-- dump date 20240506_013229 -- class Genbank::Contig -- table contig_comment -- id comment NZ_CP007034.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP007034.1.REFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029REFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at theREFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ)REFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de)REFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu)REFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGIREFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGIREFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaeaREFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177REFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: JapanREFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1REFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660REFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free livingREFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobeREFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976REFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976 assembly :: ALLPATHS v. R41043; Velvet v. 1.1.05;REFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976 assembly :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPSREFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976 assembly :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS environment :: Host; BirdREFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976 assembly :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS environment :: Host; Bird sequencing_meth :: WGSREFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976 assembly :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS environment :: Host; Bird sequencing_meth :: WGS GOLD Stamp ID :: Gi04005REFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976 assembly :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS environment :: Host; Bird sequencing_meth :: WGS GOLD Stamp ID :: Gi04005 Current Finishing Status :: Level 6: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976 assembly :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS environment :: Host; Bird sequencing_meth :: WGS GOLD Stamp ID :: Gi04005 Current Finishing Status :: Level 6: Finished Type Strain :: YesREFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976 assembly :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS environment :: Host; Bird sequencing_meth :: WGS GOLD Stamp ID :: Gi04005 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-GEBA 2009REFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976 assembly :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS environment :: Host; Bird sequencing_meth :: WGS GOLD Stamp ID :: Gi04005 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: Chicken caecumREFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976 assembly :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS environment :: Host; Bird sequencing_meth :: WGS GOLD Stamp ID :: Gi04005 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: Chicken caecum Host Name :: ChickenREFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976 assembly :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS environment :: Host; Bird sequencing_meth :: WGS GOLD Stamp ID :: Gi04005 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: Chicken caecum Host Name :: Chicken Cell Shape :: Rod-shapedREFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976 assembly :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS environment :: Host; Bird sequencing_meth :: WGS GOLD Stamp ID :: Gi04005 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: Chicken caecum Host Name :: Chicken Cell Shape :: Rod-shaped Motility :: NonmotileREFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976 assembly :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS environment :: Host; Bird sequencing_meth :: WGS GOLD Stamp ID :: Gi04005 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: Chicken caecum Host Name :: Chicken Cell Shape :: Rod-shaped Motility :: Nonmotile Sporulation :: NonsporulatingREFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976 assembly :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS environment :: Host; Bird sequencing_meth :: WGS GOLD Stamp ID :: Gi04005 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: Chicken caecum Host Name :: Chicken Cell Shape :: Rod-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: MesophileREFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976 assembly :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS environment :: Host; Bird sequencing_meth :: WGS GOLD Stamp ID :: Gi04005 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: Chicken caecum Host Name :: Chicken Cell Shape :: Rod-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Gram Staining :: Gram-REFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976 assembly :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS environment :: Host; Bird sequencing_meth :: WGS GOLD Stamp ID :: Gi04005 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: Chicken caecum Host Name :: Chicken Cell Shape :: Rod-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: NoneREFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976 assembly :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS environment :: Host; Bird sequencing_meth :: WGS GOLD Stamp ID :: Gi04005 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: Chicken caecum Host Name :: Chicken Cell Shape :: Rod-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976 