-- dump date 20140619_000937 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 634504000001 SEQ_END SEQ_END NC_012846.1 2341328 2341328 DR NC_012846.1; contig end 2341328..2341328 Bartonella grahamii as4aup 634504000002 SEQ_END SEQ_END NC_012847.1 28192 28192 DR NC_012847.1; contig end 28192..28192 Bartonella grahamii as4aup YP_002971071.1 CDS Bgr_00010 NC_012846.1 2 826 D hypothetical protein 2..826 Bartonella grahamii as4aup 7998999 YP_002971072.1 CDS maf1 NC_012846.1 839 1435 D Maf-like protein 839..1435 Bartonella grahamii as4aup 7996978 YP_002971073.1 CDS aroE NC_012846.1 1428 2300 D AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase 1428..2300 Bartonella grahamii as4aup 7996979 YP_002971074.1 CDS coaE NC_012846.1 2297 2881 D catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 2297..2881 Bartonella grahamii as4aup 7996980 YP_002971075.1 CDS dnaQ NC_012846.1 2886 3593 D DNA polymerase III epsilon chain 2886..3593 Bartonella grahamii as4aup 7996981 YP_002971076.1 CDS polA NC_012846.1 3916 6825 D has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I 3916..6825 Bartonella grahamii as4aup 7996982 YP_002971077.1 CDS Bgr_00070 NC_012846.1 6831 7694 R endonuclease/exonuclease/phosphatase family protein complement(6831..7694) Bartonella grahamii as4aup 7996983 YP_002971078.1 CDS Bgr_00080 NC_012846.1 7807 8580 R hypothetical membrane protein complement(7807..8580) Bartonella grahamii as4aup 7996984 YP_002971079.1 CDS lspA NC_012846.1 9697 10200 R lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase complement(9697..10200) Bartonella grahamii as4aup 7996985 YP_002971080.1 CDS Bgr_00100 NC_012846.1 10190 11059 R tRNA/rRNA methyltransferase complement(10190..11059) Bartonella grahamii as4aup 7996986 YP_002971081.1 CDS Bgr_00110 NC_012846.1 11047 11982 R SAM dependent methyltransferase complement(11047..11982) Bartonella grahamii as4aup 7996987 YP_002971082.1 CDS Bgr_00120 NC_012846.1 12154 12450 R hypothetical membrane protein complement(12154..12450) Bartonella grahamii as4aup 7996988 YP_002971083.1 CDS ihfB NC_012846.1 12458 12736 R This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit beta complement(12458..12736) Bartonella grahamii as4aup 7996989 YP_002971084.1 CDS Bgr_00140 NC_012846.1 12921 13565 D hypothetical protein 12921..13565 Bartonella grahamii as4aup 7996990 YP_002971085.1 CDS Bgr_00150 NC_012846.1 13642 14241 D OstA family protein 13642..14241 Bartonella grahamii as4aup 7996991 YP_002971086.1 CDS Bgr_00160 NC_012846.1 14248 15042 D ABC transporter ATP-binding protein 14248..15042 Bartonella grahamii as4aup 7996992 YP_002971087.1 CDS ptsN NC_012846.1 15954 16418 D nitrogen regulatory IIA protein 15954..16418 Bartonella grahamii as4aup 7996993 YP_002971088.1 CDS Bgr_00180 NC_012846.1 18224 18733 D hypothetical protein 18224..18733 Bartonella grahamii as4aup 7996994 YP_002971089.1 CDS Bgr_00190 NC_012846.1 18776 20002 D hypothetical protein 18776..20002 Bartonella grahamii as4aup 7996995 YP_002971090.1 CDS Bgr_00210 NC_012846.1 20499 21146 R amino acid efflux protein, LysE family complement(20499..21146) Bartonella grahamii as4aup 7996997 YP_002971091.1 CDS argG NC_012846.1 21317 22564 D catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 21317..22564 Bartonella grahamii as4aup 7996998 YP_002971092.1 CDS lysK NC_012846.1 22929 24590 D class I; LysRS1; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri this enzyme charges both tRNA molecules for lysine that exist in this organism (but the tRNALysUUU very poorly) and in the presence of LysRS2 can charge tRNAPyl with lysine; lysyl-tRNA synthetase 22929..24590 Bartonella grahamii as4aup 7996999 YP_002971093.1 CDS prfC NC_012846.1 24590 26164 D peptide chain release factor 3 24590..26164 Bartonella grahamii as4aup 7997000 YP_002971094.1 CDS addB NC_012846.1 26895 30014 D double-strand break repair protein AddB 26895..30014 Bartonella grahamii as4aup 7997001 YP_002971095.1 CDS addA NC_012846.1 30017 33493 D double-strand break repair helicase AddA 30017..33493 Bartonella grahamii as4aup 7997002 YP_002971096.1 CDS trxA NC_012846.1 33669 33992 D thioredoxin 33669..33992 Bartonella grahamii as4aup 7997003 YP_002971097.1 CDS Bgr_00280 NC_012846.1 34770 35240 R hypothetical protein complement(34770..35240) Bartonella grahamii as4aup 7997004 YP_002971098.1 CDS Bgr_00290 NC_012846.1 35292 37757 R sensor histidine kinase protein complement(35292..37757) Bartonella grahamii as4aup 7997005 YP_002971099.1 CDS ahcY NC_012846.1 37791 39188 R catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase complement(37791..39188) Bartonella grahamii as4aup 7997006 YP_002971100.1 CDS Bgr_00310 NC_012846.1 39907 40905 R NADH-ubiquinone oxidoreductase complement(39907..40905) Bartonella grahamii as4aup 7997007 YP_002971101.1 CDS folC NC_012846.1 40948 42267 R folylpolyglutamate synthase complement(40948..42267) Bartonella grahamii as4aup 7997008 YP_002971102.1 CDS accD NC_012846.1 42272 43192 R catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta complement(42272..43192) Bartonella grahamii as4aup 7997009 YP_002971103.1 CDS Bgr_00340 NC_012846.1 44110 44829 R putative role in sulfur assimilation; CysZ-like protein complement(44110..44829) Bartonella grahamii as4aup 7997010 YP_002971104.1 CDS dfp NC_012846.1 46712 48133 R catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; in the alphaproteobacteria, this protein contains an N-terminal SbtC-like domain; bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase complement(46712..48133) Bartonella grahamii as4aup 7997011 YP_002971105.1 CDS aarF NC_012846.1 48202 49788 R ubiquinone biosynthesis protein Aarf complement(48202..49788) Bartonella grahamii as4aup 7997012 YP_002971106.1 CDS ubiE NC_012846.1 49791 50573 R Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase complement(49791..50573) Bartonella grahamii as4aup 7997013 YP_002971107.1 CDS gyrB NC_012846.1 50692 53124 R negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B complement(50692..53124) Bartonella grahamii as4aup 7997014 YP_002971108.1 CDS Bgr_00400 NC_012846.1 54640 55545 D amino acid ABC transporter substrate-binding protein 54640..55545 Bartonella grahamii as4aup 7997016 YP_002971109.1 CDS Bgr_00410 NC_012846.1 55557 57089 R Mg chelatase-related protein complement(55557..57089) Bartonella grahamii as4aup 7997017 YP_002971110.1 CDS Bgr_00420 NC_012846.1 57495 59459 D putative outer membrane protein 57495..59459 Bartonella grahamii as4aup 7997018 YP_002971111.1 CDS Bgr_00430 NC_012846.1 59459 64117 D hypothetical protein 59459..64117 Bartonella grahamii as4aup 7997019 YP_002971112.1 CDS msbA NC_012846.1 66227 67999 R ABC transporter ATP-binding protein complement(66227..67999) Bartonella grahamii as4aup 7997022 YP_002971113.1 CDS Bgr_00480 NC_012846.1 69310 70089 D putative hydrolase protein 69310..70089 Bartonella grahamii as4aup 7997024 YP_002971114.1 CDS Bgr_00490 NC_012846.1 70121 70867 D hypothetical protein 70121..70867 Bartonella grahamii as4aup 7997025 YP_002971115.1 CDS dapE NC_012846.1 71091 72263 D dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 71091..72263 Bartonella grahamii as4aup 7997026 YP_002971116.1 CDS hemN NC_012846.1 73887 75086 R catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase complement(73887..75086) Bartonella grahamii as4aup 7997028 YP_002971117.1 CDS Bgr_00530 NC_012846.1 75083 75730 R HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; putative deoxyribonucleotide triphosphate pyrophosphatase complement(75083..75730) Bartonella grahamii as4aup 7997029 YP_002971118.1 CDS hrcA NC_012846.1 76246 77316 D Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor 76246..77316 Bartonella grahamii as4aup 7997030 YP_002971119.1 CDS grpE NC_012846.1 77441 78103 D with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE 77441..78103 Bartonella grahamii as4aup 7997031 YP_002971120.1 CDS Bgr_00560 NC_012846.1 78210 78749 R 2'-5' RNA ligase complement(78210..78749) Bartonella grahamii as4aup 7997032 YP_002971121.1 CDS ptsH NC_012846.1 79376 79669 R phosphocarrier protein complement(79376..79669) Bartonella grahamii as4aup 7997033 YP_002971122.1 CDS Bgr_00580 NC_012846.1 79687 80085 R PTS system component IIA complement(79687..80085) Bartonella grahamii as4aup 7997034 YP_002971123.1 CDS Bgr_00590 NC_012846.1 80220 80684 R hypothetical protein complement(80220..80684) Bartonella grahamii as4aup 7997035 YP_002971124.1 CDS batS NC_012846.1 80708 82492 R two-component sensor histidine kinase BatS complement(80708..82492) Bartonella grahamii as4aup 7997036 YP_002971125.1 CDS batR NC_012846.1 82532 83254 R transcriptional regulator BatR complement(82532..83254) Bartonella grahamii as4aup 7997037 YP_002971126.1 CDS Bgr_00620 NC_012846.1 83641 84096 D LysM domain/BON superfamily protein 83641..84096 Bartonella grahamii as4aup 7997038 YP_002971127.1 CDS Bgr_00630 NC_012846.1 84205 84759 R hypothetical membrane protein complement(84205..84759) Bartonella grahamii as4aup 7997039 YP_002971128.1 CDS dnaK NC_012846.1 85728 87620 D heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 85728..87620 Bartonella grahamii as4aup 7997040 YP_002971129.1 CDS Bgr_00650 NC_012846.1 87777 88919 D chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ 87777..88919 Bartonella grahamii as4aup 7997041 YP_002971130.1 CDS argB NC_012846.1 89760 90665 D catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 89760..90665 Bartonella grahamii as4aup 7997042 YP_002971131.1 CDS Bgr_00670 NC_012846.1 90698 91612 D hypothetical membrane protein 90698..91612 Bartonella grahamii as4aup 7997043 YP_002971132.1 CDS Bgr_00680 NC_012846.1 92871 94676 D binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 92871..94676 Bartonella grahamii as4aup 7997044 YP_002971133.1 CDS dapD NC_012846.1 95161 96009 R catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase complement(95161..96009) Bartonella grahamii as4aup 7997045 YP_002971134.1 CDS Bgr_00700 NC_012846.1 96117 96980 D hypothetical protein 96117..96980 Bartonella grahamii as4aup 7997046 YP_002971135.1 CDS truA NC_012846.1 97013 97756 R mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A complement(97013..97756) Bartonella grahamii as4aup 7997047 YP_002971136.1 CDS fmt NC_012846.1 97758 98687 R methionyl-tRNA formyltransferase complement(97758..98687) Bartonella grahamii as4aup 7997048 YP_002971137.1 CDS def NC_012846.1 98687 99223 R cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase complement(98687..99223) Bartonella grahamii as4aup 7997049 YP_002971138.1 CDS Bgr_00740 NC_012846.1 99314 100495 D RmuC family protein 99314..100495 Bartonella grahamii as4aup 7997050 YP_002971139.1 CDS Bgr_00750 NC_012846.1 100607 101191 D hypothetical protein 100607..101191 Bartonella grahamii as4aup 7997051 YP_002971140.1 CDS Bgr_00770 NC_012846.1 102571 102951 R hypothetical protein complement(102571..102951) Bartonella grahamii as4aup 7997053 YP_002971141.1 CDS aroA NC_012846.1 103139 104467 D catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 103139..104467 Bartonella grahamii as4aup 7997054 YP_002971142.1 CDS cmk NC_012846.1 104464 105111 D Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase 104464..105111 Bartonella grahamii as4aup 7997055 YP_002971143.1 CDS rpsA NC_012846.1 105243 106943 D in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 105243..106943 Bartonella grahamii as4aup 7997056 YP_002971144.1 CDS Bgr_00810 NC_012846.1 107172 115742 D cyclic beta 1-2 glucan synthetase 107172..115742 Bartonella grahamii as4aup 7997057 YP_002971145.1 CDS pncB NC_012846.1 115875 117179 D catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 115875..117179 Bartonella grahamii as4aup 7997058 YP_002971146.1 CDS Bgr_00830 NC_012846.1 117678 117875 R hypothetical protein complement(117678..117875) Bartonella grahamii as4aup 7997059 YP_002971147.1 CDS Bgr_00840 NC_012846.1 118299 118685 R hypothetical membrane protein complement(118299..118685) Bartonella grahamii as4aup 7997060 YP_002971148.1 CDS yfeD NC_012846.1 119096 120001 R iron transport system membrane protein YfeD complement(119096..120001) Bartonella grahamii as4aup 7997061 YP_002971149.1 CDS yfeC NC_012846.1 119998 120864 R iron transport system membrane protein yfeC complement(119998..120864) Bartonella grahamii as4aup 7997062 YP_002971150.1 CDS yfeB NC_012846.1 120861 121691 R iron transport protein YfeB complement(120861..121691) Bartonella grahamii as4aup 7997063 YP_002971151.1 CDS yfeA NC_012846.1 121688 122596 R iron transport protein YfeA complement(121688..122596) Bartonella grahamii as4aup 7997064 YP_002971152.1 CDS pheT NC_012846.1 122888 125302 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta complement(122888..125302) Bartonella grahamii as4aup 7997065 YP_002971153.1 CDS pheS NC_012846.1 125335 126417 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha complement(125335..126417) Bartonella grahamii as4aup 7997066 YP_002971154.1 CDS rplT NC_012846.1 126512 126913 R binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 complement(126512..126913) Bartonella grahamii as4aup 7997067 YP_002971155.1 CDS rpmI NC_012846.1 126947 127150 R 50S ribosomal protein L35 complement(126947..127150) Bartonella grahamii as4aup 7997068 YP_002971156.1 CDS nth NC_012846.1 127305 128045 R endonuclease III complement(127305..128045) Bartonella grahamii as4aup 7997069 YP_002971157.1 CDS ibpA1 NC_012846.1 128166 128597 D heat shock protein 128166..128597 Bartonella grahamii as4aup 7997070 YP_002971158.1 CDS Bgr_00950 NC_012846.1 128624 128875 D hypothetical protein 128624..128875 Bartonella grahamii as4aup 7997071 YP_002971159.1 CDS ilvD NC_012846.1 129719 131557 D catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 129719..131557 Bartonella grahamii as4aup 7997073 YP_002971160.1 CDS mutS NC_012846.1 132618 135362 R This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS complement(132618..135362) Bartonella grahamii as4aup 7997074 YP_002971161.1 CDS maeB1 NC_012846.1 135558 137858 D NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme 135558..137858 Bartonella grahamii as4aup 7997075 YP_002971162.1 CDS secB NC_012846.1 137926 138402 R molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB complement(137926..138402) Bartonella grahamii as4aup 7997076 YP_002971163.1 CDS Bgr_01010 NC_012846.1 138545 139039 R FxsA cytoplasmic membrane protein complement(138545..139039) Bartonella grahamii as4aup 7997077 YP_002971164.1 CDS Bgr_01020 NC_012846.1 139212 139904 D putative translocase transmembrane protein 139212..139904 Bartonella grahamii as4aup 7997078 YP_002971165.1 CDS Bgr_01030 NC_012846.1 139957 140547 D Smr family protein 139957..140547 Bartonella grahamii as4aup 7997079 YP_002971166.1 CDS Bgr_01050 NC_012846.1 141449 141982 R GcrA cell cycle regulator complement(141449..141982) Bartonella grahamii as4aup 7997081 YP_002971167.1 CDS argD NC_012846.1 142468 143682 D DapATase; functions in arginine biosynthetic pathway; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine transaminase protein 142468..143682 Bartonella grahamii as4aup 7997082 YP_002971168.1 CDS argF NC_012846.1 143679 144614 D catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 143679..144614 Bartonella grahamii as4aup 7997083 YP_002971169.1 CDS hslO NC_012846.1 144651 145637 D becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers; Hsp33-like chaperonin 144651..145637 Bartonella grahamii as4aup 7997084 YP_002971170.1 CDS Bgr_01090 NC_012846.1 146755 147348 R thiol: disulfide interchange protein complement(146755..147348) Bartonella grahamii as4aup 7997085 YP_002971171.1 CDS Bgr_01100 NC_012846.1 147323 147574 R hypothetical protein complement(147323..147574) Bartonella grahamii as4aup 7997086 YP_002971172.1 CDS ccmC NC_012846.1 147562 148341 R heme exporter protein CcmC complement(147562..148341) Bartonella grahamii as4aup 7997087 YP_002971173.1 CDS ccmB NC_012846.1 148388 149053 R heme exporter protein CcmB complement(148388..149053) Bartonella grahamii as4aup 7997088 YP_002971174.1 CDS ccmA NC_012846.1 149065 149676 R ATP-binding protein; required for proper cytochrome c maturation; cytochrome c biogenesis protein CcmA complement(149065..149676) Bartonella grahamii as4aup 7997089 YP_002971175.1 CDS acnA NC_012846.1 149974 152661 D Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 149974..152661 Bartonella grahamii as4aup 7997090 YP_002971176.1 CDS rpsT NC_012846.1 152899 153165 D binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 152899..153165 Bartonella grahamii as4aup 7997091 YP_002971177.1 CDS dnaA NC_012846.1 153867 155438 D binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 153867..155438 Bartonella grahamii as4aup 7997092 YP_002971178.1 CDS dnaN NC_012846.1 155624 156745 D binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 155624..156745 Bartonella grahamii as4aup 7997093 YP_002971179.1 CDS recF NC_012846.1 156766 157899 D Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F 156766..157899 Bartonella grahamii as4aup 7997094 YP_002971180.1 CDS aroQ NC_012846.1 157954 158406 D catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 157954..158406 Bartonella grahamii as4aup 7997095 YP_002971181.1 CDS cyoA NC_012846.1 158539 159510 D cytochrome o ubiquinol oxidase subunit II 158539..159510 Bartonella grahamii as4aup 7997096 YP_002971182.1 CDS cyoB NC_012846.1 159586 161604 D cytochrome o ubiquinol oxidase subunit I 159586..161604 Bartonella grahamii as4aup 7997097 YP_002971183.1 CDS cyoC NC_012846.1 161601 162269 D cytochrome o ubiquinol oxidase subunit III 161601..162269 Bartonella grahamii as4aup 7997098 YP_002971184.1 CDS cyoD NC_012846.1 162269 162817 D cytochrome o ubiquinol oxidase subunit IV 162269..162817 Bartonella grahamii as4aup 7997099 YP_002971185.1 CDS gpsA NC_012846.1 163222 164229 D catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 163222..164229 Bartonella grahamii as4aup 7997100 YP_002971186.1 CDS fabI1 NC_012846.1 166132 166950 R Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-(acyl carrier protein) reductase complement(166132..166950) Bartonella grahamii as4aup 7997103 YP_002971187.1 CDS fabB NC_012846.1 166999 168219 R FabB, beta-Ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase I complement(166999..168219) Bartonella grahamii as4aup 7997104 YP_002971188.1 CDS fabA NC_012846.1 168277 168786 R catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP; 3-hydroxydecanoyl-(acyl carrier protein) dehydratase complement(168277..168786) Bartonella grahamii as4aup 7997105 YP_002971189.1 CDS fur1 NC_012846.1 169018 169533 D ferric uptake regulator 169018..169533 Bartonella grahamii as4aup 7997106 YP_002971190.1 CDS Bgr_01310 NC_012846.1 169580 170140 R SH3 domain; hypothetical protein complement(169580..170140) Bartonella grahamii as4aup 7997107 YP_002971191.1 CDS rpsU NC_012846.1 171761 171994 R a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 complement(171761..171994) Bartonella grahamii as4aup 7997108 YP_002971192.1 CDS fhs NC_012846.1 172181 173854 R formate-tetrahydrofolate ligase complement(172181..173854) Bartonella grahamii as4aup 7997109 YP_002971193.1 CDS Bgr_01350 NC_012846.1 174977 176116 D HlyD family secretion protein 174977..176116 Bartonella grahamii as4aup 7997111 YP_002971194.1 CDS acrD NC_012846.1 176113 179247 D acriflavin resistance protein D 176113..179247 Bartonella grahamii as4aup 7997112 YP_002971195.1 CDS pgi NC_012846.1 179447 181111 D functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 179447..181111 Bartonella grahamii as4aup 7997113 YP_002971196.1 CDS rplU NC_012846.1 181802 182281 D 50S ribosomal protein L21 181802..182281 Bartonella grahamii as4aup 7997115 YP_002971197.1 CDS rpmA NC_012846.1 182294 182563 D involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 182294..182563 Bartonella grahamii as4aup 7997116 YP_002971198.1 CDS fruB NC_012846.1 184001 186505 D multiphosphoryl transfer protein FruB 184001..186505 Bartonella grahamii as4aup 7997117 YP_002971199.1 CDS Bgr_01430 NC_012846.1 187532 188731 R putative integral membrane protein complement(187532..188731) Bartonella grahamii as4aup 7997119 YP_002971200.1 CDS Bgr_01470 NC_012846.1 195246 196457 D major facilitator family transporter 195246..196457 Bartonella grahamii as4aup 7997123 YP_002971201.1 CDS Bgr_01480 NC_012846.1 196778 197047 R hypothetical protein complement(196778..197047) Bartonella grahamii as4aup 7997124 YP_002971202.1 CDS Bgr_01490 NC_012846.1 197028 197495 R hypothetical protein complement(197028..197495) Bartonella grahamii as4aup 7997125 YP_002971203.1 CDS Bgr_01510 NC_012846.1 197998 198501 D transcriptional regulator 197998..198501 Bartonella grahamii as4aup 7997127 YP_002971204.1 CDS badA1 NC_012846.1 199365 206174 D surface protein/adhesin 199365..206174 Bartonella grahamii as4aup 7997128 YP_002971205.1 CDS badA2 NC_012846.1 206775 212900 D surface protein/adhesin 206775..212900 Bartonella grahamii as4aup 7997129 YP_002971206.1 CDS badA3 NC_012846.1 217371 222728 D surface protein/adhesin 217371..222728 Bartonella grahamii as4aup 7997131 YP_002971207.1 CDS badA4 NC_012846.1 223610 235978 D surface protein/adhesin 223610..235978 Bartonella grahamii as4aup 7997133 YP_002971208.1 CDS badA5 NC_012846.1 238007 247483 D surface protein/adhesin 238007..247483 Bartonella grahamii as4aup 7997137 YP_002971209.1 CDS Bgr_01620 NC_012846.1 247495 248082 D invasion associated locus B family protein 247495..248082 Bartonella grahamii as4aup 7997138 YP_002971210.1 CDS ppx NC_012846.1 249016 250326 D exopolyphosphatase 249016..250326 Bartonella grahamii as4aup 7997139 YP_002971211.1 CDS ftsJ NC_012846.1 250356 251084 D cell division protein FtsJ 250356..251084 Bartonella grahamii as4aup 7997140 YP_002971212.1 CDS obgE NC_012846.1 251258 252283 D essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 251258..252283 Bartonella grahamii as4aup 7997141 YP_002971213.1 CDS proB NC_012846.1 252285 253424 D catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 252285..253424 Bartonella grahamii as4aup 7997142 YP_002971214.1 CDS proA NC_012846.1 253488 254726 D Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 253488..254726 Bartonella grahamii as4aup 7997143 YP_002971215.1 CDS nadD NC_012846.1 254756 255349 D transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria; nicotinic acid mononucleotide adenylyltransferase 254756..255349 Bartonella grahamii as4aup 7997144 YP_002971216.1 CDS Bgr_01690 NC_012846.1 255403 255846 D iojap-like protein 255403..255846 Bartonella grahamii as4aup 7997145 YP_002971217.1 CDS Bgr_01700 NC_012846.1 255848 256330 D SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 255848..256330 Bartonella grahamii as4aup 7997146 YP_002971218.1 CDS filA NC_012846.1 256427 257707 D filament-A percursor 256427..257707 Bartonella grahamii as4aup 7997147 YP_002971219.1 CDS ctpA NC_012846.1 257697 259007 D carboxy-terminal protease 257697..259007 Bartonella grahamii as4aup 7997148 YP_002971220.1 CDS invA NC_012846.1 259047 259568 D hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase 259047..259568 Bartonella grahamii as4aup 7997149 YP_002971221.1 CDS invB NC_012846.1 259668 260228 D invasion-associated protein B 259668..260228 Bartonella grahamii as4aup 7997150 YP_002971222.1 CDS Bgr_01750 NC_012846.1 260556 260849 D hypothetical membrane protein, YGGT family 260556..260849 Bartonella grahamii as4aup 7997151 YP_002971223.1 CDS Bgr_01760 NC_012846.1 260872 261186 D hypothetical protein 260872..261186 Bartonella grahamii as4aup 7997152 YP_002971224.1 CDS ppa NC_012846.1 261257 261787 R catalyzes the hydrolysis of pyrophosphate to phosphate; inorganic pyrophosphatase complement(261257..261787) Bartonella grahamii as4aup 7997153 YP_002971225.1 CDS typA NC_012846.1 261856 263682 R GTP-binding protein TypA complement(261856..263682) Bartonella grahamii as4aup 7997154 YP_002971226.1 CDS mgtE NC_012846.1 264952 266328 R Mg2+ transport protein complement(264952..266328) Bartonella grahamii as4aup 7997156 YP_002971227.1 CDS dcp NC_012846.1 266871 268895 D peptidyl-dipeptidase Dcp 266871..268895 Bartonella grahamii as4aup 7997157 YP_002971228.1 CDS Bgr_01820 NC_012846.1 269058 270149 R hypothetical protein complement(269058..270149) Bartonella grahamii as4aup 7997158 YP_002971229.1 CDS Bgr_01830 NC_012846.1 270149 271405 R membrane-bound lytic murein transglycosylase complement(270149..271405) Bartonella grahamii as4aup 7997159 YP_002971230.1 CDS galU NC_012846.1 271665 272561 D UTP-glucose-1-phosphate uridylyltransferase 271665..272561 Bartonella grahamii as4aup 7997160 YP_002971231.1 CDS kpsF NC_012846.1 272601 273593 D sugar isomerase 272601..273593 Bartonella grahamii as4aup 7997161 YP_002971232.1 CDS Bgr_01860 NC_012846.1 273870 274229 R outer membrane lipoprotein precursor complement(273870..274229) Bartonella grahamii as4aup 7997162 YP_002971233.1 CDS Bgr_01870 NC_012846.1 274483 275868 D sigma-54 activator 274483..275868 Bartonella grahamii as4aup 7997163 YP_002971234.1 CDS Bgr_01880 NC_012846.1 276274 277845 D phopholipase D family protein 276274..277845 Bartonella grahamii as4aup 7997164 YP_002971235.1 CDS guaB NC_012846.1 277995 279494 D catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase 277995..279494 Bartonella grahamii as4aup 7997165 YP_002971236.1 CDS sun1 NC_012846.1 280324 281610 D SUN family protein 280324..281610 Bartonella grahamii as4aup 7997166 YP_002971237.1 CDS guaA NC_012846.1 281743 283299 D contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 281743..283299 Bartonella grahamii as4aup 7997167 YP_002971238.1 CDS Bgr_01920 NC_012846.1 283470 284192 D glycerophosphoryl diester phosphodiesterase 283470..284192 Bartonella grahamii as4aup 7997168 YP_002971239.1 CDS ugpB NC_012846.1 285120 286454 D sn-glycerol-3-phosphate-binding periplasmic protein precursor UgpB 285120..286454 Bartonella grahamii as4aup 7997169 YP_002971240.1 CDS ugpA NC_012846.1 286550 287434 D sn-glycerol-3-phosphate transport system permease protein UgpA 286550..287434 Bartonella grahamii as4aup 7997170 YP_002971241.1 CDS ugpE NC_012846.1 287445 288296 D sn-glycerol-3-phosphate transport system permease protein UgpE 287445..288296 Bartonella grahamii as4aup 7997171 YP_002971242.1 CDS ugpC NC_012846.1 288299 289345 D part of the UgpABCE glycerol-3-phosphate uptake system; glycerol-3-phosphate transporter ATP-binding subunit 288299..289345 Bartonella grahamii as4aup 7997172 YP_002971243.1 CDS Bgr_01990 NC_012846.1 291281 292198 R ABC transporter substrate-binding protein complement(291281..292198) Bartonella grahamii as4aup 7997175 YP_002971244.1 CDS Bgr_02000 NC_012846.1 292208 293077 R ABC transporter permease complement(292208..293077) Bartonella grahamii as4aup 7997176 YP_002971245.1 CDS Bgr_02010 NC_012846.1 293081 293845 R ABC transporter ATP-binding protein complement(293081..293845) Bartonella grahamii as4aup 7997177 YP_002971246.1 CDS nrdH NC_012846.1 294515 294739 D glutaredoxin-like protein NrdH 294515..294739 Bartonella grahamii as4aup 7997178 YP_002971247.1 CDS nrdI NC_012846.1 294739 295137 D in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF; ribonucleotide reductase stimulatory protein 294739..295137 Bartonella grahamii as4aup 7997179 YP_002971248.1 CDS nrdE NC_012846.1 295119 297269 D Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 295119..297269 Bartonella grahamii as4aup 7997180 YP_002971249.1 CDS nrdF NC_012846.1 297281 298255 D B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE; ribonucleotide-diphosphate reductase subunit beta 297281..298255 Bartonella grahamii as4aup 7997181 YP_002971250.1 CDS hemK NC_012846.1 298252 299118 R protoporphyrinogen oxidase protein complement(298252..299118) Bartonella grahamii as4aup 7997182 YP_002971251.1 CDS prfA NC_012846.1 299115 300191 R recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 complement(299115..300191) Bartonella grahamii as4aup 7997183 YP_002971252.1 CDS fur2 NC_012846.1 300414 300827 R ferric uptake regulator complement(300414..300827) Bartonella grahamii as4aup 7997184 YP_002971253.1 CDS secA NC_012846.1 300844 303561 R functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA complement(300844..303561) Bartonella grahamii as4aup 7997185 YP_002971254.1 CDS Bgr_02100 NC_012846.1 303996 304949 D peptidyl-prolyl cis-trans isomerase 303996..304949 Bartonella grahamii as4aup 7997186 YP_002971255.1 CDS argJ NC_012846.1 305081 306313 D bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein 305081..306313 Bartonella grahamii as4aup 7997187 YP_002971256.1 CDS mutT NC_012846.1 306443 306856 D mutator MutT protein 306443..306856 Bartonella grahamii as4aup 7997188 YP_002971257.1 CDS Bgr_02130 NC_012846.1 307636 308499 R hypothetical protein complement(307636..308499) Bartonella grahamii as4aup 7997189 YP_002971258.1 CDS pepA NC_012846.1 308657 310030 R leucyl aminopeptidase complement(308657..310030) Bartonella grahamii as4aup 7997190 YP_002971259.1 CDS coaA NC_012846.1 310044 311042 R catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis; pantothenate kinase complement(310044..311042) Bartonella grahamii as4aup 7997191 YP_002971260.1 CDS ansA NC_012846.1 311165 312154 R L-asparaginase complement(311165..312154) Bartonella grahamii as4aup 7997192 YP_002971261.1 CDS hslV NC_012846.1 312375 312956 D heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 312375..312956 Bartonella grahamii as4aup 7997193 YP_002971262.1 CDS hslU NC_012846.1 312957 314267 D heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 312957..314267 Bartonella grahamii as4aup 7997194 YP_002971263.1 CDS rsmC NC_012846.1 314286 315314 R ribosomal RNA small subunit methyltransferase C complement(314286..315314) Bartonella grahamii as4aup 7997195 YP_002971264.1 CDS pnp NC_012846.1 315354 317549 R polynucleotide phosphorylase/polyadenylase complement(315354..317549) Bartonella grahamii as4aup 7997196 YP_002971265.1 CDS rpsO NC_012846.1 317801 318070 R primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 complement(317801..318070) Bartonella grahamii as4aup 7997197 YP_002971266.1 CDS Bgr_02220 NC_012846.1 318385 320013 D transport transmembrane protein 318385..320013 Bartonella grahamii as4aup 7997198 YP_002971267.1 CDS truB NC_012846.1 320478 321440 R catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B complement(320478..321440) Bartonella grahamii as4aup 7997199 YP_002971268.1 CDS rbfA NC_012846.1 321445 321852 R associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A complement(321445..321852) Bartonella grahamii as4aup 7997200 YP_002971269.1 CDS infB NC_012846.1 321975 324494 R Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 complement(321975..324494) Bartonella grahamii as4aup 7997201 YP_002971270.1 CDS Bgr_02260 NC_012846.1 324491 325126 R hypothetical protein complement(324491..325126) Bartonella grahamii as4aup 7997202 YP_002971271.1 CDS nusA NC_012846.1 325127 326758 R modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA complement(325127..326758) Bartonella grahamii as4aup 7997203 YP_002971272.1 CDS Bgr_02280 NC_012846.1 326806 327456 R in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein complement(326806..327456) Bartonella grahamii as4aup 7997204 YP_002971273.1 CDS trmB NC_012846.1 327584 328285 R tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase complement(327584..328285) Bartonella grahamii as4aup 7997205 YP_002971274.1 CDS metK NC_012846.1 328282 329550 R catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase complement(328282..329550) Bartonella grahamii as4aup 7997206 YP_002971275.1 CDS Bgr_02310 NC_012846.1 329681 330094 R transcriptional regulator complement(329681..330094) Bartonella grahamii as4aup 7997207 YP_002971276.1 CDS lnt NC_012846.1 330243 331877 R Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase complement(330243..331877) Bartonella grahamii as4aup 7997208 YP_002971277.1 CDS tlyC NC_012846.1 331840 332865 R hemolysin complement(331840..332865) Bartonella grahamii as4aup 7997209 YP_002971278.1 CDS Bgr_02340 NC_012846.1 332951 333442 R hypothetical protein complement(332951..333442) Bartonella grahamii as4aup 7997210 YP_002971279.1 CDS phoH NC_012846.1 333439 334563 R phosphate starvation-induced protein phoH complement(333439..334563) Bartonella grahamii as4aup 7997211 YP_002971280.1 CDS Bgr_02360 NC_012846.1 334722 336098 R catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase complement(334722..336098) Bartonella grahamii as4aup 7998995 YP_002971281.1 CDS Bgr_02370 NC_012846.1 336139 336621 R ribosomal-protein-alanine N-acetyltransferase complement(336139..336621) Bartonella grahamii as4aup 7997212 YP_002971282.1 CDS Bgr_02380 NC_012846.1 336621 337307 R glycoprotease family protein complement(336621..337307) Bartonella grahamii as4aup 7997213 YP_002971283.1 CDS Bgr_02390 NC_012846.1 338060 339088 R hypothetical integral membrane protein complement(338060..339088) Bartonella grahamii as4aup 7997214 YP_002971284.1 CDS recR NC_012846.1 339138 339743 R involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR complement(339138..339743) Bartonella grahamii as4aup 7997215 YP_002971285.1 CDS Bgr_02410 NC_012846.1 339774 340097 R hypothetical protein complement(339774..340097) Bartonella grahamii as4aup 7997216 YP_002971286.1 CDS dnaX NC_012846.1 340112 342052 R catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau complement(340112..342052) Bartonella grahamii as4aup 7997217 YP_002971287.1 CDS Bgr_02430 NC_012846.1 343966 344373 R hypothetical protein complement(343966..344373) Bartonella grahamii as4aup 7997218 YP_002971288.1 CDS pheA NC_012846.1 344718 345503 R catalyzes the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis; prephenate dehydratase complement(344718..345503) Bartonella grahamii as4aup 7997219 YP_002971289.1 CDS kdsB NC_012846.1 345578 346309 R CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase complement(345578..346309) Bartonella grahamii as4aup 7997220 YP_002971290.1 CDS Bgr_02460 NC_012846.1 346414 346977 D cytochrome c 346414..346977 Bartonella grahamii as4aup 7997221 YP_002971291.1 CDS moeB NC_012846.1 347871 348665 R ATP-dependent adenylate