558 subunit) SdhC; hypothetical protein complement(2671541..2672149) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460299 YP_001422142.1 CDS yslB NC_009725.1 2672446 2672892 D hypothetical protein YslB; hypothetical protein 2672446..2672892 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460300 YP_001422143.1 CDS lysC NC_009725.1 2672939 2674168 R catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase complement(2672939..2674168) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460301 YP_001422144.1 CDS uvrC NC_009725.1 2674535 2676307 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C complement(2674535..2676307) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460302 YP_001422145.1 CDS trxA NC_009725.1 2676451 2676765 R thioredoxin TrxA; hypothetical protein complement(2676451..2676765) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460303 YP_001422146.1 CDS xsa NC_009725.1 2676918 2678408 R alpha-N-arabinofuranosidase II Xsa; Xsa complement(2676918..2678408) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460304 YP_001422147.1 CDS etfA NC_009725.1 2678622 2679599 R electron transfer flavoprotein (alpha subunit) involved in calcium carbonate precipitation; EtfA complement(2678622..2679599) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460311 YP_001422148.1 CDS etfB NC_009725.1 2679631 2680404 R electron transfer flavoprotein (beta subunit); EtfB complement(2679631..2680404) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460312 YP_001422149.1 CDS ysiB NC_009725.1 2680418 2681197 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(2680418..2681197) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460313 YP_001422150.1 CDS ysiA NC_009725.1 2681211 2681801 R transcriptional regulator (TetR/AcrR family) YsiA; hypothetical protein complement(2681211..2681801) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460314 YP_001422151.1 CDS lcfA NC_009725.1 2681884 2683572 R long chain acyl-CoA synthetase LcfA; LcfA complement(2681884..2683572) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460315 YP_001422152.1 CDS ywbB NC_009725.1 2683678 2684352 D hypothetical protein YwbB; hypothetical protein 2683678..2684352 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460316 YP_001422153.1 CDS yshE NC_009725.1 2684491 2684895 R conserved hypothetical protein YshE; hypothetical protein complement(2684491..2684895) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461040 YP_001422154.1 CDS mutSB NC_009725.1 2684912 2687269 R MutS2; MutS-II; involved in blocking homologous and homeologous recombination; has ATPase activity stimulated by recombination intermediates; inhibits DNA strand exchange; recombination and DNA strand exchange inhibitor protein complement(2684912..2687269) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461041 YP_001422155.1 CDS yshC NC_009725.1 2687290 2689002 R DNA-dependent DNA polymerase beta chain YshC; hypothetical protein complement(2687290..2689002) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461042 YP_001422156.1 CDS yshB NC_009725.1 2689108 2689641 R hypothetical protein YshB; hypothetical protein complement(2689108..2689641) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461043 YP_001422157.1 CDS yshA NC_009725.1 2689649 2689906 R conserved hypothetical protein YshA; cell division protein ZapA complement(2689649..2689906) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461044 YP_001422158.1 CDS rnhC NC_009725.1 2690040 2690981 D An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease HIII 2690040..2690981 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461045 YP_001422159.1 CDS pheT NC_009725.1 2691018 2693432 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta complement(2691018..2693432) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463034 YP_001422160.1 CDS pheS NC_009725.1 2693446 2694483 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha complement(2693446..2694483) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463035 YP_001422161.1 CDS ysgA NC_009725.1 2694842 2695588 R conserved hypothetical protein YsgA; hypothetical protein complement(2694842..2695588) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463036 YP_001422162.1 CDS sspI NC_009725.1 2695709 2695924 D small acid-soluble spore protein SspI 2695709..2695924 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463037 YP_001422163.1 CDS ysfB NC_009725.1 2695986 2697071 D conserved hypothetical protein YsfB; hypothetical protein 2695986..2697071 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463038 YP_001422164.1 CDS ysfC NC_009725.1 2697171 2698583 D glycolate oxidase subunit YsfC; hypothetical protein 2697171..2698583 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463039 YP_001422165.1 CDS ysfD NC_009725.1 2698580 2699908 D glycolate oxidase subunit YsfD; hypothetical protein 2698580..2699908 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461641 YP_001422166.1 CDS cstA NC_009725.1 2699979 2701775 R carbon starvation protein CstA; hypothetical protein complement(2699979..2701775) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461642 YP_001422167.1 CDS abfA NC_009725.1 2701886 2703385 R alpha-L-arabinofuranosidase I AbfA; AbfA complement(2701886..2703385) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461643 YP_001422168.1 CDS araQ NC_009725.1 2703404 2704246 R L-arabinose transport system permease protein AraQ; AraQ complement(2703404..2704246) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461644 YP_001422169.1 CDS araP NC_009725.1 2704250 2705191 R L-arabinose transport system permease protein AraP; AraP complement(2704250..2705191) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461645 YP_001422170.1 CDS araN NC_009725.1 2705233 2706528 R probable arabinose-binding protein precursor AraN; AraN complement(2705233..2706528) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461646 YP_001422171.1 CDS araM NC_009725.1 2706560 2707744 R arabinose operon protein M (AraM); AraM complement(2706560..2707744) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462378 YP_001422172.1 CDS araL NC_009725.1 2707741 2708538 R arabinose operon protein L (AraL); AraL complement(2707741..2708538) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462379 YP_001422173.1 CDS araD NC_009725.1 2708525 2709214 R catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source; L-ribulose-5-phosphate 4-epimerase complement(2708525..2709214) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462380 YP_001422174.1 CDS araB NC_009725.1 2709207 2710892 R catalyzes the phosphorylation of ribulose to ribulose 5-phosphate; ribulokinase complement(2709207..2710892) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462381 YP_001422175.1 CDS araA NC_009725.1 2710894 2712393 R catalyzes the formation of L-ribulose from L-arabinose in L-arabinose catabolism; L-arabinose isomerase complement(2710894..2712393) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462382 YP_001422176.1 CDS abnA NC_009725.1 2712571 2713536 R arabinan-endo 1,5-alpha-L-arabinase AbnA; AbnA complement(2712571..2713536) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462383 YP_001422177.1 CDS ysdC NC_009725.1 2713678 2714763 R COG1363; endo-1,4-beta-glucanase; hypothetical protein complement(2713678..2714763) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459809 YP_001422178.1 CDS ysdB NC_009725.1 2714947 2715339 D hypothetical protein YsdB; hypothetical protein 2714947..2715339 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459810 YP_001422179.1 CDS ysdA NC_009725.1 2715353 2715619 R conserved hypothetical protein YsdA; hypothetical protein complement(2715353..2715619) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459811 YP_001422180.1 CDS rplT NC_009725.1 2715677 2716036 R binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 complement(2715677..2716036) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459812 YP_001422181.1 CDS rpmI NC_009725.1 2716068 2716268 R 50S ribosomal protein L35 RpmI; 50S ribosomal protein L35 complement(2716068..2716268) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459813 YP_001422182.1 CDS infC NC_009725.1 2716281 2716784 R IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 complement(2716281..2716784) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459814 YP_001422183.1 CDS ysbB NC_009725.1 2717174 2717857 R in conjunction with LrgA this protein inhibits the expression or activity of extracellular murein hydrolases; antiholin-like protein LrgB complement(2717174..2717857) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460666 YP_001422184.1 CDS ysbA NC_009725.1 2717870 2718307 R negatively regulates murein hydrolase activity; murein hydrolase regulator LrgA complement(2717870..2718307) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460667 YP_001422185.1 CDS lytT NC_009725.1 2718437 2719171 R two-component response regulator; COG3279, RR of the LytR/AlgR family, two component signal transduction system controlling rate of autolysis; hypothetical protein complement(2718437..2719171) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460668 YP_001422186.1 CDS lytS NC_009725.1 2719149 2720930 R sensor histidine kinase controlling autolysis; transcription control of biofilm formation; hypothetical protein complement(2719149..2720930) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460669 YP_001422187.1 CDS ysaA NC_009725.1 2721117 2721911 D conserved hypothetical protein YsaA; hypothetical protein 2721117..2721911 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460670 YP_001422188.1 CDS thrS NC_009725.1 2721966 2723897 R catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase complement(2721966..2723897) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460671 YP_001422189.1 CDS ytxC NC_009725.1 2724307 2725137 R hypothetical protein YtxC; hypothetical protein complement(2724307..2725137) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460020 YP_001422190.1 CDS ytxB NC_009725.1 2725203 2725844 R conserved hypothetical protein YtxB; hypothetical protein complement(2725203..2725844) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460021 YP_001422191.1 CDS dnaI NC_009725.1 2725876 2726811 R Primosomal protein that may act to load helicase DnaC during DNA replication; primosomal protein DnaI complement(2725876..2726811) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460022 YP_001422192.1 CDS dnaB NC_009725.1 2726836 2728245 R replication initiation and membrane attachment protein DnaB; hypothetical protein complement(2726836..2728245) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460023 YP_001422193.1 CDS nrdR NC_009725.1 2728357 2728815 R conserved hypothetical protein YtcG; transcriptional regulator NrdR complement(2728357..2728815) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460024 YP_001422194.1 CDS speD NC_009725.1 2729064 2729450 R Decarboxylation of S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine; S-adenosylmethionine decarboxylase proenzyme complement(2729064..2729450) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460025 YP_001422195.1 CDS gapB NC_009725.1 2729683 2730705 R NADP-dependent; catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; active during gluconeogenesis; glyceraldehyde-3-phosphate dehydrogenase complement(2729683..2730705) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459905 YP_001422196.1 CDS ytcD NC_009725.1 2730914 2731300 R conserved hypothetical protein YtcD; hypothetical protein complement(2730914..2731300) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459906 YP_001422197.1 CDS ytbD NC_009725.1 2731484 2732683 D arabinose efflux permease YtbD; hypothetical protein 2731484..2732683 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459907 YP_001422198.1 CDS ytbE NC_009725.1 2732742 2733584 D plant metabolite dehydrogenase YtbE; hypothetical protein 2732742..2733584 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459908 YP_001422199.1 CDS coaE NC_009725.1 2733623 2734216 R catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase complement(2733623..2734216) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459909 YP_001422200.1 CDS ytaF NC_009725.1 2734232 2734849 R conserved hypothetical protein YtaF; hypothetical protein complement(2734232..2734849) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459910 YP_001422201.1 CDS mutM NC_009725.1 2735001 2735837 R Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase complement(2735001..2735837) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463299 YP_001422202.1 CDS polA NC_009725.1 2735856 2738495 R has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I complement(2735856..2738495) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463300 YP_001422203.1 CDS phoR NC_009725.1 2738742 2740481 R sensor protein histidine kinase; COG5002, VicK; HK involved in global regulation of the pho regulon; PhoR complement(2738742..2740481) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463301 YP_001422204.1 CDS phoP NC_009725.1 2740474 2741193 R two-component response regulator; COG0745, OmpR like RR consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; global regulation of the pho regulon; PhoP complement(2740474..2741193) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463302 YP_001422205.1 CDS mdh NC_009725.1 2741409 2742347 R Catalyzes the reversible oxidation of malate to oxaloacetate; malate dehydrogenase complement(2741409..2742347) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463303 YP_001422206.1 CDS icd NC_009725.1 2742393 2743664 R Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase complement(2742393..2743664) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463304 YP_001422207.1 CDS citZ NC_009725.1 2743825 2744943 R catalyzes the formation of citrate from acetyl-CoA and oxaloacetate; citrate synthase complement(2743825..2744943) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460986 YP_001422208.1 CDS yjdF NC_009725.1 2745688 2746098 R hypothetical protein YjdF; hypothetical protein complement(2745688..2746098) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460987 YP_001422209.1 CDS ytwI NC_009725.1 2746518 2746982 R conserved hypothetical protein YtwI; hypothetical protein complement(2746518..2746982) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460988 YP_001422210.1 CDS ytvI NC_009725.1 2747079 2748194 D conserved hypothetical protein YtvI; hypothetical protein 2747079..2748194 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460989 YP_001422211.1 CDS fxsA NC_009725.1 2748226 2748609 R F exclusion of bacteriophage T7; overproduction of this protein in Escherichia coli inhibits the F plasmid-mediated exclusion of bacteriophage T7; interacts with the F plasmid-encoded PifA protein; inner membrane protein; FxsA complement(2748226..2748609) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460990 YP_001422212.1 CDS pyk NC_009725.1 2748720 2750477 R catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase complement(2748720..2750477) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460991 YP_001422213.1 CDS pfkA NC_009725.1 2750517 2751476 R catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis; 6-phosphofructokinase complement(2750517..2751476) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460684 YP_001422214.1 CDS accA NC_009725.1 2751668 2752645 R catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha complement(2751668..2752645) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460685 YP_001422215.1 CDS accD NC_009725.1 2752630 2753502 R catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta complement(2752630..2753502) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460686 YP_001422216.1 CDS ytsJ NC_009725.1 2753831 2755063 R NAD-dependent malic enzyme IV YtsJ; hypothetical protein complement(2753831..2755063) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460687 YP_001422217.1 CDS dnaE NC_009725.1 2755203 2758550 R catalyzes DNA-template-directed extension of the 3'-end of a DNA strand by one nucleotide at a time. Proposed to be responsible for the synthesis of the lagging strand. In the low GC gram positive bacteria this enzyme is less processive and more error prone than its counterpart in other bacteria.; DNA polymerase III DnaE complement(2755203..2758550) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460688 YP_001422218.1 CDS RBAM_026290 NC_009725.1 2758684 2759025 D hypothetical protein 2758684..2759025 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460689 YP_001422219.1 CDS ytrI NC_009725.1 2759022 2759525 D hypothetical protein YtrI; hypothetical protein 2759022..2759525 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462700 YP_001422220.1 CDS ytqI NC_009725.1 2759840 2760781 R conserved hypothetical protein YtqI; hypothetical protein complement(2759840..2760781) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462701 YP_001422221.1 CDS ytpI NC_009725.1 2760898 2761200 D hypothetical protein YtpI; hypothetical protein 2760898..2761200 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462702 YP_001422222.1 CDS ytoI NC_009725.1 2761229 2762545 R conserved hypothetical protein YtoI; hypothetical protein complement(2761229..2762545) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462703 YP_001422223.1 CDS ytkL NC_009725.1 2762684 2763370 R catalyzes the opening and hydrolysis of the beta-lactam ring of beta-lactam antibiotics such as penicillins and cephalosporins; metal-dependent hydrolase complement(2762684..2763370) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462704 YP_001422224.1 CDS fabG NC_009725.1 2763431 2764198 R catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase complement(2763431..2764198) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462705 YP_001422225.1 CDS ytzD NC_009725.1 2764336 2764464 R hypothetical protein YtzD; hypothetical protein complement(2764336..2764464) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461720 YP_001422226.1 CDS argH NC_009725.1 2764538 2765914 R catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase complement(2764538..2765914) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461721 YP_001422227.1 CDS argG NC_009725.1 2765911 2767122 R catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase complement(2765911..2767122) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461722 YP_001422228.1 CDS moaB NC_009725.1 2767275 2767787 R molybdopterin precursor biosynthesis protein B (MoaB); hypothetical protein complement(2767275..2767787) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461723 YP_001422229.1 CDS ackA NC_009725.1 2767887 2769074 R AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase complement(2767887..2769074) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461724 YP_001422230.1 CDS ytxK NC_009725.1 2769385 2770371 R conserved hypothetical protein YtxK; hypothetical protein complement(2769385..2770371) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461725 YP_001422231.1 CDS tpx NC_009725.1 2770433 2770936 R antioxidant activity; thioredoxin-dependent thiol peroxidase; forms homodimers in solution; shows substrate specificity to alkyl hydroperoxides; periplasmic protein; thiol peroxidase complement(2770433..2770936) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462928 YP_001422232.1 CDS ytfJ NC_009725.1 2771052 2771492 R conserved hypothetical protein YtfJ; hypothetical protein complement(2771052..2771492) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462929 YP_001422233.1 CDS ytfI NC_009725.1 2771505 2772194 R hypothetical protein YtfI; hypothetical protein complement(2771505..2772194) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462930 YP_001422234.1 CDS yteJ NC_009725.1 2772272 2772763 R conserved hypothetical protein YteJ; hypothetical protein complement(2772272..2772763) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462931 YP_001422235.1 CDS sppA NC_009725.1 2772777 2773784 R signal peptide peptidase SppA; hypothetical protein complement(2772777..2773784) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462932 YP_001422236.1 CDS ppnK NC_009725.1 2773942 2774772 D catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase 2773942..2774772 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462933 YP_001422237.1 CDS ytcJ NC_009725.1 2774789 2776384 R conserved hypothetical protein YtcJ; hypothetical protein complement(2774789..2776384) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461333 YP_001422238.1 CDS ytcI NC_009725.1 2776408 2777994 R conserved hypothetical protein YtcI; hypothetical protein complement(2776408..2777994) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461334 YP_001422239.1 CDS sspA NC_009725.1 2778143 2778364 R small acid-soluble spore protein SspA; hypothetical protein complement(2778143..2778364) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461335 YP_001422240.1 CDS thiI NC_009725.1 2778445 2779650 R Required for the synthesis of the thiazole moiety; thiamine biosynthesis protein ThiI complement(2778445..2779650) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461336 YP_001422241.1 CDS nifZ NC_009725.1 2779654 2780799 R nifS protein homolog NifZ; NifZ complement(2779654..2780799) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461337 YP_001422242.1 CDS braB NC_009725.1 2780993 2782333 D branched-chain amino acid transport system carrier protein BraB; BraB 2780993..2782333 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461338 YP_001422243.1 CDS ezrA NC_009725.1 2782447 2784138 R acts to negatively regulates ftsZ ring formation by modulating the frequency and position of the ftsZ ring formation; septation ring formation regulator EzrA complement(2782447..2784138) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463056 YP_001422244.1 CDS hisJ NC_009725.1 2784334 2785146 D catalyzes the formation of L-histidinol from L-histidinol phosphate; histidinol-phosphatase 2784334..2785146 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463057 YP_001422245.1 CDS yttP NC_009725.1 2785136 2785759 R HTH-type transcription regulator (Stress response protein) YttP; hypothetical protein complement(2785136..2785759) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463058 YP_001422246.1 CDS ytsP NC_009725.1 2785885 2786367 D conserved hypothetical protein YtsP; hypothetical protein 2785885..2786367 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463059 YP_001422247.1 CDS ytrP NC_009725.1 2786402 2788150 R conserved hypothetical protein YtrP; hypothetical protein complement(2786402..2788150) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463060 YP_001422248.1 CDS rpsD NC_009725.1 2788441 2789043 D primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 2788441..2789043 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463061 YP_001422249.1 CDS ywdH NC_009725.1 2789299 2790669 D aldehyde dehydrogenase YwdH; hypothetical protein 2789299..2790669 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460654 YP_001422250.1 CDS yokH NC_009725.1 2790806 2791363 R hypothetical protein [bacteriophage SPBc2] YokH; hypothetical protein complement(2790806..2791363) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460655 YP_001422251.1 CDS RBAM_026620 NC_009725.1 2791859 2792023 R N-terminus; phage-related Zn finger domain-containing protein complement(2791859..2792023) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460656 YP_001422252.1 CDS RBAM_026630 NC_009725.1 2792410 2793174 R hypothetical protein complement(2792410..2793174) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460657 YP_001422253.1 CDS RBAM_026640 NC_009725.1 2793282 2794067 R hypothetical protein complement(2793282..2794067) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460658 YP_001422254.1 CDS RBAM_026650 NC_009725.1 2794434 2794658 D hypothetical protein 2794434..2794658 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460659 YP_001422255.1 CDS RBAM_026660 NC_009725.1 2794650 2795165 R Positive regulatory protein that acts at the late promoter PL; positive control sigma-like factor complement(2794650..2795165) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460444 YP_001422256.1 CDS RBAM_026670 NC_009725.1 2795387 2795815 R hypothetical protein complement(2795387..2795815) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460445 YP_001422257.1 CDS RBAM_026680 NC_009725.1 2795906 2796106 R hypothetical protein complement(2795906..2796106) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460446 YP_001422258.1 CDS RBAM_026690 NC_009725.1 2796207 2796434 R hypothetical protein complement(2796207..2796434) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460447 YP_001422259.1 CDS RBAM_026700 NC_009725.1 2796403 2796621 R C-terminus; replicative DNA helicase dnaC complement(2796403..2796621) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460448 YP_001422260.1 CDS hmp NC_009725.1 2796779 2797969 R flavohemoprotein; catalyzes the formation of nitrate from nitric oxide; can also catalyze the reduction of dihydropteridine; nitric oxide dioxygenase complement(2796779..2797969) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460449 YP_001422261.1 CDS yraA NC_009725.1 2798604 2799113 D conserved hypothetical protein YraA; hypothetical protein 2798604..2799113 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460497 YP_001422262.1 CDS RBAM_026730 NC_009725.1 2799406 2800158 R C-terminus; phi ETA orf 55-like protein complement(2799406..2800158) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460498 YP_001422263.1 CDS RBAM_026740 NC_009725.1 2800276 2800623 D hypothetical protein 2800276..2800623 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460499 YP_001422264.1 CDS RBAM_026750 NC_009725.1 2800867 2801736 R hypothetical protein complement(2800867..2801736) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460500 YP_001422265.1 CDS RBAM_026760 NC_009725.1 2801959 2802765 D transcriptional regulator 2801959..2802765 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460501 YP_001422266.1 CDS RBAM_026770 NC_009725.1 2802838 2803569 D amino acid permease 2802838..2803569 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460502 YP_001422267.1 CDS RBAM_026780 NC_009725.1 2803566 2803889 D hypothetical protein 2803566..2803889 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460228 YP_001422268.1 CDS tyrS NC_009725.1 2804175 2805440 R catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase complement(2804175..2805440) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460229 YP_001422269.1 CDS acsA NC_009725.1 2805777 2807495 R Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase complement(2805777..2807495) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460230 YP_001422270.1 CDS acuA NC_009725.1 2807654 2808286 D acetoin utilization protein AcuA; AcuA 2807654..2808286 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460231 YP_001422271.1 CDS acuB NC_009725.1 2808311 2808955 D acetoin dehydrogenase AcuB; AcuB 2808311..2808955 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460232 YP_001422272.1 CDS acuC NC_009725.1 2808952 2810118 D acetoin dehydrogenase AcuC; hypothetical protein 2808952..2810118 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460233 YP_001422273.1 CDS ytxE NC_009725.1 2810128 2810817 R Homolog of MotB, appears to be involved in motility on surfaces or under specific ionic conditions. With MotP (a Mot A homolog) forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine.; flagellar motor protein MotS complement(2810128..2810817) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461352 YP_001422274.1 CDS ytxD NC_009725.1 2810807 2811622 R Homolog of MotA, appears to be involved in motility on surfaces and under different ionic conditions. With MotS (a MotB homolog) forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine.; flagellar motor protein MotP complement(2810807..2811622) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461353 YP_001422275.1 CDS ccpA NC_009725.1 2811691 2812695 R catabolite control protein A (glucose-resistanceamylase regulator) CcpA; hypothetical protein complement(2811691..2812695) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461354 YP_001422276.1 CDS aroA NC_009725.1 2812974 2814050 R catalyzes the formation of 3-deoxy-D-aribino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate and the formation of prephenate from chorismate; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase complement(2812974..2814050) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461355 YP_001422277.1 CDS ytxJ NC_009725.1 2814359 2814613 R conserved hypothetical protein YtxJ; hypothetical protein complement(2814359..2814613) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461356 YP_001422278.1 CDS ytxH NC_009725.1 2814639 2815052 R general stress protein YtxH; hypothetical protein complement(2814639..2815052) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461357 YP_001422279.1 CDS ytxG NC_009725.1 2815085 2815507 R general stress protein YtxG; hypothetical protein complement(2815085..2815507) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459601 YP_001422280.1 CDS murC NC_009725.1 2815663 2816961 R Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase complement(2815663..2816961) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459602 YP_001422281.1 CDS ytpT NC_009725.1 2817202 2819805 R DNA translocase stage III sporulation protein YtpT; hypothetical protein complement(2817202..2819805) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459603 YP_001422282.1 CDS ytpR NC_009725.1 2819973 2820578 R phenylalanyl-tRNA synthetase (beta subunit) YtpR; hypothetical protein complement(2819973..2820578) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459604 YP_001422283.1 CDS ytpQ NC_009725.1 2820593 2821402 R conserved hypothetical protein YtpQ; hypothetical protein complement(2820593..2821402) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459605 YP_001422284.1 CDS ytpP NC_009725.1 2821418 2821741 R thioredoxin YtpP; hypothetical protein complement(2821418..2821741) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459606 YP_001422285.1 CDS ytoQ NC_009725.1 2821939 2822385 D conserved hypothetical protein YtoQ; hypothetical protein 2821939..2822385 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462305 YP_001422286.1 CDS ytoP NC_009725.1 2822419 2823492 R conserved hypothetical protein YtoP; hypothetical protein complement(2822419..2823492) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462306 YP_001422287.1 CDS ytzB NC_009725.1 2823651 2823968 D hypothetical protein YtzB; hypothetical protein 2823651..2823968 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462307 YP_001422288.1 CDS malS NC_009725.1 2824024 2825721 R malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate; malate dehydrogenase complement(2824024..2825721) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462308 YP_001422289.1 CDS ytnP NC_009725.1 2825800 2826645 R hypothetical protein YtnP; hypothetical protein complement(2825800..2826645) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462309 YP_001422290.1 CDS trmB NC_009725.1 2826704 2827357 R tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase complement(2826704..2827357) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462310 YP_001422291.1 CDS ytzH NC_009725.1 2827543 2827821 D hypothetical protein YtzH; hypothetical protein 2827543..2827821 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459582 YP_001422292.1 CDS ytmP NC_009725.1 2827822 2828631 R conserved hypothetical protein YtmP; hypothetical protein complement(2827822..2828631) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459583 YP_001422293.1 CDS ytlR NC_009725.1 2828890 2829819 R conserved hypothetical protein YtlR; hypothetical protein complement(2828890..2829819) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459584 YP_001422294.1 CDS ytlQ NC_009725.1 2829872 2830804 R conserved hypothetical protein YtlQ; hypothetical protein complement(2829872..2830804) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459585 YP_001422295.1 CDS ytlP NC_009725.1 2830831 2831382 R conserved hypothetical protein YtlP; hypothetical protein complement(2830831..2831382) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459586 YP_001422296.1 CDS ytkP NC_009725.1 2831511 2832443 D cysteine synthase YtkP; hypothetical protein 2831511..2832443 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459587 YP_001422297.1 CDS ytjP NC_009725.1 2832481 2833872 R divalent metal ion-dependent extracellular dipeptidase; able to hydrolyze a broad range of dipeptides but no tri-, tetra-, or larger oligopeptides; differences in the amino acid specificity of the