assembly :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS environment :: Host; Bird sequencing_meth :: WGS GOLD Stamp ID :: Gi04005 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: Chicken caecum Host Name :: Chicken Cell Shape :: Rod-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976 assembly :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS environment :: Host; Bird sequencing_meth :: WGS GOLD Stamp ID :: Gi04005 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: Chicken caecum Host Name :: Chicken Cell Shape :: Rod-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976 assembly :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS environment :: Host; Bird sequencing_meth :: WGS GOLD Stamp ID :: Gi04005 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: Chicken caecum Host Name :: Chicken Cell Shape :: Rod-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976 assembly :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS environment :: Host; Bird sequencing_meth :: WGS GOLD Stamp ID :: Gi04005 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: Chicken caecum Host Name :: Chicken Cell Shape :: Rod-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: ALLPATHS v. R41043; Velvet v. 1.1.05;REFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976 assembly :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS environment :: Host; Bird sequencing_meth :: WGS GOLD Stamp ID :: Gi04005 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: Chicken caecum Host Name :: Chicken Cell Shape :: Rod-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPSREFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976 assembly :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS environment :: Host; Bird sequencing_meth :: WGS GOLD Stamp ID :: Gi04005 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: Chicken caecum Host Name :: Chicken Cell Shape :: Rod-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS Genome Coverage :: UnknownREFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976 assembly :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS environment :: Host; Bird sequencing_meth :: WGS GOLD Stamp ID :: Gi04005 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: Chicken caecum Host Name :: Chicken Cell Shape :: Rod-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS Genome Coverage :: Unknown Sequencing Technology :: UnknownREFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976 assembly :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS environment :: Host; Bird sequencing_meth :: WGS GOLD Stamp ID :: Gi04005 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: Chicken caecum Host Name :: Chicken Cell Shape :: Rod-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS Genome Coverage :: Unknown Sequencing Technology :: Unknown ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976 assembly :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS environment :: Host; Bird sequencing_meth :: WGS GOLD Stamp ID :: Gi04005 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: Chicken caecum Host Name :: Chicken Cell Shape :: Rod-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS Genome Coverage :: Unknown Sequencing Technology :: Unknown ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976 assembly :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS environment :: Host; Bird sequencing_meth :: WGS GOLD Stamp ID :: Gi04005 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: Chicken caecum Host Name :: Chicken Cell Shape :: Rod-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS Genome Coverage :: Unknown Sequencing Technology :: Unknown ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976 assembly :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS environment :: Host; Bird sequencing_meth :: WGS GOLD Stamp ID :: Gi04005 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: Chicken caecum Host Name :: Chicken Cell Shape :: Rod-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS Genome Coverage :: Unknown Sequencing Technology :: Unknown ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/20/2023 01:36:36REFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976 assembly :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS environment :: Host; Bird sequencing_meth :: WGS GOLD Stamp ID :: Gi04005 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: Chicken caecum Host Name :: Chicken Cell Shape :: Rod-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS Genome Coverage :: Unknown Sequencing Technology :: Unknown ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/20/2023 01:36:36 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976 assembly :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS environment :: Host; Bird sequencing_meth :: WGS GOLD Stamp ID :: Gi04005 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: Chicken caecum Host Name :: Chicken Cell Shape :: Rod-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS Genome Coverage :: Unknown Sequencing Technology :: Unknown ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/20/2023 01:36:36 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976 assembly :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS environment :: Host; Bird sequencing_meth :: WGS GOLD Stamp ID :: Gi04005 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: Chicken caecum Host Name :: Chicken Cell Shape :: Rod-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS Genome Coverage :: Unknown Sequencing Technology :: Unknown ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/20/2023 