transferase, transfers adenyl moiety to the MoeD subunit of molybdopterin synthase; molybdopterin biosynthesis protein MoeB complement(347871..348665) Bartonella grahamii as4aup 7997224 YP_002971292.1 CDS gshB NC_012846.1 348753 349691 D catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase 348753..349691 Bartonella grahamii as4aup 7997225 YP_002971293.1 CDS Bgr_02510 NC_012846.1 349834 350880 D periplasmic phosphate binding protein 349834..350880 Bartonella grahamii as4aup 7997226 YP_002971294.1 CDS pstC NC_012846.1 350956 352416 D phosphate ABC transporter permease 350956..352416 Bartonella grahamii as4aup 7997227 YP_002971295.1 CDS pstA NC_012846.1 352413 353702 D phosphate ABC transporter permease 352413..353702 Bartonella grahamii as4aup 7997228 YP_002971296.1 CDS pstB NC_012846.1 353753 354511 D ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein 353753..354511 Bartonella grahamii as4aup 7997229 YP_002971297.1 CDS phoU NC_012846.1 354533 355255 D phosphate transport system regulatory protein PhoU 354533..355255 Bartonella grahamii as4aup 7997230 YP_002971298.1 CDS Bgr_02560 NC_012846.1 355852 356688 D cell wall hydrolase SleB 355852..356688 Bartonella grahamii as4aup 7997231 YP_002971299.1 CDS pepS NC_012846.1 356863 358110 D aminopeptidase 356863..358110 Bartonella grahamii as4aup 7997232 YP_002971300.1 CDS mutM NC_012846.1 358382 359257 D Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 358382..359257 Bartonella grahamii as4aup 7997233 YP_002971301.1 CDS Bgr_02590 NC_012846.1 359341 360735 D hypothetical protein 359341..360735 Bartonella grahamii as4aup 7997234 YP_002971302.1 CDS Bgr_02600 NC_012846.1 360728 361348 D 3'-5' exonuclease 360728..361348 Bartonella grahamii as4aup 7997235 YP_002971303.1 CDS Bgr_02620 NC_012846.1 362790 363119 D hypothetical protein 362790..363119 Bartonella grahamii as4aup 7997237 YP_002971304.1 CDS hbpC1 NC_012846.1 365022 365855 D hemin binding protein C 365022..365855 Bartonella grahamii as4aup 7997239 YP_002971305.1 CDS hbpA1 NC_012846.1 366150 367016 D hemin binding protein A 366150..367016 Bartonella grahamii as4aup 7997240 YP_002971306.1 CDS hbpA2 NC_012846.1 368377 369267 D hemin binding protein A 368377..369267 Bartonella grahamii as4aup 7997242 YP_002971307.1 CDS hbpB NC_012846.1 370755 372503 D hemin binding protein B 370755..372503 Bartonella grahamii as4aup 7997245 YP_002971308.1 CDS ileS NC_012846.1 372752 375667 D IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 372752..375667 Bartonella grahamii as4aup 7997246 YP_002971309.1 CDS Bgr_02720 NC_012846.1 375845 376336 D hypothetical protein 375845..376336 Bartonella grahamii as4aup 7997247 YP_002971310.1 CDS codA NC_012846.1 376984 377430 R cytidine and deoxycytidylate deaminase complement(376984..377430) Bartonella grahamii as4aup 7997248 YP_002971311.1 CDS Bgr_02740 NC_012846.1 377700 379100 D ribosomal large subunit pseudouridine synthase B 377700..379100 Bartonella grahamii as4aup 7997249 YP_002971312.1 CDS Bgr_02750 NC_012846.1 379081 379647 D hypothetical protein 379081..379647 Bartonella grahamii as4aup 7997250 YP_002971313.1 CDS Bgr_02770 NC_012846.1 380453 380902 D hypothetical protein 380453..380902 Bartonella grahamii as4aup 7997252 YP_002971314.1 CDS pmbA NC_012846.1 382603 383934 D PmbA protein 382603..383934 Bartonella grahamii as4aup 7997253 YP_002971315.1 CDS Bgr_02790 NC_012846.1 383999 384724 D inositol monophosphatase 383999..384724 Bartonella grahamii as4aup 7997254 YP_002971316.1 CDS Bgr_02800 NC_012846.1 384771 385016 D hypothetical protein 384771..385016 Bartonella grahamii as4aup 7997255 YP_002971317.1 CDS kdtA NC_012846.1 386464 387786 D catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A; 3-deoxy-D-manno-octulosonic-acid transferase 386464..387786 Bartonella grahamii as4aup 7997257 YP_002971318.1 CDS lpxK NC_012846.1 387776 388816 D transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase 387776..388816 Bartonella grahamii as4aup 7997258 YP_002971319.1 CDS Bgr_02840 NC_012846.1 388836 389072 R hypothetical protein complement(388836..389072) Bartonella grahamii as4aup 7997259 YP_002971320.1 CDS mutL NC_012846.1 389181 391034 R This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein complement(389181..391034) Bartonella grahamii as4aup 7997260 YP_002971321.1 CDS Bgr_02860 NC_012846.1 391274 392362 D Catalyzes the deamination of dCTP to form dUTP; 2'-deoxycytidine 5'-triphosphate deaminase 391274..392362 Bartonella grahamii as4aup 7997261 YP_002971322.1 CDS lldD NC_012846.1 393518 394669 D flavin mononucleotide-dependent dehydrogenase; functions in aerobic respiration and also has a role in anaerobic nitrate respiration; L-lactate dehydrogenase 393518..394669 Bartonella grahamii as4aup 7997262 YP_002971323.1 CDS Bgr_02910 NC_012846.1 398518 398634 R hypothetical protein complement(398518..398634) Bartonella grahamii as4aup 7997266 YP_002971324.1 CDS Bgr_02920 NC_012846.1 398670 399332 R phage related lysozyme complement(398670..399332) Bartonella grahamii as4aup 7997267 YP_002971325.1 CDS Bgr_02930 NC_012846.1 400198 400338 D putative phage related exonuclease 400198..400338 Bartonella grahamii as4aup 7997268 YP_002971326.1 CDS Bgr_02940 NC_012846.1 400384 400575 D putative phage transcriptional regulator 400384..400575 Bartonella grahamii as4aup 7997269 YP_002971327.1 CDS Bgr_02960 NC_012846.1 401191 401394 D SlyX protein 401191..401394 Bartonella grahamii as4aup 7997271 YP_002971328.1 CDS Bgr_02970 NC_012846.1 401967 402305 R hypothetical protein complement(401967..402305) Bartonella grahamii as4aup 7997272 YP_002971329.1 CDS pheP NC_012846.1 402470 403897 D phenylalanine-specific permease 402470..403897 Bartonella grahamii as4aup 7997273 YP_002971330.1 CDS Bgr_02990 NC_012846.1 403938 404618 D ABC transporter ATP-binding protein 403938..404618 Bartonella grahamii as4aup 7997274 YP_002971331.1 CDS Bgr_03000 NC_012846.1 404615 405253 D cobalt transport protein 404615..405253 Bartonella grahamii as4aup 7997275 YP_002971332.1 CDS Bgr_03010 NC_012846.1 405269 405838 D biotin synthase 405269..405838 Bartonella grahamii as4aup 7997276 YP_002971333.1 CDS Bgr_03020 NC_012846.1 406096 406641 D biotin synthase 406096..406641 Bartonella grahamii as4aup 7997277 YP_002971334.1 CDS Bgr_03060 NC_012846.1 407876 408733 D hypothetical protein 407876..408733 Bartonella grahamii as4aup 7997280 YP_002971335.1 CDS Bgr_03070 NC_012846.1 408806 409255 R hypothetical membrane protein complement(408806..409255) Bartonella grahamii as4aup 7997281 YP_002971336.1 CDS Bgr_03080 NC_012846.1 409897 410100 R hypothetical protein complement(409897..410100) Bartonella grahamii as4aup 7997282 YP_002971337.1 CDS hec1 NC_012846.1 410633 411997 D hemolysin activator protein Hec 410633..411997 Bartonella grahamii as4aup 7997283 YP_002971338.1 CDS Bgr_03110 NC_012846.1 412572 413036 D hypothetical protein 412572..413036 Bartonella grahamii as4aup 7997285 YP_002971339.1 CDS Bgr_03120 NC_012846.1 413145 413612 D hypothetical protein 413145..413612 Bartonella grahamii as4aup 7997286 YP_002971340.1 CDS Bgr_03130 NC_012846.1 413609 416167 D hypothetical protein 413609..416167 Bartonella grahamii as4aup 7997287 YP_002971341.1 CDS Bgr_03150 NC_012846.1 416899 417369 D hypothetical protein 416899..417369 Bartonella grahamii as4aup 7997289 YP_002971342.1 CDS Bgr_03160 NC_012846.1 417366 418040 D hypothetical protein 417366..418040 Bartonella grahamii as4aup 7997290 YP_002971343.1 CDS Bgr_03170 NC_012846.1 417970 419079 D hypothetical protein 417970..419079 Bartonella grahamii as4aup 7997291 YP_002971344.1 CDS Bgr_03180 NC_012846.1 419150 419812 D phage related lysozyme 419150..419812 Bartonella grahamii as4aup 7997292 YP_002971345.1 CDS Bgr_03190 NC_012846.1 419809 420036 D hypothetical protein 419809..420036 Bartonella grahamii as4aup 7997293 YP_002971346.1 CDS Bgr_03200 NC_012846.1 420059 420193 D hypothetical protein 420059..420193 Bartonella grahamii as4aup 7997294 YP_002971347.1 CDS Bgr_03210 NC_012846.1 420165 420383 D hypothetical membrane protein 420165..420383 Bartonella grahamii as4aup 7997295 YP_002971348.1 CDS Bgr_03220 NC_012846.1 420408 421193 D adenine-specific DNA methyltransferase 420408..421193 Bartonella grahamii as4aup 7997296 YP_002971349.1 CDS Bgr_03230 NC_012846.1 421258 421632 D putative transcriptional regulator 421258..421632 Bartonella grahamii as4aup 7997297 YP_002971350.1 CDS Bgr_03240 NC_012846.1 421937 423094 D phage integrase 421937..423094 Bartonella grahamii as4aup 7997298 YP_002971351.1 CDS Bgr_03260 NC_012846.1 423319 423543 R hypothetical membrane protein complement(423319..423543) Bartonella grahamii as4aup 7997300 YP_002971352.1 CDS Bgr_03270 NC_012846.1 423663 423890 R hypothetical protein complement(423663..423890) Bartonella grahamii as4aup 7997301 YP_002971353.1 CDS Bgr_03280 NC_012846.1 423887 424549 R phage related lysozyme complement(423887..424549) Bartonella grahamii as4aup 7997302 YP_002971354.1 CDS Bgr_03290 NC_012846.1 424709 425011 D phage-related addiction module killer protein 424709..425011 Bartonella grahamii as4aup 7997303 YP_002971355.1 CDS Bgr_03300 NC_012846.1 424998 425318 D putative phage-related addiction module antidote protein 424998..425318 Bartonella grahamii as4aup 7997304 YP_002971356.1 CDS gpD1 NC_012846.1 425403 426707 R phage late control protein D1 complement(425403..426707) Bartonella grahamii as4aup 7997305 YP_002971357.1 CDS gpX1 NC_012846.1 426704 426928 R phage tail protein X1 complement(426704..426928) Bartonella grahamii as4aup 7997306 YP_002971358.1 CDS gpU1 NC_012846.1 426925 427305 R phage tail protein U1 complement(426925..427305) Bartonella grahamii as4aup 7997307 YP_002971359.1 CDS Bgr_03340 NC_012846.1 427311 429443 R phage tail protein complement(427311..429443) Bartonella grahamii as4aup 7997308 YP_002971360.1 CDS Bgr_03350 NC_012846.1 429550 429837 R putative phage related protein complement(429550..429837) Bartonella grahamii as4aup 7997309 YP_002971361.1 CDS gpFII NC_012846.1 429840 430346 R phage tail tube protein FII complement(429840..430346) Bartonella grahamii as4aup 7997310 YP_002971362.1 CDS gpFI NC_012846.1 430346 431737 R phage tail sheath protein FI complement(430346..431737) Bartonella grahamii as4aup 7997311 YP_002971363.1 CDS Bgr_03390 NC_012846.1 433254 434366 R phage tail collar protein complement(433254..434366) Bartonella grahamii as4aup 7997313 YP_002971364.1 CDS Bgr_03400 NC_012846.1 434381 437524 R phage related protein, virulence-associated complement(434381..437524) Bartonella grahamii as4aup 7997314 YP_002971365.1 CDS Bgr_03410 NC_012846.1 437526 438632 R phage protein complement(437526..438632) Bartonella grahamii as4aup 7997315 YP_002971366.1 CDS gpJ1 NC_012846.1 438632 439459 R phage baseplate assembly protein GpJ1 complement(438632..439459) Bartonella grahamii as4aup 7997316 YP_002971367.1 CDS gpW1 NC_012846.1 439456 439785 R phage baseplate assembly protein GpW1 complement(439456..439785) Bartonella grahamii as4aup 7997317 YP_002971368.1 CDS gpV1 NC_012846.1 439794 440483 R phage baseplate assembly protein V1 complement(439794..440483) Bartonella grahamii as4aup 7997318 YP_002971369.1 CDS Bgr_03450 NC_012846.1 440464 441012 R hypothetical protein complement(440464..441012) Bartonella grahamii as4aup 7997319 YP_002971370.1 CDS Bgr_03460 NC_012846.1 441089 441388 D hypothetical protein 441089..441388 Bartonella grahamii as4aup 7997320 YP_002971371.1 CDS Bgr_03470 NC_012846.1 441375 441647 D hypothetical protein 441375..441647 Bartonella grahamii as4aup 7997321 YP_002971372.1 CDS Bgr_03480 NC_012846.1 441686 442003 D HicB family protein 441686..442003 Bartonella grahamii as4aup 7997322 YP_002971373.1 CDS Bgr_03490 NC_012846.1 442083 442247 R hypothetical protein complement(442083..442247) Bartonella grahamii as4aup 7997323 YP_002971374.1 CDS Bgr_03500 NC_012846.1 442358 443095 R anti-repressor protein complement(442358..443095) Bartonella grahamii as4aup 7997324 YP_002971375.1 CDS Bgr_03520 NC_012846.1 443433 443786 R hypothetical protein complement(443433..443786) Bartonella grahamii as4aup 7997326 YP_002971376.1 CDS gp20 NC_012846.1 443788 444864 R phage protein Gp20 complement(443788..444864) Bartonella grahamii as4aup 7997327 YP_002971377.1 CDS gp19 NC_012846.1 444877 445260 R phage protein Gp19 complement(444877..445260) Bartonella grahamii as4aup 7997328 YP_002971378.1 CDS gp18 NC_012846.1 445505 446569 R phage protein Gp18 complement(445505..446569) Bartonella grahamii as4aup 7997329 YP_002971379.1 CDS Bgr_03560 NC_012846.1 446577 448121 R phage portal protein complement(446577..448121) Bartonella grahamii as4aup 7997330 YP_002971380.1 CDS Bgr_03570 NC_012846.1 448121 448369 R putative phage related protein complement(448121..448369) Bartonella grahamii as4aup 7997331 YP_002971381.1 CDS gpA1 NC_012846.1 448373 450319 R phage terminase large subunit GpA1 complement(448373..450319) Bartonella grahamii as4aup 7997332 YP_002971382.1 CDS Bgr_03590 NC_012846.1 450309 450878 R phage protein complement(450309..450878) Bartonella grahamii as4aup 7997333 YP_002971383.1 CDS Bgr_03600 NC_012846.1 451246 451791 R hypothetical protein complement(451246..451791) Bartonella grahamii as4aup 7997334 YP_002971384.1 CDS Bgr_03610 NC_012846.1 451834 452124 R hypothetical protein complement(451834..452124) Bartonella grahamii as4aup 7997335 YP_002971385.1 CDS Bgr_03620 NC_012846.1 452467 452862 R putative transcriptional regulator, CopG family complement(452467..452862) Bartonella grahamii as4aup 7997336 YP_002971386.1 CDS Bgr_03630 NC_012846.1 452859 453059 R YcfA family protein complement(452859..453059) Bartonella grahamii as4aup 7997337 YP_002971387.1 CDS Bgr_03640 NC_012846.1 453127 453663 R hypothetical protein complement(453127..453663) Bartonella grahamii as4aup 7997338 YP_002971388.1 CDS ssb1 NC_012846.1 453675 454115 R single-strand binding protein complement(453675..454115) Bartonella grahamii as4aup 7997339 YP_002971389.1 CDS Bgr_03660 NC_012846.1 454429 454620 D hypothetical protein 454429..454620 Bartonella grahamii as4aup 7997340 YP_002971390.1 CDS Bgr_03670 NC_012846.1 454687 455115 D putative transcriptional regulator 454687..455115 Bartonella grahamii as4aup 7997341 YP_002971391.1 CDS Bgr_03680 NC_012846.1 455163 455345 R hypothetical protein complement(455163..455345) Bartonella grahamii as4aup 7997342 YP_002971392.1 CDS Bgr_03690 NC_012846.1 455438 456181 R anti-repressor protein complement(455438..456181) Bartonella grahamii as4aup 7997343 YP_002971393.1 CDS Bgr_03710 NC_012846.1 456560 457075 R hypothetical membrane protein complement(456560..457075) Bartonella grahamii as4aup 7997345 YP_002971394.1 CDS Bgr_03720 NC_012846.1 457062 457409 R hypothetical protein complement(457062..457409) Bartonella grahamii as4aup 7997346 YP_002971395.1 CDS Bgr_03730 NC_012846.1 457592 457978 R hypothetical protein complement(457592..457978) Bartonella grahamii as4aup 7997347 YP_002971396.1 CDS Bgr_03740 NC_012846.1 457962 459212 R hypothetical protein complement(457962..459212) Bartonella grahamii as4aup 7997348 YP_002971397.1 CDS Bgr_03750 NC_012846.1 459202 459525 R phage related protein complement(459202..459525) Bartonella grahamii as4aup 7997349 YP_002971398.1 CDS Bgr_03760 NC_012846.1 459518 459994 R phage related protein complement(459518..459994) Bartonella grahamii as4aup 7997350 YP_002971399.1 CDS Bgr_03770 NC_012846.1 460531 460905 R hypothetical DNA-binding protein complement(460531..460905) Bartonella grahamii as4aup 7997351 YP_002971400.1 CDS Bgr_03780 NC_012846.1 460989 461606 D phage repressor protein 460989..461606 Bartonella grahamii as4aup 7997352 YP_002971401.1 CDS Bgr_03790 NC_012846.1 461852 462226 D hypothetical protein 461852..462226 Bartonella grahamii as4aup 7997353 YP_002971402.1 CDS Bgr_03800 NC_012846.1 462664 463392 D anti-repressor protein 462664..463392 Bartonella grahamii as4aup 7997354 YP_002971403.1 CDS Bgr_03810 NC_012846.1 463532 464326 D phage related protein 463532..464326 Bartonella grahamii as4aup 7997355 YP_002971404.1 CDS exo1 NC_012846.1 464328 464951 D phage-related exonuclease 464328..464951 Bartonella grahamii as4aup 7997356 YP_002971405.1 CDS Bgr_03830 NC_012846.1 465024 465227 D putative phage transcriptional regulator 465024..465227 Bartonella grahamii as4aup 7997357 YP_002971406.1 CDS serC NC_012846.1 465799 466962 D catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; phosphoserine aminotransferase 465799..466962 Bartonella grahamii as4aup 7997359 YP_002971407.1 CDS purA NC_012846.1 467346 468635 D catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 467346..468635 Bartonella grahamii as4aup 7997360 YP_002971408.1 CDS Bgr_03870 NC_012846.1 468877 470298 D putative transmembrane protein 468877..470298 Bartonella grahamii as4aup 7997361 YP_002971409.1 CDS rpoH1 NC_012846.1 470490 471374 R binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; RNA polymerase factor sigma-32 complement(470490..471374) Bartonella grahamii as4aup 7997362 YP_002971410.1 CDS rluD NC_012846.1 471522 472526 R ribosomal large subunit pseudouridine