cleavage site varies between species; similar to succinyl-diaminopimelate desuccinylases; dipeptidase PepV complement(2832481..2833872) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460317 YP_001422298.1 CDS ytiP NC_009725.1 2833968 2835272 D conserved hypothetical protein YtiP; hypothetical protein 2833968..2835272 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460318 YP_001422299.1 CDS ythQ NC_009725.1 2835307 2836467 R hypothetical protein YthQ; hypothetical protein complement(2835307..2836467) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460319 YP_001422300.1 CDS ythP NC_009725.1 2836464 2837168 R ABC transporter (ATP-binding protein) YthP; hypothetical protein complement(2836464..2837168) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460320 YP_001422301.1 CDS ytzE NC_009725.1 2837449 2837670 D hypothetical protein YtzE; hypothetical protein 2837449..2837670 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460321 YP_001422302.1 CDS ytzF NC_009725.1 2837798 2838517 R pseudouridine synthase YtzF; hypothetical protein complement(2837798..2838517) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460322 YP_001422303.1 CDS ytgP NC_009725.1 2838574 2840211 R spore cortex protein YtgP; hypothetical protein complement(2838574..2840211) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460323 YP_001422304.1 CDS ytfP NC_009725.1 2840434 2841684 D conserved hypothetical protein YtfP; hypothetical protein 2840434..2841684 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459822 YP_001422305.1 CDS opuD NC_009725.1 2841864 2843399 D glycine betaine transporter OpuD; OpuD 2841864..2843399 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459823 YP_001422306.1 CDS yteV NC_009725.1 2843435 2843617 R hypothetical protein yteV (csYteV; hypothetical protein complement(2843435..2843617) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459824 YP_001422307.1 CDS msmR NC_009725.1 2843818 2844843 D transcriptional regulator (LacI family) MsmR; MsmR 2843818..2844843 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459825 YP_001422308.1 CDS msmE NC_009725.1 2844885 2846162 D multiple sugar-binding protein MsmE; MsmE 2844885..2846162 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459826 YP_001422309.1 CDS amyD NC_009725.1 2846159 2847073 D sugar transport protein AmyD; AmyD 2846159..2847073 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459827 YP_001422310.1 CDS amyC NC_009725.1 2847070 2847891 D maltose transport protein AmyC; AmyC 2847070..2847891 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459828 YP_001422311.1 CDS melA NC_009725.1 2847914 2849212 D alpha-D-galactoside galactohydrolase MelA; MelA 2847914..2849212 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462046 YP_001422312.1 CDS RBAM_027230 NC_009725.1 2849249 2849725 R hypothetical protein complement(2849249..2849725) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462047 YP_001422313.1 CDS ytwF NC_009725.1 2849810 2850121 R conserved hypothetical protein YtwF; hypothetical protein complement(2849810..2850121) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462048 YP_001422314.1 CDS leuS NC_009725.1 2850238 2852652 R leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase complement(2850238..2852652) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462049 YP_001422315.1 CDS ytvB NC_009725.1 2853077 2853406 R hypothetical protein YtvB; hypothetical protein complement(2853077..2853406) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462050 YP_001422316.1 CDS ytvA NC_009725.1 2853801 2854586 D conserved hypothetical protein YtvA; hypothetical protein 2853801..2854586 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462051 YP_001422317.1 CDS yttB NC_009725.1 2854629 2855813 R conserved hypothetical protein YttB; hypothetical protein complement(2854629..2855813) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462052 YP_001422318.1 CDS ywaF NC_009725.1 2856009 2856728 R conserved hypothetical protein YwaF; hypothetical protein complement(2856009..2856728) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460906 YP_001422319.1 CDS bceB NC_009725.1 2856835 2858775 R bacitracin export permease protein BceB; BceB complement(2856835..2858775) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460907 YP_001422320.1 CDS bceA NC_009725.1 2858772 2859524 R bacitracin export ATP-binding protein BceA; BceA complement(2858772..2859524) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460908 YP_001422321.1 CDS bceS NC_009725.1 2859630 2860634 R sensor IM histidine kinase; smart00387; member of the two component regulatory system BceS/BceR involved in the regulation of bacitracin resistance; BceS complement(2859630..2860634) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460909 YP_001422322.1 CDS bceR NC_009725.1 2860627 2861322 R sensory transduction protein BceR; BceR complement(2860627..2861322) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460910 YP_001422323.1 CDS ytrF NC_009725.1 2861386 2862696 R hypothetical protein YtrF; hypothetical protein complement(2861386..2862696) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460911 YP_001422324.1 CDS ytrE NC_009725.1 2862686 2863387 R hypothetical ABC transporter ATP-binding protein YtrE; hypothetical protein complement(2862686..2863387) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460912 YP_001422325.1 CDS ytrD NC_009725.1 2863397 2864377 R hypothetical protein YtrD; hypothetical protein complement(2863397..2864377) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460013 YP_001422326.1 CDS ytrC1 NC_009725.1 2864414 2865400 R hypothetical protein yYtrC1; hypothetical protein complement(2864414..2865400) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460014 YP_001422327.1 CDS ytrC NC_009725.1 2865416 2866402 R hypothetical protein YtrC; hypothetical protein complement(2865416..2866402) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460015 YP_001422328.1 CDS ytrB NC_009725.1 2866396 2867274 R ABC transporter (ATP-binding protein) YtrB; hypothetical protein complement(2866396..2867274) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460016 YP_001422329.1 CDS ytrA NC_009725.1 2867267 2867659 R transcription regulator YtrA; hypothetical protein complement(2867267..2867659) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460017 YP_001422330.1 CDS ytzC NC_009725.1 2868007 2868279 R hypothetical protein YtzC; hypothetical protein complement(2868007..2868279) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460018 YP_001422331.1 CDS nrsF NC_009725.1 2868410 2870059 R synthesis of unknown secondary metabolite; COG0318; Acyl-CoA synthetases; NrsF complement(2868410..2870059) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460019 YP_001422332.1 CDS nrsE NC_009725.1 2870066 2871163 R synthesis of unknown secondary metabolite; NrsE complement(2870066..2871163) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460437 YP_001422333.1 CDS nrsD NC_009725.1 2871188 2873947 R synthesis of unkown secondary metabolite; cd00833; predicted polyketide synthase and hydrolase [COG0491]; NrsD complement(2871188..2873947) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460438 YP_001422334.1 CDS nrsC NC_009725.1 2873985 2884220 R synthesis of unknown secondary metabolite; COG1020; non-ribosomal peptide synthetase; NrsC complement(2873985..2884220) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460439 YP_001422335.1 CDS nrsB NC_009725.1 2884217 2885200 R synthesis of unknown secondary metabolite; cd02142, mcbC-like_oxidoreductase; NrsB complement(2884217..2885200) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460440 YP_001422336.1 CDS nrsA NC_009725.1 2885223 2885927 R synthesis of unknown secondary metabolite; thioesterase involved in non-ribosomal peptide synthesis; NrsA complement(2885223..2885927) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460441 YP_001422337.1 CDS RBAM_027480 NC_009725.1 2886193 2887860 D permease MDR type 2886193..2887860 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460442 YP_001422338.1 CDS ytqA NC_009725.1 2887947 2888915 D conserved hypothetical protein YtqA; hypothetical protein 2887947..2888915 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460443 YP_001422339.1 CDS ytqB NC_009725.1 2888912 2889493 D conserved hypothetical protein YtqB; hypothetical protein 2888912..2889493 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462601 YP_001422340.1 CDS RBAM_027510 NC_009725.1 2889826 2890635 R glycerophosphoryl diester phosphodiesterase complement(2889826..2890635) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462602 YP_001422341.1 CDS ytpB NC_009725.1 2890744 2891826 R hypothetical protein YtpB; hypothetical protein complement(2890744..2891826) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462603 YP_001422342.1 CDS ytpA NC_009725.1 2891844 2892623 R lysophospholipase YtpA; hypothetical protein complement(2891844..2892623) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462604 YP_001422343.1 CDS ytoA NC_009725.1 2892667 2893185 D conserved hypothetical protein YtoA; hypothetical protein 2892667..2893185 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462605 YP_001422344.1 CDS ytnA NC_009725.1 2893361 2894764 R amino acid permease YtnA; hypothetical protein complement(2893361..2894764) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462606 YP_001422345.1 CDS asnB NC_009725.1 2894969 2896867 R asparagine synthetase AsnB; hypothetical protein complement(2894969..2896867) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462607 YP_001422346.1 CDS metK NC_009725.1 2897011 2898213 R catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase complement(2897011..2898213) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463173 YP_001422347.1 CDS pckA NC_009725.1 2898720 2900303 D PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 2898720..2900303 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463174 YP_001422348.1 CDS ytmB NC_009725.1 2900346 2900588 R hypothetical protein YtmB; hypothetical protein complement(2900346..2900588) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463175 YP_001422349.1 CDS ytmA NC_009725.1 2900646 2901419 R conserved hypothetical protein YtmA; hypothetical protein complement(2900646..2901419) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463176 YP_001422350.1 CDS ytlA NC_009725.1 2901557 2902561 D ABC-transport system substrate-binding protein YtlA; hypothetical protein 2901557..2902561 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463177 YP_001422351.1 CDS ytlC NC_009725.1 2902573 2903355 D ABC-transport system (ATP-binding protein) YtlC; hypothetical protein 2902573..2903355 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463178 YP_001422352.1 CDS ytlD NC_009725.1 2903330 2904142 D ABC transporter (permease) YtlD; hypothetical protein 2903330..2904142 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463179 YP_001422353.1 CDS ytkD NC_009725.1 2904178 2904657 R hypothetical protein YtkD; hypothetical protein complement(2904178..2904657) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463166 YP_001422354.1 CDS ytkC NC_009725.1 2904790 2905206 R autolytic amidase YtkC; hypothetical protein complement(2904790..2905206) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463167 YP_001422355.1 CDS dps NC_009725.1 2905346 2905783 R DNA-protecting protein Dps; Dps complement(2905346..2905783) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463168 YP_001422356.1 CDS ytkA NC_009725.1 2906054 2906497 R hypothetical protein YtkA; hypothetical protein complement(2906054..2906497) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463169 YP_001422357.1 CDS luxS NC_009725.1 2906612 2907085 R catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2; S-ribosylhomocysteinase complement(2906612..2907085) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463170 YP_001422358.1 CDS ytjA NC_009725.1 2907210 2907437 D conserved hypothetical protein YtjA; hypothetical protein 2907210..2907437 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463171 YP_001422359.1 CDS ytiB NC_009725.1 2907434 2908003 R carbonic anhydrase YtiB; hypothetical protein complement(2907434..2908003) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463172 YP_001422360.1 CDS rpmE2 NC_009725.1 2908122 2908370 R RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 complement(2908122..2908370) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463154 YP_001422361.1 CDS ythA NC_009725.1 2908562 2909899 D cytochrome d oxidase subunit YthA; hypothetical protein 2908562..2909899 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463155 YP_001422362.1 CDS ythB NC_009725.1 2909922 2910962 D conserved hypothetical protein YthB; hypothetical protein 2909922..2910962 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463156 YP_001422363.1 CDS RBAM_027740 NC_009725.1 2911020 2911178 D hypothetical protein 2911020..2911178 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463157 YP_001422364.1 CDS RBAM_027750 NC_009725.1 2911159 2911482 R hypothetical protein complement(2911159..2911482) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463158 YP_001422365.1 CDS menC NC_009725.1 2911562 2912677 R O-succinylbenzoate-CoA synthase MenC; MenC complement(2911562..2912677) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463159 YP_001422366.1 CDS menE NC_009725.1 2912674 2914137 R converts O-succinylbenzoate to O-succinylbenzoyl-CoA; O-succinylbenzoic acid--CoA ligase complement(2912674..2914137) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463160 YP_001422367.1 CDS menB NC_009725.1 2914225 2915043 R catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA; naphthoate synthase complement(2914225..2915043) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463147 YP_001422368.1 CDS ytxM NC_009725.1 2915102 2915926 R prolyl aminopeptidase YtxM; hypothetical protein complement(2915102..2915926) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463148 YP_001422369.1 CDS menD NC_009725.1 2915914 2917650 R SEPHCHC synthase; forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1- carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis; 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase complement(2915914..2917650) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463149 YP_001422370.1 CDS menF NC_009725.1 2917647 2919062 R menaquinone-specific isochorismate synthase MenF; MenF complement(2917647..2919062) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463150 YP_001422371.1 CDS yteA NC_009725.1 2919345 2920064 D conserved hypothetical protein YteA; hypothetical protein 2919345..2920064 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463151 YP_001422372.1 CDS ytaB NC_009725.1 2920221 2920691 D conserved hypothetical protein YtaB; hypothetical protein 2920221..2920691 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463152 YP_001422373.1 CDS yuaJ NC_009725.1 2928211 2928792 D conserved hypothetical protein YuaJ; hypothetical protein 2928211..2928792 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463193 YP_001422374.1 CDS yuaG NC_009725.1 2928823 2930352 R conserved hypothetical protein YuaG; hypothetical protein complement(2928823..2930352) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463194 YP_001422375.1 CDS yuaF NC_009725.1 2930372 2930902 R hypothetical protein YuaF; hypothetical protein complement(2930372..2930902) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463195 YP_001422376.1 CDS yuaE NC_009725.1 2931049 2931537 D hypothetical protein YuaE; hypothetical protein 2931049..2931537 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463196 YP_001422377.1 CDS yuaD NC_009725.1 2931538 2932119 R conserved hypothetical protein YuaD; hypothetical protein complement(2931538..2932119) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463197 YP_001422378.1 CDS gbsB NC_009725.1 2932190 2933386 R alcohol dehydrogenase GbsB; GbsB complement(2932190..2933386) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463186 YP_001422379.1 CDS gbsA NC_009725.1 2933416 2934888 R glycine betaine aldehyde dehydrogenase GbsA; GbsA complement(2933416..2934888) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463187 YP_001422380.1 CDS yuaC NC_009725.1 2935089 2935643 D conserved hypothetical protein YuaC; hypothetical protein 2935089..2935643 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463188 YP_001422381.1 CDS yuaB NC_009725.1 2935798 2936343 D hypothetical protein YuaB; hypothetical protein 2935798..2936343 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463189 YP_001422382.1 CDS yuaA NC_009725.1 2936507 2937175 D conserved hypothetical protein YuaA; hypothetical protein 2936507..2937175 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463190 YP_001422383.1 CDS yubE NC_009725.1 2937209 2938054 R N-acetylmuramoyl-L-alanine amidase YubE; hypothetical protein complement(2937209..2938054) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463191 YP_001422384.1 CDS hmp1 NC_009725.1 2938196 2939371 R flavohemoprotein; catalyzes the formation of nitrate from nitric oxide; can also catalyze the reduction of dihydropteridine; nitric oxide dioxygenase complement(2938196..2939371) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463192 YP_001422385.1 CDS RBAM_028220 NC_009725.1 2939589 2940230 D hypothetical protein 2939589..2940230 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463161 YP_001422386.1 CDS yjcN NC_009725.1 2940291 2940611 R hypothetical protein YjcN; hypothetical protein complement(2940291..2940611) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463162 YP_001422387.1 CDS yubB NC_009725.1 2940925 2941755 R BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase complement(2940925..2941755) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463164 YP_001422388.1 CDS yubA NC_009725.1 2941847 2943007 R conserved hypothetical protein YubA; hypothetical protein complement(2941847..2943007) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463165 YP_001422389.1 CDS yulF NC_009725.1 2943187 2944173 D conserved hypothetical protein YulF; hypothetical protein 2943187..2944173 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463205 YP_001422390.1 CDS RBAM_028280 NC_009725.1 2944205 2944729 R hypothetical protein complement(2944205..2944729) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463206 YP_001422391.1 CDS tlpB NC_009725.1 2944795 2946801 R methyl-accepting chemotaxis protein TlpB; TlpB complement(2944795..2946801) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463207 YP_001422392.1 CDS mcpA NC_009725.1 2946917 2948902 R methyl-accepting chemotaxis protein McpA; McpA complement(2946917..2948902) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463208 YP_001422393.1 CDS tlpA NC_009725.1 2949030 2951018 R methyl-accepting chemotaxis protein TlpA; TlpA complement(2949030..2951018) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463209 YP_001422394.1 CDS mcpB NC_009725.1 2951203 2953188 R methyl-accepting chemotaxis protein McpB; McpB complement(2951203..2953188) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463210 YP_001422395.1 CDS tgl NC_009725.1 2953328 2954071 D involved in assembly of spore coat proteins such as GerQ by catalyzing epsilon-(gamma-glutamyl)lysine cross links; transglutaminase 2953328..2954071 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463211 YP_001422396.1 CDS RBAM_028340 NC_009725.1 2954089 2954340 R hypothetical protein complement(2954089..2954340) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461592 YP_001422397.1 CDS yrpB NC_009725.1 2954366 2955397 R 2-nitropropane dioxygenase YrpB; hypothetical protein complement(2954366..2955397) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461593 YP_001422398.1 CDS yugU NC_009725.1 2955390 2955812 R conserved hypothetical protein YugU; hypothetical protein complement(2955390..2955812) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461594 YP_001422399.1 CDS yugT NC_009725.1 2955934 2957592 R glycosyl hydrolase family protein YugT; hypothetical protein complement(2955934..2957592) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461595 YP_001422400.1 CDS yugS NC_009725.1 2957682 2958971 R conserved hypothetical protein YugS; hypothetical protein complement(2957682..2958971) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461596 YP_001422401.1 CDS yugP NC_009725.1 2959014 2959691 R conserved hypothetical protein YugP; hypothetical protein complement(2959014..2959691) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461597 YP_001422402.1 CDS yugO NC_009725.1 2960385 2961371 D conserved hypothetical protein YugO; hypothetical protein 2960385..2961371 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461598 YP_001422403.1 CDS yugN NC_009725.1 2961368 2961772 R hypothetical protein YugN; hypothetical protein complement(2961368..2961772) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460450 YP_001422404.1 CDS yugM NC_009725.1 2961795 2962193 R hypothetical protein YugM; hypothetical protein complement(2961795..2962193) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460451 YP_001422405.1 CDS pgi NC_009725.1 2962215 2963567 R functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase complement(2962215..2963567) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460452 YP_001422406.1 CDS RBAM_028440 NC_009725.1 2963965 2964531 D hypothetical protein 2963965..2964531 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460453 YP_001422407.1 CDS RBAM_028450 NC_009725.1 2964656 2965300 D hypothetical protein 2964656..2965300 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460454 YP_001422408.1 CDS yugK NC_009725.1 2965597 2966769 R NADH-dependent butanol dehydrogenase YugK; hypothetical protein complement(2965597..2966769) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460455 YP_001422409.1 CDS yugJ NC_009725.1 2966856 2968019 R NADH-dependent butanol dehydrogenase YugJ; hypothetical protein complement(2966856..2968019) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460456 YP_001422410.1 CDS yuzA NC_009725.1 2968250 2968486 D conserved hypothetical protein YuzA; hypothetical protein 2968250..2968486 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459623 YP_001422411.1 CDS yugI NC_009725.1 2968534 2968926 R induced by heat shock, salt stress, oxidative stress, glucose limitation and oxygen limitation; general stress protein 13 complement(2968534..2968926) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459624 YP_001422412.1 CDS alaT NC_009725.1 2969123 2970259 R alanine transaminase AlaT; hypothetical protein complement(2969123..2970259) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459625 YP_001422413.1 CDS alaR NC_009725.1 2970293 2970793 R transcriptional regulator (Lrp/AsnC family) AlaR; AlaR complement(2970293..2970793) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459626 YP_001422414.1 CDS yugF NC_009725.1 2970946 2971767 D conserved hypothetical protein YugF; hypothetical protein 2970946..2971767 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459627 YP_001422415.1 CDS yugE NC_009725.1 2971792 2972061 R hypothetical protein YugE; hypothetical protein complement(2971792..2972061) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459628 YP_001422416.1 CDS patB NC_009725.1 2972139 2973302 D aminotransferase PatB; hypothetical protein 2972139..2973302 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459629 YP_001422417.1 CDS kinB NC_009725.1 2973425 2974708 D sporulation-specific ATP-dependent protein kinase KinB; KinB 2973425..2974708 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462837 YP_001422418.1 CDS kapB NC_009725.1 2974756 2975142 D kinase-associated lipoprotein B precursor KapB; KapB 2974756..2975142 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462838 YP_001422419.1 CDS kapD NC_009725.1 2975167 2975784 R inhibitor of the KinA pathway of sporulation; sporulation inhibitor KapD complement(2975167..2975784) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462839 YP_001422420.1 CDS yuxJ NC_009725.1 2976041 2977180 D conserved hypothetical protein YuxJ; hypothetical protein 2976041..2977180 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462840 YP_001422421.1 CDS pbpD NC_009725.1 2977270 2979144 D penicillin-binding protein IV PbpD; PbpD 2977270..2979144 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462841 YP_001422422.1 CDS yuxK NC_009725.1 2979166 2979579 D conserved hypothetical protein YuxK; hypothetical protein 2979166..2979579 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462842 YP_001422423.1 CDS yufK NC_009725.1 2979594 2980151 R hypothetical protein YufK; hypothetical protein complement(2979594..2980151) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462843 YP_001422424.1 CDS yufL NC_009725.1 2980326 2981927 D sensor histidine kinase; C4-dicarboxylate-sensing histidine kinase; part of two-component regulatory system with DcuR; regulates anaerobic fumarate respiration; sensory histidine kinase DcuS 2980326..2981927 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461200 YP_001422425.1 CDS yufM NC_009725.1 2981920 2982627 D two-component response regulator; COG4565, CitB like RR; hypothetical protein 2981920..2982627 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461201 YP_001422426.1 CDS yufN NC_009725.1 2983029 2984102 D hypothetical lipoprotein YufN; hypothetical protein 2983029..2984102 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461202 YP_001422427.1 CDS yufO NC_009725.1 2984244 2985776 D ABC transport system, ATPase component YufO; hypothetical protein 2984244..2985776 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461203 YP_001422428.1 CDS yufP NC_009725.1 2985769 2986815 D ABC transporter permease YufP; hypothetical protein 2985769..2986815 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461204 YP_001422429.1 CDS yufQ NC_009725.1 2986816 2987775 D ABC transporter permease YufQ; hypothetical protein 2986816..2987775 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461205 YP_001422430.1 CDS mrpA NC_009725.1 2988281 2990683 D subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit A 2988281..2990683 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461206 YP_001422431.1 CDS mrpB NC_009725.1 2990680 2991111 D subunit B of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in the case of S. meliloti it was proved to be involved specifically with K+ transport; monovalent cation/H+ antiporter subunit B 2990680..2991111 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459575 YP_001422432.1 CDS mrpC NC_009725.1 2991111 2991452 D subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit C 2991111..2991452 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459576 YP_001422433.1 CDS mrpD NC_009725.1 2991436 2992926 D subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; monovalent cation/H+ antiporter subunit D 2991436..2992926 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459577 YP_001422434.1 CDS mrpE NC_009725.1 2992932 2993408 D subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit E 2992932..2993408 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459578 YP_001422435.1 CDS mrpF NC_009725.1 2993408 2993692 D subunit F of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit F 2993408..2993692 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459579 YP_001422436.1 CDS mrpG NC_009725.1 2993676 2994050 D subunit G of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; monovalent cation/H+ antiporter subunit G 2993676..2994050 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459580 YP_001422437.1 CDS yuxO NC_009725.1 2994090 2994473 R conserved hypothetical protein YuxO; hypothetical protein complement(2994090..2994473) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459581 YP_001422438.1 CDS comA NC_009725.1 2994495 2995139 R two component response regulator; COG2197, CitB like RR containing a CheY-like receiver domain and a HTH DNA-binding domain; positive regulation of late competence genes and surfactin production; ComA complement(2994495..2995139) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462124 YP_001422439.1 CDS comP NC_009725.1 2995220 2997520 R sensor histidine kinase; COG4585, competence regulatory protein; polytopic membrane protein activated by comX pheromone, and donates a phosphate to ComA; ComP complement(2995220..2997520) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462125 YP_001422440.1 CDS comX NC_009725.1 2997534 2997707 R competence pheromone precursor ComX; ComX complement(2997534..2997707) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462126 YP_001422441.1 CDS comQ NC_009725.1 2997676 2998536 R transcriptional regulator of late competence operon (comG) and surfactin expression ComQ; ComQ complement(2997676..2998536) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462127 YP_001422442.1 CDS degQ NC_009725.1 2998744 2998884 R degradation enzyme regulation protein DegQ; hypothetical protein complement(2998744..2998884) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462128 YP_001422443.1 CDS yuzC NC_009725.1 2999349 2999690 D hypothetical protein YuzC; hypothetical protein 2999349..2999690 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462129 YP_001422444.1 CDS yuxH NC_009725.1 2999697 3000920 R conserved hypothetical protein YuxH; hypothetical protein complement(2999697..3000920) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462130 YP_001422445.1 CDS yueK NC_009725.1 3001050 3002513 R catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase complement(3001050..3002513) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462404 YP_001422446.1 CDS yueJ NC_009725.1 3002534 3003085 R conserved hypothetical protein YueJ; hypothetical protein complement(3002534..3003085) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462405 YP_001422447.1 CDS yueI NC_009725.1 3003182 3003580 R conserved hypothetical protein YueI; hypothetical protein complement(3003182..3003580) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462406 YP_001422448.1 CDS yueH NC_009725.1 3003646 3003894 R hypothetical protein YueH; hypothetical protein complement(3003646..3003894) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462407 YP_001422449.1 CDS yueG NC_009725.1 3003967 3004188 R hypothetical protein YueG; hypothetical protein complement(3003967..3004188) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462408 YP_001422450.1 CDS yueF NC_009725.1 3004250 3005602 R conserved hypothetical protein YueF; hypothetical protein complement(3004250..3005602) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462409 YP_001422451.1 CDS yueE NC_009725.1 3005867 3006397 R conserved hypothetical protein YueE; hypothetical protein complement(3005867..3006397) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462410 YP_001422452.1 CDS yueD NC_009725.1 3006562 3007293 R conserved hypothetical protein YueD; short chain dehydrogenase complement(3006562..3007293) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460052 YP_001422453.1 CDS yueC NC_009725.1 3007354 3007827 R hypothetical protein YueC; hypothetical protein complement(3007354..3007827) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460053 YP_001422454.1 CDS yueB NC_009725.1 3007835 3010960 R bacteriophage SPP1 adsorption protein YueB; hypothetical protein complement(3007835..3010960) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460054 YP_001422455.1 CDS yukA NC_009725.1 3010957 3015432 R conserved hypothetical protein YukA; hypothetical protein complement(3010957..3015432) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460055 YP_001422456.1 CDS yukC NC_009725.1 3015487 3016773 R conserved hypothetical protein YukC; hypothetical protein complement(3015487..3016773) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460056 YP_001422457.1 CDS yukD NC_009725.1 3016788 3017033 R conserved hypothetical protein YukD; hypothetical protein complement(3016788..3017033) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460057 YP_001422458.1 CDS yukE NC_009725.1 3017103 3017396 R conserved hypothetical protein YukE; hypothetical protein complement(3017103..3017396) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460058 YP_001422459.1 CDS yukF NC_009725.1 3017712 3018941 D conserved hypothetical protein YukF; hypothetical protein 3017712..3018941 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460801 YP_001422460.1 CDS ald NC_009725.1 3019045 3020175 D alanine dehydrogenase Ald; hypothetical protein 3019045..3020175 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460802 YP_001422461.1 CDS yukJ NC_009725.1 3020294 3020971 D conserved hypothetical protein YukJ; hypothetical protein 3020294..3020971 