01:36:36 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976 assembly :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS environment :: Host; Bird sequencing_meth :: WGS GOLD Stamp ID :: Gi04005 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: Chicken caecum Host Name :: Chicken Cell Shape :: Rod-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS Genome Coverage :: Unknown Sequencing Technology :: Unknown ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/20/2023 01:36:36 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976 assembly :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS environment :: Host; Bird sequencing_meth :: WGS GOLD Stamp ID :: Gi04005 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: Chicken caecum Host Name :: Chicken Cell Shape :: Rod-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS Genome Coverage :: Unknown Sequencing Technology :: Unknown ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/20/2023 01:36:36 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976 assembly :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS environment :: Host; Bird sequencing_meth :: WGS GOLD Stamp ID :: Gi04005 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: Chicken caecum Host Name :: Chicken Cell Shape :: Rod-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS Genome Coverage :: Unknown Sequencing Technology :: Unknown ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/20/2023 01:36:36 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976 assembly :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS environment :: Host; Bird sequencing_meth :: WGS GOLD Stamp ID :: Gi04005 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: Chicken caecum Host Name :: Chicken Cell Shape :: Rod-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS Genome Coverage :: Unknown Sequencing Technology :: Unknown ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/20/2023 01:36:36 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,562REFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976 assembly :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS environment :: Host; Bird sequencing_meth :: WGS GOLD Stamp ID :: Gi04005 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: Chicken caecum Host Name :: Chicken Cell Shape :: Rod-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS Genome Coverage :: Unknown Sequencing Technology :: Unknown ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/20/2023 01:36:36 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,562 CDSs (total) :: 2,483REFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976 assembly :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS environment :: Host; Bird sequencing_meth :: WGS GOLD Stamp ID :: Gi04005 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: Chicken caecum Host Name :: Chicken Cell Shape :: Rod-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS Genome Coverage :: Unknown Sequencing Technology :: Unknown ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/20/2023 01:36:36 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,562 CDSs (total) :: 2,483 Genes (coding) :: 2,461REFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976 assembly :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS environment :: Host; Bird sequencing_meth :: WGS GOLD Stamp ID :: Gi04005 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: Chicken caecum Host Name :: Chicken Cell Shape :: Rod-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS Genome Coverage :: Unknown Sequencing Technology :: Unknown ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/20/2023 01:36:36 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,562 CDSs (total) :: 2,483 Genes (coding) :: 2,461 CDSs (with protein) :: 2,461REFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976 assembly :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS environment :: Host; Bird sequencing_meth :: WGS GOLD Stamp ID :: Gi04005 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: Chicken caecum Host Name :: Chicken Cell Shape :: Rod-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS Genome Coverage :: Unknown Sequencing Technology :: Unknown ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/20/2023 01:36:36 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,562 CDSs (total) :: 2,483 Genes (coding) :: 2,461 CDSs (with protein) :: 2,461 Genes (RNA) :: 79REFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976 assembly :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS environment :: Host; Bird sequencing_meth :: WGS GOLD Stamp ID :: Gi04005 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: Chicken caecum Host Name :: Chicken Cell Shape :: Rod-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS Genome Coverage :: Unknown Sequencing Technology :: Unknown ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/20/2023 01:36:36 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,562 CDSs (total) :: 2,483 Genes (coding) :: 2,461 CDSs (with protein) :: 2,461 Genes (RNA) :: 79 rRNAs :: 5, 5, 5 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976 assembly :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS environment :: Host; Bird sequencing_meth :: WGS GOLD Stamp ID :: Gi04005 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: Chicken caecum Host Name :: Chicken Cell Shape :: Rod-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS Genome Coverage :: Unknown Sequencing Technology :: Unknown ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/20/2023 