synthase D complement(471522..472526) Bartonella grahamii as4aup 7997363 YP_002971411.1 CDS aldA NC_012846.1 472556 473986 R aldehyde dehydrogenase complement(472556..473986) Bartonella grahamii as4aup 7997364 YP_002971412.1 CDS ftsK1 NC_012846.1 474456 477032 D cell division protein FtsK 474456..477032 Bartonella grahamii as4aup 7997365 YP_002971413.1 CDS Bgr_03940 NC_012846.1 478214 479920 D sensory box histidine kinase 478214..479920 Bartonella grahamii as4aup 7997368 YP_002971414.1 CDS mscL NC_012846.1 479939 480346 R homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel complement(479939..480346) Bartonella grahamii as4aup 7997369 YP_002971415.1 CDS pyrD NC_012846.1 481676 482758 D catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 481676..482758 Bartonella grahamii as4aup 7997370 YP_002971416.1 CDS Bgr_03980 NC_012846.1 483501 483815 D hypothetical protein 483501..483815 Bartonella grahamii as4aup 7997372 YP_002971417.1 CDS Bgr_03990 NC_012846.1 483904 484803 D putative integral membrane protein 483904..484803 Bartonella grahamii as4aup 7997373 YP_002971418.1 CDS Bgr_04000 NC_012846.1 485165 485869 D putative integral membrane protein 485165..485869 Bartonella grahamii as4aup 7997374 YP_002971419.1 CDS Bgr_04010 NC_012846.1 485923 486474 D putative integral membrane protein 485923..486474 Bartonella grahamii as4aup 7997375 YP_002971420.1 CDS Bgr_04020 NC_012846.1 486449 486805 D hypothetical protein 486449..486805 Bartonella grahamii as4aup 7997376 YP_002971421.1 CDS Bgr_04030 NC_012846.1 486808 487722 D putative integral membrane protein 486808..487722 Bartonella grahamii as4aup 7997377 YP_002971422.1 CDS Bgr_04050 NC_012846.1 488323 489111 D hypothetical protein 488323..489111 Bartonella grahamii as4aup 7997379 YP_002971423.1 CDS Bgr_04060 NC_012846.1 489104 489661 D membrane protein 489104..489661 Bartonella grahamii as4aup 7997380 YP_002971424.1 CDS Bgr_04070 NC_012846.1 489663 490166 D membrane protein 489663..490166 Bartonella grahamii as4aup 7997381 YP_002971425.1 CDS Bgr_04100 NC_012846.1 492666 494603 D type III restriction-modification system methylation subunit 492666..494603 Bartonella grahamii as4aup 7997384 YP_002971426.1 CDS Bgr_04110 NC_012846.1 494632 497829 D putative type III restriction enzyme, res subunit 494632..497829 Bartonella grahamii as4aup 7997385 YP_002971427.1 CDS Bgr_04120 NC_012846.1 498342 499379 D MccC-like permease 498342..499379 Bartonella grahamii as4aup 7997386 YP_002971428.1 CDS Bgr_04150 NC_012846.1 501160 502425 R permease of the major facilitator superfamily complement(501160..502425) Bartonella grahamii as4aup 7997389 YP_002971429.1 CDS Bgr_04160 NC_012846.1 502391 503827 R coproporphyrinogen III oxidase complement(502391..503827) Bartonella grahamii as4aup 7997390 YP_002971430.1 CDS glnA1 NC_012846.1 505737 507164 D glutamine synthetase 505737..507164 Bartonella grahamii as4aup 7997393 YP_002971431.1 CDS Bgr_04200 NC_012846.1 507176 508459 D oxidoreductase 507176..508459 Bartonella grahamii as4aup 7997394 YP_002971432.1 CDS zwf NC_012846.1 508580 510052 D catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 508580..510052 Bartonella grahamii as4aup 7997395 YP_002971433.1 CDS pgl NC_012846.1 510063 510815 D 6-phosphogluconolactonase 510063..510815 Bartonella grahamii as4aup 7997396 YP_002971434.1 CDS edd NC_012846.1 510872 512695 D catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate; phosphogluconate dehydratase 510872..512695 Bartonella grahamii as4aup 7997397 YP_002971435.1 CDS folD NC_012846.1 512762 513661 R catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase complement(512762..513661) Bartonella grahamii as4aup 7997398 YP_002971436.1 CDS Bgr_04250 NC_012846.1 513976 515856 D AsmA family protein 513976..515856 Bartonella grahamii as4aup 7997399 YP_002971437.1 CDS Bgr_04260 NC_012846.1 516170 516313 R hypothetical protein complement(516170..516313) Bartonella grahamii as4aup 7997400 YP_002971438.1 CDS Bgr_04270 NC_012846.1 516549 517292 D in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 516549..517292 Bartonella grahamii as4aup 7997401 YP_002971439.1 CDS gshA NC_012846.1 517361 518734 D glutamate-cysteine ligase 517361..518734 Bartonella grahamii as4aup 7997402 YP_002971440.1 CDS Bgr_04300 NC_012846.1 522893 524248 D sodium/dicarboxylate symporter 522893..524248 Bartonella grahamii as4aup 7997404 YP_002971441.1 CDS Bgr_04310 NC_012846.1 524256 525134 R methyltransferase complement(524256..525134) Bartonella grahamii as4aup 7997405 YP_002971442.1 CDS comF NC_012846.1 525332 526117 D competence protein ComF 525332..526117 Bartonella grahamii as4aup 7997406 YP_002971443.1 CDS grxC NC_012846.1 526165 526419 D glutaredoxin 526165..526419 Bartonella grahamii as4aup 7997407 YP_002971444.1 CDS ubiG NC_012846.1 526440 527183 R Involved in ubiquinone biosynthesis; 3-demethylubiquinone-9 3-methyltransferase complement(526440..527183) Bartonella grahamii as4aup 7997408 YP_002971445.1 CDS lysC NC_012846.1 527373 528629 D catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase 527373..528629 Bartonella grahamii as4aup 7997409 YP_002971446.1 CDS Bgr_04370 NC_012846.1 531486 532844 R sodium-proton antiporter complement(531486..532844) Bartonella grahamii as4aup 7997411 YP_002971447.1 CDS Bgr_04380 NC_012846.1 532991 534682 R hypothetical protein complement(532991..534682) Bartonella grahamii as4aup 7997412 YP_002971448.1 CDS Bgr_04390 NC_012846.1 535052 536824 D transporter, TrkA family 535052..536824 Bartonella grahamii as4aup 7997413 YP_002971449.1 CDS Bgr_04400 NC_012846.1 537408 538079 D TPR domain; hypothetical protein 537408..538079 Bartonella grahamii as4aup 7997414 YP_002971450.1 CDS engA NC_012846.1 538084 539508 D EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 538084..539508 Bartonella grahamii as4aup 7997415 YP_002971451.1 CDS Bgr_04420 NC_012846.1 540607 541041 D ATP synthase protein I 540607..541041 Bartonella grahamii as4aup 7997416 YP_002971452.1 CDS atpB NC_012846.1 541049 541807 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 541049..541807 Bartonella grahamii as4aup 7997417 YP_002971453.1 CDS atpE NC_012846.1 541862 542092 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 541862..542092 Bartonella grahamii as4aup 7997418 YP_002971454.1 CDS atpF1 NC_012846.1 542224 542790 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B' is part of the membrane proton channel.; F0F1 ATP synthase subunit B' 542224..542790 Bartonella grahamii as4aup 7997419 YP_002971455.1 CDS atpF2 NC_012846.1 542802 543296 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B 542802..543296 Bartonella grahamii as4aup 7997420 YP_002971456.1 CDS glyS NC_012846.1 543421 545643 R glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta complement(543421..545643) Bartonella grahamii as4aup 7997421 YP_002971457.1 CDS glyQ NC_012846.1 545643 546584 R glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha complement(545643..546584) Bartonella grahamii as4aup 7997422 YP_002971458.1 CDS Bgr_04490 NC_012846.1 546670 548364 R hypothetical protein complement(546670..548364) Bartonella grahamii as4aup 7997423 YP_002971459.1 CDS ispB NC_012846.1 548460 549536 R octaprenyl-diphosphate synthase complement(548460..549536) Bartonella grahamii as4aup 7997424 YP_002971460.1 CDS Bgr_04510 NC_012846.1 549717 550505 D methyltransferase 549717..550505 Bartonella grahamii as4aup 7997425 YP_002971461.1 CDS sohB NC_012846.1 550697 551545 D protease SohB 550697..551545 Bartonella grahamii as4aup 7997426 YP_002971462.1 CDS ispE NC_012846.1 551786 552694 D An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 551786..552694 Bartonella grahamii as4aup 7997427 YP_002971463.1 CDS rnhB NC_012846.1 552877 553551 D RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 552877..553551 Bartonella grahamii as4aup 7997428 YP_002971464.1 CDS Bgr_04550 NC_012846.1 553548 554510 D translation factor, Sua5/YciO/YrdC family 553548..554510 Bartonella grahamii as4aup 7997429 YP_002971465.1 CDS Bgr_04560 NC_012846.1 554513 555922 D oxidoreductase 554513..555922 Bartonella grahamii as4aup 7997430 YP_002971466.1 CDS Bgr_04570 NC_012846.1 556067 556594 D hypothetical protein 556067..556594 Bartonella grahamii as4aup 7997431 YP_002971467.1 CDS purD NC_012846.1 557755 559029 R catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase complement(557755..559029) Bartonella grahamii as4aup 7997433 YP_002971468.1 CDS ubiA NC_012846.1 559120 560124 D UbiA prenyltransferase family catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin; 4-hydroxybenzoate polyprenyltransferase 559120..560124 Bartonella grahamii as4aup 7997434 YP_002971469.1 CDS pdxH NC_012846.1 560361 560984 R catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate; pyridoxamine 5'-phosphate oxidase complement(560361..560984) Bartonella grahamii as4aup 7997435 YP_002971470.1 CDS dnaJ1 NC_012846.1 561279 562181 D heat shock protein DnaJ 561279..562181 Bartonella grahamii as4aup 7997436 YP_002971471.1 CDS fabI2 NC_012846.1 562310 563128 D Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-(acyl carrier protein) reductase 562310..563128 Bartonella grahamii as4aup 7997437 YP_002971472.1 CDS aroC NC_012846.1 563277 564365 D catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 563277..564365 Bartonella grahamii as4aup 7997438 YP_002971473.1 CDS ribA NC_012846.1 564381 565484 D GTP cyclohydrolase II 564381..565484 Bartonella grahamii as4aup 7997439 YP_002971474.1 CDS xseB NC_012846.1 565492 565746 D catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit 565492..565746 Bartonella grahamii as4aup 7997440 YP_002971475.1 CDS dxs NC_012846.1 565983 567890 D catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 565983..567890 Bartonella grahamii as4aup 7997441 YP_002971476.1 CDS tlyA NC_012846.1 567907 568650 D hemolysin A 567907..568650 Bartonella grahamii as4aup 7997442 YP_002971477.1 CDS Bgr_04690 NC_012846.1 568647 569900 D RNA methyltransferase 568647..569900 Bartonella grahamii as4aup 7997443 YP_002971478.1 CDS tldD NC_012846.1 570441 571865 R TldD protein complement(570441..571865) Bartonella grahamii as4aup 7997444 YP_002971479.1 CDS Bgr_04710 NC_012846.1 571975 572556 R invasion associated locus B family protein complement(571975..572556) Bartonella grahamii as4aup 7997445 YP_002971480.1 CDS cyoE NC_012846.1 572864 573799 D converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 572864..573799 Bartonella grahamii as4aup 7997446 YP_002971481.1 CDS ispH NC_012846.1 573982 575037 D catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 573982..575037 Bartonella grahamii as4aup 7997447 YP_002971482.1 CDS thrB NC_012846.1 575037 575996 D catalyzes the formation of O-phospho-L-homoserine from L-homoserine; homoserine kinase 575037..575996 Bartonella grahamii as4aup 7997448 YP_002971483.1 CDS rnhA NC_012846.1 576002 576469 D An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease H 576002..576469 Bartonella grahamii as4aup 7997449 YP_002971484.1 CDS Bgr_04760 NC_012846.1 576493 577374 R hypothetical protein complement(576493..577374) Bartonella grahamii as4aup 7997450 YP_002971485.1 CDS Bgr_04770 NC_012846.1 577446 578030 D hypothetical protein 577446..578030 Bartonella grahamii as4aup 7997451 YP_002971486.1 CDS Bgr_04780 NC_012846.1 578073 580958 R sensor diguanylate cyclase/phosphodiesterase complement(578073..580958) Bartonella grahamii as4aup 7997452 YP_002971487.1 CDS Bgr_04790 NC_012846.1 581365 582639 R processing protease complement(581365..582639) Bartonella grahamii as4aup 7997453 YP_002971488.1 CDS thrC NC_012846.1 582723 584120 R catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase complement(582723..584120) Bartonella grahamii as4aup 7997454 YP_002971489.1 CDS Bgr_04810 NC_012846.1 584745 585107 R hypothetical membrane protein complement(584745..585107) Bartonella grahamii as4aup 7997455 YP_002971490.1 CDS Bgr_04820 NC_012846.1 585323 585685 R hypothetical membrane protein complement(585323..585685) Bartonella grahamii as4aup 7997456 YP_002971491.1 CDS Bgr_04830 NC_012846.1 585868 586224 R hypothetical membrane protein complement(585868..586224) Bartonella grahamii as4aup 7997457 YP_002971492.1 CDS Bgr_04860 NC_012846.1 588012 588707 R haloacid dehalogenase-like hydrolase complement(588012..588707) Bartonella grahamii as4aup 7997459 YP_002971493.1 CDS ccrM NC_012846.1 589031 590167 D adenine DNA methyltransferase 589031..590167 Bartonella grahamii as4aup 7997460 YP_002971494.1 CDS mutY NC_012846.1 590942 592000 R A/G-specific adenine glycosylase MutY complement(590942..592000) Bartonella grahamii as4aup 7997461 YP_002971495.1 CDS Bgr_04890 NC_012846.1 592143 592643 D hypothetical protein 592143..592643 Bartonella grahamii as4aup 7997462 YP_002971496.1 CDS Bgr_04900 NC_012846.1 592726 593382 D DSBA oxidoreductase 592726..593382 Bartonella grahamii as4aup 7997463 YP_002971497.1 CDS ppdK NC_012846.1 593560 596226 D catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate phosphate dikinase 593560..596226 Bartonella grahamii as4aup 7997464 YP_002971498.1 CDS Bgr_04930 NC_012846.1 597972 598808 R peptidoglycan-binding protein complement(597972..598808) Bartonella grahamii as4aup 7997466 YP_002971499.1 CDS Bgr_04940 NC_012846.1 599940 600257 D hypothetical protein 599940..600257 Bartonella grahamii as4aup 7997467 YP_002971500.1 CDS Bgr_04950 NC_012846.1 600424 600834 D cysteine desulfuration protein SufE 600424..600834 Bartonella grahamii as4aup 7997468 YP_002971501.1 CDS Bgr_04960 NC_012846.1 600933 601370 R transcriptional regulator, Ros/MucR family complement(600933..601370) Bartonella grahamii as4aup 7997469 YP_002971502.1 CDS Bgr_04970 NC_012846.1 602226 604319 D protease II 602226..604319 Bartonella grahamii as4aup 7997470 YP_002971503.1 CDS sodB NC_012846.1 604403 605005 R superoxide dismutase complement(604403..605005) Bartonella grahamii as4aup 7997471 YP_002971504.1 CDS Bgr_05000 NC_012846.1 606207 606671 R RTX toxin-activating protein complement(606207..606671) Bartonella grahamii as4aup 7997473 YP_002971505.1 CDS Bgr_05020 NC_012846.1 607987 609699 R toxin secretion protein, HlyB family complement(607987..609699) Bartonella grahamii as4aup 7997475 YP_002971506.1 CDS Bgr_05030 NC_012846.1 609908 610336 D hypothetical protein 609908..610336 Bartonella grahamii as4aup 7997476 YP_002971507.1 CDS Bgr_05040 NC_012846.1 610366 610659 D hypothetical protein 610366..610659 Bartonella grahamii as4aup 7997477 YP_002971508.1 CDS Bgr_05050 NC_012846.1 611533 611838 D hypothetical protein 611533..611838 Bartonella grahamii as4aup 7997478 YP_002971509.1 CDS Bgr_05060 NC_012846.1 612961 613746 R hypothetical membrane protein complement(612961..613746) Bartonella grahamii as4aup 7997479 YP_002971510.1 CDS Bgr_05070 NC_012846.1 614276 614815 R hypothetical protein complement(614276..614815) Bartonella grahamii as4aup 7997480 YP_002971511.1 CDS Bgr_05080 NC_012846.1 614808 615404 R hypothetical protein complement(614808..615404) Bartonella grahamii as4aup 7997481 YP_002971512.1 CDS mrcA1 NC_012846.1 615422 617572 R penicillin-binding protein complement(615422..617572) Bartonella grahamii as4aup 7997482 YP_002971513.1 CDS Bgr_05100 NC_012846.1 617921 618157 D hypothetical protein 617921..618157 Bartonella grahamii as4aup 7997483 YP_002971514.1 CDS feuP NC_012846.1 618179 618844 D two-component system regulatory protein 618179..618844 Bartonella grahamii as4aup 7997484 YP_002971515.1 CDS feuQ NC_012846.1 618844 620262 D sensor histidine kinase 618844..620262 Bartonella grahamii as4aup 7997485 YP_002971516.1 CDS cycH NC_012846.1 620508 621281 D cytochrome c-type biogenesis protein CycH 620508..621281 Bartonella grahamii as4aup 7997486 YP_002971517.1 CDS cycJ NC_012846.1 621580 622059 D CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane; cytochrome c-type biogenesis protein CcmE 621580..622059 Bartonella grahamii as4aup 7997487 YP_002971518.1 CDS cycK NC_012846.1 622067 624046 D cytochrome c-type biogenesis protein CycK 622067..624046 Bartonella grahamii as4aup 7997488 YP_002971519.1 CDS cycL NC_012846.1 624048 624500 D cytochrome c-type biogenesis protein CycL 624048..624500 Bartonella grahamii as4aup 7997489 YP_002971520.1 CDS htrA1 NC_012846.1 624687 626198 D serine protease 624687..626198 Bartonella grahamii as4aup 7997490 YP_002971521.1 CDS Bgr_05180 NC_012846.1 626271 626957 D two-component response regulator 626271..626957 Bartonella grahamii as4aup 7997491 YP_002971522.1 CDS Bgr_05190 NC_012846.1 626954 628336 D sensor histidine kinase 626954..628336 Bartonella grahamii as4aup 7997492 YP_002971523.1 CDS glnE NC_012846.1 628414 631359 D catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 628414..631359 Bartonella grahamii as4aup 7997493 YP_002971524.1 CDS hbpD NC_012846.1 632046 632864 D hemin binding protein D 632046..632864 Bartonella grahamii as4aup 7997494 YP_002971525.1 CDS Bgr_05230 NC_012846.1 634307 635197 R hypothetical protein complement(634307..635197) Bartonella grahamii as4aup 7997496 YP_002971526.1 CDS Bgr_05240 NC_012846.1 636093 638189 R hypothetical