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460803 YP_001422462.1 CDS RBAM_029000 NC_009725.1 3021016 3021231 R hypothetical protein complement(3021016..3021231) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460804 YP_001422463.1 CDS dhbF NC_009725.1 3021250 3028377 R siderophore 2,3-dihydroxybenzoate/bacillibactin synthesis; dimodular nonribosomal peptide synthetase; DhbF complement(3021250..3028377) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460805 YP_001422464.1 CDS dhbB NC_009725.1 3028392 3029318 R siderophore 2,3-dihydroxybenzoate/bacillibactin synthesis; cd01013; isochorismatase; DhbB complement(3028392..3029318) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460806 YP_001422465.1 CDS dhbE NC_009725.1 3029336 3030961 R siderophore 2,3-dihydroxybenzoate/bacillibactin synthesis; COG1021, EntE, 2,3-dihydroxybenzoate-AMP ligase; DhbE complement(3029336..3030961) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460807 YP_001422466.1 CDS dhbC NC_009725.1 3030980 3032176 R siderophore 2,3 dihydroxybenzoate/bacillibactin synthesis; synthesizes isochorismate from chorismate as part of the biosynthesis of the siderophore 2,3-dihydroxybenzoate; can also be used in menaquinone synthesis; isochorismate synthase DhbC complement(3030980..3032176) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461229 YP_001422467.1 CDS dhbA NC_009725.1 3032200 3032970 R siderophore 2,3 dihydroxybenzoate/bacillibactin synthesis; catalyzes the formation of 2,3-dihydroxybenzoate from 2,3-dihydro-2,3-dihydroxybenzoate; involved in the biosynthesis of siderophores, enterobactin, bacillibactin or vibriobactin; 2,3-dihydroxybenzoate-2,3-dehydrogenase complement(3032200..3032970) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461230 YP_001422468.1 CDS yuiI NC_009725.1 3033121 3033990 R conserved hypothetical protein YuiI; hypothetical protein complement(3033121..3033990) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461231 YP_001422469.1 CDS yuiH NC_009725.1 3034166 3034762 R sulfite oxidase YuiH; hypothetical protein complement(3034166..3034762) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461232 YP_001422470.1 CDS yuiG NC_009725.1 3034862 3035455 D conserved hypothetical protein YuiG; hypothetical protein 3034862..3035455 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461233 YP_001422471.1 CDS yuiF NC_009725.1 3035502 3036830 R conserved hypothetical protein YuiF; hypothetical protein complement(3035502..3036830) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461234 YP_001422472.1 CDS yuiE NC_009725.1 3036963 3038453 R catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase complement(3036963..3038453) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461235 YP_001422473.1 CDS yuiD NC_009725.1 3038601 3039077 D conserved hypothetical protein YuiD; hypothetical protein 3038601..3039077 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460756 YP_001422474.1 CDS yuiC NC_009725.1 3039107 3039748 R conserved hypothetical protein YuiC; hypothetical protein complement(3039107..3039748) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460757 YP_001422475.1 CDS yuiB NC_009725.1 3039849 3040175 R hypothetical protein YuiB; hypothetical protein complement(3039849..3040175) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460758 YP_001422476.1 CDS yuiA NC_009725.1 3040238 3040363 R hypothetical protein YuiA; hypothetical protein complement(3040238..3040363) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460759 YP_001422477.1 CDS yumB NC_009725.1 3040537 3041757 R NADH2 dehydrogenase YumB; hypothetical protein complement(3040537..3041757) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460760 YP_001422478.1 CDS yumC NC_009725.1 3042069 3043064 D conserved hypothetical protein YumC; hypothetical protein 3042069..3043064 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460761 YP_001422479.1 CDS yuzG NC_009725.1 3043105 3043248 R hypothetical protein YuzG; hypothetical protein complement(3043105..3043248) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460762 YP_001422480.1 CDS guaC NC_009725.1 3043465 3044445 D GMP reductase GuaC; guanosine 5'-monophosphate oxidoreductase 3043465..3044445 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460081 YP_001422481.1 CDS RBAM_029190 NC_009725.1 3044506 3044727 R hypothetical protein complement(3044506..3044727) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460082 YP_001422482.1 CDS RBAM_029200 NC_009725.1 3044744 3045193 R hypothetical protein complement(3044744..3045193) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460083 YP_001422483.1 CDS RBAM_029210 NC_009725.1 3045268 3045972 R ABC-transporter ATP-binding protein complement(3045268..3045972) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460084 YP_001422484.1 CDS RBAM_029220 NC_009725.1 3045965 3047620 R hypothetical protein complement(3045965..3047620) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460085 YP_001422485.1 CDS RBAM_029230 NC_009725.1 3047703 3048041 R hypothetical protein complement(3047703..3048041) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460086 YP_001422486.1 CDS RBAM_029240 NC_009725.1 3048106 3048678 R hypothetical protein complement(3048106..3048678) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460087 YP_001422487.1 CDS yjcK NC_009725.1 3048937 3049476 R conserved hypothetical protein YjcK; hypothetical protein complement(3048937..3049476) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461193 YP_001422488.1 CDS dltE NC_009725.1 3049853 3050614 D lipoteichoic acid biosynthesis protein DltE; DltE 3049853..3050614 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461194 YP_001422489.1 CDS yutM NC_009725.1 3050757 3051119 R conserved hypothetical protein YutM; hypothetical protein complement(3050757..3051119) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461195 YP_001422490.1 CDS dapF NC_009725.1 3051196 3052050 R involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase complement(3051196..3052050) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461196 YP_001422491.1 CDS yutK NC_009725.1 3052174 3053391 R Na+/nucleoside co-transporter YutK; hypothetical protein complement(3052174..3053391) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461197 YP_001422492.1 CDS yuzB NC_009725.1 3053526 3053762 R hypothetical protein YuzB; hypothetical protein complement(3053526..3053762) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461198 YP_001422493.1 CDS yutJ NC_009725.1 3054029 3055096 D NADH dehydrogenase YutJ; hypothetical protein 3054029..3055096 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461199 YP_001422494.1 CDS yuzD NC_009725.1 3055134 3055460 R conserved hypothetical protein YuzD; hypothetical protein complement(3055134..3055460) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463040 YP_001422495.1 CDS yutI NC_009725.1 3055615 3055875 D conserved hypothetical protein YutI; hypothetical protein 3055615..3055875 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463041 YP_001422496.1 CDS yuxL NC_009725.1 3055916 3057892 R peptidase YuxL; hypothetical protein complement(3055916..3057892) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463042 YP_001422497.1 CDS thrB NC_009725.1 3057995 3058924 R catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase complement(3057995..3058924) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463043 YP_001422498.1 CDS thrC NC_009725.1 3058921 3059979 R catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase complement(3058921..3059979) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463044 YP_001422499.1 CDS hom NC_009725.1 3059979 3061280 R catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase complement(3059979..3061280) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463045 YP_001422500.1 CDS yutH NC_009725.1 3061482 3062495 R hypothetical protein YutH; hypothetical protein complement(3061482..3062495) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463046 YP_001422501.1 CDS yutG NC_009725.1 3062653 3063153 D conserved hypothetical protein YutG; hypothetical protein 3062653..3063153 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462323 YP_001422502.1 CDS yutF NC_009725.1 3063181 3063951 R conserved hypothetical protein YutF; hypothetical protein complement(3063181..3063951) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462324 YP_001422503.1 CDS yutE NC_009725.1 3063985 3064419 R conserved hypothetical protein YutE; hypothetical protein complement(3063985..3064419) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462325 YP_001422504.1 CDS yutD NC_009725.1 3064445 3064753 R hypothetical protein YutD; hypothetical protein complement(3064445..3064753) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462326 YP_001422505.1 CDS lipA NC_009725.1 3064938 3065834 R catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase complement(3064938..3065834) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462327 YP_001422506.1 CDS yunA NC_009725.1 3066037 3067014 D conserved hypothetical protein YunA; hypothetical protein 3066037..3067014 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462328 YP_001422507.1 CDS yunB NC_009725.1 3067052 3067810 R conserved hypothetical protein YunB; hypothetical protein complement(3067052..3067810) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462329 YP_001422508.1 CDS yunD NC_009725.1 3067937 3069331 R conserved hypothetical protein YunD; hypothetical protein complement(3067937..3069331) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462687 YP_001422509.1 CDS yunE NC_009725.1 3069349 3070170 R conserved hypothetical protein YunE; hypothetical protein complement(3069349..3070170) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462688 YP_001422510.1 CDS yunF NC_009725.1 3070190 3071041 R conserved hypothetical protein YunF; hypothetical protein complement(3070190..3071041) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462689 YP_001422511.1 CDS yunG NC_009725.1 3071068 3071421 R conserved hypothetical protein YunG; hypothetical protein complement(3071068..3071421) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462690 YP_001422512.1 CDS pucH NC_009725.1 3071495 3072859 R Plays a crucial role on both purine and pyrimidine metabolism; allantoinase complement(3071495..3072859) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462691 YP_001422513.1 CDS pucR NC_009725.1 3073039 3074634 D purine catabolism regulatory protein PucR; PucR 3073039..3074634 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462692 YP_001422514.1 CDS RBAM_029520 NC_009725.1 3074825 3074980 R hypothetical protein complement(3074825..3074980) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462693 YP_001422515.1 CDS RBAM_029530 NC_009725.1 3075047 3075199 R hypothetical protein complement(3075047..3075199) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460045 YP_001422516.1 CDS RBAM_029540 NC_009725.1 3075392 3075571 D hypothetical protein 3075392..3075571 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460046 YP_001422517.1 CDS RBAM_029550 NC_009725.1 3075623 3076078 R hypothetical protein complement(3075623..3076078) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460047 YP_001422518.1 CDS RBAM_029560 NC_009725.1 3076388 3076549 D hypothetical protein 3076388..3076549 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460048 YP_001422519.1 CDS RBAM_029570 NC_009725.1 3076595 3077791 R multidrug resistance protein complement(3076595..3077791) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460049 YP_001422520.1 CDS pucG NC_009725.1 3077913 3079166 R purine catabolism protein PucG; PucG complement(3077913..3079166) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460050 YP_001422521.1 CDS pucF NC_009725.1 3079185 3080426 R allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase complement(3079185..3080426) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460051 YP_001422522.1 CDS bsn NC_009725.1 3080626 3081495 D extracellular ribonuclease precursor Bsn; Bsn 3080626..3081495 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462263 YP_001422523.1 CDS yurJ NC_009725.1 3081545 3082651 R COG3839; multiple sugar ABC transporter (ATP-binding protein); hypothetical protein complement(3081545..3082651) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462264 YP_001422524.1 CDS yurK NC_009725.1 3082807 3083535 D may act as a transcriptional regulator of a fructoselysine-induced operon containing the yhfM, yhfN, yhfO, yhfP, yhfQ, and yhfR genes; DNA-binding transcriptional regulator FrlR 3082807..3083535 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462265 YP_001422525.1 CDS yurL NC_009725.1 3083560 3084414 R cd01940; sugar kinase, fructose-lysine kinase like; possibly involved in opine biosynthesis; hypothetical protein complement(3083560..3084414) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462266 YP_001422526.1 CDS yurM NC_009725.1 3084428 3085312 R UgpE; sugar ABC transporter; inner membrane subunit; hypothetical protein complement(3084428..3085312) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462267 YP_001422527.1 CDS yurN NC_009725.1 3085316 3086206 R sugar ABC transporter, inner membrane subunit; hypothetical protein complement(3085316..3086206) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462268 YP_001422528.1 CDS yurO NC_009725.1 3086231 3087517 R ABC sugar transporter, periplasmic component; extracellular solute binding protein; hypothetical protein complement(3086231..3087517) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462269 YP_001422529.1 CDS yurP NC_009725.1 3087570 3088556 R glutamine-fructose-6-phosphate transaminase/ predicted phosphosugar isomerase; opine catabolism; hypothetical protein complement(3087570..3088556) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462589 YP_001422530.1 CDS RBAM_029680 NC_009725.1 3088753 3089679 D HTH transcription regulator 3088753..3089679 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462590 YP_001422531.1 CDS ybgB NC_009725.1 3090139 3090411 D hypothetical protein YbgB; hypothetical protein 3090139..3090411 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462591 YP_001422532.1 CDS yurQ NC_009725.1 3090450 3090824 R conserved hypothetical protein YurQ; hypothetical protein complement(3090450..3090824) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462592 YP_001422533.1 CDS yurR NC_009725.1 3090890 3092005 R COG0665; glycine/D-amino acid oxidases (deaminating); possibly involved in opine biosynthesis; hypothetical protein complement(3090890..3092005) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462593 YP_001422534.1 CDS RBAM_029720 NC_009725.1 3092043 3092762 R COG2226; possible methyltransferase in volved in opine biosynthesis; hypothetical protein complement(3092043..3092762) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462594 YP_001422535.1 CDS yncE NC_009725.1 3092822 3093283 D hypothetical protein YncE; hypothetical protein 3092822..3093283 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462595 YP_001422536.1 CDS csn NC_009725.1 3093420 3094256 D chitosanase; downregulated by plant exudate; hypothetical protein 3093420..3094256 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459757 YP_001422537.1 CDS yurU NC_009725.1 3094291 3095688 R conserved hypothetical protein YurU; hypothetical protein complement(3094291..3095688) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459758 YP_001422538.1 CDS yurV NC_009725.1 3095708 3096151 R iron-sulfur cofactor synthesis protein nifU homolog YurV; hypothetical protein complement(3095708..3096151) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459759 YP_001422539.1 CDS csd NC_009725.1 3096141 3097361 R cysteine desulfurase Csd; hypothetical protein complement(3096141..3097361) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459760 YP_001422540.1 CDS yurX NC_009725.1 3097361 3098674 R conserved hypothetical protein YurX; hypothetical protein complement(3097361..3098674) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459761 YP_001422541.1 CDS yurY NC_009725.1 3098692 3099477 R ABC transporter (ATP-binding protein) YurY; hypothetical protein complement(3098692..3099477) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459762 YP_001422542.1 CDS yurZ NC_009725.1 3099999 3100370 R conserved hypothetical protein YurZ; hypothetical protein complement(3099999..3100370) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459763 YP_001422543.1 CDS yusA NC_009725.1 3100470 3101285 R conserved hypothetical protein YusA; hypothetical protein complement(3100470..3101285) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461326 YP_001422544.1 CDS yusB NC_009725.1 3101299 3101967 R ABC transporter (permease) YusB; hypothetical protein complement(3101299..3101967) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461327 YP_001422545.1 CDS yusC NC_009725.1 3101960 3102985 R ABC transporter (ATP-binding protein) YusC; hypothetical protein complement(3101960..3102985) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461328 YP_001422546.1 CDS yusD NC_009725.1 3103308 3103658 R hypothetical protein YusD; hypothetical protein complement(3103308..3103658) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461329 YP_001422547.1 CDS yusE NC_009725.1 3103755 3104075 R conserved hypothetical protein YusE; hypothetical protein complement(3103755..3104075) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461330 YP_001422548.1 CDS yusF NC_009725.1 3104078 3104509 R conserved hypothetical protein YusF; hypothetical protein complement(3104078..3104509) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461331 YP_001422549.1 CDS yusG NC_009725.1 3104513 3104749 R hypothetical protein YusG; hypothetical protein complement(3104513..3104749) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461332 YP_001422550.1 CDS gcvH NC_009725.1 3104804 3105187 R part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H complement(3104804..3105187) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462968 YP_001422551.1 CDS yusI NC_009725.1 3105247 3105603 R conserved hypothetical protein YusI; hypothetical protein complement(3105247..3105603) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462969 YP_001422552.1 CDS yusJ NC_009725.1 3105717 3107501 R Acyl-CoA dehydrogenase YusJ; hypothetical protein complement(3105717..3107501) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462970 YP_001422553.1 CDS yusK NC_009725.1 3107520 3108695 R Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase complement(3107520..3108695) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462971 YP_001422554.1 CDS yusL NC_009725.1 3108706 3111075 R 3-hydroxyacyl-CoA dehydrogenase YusL; hypothetical protein complement(3108706..3111075) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462972 YP_001422555.1 CDS RBAM_029930 NC_009725.1 3111266 3111406 D hypothetical protein 3111266..3111406 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462973 YP_001422556.1 CDS yusM NC_009725.1 3111436 3112344 R proline dehydrogenase YusM; hypothetical protein complement(3111436..3112344) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462974 YP_001422557.1 CDS RBAM_029950 NC_009725.1 3112434 3112691 D hypothetical protein 3112434..3112691 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461253 YP_001422558.1 CDS yusN NC_009725.1 3112703 3113035 D hypothetical protein YusN; hypothetical protein 3112703..3113035 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461254 YP_001422559.1 CDS yusO NC_009725.1 3113174 3113665 D transcriptional regulator, MarR family YusO; hypothetical protein 3113174..3113665 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461255 YP_001422560.1 CDS yusP NC_009725.1 3113655 3115250 D multidrug-efflux transporter YusP; hypothetical protein 3113655..3115250 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461256 YP_001422561.1 CDS yusQ NC_009725.1 3115285 3115668 R conserved hypothetical protein YusQ; hypothetical protein complement(3115285..3115668) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461257 YP_001422562.1 CDS yusR NC_009725.1 3115684 3116424 R conserved hypothetical protein YusR; hypothetical protein complement(3115684..3116424) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461258 YP_001422563.1 CDS yusT NC_009725.1 3116557 3117432 D HTH-type transcriptional regulator YusT; hypothetical protein 3116557..3117432 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461259 YP_001422564.1 CDS RBAM_030020 NC_009725.1 3117928 3118815 R LysR family transcriptional regulator complement(3117928..3118815) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461236 YP_001422565.1 CDS RBAM_030030 NC_009725.1 3118936 3119682 D converts acetoacetate to acetone and carbon dioxide; acetoacetate decarboxylase 3118936..3119682 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461237 YP_001422566.1 CDS RBAM_030040 NC_009725.1 3119696 3120736 D hypothetical protein 3119696..3120736 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461238 YP_001422567.1 CDS yusU NC_009725.1 3120929 3121174 R hypothetical protein YusU; hypothetical protein complement(3120929..3121174) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461239 YP_001422568.1 CDS yusV NC_009725.1 3121199 3122023 R iron(III) ABC transport ATPase component; hypothetical protein complement(3121199..3122023) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461240 YP_001422569.1 CDS yusW NC_009725.1 3122179 3122616 R hypothetical protein YusW; hypothetical protein complement(3122179..3122616) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461241 YP_001422570.1 CDS yusX NC_009725.1 3122735 3124516 R oligoendopeptidase YusX; hypothetical protein complement(3122735..3124516) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461242 YP_001422571.1 CDS yusZ NC_009725.1 3124647 3125489 D oxidoreductase YusZ; short chain dehydrogenase 3124647..3125489 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461156 YP_001422572.1 CDS mrgA NC_009725.1 3125573 3126043 D metalloregulation DNA-binding stress protein MrgA; MrgA 3125573..3126043 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461157 YP_001422573.1 CDS yvtA NC_009725.1 3126090 3127451 R serine protease YvtA; hypothetical protein complement(3126090..3127451) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461158 YP_001422574.1 CDS cssR NC_009725.1 3127728 3128405 D two-component reponse regulator; COG0745, OmpR like RR consisting of a CheY-like receiver domain and a winged helix DNA-binding domain; required to control the cellular response to secretion stress; hypothetical protein 3127728..3128405 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461159 YP_001422575.1 CDS cssS NC_009725.1 3128402 3129757 D two-component sensor histidine kinase; COG0642, BaeS like HK; required to control the cellular response to secretion stress; hypothetical protein 3128402..3129757 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461160 YP_001422576.1 CDS yirB NC_009725.1 3129784 3129948 R hypothetical protein YirB; hypothetical protein complement(3129784..3129948) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461161 YP_001422577.1 CDS yuxN NC_009725.1 3130127 3131002 D HTH-type transcriptional regulator YuxN; hypothetical protein 3130127..3131002 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461162 YP_001422578.1 CDS fumC NC_009725.1 3131039 3132427 R class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase complement(3131039..3132427) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460350 YP_001422579.1 CDS RBAM_030170 NC_009725.1 3132495 3132680 R hypothetical protein complement(3132495..3132680) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460351 YP_001422580.1 CDS gerAA NC_009725.1 3132797 3134239 D spore germination protein A1 (GerAA); GerAA 3132797..3134239 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460352 YP_001422581.1 CDS gerAB NC_009725.1 3134214 3135314 D spore germination protein A2 (GerAB); GerAB 3134214..3135314 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460353 YP_001422582.1 CDS gerAC NC_009725.1 3135311 3136423 D spore germination protein A3 (GerAC); GerAC 3135311..3136423 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460354 YP_001422583.1 CDS yvqC NC_009725.1 3136465 3137097 R two-component response regulator; COG2197, CitB like RR containing a CheY-like receiver domain and a HTH DNA-binding domain [signal transduction two component system]; hypothetical protein complement(3136465..3137097) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460355 YP_001422584.1 CDS yvqE NC_009725.1 3137075 3138157 R two-component protein histidine kinase; COG4585; signal transduction two component system; hypothetical protein complement(3137075..3138157) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460356 YP_001422585.1 CDS yvqF NC_009725.1 3138154 3138885 R conserved hypothetical protein YvqF; hypothetical protein complement(3138154..3138885) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462106 YP_001422586.1 CDS yvqG NC_009725.1 3138912 3139781 R hypothetical protein YvqG; hypothetical protein complement(3138912..3139781) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462107 YP_001422587.1 CDS yvqH NC_009725.1 3139887 3140564 R conserved hypothetical protein YvqH; hypothetical protein complement(3139887..3140564) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462108 YP_001422588.1 CDS yvqI NC_009725.1 3140578 3140958 R hypothetical protein YvqI; hypothetical protein complement(3140578..3140958) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462109 YP_001422589.1 CDS yvqJ NC_009725.1 3141125 3142393 R conserved hypothetical protein YvqJ; hypothetical protein complement(3141125..3142393) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462110 YP_001422590.1 CDS yvqK NC_009725.1 3142558 3143163 R conserved hypothetical protein YvqK; hypothetical protein complement(3142558..3143163) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462111 YP_001422591.1 CDS yvrA NC_009725.1 3143124 3144350 R ABC transport system ATP-binding protein YvrA; hypothetical protein complement(3143124..3144350) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462112 YP_001422592.1 CDS yvrB NC_009725.1 3144347 3145393 R iron permease YvrB; hypothetical protein complement(3144347..3145393) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461515 YP_001422593.1 CDS yvrC NC_009725.1 3145356 3146300 R iron-binding protein; hypothetical protein complement(3145356..3146300) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461516 YP_001422594.1 CDS yvrD NC_009725.1 3146488 3147279 D 3-oxoacyl-[acyl-carrier-protein] reductase YvrD; hypothetical protein 3146488..3147279 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461517 YP_001422595.1 CDS yvrE NC_009725.1 3147331 3148209 R conserved hypothetical protein YvrE; hypothetical protein complement(3147331..3148209) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461518 YP_001422596.1 CDS yvrG1 NC_009725.1 3148273 3150015 R two-component sensor histidine kinase; COG0642, signal transduction; hypothetical protein complement(3148273..3150015) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461519 YP_001422597.1 CDS yvrH1 NC_009725.1 3150012 3150731 R two-component response regulator; COG0745; OmpR like family; RR containing a CheY-like receiver domain and a winged-helix DNA binding domain; C-terminus similar YvrH; hypothetical protein complement(3150012..3150731) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461520 YP_001422598.1 CDS yvrH2 NC_009725.1 3150904 3151140 R hypothetical protein YvrH2; hypothetical protein complement(3150904..3151140) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461521 YP_001422599.1 CDS yvrI NC_009725.1 3151137 3151715 R conserved hypothetical protein YvrI; hypothetical protein complement(3151137..3151715) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460555 YP_001422600.1 CDS RBAM_030380 NC_009725.1 3151916 3152071 D hypothetical protein 3151916..3152071 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460556 YP_001422601.1 CDS oxdC NC_009725.1 3152189 3153349 D oxalate decarboxylase OxdC; OxdC 3152189..3153349 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460557 YP_001422602.1 CDS yvrL NC_009725.1 3153419 3153841 D hypothetical protein YvrL; hypothetical protein 3153419..3153841 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460558 YP_001422603.1 CDS fhuC NC_009725.1 3153880 3154683 R ferrichrome ABC transporter (ATP-binding protein) FhuC; FhuC complement(3153880..3154683) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460559 YP_001422604.1 CDS fhuG NC_009725.1 3154702 3155712 R ferrichrome ABC transporter (permease) FhuG; FhuG complement(3154702..3155712) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460560 YP_001422605.1 CDS fhuB NC_009725.1 3155712 3156779 R ferrichrome ABC transporter (permease) FhuB; FhuB complement(3155712..3156779) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460561 YP_001422606.1 CDS fhuD NC_009725.1 3156997 3157935 D ferrichrome ABC transporter (ferrichrome binding protein) FhuD; FhuD 3156997..3157935 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461266 YP_001422607.1 CDS yvsH NC_009725.1 3158093 3159505 R conserved hypothetical protein YvsH; hypothetical protein complement(3158093..3159505) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461267 YP_001422608.1 CDS sspJ NC_009725.1 3159918 3160058 R small acid-soluble spore protein SspJ; SspJ complement(3159918..3160058) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461268 YP_001422609.1 CDS yvsG NC_009725.1 3160242 3160724 D conserved hypothetical protein YvsG; hypothetical protein 3160242..3160724 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461269 YP_001422610.1 CDS yvgJ NC_009725.1 3160766 3162622 D conserved hypothetical protein YvgJ; hypothetical protein 3160766..3162622 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461270 YP_001422611.1 CDS yvgK NC_009725.1 3162653 3163579 R molybdenum-binding protein YvgK; hypothetical protein complement(3162653..3163579) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461271 YP_001422612.1 CDS yvgL NC_009725.1 3163697 3164494 D molybdate-binding protein YvgL; hypothetical protein 3163697..3164494 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461272 YP_001422613.1 CDS yvgM NC_009725.1 3164598 3165158 D molybdenum transport permease YvgM; hypothetical protein 3164598..3165158 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460114 YP_001422614.1 CDS RBAM_030520 NC_009725.1 3165253 3165900 D COG2197, CitB like RR containing a CheY-like receiver domain and an HTH-binding domain; two-component response regulator 3165253..3165900 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460115 YP_001422615.1 CDS RBAM_030530 NC_009725.1 3165897 3167009 D COG4585, two component signal transduction mechanism; two-component sensor histidine kinase 3165897..3167009 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460116 YP_001422616.1 CDS RBAM_030540 NC_009725.1 3167129 3168064 D multidrug ABC transporter, ATPase component 3167129..3168064 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460117 YP_001422617.1 CDS RBAM_030550 NC_009725.1 3168088 3169182 D multidrug ABC transporter, permease 3168088..3169182 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460118 YP_001422618.1 CDS RBAM_030560 NC_009725.1 3169184 3170329 D multidrug ABC transporter, permease 3169184..3170329 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460119 YP_001422619.1 CDS yvgN NC_009725.1 3170363 3171193 R dehydrogenase YvgN; hypothetical protein complement(3170363..3171193) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460120 YP_001422620.1 CDS yvgO NC_009725.1 3171415 3171900 D stress response protein precursor YvgO; hypothetical protein 3171415..3171900 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460769 YP_001422621.1 CDS yvgP NC_009725.1 3171940 3173955 R conserved hypothetical protein YvgP; hypothetical protein complement(3171940..3173955) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460770 YP_001422622.1 CDS yvgQ NC_009725.1 3174304 3176019 R hemoprotein; NADPH dependent; with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide; sulfite reductase subunit beta complement(3174304..3176019) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460771 YP_001422623.1 CDS yvgR NC_009725.1 3176047 3177855 R sulfite reductase (NADPH2) flavoprotein YvgR; hypothetical protein complement(3176047..3177855) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460772 YP_001422624.1 CDS yvgS NC_009725.1 3178030 3180345 R conserved hypothetical protein YvgS; hypothetical