01:36:36 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,562 CDSs (total) :: 2,483 Genes (coding) :: 2,461 CDSs (with protein) :: 2,461 Genes (RNA) :: 79 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976 assembly :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS environment :: Host; Bird sequencing_meth :: WGS GOLD Stamp ID :: Gi04005 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: Chicken caecum Host Name :: Chicken Cell Shape :: Rod-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS Genome Coverage :: Unknown Sequencing Technology :: Unknown ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/20/2023 01:36:36 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,562 CDSs (total) :: 2,483 Genes (coding) :: 2,461 CDSs (with protein) :: 2,461 Genes (RNA) :: 79 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 62REFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976 assembly :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS environment :: Host; Bird sequencing_meth :: WGS GOLD Stamp ID :: Gi04005 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: Chicken caecum Host Name :: Chicken Cell Shape :: Rod-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS Genome Coverage :: Unknown Sequencing Technology :: Unknown ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/20/2023 01:36:36 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,562 CDSs (total) :: 2,483 Genes (coding) :: 2,461 CDSs (with protein) :: 2,461 Genes (RNA) :: 79 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 62 ncRNAs :: 2REFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976 assembly :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS environment :: Host; Bird sequencing_meth :: WGS GOLD Stamp ID :: Gi04005 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: Chicken caecum Host Name :: Chicken Cell Shape :: Rod-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS Genome Coverage :: Unknown Sequencing Technology :: Unknown ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/20/2023 01:36:36 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,562 CDSs (total) :: 2,483 Genes (coding) :: 2,461 CDSs (with protein) :: 2,461 Genes (RNA) :: 79 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 62 ncRNAs :: 2 Pseudo Genes (total) :: 22REFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976 assembly :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS environment :: Host; Bird sequencing_meth :: WGS GOLD Stamp ID :: Gi04005 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: Chicken caecum Host Name :: Chicken Cell Shape :: Rod-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS Genome Coverage :: Unknown Sequencing Technology :: Unknown ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/20/2023 01:36:36 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,562 CDSs (total) :: 2,483 Genes (coding) :: 2,461 CDSs (with protein) :: 2,461 Genes (RNA) :: 79 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 62 ncRNAs :: 2 Pseudo Genes (total) :: 22 CDSs (without protein) :: 22REFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976 assembly :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS environment :: Host; Bird sequencing_meth :: WGS GOLD Stamp ID :: Gi04005 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: Chicken caecum Host Name :: Chicken Cell Shape :: Rod-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS Genome Coverage :: Unknown Sequencing Technology :: Unknown ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/20/2023 01:36:36 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,562 CDSs (total) :: 2,483 Genes (coding) :: 2,461 CDSs (with protein) :: 2,461 Genes (RNA) :: 79 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 62 ncRNAs :: 2 Pseudo Genes (total) :: 22 CDSs (without protein) :: 22 Pseudo Genes (ambiguous residues) :: 0 of 22REFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976 assembly :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS environment :: Host; Bird sequencing_meth :: WGS GOLD Stamp ID :: Gi04005 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: Chicken caecum Host Name :: Chicken Cell Shape :: Rod-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS Genome Coverage :: Unknown Sequencing Technology :: Unknown ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/20/2023 01:36:36 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,562 CDSs (total) :: 2,483 Genes (coding) :: 2,461 CDSs (with protein) :: 2,461 Genes (RNA) :: 79 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 62 ncRNAs :: 2 Pseudo Genes (total) :: 22 CDSs (without protein) :: 22 Pseudo Genes (ambiguous residues) :: 0 of 22 Pseudo Genes (frameshifted) :: 6 of 22REFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976 assembly :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS environment :: Host; Bird sequencing_meth :: WGS GOLD Stamp ID :: Gi04005 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: Chicken caecum Host Name :: Chicken Cell Shape :: Rod-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS Genome Coverage :: Unknown Sequencing Technology :: Unknown ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/20/2023 01:36:36 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,562 CDSs (total) :: 2,483 Genes (coding) :: 2,461 CDSs (with protein) :: 2,461 Genes (RNA) :: 79 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 62 ncRNAs :: 2 Pseudo Genes (total) :: 22 CDSs (without protein) :: 22 Pseudo Genes (ambiguous residues) :: 0 of 22 Pseudo Genes (frameshifted) :: 6 of 22 Pseudo Genes (incomplete) :: 