membrane protein complement(636093..638189) Bartonella grahamii as4aup 7997497 YP_002971527.1 CDS Bgr_05250 NC_012846.1 638186 640984 R hypothetical protein complement(638186..640984) Bartonella grahamii as4aup 7997498 YP_002971528.1 CDS Bgr_05260 NC_012846.1 640981 641892 R hypothetical protein complement(640981..641892) Bartonella grahamii as4aup 7997499 YP_002971529.1 CDS Bgr_05270 NC_012846.1 641893 642924 R MoxR-like ATPase complement(641893..642924) Bartonella grahamii as4aup 7997500 YP_002971530.1 CDS pcnB NC_012846.1 643173 644429 D tRNA nucleotidyltransferase 643173..644429 Bartonella grahamii as4aup 7997501 YP_002971531.1 CDS Bgr_05290 NC_012846.1 645024 645500 R tRNA/rRNA methyltransferase complement(645024..645500) Bartonella grahamii as4aup 7997502 YP_002971532.1 CDS fbcF NC_012846.1 646231 646779 D ubiquinol-cytochrome c reductase, iron-sulfur subunit 646231..646779 Bartonella grahamii as4aup 7997503 YP_002971533.1 CDS fbcB NC_012846.1 646784 648040 D ubiquinol-cytochrome c reductase cytochrome b subunit 646784..648040 Bartonella grahamii as4aup 7997504 YP_002971534.1 CDS Bgr_05320 NC_012846.1 647980 648927 D ubiquinol-cytochrome c reductase, cytochrome c1 647980..648927 Bartonella grahamii as4aup 7997505 YP_002971535.1 CDS Bgr_05330 NC_012846.1 649041 649481 D PRC-barrel domain; hypothetical protein 649041..649481 Bartonella grahamii as4aup 7997506 YP_002971536.1 CDS Bgr_05340 NC_012846.1 649638 650741 R translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD complement(649638..650741) Bartonella grahamii as4aup 7997507 YP_002971537.1 CDS Bgr_05350 NC_012846.1 651006 651749 D ErfK/YbiS/YcfS/YnhG family protein 651006..651749 Bartonella grahamii as4aup 7997508 YP_002971538.1 CDS pth NC_012846.1 651991 652572 R Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase complement(651991..652572) Bartonella grahamii as4aup 7997509 YP_002971539.1 CDS rplY NC_012846.1 652649 653278 R the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc complement(652649..653278) Bartonella grahamii as4aup 7997510 YP_002971540.1 CDS Bgr_05380 NC_012846.1 653571 655070 D hypothetical protein 653571..655070 Bartonella grahamii as4aup 7997511 YP_002971541.1 CDS prsA NC_012846.1 655067 655999 R catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase complement(655067..655999) Bartonella grahamii as4aup 7997512 YP_002971542.1 CDS Bgr_05400 NC_012846.1 656481 657272 R hypothetical protein complement(656481..657272) Bartonella grahamii as4aup 7997513 YP_002971543.1 CDS Bgr_05410 NC_012846.1 657375 658454 R hypothetical protein complement(657375..658454) Bartonella grahamii as4aup 7997514 YP_002971544.1 CDS lgt NC_012846.1 658429 659307 R transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase complement(658429..659307) Bartonella grahamii as4aup 7997515 YP_002971545.1 CDS Bgr_05430 NC_012846.1 659613 659882 D hypothetical protein 659613..659882 Bartonella grahamii as4aup 7997516 YP_002971546.1 CDS Bgr_05450 NC_012846.1 660264 660764 D hypothetical protein 660264..660764 Bartonella grahamii as4aup 7997518 YP_002971547.1 CDS envZ NC_012846.1 660810 662150 R sensor histidine kinase EnvZ complement(660810..662150) Bartonella grahamii as4aup 7997519 YP_002971548.1 CDS ompR NC_012846.1 662159 662863 R transcriptional regulator OmpR complement(662159..662863) Bartonella grahamii as4aup 7997520 YP_002971549.1 CDS Bgr_05480 NC_012846.1 663006 663656 D metallo-beta-lactamase family protein 663006..663656 Bartonella grahamii as4aup 7997521 YP_002971550.1 CDS Bgr_05490 NC_012846.1 663722 664489 R hypothetical protein complement(663722..664489) Bartonella grahamii as4aup 7997522 YP_002971551.1 CDS uvrB1 NC_012846.1 664919 666049 R excinuclease ABC subunit B complement(664919..666049) Bartonella grahamii as4aup 7997523 YP_002971552.1 CDS Bgr_05510 NC_012846.1 666234 666716 R hypothetical protein complement(666234..666716) Bartonella grahamii as4aup 7997524 YP_002971553.1 CDS uvrB2 NC_012846.1 667585 669894 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B complement(667585..669894) Bartonella grahamii as4aup 7997525 YP_002971554.1 CDS Bgr_05530 NC_012846.1 670154 670468 R SH3 domain; hypothetical protein complement(670154..670468) Bartonella grahamii as4aup 7997526 YP_002971555.1 CDS greA NC_012846.1 670807 671280 D necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 670807..671280 Bartonella grahamii as4aup 7997527 YP_002971556.1 CDS lpcC NC_012846.1 671298 672356 D lipopolysaccharide core biosynthesis mannosyltransferase LpcC 671298..672356 Bartonella grahamii as4aup 7997528 YP_002971557.1 CDS trkH NC_012846.1 673510 674916 R trk system potassium uptake protein TrkH complement(673510..674916) Bartonella grahamii as4aup 7997529 YP_002971558.1 CDS trxB NC_012846.1 675217 676173 D thioredoxin reductase TrxB 675217..676173 Bartonella grahamii as4aup 7997530 YP_002971559.1 CDS Bgr_05580 NC_012846.1 676216 677121 D LysR family transcriptional regulator 676216..677121 Bartonella grahamii as4aup 7997531 YP_002971560.1 CDS aatA NC_012846.1 678270 679472 R catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase complement(678270..679472) Bartonella grahamii as4aup 7997532 YP_002971561.1 CDS cspA NC_012846.1 679794 680003 R cold shock protein complement(679794..680003) Bartonella grahamii as4aup 7997533 YP_002971562.1 CDS carB NC_012846.1 680249 683734 R four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit complement(680249..683734) Bartonella grahamii as4aup 7997534 YP_002971563.1 CDS Bgr_05630 NC_012846.1 684552 685076 D methyltransferase (fragment) 684552..685076 Bartonella grahamii as4aup 7997536 YP_002971564.1 CDS Bgr_05640 NC_012846.1 685073 687394 R two-component sensor histidine kinase complement(685073..687394) Bartonella grahamii as4aup 7997537 YP_002971565.1 CDS pepN NC_012846.1 687680 690307 R aminopeptidase N complement(687680..690307) Bartonella grahamii as4aup 7997538 YP_002971566.1 CDS Bgr_05660 NC_012846.1 690377 691207 R phage SPO1 DNA polymerase-related protein complement(690377..691207) Bartonella grahamii as4aup 7997539 YP_002971567.1 CDS thiD1 NC_012846.1 691680 692438 R phosphomethylpyrimidine kinase ThiD1 complement(691680..692438) Bartonella grahamii as4aup 7997540 YP_002971568.1 CDS thiE NC_012846.1 692429 693034 R Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate; thiamine-phosphate pyrophosphorylase complement(692429..693034) Bartonella grahamii as4aup 7997541 YP_002971569.1 CDS thiG NC_012846.1 693031 693804 R functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase complement(693031..693804) Bartonella grahamii as4aup 7997542 YP_002971570.1 CDS thiS NC_012846.1 693809 694006 R with ThiF, ThiG, and ThiO catalyzes the formation of the thiazole moiety of thiamine pyrophosphate; sulfur carrier protein ThiS complement(693809..694006) Bartonella grahamii as4aup 7997543 YP_002971571.1 CDS thiO NC_012846.1 694010 694960 R thiamine biosynthesis oxidoreductase ThiO complement(694010..694960) Bartonella grahamii as4aup 7997544 YP_002971572.1 CDS thiC NC_012846.1 694957 696792 R required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC complement(694957..696792) Bartonella grahamii as4aup 7997545 YP_002971573.1 CDS Bgr_05740 NC_012846.1 699472 700446 D phage tail protein 699472..700446 Bartonella grahamii as4aup 7997547 YP_002971574.1 CDS hmuV NC_012846.1 701188 702021 R with HmuTU is involved in the transport of hemin; hemin importer ATP-binding subunit complement(701188..702021) Bartonella grahamii as4aup 7997548 YP_002971575.1 CDS hmuU NC_012846.1 702018 703115 R hemin ABC transporter, permease protein complement(702018..703115) Bartonella grahamii as4aup 7997549 YP_002971576.1 CDS hmuT NC_012846.1 703121 704023 R hemin ABC transporter, periplasmic hemin-binding protein complement(703121..704023) Bartonella grahamii as4aup 7997550 YP_002971577.1 CDS hmuS NC_012846.1 704042 705085 R hemin degrading protein complement(704042..705085) Bartonella grahamii as4aup 7997551 YP_002971578.1 CDS hmuR NC_012846.1 705357 707540 R outer membrane hemin receptor complement(705357..707540) Bartonella grahamii as4aup 7997552 YP_002971579.1 CDS tonB NC_012846.1 707786 708538 D TonB protein 707786..708538 Bartonella grahamii as4aup 7997553 YP_002971580.1 CDS slt NC_012846.1 709561 711651 R soluble lytic murein transglycosylase precursor complement(709561..711651) Bartonella grahamii as4aup 7997554 YP_002971581.1 CDS dapA NC_012846.1 711903 712787 D catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 711903..712787 Bartonella grahamii as4aup 7997555 YP_002971582.1 CDS smpB NC_012846.1 712806 713282 D binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 712806..713282 Bartonella grahamii as4aup 7997556 YP_002971583.1 CDS Bgr_05850 NC_012846.1 713332 714012 R uracil-DNA glycosylase family protein complement(713332..714012) Bartonella grahamii as4aup 7997557 YP_002971584.1 CDS rpoZ NC_012846.1 714558 714956 D Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega 714558..714956 Bartonella grahamii as4aup 7997558 YP_002971585.1 CDS spoT NC_012846.1 715084 717309 D GTP pyrophosphokinase 715084..717309 Bartonella grahamii as4aup 7997559 YP_002971586.1 CDS pyrE NC_012846.1 717326 717904 D involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 717326..717904 Bartonella grahamii as4aup 7997560 YP_002971587.1 CDS Bgr_05890 NC_012846.1 717999 718589 D hypothetical protein 717999..718589 Bartonella grahamii as4aup 7997561 YP_002971588.1 CDS acpS NC_012846.1 718610 719011 D Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 718610..719011 Bartonella grahamii as4aup 7997562 YP_002971589.1 CDS lebB NC_012846.1 719091 719903 D signal peptidase I 719091..719903 Bartonella grahamii as4aup 7997563 YP_002971590.1 CDS rnc NC_012846.1 719884 720591 D cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 719884..720591 Bartonella grahamii as4aup 7997564 YP_002971591.1 CDS era NC_012846.1 720584 721489 D Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 720584..721489 Bartonella grahamii as4aup 7997565 YP_002971592.1 CDS recO NC_012846.1 721515 722261 D involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO 721515..722261 Bartonella grahamii as4aup 7997566 YP_002971593.1 CDS panC NC_012846.1 722285 723145 D catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 722285..723145 Bartonella grahamii as4aup 7997567 YP_002971594.1 CDS panB NC_012846.1 723142 723957 D catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 723142..723957 Bartonella grahamii as4aup 7997568 YP_002971595.1 CDS Bgr_05980 NC_012846.1 724473 725090 R hypothetical protein complement(724473..725090) Bartonella grahamii as4aup 7997570 YP_002971596.1 CDS Bgr_05990 NC_012846.1 725083 725955 R aminomethyltransferase complement(725083..725955) Bartonella grahamii as4aup 7997571 YP_002971597.1 CDS pyrC1 NC_012846.1 726020 727348 D Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase 726020..727348 Bartonella grahamii as4aup 7997572 YP_002971598.1 CDS Bgr_06010 NC_012846.1 727764 728132 R hypothetical protein complement(727764..728132) Bartonella grahamii as4aup 7997573 YP_002971599.1 CDS cysS NC_012846.1 728635 730143 D catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 728635..730143 Bartonella grahamii as4aup 7997574 YP_002971600.1 CDS Bgr_06030 NC_012846.1 730189 730860 D hypothetical membrane protein 730189..730860 Bartonella grahamii as4aup 7997575 YP_002971601.1 CDS Bgr_06040 NC_012846.1 730977 732860 D ABC transporter ATP-binding protein 730977..732860 Bartonella grahamii as4aup 7997576 YP_002971602.1 CDS psdA NC_012846.1 732978 733676 D catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase 732978..733676 Bartonella grahamii as4aup 7997577 YP_002971603.1 CDS pssA NC_012846.1 733685 734524 D phosphatidylserine synthase 733685..734524 Bartonella grahamii as4aup 7997578 YP_002971604.1 CDS Bgr_06070 NC_012846.1 734595 735344 R oxidoreductase, short-chain dehydrogenase/reductase family complement(734595..735344) Bartonella grahamii as4aup 7997579 YP_002971605.1 CDS purF NC_012846.1 735347 736837 R Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase complement(735347..736837) Bartonella grahamii as4aup 7997580 YP_002971606.1 CDS cvpA NC_012846.1 736916 737497 R colicin V production protein complement(736916..737497) Bartonella grahamii as4aup 7997581 YP_002971607.1 CDS radA NC_012846.1 737625 739001 R Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA complement(737625..739001) Bartonella grahamii as4aup 7997582 YP_002971608.1 CDS dnaB1 NC_012846.1 739008 740498 R unwinds double stranded DNA; replicative DNA helicase complement(739008..740498) Bartonella grahamii as4aup 7997583 YP_002971609.1 CDS rplI NC_012846.1 741092 741688 R in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 complement(741092..741688) Bartonella grahamii as4aup 7997584 YP_002971610.1 CDS Bgr_06130 NC_012846.1 741714 742694 R hypothetical protein complement(741714..742694) Bartonella grahamii as4aup 7997585 YP_002971611.1 CDS rpsR NC_012846.1 742845 743093 R binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 complement(742845..743093) Bartonella grahamii as4aup 7997586 YP_002971612.1 CDS rpsF NC_012846.1 743093 743500 R binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 complement(743093..743500) Bartonella grahamii as4aup 7997587 YP_002971613.1 CDS Bgr_06160 NC_012846.1 743832 744419 D putative membrane-associated phosphatase 743832..744419 Bartonella grahamii as4aup 7997588 YP_002971614.1 CDS fabD NC_012846.1 744497 745441 D malonyl CoA-acyl carrier protein transacylase FabD 744497..745441 Bartonella grahamii as4aup 7997589 YP_002971615.1 CDS fabG NC_012846.1 745460 746197 D catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 745460..746197 Bartonella grahamii as4aup 7997590 YP_002971616.1 CDS acpP NC_012846.1 746459 746695 D carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 746459..746695 Bartonella grahamii as4aup 7997591 YP_002971617.1 CDS fabF1 NC_012846.1 746797 748059 D FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II 746797..748059 Bartonella grahamii as4aup 7997592 YP_002971618.1 CDS Bgr_06210 NC_012846.1 748156 749265 D aminodeoxychorismate lyase 748156..749265 Bartonella grahamii as4aup 7997593 YP_002971619.1 CDS gmk NC_012846.1 749565 750242 D Essential for recycling GMP and indirectly, cGMP; guanylate kinase 749565..750242 Bartonella grahamii as4aup 7997594 YP_002971620.1 CDS ksgA NC_012846.1 750273 751103 R catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase complement(750273..751103) Bartonella grahamii as4aup 7997595 YP_002971621.1 CDS pdxA NC_012846.1 751094 752107 R catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase complement(751094..752107) Bartonella grahamii as4aup 7997596 YP_002971622.1 CDS Bgr_06250 NC_012846.1 752107 753081 R peptidyl-prolyl cis-trans isomerase complement(752107..753081) Bartonella grahamii as4aup 7997597 YP_002971623.1 CDS Bgr_06260 NC_012846.1 753225 755414 R organic solvent tolerance protein OstA complement(753225..755414) Bartonella grahamii as4aup 7997598 YP_002971624.1 CDS Bgr_06270 NC_012846.1 755535 756626 R putative permease, YjgP/YjgQ family complement(755535..756626) Bartonella grahamii as4aup 7997599 YP_002971625.1 CDS Bgr_06280 NC_012846.1 756623 757813 R putative permease, YjgP/YjgQ family complement(756623..757813) Bartonella grahamii as4aup 7997600 YP_002971626.1 CDS Bgr_06290 NC_012846.1 758211 758657 D binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB; DNA polymerase III subunit chi 758211..758657 Bartonella grahamii as4aup 7997601 YP_002971627.1 CDS Bgr_06300 NC_012846.1 758657 758833 D hypothetical protein 758657..758833 Bartonella grahamii as4aup 7997602 YP_002971628.1 CDS Bgr_06310 NC_012846.1 758823 759086 D hypothetical membrane protein 758823..759086 Bartonella grahamii as4aup 7997603 YP_002971629.1 CDS yhjE NC_012846.1 759083 760402 R permease, MFS superfamily complement(759083..760402) Bartonella grahamii as4aup 7997604 YP_002971630.1 CDS Bgr_06330 NC_012846.1 760913 766477 D pertactin family virulence factor/autotransporter 760913..766477 Bartonella grahamii as4aup 7997605 YP_002971631.1 CDS Bgr_06340 NC_012846.1 766840 769404 D pertactin family virulence factor/autotransporter 766840..769404 Bartonella grahamii as4aup 7997606 YP_002971632.1 CDS Bgr_06350 NC_012846.1 769811 772399 D pertactin family virulence factor/autotransporter 769811..772399 Bartonella grahamii as4aup 7997607 YP_002971633.1 CDS ndk NC_012846.1 772793 773215 D catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 772793..773215 Bartonella grahamii as4aup 7997608 YP_002971634.1 CDS pgsA NC_012846.1 773551 774132 R CDP-diacylglycerol-glycerol-3-phosphate 3- phosphatidyltransferase complement(773551..774132) Bartonella grahamii as4aup 7997609 YP_002971635.1 CDS uvrC NC_012846.1 774205 776184 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C complement(774205..776184) Bartonella grahamii as4aup 7997610 YP_002971636.1 CDS Bgr_06390 NC_012846.1 776582 777445 R putative DNA methylase protein complement(776582..777445) Bartonella