protein complement(3178030..3180345) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460773 YP_001422625.1 CDS yvgT NC_009725.1 3180537 3181145 R conserved hypothetical protein YvgT; hypothetical protein complement(3180537..3181145) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460774 YP_001422626.1 CDS RBAM_030640 NC_009725.1 3181368 3182168 D hypothetical protein 3181368..3182168 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460775 YP_001422627.1 CDS bdbC NC_009725.1 3182202 3182621 R disulfide bond formation protein C (BdbC); BdbC complement(3182202..3182621) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460464 YP_001422628.1 CDS bdbD NC_009725.1 3182611 3183282 R disulfide bond formation protein D precursor BdbD; BdbD complement(3182611..3183282) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460465 YP_001422629.1 CDS yvgW NC_009725.1 3183400 3185511 R metal ABC-transporter, ATPase component YvgW; hypothetical protein complement(3183400..3185511) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460466 YP_001422630.1 CDS copA NC_009725.1 3185661 3188099 R copper-transporting P-type ATPase CopA; CopA complement(3185661..3188099) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460467 YP_001422631.1 CDS copZ NC_009725.1 3188174 3188395 R copper chaperone CopZ; hypothetical protein complement(3188174..3188395) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460468 YP_001422632.1 CDS yvgZ NC_009725.1 3188456 3188761 R conserved hypothetical protein YvgZ; hypothetical protein complement(3188456..3188761) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460469 YP_001422633.1 CDS yvaA NC_009725.1 3188900 3189940 D oxidoreductase YvaA; hypothetical protein 3188900..3189940 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460470 YP_001422634.1 CDS yvaB NC_009725.1 3189985 3190620 R FMN-dependent; requires NADH; catalyzes the cleavage of azo bond in aromatic azo compounds; azoreductase complement(3189985..3190620) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462856 YP_001422635.1 CDS RBAM_030730 NC_009725.1 3190975 3191826 R hypothetical protein complement(3190975..3191826) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462857 YP_001422636.1 CDS RBAM_030740 NC_009725.1 3191930 3193147 D hypothetical protein 3191930..3193147 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462858 YP_001422637.1 CDS RBAM_030750 NC_009725.1 3193147 3193563 D hypothetical protein 3193147..3193563 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462859 YP_001422638.1 CDS RBAM_030760 NC_009725.1 3193567 3194352 D hypothetical protein 3193567..3194352 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462860 YP_001422639.1 CDS ytnJ NC_009725.1 3194554 3195882 R nitrilotriacetate monooxygenase component A (YtnJ); hypothetical protein complement(3194554..3195882) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462861 YP_001422640.1 CDS ytnI NC_009725.1 3195879 3196166 R conserved hypothetical protein YtnI; hypothetical protein complement(3195879..3196166) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462862 YP_001422641.1 CDS ytmO NC_009725.1 3196178 3197185 R conserved hypothetical protein YtmO; hypothetical protein complement(3196178..3197185) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461163 YP_001422642.1 CDS ytmN NC_009725.1 3197182 3197961 R amino-acid ABC transporter ATP-binding protein;possibly involved in opine transport; hypothetical protein complement(3197182..3197961) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461164 YP_001422643.1 CDS ytmM NC_009725.1 3197958 3198665 R amino-acid ABC transporter permease protein; possibly involved in octopin transport; hypothetical protein complement(3197958..3198665) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461165 YP_001422644.1 CDS ytmL NC_009725.1 3198681 3199403 R amino acid ABC transporter (permease) homolog; possibly involved in octopine transport; hypothetical protein complement(3198681..3199403) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461166 YP_001422645.1 CDS ytmK NC_009725.1 3199426 3200238 R amino-acid ABC transporter (periplasmic binding protein); possibly involved in opine transport; hypothetical protein complement(3199426..3200238) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461167 YP_001422646.1 CDS ytmJ NC_009725.1 3200264 3200980 R amino acid ABC transporter (periplasmic binding protein); possibly involved in opine transport; hypothetical protein complement(3200264..3200980) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461168 YP_001422647.1 CDS ytmI NC_009725.1 3201073 3201612 R conserved hypothetical protein YtmI; hypothetical protein complement(3201073..3201612) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461169 YP_001422648.1 CDS ytlI NC_009725.1 3201740 3202645 D transcription regulator LysR family YtlI; hypothetical protein 3201740..3202645 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460244 YP_001422649.1 CDS yvaG NC_009725.1 3202697 3203494 R conservative hypothetical protein YvaG; hypothetical protein complement(3202697..3203494) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460245 YP_001422650.1 CDS yrdF NC_009725.1 3203606 3203911 R ribonuclease inhibitor YrdF; hypothetical protein complement(3203606..3203911) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460246 YP_001422651.1 CDS smpB NC_009725.1 3204517 3204987 R binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein complement(3204517..3204987) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460247 YP_001422652.1 CDS rnr NC_009725.1 3205127 3207460 R ribonuclease R (3'-5'exoribonuclease) Rnr; ribonuclease R complement(3205127..3207460) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460248 YP_001422653.1 CDS yvaK NC_009725.1 3207479 3208219 R carboxylesterase YvaK; hypothetical protein complement(3207479..3208219) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460249 YP_001422654.1 CDS secG NC_009725.1 3208338 3208568 R preprotein translocase subunit SecG complement(3208338..3208568) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460250 YP_001422655.1 CDS yvzC NC_009725.1 3208692 3208922 R conserved hypothetical protein YvzC; hypothetical protein complement(3208692..3208922) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462994 YP_001422656.1 CDS yvaN NC_009725.1 3209073 3209483 D conserved hypothetical protein YvaN; hypothetical protein 3209073..3209483 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462995 YP_001422657.1 CDS yvaO NC_009725.1 3209508 3209939 D conserved hypothetical protein YvaO; hypothetical protein 3209508..3209939 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462996 YP_001422658.1 CDS yvaP NC_009725.1 3210021 3210338 D conserved hypothetical protein YvaP; hypothetical protein 3210021..3210338 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462997 YP_001422659.1 CDS spaK NC_009725.1 3210423 3211826 R subtilin biosynthesis sensor histidine kinase; smart00387; involved in the regulation of biosynthesis of lantibiotic subtilin; SpaK complement(3210423..3211826) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462998 YP_001422660.1 CDS spaR NC_009725.1 3211817 3212479 R two-component response regulator; COG0745, OmpR-like RR consisting of a CheY-like receiver domain and a winged helix-DNA-binding domain; involved in regulation of synthesis of lantibiotic subtilin; SpaR complement(3211817..3212479) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462999 YP_001422661.1 CDS spaG NC_009725.1 3212501 3213271 R lantibiotic ABC transporter permease SpaG; SpaG complement(3212501..3213271) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463000 YP_001422662.1 CDS spaE NC_009725.1 3213268 3214002 R lantibiotic ABC transporter permease SpaE; SpaE complement(3213268..3214002) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462726 YP_001422663.1 CDS spaF NC_009725.1 3213999 3214712 R lantibiotic transporter (ATP-binding protein) SpaF; SpaF complement(3213999..3214712) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462727 YP_001422664.1 CDS opuBD NC_009725.1 3214823 3215500 R choline transport system permease protein OpuBD; OpuBD complement(3214823..3215500) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462728 YP_001422665.1 CDS opuBC NC_009725.1 3215519 3216436 R choline ABC transporter (choline-binding protein) OpuBC; OpuBC complement(3215519..3216436) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462729 YP_001422666.1 CDS opuBB NC_009725.1 3216451 3217104 R choline ABC transporter (membrane protein) OpuBB; OpuBB complement(3216451..3217104) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462730 YP_001422667.1 CDS opuBA NC_009725.1 3217121 3218266 R choline ABC transporter (ATP-binding protein) OpuBA; opuBA complement(3217121..3218266) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462731 YP_001422668.1 CDS yvaV NC_009725.1 3218552 3219085 D conserved hypothetical protein YvaV; hypothetical protein 3218552..3219085 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462732 YP_001422669.1 CDS opuCD NC_009725.1 3219121 3219795 R glycine betaine/carnitine/choline ABC transporter (permease protein) OpuCD; binding-protein-dependent transport system inner membrane protein OpuCD complement(3219121..3219795) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462021 YP_001422670.1 CDS opuCC NC_009725.1 3219813 3220730 R glycine betaine/carnitine/choline ABC transporter (osmoprotectant-binding protein) OpuCC; periplasmic transport protein OpuCC complement(3219813..3220730) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462022 YP_001422671.1 CDS opuCB NC_009725.1 3220744 3221397 R glycine betaine/carnitine/choline ABC transporter (permease protein) OpuCB; OpuCB complement(3220744..3221397) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462023 YP_001422672.1 CDS opuCA NC_009725.1 3221418 3222557 R glycine betaine/carnitine/choline ABC transporter (ATP-binding protein) OpuCA; opuCA complement(3221418..3222557) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462024 YP_001422673.1 CDS yvbF NC_009725.1 3222818 3223375 D conserved hypothetical protein YvbF; hypothetical protein 3222818..3223375 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462025 YP_001422674.1 CDS yvbG NC_009725.1 3223396 3224028 R conserved hypothetical protein YvbG; hypothetical protein complement(3223396..3224028) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462026 YP_001422675.1 CDS yvbI NC_009725.1 3224467 3225177 D hypothetical protein YvbI; hypothetical protein 3224467..3225177 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462027 YP_001422676.1 CDS yvbJ NC_009725.1 3225218 3227008 R conserved hypothetical protein YvbJ; hypothetical protein complement(3225218..3227008) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462981 YP_001422677.1 CDS yvbK NC_009725.1 3227140 3227601 D conserved hypothetical protein YvbK; hypothetical protein 3227140..3227601 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462982 YP_001422678.1 CDS RBAM_031160 NC_009725.1 3227645 3228853 R probably involved in polysaccharide biosynthesis and elicitation of plant basal defence; hypothetical protein complement(3227645..3228853) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462983 YP_001422679.1 CDS RBAM_031170 NC_009725.1 3228855 3229775 R probably involved in polysaccharide biosynthesis and elicitation of plant basal defence; hypothetical protein complement(3228855..3229775) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462984 YP_001422680.1 CDS RBAM_031180 NC_009725.1 3229783 3230463 R probably involved in polysaccharide biosynthesis and elicitation of plant basal defence; hypothetical protein complement(3229783..3230463) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462985 YP_001422681.1 CDS RBAM_031190 NC_009725.1 3230423 3231181 R probably involved in polysaccharide biosynthesis and elicitation of plant basal defence; hypothetical protein complement(3230423..3231181) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462986 YP_001422682.1 CDS RBAM_031200 NC_009725.1 3231154 3231936 R probably involved in polysaccharide biosynthesis and elicitation of plant basal defence; hypothetical protein complement(3231154..3231936) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462987 YP_001422683.1 CDS RBAM_031210 NC_009725.1 3232047 3233303 R probably involved in polysaccharide biosynthesis and elicitation of plant basal defence; hypothetical protein complement(3232047..3233303) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462316 YP_001422684.1 CDS RBAM_031220 NC_009725.1 3233269 3234198 R probably involved in polysaccharide biosynthesis and elicitation of plant basal defence; hypothetical protein complement(3233269..3234198) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462317 YP_001422685.1 CDS spsC1 NC_009725.1 3234195 3235325 R spore coat polysaccharide biosynthesis protein; probably involved in polysaccharide biosynthesis and elicitation of plant basal defence; SpsC1 complement(3234195..3235325) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462318 YP_001422686.1 CDS RBAM_031240 NC_009725.1 3235374 3236708 R probably involved in polysaccharide biosynthesis and elicitation of plant basal defence; hypothetical protein complement(3235374..3236708) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462319 YP_001422687.1 CDS ywaD NC_009725.1 3236974 3238278 R peptidase; hypothetical protein complement(3236974..3238278) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462320 YP_001422688.1 CDS eno NC_009725.1 3238423 3239715 R enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase complement(3238423..3239715) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462321 YP_001422689.1 CDS pgm2 NC_009725.1 3239743 3241278 R catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase complement(3239743..3241278) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462322 YP_001422690.1 CDS tpiA NC_009725.1 3241271 3242032 R Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase complement(3241271..3242032) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463075 YP_001422691.1 CDS pgk NC_009725.1 3242058 3243242 R Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase complement(3242058..3243242) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463076 YP_001422692.1 CDS gapA NC_009725.1 3243564 3244571 R glyceraldehyde-3-phosphate dehydrogenase GapA; hypothetical protein complement(3243564..3244571) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463077 YP_001422693.1 CDS cggR NC_009725.1 3244605 3245639 R central glycolytic genes regulator CggR; CggR complement(3244605..3245639) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463078 YP_001422694.1 CDS araE NC_009725.1 3245904 3247298 R arabinose-proton symporter AraE; AraE family aromatic acid exporter complement(3245904..3247298) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463079 YP_001422695.1 CDS araR NC_009725.1 3247555 3248643 D transcription repressor of arabinose operon AraR; AraR 3247555..3248643 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463080 YP_001422696.1 CDS yvbT NC_009725.1 3248679 3249686 R conserved hypothetical protein YvbT; hypothetical protein complement(3248679..3249686) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463081 YP_001422697.1 CDS yvbU NC_009725.1 3250403 3251281 R conserved hypothetical protein YvbU; hypothetical protein complement(3250403..3251281) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459882 YP_001422698.1 CDS yvbV NC_009725.1 3251379 3252296 D conserved hypothetical protein YvbV; hypothetical protein 3251379..3252296 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459883 YP_001422699.1 CDS yvbW NC_009725.1 3252881 3253672 R amino acid permease YvbW; hypothetical protein complement(3252881..3253672) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459884 YP_001422700.1 CDS RBAM_031380 NC_009725.1 3254657 3255964 D hypothetical protein 3254657..3255964 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459885 YP_001422701.1 CDS RBAM_031390 NC_009725.1 3255994 3256968 R hypothetical protein complement(3255994..3256968) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459886 YP_001422702.1 CDS RBAM_031400 NC_009725.1 3257037 3257705 R hypothetical protein complement(3257037..3257705) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459887 YP_001422703.1 CDS RBAM_031410 NC_009725.1 3257702 3258589 R hypothetical protein complement(3257702..3258589) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459888 YP_001422704.1 CDS RBAM_031420 NC_009725.1 3259089 3259946 D RpiR family transcriptional regulator 3259089..3259946 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459869 YP_001422705.1 CDS gntK NC_009725.1 3260119 3261663 D gluconate kinase GntK; GntK 3260119..3261663 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459870 YP_001422706.1 CDS gntP NC_009725.1 3261690 3263018 D gluconate permease GntP; GntP 3261690..3263018 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459871 YP_001422707.1 CDS yvbY NC_009725.1 3263054 3263779 R conserved hypothetical protein YvbY; hypothetical protein complement(3263054..3263779) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459872 YP_001422708.1 CDS yvfW NC_009725.1 3263776 3265200 R conserved hypothetical protein YvfW; hypothetical protein complement(3263776..3265200) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459873 YP_001422709.1 CDS yvfV NC_009725.1 3265234 3265950 R glycolate oxidase YvfV; hypothetical protein complement(3265234..3265950) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459874 YP_001422710.1 CDS RBAM_031480 NC_009725.1 3266132 3267322 R hypothetical protein complement(3266132..3267322) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459875 YP_001422711.1 CDS yvfI NC_009725.1 3267353 3268072 R transcriptional regulator YvfI; hypothetical protein complement(3267353..3268072) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461862 YP_001422712.1 CDS yvfH NC_009725.1 3268278 3269954 D L-lactate permease YvfH; hypothetical protein 3268278..3269954 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461863 YP_001422713.1 CDS sigL NC_009725.1 3269992 3271305 R RNA polymerase sigma-54 factor SigL; SigL complement(3269992..3271305) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461864 YP_001422714.1 CDS yvfG NC_009725.1 3271380 3271598 D hypothetical protein YvfG; hypothetical protein 3271380..3271598 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461865 YP_001422715.1 CDS epsO NC_009725.1 3271612 3272577 R exopolysaccharide polymerization protein; hypothetical protein complement(3271612..3272577) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461866 YP_001422716.1 CDS epsN NC_009725.1 3272556 3273728 R conserved hypothetical protein; hypothetical protein complement(3272556..3273728) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461867 YP_001422717.1 CDS epsM NC_009725.1 3273733 3274380 R conserved hypothetical protein; hypothetical protein complement(3273733..3274380) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461868 YP_001422718.1 CDS epsL NC_009725.1 3274377 3274985 R conserved hypothetical protein; hypothetical protein complement(3274377..3274985) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461298 YP_001422719.1 CDS epsK NC_009725.1 3274982 3276499 R hypothetical protein complement(3274982..3276499) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461299 YP_001422720.1 CDS epsJ NC_009725.1 3276496 3277530 R conserved hypothetical protein; hypothetical protein complement(3276496..3277530) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461300 YP_001422721.1 CDS epsI NC_009725.1 3277527 3278603 R conserved hypothetical protein; hypothetical protein complement(3277527..3278603) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461301 YP_001422722.1 CDS epsH NC_009725.1 3278608 3279645 R spore coat polysaccharide biosynthesis protein; hypothetical protein complement(3278608..3279645) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461302 YP_001422723.1 CDS epsG NC_009725.1 3279664 3280767 R protein for capsular polysaccharide biosynthesis; hypothetical protein complement(3279664..3280767) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461303 YP_001422724.1 CDS epsF NC_009725.1 3280771 3281907 R capsular polysaccharide biosynthesis protein; hypothetical protein complement(3280771..3281907) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461304 YP_001422725.1 CDS epsE NC_009725.1 3281900 3282742 R exopolysaccharide biosynthesis protein; hypothetical protein complement(3281900..3282742) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462423 YP_001422726.1 CDS epsD NC_009725.1 3282739 3283878 R capsular polysaccharide biosynthesis protein; hypothetical protein complement(3282739..3283878) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462424 YP_001422727.1 CDS epsC NC_009725.1 3283894 3285687 R capsular polysaccharide biosynthesis protein; hypothetical protein complement(3283894..3285687) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462425 YP_001422728.1 CDS epsB NC_009725.1 3285933 3286613 R capsular polysaccharide biosynthesis protein; hypothetical protein complement(3285933..3286613) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462426 YP_001422729.1 CDS epsA NC_009725.1 3286619 3287326 R capsular polysaccharide biosynthesis protein; hypothetical protein complement(3286619..3287326) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462427 YP_001422730.1 CDS slr NC_009725.1 3287571 3288026 D transcriptional regulator Slr; Slr 3287571..3288026 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462428 YP_001422731.1 CDS pnbA NC_009725.1 3288107 3289555 D Para-nitrobenzyl esterase (intracellular esterase B) PnbA; PnbA 3288107..3289555 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462429 YP_001422732.1 CDS ywjB NC_009725.1 3289594 3290124 R conserved hypothetical protein YwjB; hypothetical protein complement(3289594..3290124) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460730 YP_001422733.1 CDS yyaS NC_009725.1 3290205 3290834 R conserved hypothetical protein YyaS; hypothetical protein complement(3290205..3290834) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460731 YP_001422734.1 CDS paiA NC_009725.1 3290962 3291486 D protease synthase and sporulation negative regulator PaiA; PaiA 3290962..3291486 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460732 YP_001422735.1 CDS padC NC_009725.1 3291528 3292016 R phenolic acid decarboxylase PadC; PadC complement(3291528..3292016) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460733 YP_001422736.1 CDS yveG NC_009725.1 3292038 3292196 R hypothetical protein YveG; hypothetical protein complement(3292038..3292196) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460734 YP_001422737.1 CDS RBAM_031750 NC_009725.1 3292448 3292786 R hypothetical protein complement(3292448..3292786) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460735 YP_001422738.1 CDS RBAM_031760 NC_009725.1 3292865 3293179 R hypothetical protein complement(3292865..3293179) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460736 YP_001422739.1 CDS RBAM_031770 NC_009725.1 3293235 3293642 D hypothetical protein 3293235..3293642 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462277 YP_001422740.1 CDS RBAM_031780 NC_009725.1 3294030 3294344 R hypothetical protein complement(3294030..3294344) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462278 YP_001422741.1 CDS RBAM_031790 NC_009725.1 3294396 3295823 D hypothetical protein 3294396..3295823 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462279 YP_001422742.1 CDS RBAM_031800 NC_009725.1 3295840 3296151 D hypothetical protein 3295840..3296151 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462280 YP_001422743.1 CDS RBAM_031820 NC_009725.1 3296493 3297962 R hypothetical protein complement(3296493..3297962) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462282 YP_001422744.1 CDS lacY NC_009725.1 3297977 3299209 R lactose/proton symporter; mediates lactose/proton symport through the membrane by utilizing the proton gradient to drive transport of galactosides; member of major facilitator superfamily; functions as a monomer with 12 transmembrane segments; galactoside permease complement(3297977..3299209) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460184 YP_001422745.1 CDS RBAM_031840 NC_009725.1 3299600 3300574 D transcriptional regulator 3299600..3300574 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460185 YP_001422746.1 CDS clpP NC_009725.1 3300821 3301417 D hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 3300821..3301417 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460186 YP_001422747.1 CDS yraN NC_009725.1 3301461 3302321 R LysR-family transcription regulator YraN; hypothetical protein complement(3301461..3302321) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460187 YP_001422748.1 CDS yraM NC_009725.1 3302495 3303625 D conserved hypothetical protein YraM; hypothetical protein 3302495..3303625 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460188 YP_001422749.1 CDS RBAM_031880 NC_009725.1 3303669 3305045 D transport protein 3303669..3305045 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460189 YP_001422750.1 CDS yvdD NC_009725.1 3305289 3305864 R conserved hypothetical protein YvdD; hypothetical protein complement(3305289..3305864) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460190 YP_001422751.1 CDS yvdC NC_009725.1 3305980 3306300 D conserved hypothetical protein YvdC; hypothetical protein 3305980..3306300 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462464 YP_001422752.1 CDS yvdB NC_009725.1 3306346 3307935 R transporter YvdB; hypothetical protein complement(3306346..3307935) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462465 YP_001422753.1 CDS yvdA NC_009725.1 3307938 3308519 R carbonic anhydrase YvdA; hypothetical protein complement(3307938..3308519) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462466 YP_001422754.1 CDS yvcT NC_009725.1 3308920 3309885 D 2-ketogluconate reductase YvcT; hypothetical protein 3308920..3309885 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462467 YP_001422755.1 CDS RBAM_031940 NC_009725.1 3310031 3310480 D ribonuclease precursor (Barnase) 3310031..3310480 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462468 YP_001422756.1 CDS yvcN NC_009725.1 3310541 3311287 R conserved hypothetical protein YvcN; hypothetical protein complement(3310541..3311287) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462469 YP_001422757.1 CDS crh NC_009725.1 3311312 3311569 R catabolite repression HPr-like protein Crh; phosphocarrier protein Chr complement(3311312..3311569) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462470 YP_001422758.1 CDS yvcL NC_009725.1 3311593 3312543 R conserved hypothetical protein YvcL; hypothetical protein complement(3311593..3312543) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459532 YP_001422759.1 CDS yvcK NC_009725.1 3312570 3313523 R conserved hypothetical protein YvcK; hypothetical protein complement(3312570..3313523) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459533 YP_001422760.1 CDS yvcJ NC_009725.1 3313520 3314407 R conserved hypothetical protein YvcJ; hypothetical protein complement(3313520..3314407) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459534 YP_001422761.1 CDS yvcI NC_009725.1 3314433 3314900 R conserved hypothetical protein YvcI; hypothetical protein complement(3314433..3314900) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459535 YP_001422762.1 CDS trxB NC_009725.1 3315174 3316127 R thioredoxin reductase TrxB; hypothetical protein complement(3315174..3316127) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459536 YP_001422763.1 CDS cwlO NC_009725.1 3316331 3317743 R conserved hypothetical protein CwlO; hypothetical protein complement(3316331..3317743) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459537 YP_001422764.1 CDS yvcD NC_009725.1 3318140 3319594 R conserved hypothetical protein YvcD; hypothetical protein complement(3318140..3319594) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459538 YP_001422765.1 CDS RBAM_032040 NC_009725.1 3319710 3320771 R two-component sensor histidine kinase complement(3319710..3320771) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460830 YP_001422766.1 CDS RBAM_032050 NC_009725.1 3320768 3321445 R two-component response regulator complement(3320768..3321445) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460831 YP_001422767.1 CDS yvcC NC_009725.1 3321640 3323409 R ABC transporter (ATP-binding protein) YvcC; hypothetical protein complement(3321640..3323409) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460832 YP_001422768.1 CDS hisI NC_009725.1 3323621 3324241 R catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein complement(3323621..3324241) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460833 YP_001422769.1 CDS hisF NC_009725.1 3324238 3324996 R catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF complement(3324238..3324996) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460834 YP_001422770.1 CDS hisA NC_009725.1 3324993 3325730 R catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase complement(3324993..3325730) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460835 YP_001422771.1 CDS hisH NC_009725.1 3325727 3326365 R with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH complement(3325727..3326365) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460836 YP_001422772.1 CDS hisB NC_009725.1 3326366 3326950 R catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase complement(3326366..3326950) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461046 YP_001422773.1 CDS hisD NC_009725.1 3326916 3328229 R catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase complement(3326916..3328229) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461047 YP_001422774.1 CDS hisG NC_009725.1 3328226 3328867 R short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ; ATP phosphoribosyltransferase complement(3328226..3328867) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461048 YP_001422775.1 CDS hisZ NC_009725.1 3328860 3330032 R May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine; ATP phosphoribosyltransferase complement(3328860..3330032) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461049 YP_001422776.1 CDS yvpB NC_009725.1 3330273 3330998 D conserved hypothetical protein YvpB; hypothetical protein 3330273..3330998 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461050 YP_001422777.1 CDS yvoF NC_009725.1 3331019 3331534 R acetyltransferase YvoF; hypothetical protein complement(3331019..3331534) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461051 YP_001422778.1 CDS hprP NC_009725.1 3331538 3332188 R hydrolyzes pyrophosphate formed during serine-46-phosphorylated HPr dephosphorylation; pyrophosphatase PpaX complement(3331538..3332188) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461052 YP_001422779.1 CDS lgt NC_009725.1 3332214 3333029 R transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase complement(3332214..3333029) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461986 YP_001422780.1 CDS hprK NC_009725.1 3333044 3333976 R catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system; HPr kinase/phosphorylase complement(3333044..3333976) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461987 YP_001422781.1 CDS nagA NC_009725.1 3334146 3335336 D N-acetylglucosamine-6-phosphate deacetylase NagA; hypothetical protein 3334146..3335336 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461988 YP_001422782.1 CDS nagB NC_009725.1 3335333 3336058 D N-acetylglucosamine-6-phosphate isomerase NagB; NagB 3335333..3336058 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461989 YP_001422783.1 CDS yvoA NC_009725.1 3336072 3336803 D transcription regulator YvoA; hypothetical protein 3336072..3336803 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461990 YP_001422784.1 CDS yxaF NC_009725.1 3336948 3337523 R HTH-type transcriptional regulator YxaF; hypothetical protein complement(3336948..3337523) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461991 YP_001422785.1 CDS yvnB NC_009725.1 3337690 3341559 R conserved hypothetical protein YvnB; hypothetical protein complement(3337690..3341559) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461992 YP_001422786.1 CDS yvlD NC_009725.1 3341653 3342012 R conserved hypothetical protein YvlD; hypothetical protein complement(3341653..3342012) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459798 YP_001422787.1 