15 of 22REFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976 assembly :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS environment :: Host; Bird sequencing_meth :: WGS GOLD Stamp ID :: Gi04005 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: Chicken caecum Host Name :: Chicken Cell Shape :: Rod-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS Genome Coverage :: Unknown Sequencing Technology :: Unknown ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/20/2023 01:36:36 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,562 CDSs (total) :: 2,483 Genes (coding) :: 2,461 CDSs (with protein) :: 2,461 Genes (RNA) :: 79 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 62 ncRNAs :: 2 Pseudo Genes (total) :: 22 CDSs (without protein) :: 22 Pseudo Genes (ambiguous residues) :: 0 of 22 Pseudo Genes (frameshifted) :: 6 of 22 Pseudo Genes (incomplete) :: 15 of 22 Pseudo Genes (internal stop) :: 2 of 22REFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976 assembly :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS environment :: Host; Bird sequencing_meth :: WGS GOLD Stamp ID :: Gi04005 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: Chicken caecum Host Name :: Chicken Cell Shape :: Rod-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS Genome Coverage :: Unknown Sequencing Technology :: Unknown ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/20/2023 01:36:36 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,562 CDSs (total) :: 2,483 Genes (coding) :: 2,461 CDSs (with protein) :: 2,461 Genes (RNA) :: 79 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 62 ncRNAs :: 2 Pseudo Genes (total) :: 22 CDSs (without protein) :: 22 Pseudo Genes (ambiguous residues) :: 0 of 22 Pseudo Genes (frameshifted) :: 6 of 22 Pseudo Genes (incomplete) :: 15 of 22 Pseudo Genes (internal stop) :: 2 of 22 Pseudo Genes (multiple problems) :: 1 of 22REFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976 assembly :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS environment :: Host; Bird sequencing_meth :: WGS GOLD Stamp ID :: Gi04005 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: Chicken caecum Host Name :: Chicken Cell Shape :: Rod-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS Genome Coverage :: Unknown Sequencing Technology :: Unknown ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/20/2023 01:36:36 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,562 CDSs (total) :: 2,483 Genes (coding) :: 2,461 CDSs (with protein) :: 2,461 Genes (RNA) :: 79 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 62 ncRNAs :: 2 Pseudo Genes (total) :: 22 CDSs (without protein) :: 22 Pseudo Genes (ambiguous residues) :: 0 of 22 Pseudo Genes (frameshifted) :: 6 of 22 Pseudo Genes (incomplete) :: 15 of 22 Pseudo Genes (internal stop) :: 2 of 22 Pseudo Genes (multiple problems) :: 1 of 22 CRISPR Arrays :: 2REFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976 assembly :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS environment :: Host; Bird sequencing_meth :: WGS GOLD Stamp ID :: Gi04005 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: Chicken caecum Host Name :: Chicken Cell Shape :: Rod-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS Genome Coverage :: Unknown Sequencing Technology :: Unknown ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/20/2023 01:36:36 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,562 CDSs (total) :: 2,483 Genes (coding) :: 2,461 CDSs (with protein) :: 2,461 Genes (RNA) :: 79 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 62 ncRNAs :: 2 Pseudo Genes (total) :: 22 CDSs (without protein) :: 22 Pseudo Genes (ambiguous residues) :: 0 of 22 Pseudo Genes (frameshifted) :: 6 of 22 Pseudo Genes (incomplete) :: 15 of 22 Pseudo Genes (internal stop) :: 2 of 22 Pseudo Genes (multiple problems) :: 1 of 22 CRISPR Arrays :: 2 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP007034.1. URL -- http://www.jgi.doe.gov JGI Project ID: 401029 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan Eisen (jaeisen@ucdavis.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI Annotation by JGI The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Barnesiella viscericola C46, DSM 18177 country :: Japan num_replicons :: 1 ref_biomaterial :: DSM 18177, JCM 13660 biotic_relationship :: Free living rel_to_oxygen :: Obligate anaerobe isol_growth_condt :: 17267976 assembly :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS environment :: Host; Bird sequencing_meth :: WGS GOLD Stamp ID :: Gi04005 Current Finishing Status :: Level 6: Finished Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: Chicken caecum Host Name :: Chicken Cell Shape :: Rod-shaped Motility :: Nonmotile Sporulation :: Nonsporulating Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: ALLPATHS v. R41043; Velvet v. 1.1.05; Phrap v. 4.24 SPS Genome Coverage :: Unknown Sequencing Technology :: Unknown ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/20/2023 01:36:36 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,562 CDSs (total) :: 2,483 Genes (coding) :: 2,461 CDSs (with protein) :: 2,461 Genes (RNA) :: 79 rRNAs :: 5, 5, 5 (5S, 16S, 23S) complete rRNAs :: 5, 5, 5 (5S, 16S, 23S) tRNAs :: 62 ncRNAs :: 2 Pseudo Genes (total) :: 22 CDSs (without protein) :: 22 Pseudo Genes (ambiguous residues) :: 0 of 22 Pseudo Genes (frameshifted) :: 6 of 22 Pseudo Genes (incomplete) :: 15 of 22 Pseudo Genes (internal stop) :: 2 of 22 Pseudo Genes (multiple problems) :: 1 of 22 CRISPR Arrays :: 2 ##Genome-Annotation-Data-END## COMPLETENESS: full length.