grahamii as4aup 7997611 YP_002971637.1 CDS tatA NC_012846.1 779079 779390 D twin-arginine translocation protein TatA 779079..779390 Bartonella grahamii as4aup 7997612 YP_002971638.1 CDS tatB NC_012846.1 779446 779850 D twin-arginine translocation protein TatB 779446..779850 Bartonella grahamii as4aup 7997613 YP_002971639.1 CDS tatC NC_012846.1 779847 780629 D twin-arginine translocation protein TatC 779847..780629 Bartonella grahamii as4aup 7997614 YP_002971640.1 CDS serS NC_012846.1 780689 781966 D catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 780689..781966 Bartonella grahamii as4aup 7997615 YP_002971641.1 CDS pcm NC_012846.1 782100 782759 D catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins; protein-L-isoaspartate O-methyltransferase 782100..782759 Bartonella grahamii as4aup 7997616 YP_002971642.1 CDS Bgr_06450 NC_012846.1 782915 784096 D putative virulence determinant 782915..784096 Bartonella grahamii as4aup 7997617 YP_002971643.1 CDS Bgr_06460 NC_012846.1 784782 785234 D preprotein translocase YajC subunit 784782..785234 Bartonella grahamii as4aup 7997618 YP_002971644.1 CDS Bgr_06470 NC_012846.1 785695 786081 D hypothetical outer membrane protein 785695..786081 Bartonella grahamii as4aup 7997619 YP_002971645.1 CDS Bgr_06480 NC_012846.1 786957 787817 D phytoene synthase 786957..787817 Bartonella grahamii as4aup 7997620 YP_002971646.1 CDS ppiD NC_012846.1 788544 790433 R peptidyl-prolyl cis-trans isomerase complement(788544..790433) Bartonella grahamii as4aup 7997621 YP_002971647.1 CDS tpiA NC_012846.1 790588 791352 D Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 790588..791352 Bartonella grahamii as4aup 7997622 YP_002971648.1 CDS secG NC_012846.1 791435 791887 D preprotein translocase subunit SecG 791435..791887 Bartonella grahamii as4aup 7997623 YP_002971649.1 CDS pyrG NC_012846.1 792014 793642 D CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 792014..793642 Bartonella grahamii as4aup 7997624 YP_002971650.1 CDS kdsA NC_012846.1 793679 794515 D catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 793679..794515 Bartonella grahamii as4aup 7997625 YP_002971651.1 CDS eno NC_012846.1 794587 795858 D enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 794587..795858 Bartonella grahamii as4aup 7997626 YP_002971652.1 CDS Bgr_06550 NC_012846.1 795970 796377 D hypothetical membrane protein 795970..796377 Bartonella grahamii as4aup 7997627 YP_002971653.1 CDS Bgr_06570 NC_012846.1 797306 797617 D septum formation initiator protein 797306..797617 Bartonella grahamii as4aup 7997629 YP_002971654.1 CDS pdhA NC_012846.1 797753 798793 D pyruvate dehydrogenase subunit alpha 797753..798793 Bartonella grahamii as4aup 7997630 YP_002971655.1 CDS pdhB NC_012846.1 798810 800174 D catalyzes the oxidative decarboxylation of pyruvate with concomitant acetylation of a lipoic acid-containing dihydrolipoamide acetyltransferase within the complex. The E1 component of the pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase(E2) and lipoamide dehydrogenase; pyruvate dehydrogenase subunit beta 798810..800174 Bartonella grahamii as4aup 7997631 YP_002971656.1 CDS pdhC NC_012846.1 800189 801532 D branched-chain alpha-keto acid dehydrogenase subunit E2 800189..801532 Bartonella grahamii as4aup 7997632 YP_002971657.1 CDS pdhD1 NC_012846.1 801753 803213 D E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 801753..803213 Bartonella grahamii as4aup 7997633 YP_002971658.1 CDS lipA NC_012846.1 803281 804243 D catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 803281..804243 Bartonella grahamii as4aup 7997634 YP_002971659.1 CDS Bgr_06630 NC_012846.1 804246 804707 D hypothetical protein 804246..804707 Bartonella grahamii as4aup 7997635 YP_002971660.1 CDS cinA NC_012846.1 805248 805736 R competence/damage-inducible protein CinA complement(805248..805736) Bartonella grahamii as4aup 7997636 YP_002971661.1 CDS ispDF NC_012846.1 805733 806809 R IspD/IspF bifunctional enzyme complement(805733..806809) Bartonella grahamii as4aup 7997637 YP_002971662.1 CDS rirA NC_012846.1 806947 807390 R rhizobial iron regulator; in Sinorhizobium meliloti mutations in this gene affect the expression of a number of iron-responsive operons; iron-responsive transcriptional regulator complement(806947..807390) Bartonella grahamii as4aup 7997638 YP_002971663.1 CDS ntrY NC_012846.1 807563 809830 D nitrogen regulation protein NtrY 807563..809830 Bartonella grahamii as4aup 7997639 YP_002971664.1 CDS ntrX NC_012846.1 809832 811190 D nitrogen regulation protein NtrX 809832..811190 Bartonella grahamii as4aup 7997640 YP_002971665.1 CDS trkA NC_012846.1 811195 812571 D involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; potassium transporter peripheral membrane component 811195..812571 Bartonella grahamii as4aup 7997641 YP_002971666.1 CDS Bgr_06700 NC_012846.1 812582 813256 D hypothetical protein 812582..813256 Bartonella grahamii as4aup 7997642 YP_002971667.1 CDS clpP NC_012846.1 813537 814169 D hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 813537..814169 Bartonella grahamii as4aup 7997643 YP_002971668.1 CDS clpX NC_012846.1 814353 815627 D binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 814353..815627 Bartonella grahamii as4aup 7997644 YP_002971669.1 CDS lon1 NC_012846.1 815811 818237 D ATP-dependent protease 815811..818237 Bartonella grahamii as4aup 7997645 YP_002971670.1 CDS hupB NC_012846.1 818469 818747 D DNA-binding protein 818469..818747 Bartonella grahamii as4aup 7997646 YP_002971671.1 CDS gidA1 NC_012846.1 819852 821264 R TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine; tRNA (uracil-5-)-methyltransferase Gid complement(819852..821264) Bartonella grahamii as4aup 7997647 YP_002971672.1 CDS tig NC_012846.1 821617 823044 D Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 821617..823044 Bartonella grahamii as4aup 7997649 YP_002971673.1 CDS gatB NC_012846.1 823173 824672 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 823173..824672 Bartonella grahamii as4aup 7997650 YP_002971674.1 CDS Bgr_06790 NC_012846.1 824854 825252 D Provides the input to the respiratory chain from the NAD-linked dehydrogenases of the citric acid cycle. The complex couples the oxidation of NADH and the reduction of ubiquinone, to the generation of a proton gradient which is then used for ATP synthesis; NADH dehydrogenase 824854..825252 Bartonella grahamii as4aup 7997651 YP_002971675.1 CDS Bgr_06800 NC_012846.1 825341 825766 D hypothetical protein 825341..825766 Bartonella grahamii as4aup 7997652 YP_002971676.1 CDS Bgr_06810 NC_012846.1 826661 827386 D hypothetical membrane protein, rhomboid family 826661..827386 Bartonella grahamii as4aup 7997653 YP_002971677.1 CDS Bgr_06820 NC_012846.1 827390 828220 R tRNA/rRNA methyltransferase complement(827390..828220) Bartonella grahamii as4aup 7997654 YP_002971678.1 CDS tuf1 NC_012846.1 828796 829971 D EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 828796..829971 Bartonella grahamii as4aup 7997657 YP_002971679.1 CDS secE NC_012846.1 830298 830510 D forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 830298..830510 Bartonella grahamii as4aup 7997659 YP_002971680.1 CDS nusG NC_012846.1 830531 831061 D Modulates Rho-dependent transcription termination; transcription antitermination protein NusG 830531..831061 Bartonella grahamii as4aup 7997660 YP_002971681.1 CDS rplK NC_012846.1 831211 831639 D binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 831211..831639 Bartonella grahamii as4aup 7997661 YP_002971682.1 CDS rplA NC_012846.1 831644 832348 D in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 831644..832348 Bartonella grahamii as4aup 7997662 YP_002971683.1 CDS rplJ NC_012846.1 832707 833225 D binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 832707..833225 Bartonella grahamii as4aup 7997663 YP_002971684.1 CDS rplL NC_012846.1 833327 833698 D present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 833327..833698 Bartonella grahamii as4aup 7997664 YP_002971685.1 CDS rpoB NC_012846.1 833990 838138 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 833990..838138 Bartonella grahamii as4aup 7997665 YP_002971686.1 CDS rpoC NC_012846.1 838311 842522 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 838311..842522 Bartonella grahamii as4aup 7997666 YP_002971687.1 CDS Bgr_06950 NC_012846.1 843068 843454 D transcriptional regulator, MerR family 843068..843454 Bartonella grahamii as4aup 7997667 YP_002971688.1 CDS pnbA NC_012846.1 843663 844352 D nitroreductase 843663..844352 Bartonella grahamii as4aup 7997668 YP_002971689.1 CDS sdaA NC_012846.1 844698 846089 D L-serine dehydratase 844698..846089 Bartonella grahamii as4aup 7997669 YP_002971690.1 CDS Bgr_06990 NC_012846.1 847834 848112 R hypothetical protein complement(847834..848112) Bartonella grahamii as4aup 7997671 YP_002971691.1 CDS dacA1 NC_012846.1 848145 849494 R penicillin-binding protein complement(848145..849494) Bartonella grahamii as4aup 7997672 YP_002971692.1 CDS clpS NC_012846.1 849768 850100 D ATP-dependent Clp protease adaptor protein ClpS 849768..850100 Bartonella grahamii as4aup 7997673 YP_002971693.1 CDS clpA NC_012846.1 850107 852458 D endopeptidase Clp ATP-binding chain A 850107..852458 Bartonella grahamii as4aup 7997674 YP_002971694.1 CDS Bgr_07030 NC_012846.1 852466 852888 R HIT family protein complement(852466..852888) Bartonella grahamii as4aup 7997675 YP_002971695.1 CDS Bgr_07040 NC_012846.1 853023 853484 R endoribonuclease family protein complement(853023..853484) Bartonella grahamii as4aup 7997676 YP_002971696.1 CDS Bgr_07050 NC_012846.1 853630 854466 D hypothetical protein 853630..854466 Bartonella grahamii as4aup 7997677 YP_002971697.1 CDS rpsB NC_012846.1 854634 855413 D one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 854634..855413 Bartonella grahamii as4aup 7997678 YP_002971698.1 CDS tsf NC_012846.1 855516 856439 D EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 855516..856439 Bartonella grahamii as4aup 7997679 YP_002971699.1 CDS pyrH NC_012846.1 856597 857316 D Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 856597..857316 Bartonella grahamii as4aup 7997680 YP_002971700.1 CDS frr NC_012846.1 857354 857914 D Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 857354..857914 Bartonella grahamii as4aup 7997681 YP_002971701.1 CDS cdsA1 NC_012846.1 858647 859462 D phosphatidate cytidylyltransferase 858647..859462 Bartonella grahamii as4aup 7997682 YP_002971702.1 CDS Bgr_07110 NC_012846.1 859478 860626 D membrane-associated zinc metalloprotease 859478..860626 Bartonella grahamii as4aup 7997683 YP_002971703.1 CDS omp89 NC_012846.1 860830 863226 D outer membrane protein 860830..863226 Bartonella grahamii as4aup 7997684 YP_002971704.1 CDS lpxD NC_012846.1 863292 864338 D adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 863292..864338 Bartonella grahamii as4aup 7997685 YP_002971705.1 CDS fabZ NC_012846.1 864340 864807 D in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 864340..864807 Bartonella grahamii as4aup 7997686 YP_002971706.1 CDS lpxA NC_012846.1 864832 865656 D catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase 864832..865656 Bartonella grahamii as4aup 7997687 YP_002971707.1 CDS cdsA2 NC_012846.1 865659 866531 D phosphatidate cytidyltransferase 865659..866531 Bartonella grahamii as4aup 7997688 YP_002971708.1 CDS lpxB NC_012846.1 866524 867720 D catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; lipid-A-disaccharide synthase 866524..867720 Bartonella grahamii as4aup 7997689 YP_002971709.1 CDS Bgr_07180 NC_012846.1 867741 868514 R amino-acid ABC transporter, ATP-binding protein complement(867741..868514) Bartonella grahamii as4aup 7997690 YP_002971710.1 CDS Bgr_07190 NC_012846.1 868593 869300 R amino acid ABC transporter permease complement(868593..869300) Bartonella grahamii as4aup 7997691 YP_002971711.1 CDS Bgr_07200 NC_012846.1 869297 870019 R amino acid ABC transporter permease complement(869297..870019) Bartonella grahamii as4aup 7997692 YP_002971712.1 CDS Bgr_07210 NC_012846.1 870099 870851 R amino acid ABC transporter substrate-binding protein complement(870099..870851) Bartonella grahamii as4aup 7997693 YP_002971713.1 CDS Bgr_07220 NC_012846.1 871346 872098 R amino acid ABC transporter substrate-binding protein complement(871346..872098) Bartonella grahamii as4aup 7997694 YP_002971714.1 CDS gltA NC_012846.1 872827 874122 R type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; type II citrate synthase complement(872827..874122) Bartonella grahamii as4aup 7997695 YP_002971715.1 CDS gltX NC_012846.1 874386 875816 R Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase complement(874386..875816) Bartonella grahamii as4aup 7997696 YP_002971716.1 CDS Bgr_07250 NC_012846.1 875929 878193 D ComEC/Rec2-related protein 875929..878193 Bartonella grahamii as4aup 7997697 YP_002971717.1 CDS rpiA NC_012846.1 878675 879379 D Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A 878675..879379 Bartonella grahamii as4aup 7997698 YP_002971718.1 CDS Bgr_07270 NC_012846.1 879491 880060 D hypothetical protein 879491..880060 Bartonella grahamii as4aup 7997699 YP_002971719.1 CDS gor NC_012846.1 880266 881657 D catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense; glutathione reductase 880266..881657 Bartonella grahamii as4aup 7997700 YP_002971720.1 CDS Bgr_07290 NC_012846.1 881726 883105 D 2-dehydro-3-deoxyphosphoheptonatealdolase 881726..883105 Bartonella grahamii as4aup 7997701 YP_002971721.1 CDS nadE NC_012846.1 883213 884889 D NH(3)-dependent; catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 883213..884889 Bartonella grahamii as4aup 7997702 YP_002971722.1 CDS gltX2 NC_012846.1 884900 886273 D Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 884900..886273 Bartonella grahamii as4aup 7997703 YP_002971723.1 CDS Bgr_07320 NC_012846.1 886332 887735 R ATP-dependent RNA helicase, DEAD/DEAH box family complement(886332..887735) Bartonella grahamii as4aup 7997704 YP_002971724.1 CDS ppnK NC_012846.1 887882 888655 R catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase complement(887882..888655) Bartonella grahamii as4aup 7997705 YP_002971725.1 CDS Bgr_07350 NC_012846.1 889456 889812 D hypothetical membrane protein 889456..889812 Bartonella grahamii as4aup 7997707 YP_002971726.1 CDS Bgr_07370 NC_012846.1 890524 890649 D hypothetical protein 890524..890649 Bartonella grahamii as4aup 7997709 YP_002971727.1 CDS Bgr_07390 NC_012846.1 892211 892468 D hypothetical protein 892211..892468 Bartonella grahamii as4aup 7997711 YP_002971728.1 CDS Bgr_07400 NC_012846.1 892932 894497 R integral membrane protein TerC complement(892932..894497) Bartonella grahamii as4aup 7997712 YP_002971729.1 CDS Bgr_07430 NC_012846.1 896425 897378 R integral membrane protein complement(896425..897378) Bartonella grahamii as4aup 7997715 YP_002971730.1 CDS Bgr_07440 NC_012846.1 897394 899145 R potassium-efflux system protein complement(897394..899145) Bartonella grahamii as4aup 7997716 YP_002971731.1 CDS secD NC_012846.1 899245 901758 R part of the preprotein secretory system; forms a complex with protein YajC; SecDFyajC stimulates the proton motive force-driven protein translocation, seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; bifunctional preprotein translocase subunit SecD/SecF complement(899245..901758) Bartonella grahamii as4aup 7997717 YP_002971732.1 CDS Bgr_07460 NC_012846.1 901851 902228 R hypothetical protein complement(901851..902228) Bartonella grahamii as4aup 7997718 YP_002971733.1 CDS Bgr_07470 NC_012846.1 902412 904787 D mechanosensitive ion channel family protein 902412..904787 Bartonella grahamii as4aup 7997719 YP_002971734.1 CDS Bgr_07480 NC_012846.1 904781 905053 D hypothetical protein 904781..905053 Bartonella grahamii as4aup 7997720 YP_002971735.1 CDS hbpE NC_012846.1 905622 906614 D hemin binding protein E 905622..906614 Bartonella grahamii as4aup 7997721 YP_002971736.1 CDS Bgr_07520 NC_012846.1 907784 908062 D hypothetical protein 907784..908062 Bartonella grahamii as4aup 7997724 YP_002971737.1 CDS Bgr_07530 NC_012846.1 908043 908363 D putative transcriptional regulator 908043..908363 Bartonella grahamii as4aup 7997725 YP_002971738.1 CDS Bgr_07570 NC_012846.1 909666 910709 R phage-related integrase/recombinase complement(909666..910709) Bartonella grahamii as4aup 7997729 YP_002971739.1 CDS Bgr_07580 NC_012846.1 910716 910934 R hypothetical protein complement(910716..910934) Bartonella grahamii as4aup 7997730 YP_002971740.1 CDS Bgr_07590 NC_012846.1 911078 911620 R hypothetical protein complement(911078..911620) Bartonella grahamii as4aup 7997731 YP_002971741.1 CDS exo2 NC_012846.1 911636 912259 R phage-related exonuclease complement(911636..912259) Bartonella grahamii as4aup 7997732 YP_002971742.1 CDS bet NC_012846.1 912261 913088 R bacteriophage recombination protein complement(912261..913088) Bartonella grahamii as4aup 7997733 YP_002971743.1 CDS Bgr_07620 NC_012846.1 913162 913731 R phage related protein complement(913162..913731) Bartonella grahamii as4aup 7997734 YP_002971744.1 CDS Bgr_07630 