CDS yvlC NC_009725.1 3342013 3342207 R conserved hypothetical protein YvlC; hypothetical protein complement(3342013..3342207) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459799 YP_001422788.1 CDS yvlB NC_009725.1 3342212 3343309 R conserved hypothetical protein YvlB; hypothetical protein complement(3342212..3343309) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459800 YP_001422789.1 CDS yvlA NC_009725.1 3343334 3343660 R hypothetical protein YvlA; hypothetical protein complement(3343334..3343660) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459801 YP_001422790.1 CDS yvkN NC_009725.1 3343858 3344118 D hypothetical protein YvkN; hypothetical protein 3343858..3344118 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459802 YP_001422791.1 CDS uvrA NC_009725.1 3344144 3347017 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A complement(3344144..3347017) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459803 YP_001422792.1 CDS uvrB NC_009725.1 3347025 3349010 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B complement(3347025..3349010) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459804 YP_001422793.1 CDS csbA NC_009725.1 3349186 3349422 R membrane protein CsbA; hypothetical protein complement(3349186..3349422) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462719 YP_001422794.1 CDS yvkC NC_009725.1 3349724 3352225 D conserved hypothetical protein YvkC; hypothetical protein 3349724..3352225 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462720 YP_001422795.1 CDS yvkB NC_009725.1 3352294 3352920 D conserved hypothetical protein YvkB; hypothetical protein 3352294..3352920 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462721 YP_001422796.1 CDS yvkA NC_009725.1 3352893 3354230 D conserved hypothetical protein YvkA; hypothetical protein 3352893..3354230 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462722 YP_001422797.1 CDS yvjD NC_009725.1 3354462 3355652 R conserved hypothetical protein YvjD; hypothetical protein complement(3354462..3355652) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462723 YP_001422798.1 CDS swrA NC_009725.1 3355727 3356080 R swarming motility protein; SwrA complement(3355727..3356080) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462724 YP_001422799.1 CDS yvjB NC_009725.1 3356453 3357853 R periplasmic protease YvjB; hypothetical protein complement(3356453..3357853) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462725 YP_001422800.1 CDS ywoF NC_009725.1 3358021 3359427 D hypothetical protein YwoF; hypothetical protein 3358021..3359427 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462897 YP_001422801.1 CDS ftsX NC_009725.1 3359474 3360373 R cell-division protein FtsX; hypothetical protein complement(3359474..3360373) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462898 YP_001422802.1 CDS ftsE NC_009725.1 3360357 3361043 R cell-division ATP-binding protein FtsE; hypothetical protein complement(3360357..3361043) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462899 YP_001422803.1 CDS cccB NC_009725.1 3361262 3361603 R cytochrome c551 (CccB); CccB complement(3361262..3361603) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462900 YP_001422804.1 CDS yvjA NC_009725.1 3361639 3362487 R conserved hypothetical protein YvjA; hypothetical protein complement(3361639..3362487) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462901 YP_001422805.1 CDS prfB NC_009725.1 3362657 3363640 R peptide chain release factor II (PrfB); hypothetical protein complement(3362657..3363640) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462902 YP_001422806.1 CDS secA NC_009725.1 3363833 3366358 R functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA complement(3363833..3366358) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462903 YP_001422807.1 CDS yvyD NC_009725.1 3366525 3367091 R conserved hypothetical protein YvyD; hypothetical protein complement(3366525..3367091) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461395 YP_001422808.1 CDS RBAM_032470 NC_009725.1 3367286 3367663 R hypothetical protein complement(3367286..3367663) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461396 YP_001422809.1 CDS fliT NC_009725.1 3367673 3368017 R flagellar protein FliT; FliT complement(3367673..3368017) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461397 YP_001422810.1 CDS fliS NC_009725.1 3368017 3368418 R flagellin specific chaperone; flagellar protein FliS complement(3368017..3368418) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461398 YP_001422811.1 CDS fliD NC_009725.1 3368438 3369985 R flagellin HAP2; involved in flagellin assembly; flagellar capping protein complement(3368438..3369985) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461399 YP_001422812.1 CDS hag NC_009725.1 3370236 3371066 R flagellin; involved in elicitation of plant basal defence; upregulation by root exudate; Hag complement(3370236..3371066) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461400 YP_001422813.1 CDS csrA NC_009725.1 3371210 3371434 R affects carbohydrate metabolism; has regulatory role in many processes; carbon storage regulator complement(3371210..3371434) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461401 YP_001422814.1 CDS yviF NC_009725.1 3371428 3371859 R binds to flagellin and appears to stabilize flagellin during flagella assembly; flagellar assembly protein FliW complement(3371428..3371859) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461027 YP_001422815.1 CDS yviE NC_009725.1 3371889 3372452 R hypothetical protein YviE; hypothetical protein complement(3371889..3372452) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461028 YP_001422816.1 CDS flgL NC_009725.1 3372549 3373466 R with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgL complement(3372549..3373466) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461029 YP_001422817.1 CDS flgK NC_009725.1 3373478 3374995 R flagellin HAP1; with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgK complement(3373478..3374995) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461030 YP_001422818.1 CDS yvyG NC_009725.1 3375011 3375493 R conserved hypothetical protein YvyG; hypothetical protein complement(3375011..3375493) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461031 YP_001422819.1 CDS flgM NC_009725.1 3375508 3375774 R negative regulator of flagellin synthesis (Anti-sigma-D factor) FlgM; hypothetical protein complement(3375508..3375774) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461032 YP_001422820.1 CDS yvyF NC_009725.1 3375844 3376263 R hypothetical protein YvyF; hypothetical protein complement(3375844..3376263) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461033 YP_001422821.1 CDS comFC NC_009725.1 3376337 3377014 R competence protein FC (ComFC); hypothetical protein complement(3376337..3377014) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459656 YP_001422822.1 CDS comFB NC_009725.1 3377032 3377316 R competence protein FB (ComFB); ComFB complement(3377032..3377316) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459657 YP_001422823.1 CDS comFA NC_009725.1 3377374 3378759 R late competence protein ComFA; ComFA complement(3377374..3378759) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459658 YP_001422824.1 CDS yviA NC_009725.1 3378867 3379715 R conserved hypothetical protein YviA; hypothetical protein complement(3378867..3379715) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459659 YP_001422825.1 CDS degU NC_009725.1 3379813 3380502 R two-component response regulator DegU; DegU complement(3379813..3380502) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459660 YP_001422826.1 CDS degS NC_009725.1 3380579 3381742 R two-component sensor histidine kinase DegS; DegS complement(3380579..3381742) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459661 YP_001422827.1 CDS yvyE NC_009725.1 3381965 3382612 D conserved hypothetical protein YvyE; hypothetical protein 3381965..3382612 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459662 YP_001422828.1 CDS yvhJ NC_009725.1 3382617 3383837 D transcriptional regulator YvhJ; hypothetical protein 3382617..3383837 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460927 YP_001422829.1 CDS tagO NC_009725.1 3383936 3385012 R undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase ; probably involved in elicitation of plant basal defence; TagO complement(3383936..3385012) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460928 YP_001422830.1 CDS tuaH NC_009725.1 3385145 3386341 R teichuronic acid biosynthesis glycosyl transferase; probably involved in elicitation of plant basal defence; TuaH complement(3385145..3386341) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460929 YP_001422831.1 CDS tuaG NC_009725.1 3386361 3387119 R teichuronic acid biosynthesis glycosyl transferase; probably involved in elicitation of plant basal defence; TuaG complement(3386361..3387119) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460930 YP_001422832.1 CDS tuaF NC_009725.1 3387143 3387823 R teichuronic acid biosynthesis protein; probably involved in elicitation of plant basal defence; TuaF complement(3387143..3387823) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460931 YP_001422833.1 CDS tuaE NC_009725.1 3387820 3389307 R teichuronic acid biosynthesis protein; probably involved in elicitation of plant basal defence; TuaE complement(3387820..3389307) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460932 YP_001422834.1 CDS tuaD NC_009725.1 3389374 3390714 R UDP-glucose 6-dehydrogenase; probably involved in elicitation of plant basal defence; TuaD complement(3389374..3390714) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460933 YP_001422835.1 CDS tuaC NC_009725.1 3390719 3391915 R teichuronic acid biosynthesis glycosyl transferase; probably involved in elicitation of plant basal defence; TuaC complement(3390719..3391915) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460343 YP_001422836.1 CDS tuaB NC_009725.1 3391912 3393360 R teichuronic acid biosynthesis protein; probably involved in elicitation of plant basal defence; colanic acid exporter complement(3391912..3393360) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460344 YP_001422837.1 CDS tuaA NC_009725.1 3393397 3394038 R undecaprenyl-phosphate N-acetylgalactosaminyl 1-phosphate transferase; probably involved in elicitation of plant basal defence; TuaA complement(3393397..3394038) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460345 YP_001422838.1 CDS lytC NC_009725.1 3394273 3395763 R N-acetylmuramoyl-L-alanine amidase (major autolysin) (CWBP49); LytC complement(3394273..3395763) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460346 YP_001422839.1 CDS lytB NC_009725.1 3395785 3397905 R amidase enhancer precursor (Modifier protein of major autolysin); hypothetical protein complement(3395785..3397905) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460347 YP_001422840.1 CDS lytA NC_009725.1 3397938 3398255 R membrane bound lipoprotein; LytA complement(3397938..3398255) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460348 YP_001422841.1 CDS lytR NC_009725.1 3398436 3399353 D attenuator function for control of operon expression; membrane-bound transcriptional regulator LytR 3398436..3399353 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460349 YP_001422842.1 CDS mnaA NC_009725.1 3399385 3400524 R UDP-N-acetylglucosamine 2-epimerase (UDP-GlcNAc-2- epimerase); MnaA complement(3399385..3400524) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461962 YP_001422843.1 CDS gtaB NC_009725.1 3400753 3401637 D UTP-glucose-1-phosphate uridylyltransferase; GtaB 3400753..3401637 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461963 YP_001422844.1 CDS tagH NC_009725.1 3401677 3403221 R with TagG is involved in the export of teichoic acids; teichoic acids export protein ATP-binding subunit complement(3401677..3403221) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461964 YP_001422845.1 CDS tagG NC_009725.1 3403242 3404069 R teichoic acid translocation permease protein; hypothetical protein complement(3403242..3404069) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461965 YP_001422846.1 CDS tagF NC_009725.1 3404255 3406429 R CDP-glycerol:poly (glycerol phosphate) glycero-phosphotransferase; TagF complement(3404255..3406429) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461966 YP_001422847.1 CDS RBAM_032860 NC_009725.1 3406479 3408017 R minor teichoic acid biosynthesis protein ggaA like protein complement(3406479..3408017) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461967 YP_001422848.1 CDS tagD NC_009725.1 3408155 3408544 R glycerol-3-phosphate cytidylyltransferase; hypothetical protein complement(3408155..3408544) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461968 YP_001422849.1 CDS tagA NC_009725.1 3408900 3409670 D N-acetylmannosaminyltransferase (major teichoic acid biosynthesis protein A); TagA 3408900..3409670 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461599 YP_001422850.1 CDS tagB NC_009725.1 3409703 3410869 D CDP-glycerol:glycerophosphate glycerophospho transferase (major teichoic acid biosynthesis protein B); TagB 3409703..3410869 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461600 YP_001422851.1 CDS lytD NC_009725.1 3410931 3413576 R beta-N-acetylglucosaminidase (major autolysin) (CWBP90); LytD complement(3410931..3413576) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461601 YP_001422852.1 CDS pmi NC_009725.1 3413716 3414666 R mannose-6-phosphate isomerase; Pmi complement(3413716..3414666) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461602 YP_001422853.1 CDS gerBA NC_009725.1 3414886 3416337 D spore germination protein BA; GerBA 3414886..3416337 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461603 YP_001422854.1 CDS gerBB NC_009725.1 3416343 3417449 D spore germination protein BB; GerBB 3416343..3417449 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461604 YP_001422855.1 CDS gerBC NC_009725.1 3417446 3418576 D spore germination protein BC (GerBC); GerBC 3417446..3418576 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461605 YP_001422856.1 CDS RBAM_032950 NC_009725.1 3418580 3419992 R hypothetical protein complement(3418580..3419992) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461086 YP_001422857.1 CDS ywtG NC_009725.1 3420085 3421461 R transport protein YwtG; hypothetical protein complement(3420085..3421461) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461087 YP_001422858.1 CDS ywtF NC_009725.1 3421764 3422750 D transcriptional regulator YwtF; hypothetical protein 3421764..3422750 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461088 YP_001422859.1 CDS ywtE NC_009725.1 3422906 3423763 D conserved hypothetical protein YwtE; hypothetical protein 3422906..3423763 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461089 YP_001422860.1 CDS yttA NC_009725.1 3423866 3424600 D conserved hypothetical protein YttA; hypothetical protein 3423866..3424600 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461090 YP_001422861.1 CDS pgdS NC_009725.1 3424639 3425874 R gamma-DL-glutamyl hydrolase precursor PgdS; PgdS complement(3424639..3425874) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461091 YP_001422862.1 CDS ywtC NC_009725.1 3426025 3426186 R hypothetical protein YwtC; hypothetical protein complement(3426025..3426186) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461092 YP_001422863.1 CDS ywtB NC_009725.1 3426194 3427342 R conserved hypothetical protein YwtB; hypothetical protein complement(3426194..3427342) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460788 YP_001422864.1 CDS ywtA NC_009725.1 3427361 3427810 R poly-gamma-glutamic synthesis pgsC protein YwtA; hypothetical protein complement(3427361..3427810) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460789 YP_001422865.1 CDS ywsC NC_009725.1 3427825 3429006 R poly-gamma-glutamic synthesis pgsB protein YwsC; hypothetical protein complement(3427825..3429006) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460790 YP_001422866.1 CDS gerKA1 NC_009725.1 3429147 3429890 D spore germination protein GerKA1; GerKA1 3429147..3429890 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460791 YP_001422867.1 CDS gerKB1 NC_009725.1 3429880 3430971 D spore germination protein GerKB1; GerKB1 3429880..3430971 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460792 YP_001422868.1 CDS gerKC1 NC_009725.1 3430961 3432094 D spore germination protein GerKC1; GerKC1 3430961..3432094 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460793 YP_001422869.1 CDS rbsR NC_009725.1 3432185 3433177 D ribose operon transcriptional repressor RbsR; RbsR 3432185..3433177 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460794 YP_001422870.1 CDS rbsK NC_009725.1 3433170 3434051 D ribokinase RbsK; hypothetical protein 3433170..3434051 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462879 YP_001422871.1 CDS rbsD NC_009725.1 3434048 3434443 D cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose; RbsD is required for efficient ribose utilization in E. coli; rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source; D-ribose pyranase 3434048..3434443 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462880 YP_001422872.1 CDS rbsA NC_009725.1 3434460 3435953 D ribose ABC transporter (ATP-binding protein) RbsA; RbsA 3434460..3435953 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462881 YP_001422873.1 CDS rbsC NC_009725.1 3435943 3436914 D ribose ABC transporter (permease) RbsC; RbsC 3435943..3436914 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462882 YP_001422874.1 CDS rbsB NC_009725.1 3436928 3437845 D ribose ABC transporter (ribose-binding protein) RbsB; hypothetical protein 3436928..3437845 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462883 YP_001422875.1 CDS ywsB NC_009725.1 3437906 3438439 D conserved hypothetical protein YwsB; hypothetical protein 3437906..3438439 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462884 YP_001422876.1 CDS ywrO NC_009725.1 3438564 3439097 R NAD(P)H oxidoreductase YwrO; hypothetical protein complement(3438564..3439097) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462885 YP_001422877.1 CDS alsD NC_009725.1 3439190 3439957 R alpha-acetolactate decarboxylase; synthesis of 2,3-butanediol; plant growth promotion and elicitation of plant ISR; hypothetical protein complement(3439190..3439957) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459842 YP_001422878.1 CDS alsS NC_009725.1 3440018 3441733 R catalyzes the formation of 2-acetolactate from pyruvate in stationary phase; acetolactate synthase complement(3440018..3441733) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459843 YP_001422879.1 CDS alsR NC_009725.1 3441887 3442795 D LysR transcription regulator; synthesis of 2,3-butanediol; plant growth promotion and elicitation of plant ISR; AlsR 3441887..3442795 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459844 YP_001422880.1 CDS ywrK NC_009725.1 3442992 3444323 D transporter YwrK; hypothetical protein 3442992..3444323 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459845 YP_001422881.1 CDS ywrJ NC_009725.1 3444372 3445046 R hypothetical protein YwrJ; hypothetical protein complement(3444372..3445046) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459846 YP_001422882.1 CDS cotB NC_009725.1 3445088 3445978 R spore coat protein B (outer) (CotB); CotB complement(3445088..3445978) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459847 YP_001422883.1 CDS cotH NC_009725.1 3446101 3447195 R spore coat protein H (inner) (CotH); CotH complement(3446101..3447195) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459848 YP_001422884.1 CDS cotG NC_009725.1 3447336 3447866 D spore coat protein G (CotG); CotG 3447336..3447866 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460404 YP_001422885.1 CDS ywrF NC_009725.1 3448023 3448643 D conserved hypothetical protein YwrF; hypothetical protein 3448023..3448643 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460405 YP_001422886.1 CDS RBAM_033250 NC_009725.1 3448798 3448893 D hypothetical protein 3448798..3448893 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460406 YP_001422887.1 CDS RBAM_033260 NC_009725.1 3448929 3449099 D hypothetical protein 3448929..3449099 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460407 YP_001422888.1 CDS ywrD NC_009725.1 3449102 3450679 R gamma-glutamyltransferase YwrD; hypothetical protein complement(3449102..3450679) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460408 YP_001422889.1 CDS ywrC NC_009725.1 3450887 3451363 D transcription regulator YwrC; hypothetical protein 3450887..3451363 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460409 YP_001422890.1 CDS ywrB NC_009725.1 3451377 3451967 D chromate transporter YwrB; hypothetical protein 3451377..3451967 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460410 YP_001422891.1 CDS ywrA NC_009725.1 3451964 3452500 D chromate transporter YwrA; hypothetical protein 3451964..3452500 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461612 YP_001422892.1 CDS ywqL NC_009725.1 3452658 3453374 R endonuclease V (yYwqL; hypothetical protein complement(3452658..3453374) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461613 YP_001422893.1 CDS RBAM_033320 NC_009725.1 3453415 3453915 R hypothetical protein complement(3453415..3453915) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461614 YP_001422894.1 CDS RBAM_033330 NC_009725.1 3454253 3454543 R hypothetical protein complement(3454253..3454543) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461615 YP_001422895.1 CDS RBAM_033340 NC_009725.1 3454662 3455204 R hypothetical protein complement(3454662..3455204) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461616 YP_001422896.1 CDS RBAM_033350 NC_009725.1 3455205 3455531 R hypothetical protein complement(3455205..3455531) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461617 YP_001422897.1 CDS RBAM_033360 NC_009725.1 3455727 3456329 D hypothetical protein 3455727..3456329 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461618 YP_001422898.1 CDS RBAM_033380 NC_009725.1 3456490 3457002 R hypothetical protein complement(3456490..3457002) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460144 YP_001422899.1 CDS RBAM_033390 NC_009725.1 3457481 3457942 R hypothetical protein complement(3457481..3457942) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460145 YP_001422900.1 CDS RBAM_033400 NC_009725.1 3458223 3458528 R hypothetical protein complement(3458223..3458528) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460146 YP_001422901.1 CDS ywqJ NC_009725.1 3458545 3460293 R hypothetical protein YwqJ; hypothetical protein complement(3458545..3460293) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460147 YP_001422902.1 CDS ywqI NC_009725.1 3460313 3460573 R hypothetical protein YwqI; hypothetical protein complement(3460313..3460573) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460148 YP_001422903.1 CDS ywqH NC_009725.1 3460573 3461007 R hypothetical protein YwqH; hypothetical protein complement(3460573..3461007) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460149 YP_001422904.1 CDS ywqG NC_009725.1 3461288 3462076 R conserved hypothetical protein YwqG; hypothetical protein complement(3461288..3462076) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460150 YP_001422905.1 CDS ywqF NC_009725.1 3462140 3463465 R NDP-sugar dehydrogenase homolog YwqF; hypothetical protein complement(3462140..3463465) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461020 YP_001422906.1 CDS ywqE NC_009725.1 3463665 3464429 R tyrosine-protein phosphatase YwqE; hypothetical protein complement(3463665..3464429) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461021 YP_001422907.1 CDS ywqD NC_009725.1 3464475 3465164 R tyrosine-protein kinase YwqD; hypothetical protein complement(3464475..3465164) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461022 YP_001422908.1 CDS ywqC NC_009725.1 3465151 3465897 R conserved hypothetical protein YwqC; hypothetical protein complement(3465151..3465897) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461023 YP_001422909.1 CDS ywqB NC_009725.1 3466460 3468070 D conserved hypothetical protein YwqB; hypothetical protein 3466460..3468070 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461024 YP_001422910.1 CDS ywqA NC_009725.1 3468057 3470831 D conserved hypothetical protein YwqA; hypothetical protein 3468057..3470831 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461025 YP_001422911.1 CDS ywpJ NC_009725.1 3470944 3471801 R conserved hypothetical protein YwpJ; hypothetical protein complement(3470944..3471801) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461026 YP_001422912.1 CDS glcR NC_009725.1 3471798 3472580 R transcriptional regulator (DeoR family) GlcR; GlcR complement(3471798..3472580) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460424 YP_001422913.1 CDS ywpH NC_009725.1 3472789 3473130 R single-strand DNA-binding protein YwpH; hypothetical protein complement(3472789..3473130) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460425 YP_001422914.1 CDS ywpG NC_009725.1 3473228 3473581 R hypothetical protein YwpG; hypothetical protein complement(3473228..3473581) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460426 YP_001422915.1 CDS ywpF NC_009725.1 3473754 3474164 D hypothetical protein YwpF; hypothetical protein 3473754..3474164 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460427 YP_001422916.1 CDS mscL NC_009725.1 3474212 3474607 R homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel complement(3474212..3474607) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460428 YP_001422917.1 CDS fabZ NC_009725.1 3474663 3475088 R in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase complement(3474663..3475088) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460429 YP_001422918.1 CDS rapD NC_009725.1 3475284 3476348 D response regulator aspartate phosphatase D (RapD); RapD 3475284..3476348 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460430 YP_001422919.1 CDS flhP NC_009725.1 3476366 3477187 R flagellar hook-basal body complex protein FlhP; FlhP complement(3476366..3477187) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461665 YP_001422920.1 CDS flhO NC_009725.1 3477212 3478009 R flagellar hook-basal body complex protein FlhO; FlhO complement(3477212..3478009) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461666 YP_001422921.1 CDS mbl NC_009725.1 3478169 3479170 R mreB-like protein Mbl; rod shape-determining protein Mbl complement(3478169..3479170) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461667 YP_001422922.1 CDS spoIIID NC_009725.1 3479351 3479632 R stage III sporulation protein D (SpoIIID); SpoIIID complement(3479351..3479632) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461668 YP_001422923.1 CDS ywoH NC_009725.1 3479964 3480377 D transcriptional regulator YwoH; hypothetical protein 3479964..3480377 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461669 YP_001422924.1 CDS ywoG NC_009725.1 3480402 3481598 D transporter YwoG; hypothetical protein 3480402..3481598 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461670 YP_001422925.1 CDS ywoE NC_009725.1 3481634 3483088 R allantoin permease (Allantoin transportprotein) YwoE; hypothetical protein complement(3481634..3483088) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461671 YP_001422926.1 CDS ywoD NC_009725.1 3483253 3484617 R conserved hypothetical protein YwoD; hypothetical protein complement(3483253..3484617) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462740 YP_001422927.1 CDS ywoC NC_009725.1 3484614 3485180 R isochorismatase YwoC; hypothetical protein complement(3484614..3485180) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462741 YP_001422928.1 CDS nrgA NC_009725.1 3485433 3486644 D ammonium transporter NrgA; NrgA 3485433..3486644 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462742 YP_001422929.1 CDS nrgB NC_009725.1 3486662 3487012 D nitrogen-regulated PII-like protein NrgB; NrgB 3486662..3487012 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462743 YP_001422930.1 CDS RBAM_033700 NC_009725.1 3487064 3488218 R cell-division protein complement(3487064..3488218) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462744 YP_001422931.1 CDS ywoA NC_009725.1 3488383 3488958 D conserved hypothetical protein YwoA; hypothetical protein 3488383..3488958 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462745 YP_001422932.1 CDS ywnJ NC_009725.1 3488976 3489398 R conserved hypothetical protein YwnJ; hypothetical protein complement(3488976..3489398) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462746 YP_001422933.1 CDS spoIIQ NC_009725.1 3489490 3490359 R stage II sporulation protein Q (SpoIIQ); SpoIIQ complement(3489490..3490359) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461311 YP_001422934.1 CDS ywnH NC_009725.1 3490492 3490989 D phosphinothricin N-acetyltransferase YwnH; hypothetical protein 3490492..3490989 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461312 YP_001422935.1 CDS ywnG NC_009725.1 3490986 3491435 D hypothetical protein YwnG; hypothetical protein 3490986..3491435 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461313 YP_001422936.1 CDS ywnF NC_009725.1 3491467 3491904 R hypothetical protein YwnF; hypothetical protein complement(3491467..3491904) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461314 YP_001422937.1 CDS ywnE NC_009725.1 3492125 3493573 D conserved hypothetical protein YwnE; hypothetical protein 3492125..3493573 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461315 YP_001422938.1 CDS ywnC NC_009725.1 3493709 3494095 D hypothetical protein YwnC; hypothetical protein 3493709..3494095 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461316 YP_001422939.1 CDS xynA NC_009725.1 3494569 3495210 D endo-1,4-beta-xylanase A precursor; hypothetical protein 3494569..3495210 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461317 YP_001422940.1 CDS ywnA NC_009725.1 3495542 3495946 R conserved hypothetical protein YwnA; hypothetical protein complement(3495542..3495946) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460743 YP_001422941.1 CDS ureC NC_009725.1 3496087 3497796 R ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; urease subunit alpha complement(3496087..3497796) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460744 YP_001422942.1 CDS ureB NC_009725.1 3497793 3498167 R urease (beta subunit) UreB; UreB complement(3497793..3498167) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460745 YP_001422943.1 CDS ureA NC_009725.1 3498164 3498481 R UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter; urease subunit gamma complement(3498164..3498481) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460746 YP_001422944.1 CDS csbD NC_009725.1 3498835 3499023 R stress response protein CsbD; hypothetical protein complement(3498835..3499023) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460747 YP_001422945.1 CDS ywmF NC_009725.1 3499098 3499577 R hypothetical protein YwmF; hypothetical protein complement(3499098..3499577) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460748 YP_001422946.1 CDS rapB NC_009725.1 3499699 3500829 R aspartate phosphatase response regulator RapB; RapB complement(3499699..3500829) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460749 YP_001422947.1 CDS moaA NC_009725.1 3501020 3502045 R together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A complement(3501020..3502045) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461474 YP_001422948.1 CDS fdhD NC_009725.1 3502063 3502851 R involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth; formate dehydrogenase accessory protein complement(3502063..3502851) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461475 YP_001422949.1 CDS ywmD NC_009725.1 3503196 3503876 R conserved hypothetical protein YwmD; hypothetical protein complement(3503196..3503876) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461476 YP_001422950.1 CDS ywmC NC_009725.1 3504186 3504872 R conserved hypothetical protein YwmC; hypothetical protein complement(3504186..3504872) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461477 YP_001422951.1 CDS spoIID NC_009725.1 3505137 3506168 R stage II sporulation protein D (SpoIID); hypothetical protein complement(3505137..3506168) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461478 YP_001422952.1 CDS murAA NC_009725.1 3506368 3507678 R adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(3506368..3507678) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461479 YP_001422953.1 CDS ywmB NC_009725.1 3507712 3508452 R hypothetical protein YwmB; hypothetical protein complement(3507712..3508452) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461480 YP_001422954.1 CDS ywzB NC_009725.1 3508594 3508824 R hypothetical protein YwzB; hypothetical protein complement(3508594..3508824) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460913 YP_001422955.1 CDS ywmA NC_009725.1 3508997 3509467 D hypothetical protein YwmA; hypothetical protein 3508997..3509467 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460914 YP_001422956.1 CDS atpC NC_009725.1 3509512 3509910 R part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon complement(3509512..3509910) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460915 YP_001422957.1 CDS atpD NC_009725.1 3509934 3511355 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta complement(3509934..3511355) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460916 YP_001422958.1 CDS atpG NC_009725.1 3511381 3512244 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma complement(3511381..3512244) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460917 YP_001422959.1 CDS atpA NC_009725.1 3512320 3513828 R produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha complement(3512320..3513828) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460918 YP_001422960.1 CDS atpH NC_009725.1 3513845 3514390 R Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta complement(3513845..3514390) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460919 YP_001422961.1 CDS atpF NC_009725.1 3514387 3514899 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B complement(3514387..3514899) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462348 YP_001422962.1 CDS atpE NC_009725.1 3515042 3515254 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C complement(3515042..3515254) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462349 YP_001422963.1 CDS atpB NC_009725.1 3515300 3516034 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A complement(3515300..3516034) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462350 YP_001422964.1 CDS atpI NC_009725.1 3516042 3516425 R ATP synthase (subunit I) AtpI; AtpI complement(3516042..3516425) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462351 YP_001422965.1 CDS upp NC_009725.1 3516844 3517473 R Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase complement(3516844..3517473) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462352 YP_001422966.1 CDS glyA NC_009725.1 3517608 3518855 R catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase complement(3517608..3518855) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462353 YP_001422967.1 CDS ywlG NC_009725.1 3519003 3519545 R conserved hypothetical protein YwlG; hypothetical protein complement(3519003..3519545) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462354 YP_001422968.1 CDS ywlF NC_009725.1 3519559 3520008 R catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity; ribose-5-phosphate isomerase B complement(3519559..3520008) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460411 YP_001422969.1 CDS ywlE NC_009725.1 3520142 3520597 R low molecular weight phosphatase YwlE; hypothetical protein complement(3520142..3520597) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460412 YP_001422970.1 CDS ywlD NC_009725.1 3520671 3521228 R conserved hypothetical protein YwlD; hypothetical protein complement(3520671..3521228) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460413 YP_001422971.1 CDS ywlC NC_009725.1 3521297 3522337 R conserved hypothetical protein YwlC; hypothetical protein complement(3521297..3522337) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460414 YP_001422972.1 CDS ywlB NC_009725.1 3522494 3522937 R conserved hypothetical protein YwlB; hypothetical protein complement(3522494..3522937) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460415 YP_001422973.1 CDS spoIIR NC_009725.1 3523008 3523688 R stage II sporulation protein R (SpoIIR); SpoIIR complement(3523008..3523688) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460416 YP_001422974.1 CDS ywlA NC_009725.1 3523849 3524223 D conserved hypothetical protein YwlA; hypothetical protein 3523849..3524223 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460417 YP_001422975.1 CDS ywkF NC_009725.1 3524210 3524488 R hypothetical protein YwkF; hypothetical protein complement(3524210..3524488) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459982 YP_001422976.1 CDS ywkE NC_009725.1 3524559 3525419 R hemK protein homolog YwkE; hypothetical protein complement(3524559..3525419) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459983 YP_001422977.1 CDS prfA NC_009725.1 3525421 3526500 R recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 complement(3525421..3526500) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459984 YP_001422978.1 CDS ywkD NC_009725.1 3526603 3526986 D conserved hypothetical protein YwkD; hypothetical protein 3526603..3526986 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459985 YP_001422979.1 CDS racA NC_009725.1 3527096 3527659 D remodeling and anchoring of the chromosome protein; in Bacillus subtilis this protein functions in polar chromosome segregation during sporulation; binds inverted sequence motifs called ram along the chromosome; condenses DNA via RacA-RacA interactions; polar chromosome segregation protein 3527096..3527659 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459986 YP_001422980.1 CDS ywkB NC_009725.1 3527693 3528649 R hypothetical protein YwkB; hypothetical protein complement(3527693..3528649) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459987 YP_001422981.1 CDS ywkA NC_009725.1 3528736 3530433 R malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate; malate dehydrogenase complement(3528736..3530433) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459988 YP_001422982.1 CDS tdk NC_009725.1 3530717 3531301 R catalyzes the formation of thymidine 5'-phosphate from thymidine; thymidine kinase complement(3530717..3531301) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459669 YP_001422983.1 CDS rpmE NC_009725.1 3531386 3531586 R RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 complement(3531386..3531586) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459670 YP_001422984.1 CDS rho NC_009725.1 3531708 3532994 R An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho complement(3531708..3532994) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459671 YP_001422985.1 CDS glpX NC_009725.1 3533401 3534366 R type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II complement(3533401..3534366) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459672 YP_001422986.1 CDS murAB NC_009725.1 3534400 3535689 R adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(3534400..3535689) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459673 YP_001422987.1 CDS tal NC_009725.1 3535999 3536637 R similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity; translaldolase complement(3535999..3536637) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459674 YP_001422988.1 CDS fbaA NC_009725.1 3536756 3537613 R catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate; induced by anaerobic conditions in Bacillus subtilis; fructose-bisphosphate aldolase complement(3536756..3537613) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459675 YP_001422989.1 CDS spo0F NC_009725.1 3537789 3538163 R sporulation initiation phosphotransferase F (Spo0F); Spo0F complement(3537789..3538163) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461558 YP_001422990.1 CDS ywjG NC_009725.1 3538328 3538849 D hypothetical protein YwjG; hypothetical protein 3538328..3538849 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461559 YP_001422991.1 CDS pyrG NC_009725.1 3538897 3540504 R CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase complement(3538897..3540504) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461560 YP_001422992.1 CDS rpoE NC_009725.1 3540745 3541272 R participates in both the initiation and recycling phases of transcription; in the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; DNA-directed RNA polymerase subunit delta complement(3540745..3541272) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461561 YP_001422993.1 CDS ywjF NC_009725.1 3541500 3543608 R conserved hypothetical protein YwjF; hypothetical protein complement(3541500..3543608) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461562 YP_001422994.1 CDS ywjE NC_009725.1 3543747 3544946 D conserved hypothetical protein YwjE; hypothetical protein 3543747..3544946 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461563 YP_001422995.1 CDS uvsE NC_009725.1 3544959 3545921 D UV DNA damage endonuclease UvsE; UV damage endonuclease 3544959..3545921 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461564 YP_001422996.1 CDS ywjC NC_009725.1 3545990 3546262 D hypothetical protein YwjC; hypothetical protein 3545990..3546262 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462674 YP_001422997.1 CDS ywjA NC_009725.1 3546333 3548057 R ABC transporter ATP-binding protein YwjA; hypothetical protein complement(3546333..3548057) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462675 YP_001422998.1 CDS ywiE NC_009725.1 3548138 3549703 R cardiolipin synthetase YwiE; hypothetical protein complement(3548138..3549703) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462676 YP_001422999.1 CDS RBAM_034390 NC_009725.1 3549736 3550365 R hypothetical protein complement(3549736..3550365) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462677 YP_001423000.1 CDS narI NC_009725.1 3550505 3551176 R nitrate reductase (gamma subunit) NarI; NarI complement(3550505..3551176) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462678 YP_001423001.1 CDS narJ NC_009725.1 3551173 3551730 R nitrate reductase delta chain NarJ; NarJ complement(3551173..3551730) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462679 YP_001423002.1 CDS narH NC_009725.1 3551756 3553195 R nitrate reductase beta chain NarH; NarH complement(3551756..3553195) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462680 YP_001423003.1 CDS narG NC_009725.1 3553209 3556895 R nitrate reductase alpha chain NarG; NarG complement(3553209..3556895) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460391 YP_001423004.1 CDS arfM NC_009725.1 3557073 3557549 R transcriptional regulator ArfM; ArfM complement(3557073..3557549) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460392 YP_001423005.1 CDS ywiC NC_009725.1 3557692 3558411 D hypothetical protein YwiC; hypothetical protein 3557692..3558411 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460393 YP_001423006.1 CDS fnr NC_009725.1 3558443 3559159 R anaerobic regulatory protein Fnr; Fnr complement(3558443..3559159) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460394 YP_001423007.1 CDS narK NC_009725.1 3559257 3560447 R nitrite extrusion protein NarK; hypothetical protein complement(3559257..3560447) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460395 YP_001423008.1 CDS argS NC_009725.1 3560581 3562251 R catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase complement(3560581..3562251) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460396 YP_001423009.1 CDS ywiB NC_009725.1 3562248 3562676 R conserved hypothetical protein YwiB; hypothetical protein complement(3562248..3562676) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460397 YP_001423010.1 CDS albG NC_009725.1 3562857 3563405 D antilisterial bacteriocin subtilosin biosynthesis protein AlbG; AlbG 3562857..3563405 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462774 YP_001423011.1 CDS ywhL NC_009725.1 3563348 3564724 R conserved hypothetical protein YwhL; hypothetical protein complement(3563348..3564724) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462775 YP_001423012.1 CDS ywhK NC_009725.1 3564764 3566119 R conserved hypothetical protein YwhK; hypothetical protein complement(3564764..3566119) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462776 YP_001423013.1 CDS rapF NC_009725.1 3566350 3567495 D response regulator aspartate phosphatase RapF; RapF 3566350..3567495 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462777 YP_001423014.1 CDS phrF NC_009725.1 3567479 3567598 D phosphatase rapF inhibitor PhrF; PhrF 3567479..3567598 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462778 YP_001423015.1 CDS RBAM_034550 NC_009725.1 3567796 3567999 D transcriptional regulator 3567796..3567999 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462779 YP_001423016.1 CDS RBAM_034560 NC_009725.1 3568013 3568216 D hypothetical protein 3568013..3568216 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462780 YP_001423017.1 CDS RBAM_034570 NC_009725.1 3568251 3568436 D hypothetical protein 3568251..3568436 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462559 YP_001423018.1 CDS RBAM_034580 NC_009725.1 3568622 3568903 D hypothetical protein 3568622..3568903 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462560 YP_001423019.1 CDS RBAM_034590 NC_009725.1 3568962 3569459 D hypothetical protein 3568962..3569459 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462561 YP_001423020.1 CDS RBAM_034600 NC_009725.1 3569464 3570003 D hypothetical protein 3569464..3570003 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462562 YP_001423021.1 CDS speB NC_009725.1 3570436 3571308 R agmatinase (Agmatine ureohydrolase) (AUH) SpeB; hypothetical protein complement(3570436..3571308) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462563 YP_001423022.1 CDS speE NC_009725.1 3571367 3572197 R catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase complement(3571367..3572197) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462564 YP_001423023.1 CDS ywhE NC_009725.1 3572397 3574469 D penicillin-binding protein YwhE; hypothetical protein 3572397..3574469 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462565 YP_001423024.1 CDS RBAM_034640 NC_009725.1 3574494 3574925 R hypothetical protein complement(3574494..3574925) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463122 YP_001423025.1 CDS ywhD NC_009725.1 3575069 3575587 R hypothetical protein YwhD; hypothetical protein complement(3575069..3575587) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463123 YP_001423026.1 CDS ywhC NC_009725.1 3575600 3576259 R conserved hypothetical protein YwhC; hypothetical protein complement(3575600..3576259) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463124 YP_001423027.1 CDS ywhB NC_009725.1 3576365 3576553 D tautomerase YwhB; hypothetical protein 3576365..3576553 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463125 YP_001423028.1 CDS ywhA NC_009725.1 3576591 3577010 R transcription regulator YwhA; hypothetical protein complement(3576591..3577010) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463126 YP_001423029.1 CDS RBAM_034690 NC_009725.1 3577392 3578774 D amino acid transporter 3577392..3578774 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463127 YP_001423030.1 CDS ywgA NC_009725.1 3578839 3579336 R conserved hypothetical protein YwgA; hypothetical protein complement(3578839..3579336) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463128 YP_001423031.1 CDS ywfO NC_009725.1 3579379 3580680 R conserved hypothetical protein YwfO; hypothetical protein complement(3579379..3580680) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462910 YP_001423032.1 CDS ywzC NC_009725.1 3580840 3581064 R hypothetical protein YwzC; hypothetical protein complement(3580840..3581064) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462911 YP_001423033.1 CDS rsfA NC_009725.1 3581267 3582040 D prespore specific transcriptional regulator RsfA; RsfA 3581267..3582040 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462912 YP_001423034.1 CDS RBAM_034740 NC_009725.1 3582301 3582615 D hypothetical protein 3582301..3582615 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462913 YP_001423035.1 CDS RBAM_034750 NC_009725.1 3582616 3583170 D hypothetical protein 3582616..3583170 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462914 YP_001423036.1 CDS RBAM_034760 NC_009725.1 3583268 3584188 D ABC transporter ATP-binding protein 3583268..3584188 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462915 YP_001423037.1 CDS RBAM_034770 NC_009725.1 3584185 3585138 D hypothetical protein 3584185..3585138 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462916 YP_001423038.1 CDS RBAM_034780 NC_009725.1 3585128 3585964 R hypothetical protein complement(3585128..3585964) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461887 YP_001423039.1 CDS RBAM_034790 NC_009725.1 3585955 3586719 R hypothetical protein complement(3585955..3586719) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461888 YP_001423040.1 CDS RBAM_034800 NC_009725.1 3586721 3587680 R hypothetical protein complement(3586721..3587680) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461889 YP_001423041.1 CDS RBAM_034810 NC_009725.1 3587693 3587872 R hypothetical protein complement(3587693..3587872) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461890 YP_001423042.1 CDS ywfL NC_009725.1 3588025 3588888 R conserved hypothetical protein YwfL; hypothetical protein complement(3588025..3588888) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461891 YP_001423043.1 CDS ywfK NC_009725.1 3588935 3589834 R transcription regulator, LysR family YwfK; hypothetical protein complement(3588935..3589834) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461892 YP_001423044.1 CDS RBAM_034840 NC_009725.1 3589950 3590927 D hypothetical protein 3589950..3590927 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461893 YP_001423045.1 CDS eutD NC_009725.1 3590964 3591935 R in Salmonella this enzyme is required for ethanolamine catabolism; has higher affinity for CoA than Pta; phosphotransacetylase complement(3590964..3591935) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461900 YP_001423046.1 CDS ywfI NC_009725.1 3592197 3592961 D conserved hypothetical protein YwfI; heme peroxidase 3592197..3592961 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461901 YP_001423047.1 CDS ywfH NC_009725.1 3593081 3593860 D oxidoreductase YwfH; hypothetical protein 3593081..3593860 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461902 YP_001423048.1 CDS ywfG NC_009725.1 3593877 3595076 R produces methionine from 2-keto-4-methylthiobutyrate and glutamine in vitro; mutations do not affect methionine salvage in vivo however; transaminase complement(3593877..3595076) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461903 YP_001423049.1 CDS bacE NC_009725.1 3595089 3596270 R anticapsin/bacilysin excretion protein; BacE complement(3595089..3596270) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461904 YP_001423050.1 CDS bacD NC_009725.1 3596267 3597685 R L-amino acid ligase; COG0439; bacilysin synthesis; BacD complement(3596267..3597685) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461905 YP_001423051.1 CDS bacC NC_009725.1 3597703 3598464 R bacilysin synthesis; COG1028; bacilysin synthetase C; BacC complement(3597703..3598464) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461906 YP_001423052.1 CDS bacB NC_009725.1 3598461 3599174 R bacilysin biosynthesis; COG1917; bacilysin synthetase B; BacB complement(3598461..3599174) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461926 YP_001423053.1 CDS bacA NC_009725.1 3599161 3599784 R bacilysin biosynthesis; pfam00800; bacilysin synthetase A; hypothetical protein complement(3599161..3599784) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461927 YP_001423054.1 CDS ywfA NC_009725.1 3599936 3601174 R conserved hypothetical protein YwfA; hypothetical protein complement(3599936..3601174) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461928 YP_001423055.1 CDS RBAM_034950 NC_009725.1 3601397 3602599 D drug resistance transporter 3601397..3602599 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461929 YP_001423056.1 CDS rocC NC_009725.1 3602632 3604050 R amino acid permease RocC; RocC complement(3602632..3604050) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461930 YP_001423057.1 CDS rocB NC_009725.1 3604075 3605757 R arginine degradation protein RocB; RocB complement(3604075..3605757) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461931 YP_001423058.1 CDS rocA NC_009725.1 3605829 3607376 R catalyzes the conversion of 1-proline-5-carboxylate dehydrogenase to L-glutamate; 1-pyrroline-5-carboxylate dehydrogenase complement(3605829..3607376) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461932 YP_001423059.1 CDS rocG NC_009725.1 3607584 3608870 R NAD-specific glutamate dehydrogenase (NAD-GDH) RocG; RocG complement(3607584..3608870) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460330 YP_001423060.1 CDS RBAM_035000 NC_009725.1 3609102 3610037 R two-component sensor histidine kinase complement(3609102..3610037) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460331 YP_001423061.1 CDS RBAM_035010 NC_009725.1 3610039 3610737 R two-component response regulator complement(3610039..3610737) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460332 YP_001423062.1 CDS RBAM_035020 NC_009725.1 3610929 3611228 R hypothetical protein complement(3610929..3611228) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460333 YP_001423063.1 CDS RBAM_035030 NC_009725.1 3611307 3611795 R hypothetical protein complement(3611307..3611795) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460334 YP_001423064.1 CDS RBAM_035040 NC_009725.1 3611816 3612520 R hypothetical protein complement(3611816..3612520) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460335 YP_001423065.1 CDS RBAM_035050 NC_009725.1 3612585 3613529 R ABC transporter ATP-binding protein complement(3612585..3613529) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460336 YP_001423066.1 CDS spsL NC_009725.1 3613860 3614321 R spore coat polysaccharide synthesis protein SpsL; SpsL complement(3613860..3614321) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461497 YP_001423067.1 CDS spsK NC_009725.1 3614312 3615160 R spore coat polysaccharide synthesis protei SpsK; SpsK complement(3614312..3615160) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461498 YP_001423068.1 CDS spsJ NC_009725.1 3615181 3616128 R spore coat polysaccharide synthesis protein SpsJ; SpsJ complement(3615181..3616128) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461499 YP_001423069.1 CDS spsI NC_009725.1 3616131 3616868 R spore coat polysaccharide synthesis protein SpsI; SpsI complement(3616131..3616868) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461500 YP_001423070.1 CDS spsG NC_009725.1 3616896 3617900 R spore coat polysaccharide synthesis protein SpsG; SpsG complement(3616896..3617900) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461501 YP_001423071.1 CDS spsF NC_009725.1 3617902 3618645 R spore coat polysaccharide synthesis protein SpsF; SpsF complement(3617902..3618645) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461502 YP_001423072.1 CDS spsE NC_009725.1 3618635 3619756 R spore coat polysaccharide synthesis protein SpsE; SpsE complement(3618635..3619756) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461503 YP_001423073.1 CDS spsD NC_009725.1 3619756 3620619 R spore coat polysaccharide synthesis protein SpsD; SpsD complement(3619756..3620619) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462194 YP_001423074.1 CDS spsC NC_009725.1 3620620 3621789 R spore coat polysaccharide synthesis protein SpsC; SpsC complement(3620620..3621789) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462195 YP_001423075.1 CDS spsB NC_009725.1 3621812 3623236 R spore coat polysaccharide synthesis protein SpsB; SpsB complement(3621812..3623236) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462196 YP_001423076.1 CDS spsA NC_009725.1 3623241 3624011 R spore coat polysaccharide synthesis protein SpsA; SpsA complement(3623241..3624011) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462197 YP_001423077.1 CDS ywdL NC_009725.1 3624292 3624843 D hypothetical protein YwdL; hypothetical protein 3624292..3624843 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462198 YP_001423078.1 CDS ywdK NC_009725.1 3624890 3625261 R conserved hypothetical protein YwdK; hypothetical protein complement(3624890..3625261) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462199 YP_001423079.1 CDS ywdJ NC_009725.1 3625325 3626644 R purine permease YwdJ; hypothetical protein complement(3625325..3626644) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462200 YP_001423080.1 CDS ywdI NC_009725.1 3626663 3626989 R hypothetical protein YwdI; hypothetical protein complement(3626663..3626989) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463241 YP_001423081.1 CDS ung NC_009725.1 3627145 3627828 R Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase complement(3627145..3627828) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463242 YP_001423082.1 CDS ywdF NC_009725.1 3627843 3628649 R glycosyl transferase YwdF; hypothetical protein complement(3627843..3628649) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463243 YP_001423083.1 CDS ywdE NC_009725.1 3628734 3629261 R hypothetical protein YwdE; hypothetical protein complement(3628734..3629261) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463244 YP_001423084.1 CDS ywdD NC_009725.1 3629306 3629797 R hypothetical protein YwdD; hypothetical protein complement(3629306..3629797) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463245 YP_001423085.1 CDS RBAM_035250 NC_009725.1 3629934 3630272 R transcriptional regulator complement(3629934..3630272) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463246 YP_001423086.1 CDS thiD NC_009725.1 3630422 3631234 D catalyzes the phosphorylation of three vitamin B6 precursors, pyridoxal, pyridoxine and pyridoxamine; pyridoxal kinase 3630422..3631234 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463247 YP_001423087.1 CDS ywdA NC_009725.1 3631266 3631505 R hypothetical protein YwdA; hypothetical protein complement(3631266..3631505) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459855 YP_001423088.1 CDS sacA NC_009725.1 3631605 3633044 R sucrase-6-phosphate hydrolase (Sucrase) (Invertase) SacA; SacA complement(3631605..3633044) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459856 YP_001423089.1 CDS sacP NC_009725.1 3633041 3634423 R phosphotransferase system (PTS) sucrose-specificenzyme IIBC component SacP; SacP complement(3633041..3634423) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459857 YP_001423090.1 CDS sacT NC_009725.1 3634644 3635474 R transcriptional antiterminator SacT; SacT complement(3634644..3635474) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459858 YP_001423091.1 CDS ywcI NC_009725.1 3635498 3635812 R hypothetical protein YwcI; hypothetical protein complement(3635498..3635812) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459859 YP_001423092.1 CDS vpr NC_009725.1 3636338 3638749 D minor extracellular protease Vpr; Vpr 3636338..3638749 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459860 YP_001423093.1 CDS ywcH NC_009725.1 3638791 3639792 R conserved hypothetical protein YwcH; hypothetical protein complement(3638791..3639792) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459861 YP_001423094.1 CDS RBAM_035340 NC_009725.1 3640032 3640364 D transposase 3640032..3640364 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461421 YP_001423095.1 CDS RBAM_035350 NC_009725.1 3640370 3641182 D transposase 3640370..3641182 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461422 YP_001423096.1 CDS nfrA NC_009725.1 3641244 3641993 R FMN-containing NADPH-linked nitro/flavin reductase NfrA; NfrA complement(3641244..3641993) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461423 YP_001423097.1 CDS rodA NC_009725.1 3642096 3643283 R cell-division protein RodA; RodA complement(3642096..3643283) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461424 YP_001423098.1 CDS ysnE NC_009725.1 3643485 3643943 R IAA-acetyl-transferase; involved in Trp dependent IAA synthesis. Mutant ysnE was found impaired in IAA production and plant growth promotion; hypothetical protein complement(3643485..3643943) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461425 YP_001423099.1 CDS ywcE NC_009725.1 3644236 3644496 D hypothetical protein YwcE; hypothetical protein 3644236..3644496 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461426 YP_001423100.1 CDS qoxD NC_009725.1 3644540 3644908 R quinol oxidase subunit IV QoxD; QoxD complement(3644540..3644908) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461427 YP_001423101.1 CDS qoxC NC_009725.1 3644910 3645524 R quinol oxidase subunit III QoxC; QoxC complement(3644910..3645524) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462479 YP_001423102.1 CDS qoxB NC_009725.1 3645539 3647488 R quinol oxidase polypeptide I QoxB; QoxB complement(3645539..3647488) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462480 YP_001423103.1 CDS qoxA NC_009725.1 3647516 3648481 R quinol oxidase subunit II precursor QoxA; QoxA complement(3647516..3648481) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462481 YP_001423104.1 CDS ydaS NC_009725.1 3648984 3649229 D hypothetical protein YdaS; hypothetical protein 3648984..3649229 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462482 YP_001423105.1 CDS galT NC_009725.1 3649246 3650787 R catalyzes the formation of alpha-D-glucose 1-phosphate and UDP-galactose from UDP-glucose and alpha-D-galactose 1-phosphate in galactose metabolism; galactose-1-phosphate uridylyltransferase complement(3649246..3650787) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462483 YP_001423106.1 CDS galK NC_009725.1 3650777 3651961 R catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism; galactokinase complement(3650777..3651961) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462484 YP_001423107.1 CDS ywcD NC_009725.1 3652013 3652420 R conserved hypothetical protein YwcD; hypothetical protein complement(3652013..3652420) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462485 YP_001423108.1 CDS ywcC NC_009725.1 3652479 3653102 R conserved hypothetical protein YwcC; hypothetical protein complement(3652479..3653102) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459638 YP_001423109.1 CDS RBAM_035490 NC_009725.1 3653438 3653599 D hypothetical protein 3653438..3653599 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459639 YP_001423110.1 CDS RBAM_035500 NC_009725.1 3653816 3654496 D hypothetical protein 3653816..3654496 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459640 YP_001423111.1 CDS RBAM_035510 NC_009725.1 3654496 3655170 D hypothetical protein 3654496..3655170 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459641 YP_001423112.1 CDS ywbO NC_009725.1 3655191 3655793 R conserved hypothetical protein YwbO; hypothetical protein complement(3655191..3655793) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459642 YP_001423113.1 CDS ywbN NC_009725.1 3655879 3657135 R conserved hypothetical protein YwbN; hypothetical protein complement(3655879..3657135) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459643 YP_001423114.1 CDS ywbM NC_009725.1 3657154 3657348 R hypothetical protein YwbM; hypothetical protein complement(3657154..3657348) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459644 YP_001423115.1 CDS thiE NC_009725.1 3657549 3658223 R Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate; thiamine-phosphate pyrophosphorylase complement(3657549..3658223) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462270 YP_001423116.1 CDS thiM NC_009725.1 3658220 3659038 R catalyzes the formation of 4-methyl-5-(2-phosphoethyl)-thiazole and ADP from 4-methyl-5-(2-hydroxyethyl)-thiazole and ATP; hydroxyethylthiazole kinase complement(3658220..3659038) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462271 YP_001423117.1 CDS ywbI NC_009725.1 3659041 3659949 R transcription regulator YwbI; hypothetical protein complement(3659041..3659949) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462272 YP_001423118.1 CDS ywbH NC_009725.1 3660056 3660442 D increases the activity of extracellular murein hydrolases possibly by mediating their export via hole formation; inhibited by the antiholin-like proteins lrgAB; holin-like protein 3660056..3660442 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462273 YP_001423119.1 CDS ywbG NC_009725.1 3660424 3661104 D conserved hypothetical protein YwbG; hypothetical protein 3660424..3661104 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462274 YP_001423120.1 CDS ywbE NC_009725.1 3661224 3661427 D conserved hypothetical protein YwbE; hypothetical protein 