NC_012846.1 913737 914126 R phage related protein complement(913737..914126) Bartonella grahamii as4aup 7997735 YP_002971745.1 CDS Bgr_07640 NC_012846.1 914123 914668 R phage related protein complement(914123..914668) Bartonella grahamii as4aup 7997736 YP_002971746.1 CDS Bgr_07650 NC_012846.1 914782 915162 R hypothetical protein complement(914782..915162) Bartonella grahamii as4aup 7997737 YP_002971747.1 CDS Bgr_07660 NC_012846.1 915384 915716 R hypothetical protein complement(915384..915716) Bartonella grahamii as4aup 7997738 YP_002971748.1 CDS Bgr_07670 NC_012846.1 915830 916111 D hypothetical protein 915830..916111 Bartonella grahamii as4aup 7997739 YP_002971749.1 CDS Bgr_07680 NC_012846.1 916122 916709 D phage related protein 916122..916709 Bartonella grahamii as4aup 7997740 YP_002971750.1 CDS Bgr_07690 NC_012846.1 917170 917793 R hypothetical protein complement(917170..917793) Bartonella grahamii as4aup 7997741 YP_002971751.1 CDS Bgr_07700 NC_012846.1 917940 918326 D phage related protein 917940..918326 Bartonella grahamii as4aup 7997742 YP_002971752.1 CDS Bgr_07710 NC_012846.1 918316 918681 D hypothetical protein 918316..918681 Bartonella grahamii as4aup 7997743 YP_002971753.1 CDS Bgr_07720 NC_012846.1 918671 919813 D hypothetical protein 918671..919813 Bartonella grahamii as4aup 7997744 YP_002971754.1 CDS Bgr_07730 NC_012846.1 920073 920402 D hypothetical protein 920073..920402 Bartonella grahamii as4aup 7997745 YP_002971755.1 CDS Bgr_07740 NC_012846.1 920389 920847 D hypothetical membrane protein 920389..920847 Bartonella grahamii as4aup 7997746 YP_002971756.1 CDS Bgr_07760 NC_012846.1 921184 921693 D anti-repressor protein 921184..921693 Bartonella grahamii as4aup 7997748 YP_002971757.1 CDS Bgr_07770 NC_012846.1 921775 922215 D phage related protein 921775..922215 Bartonella grahamii as4aup 7997749 YP_002971758.1 CDS dnaB2 NC_012846.1 922493 923941 D unwinds double stranded DNA; replicative DNA helicase 922493..923941 Bartonella grahamii as4aup 7997750 YP_002971759.1 CDS Bgr_07790 NC_012846.1 924030 924305 D single-strand binding protein (fragment) 924030..924305 Bartonella grahamii as4aup 7997751 YP_002971760.1 CDS Bgr_07800 NC_012846.1 925789 926568 R phage related protein complement(925789..926568) Bartonella grahamii as4aup 7997752 YP_002971761.1 CDS Bgr_07810 NC_012846.1 926660 927214 R phage related protein complement(926660..927214) Bartonella grahamii as4aup 7997753 YP_002971762.1 CDS Bgr_07820 NC_012846.1 927300 928070 R phage related protein complement(927300..928070) Bartonella grahamii as4aup 7997754 YP_002971763.1 CDS Bgr_07840 NC_012846.1 929570 934480 R helicase/methyltransferase complement(929570..934480) Bartonella grahamii as4aup 7997756 YP_002971764.1 CDS hec2 NC_012846.1 935296 937092 D hemolysin activator protein Hec 935296..937092 Bartonella grahamii as4aup 7997757 YP_002971765.1 CDS fhaB1 NC_012846.1 937118 945313 D filamentous hemagglutinin 937118..945313 Bartonella grahamii as4aup 7997758 YP_002971766.1 CDS Bgr_07870 NC_012846.1 945310 945717 D hypothetical protein 945310..945717 Bartonella grahamii as4aup 7997759 YP_002971767.1 CDS Bgr_07880 NC_012846.1 945941 946141 R hypothetical DNA-binding protein complement(945941..946141) Bartonella grahamii as4aup 7997760 YP_002971768.1 CDS Bgr_07890 NC_012846.1 946351 947553 R phage integrase complement(946351..947553) Bartonella grahamii as4aup 7997761 YP_002971769.1 CDS Bgr_07910 NC_012846.1 948264 948794 D hypothetical protein 948264..948794 Bartonella grahamii as4aup 7997763 YP_002971770.1 CDS Bgr_07920 NC_012846.1 948804 949427 R hypothetical protein complement(948804..949427) Bartonella grahamii as4aup 7997764 YP_002971771.1 CDS Bgr_07930 NC_012846.1 949632 949964 D hypothetical protein 949632..949964 Bartonella grahamii as4aup 7997765 YP_002971772.1 CDS Bgr_07940 NC_012846.1 949945 951279 D phage terminase, large subunit 949945..951279 Bartonella grahamii as4aup 7997766 YP_002971773.1 CDS Bgr_07950 NC_012846.1 951264 953273 D putative phage portal protein 951264..953273 Bartonella grahamii as4aup 7997767 YP_002971774.1 CDS Bgr_07960 NC_012846.1 953287 954180 D hypothetical protein 953287..954180 Bartonella grahamii as4aup 7997768 YP_002971775.1 CDS Bgr_07970 NC_012846.1 954274 955401 D hypothetical protein 954274..955401 Bartonella grahamii as4aup 7997769 YP_002971776.1 CDS Bgr_07980 NC_012846.1 955422 955802 D hypothetical protein 955422..955802 Bartonella grahamii as4aup 7997770 YP_002971777.1 CDS Bgr_07990 NC_012846.1 955814 956194 D hypothetical protein 955814..956194 Bartonella grahamii as4aup 7997771 YP_002971778.1 CDS Bgr_08000 NC_012846.1 956206 956538 D hypothetical protein 956206..956538 Bartonella grahamii as4aup 7997772 YP_002971779.1 CDS Bgr_08010 NC_012846.1 956605 956736 R hypothetical protein complement(956605..956736) Bartonella grahamii as4aup 7997773 YP_002971780.1 CDS Bgr_08020 NC_012846.1 957444 958223 R phage related protein complement(957444..958223) Bartonella grahamii as4aup 7997774 YP_002971781.1 CDS Bgr_08030 NC_012846.1 958334 958858 R phage related protein complement(958334..958858) Bartonella grahamii as4aup 7997775 YP_002971782.1 CDS Bgr_08040 NC_012846.1 958941 959774 R phage related protein complement(958941..959774) Bartonella grahamii as4aup 7997776 YP_002971783.1 CDS Bgr_08060 NC_012846.1 961421 966385 R helicase/methyltransferase complement(961421..966385) Bartonella grahamii as4aup 7997778 YP_002971784.1 CDS hec3 NC_012846.1 967021 968817 D hemolysin activator protein Hec 967021..968817 Bartonella grahamii as4aup 7997779 YP_002971785.1 CDS fhaB2 NC_012846.1 968843 976300 D filamentous hemagglutinin 968843..976300 Bartonella grahamii as4aup 7997780 YP_002971786.1 CDS Bgr_08100 NC_012846.1 977460 977879 D hypothetical protein 977460..977879 Bartonella grahamii as4aup 7997782 YP_002971787.1 CDS Bgr_08120 NC_012846.1 978072 978479 D hypothetical protein 978072..978479 Bartonella grahamii as4aup 7997784 YP_002971788.1 CDS Bgr_08140 NC_012846.1 979295 979699 D hypothetical protein 979295..979699 Bartonella grahamii as4aup 7997786 YP_002971789.1 CDS Bgr_08160 NC_012846.1 979882 980241 D hypothetical protein 979882..980241 Bartonella grahamii as4aup 7997788 YP_002971790.1 CDS Bgr_08170 NC_012846.1 980345 980545 R hypothetical protein complement(980345..980545) Bartonella grahamii as4aup 7997789 YP_002971791.1 CDS Bgr_08180 NC_012846.1 980756 981922 R phage integrase complement(980756..981922) Bartonella grahamii as4aup 7997790 YP_002971792.1 CDS Bgr_08190 NC_012846.1 982089 982499 D hypothetical protein 982089..982499 Bartonella grahamii as4aup 7997791 YP_002971793.1 CDS Bgr_08200 NC_012846.1 982501 983934 D hypothetical protein 982501..983934 Bartonella grahamii as4aup 7997792 YP_002971794.1 CDS Bgr_08210 NC_012846.1 984081 984404 R XRE family transcriptional regulator complement(984081..984404) Bartonella grahamii as4aup 7997793 YP_002971795.1 CDS Bgr_08220 NC_012846.1 984406 984708 R hypothetical protein complement(984406..984708) Bartonella grahamii as4aup 7997794 YP_002971796.1 CDS Bgr_08230 NC_012846.1 985325 986104 R phage related protein complement(985325..986104) Bartonella grahamii as4aup 7997795 YP_002971797.1 CDS Bgr_08240 NC_012846.1 986215 986799 R phage related protein complement(986215..986799) Bartonella grahamii as4aup 7997796 YP_002971798.1 CDS Bgr_08250 NC_012846.1 986877 987710 R phage related protein complement(986877..987710) Bartonella grahamii as4aup 7997797 YP_002971799.1 CDS dinJ1 NC_012846.1 989045 989317 R DNA-damage-inducible protein J complement(989045..989317) Bartonella grahamii as4aup 7997800 YP_002971800.1 CDS hec4 NC_012846.1 990307 992067 D hemolysin activator protein Hec 990307..992067 Bartonella grahamii as4aup 7997802 YP_002971801.1 CDS fhaB3 NC_012846.1 992158 1000668 D filamentous hemagglutinin 992158..1000668 Bartonella grahamii as4aup 7997803 YP_002971802.1 CDS Bgr_08320 NC_012846.1 1000689 1001159 D hypothetical protein 1000689..1001159 Bartonella grahamii as4aup 7997804 YP_002971803.1 CDS Bgr_08330 NC_012846.1 1001156 1001620 D hypothetical protein 1001156..1001620 Bartonella grahamii as4aup 7997805 YP_002971804.1 CDS Bgr_08340 NC_012846.1 1001730 1002302 D hypothetical protein 1001730..1002302 Bartonella grahamii as4aup 7997806 YP_002971805.1 CDS Bgr_08350 NC_012846.1 1002400 1002942 D hypothetical protein 1002400..1002942 Bartonella grahamii as4aup 7997807 YP_002971806.1 CDS Bgr_08360 NC_012846.1 1003239 1003613 R hypothetical membrane spanning protein complement(1003239..1003613) Bartonella grahamii as4aup 7997808 YP_002971807.1 CDS yacB1 NC_012846.1 1003732 1004004 R YacB protein complement(1003732..1004004) Bartonella grahamii as4aup 7997809 YP_002971808.1 CDS yacA1 NC_012846.1 1004001 1004291 R YacA protein complement(1004001..1004291) Bartonella grahamii as4aup 7997810 YP_002971809.1 CDS Bgr_08400 NC_012846.1 1005016 1005216 R hypothetical DNA-binding protein complement(1005016..1005216) Bartonella grahamii as4aup 7997812 YP_002971810.1 CDS Bgr_08410 NC_012846.1 1005412 1006578 R phage integrase complement(1005412..1006578) Bartonella grahamii as4aup 7997813 YP_002971811.1 CDS Bgr_08420 NC_012846.1 1006803 1007228 D hypothetical protein 1006803..1007228 Bartonella grahamii as4aup 7997814 YP_002971812.1 CDS Bgr_08430 NC_012846.1 1007230 1008159 D hypothetical membrane protein 1007230..1008159 Bartonella grahamii as4aup 7997815 YP_002971813.1 CDS Bgr_08440 NC_012846.1 1008193 1009593 D hypothetical protein 1008193..1009593 Bartonella grahamii as4aup 7997816 YP_002971814.1 CDS Bgr_08450 NC_012846.1 1009595 1011781 D hypothetical protein 1009595..1011781 Bartonella grahamii as4aup 7997817 YP_002971815.1 CDS Bgr_08460 NC_012846.1 1011798 1012463 D lytic transglycosylase 1011798..1012463 Bartonella grahamii as4aup 7997818 YP_002971816.1 CDS Bgr_08470 NC_012846.1 1012476 1013477 D putative phage tail fiber protein 1012476..1013477 Bartonella grahamii as4aup 7997819 YP_002971817.1 CDS Bgr_08480 NC_012846.1 1013486 1014499 D putative phage tail fiber protein 1013486..1014499 Bartonella grahamii as4aup 7997820 YP_002971818.1 CDS Bgr_08490 NC_012846.1 1014507 1015634 D putative phage tail fiber protein 1014507..1015634 Bartonella grahamii as4aup 7997821 YP_002971819.1 CDS Bgr_08500 NC_012846.1 1015644 1015877 D hypothetical protein 1015644..1015877 Bartonella grahamii as4aup 7997822 YP_002971820.1 CDS Bgr_08510 NC_012846.1 1015899 1020011 D hypothetical protein 1015899..1020011 Bartonella grahamii as4aup 7997823 YP_002971821.1 CDS Bgr_08520 NC_012846.1 1020021 1020350 D hypothetical protein 1020021..1020350 Bartonella grahamii as4aup 7997824 YP_002971822.1 CDS Bgr_08530 NC_012846.1 1020414 1021076 D phage related lysozyme 1020414..1021076 Bartonella grahamii as4aup 7997825 YP_002971823.1 CDS Bgr_08540 NC_012846.1 1021103 1021300 D hypothetical protein 1021103..1021300 Bartonella grahamii as4aup 7997826 YP_002971824.1 CDS Bgr_08550 NC_012846.1 1021323 1021457 D hypothetical protein 1021323..1021457 Bartonella grahamii as4aup 7997827 YP_002971825.1 CDS Bgr_08560 NC_012846.1 1021429 1021647 D hypothetical membrane protein 1021429..1021647 Bartonella grahamii as4aup 7997828 YP_002971826.1 CDS Bgr_08570 NC_012846.1 1021672 1022487 D adenine-specific DNA methyltransferase 1021672..1022487 Bartonella grahamii as4aup 7997829 YP_002971827.1 CDS Bgr_08580 NC_012846.1 1022514 1022711 D hypothetical protein 1022514..1022711 Bartonella grahamii as4aup 7997830 YP_002971828.1 CDS Bgr_08590 NC_012846.1 1022734 1022868 D hypothetical protein 1022734..1022868 Bartonella grahamii as4aup 7997831 YP_002971829.1 CDS Bgr_08600 NC_012846.1 1022840 1023058 D hypothetical membrane protein 1022840..1023058 Bartonella grahamii as4aup 7997832 YP_002971830.1 CDS Bgr_08610 NC_012846.1 1023083 1023868 D adenine-specific DNA methyltransferase 1023083..1023868 Bartonella grahamii as4aup 7997833 YP_002971831.1 CDS Bgr_08620 NC_012846.1 1024186 1025337 D phage integrase 1024186..1025337 Bartonella grahamii as4aup 7997834 YP_002971832.1 CDS Bgr_08630 NC_012846.1 1025512 1025748 R hypothetical membrane protein complement(1025512..1025748) Bartonella grahamii as4aup 7997835 YP_002971833.1 CDS Bgr_08640 NC_012846.1 1025856 1026083 R hypothetical protein complement(1025856..1026083) Bartonella grahamii as4aup 7997836 YP_002971834.1 CDS Bgr_08650 NC_012846.1 1026080 1026742 R phage related lysozyme complement(1026080..1026742) Bartonella grahamii as4aup 7997837 YP_002971835.1 CDS Bgr_08660 NC_012846.1 1026925 1027248 D putative phage-related addiction module killer protein 1026925..1027248 Bartonella grahamii as4aup 7997838 YP_002971836.1 CDS Bgr_08670 NC_012846.1 1027261 1027572 D putative transcriptional regulator 1027261..1027572 Bartonella grahamii as4aup 7997839 YP_002971837.1 CDS Bgr_08680 NC_012846.1 1027618 1027896 R hypothetical protein complement(1027618..1027896) Bartonella grahamii as4aup 7997840 YP_002971838.1 CDS Bgr_08690 NC_012846.1 1027893 1028654 R anti-repressor protein complement(1027893..1028654) Bartonella grahamii as4aup 7997841 YP_002971839.1 CDS Bgr_08700 NC_012846.1 1028647 1028850 R transcriptional repressor Arc complement(1028647..1028850) Bartonella grahamii as4aup 7997842 YP_002971840.1 CDS Bgr_08710 NC_012846.1 1028926 1029150 D transcriptional repressor Arc 1028926..1029150 Bartonella grahamii as4aup 7998997 YP_002971841.1 CDS Bgr_08720 NC_012846.1 1029127 1029546 R anti-repressor protein complement(1029127..1029546) Bartonella grahamii as4aup 7998998 YP_002971842.1 CDS gpD2 NC_012846.1 1029850 1031166 R phage late control protein D2 complement(1029850..1031166) Bartonella grahamii as4aup 7997844 YP_002971843.1 CDS gpX2 NC_012846.1 1031163 1031387 R phage tail protein X2 complement(1031163..1031387) Bartonella grahamii as4aup 7997845 YP_002971844.1 CDS gpU2 NC_012846.1 1031384 1031764 R phage tail protein U2 complement(1031384..1031764) Bartonella grahamii as4aup 7997846 YP_002971845.1 CDS Bgr_08770 NC_012846.1 1031770 1034067 R phage tail protein complement(1031770..1034067) Bartonella grahamii as4aup 7997847 YP_002971846.1 CDS Bgr_08780 NC_012846.1 1034174 1034461 R putative phage related protein complement(1034174..1034461) Bartonella grahamii as4aup 7997848 YP_002971847.1 CDS gpFII NC_012846.1 1034464 1034970 R phage tail tube protein FII complement(1034464..1034970) Bartonella grahamii as4aup 7997849 YP_002971848.1 CDS gpFI NC_012846.1 1034970 1036181 R phage tail sheath protein FI complement(1034970..1036181) Bartonella grahamii as4aup 7997850 YP_002971849.1 CDS Bgr_08820 NC_012846.1 1036538 1037128 D anti-repressor protein 1036538..1037128 Bartonella grahamii as4aup 7997852 YP_002971850.1 CDS Bgr_08830 NC_012846.1 1037351 1037602 D putative prevent-host-death protein 1037351..1037602 Bartonella grahamii as4aup 7997853 YP_002971851.1 CDS Bgr_08840 NC_012846.1 1037678 1037986 R virulence-associated protein complement(1037678..1037986) Bartonella grahamii as4aup 7997854 YP_002971852.1 CDS Bgr_08850 NC_012846.1 1037997 1038275 R plasmid maintenance system killer protein complement(1037997..1038275) Bartonella grahamii as4aup 7997855 YP_002971853.1 CDS Bgr_08860 NC_012846.1 1038685 1038930 R phage related protein complement(1038685..1038930) Bartonella grahamii as4aup 7997856 YP_002971854.1 CDS Bgr_08870 NC_012846.1 1038940 1040295 R hypothetical protein complement(1038940..1040295) Bartonella grahamii as4aup 7997857 YP_002971855.1 CDS Bgr_08880 NC_012846.1 1040310 1043453 R phage related protein, virulence-associated complement(1040310..1043453) Bartonella grahamii as4aup 7997858 YP_002971856.1 CDS Bgr_08890 NC_012846.1 1043455 1044561 R phage protein complement(1043455..1044561) Bartonella grahamii as4aup 7997859 YP_002971857.1 CDS gpJ2 NC_012846.1 1044561 1045388 R phage baseplate assembly protein GpJ2 complement(1044561..1045388) Bartonella grahamii as4aup 7997860 YP_002971858.1 CDS gpW2 NC_012846.1 1045385 1045714 R phage baseplate assembly protein GpW2 complement(1045385..1045714) Bartonella grahamii as4aup 7997861 YP_002971859.1 CDS gpV2 NC_012846.1 1045723 1046412 R phage baseplate assembly protein V2 complement(1045723..1046412) Bartonella grahamii as4aup 7997862 YP_002971860.1 CDS Bgr_08930 NC_012846.1 1046393 1046941 R hypothetical protein complement(1046393..1046941) Bartonella grahamii as4aup 7997863 YP_002971861.1 CDS Bgr_08940 NC_012846.1 1047018 1047317 D hypothetical protein 1047018..1047317 Bartonella grahamii as4aup 7997864 YP_002971862.1 CDS Bgr_08950 NC_012846.1 1047304 1047576 D hypothetical protein 1047304..1047576 Bartonella grahamii as4aup 7997865 YP_002971863.1 CDS Bgr_08960 NC_012846.1 1047615 1047932 D HicB family protein 1047615..1047932 Bartonella grahamii as4aup 7997866 YP_002971864.1 CDS Bgr_08970 NC_012846.1 1048011 1048175 R hypothetical protein complement(1048011..1048175) Bartonella grahamii as4aup 7997867 YP_002971865.1 CDS Bgr_08980 NC_012846.1 1048286 1049017 R anti-repressor protein complement(1048286..1049017) Bartonella grahamii as4aup 7997868 YP_002971866.1 CDS Bgr_09000 NC_012846.1 1049437 1050333 R hypothetical