3661224..3661427 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462275 YP_001423121.1 CDS RBAM_035610 NC_009725.1 3661583 3662344 D MerR family transcriptional regulator 3661583..3662344 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462276 YP_001423122.1 CDS RBAM_035620 NC_009725.1 3662331 3663233 D Zn-dependent protease 3662331..3663233 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460508 YP_001423123.1 CDS ywbD NC_009725.1 3663316 3664503 R conserved hypothetical protein YwbD; hypothetical protein complement(3663316..3664503) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460509 YP_001423124.1 CDS ywbC NC_009725.1 3664598 3664981 D conserved hypothetical protein YwbC; hypothetical protein 3664598..3664981 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460510 YP_001423125.1 CDS ywbA NC_009725.1 3665009 3666343 R PTS system IIBC component YwbA; hypothetical protein complement(3665009..3666343) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460511 YP_001423126.1 CDS epr NC_009725.1 3666505 3668250 D minor extracellular protease Epr precursor; hypothetical protein 3666505..3668250 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460512 YP_001423127.1 CDS gspA NC_009725.1 3668307 3669149 R general stress protein A (GspA); GspA complement(3668307..3669149) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460513 YP_001423128.1 CDS ywaC NC_009725.1 3669427 3670059 R conserved hypothetical protein YwaC; hypothetical protein complement(3669427..3670059) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460514 YP_001423129.1 CDS menA NC_009725.1 3670191 3671126 R catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate; 1,4-dihydroxy-2-naphthoate octaprenyltransferase complement(3670191..3671126) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460006 YP_001423130.1 CDS RBAM_035700 NC_009725.1 3671564 3671719 D hypothetical protein 3671564..3671719 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460007 YP_001423131.1 CDS dltA NC_009725.1 3671735 3673246 D transfers D-alanine to the D-alanyl carrier protein during the incorporation of D-alanine into lipoteichoic acid; D-alanine--poly(phosphoribitol) ligase subunit 1 3671735..3673246 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460008 YP_001423132.1 CDS dltB NC_009725.1 3673243 3674424 D D-alanine export protein DltB; hypothetical protein 3673243..3674424 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460009 YP_001423133.1 CDS dltC NC_009725.1 3674441 3674677 D D-alanyl carrier protein subunit; involved in the incorporation of D-alanine into membrane-associated D-alanyl-lipoteichoic acid; D-alanyl carrier protein is the acceptor of activated D-alanine which it donates to a membrane acceptor(D-alanyl transferase) for incorporation into membrane lipoteichoic acid; D-alanine--poly(phosphoribitol) ligase subunit 2 3674441..3674677 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460010 YP_001423134.1 CDS dltD NC_009725.1 3674678 3675856 D undecaprenol-phosphate-poly(glycerophosphate chain) D-alanine transfer protein DltD; DltD 3674678..3675856 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460011 YP_001423135.1 CDS ywaA NC_009725.1 3676043 3677131 D catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 3676043..3677131 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460012 YP_001423136.1 CDS licH NC_009725.1 3677172 3678500 R 6-phospho-beta-glucosidase LicH; LicH complement(3677172..3678500) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461345 YP_001423137.1 CDS licA NC_009725.1 3678497 3678829 R phosphotransferase system (PTS) lichenan specific enzyme IIA component LicA; LicA complement(3678497..3678829) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461346 YP_001423138.1 CDS licC NC_009725.1 3678848 3680206 R phosphotransferase system (PTS) lichenan specific enzyme IIC component LicC; LicC complement(3678848..3680206) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461347 YP_001423139.1 CDS licB NC_009725.1 3680222 3680530 R phosphotransferase system (PTS) lichenan specific enzyme IIB component LicB; LicB complement(3680222..3680530) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461348 YP_001423140.1 CDS licR NC_009725.1 3680629 3682584 R licABCH operon regulator LicR; LicR complement(3680629..3682584) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461349 YP_001423141.1 CDS yxlJ NC_009725.1 3682917 3683507 R responsible for recognizing base lesions in the genome and initiating base excision DNA repair; 3-methyladenine DNA glycosylase complement(3682917..3683507) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461350 YP_001423142.1 CDS RBAM_035820 NC_009725.1 3683720 3684748 D ferrichrome transport system permease 3683720..3684748 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461351 YP_001423143.1 CDS RBAM_035830 NC_009725.1 3684749 3685762 D ferrichrome ABC transporter (permease) 3684749..3685762 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460212 YP_001423144.1 CDS RBAM_035840 NC_009725.1 3685779 3686675 D iron ABC transporter substrate-binding protein 3685779..3686675 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460213 YP_001423145.1 CDS ydeT NC_009725.1 3686778 3687128 D transcriptional regulator, arsR family; hypothetical protein 3686778..3687128 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460214 YP_001423146.1 CDS ydfA NC_009725.1 3687142 3688440 D arsenical pump membrane protein; hypothetical protein 3687142..3688440 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460215 YP_001423147.1 CDS ydhM NC_009725.1 3688594 3688905 D cellobiose phosphotransferase system enzyme; hypothetical protein 3688594..3688905 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460216 YP_001423148.1 CDS ydhN NC_009725.1 3688920 3689237 D cellobiose phosphotransferase system enzyme; hypothetical protein 3688920..3689237 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460217 YP_001423149.1 CDS ydhO NC_009725.1 3689256 3690575 D cellobiose phosphotransferase system enzyme YdhO; hypothetical protein 3689256..3690575 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460218 YP_001423150.1 CDS ydhP NC_009725.1 3690605 3692005 D beta-glucosidase YdhP; hypothetical protein 3690605..3692005 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462733 YP_001423151.1 CDS ydhR NC_009725.1 3692025 3692906 D fructokinase YdhR; hypothetical protein 3692025..3692906 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462734 YP_001423152.1 CDS ydhS NC_009725.1 3692903 3693847 D mannose-6-phosphate isomerase YdhS; hypothetical protein 3692903..3693847 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462735 YP_001423153.1 CDS ydhT NC_009725.1 3693867 3694949 D Mannan endo-1,4-beta-mannosidase YdhT; hypothetical protein 3693867..3694949 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462736 YP_001423154.1 CDS katX NC_009725.1 3695027 3696640 D major catalase KatX; KatX 3695027..3696640 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462737 YP_001423155.1 CDS yxeI NC_009725.1 3696679 3697665 R penicillin amidase YxeI; hypothetical protein complement(3696679..3697665) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462738 YP_001423156.1 CDS yxlA NC_009725.1 3697982 3699340 D purine-cytosine permease YxlA; hypothetical protein 3697982..3699340 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462739 YP_001423157.1 CDS yxkO NC_009725.1 3699354 3700184 R conserved hypothetical protein YxkO; hypothetical protein complement(3699354..3700184) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461370 YP_001423158.1 CDS cydD NC_009725.1 3700276 3702006 R ABC membrane transporter (ATP-binding protein) CydD; CydD complement(3700276..3702006) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461371 YP_001423159.1 CDS cydC NC_009725.1 3702003 3703706 R ABC membrane transporter (ATP-binding protein) CydC; CydC complement(3702003..3703706) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461372 YP_001423160.1 CDS cydB NC_009725.1 3703706 3704722 R cytochrome d ubiquinol oxidase (subunit II) CydB; CydB complement(3703706..3704722) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461373 YP_001423161.1 CDS cydA NC_009725.1 3704706 3706112 R cytochrome d ubiquinol oxidase (subunit I) CydA; CydA complement(3704706..3706112) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461374 YP_001423162.1 CDS cimH NC_009725.1 3706615 3707958 D citrate/malate transporter CimH; CimH 3706615..3707958 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461375 YP_001423163.1 CDS yxkH NC_009725.1 3707993 3708835 R conserved hypothetical protein YxkH; hypothetical protein complement(3707993..3708835) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461376 YP_001423164.1 CDS msmX NC_009725.1 3708935 3710035 R multiple sugar-binding transport ATP-binding protein MsmX; MsmX complement(3708935..3710035) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462667 YP_001423165.1 CDS yxkF NC_009725.1 3710153 3711046 R hypothetical protein YxkF; hypothetical protein complement(3710153..3711046) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462668 YP_001423166.1 CDS yxkD NC_009725.1 3711213 3712049 R conserved hypothetical protein YxkD; hypothetical protein complement(3711213..3712049) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462669 YP_001423167.1 CDS yxkC NC_009725.1 3712464 3713102 D hypothetical protein YxkC; hypothetical protein 3712464..3713102 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462670 YP_001423168.1 CDS galE NC_009725.1 3713149 3714165 R UDP-glucose 4-epimerase GalE; hypothetical protein complement(3713149..3714165) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462671 YP_001423169.1 CDS pepT NC_009725.1 3714376 3715608 D catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T 3714376..3715608 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462672 YP_001423170.1 CDS yxjJ NC_009725.1 3716186 3716353 D hypothetical protein YxjJ; hypothetical protein 3716186..3716353 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462673 YP_001423171.1 CDS yxjI NC_009725.1 3716457 3716933 D conserved hypothetical protein YxjI; hypothetical protein 3716457..3716933 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459916 YP_001423172.1 CDS yxjG NC_009725.1 3717183 3718319 D conserved hypothetical protein YxjG; hypothetical protein 3717183..3718319 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459917 YP_001423173.1 CDS yxjB NC_009725.1 3718354 3719235 R hypothetical protein YxjB; hypothetical protein complement(3718354..3719235) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459918 YP_001423174.1 CDS yxjA NC_009725.1 3719836 3721029 D transport protein YxjA; hypothetical protein 3719836..3721029 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459919 YP_001423175.1 CDS RBAM_036150 NC_009725.1 3721077 3721751 R hypothetical protein complement(3721077..3721751) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459920 YP_001423176.1 CDS yxiS NC_009725.1 3721892 3722200 R hypothetical protein YxiS; hypothetical protein complement(3721892..3722200) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459921 YP_001423177.1 CDS katE NC_009725.1 3722461 3724512 R catalase KatE; KatE complement(3722461..3724512) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459922 YP_001423178.1 CDS citH NC_009725.1 3724713 3725993 D citrate transporter CitH; CitH 3724713..3725993 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459815 YP_001423179.1 CDS bglS NC_009725.1 3726035 3726766 R pfam00722; glyco_hydro_16; endo-beta-1,3-1,4 glucanase; BglS complement(3726035..3726766) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459816 YP_001423180.1 CDS licT NC_009725.1 3727002 3727829 R transcriptional antiterminator (BglG family) LicT; LicT complement(3727002..3727829) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459817 YP_001423181.1 CDS yxiO NC_009725.1 3727968 3729251 D conserved hypothetical protein YxiO; hypothetical protein 3727968..3729251 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459818 YP_001423182.1 CDS dbpA NC_009725.1 3729283 3730722 R ATP-dependent RNA helicase DbpA; DbpA complement(3729283..3730722) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459819 YP_001423183.1 CDS RBAM_036230 NC_009725.1 3730777 3731151 R hypothetical protein complement(3730777..3731151) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459820 YP_001423184.1 CDS RBAM_036240 NC_009725.1 3731132 3731467 R hypothetical protein complement(3731132..3731467) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459821 YP_001423185.1 CDS RBAM_036250 NC_009725.1 3731454 3731819 R hypothetical protein complement(3731454..3731819) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460457 YP_001423186.1 CDS yxiI NC_009725.1 3731869 3732330 R hypothetical protein YxiI; hypothetical protein complement(3731869..3732330) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460458 YP_001423187.1 CDS yxiK NC_009725.1 3732375 3732854 R hypothetical protein YxiK; hypothetical protein complement(3732375..3732854) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460459 YP_001423188.1 CDS yxiG NC_009725.1 3732922 3733329 R hypothetical protein YxiG; hypothetical protein complement(3732922..3733329) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460460 YP_001423189.1 CDS yxxG NC_009725.1 3733333 3733743 R hypothetical protein YxxG; hypothetical protein complement(3733333..3733743) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460461 YP_001423190.1 CDS RBAM_036300 NC_009725.1 3733944 3734390 R hypothetical protein complement(3733944..3734390) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460462 YP_001423191.1 CDS RBAM_036310 NC_009725.1 3734405 3734623 R hypothetical protein complement(3734405..3734623) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460463 YP_001423192.1 CDS pelB NC_009725.1 3735173 3736237 R pectate lyase PelB; PelB complement(3735173..3736237) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460107 YP_001423193.1 CDS yxxF NC_009725.1 3736380 3737291 R conserved hypothetical protein YxxF; hypothetical protein complement(3736380..3737291) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460108 YP_001423194.1 CDS yxiE NC_009725.1 3737439 3737885 R conserved hypothetical protein YxiE; hypothetical protein complement(3737439..3737885) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460109 YP_001423195.1 CDS bglH NC_009725.1 3737967 3739364 R beta-glucosidase BglH; BglH complement(3737967..3739364) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460110 YP_001423196.1 CDS bglP NC_009725.1 3739383 3741218 R phosphotransferase system (PTS) beta-glucoside-specific enzyme IIBCA component BglP; BglP complement(3739383..3741218) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460111 YP_001423197.1 CDS RBAM_036370 NC_009725.1 3741886 3745017 D hypothetical protein 3741886..3745017 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460112 YP_001423198.1 CDS RBAM_036380 NC_009725.1 3745006 3745395 R hypothetical protein complement(3745006..3745395) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460113 YP_001423199.1 CDS yxiA NC_009725.1 3745575 3746981 R conserved hypothetical protein YxiA; hypothetical protein complement(3745575..3746981) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460292 YP_001423200.1 CDS hutP NC_009725.1 3747223 3747669 D regulates expression of hut operon by antitermination mechanism; forms a homohexamer; binds both magnesium and L-histidine and then binds RNA sequences within the terminator region and destabilizes the terminator structure; anti-terminator HutP 3747223..3747669 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460293 YP_001423201.1 CDS hutH NC_009725.1 3747779 3749320 D catalyzes the degradation of histidine to urocanate and ammmonia; histidine ammonia-lyase 3747779..3749320 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460294 YP_001423202.1 CDS hutU NC_009725.1 3749317 3750981 D catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism; urocanate hydratase 3749317..3750981 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460295 YP_001423203.1 CDS hutI NC_009725.1 3750983 3752248 D catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway; imidazolonepropionase 3750983..3752248 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460296 YP_001423204.1 CDS hutG NC_009725.1 3752241 3753191 D catalyzes the formation of glutamate and formamide from N-formimidoyl-L-glutamate; formimidoylglutamase 3752241..3753191 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460297 YP_001423205.1 CDS hutM NC_009725.1 3753262 3754680 D histidine permease HutM; HutM 3753262..3754680 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460298 YP_001423206.1 CDS pdp NC_009725.1 3754720 3756021 R Catalyzes the reversible phosphorolysis of pyrimidines in the nucleotide synthesis salvage pathway; pyrimidine-nucleoside phosphorylase complement(3754720..3756021) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459958 YP_001423207.1 CDS nupC NC_009725.1 3756049 3757230 R pyrimidine-nucleoside transport protein NupC; NupC complement(3756049..3757230) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459959 YP_001423208.1 CDS deoC NC_009725.1 3757323 3757991 R deoxyribose-phosphate aldolase DeoC; hypothetical protein complement(3757323..3757991) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459960 YP_001423209.1 CDS deoR NC_009725.1 3758082 3759023 R deoxyribonucleoside negative regulator DeoR; hypothetical protein complement(3758082..3759023) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459961 YP_001423210.1 CDS yxeH NC_009725.1 3759094 3759906 R conserved hypothetical protein YxeH; hypothetical protein complement(3759094..3759906) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459962 YP_001423211.1 CDS yxeG NC_009725.1 3759975 3760499 R hypothetical protein YxeG; hypothetical protein complement(3759975..3760499) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459963 YP_001423212.1 CDS yxeF NC_009725.1 3760489 3760905 R hypothetical protein YxeF; hypothetical protein complement(3760489..3760905) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459964 YP_001423213.1 CDS yxeE NC_009725.1 3761019 3761405 D hypothetical protein YxeE; hypothetical protein 3761019..3761405 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462170 YP_001423214.1 CDS yxeD NC_009725.1 3761563 3761928 D hypothetical protein YxeD; hypothetical protein 3761563..3761928 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462171 YP_001423215.1 CDS yxeC NC_009725.1 3761979 3762239 R conserved hypothetical protein YxeC; hypothetical protein complement(3761979..3762239) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462172 YP_001423216.1 CDS yxeB NC_009725.1 3762500 3763462 D ABC transporter (binding protein) YxeB; hypothetical protein 3762500..3763462 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462173 YP_001423217.1 CDS RBAM_036570 NC_009725.1 3763584 3763916 D transposase 3763584..3763916 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462174 YP_001423218.1 CDS RBAM_036580 NC_009725.1 3763922 3764734 D transposases lmo0828-like protein 3763922..3764734 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462175 YP_001423219.1 CDS yxeA NC_009725.1 3764800 3765147 R hypothetical protein YxeA; hypothetical protein complement(3764800..3765147) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462176 YP_001423220.1 CDS yxdM NC_009725.1 3765161 3767029 R hypothetical protein YxdM; hypothetical protein complement(3765161..3767029) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460590 YP_001423221.1 CDS yxdL NC_009725.1 3767004 3767777 R ABC transporter (ATP-binding protein) YxdL; hypothetical protein complement(3767004..3767777) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460591 YP_001423222.1 CDS yxdK NC_009725.1 3767921 3768871 R two-component sensor histidine kinase YxdK; hypothetical protein complement(3767921..3768871) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460592 YP_001423223.1 CDS yxdJ NC_009725.1 3768895 3769584 R two-component response regulator YxdJ; hypothetical protein complement(3768895..3769584) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460593 YP_001423224.1 CDS mrsK2 NC_009725.1 3769734 3771173 R sensor histidine kinase MrsK2; MrsK2 complement(3769734..3771173) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460594 YP_001423225.1 CDS mrsR2 NC_009725.1 3771170 3771892 R response-regulator MrsR2; MrsR2 complement(3771170..3771892) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460595 YP_001423226.1 CDS mrsF NC_009725.1 3772135 3773046 D ABC transporter, ATP-binding protein MrsF; MrsF 3772135..3773046 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460596 YP_001423227.1 CDS mrsG NC_009725.1 3773043 3773801 D ABC-transporter integral membrane protein MrsG; MrsG 3773043..3773801 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462660 YP_001423228.1 CDS mrsE NC_009725.1 3773818 3774552 D ABC-transporter integral membrane protein MrsE; MrsE 3773818..3774552 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462661 YP_001423229.1 CDS fbaB NC_009725.1 3774830 3775702 R fructose-1,6-bisphosphate aldolase FbaB; hypothetical protein complement(3774830..3775702) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462662 YP_001423230.1 CDS iolI NC_009725.1 3775705 3776547 R inositol utilization protein I (IolI); hypothetical protein complement(3775705..3776547) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462663 YP_001423231.1 CDS iolH NC_009725.1 3776635 3777504 R inositol utilization protein H (IolH); hypothetical protein complement(3776635..3777504) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462664 YP_001423232.1 CDS iolG NC_009725.1 3777524 3778558 R myo-inositol 2-dehydrogenase IolG; hypothetical protein complement(3777524..3778558) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462665 YP_001423233.1 CDS iolF NC_009725.1 3778581 3779876 R inositol transport protein IolF; hypothetical protein complement(3778581..3779876) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462666 YP_001423234.1 CDS iolE NC_009725.1 3779889 3780785 R inositol utilization protein E (IolE); hypothetical protein complement(3779889..3780785) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462142 YP_001423235.1 CDS iolD NC_009725.1 3780801 3782714 R inositol utilization protein D (IolD); hypothetical protein complement(3780801..3782714) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462143 YP_001423236.1 CDS iolC NC_009725.1 3782739 3783731 R inositol utilization protein C (IolC); hypothetical protein complement(3782739..3783731) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462144 YP_001423237.1 CDS iolB NC_009725.1 3783755 3784570 R inositol utilization protein B (IolB); hypothetical protein complement(3783755..3784570) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462145 YP_001423238.1 CDS iolA NC_009725.1 3784644 3786107 R methylmalonate-semialdehyde dehydrogenase IolA; hypothetical protein complement(3784644..3786107) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462146 YP_001423239.1 CDS iolR NC_009725.1 3786552 3787307 D iol operon repressor (DNA-binding protein) IolR; hypothetical protein 3786552..3787307 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462147 YP_001423240.1 CDS iolS NC_009725.1 3787385 3788317 D inositol utilization protein S (IolS); hypothetical protein 3787385..3788317 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462148 YP_001423241.1 CDS csbC NC_009725.1 3788436 3789824 D sugar transporter CsbC; hypothetical protein 3788436..3789824 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459862 YP_001423242.1 CDS htpG NC_009725.1 3789867 3791747 R molecular chaperone; heat shock protein 90 complement(3789867..3791747) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459863 YP_001423243.1 CDS yxcA NC_009725.1 3791919 3792167 R hypothetical protein YxcA; hypothetical protein complement(3791919..3792167) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459864 YP_001423244.1 CDS yxbG NC_009725.1 3792296 3793117 D hypothetical oxidoreductase YxbG; short chain dehydrogenase 3792296..3793117 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459865 YP_001423245.1 CDS yocG NC_009725.1 3793174 3793773 R response regulators YocG; hypothetical protein complement(3793174..3793773) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459866 YP_001423246.1 CDS yocF NC_009725.1 3793770 3794906 R two-component sensor histidine kinase YocF; hypothetical protein complement(3793770..3794906) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459867 YP_001423247.1 CDS des NC_009725.1 3795025 3796074 R fatty acid desaturase Des; fatty acid desaturase complement(3795025..3796074) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459868 YP_001423248.1 CDS yxbF NC_009725.1 3796319 3797476 R conserved hypothetical protein YxbF; hypothetical protein complement(3796319..3797476) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462071 YP_001423249.1 CDS aldX NC_009725.1 3797618 3798955 D aldehyde dehydrogenase AldX; AldX 3797618..3798955 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462072 YP_001423250.1 CDS yxaL NC_009725.1 3798993 3800240 R conserved hypothetical protein YxaL; hypothetical protein complement(3798993..3800240) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462073 YP_001423251.1 CDS yxaJ NC_009725.1 3800344 3800763 R hypothetical protein YxaJ; hypothetical protein complement(3800344..3800763) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462074 YP_001423252.1 CDS RBAM_036920 NC_009725.1 3800906 3801217 D hypothetical protein 3800906..3801217 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462075 YP_001423253.1 CDS RBAM_036930 NC_009725.1 3801296 3802462 D hypothetical protein 3801296..3802462 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462076 YP_001423254.1 CDS yxaI NC_009725.1 3802532 3802987 D conserved hypothetical protein YxaI; hypothetical protein 3802532..3802987 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462077 YP_001423255.1 CDS RBAM_036950 NC_009725.1 3803024 3803710 R hypothetical protein complement(3803024..3803710) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460920 YP_001423256.1 CDS ahpC NC_009725.1 3804009 3804572 D alkyl hydroperoxide reductase subunit C (small subunit) AhpC; hypothetical protein 3804009..3804572 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460921 YP_001423257.1 CDS ahpF NC_009725.1 3804586 3806115 D alkyl hydroperoxide reductase (large subunit) and NADH dehydrogenase AhpF; AhpF 3804586..3806115 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460922 YP_001423258.1 CDS RBAM_036980 NC_009725.1 3806160 3807392 R hypothetical protein complement(3806160..3807392) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460923 YP_001423259.1 CDS ydgF NC_009725.1 3807532 3808878 R amino acid permease YdgF; hypothetical protein complement(3807532..3808878) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460924 YP_001423260.1 CDS fbp NC_009725.1 3809403 3811328 D fructose-1,6-bisphosphatase Fbp; Fbp 3809403..3811328 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460925 YP_001423261.1 CDS RBAM_037010 NC_009725.1 3811368 3811826 R carbon monoxide dehydrogenase small subunit complement(3811368..3811826) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460926 YP_001423262.1 CDS RBAM_037020 NC_009725.1 3811819 3812661 R xanthine dehydrogenase FAD-binding subunit complement(3811819..3812661) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462642 YP_001423263.1 CDS RBAM_037030 NC_009725.1 3812648 3814978 R carbon monoxide dehydrogenase large subunit complement(3812648..3814978) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462643 YP_001423264.1 CDS RBAM_037040 NC_009725.1 3814984 3815508 R xanthine dehydrogenase complement(3814984..3815508) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462644 YP_001423265.1 CDS RBAM_037050 NC_009725.1 3815601 3816617 R xanthine dehydrogenase complement(3815601..3816617) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462645 YP_001423266.1 CDS RBAM_037060 NC_009725.1 3816686 3817702 R hypothetical protein complement(3816686..3817702) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462646 YP_001423267.1 CDS RBAM_037070 NC_009725.1 3817960 3818205 R hypothetical protein complement(3817960..3818205) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462647 YP_001423268.1 CDS RBAM_037080 NC_009725.1 3818387 3818572 R hypothetical protein complement(3818387..3818572) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462648 YP_001423269.1 CDS RBAM_037090 NC_009725.1 3818622 3818864 R hypothetical protein complement(3818622..3818864) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459594 YP_001423270.1 CDS RBAM_037100 NC_009725.1 3818959 3819198 R hypothetical protein complement(3818959..3819198) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459595 YP_001423271.1 CDS RBAM_037110 NC_009725.1 3819281 3819514 R hypothetical protein complement(3819281..3819514) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459596 YP_001423272.1 CDS RBAM_037120 NC_009725.1 3819757 3821556 R hypothetical protein complement(3819757..3821556) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459597 YP_001423273.1 CDS RBAM_037130 NC_009725.1 3822228 3823478 R hypothetical protein complement(3822228..3823478) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459598 YP_001423274.1 CDS RBAM_037140 NC_009725.1 3823947 3824945 R hypothetical protein complement(3823947..3824945) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459599 YP_001423275.1 CDS yydA NC_009725.1 3825100 3825579 R SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase complement(3825100..3825579) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459600 YP_001423276.1 CDS RBAM_037160 NC_009725.1 3825925 3826170 R hypothetical protein complement(3825925..3826170) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461122 YP_001423277.1 CDS RBAM_037170 NC_009725.1 3826211 3826423 R hypothetical protein complement(3826211..3826423) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461123 YP_001423278.1 CDS yycP NC_009725.1 3826474 3827637 R hypothetical protein YycP; hypothetical protein complement(3826474..3827637) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461124 YP_001423279.1 CDS yycO NC_009725.1 3827648 3828397 R conserved hypothetical protein; expressed in presence of soil extract; hypothetical protein complement(3827648..3828397) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461125 YP_001423280.1 CDS RBAM_037200 NC_009725.1 3828580 3829560 D hypothetical protein 3828580..3829560 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461126 YP_001423281.1 CDS yycN NC_009725.1 3829590 3830063 R conserved hypothetical protein YycN; hypothetical protein complement(3829590..3830063) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461127 YP_001423282.1 CDS RBAM_037220 NC_009725.1 3830232 3831347 R hypothetical protein complement(3830232..3831347) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461128 YP_001423283.1 CDS rocF NC_009725.1 3831478 3832368 R arginase RocF; RocF complement(3831478..3832368) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460705 YP_001423284.1 CDS rocE NC_009725.1 3832442 3833842 R amino acid permease RocE; RocE complement(3832442..3833842) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460706 YP_001423285.1 CDS rocD NC_009725.1 3834066 3835271 R ornithine aminotransferase RocD; ornithine--oxo-acid transaminase complement(3834066..3835271) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460707 YP_001423286.1 CDS rocR NC_009725.1 3835491 3836894 D arginine utilization regulatory protein RocR; hypothetical protein 3835491..3836894 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460708 YP_001423287.1 CDS RBAM_037270 NC_009725.1 3836936 3837655 R hypothetical protein complement(3836936..3837655) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460709 YP_001423288.1 CDS RBAM_037280 NC_009725.1 3837669 3839294 R ABC transporter ATP-binding protein complement(3837669..3839294) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460710 YP_001423289.1 CDS RBAM_037290 NC_009725.1 3839322 3840512 R hypothetical protein complement(3839322..3840512) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460711 YP_001423290.1 CDS RBAM_037300 NC_009725.1 3840531 3841853 R hypothetical protein complement(3840531..3841853) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461414 YP_001423291.1 CDS RBAM_037310 NC_009725.1 3841850 3842962 R hypothetical protein complement(3841850..3842962) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461415 YP_001423292.1 CDS RBAM_037320 NC_009725.1 3843089 3844507 R signal transduction histidine kinase complement(3843089..3844507) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461416 YP_001423293.1 CDS RBAM_037330 NC_009725.1 3844504 3844713 R hypothetical protein complement(3844504..3844713) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461417 YP_001423294.1 CDS RBAM_037340 NC_009725.1 3845059 3845142 R hypothetical protein complement(3845059..3845142) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461418 YP_001423295.1 CDS yyxA NC_009725.1 3845225 3846421 R serine proteinase YyxA; hypothetical protein complement(3845225..3846421) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461419 YP_001423296.1 CDS yycJ NC_009725.1 3846508 3847302 R conserved hypothetical protein YycJ; hypothetical protein complement(3846508..3847302) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461420 YP_001423297.1 CDS yycI NC_009725.1 3847317 3848156 R conserved hypothetical protein YycI; hypothetical protein complement(3847317..3848156) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462188 YP_001423298.1 CDS yycH NC_009725.1 3848143 3849501 R conserved hypothetical protein YycH; hypothetical protein complement(3848143..3849501) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462189 YP_001423299.1 CDS yycG NC_009725.1 3849491 3851326 R two-component sensor histidine kinase YycG; hypothetical protein complement(3849491..3851326) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462190 YP_001423300.1 CDS yycF NC_009725.1 3851333 3852043 R two-component response regulator YycF; hypothetical protein complement(3851333..3852043) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462191 YP_001423301.1 CDS purA NC_009725.1 3853006 3854298 R catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase complement(3853006..3854298) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460682 YP_001423302.1 CDS yycE NC_009725.1 3854537 3854953 R conserved hypothetical protein YycE; hypothetical protein complement(3854537..3854953) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460683 YP_001423303.1 CDS dnaC NC_009725.1 3855067 3856440 R unwinds double stranded DNA; replicative DNA helicase complement(3855067..3856440) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460026 YP_001423304.1 CDS yycD NC_009725.1 3856602 3856799 D hypothetical protein YycD; hypothetical protein 3856602..3856799 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460027 YP_001423305.1 CDS yyzB NC_009725.1 3856830 3857039 R hypothetical protein YyzB; hypothetical protein complement(3856830..3857039) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460028 YP_001423306.1 CDS yycC NC_009725.1 3857158 3857301 D hypothetical protein YycC; hypothetical protein 3857158..3857301 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460029 YP_001423307.1 CDS yycA NC_009725.1 3857375 3857638 D hypothetical protein YycA; hypothetical protein 3857375..3857638 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460030 YP_001423308.1 CDS RBAM_037520 NC_009725.1 3857718 3859010 R hypothetical protein complement(3857718..3859010) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460031 YP_001423309.1 CDS RBAM_037530 NC_009725.1 3859033 3860088 R hypothetical protein complement(3859033..3860088) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460032 YP_001423310.1 CDS RBAM_037540 NC_009725.1 3860081 3861268 R hypothetical protein complement(3860081..3861268) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460625 YP_001423311.1 CDS RBAM_037550 NC_009725.1 3861258 3862592 R hypothetical protein complement(3861258..3862592) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460626 YP_001423312.1 CDS RBAM_037560 NC_009725.1 3862589 3863284 R hypothetical protein complement(3862589..3863284) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460627 YP_001423313.1 CDS RBAM_037570 NC_009725.1 3863333 3863998 R hypothetical protein complement(3863333..3863998) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460628 YP_001423314.1 CDS rplI NC_009725.1 3864040 3864489 R in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 complement(3864040..3864489) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460629 YP_001423315.1 CDS yybT NC_009725.1 3864486 3866465 R conserved hypothetical protein YybT; hypothetical protein complement(3864486..3866465) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460630 YP_001423316.1 CDS yybS NC_009725.1 3866496 3867431 R conserved hypothetical protein YybS; hypothetical protein complement(3866496..3867431) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460631 YP_001423317.1 CDS cotF NC_009725.1 3867961 3868446 D spore coat protein F (CotF); spore coat protein F 3867961..3868446 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463027 YP_001423318.1 CDS yybR NC_009725.1 3868483 3868854 R conserved hypothetical protein YybR; hypothetical protein complement(3868483..3868854) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463028 YP_001423319.1 CDS ppaC NC_009725.1 3869061 3869990 D catalyzes the hydrolysis of pyrophosphate to phosphate; manganese-dependent inorganic pyrophosphatase 3869061..3869990 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463029 YP_001423320.1 CDS RBAM_037640 NC_009725.1 3870176 3871093 D hypothetical protein 3870176..3871093 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463030 YP_001423321.1 CDS sacB NC_009725.1 3871441 3872862 D levansucrase; pfam02435; glycosyl hydrolase family 68; levan is implicated in the aggregation of wheatroot-adhering soil; SacB 3871441..3872862 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463031 YP_001423322.1 CDS yveB NC_009725.1 3872936 3874480 D conserved hypothetical protein YveB; hypothetical protein 3872936..3874480 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463032 YP_001423323.1 CDS RBAM_037670 NC_009725.1 3874560 3875222 D transcriptional regulator 3874560..3875222 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463033 YP_001423324.1 CDS dinB NC_009725.1 3875300 3875809 R nuclease inhibitor DinB; DinB complement(3875300..3875809) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460632 YP_001423325.1 CDS yfmI1 NC_009725.1 3875860 3876774 R hypothetical protein YfmI1; hypothetical protein complement(3875860..3876774) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460633 YP_001423326.1 CDS yfm2 NC_009725.1 3876802 3877071 R hypothetical protein YfmI2; hypothetical protein complement(3876802..3877071) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460634 YP_001423327.1 CDS RBAM_037710 NC_009725.1 3877260 3878138 R hypothetical protein complement(3877260..3878138) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460635 YP_001423328.1 CDS RBAM_037720 NC_009725.1 3878265 3878843 D hypothetical protein 3878265..3878843 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460636 YP_001423329.1 CDS yybF NC_009725.1 3878862 3880064 R conserved hypothetical protein YybF; hypothetical protein complement(3878862..3880064) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460637 YP_001423330.1 CDS yybE NC_009725.1 3880065 3880955 R HTH-type transcriptional regulator YybE; hypothetical protein complement(3880065..3880955) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460638 YP_001423331.1 CDS RBAM_037750 NC_009725.1 3881112 3881480 R hypothetical protein complement(3881112..3881480) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460878 YP_001423332.1 CDS ydgI NC_009725.1 3881511 3882149 R NADH dehydrogenase YdgI; hypothetical protein complement(3881511..3882149) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460879 YP_001423333.1 CDS ydgJ NC_009725.1 3882163 3882597 R HTH-type transcriptional regulator YdgJ; hypothetical protein complement(3882163..3882597) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460880 YP_001423334.1 CDS ydeO NC_009725.1 3882736 3883614 R conserved hypothetical protein YdeO; hypothetical protein complement(3882736..3883614) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460881 YP_001423335.1 CDS yybA NC_009725.1 3883798 3884250 R transcription regulator homolog YybA; hypothetical protein complement(3883798..3884250) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460882 YP_001423336.1 CDS yyaT NC_009725.1 3884371 3884802 D conserved hypothetical protein YyaT; hypothetical protein 3884371..3884802 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460883 YP_001423337.1 CDS RBAM_037810 NC_009725.1 3885154 3886020 D hypothetical protein 3885154..3886020 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460884 YP_001423338.1 CDS RBAM_037820 NC_009725.1 3886202 3886603 R hypothetical protein complement(3886202..3886603) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461079 YP_001423339.1 CDS RBAM_037830 NC_009725.1 3886708 3887616 R HTH-type transcriptional regulator complement(3886708..3887616) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461080 YP_001423340.1 CDS yxjF1 NC_009725.1 3887714 3888520 D catalyzes the formation of acetoacetate from 3-hydroxybutyrate; 3-hydroxybutyrate dehydrogenase 3887714..3888520 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461081 YP_001423341.1 CDS RBAM_037850 NC_009725.1 3888774 3889319 D hypothetical protein 3888774..3889319 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461082 YP_001423342.1 CDS yyaL1 NC_009725.1 3889563 3889733 D hypothetical protein YyaL1; hypothetical protein 3889563..3889733 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461083 YP_001423343.1 CDS RBAM_037870 NC_009725.1 3889880 3890377 D hypothetical protein 3889880..3890377 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461084 YP_001423344.1 CDS ynaF NC_009725.1 3890402 3890812 D conserved hypothetical protei YnaF; hypothetical protein 3890402..3890812 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461085 YP_001423345.1 CDS RBAM_037890 NC_009725.1 3891683 3893002 D hypothetical protein 3891683..3893002 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459732 YP_001423346.1 CDS yyaL NC_009725.1 3893654 3895723 D conserved hypothetical protein YyaL; hypothetical protein 3893654..3895723 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459733 YP_001423347.1 CDS yyaK NC_009725.1 3895720 3896616 R conserved hypothetical protein YyaK; hypothetical protein complement(3895720..3896616) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459734 YP_001423348.1 CDS yyaJ NC_009725.1 3896831 3898162 D conserved hypothetical protein YyaJ; hypothetical protein 3896831..3898162 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459735 YP_001423349.1 CDS yyaH NC_009725.1 3898195 3898575 R conserved hypothetical protein YyaH; hypothetical protein complement(3898195..3898575) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459736 YP_001423350.1 CDS ccpB NC_009725.1 3898631 3899569 R catabolite control protein B (CcpB); CcpB complement(3898631..3899569) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459737 YP_001423351.1 CDS exoA NC_009725.1 3899632 3900390 R exodeoxyribonuclease ExoA; ExoA complement(3899632..3900390) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459738 YP_001423352.1 CDS adaB NC_009725.1 3900387 3900944 R O-6-methylguanine-DNA alkyltransferase AdaB; AdaB complement(3900387..3900944) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460094 YP_001423353.1 CDS adaA NC_009725.1 3900941 3901522 R methylphosphotriester-DNA alkyltransferase AdaA; AdaA complement(3900941..3901522) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460095 YP_001423354.1 CDS rpsR NC_009725.1 3901713 3901958 R binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 complement(3901713..3901958) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460096 YP_001423355.1 CDS ssb NC_009725.1 3901996 3902514 R single-strand DNA-binding protein (Helix-destabilizing protein) Ssb; hypothetical protein complement(3901996..3902514) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460097 YP_001423356.1 CDS rpsF NC_009725.1 3902554 3902841 R binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 complement(3902554..3902841) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460098 YP_001423357.1 CDS engD NC_009725.1 3902953 3904053 R translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD complement(3902953..3904053) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460099 YP_001423358.1 CDS yyaE NC_009725.1 3904179 3906182 R conserved hypothetical protein YyaE; hypothetical protein complement(3904179..3906182) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460100 YP_001423359.1 CDS RBAM_038030 NC_009725.1 3906229 3906435 R hypothetical protein complement(3906229..3906435) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461919 YP_001423360.1 CDS yyaD NC_009725.1 3906521 3907525 R conserved hypothetical protein YyaD; hypothetical protein complement(3906521..3907525) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461920 YP_001423361.1 CDS RBAM_038050 NC_009725.1 3907690 3908193 D hypothetical protein 3907690..3908193 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461921 YP_001423362.1 CDS yyaC NC_009725.1 3908368 3908982 D conserved hypothetical protein YyaC; hypothetical protein 3908368..3908982 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461922 YP_001423363.1 CDS spo0J NC_009725.1 3909011 3909862 R stage 0 sporulation protein J (Spo0J); hypothetical protein complement(3909011..3909862) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461923 YP_001423364.1 CDS soj NC_009725.1 3909855 3910616 R sporulation initiation inhibitor protein Soj; hypothetical protein complement(3909855..3910616) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461924 YP_001423365.1 CDS yyaA NC_009725.1 3910915 3911766 R conserved hypothetical protein YyaA; hypothetical protein complement(3910915..3911766) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461925 YP_001423366.1 CDS gidB NC_009725.1 3911888 3912607 R glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB complement(3911888..3912607) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463292 YP_001423367.1 CDS gidA NC_009725.1 3912621 3914507 R GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA complement(3912621..3914507) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463293 YP_001423368.1 CDS trmE NC_009725.1 3914524 3915903 R in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE complement(3914524..3915903) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463294 YP_001423369.1 CDS jag NC_009725.1 3916192 3916833 R spoIIIJ-associated proteinJag; hypothetical protein complement(3916192..3916833) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463295 YP_001423370.1 CDS spoIIIJ NC_009725.1 3916830 3917609 R involved in biogenesis of membrane proteins; Firmicutes specific proteins are shorter than other bacterial counterparts and have a signal peptide and lipid attachment site; necessary for sporulation; OxaA-like protein precursor complement(3916830..3917609) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463296 YP_001423371.1 CDS rnpA NC_009725.1 3917740 3918090 R protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P complement(3917740..3918090) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463297 YP_001423372.1 CDS rpmH NC_009725.1 3918244 3918378 R in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 complement(3918244..3918378) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463298 RBAM_000180 tRNA RBAM_000180 NC_009725.1 23312 23406 D tRNA-Ser 23312..23406 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460160 RBAM_000730 tRNA RBAM_000730 NC_009725.1 70870 70948 D tRNA-Met 70870..70948 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462212 RBAM_000740 tRNA RBAM_000740 NC_009725.1 70956 71032 D tRNA-Glu 70956..71032 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460848 RBAM_000960 tRNA RBAM_000960 NC_009725.1 96083 96160 D tRNA-Val 96083..96160 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461978 RBAM_000970 tRNA RBAM_000970 NC_009725.1 96164 96241 D tRNA-Thr 96164..96241 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461979 RBAM_000980 tRNA RBAM_000980 NC_009725.1 96276 96353 D tRNA-Lys 96276..96353 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462260 RBAM_000990 tRNA RBAM_000990 NC_009725.1 96358 96444 D tRNA-Leu 96358..96444 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462261 RBAM_001000 tRNA RBAM_001000 NC_009725.1 96464 96540 D tRNA-Gly 96464..96540 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462262 RBAM_001010 tRNA RBAM_001010 NC_009725.1 96553 96643 D tRNA-Leu 96553..96643 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461324 RBAM_001020 tRNA RBAM_001020 NC_009725.1 96650 96728 D tRNA-Arg 96650..96728 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461325 RBAM_001030 tRNA RBAM_001030 NC_009725.1 96743 96821 D tRNA-Pro 96743..96821 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461975 RBAM_001040 tRNA RBAM_001040 NC_009725.1 96824 96901 D tRNA-Ala 96824..96901 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461976 RBAM_001870 tRNA RBAM_001870 NC_009725.1 166580 166656 D tRNA-Asn 166580..166656 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460280 RBAM_001880 tRNA RBAM_001880 NC_009725.1 166657 166734 D tRNA-Thr 166657..166734 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460281 RBAM_001890 tRNA RBAM_001890 NC_009725.1 167072 167148 D tRNA-Gly 167072..167148 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463072 RBAM_001900 tRNA RBAM_001900 NC_009725.1 167179 167255 D tRNA-Arg 167179..167255 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463073 RBAM_001940 tRNA RBAM_001940 NC_009725.1 167272 167350 D tRNA-Pro 167272..167350 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463074 RBAM_001950 tRNA RBAM_001950 NC_009725.1 167353 167426 D tRNA-Ala 167353..167426 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462384 RBAM_t01 tRNA RBAM_t01 NC_009725.1 168279 168355 D tRNA-Ile 168279..168355 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5542081 RBAM_001970 tRNA RBAM_001970 NC_009725.1 168370 168447 D tRNA-Ala 168370..168447 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461141 RBAM_002210 tRNA RBAM_002210 NC_009725.1 198063 198136 D tRNA-Glu 198063..198136 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462445 RBAM_002220 tRNA RBAM_002220 NC_009725.1 198138 198215 D tRNA-Val 198138..198215 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463047 RBAM_002230 tRNA RBAM_002230 NC_009725.1 198219 198296 D tRNA-Thr 198219..198296 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463048 RBAM_002240 tRNA RBAM_002240 NC_009725.1 198311 198397 D tRNA-Tyr 198311..198397 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463049 RBAM_002250 tRNA RBAM_002250 NC_009725.1 198400 198478 D tRNA-Gln 198400..198478 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460202 RBAM_005120 tRNA RBAM_005120 NC_009725.1 501647 501723 D tRNA-Asn 501647..501723 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460225 RBAM_005130 tRNA RBAM_005130 NC_009725.1 501725 501817 D tRNA-Ser 501725..501817 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460226 RBAM_005140 tRNA RBAM_005140 NC_009725.1 501835 501911 D tRNA-Glu 501835..501911 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460227 RBAM_005150 tRNA RBAM_005150 NC_009725.1 501921 501997 D tRNA-Gln 501921..501997 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462471 RBAM_005160 tRNA RBAM_005160 NC_009725.1 502029 502106 D tRNA-Lys 502029..502106 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462472 RBAM_005170 tRNA RBAM_005170 NC_009725.1 502113 502196 D tRNA-Leu 502113..502196 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462473 RBAM_005180 tRNA RBAM_005180 NC_009725.1 502263 502348 D tRNA-Leu 502263..502348 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460678 RBAM_006280 tRNA RBAM_006280 NC_009725.1 604799 604877 D tRNA-Arg 604799..604877 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461489 RBAM_006290 tRNA RBAM_006290 NC_009725.1 604884 604959 D tRNA-Gly 604884..604959 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461490 RBAM_006330 tRNA RBAM_006330 NC_009725.1 609896 609974 D tRNA-Met 609896..609974 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463025 RBAM_006340 tRNA RBAM_006340 NC_009725.1 609983 610061 D tRNA-Asp 609983..610061 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463026 RBAM_008880 tRNA RBAM_008880 NC_009725.1 881058 881134 D tRNA-Asn 881058..881134 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462712 RBAM_008890 tRNA RBAM_008890 NC_009725.1 881139 881230 D tRNA-Ser 881139..881230 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461672 RBAM_008900 tRNA RBAM_008900 NC_009725.1 881265 881338 D tRNA-Glu 881265..881338 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461673 RBAM_008910 tRNA RBAM_008910 NC_009725.1 881347 881424 D tRNA-Val 881347..881424 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461674 RBAM_008920 tRNA RBAM_008920 NC_009725.1 881430 881508 D tRNA-Met 881430..881508 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460483 RBAM_008930 tRNA RBAM_008930 NC_009725.1 881514 881592 D tRNA-Asp 881514..881592 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460484 RBAM_008940 tRNA RBAM_008940 NC_009725.1 881601 881678 D tRNA-Phe 881601..881678 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461841 RBAM_008950 tRNA RBAM_008950 NC_009725.1 881680 881754 D tRNA-Thr 881680..881754 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461842 RBAM_008960 tRNA RBAM_008960 NC_009725.1 881764 881850 D tRNA-Tyr 881764..881850 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461843 RBAM_008970 tRNA RBAM_008970 NC_009725.1 881859 881934 D tRNA-Trp 881859..881934 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459739 RBAM_008980 tRNA RBAM_008980 NC_009725.1 881962 882039 D tRNA-His 881962..882039 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459740 RBAM_008990 tRNA RBAM_008990 NC_009725.1 882047 882120 D tRNA-Gln 882047..882120 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460690 RBAM_009000 tRNA RBAM_009000 NC_009725.1 882172 882248 D tRNA-Gly 882172..882248 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460691 RBAM_009010 tRNA RBAM_009010 NC_009725.1 882253 882325 D tRNA-Cys 882253..882325 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460692 RBAM_009020 tRNA RBAM_009020 NC_009725.1 882331 882421 D tRNA-Leu 882331..882421 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459636 RBAM_009030 tRNA RBAM_009030 NC_009725.1 882665 882751 D tRNA-Leu 882665..882751 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459637 RBAM_009170 tRNA RBAM_009170 NC_009725.1 897337 897412 D tRNA-Gly 897337..897412 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460505 RBAM_011950 tRNA RBAM_011950 NC_009725.1 1164134 1164211 D tRNA-Val 1164134..1164211 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463233 RBAM_018510 tRNA RBAM_018510 NC_009725.1 1974357 1974429 R tRNA-Arg complement(1974357..1974429) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459902 RBAM_023090 tRNA RBAM_023090 NC_009725.1 2436822 2436897 D tRNA-Gln 2436822..2436897 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462863 RBAM_025400 tRNA RBAM_025400 NC_009725.1 2663131 2663205 R tRNA-Arg complement(2663131..2663205) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459573 RBAM_025410 tRNA RBAM_025410 NC_009725.1 2663332 2663403 R tRNA-Arg complement(2663332..2663403) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459574 RBAM_027840 tRNA RBAM_027840 NC_009725.1 2920727 2920798 R tRNA-Glu complement(2920727..2920798) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463153 RBAM_027850 tRNA RBAM_027850 NC_009725.1 2920802 2920892 R tRNA-Ser complement(2920802..2920892) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463144 RBAM_027860 tRNA RBAM_027860 NC_009725.1 2920896 2920970 R tRNA-Asn complement(2920896..2920970) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463145 RBAM_027870 tRNA RBAM_027870 NC_009725.1 2920981 2921057 R tRNA-Ile complement(2920981..2921057) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463146 RBAM_027880 tRNA RBAM_027880 NC_009725.1 2921073 2921146 R tRNA-Gly complement(2921073..2921146) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463141 RBAM_027890 tRNA RBAM_027890 NC_009725.1 2921155 2921230 R tRNA-His complement(2921155..2921230) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463142 RBAM_027900 tRNA RBAM_027900 NC_009725.1 2921251 2921326 R tRNA-Phe complement(2921251..2921326) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463143 RBAM_027910 tRNA RBAM_027910 NC_009725.1 2921337 2921413 R tRNA-Asp complement(2921337..2921413) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463138 RBAM_027920 tRNA RBAM_027920 NC_009725.1 2921420 2921496 R tRNA-Met complement(2921420..2921496) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463139 RBAM_027930 tRNA RBAM_027930 NC_009725.1 2921516 2921605 R tRNA-Ser complement(2921516..2921605) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463140 RBAM_027940 tRNA RBAM_027940 NC_009725.1 2921616 2921692 R tRNA-Met complement(2921616..2921692) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463135 RBAM_027950 tRNA RBAM_027950 NC_009725.1 2921695 2921771 R tRNA-Met complement(2921695..2921771) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463136 RBAM_027960 tRNA RBAM_027960 NC_009725.1 2921792 2921864 R tRNA-Ala complement(2921792..2921864) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463137 RBAM_027970 tRNA RBAM_027970 NC_009725.1 2921869 2921945 R tRNA-Pro complement(2921869..2921945) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463132 RBAM_027980 tRNA RBAM_027980 NC_009725.1 2921963 2922039 R tRNA-Arg complement(2921963..2922039) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463133 RBAM_027990 tRNA RBAM_027990 NC_009725.1 2922049 2922134 R tRNA-Leu complement(2922049..2922134) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463134 RBAM_028000 tRNA RBAM_028000 NC_009725.1 2922154 2922228 R tRNA-Gly complement(2922154..2922228) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463129 RBAM_028010 tRNA RBAM_028010 NC_009725.1 2922235 2922321 R tRNA-Leu complement(2922235..2922321) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463130 RBAM_028020 tRNA RBAM_028020 NC_009725.1 2922332 2922407 R tRNA-Lys complement(2922332..2922407) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463131 RBAM_028030 tRNA RBAM_028030 NC_009725.1 2922445 2922520 R tRNA-Thr complement(2922445..2922520) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463202 RBAM_028040 tRNA RBAM_028040 NC_009725.1 2922550 2922625 R tRNA-Val complement(2922550..2922625) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463203 RBAM_028070 tRNA RBAM_028070 NC_009725.1 2925827 2925902 R tRNA-Ala complement(2925827..2925902) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463199 RBAM_028080 tRNA RBAM_028080 NC_009725.1 2925919 2925995 R tRNA-Ile complement(2925919..2925995) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463200 RBAM_028240 tRNA RBAM_028240 NC_009725.1 2940721 2940796 R tRNA-Ala complement(2940721..2940796) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463163 RBAM_031810 tRNA RBAM_031810 NC_009725.1 3296208 3296283 R tRNA-Arg complement(3296208..3296283) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462281 RBAM_037410 tRNA RBAM_037410 NC_009725.1 3852375 3852447 R tRNA-Phe complement(3852375..3852447) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462192 RBAM_037420 tRNA RBAM_037420 NC_009725.1 3852484 3852560 R tRNA-Asp complement(3852484..3852560) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462193 RBAM_037430 tRNA RBAM_037430 NC_009725.1 3852645 3852716 R tRNA-Glu complement(3852645..3852716) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460680 RBAM_037440 tRNA RBAM_037440 NC_009725.1 3852725 3852800 R tRNA-Lys complement(3852725..3852800) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460681 RBAM_000080 rRNA RBAM_000080 NC_009725.1 9760 11314 D 16S ribosomal RNA 9760..11314 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461734 RBAM_000090 rRNA RBAM_000090 NC_009725.1 11486 14418 D 23S ribosomal RNA 11486..14418 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461735 RBAM_000100 rRNA RBAM_000100 NC_009725.1 14466 14579 D 5S ribosomal RNA 14466..14579 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461736 RBAM_000300 rRNA RBAM_000300 NC_009725.1 31318 32872 D 16S ribosomal RNA 31318..32872 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459713 RBAM_000310 rRNA RBAM_000310 NC_009725.1 33050 35982 D 23S ribosomal RNA 33050..35982 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459619 RBAM_000320 rRNA RBAM_000320 NC_009725.1 36032 36145 D 5S ribosomal RNA 36032..36145 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5459620 RBAM_000930 rRNA RBAM_000930 NC_009725.1 91180 92734 D 16S ribosomal RNA 91180..92734 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460181 RBAM_000940 rRNA RBAM_000940 NC_009725.1 92964 95893 D 23S ribosomal RNA 92964..95893 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460182 RBAM_000950 rRNA RBAM_000950 NC_009725.1 95944 96057 D 5S ribosomal RNA 95944..96057 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460183 RBAM_001050 rRNA RBAM_001050 NC_009725.1 97065 98619 D 16S ribosomal RNA 97065..98619 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461977 RBAM_001060 rRNA RBAM_001060 NC_009725.1 98849 101781 D 23S ribosomal RNA 98849..101781 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460210 RBAM_001070 rRNA RBAM_001070 NC_009725.1 101829 101943 D 5S ribosomal RNA 101829..101943 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460211 RBAM_001840 rRNA RBAM_001840 NC_009725.1 161712 163266 D 16S ribosomal RNA 161712..163266 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460236 RBAM_001850 rRNA RBAM_001850 NC_009725.1 163438 166370 D 23S ribosomal RNA 163438..166370 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460237 RBAM_001860 rRNA RBAM_001860 NC_009725.1 166418 166531 D 5S ribosomal RNA 166418..166531 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5460279 RBAM_001960 rRNA RBAM_001960 NC_009725.1 167427 168182 D 16S ribosomal RNA 167427..168182 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462385 RBAM_001980 rRNA RBAM_001980 NC_009725.1 168528 171457 D 23S ribosomal RNA 168528..171457 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461142 RBAM_001990 rRNA RBAM_001990 NC_009725.1 171508 171621 D 5S ribosomal RNA 171508..171621 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5461143 RBAM_002000 rRNA RBAM_002000 NC_009725.1 171984 173538 D 16S ribosomal RNA 171984..173538 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462706 RBAM_002010 rRNA RBAM_002010 NC_009725.1 173710 176640 D 23S ribosomal RNA 173710..176640 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462707 RBAM_002020 rRNA RBAM_002020 NC_009725.1 176690 176803 D 5S ribosomal RNA 176690..176803 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462708 RBAM_006300 rRNA RBAM_006300 NC_009725.1 605054 606608 D 16S ribosomal RNA 605054..606608 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462201 RBAM_006310 rRNA RBAM_006310 NC_009725.1 606782 609711 D 23S ribosomal RNA 606782..609711 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462202 RBAM_006320 rRNA RBAM_006320 NC_009725.1 609764 609878 D 5S ribosomal RNA 609764..609878 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463024 RBAM_008850 rRNA RBAM_008850 NC_009725.1 876175 877729 D 16S ribosomal RNA 876175..877729 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462709 RBAM_008860 rRNA RBAM_008860 NC_009725.1 877903 880832 D 23S ribosomal RNA 877903..880832 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462710 RBAM_008870 rRNA RBAM_008870 NC_009725.1 880933 881046 D 5S ribosomal RNA 880933..881046 Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5462711 RBAM_028050 rRNA RBAM_028050 NC_009725.1 2922653 2922764 R 5S ribosomal RNA complement(2922653..2922764) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463204 RBAM_028060 rRNA RBAM_028060 NC_009725.1 2922817 2925745 R 23S ribosomal RNA complement(2922817..2925745) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463198 RBAM_028090 rRNA RBAM_028090 NC_009725.1 2926092 2927644 R 16S ribosomal RNA complement(2926092..2927644) Bacillus amyloliquefaciens subsp. plantarum str. FZB42 5463201