protein complement(1049437..1050333) Bartonella grahamii as4aup 7997870 YP_002971867.1 CDS Bgr_09010 NC_012846.1 1050364 1050717 R hypothetical protein complement(1050364..1050717) Bartonella grahamii as4aup 7997871 YP_002971868.1 CDS gp20 NC_012846.1 1050719 1051795 R phage protein Gp20 complement(1050719..1051795) Bartonella grahamii as4aup 7997872 YP_002971869.1 CDS gp19 NC_012846.1 1051808 1052203 R phage protein Gp19 complement(1051808..1052203) Bartonella grahamii as4aup 7997873 YP_002971870.1 CDS gp18 NC_012846.1 1052436 1053491 R phage protein Gp18 complement(1052436..1053491) Bartonella grahamii as4aup 7997874 YP_002971871.1 CDS Bgr_09050 NC_012846.1 1053499 1055043 R phage portal protein complement(1053499..1055043) Bartonella grahamii as4aup 7997875 YP_002971872.1 CDS Bgr_09060 NC_012846.1 1055043 1055291 R putative phage related protein complement(1055043..1055291) Bartonella grahamii as4aup 7997876 YP_002971873.1 CDS gpA2 NC_012846.1 1055295 1057241 R phage terminase large subunit GpA2 complement(1055295..1057241) Bartonella grahamii as4aup 7997877 YP_002971874.1 CDS Bgr_09080 NC_012846.1 1057231 1057800 R phage protein complement(1057231..1057800) Bartonella grahamii as4aup 7997878 YP_002971875.1 CDS Bgr_09090 NC_012846.1 1058168 1058713 R hypothetical protein complement(1058168..1058713) Bartonella grahamii as4aup 7997879 YP_002971876.1 CDS Bgr_09100 NC_012846.1 1058756 1059070 R hypothetical protein complement(1058756..1059070) Bartonella grahamii as4aup 7997880 YP_002971877.1 CDS Bgr_09110 NC_012846.1 1059420 1059602 D YcfA family protein 1059420..1059602 Bartonella grahamii as4aup 7997881 YP_002971878.1 CDS Bgr_09120 NC_012846.1 1059623 1060045 D hypothetical protein 1059623..1060045 Bartonella grahamii as4aup 7997882 YP_002971879.1 CDS Bgr_09130 NC_012846.1 1060049 1060591 R hypothetical protein complement(1060049..1060591) Bartonella grahamii as4aup 7997883 YP_002971880.1 CDS ssb2 NC_012846.1 1060603 1061058 R single-strand binding protein complement(1060603..1061058) Bartonella grahamii as4aup 7997884 YP_002971881.1 CDS Bgr_09150 NC_012846.1 1061195 1061575 R putative transcriptional regulator complement(1061195..1061575) Bartonella grahamii as4aup 7997885 YP_002971882.1 CDS Bgr_09160 NC_012846.1 1061608 1062474 R DNA methyltransferase complement(1061608..1062474) Bartonella grahamii as4aup 7997886 YP_002971883.1 CDS Bgr_09170 NC_012846.1 1062587 1063102 R hypothetical membrane protein complement(1062587..1063102) Bartonella grahamii as4aup 7997887 YP_002971884.1 CDS Bgr_09180 NC_012846.1 1063089 1063391 R hypothetical protein complement(1063089..1063391) Bartonella grahamii as4aup 7997888 YP_002971885.1 CDS Bgr_09190 NC_012846.1 1063617 1064003 R hypothetical protein complement(1063617..1064003) Bartonella grahamii as4aup 7997889 YP_002971886.1 CDS Bgr_09200 NC_012846.1 1063987 1065114 R hypothetical protein complement(1063987..1065114) Bartonella grahamii as4aup 7997890 YP_002971887.1 CDS Bgr_09210 NC_012846.1 1065104 1065445 R hypothetical protein complement(1065104..1065445) Bartonella grahamii as4aup 7997891 YP_002971888.1 CDS Bgr_09220 NC_012846.1 1065429 1065911 R phage related protein complement(1065429..1065911) Bartonella grahamii as4aup 7997892 YP_002971889.1 CDS Bgr_09230 NC_012846.1 1065993 1066430 R hypothetical protein complement(1065993..1066430) Bartonella grahamii as4aup 7997893 YP_002971890.1 CDS Bgr_09240 NC_012846.1 1066447 1066788 R putative transcriptional regulator complement(1066447..1066788) Bartonella grahamii as4aup 7997894 YP_002971891.1 CDS Bgr_09250 NC_012846.1 1066875 1067174 D putative transcriptional regulator 1066875..1067174 Bartonella grahamii as4aup 7997895 YP_002971892.1 CDS Bgr_09260 NC_012846.1 1067385 1067759 D hypothetical protein 1067385..1067759 Bartonella grahamii as4aup 7997896 YP_002971893.1 CDS Bgr_09270 NC_012846.1 1067825 1068187 D putative anti-repressor protein 1067825..1068187 Bartonella grahamii as4aup 7997897 YP_002971894.1 CDS Bgr_09280 NC_012846.1 1068202 1068930 D anti-repressor protein 1068202..1068930 Bartonella grahamii as4aup 7997898 YP_002971895.1 CDS Bgr_09290 NC_012846.1 1069070 1069864 D putative phage recombination protein 1069070..1069864 Bartonella grahamii as4aup 7997899 YP_002971896.1 CDS exo3 NC_012846.1 1069866 1070489 D phage-related exonuclease 1069866..1070489 Bartonella grahamii as4aup 7997900 YP_002971897.1 CDS Bgr_09310 NC_012846.1 1070562 1070765 D putative phage transcriptional regulator 1070562..1070765 Bartonella grahamii as4aup 7997901 YP_002971898.1 CDS gpmA NC_012846.1 1071062 1071682 R catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase complement(1071062..1071682) Bartonella grahamii as4aup 7997903 YP_002971899.1 CDS dapB NC_012846.1 1071711 1072523 R catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase complement(1071711..1072523) Bartonella grahamii as4aup 7997904 YP_002971900.1 CDS Bgr_09360 NC_012846.1 1073768 1074460 R glutathione S-transferase complement(1073768..1074460) Bartonella grahamii as4aup 7997906 YP_002971901.1 CDS engB NC_012846.1 1074599 1075243 R binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC complement(1074599..1075243) Bartonella grahamii as4aup 7997907 YP_002971902.1 CDS yidC NC_012846.1 1075240 1077078 R functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; putative inner membrane protein translocase component YidC complement(1075240..1077078) Bartonella grahamii as4aup 7997908 YP_002971903.1 CDS rnpA NC_012846.1 1077068 1077460 R protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P complement(1077068..1077460) Bartonella grahamii as4aup 7997909 YP_002971904.1 CDS rpmH NC_012846.1 1077578 1077712 R in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 complement(1077578..1077712) Bartonella grahamii as4aup 7997910 YP_002971905.1 CDS mrp NC_012846.1 1078301 1079362 D Mrp protein 1078301..1079362 Bartonella grahamii as4aup 7997911 YP_002971906.1 CDS proC NC_012846.1 1079759 1080550 R catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase complement(1079759..1080550) Bartonella grahamii as4aup 7997912 YP_002971907.1 CDS Bgr_09430 NC_012846.1 1080606 1080851 R hypothetical membrane protein complement(1080606..1080851) Bartonella grahamii as4aup 7997913 YP_002971908.1 CDS Bgr_09440 NC_012846.1 1080955 1081335 R hypothetical protein complement(1080955..1081335) Bartonella grahamii as4aup 7997914 YP_002971909.1 CDS Bgr_09450 NC_012846.1 1081328 1082215 R tetrapyrrole methylase complement(1081328..1082215) Bartonella grahamii as4aup 7997915 YP_002971910.1 CDS Bgr_09470 NC_012846.1 1084269 1085933 R electron transfer flavoprotein-ubiquinone oxidoreductase complement(1084269..1085933) Bartonella grahamii as4aup 7997917 YP_002971911.1 CDS etfA NC_012846.1 1085937 1086857 R electron transfer flavoprotein alpha subunit complement(1085937..1086857) Bartonella grahamii as4aup 7997918 YP_002971912.1 CDS etfB NC_012846.1 1086909 1087655 R electron transfer flavoprotein beta subunit complement(1086909..1087655) Bartonella grahamii as4aup 7997919 YP_002971913.1 CDS Bgr_09500 NC_012846.1 1088279 1088986 D hypothetical membrane protein 1088279..1088986 Bartonella grahamii as4aup 7997920 YP_002971914.1 CDS Bgr_09510 NC_012846.1 1089166 1090086 D hypothetical membrane protein 1089166..1090086 Bartonella grahamii as4aup 7997921 YP_002971915.1 CDS Bgr_09520 NC_012846.1 1090089 1090898 D hypothetical membrane protein 1090089..1090898 Bartonella grahamii as4aup 7997922 YP_002971916.1 CDS Bgr_09530 NC_012846.1 1090921 1091202 R hypothetical protein complement(1090921..1091202) Bartonella grahamii as4aup 7997923 YP_002971917.1 CDS Bgr_09550 NC_012846.1 1092295 1093920 D peptide ABC transporter substrate-binding protein 1092295..1093920 Bartonella grahamii as4aup 7997925 YP_002971918.1 CDS Bgr_09570 NC_012846.1 1094852 1096477 D peptide ABC transporter substrate-binding protein 1094852..1096477 Bartonella grahamii as4aup 7997927 YP_002971919.1 CDS Bgr_09590 NC_012846.1 1097317 1098948 D peptide ABC transporter substrate-binding protein 1097317..1098948 Bartonella grahamii as4aup 7997929 YP_002971920.1 CDS xseA NC_012846.1 1099352 1100782 D bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 1099352..1100782 Bartonella grahamii as4aup 7997931 YP_002971921.1 CDS tag NC_012846.1 1100760 1101386 D DNA-3-methyladenine glycosylase I 1100760..1101386 Bartonella grahamii as4aup 7997932 YP_002971922.1 CDS Bgr_09640 NC_012846.1 1103029 1104654 D peptide ABC transporter substrate-binding protein 1103029..1104654 Bartonella grahamii as4aup 7997934 YP_002971923.1 CDS dppA NC_012846.1 1105029 1106630 D peptide ABC transporter substrate-binding protein 1105029..1106630 Bartonella grahamii as4aup 7997935 YP_002971924.1 CDS dppB NC_012846.1 1106743 1107816 D peptide ABC transporter permease 1106743..1107816 Bartonella grahamii as4aup 7997936 YP_002971925.1 CDS dppC NC_012846.1 1107819 1108748 D peptide ABC transporter permease 1107819..1108748 Bartonella grahamii as4aup 7997937 YP_002971926.1 CDS dppD NC_012846.1 1108741 1109625 D dipeptide ABC transporter, ATP-binding protein 1108741..1109625 Bartonella grahamii as4aup 7997938 YP_002971927.1 CDS dppF NC_012846.1 1109612 1110394 D dipeptide ABC transporter, ATP-binding protein 1109612..1110394 Bartonella grahamii as4aup 7997939 YP_002971928.1 CDS Bgr_09720 NC_012846.1 1116516 1120136 R autotransporter complement(1116516..1120136) Bartonella grahamii as4aup 7997942 YP_002971929.1 CDS Bgr_09730 NC_012846.1 1120932 1122062 D hypothetical protein 1120932..1122062 Bartonella grahamii as4aup 7997943 YP_002971930.1 CDS Bgr_09740 NC_012846.1 1122655 1123029 D hypothetical protein 1122655..1123029 Bartonella grahamii as4aup 7997944 YP_002971931.1 CDS gpU3 NC_012846.1 1123117 1123578 D phage tail protein U3 1123117..1123578 Bartonella grahamii as4aup 7997945 YP_002971932.1 CDS gpX3 NC_012846.1 1123575 1123829 D phage tail protein X3 1123575..1123829 Bartonella grahamii as4aup 7997946 YP_002971933.1 CDS gpD3 NC_012846.1 1123820 1124851 D phage late control protein D3 1123820..1124851 Bartonella grahamii as4aup 7997947 YP_002971934.1 CDS dnaB3 NC_012846.1 1124823 1126268 D unwinds double stranded DNA; replicative DNA helicase 1124823..1126268 Bartonella grahamii as4aup 7997948 YP_002971935.1 CDS Bgr_09790 NC_012846.1 1126666 1126947 D proteic killer suppression protein 1126666..1126947 Bartonella grahamii as4aup 7997949 YP_002971936.1 CDS vapA NC_012846.1 1126963 1127262 D virulence-associated protein A 1126963..1127262 Bartonella grahamii as4aup 7997950 YP_002971937.1 CDS Bgr_09810 NC_012846.1 1127300 1128337 R phage-related integrase/recombinase complement(1127300..1128337) Bartonella grahamii as4aup 7997951 YP_002971938.1 CDS Bgr_09820 NC_012846.1 1128340 1128588 R hypothetical protein complement(1128340..1128588) Bartonella grahamii as4aup 7997952 YP_002971939.1 CDS Bgr_09830 NC_012846.1 1128664 1129119 R phage related protein complement(1128664..1129119) Bartonella grahamii as4aup 7997953 YP_002971940.1 CDS Bgr_09840 NC_012846.1 1129116 1129661 R phage related protein complement(1129116..1129661) Bartonella grahamii as4aup 7997954 YP_002971941.1 CDS Bgr_09850 NC_012846.1 1129794 1130282 R hypothetical protein complement(1129794..1130282) Bartonella grahamii as4aup 7997955 YP_002971942.1 CDS exo4 NC_012846.1 1130350 1130973 R phage-related exonuclease complement(1130350..1130973) Bartonella grahamii as4aup 7997956 YP_002971943.1 CDS Bgr_09870 NC_012846.1 1130975 1131106 R putative phage recombination protein complement(1130975..1131106) Bartonella grahamii as4aup 7997957 YP_002971944.1 CDS Bgr_09880 NC_012846.1 1131067 1131768 R putative phage recombination protein complement(1131067..1131768) Bartonella grahamii as4aup 7997958 YP_002971945.1 CDS Bgr_09890 NC_012846.1 1131908 1132666 R anti-repressor protein complement(1131908..1132666) Bartonella grahamii as4aup 7997959 YP_002971946.1 CDS Bgr_09900 NC_012846.1 1132731 1133105 R hypothetical protein complement(1132731..1133105) Bartonella grahamii as4aup 7997960 YP_002971947.1 CDS Bgr_09910 NC_012846.1 1133264 1133881 R putative phage repressor complement(1133264..1133881) Bartonella grahamii as4aup 7997961 YP_002971948.1 CDS Bgr_09920 NC_012846.1 1133991 1134242 D putative transcriptional regulator 1133991..1134242 Bartonella grahamii as4aup 7997962 YP_002971949.1 CDS Bgr_09930 NC_012846.1 1134370 1135500 D phage related protein 1134370..1135500 Bartonella grahamii as4aup 7997963 YP_002971950.1 CDS Bgr_09940 NC_012846.1 1135484 1135870 D hypothetical protein 1135484..1135870 Bartonella grahamii as4aup 7997964 YP_002971951.1 CDS Bgr_09950 NC_012846.1 1136053 1136400 D hypothetical protein 1136053..1136400 Bartonella grahamii as4aup 7997965 YP_002971952.1 CDS Bgr_09970 NC_012846.1 1137032 1137337 R hypothetical protein complement(1137032..1137337) Bartonella grahamii as4aup 7997967 YP_002971953.1 CDS Bgr_09980 NC_012846.1 1137315 1137614 R hypothetical protein complement(1137315..1137614) Bartonella grahamii as4aup 7997968 YP_002971954.1 CDS ssb3 NC_012846.1 1137823 1138251 D single-strand binding protein 1137823..1138251 Bartonella grahamii as4aup 7997969 YP_002971955.1 CDS Bgr_10000 NC_012846.1 1138305 1138799 D hypothetical protein 1138305..1138799 Bartonella grahamii as4aup 7997970 YP_002971956.1 CDS Bgr_10010 NC_012846.1 1138896 1139123 D CopG-like DNA-binding protein 1138896..1139123 Bartonella grahamii as4aup 7997971 YP_002971957.1 CDS Bgr_10020 NC_012846.1 1139107 1139376 D addiction module toxin, RelE/StbE family 1139107..1139376 Bartonella grahamii as4aup 7997972 YP_002971958.1 CDS Bgr_10030 NC_012846.1 1139406 1139810 R hypothetical membrane protein complement(1139406..1139810) Bartonella grahamii as4aup 7997973 YP_002971959.1 CDS Bgr_10040 NC_012846.1 1139927 1140475 R hypothetical membrane protein complement(1139927..1140475) Bartonella grahamii as4aup 7997974 YP_002971960.1 CDS Bgr_10050 NC_012846.1 1140482 1140799 R hypothetical protein complement(1140482..1140799) Bartonella grahamii as4aup 7997975 YP_002971961.1 CDS Bgr_10070 NC_012846.1 1141158 1141472 D hypothetical protein 1141158..1141472 Bartonella grahamii as4aup 7997977 YP_002971962.1 CDS Bgr_10080 NC_012846.1 1141453 1142778 D phage terminase, large subunit 1141453..1142778 Bartonella grahamii as4aup 7997978 YP_002971963.1 CDS Bgr_10090 NC_012846.1 1142763 1144817 D putative phage portal protein 1142763..1144817 Bartonella grahamii as4aup 7997979 YP_002971964.1 CDS Bgr_10100 NC_012846.1 1144829 1145740 D hypothetical protein 1144829..1145740 Bartonella grahamii as4aup 7997980 YP_002971965.1 CDS Bgr_10110 NC_012846.1 1145838 1146983 D phage related protein 1145838..1146983 Bartonella grahamii as4aup 7997981 YP_002971966.1 CDS Bgr_10120 NC_012846.1 1147003 1147443 D hypothetical protein 1147003..1147443 Bartonella grahamii as4aup 7997982 YP_002971967.1 CDS Bgr_10130 NC_012846.1 1147516 1148214 D hypothetical protein 1147516..1148214 Bartonella grahamii as4aup 7997983 YP_002971968.1 CDS Bgr_10140 NC_012846.1 1148214 1149671 D hypothetical protein 1148214..1149671 Bartonella grahamii as4aup 7997984 YP_002971969.1 CDS Bgr_10150 NC_012846.1 1149668 1150096 D hypothetical protein 1149668..1150096 Bartonella grahamii as4aup 7997985 YP_002971970.1 CDS Bgr_10160 NC_012846.1 1150098 1151153 D hypothetical protein 1150098..1151153 Bartonella grahamii as4aup 7997986 YP_002971971.1 CDS Bgr_10170 NC_012846.1 1151153 1153021 D hypothetical protein 1151153..1153021 Bartonella grahamii as4aup 7997987 YP_002971972.1 CDS Bgr_10180 NC_012846.1 1153014 1155227 D hypothetical protein 1153014..1155227 Bartonella grahamii as4aup 7997988 YP_002971973.1 CDS Bgr_10190 NC_012846.1 1155227 1156219 D lytic transglycosylase 1155227..1156219 Bartonella grahamii as4aup 7997989 YP_002971974.1 CDS Bgr_10200 NC_012846.1 1156212 1157192 D putative phage tail fiber protein 1156212..1157192 Bartonella grahamii as4aup 7997990 YP_002971975.1 CDS Bgr_10210 NC_012846.1 1157202 1157450 D hypothetical DNA-binding protein 1157202..1157450 Bartonella grahamii as4aup 7997991 YP_002971976.1 CDS Bgr_10220 NC_012846.1 1157473 1159182 D hypothetical protein 1157473..1159182 Bartonella grahamii as4aup 7997992 YP_002971977.1 CDS Bgr_10230 NC_012846.1 1159196 1159861 D phage related lysozyme 1159196..1159861 Bartonella grahamii as4aup 7997993 YP_002971978.1 CDS Bgr_10240 NC_012846.1 1159858 1160085 D hypothetical protein 1159858..1160085 Bartonella grahamii as4aup 7997994 YP_002971979.1 CDS Bgr_10250 NC_012846.1 1160271 1160435 D hypothetical protein 1160271..1160435 Bartonella grahamii as4aup 7997995 YP_002971980.1 CDS Bgr_10260 NC_012846.1 1160496 1160777 R addiction module toxin, RelE/StbE family complement(1160496..1160777) Bartonella grahamii as4aup 7997996 YP_002971981.1 CDS dinJ2 NC_012846.1 1160785 1161066 R DNA-damage-inducible protein J complement(1160785..1161066) Bartonella grahamii as4aup 7997997 YP_002971982.1 CDS Bgr_10280 NC_012846.1 1161256 1161624 D putative transcriptional regulator 1161256..1161624 Bartonella grahamii as4aup 7997998 YP_002971983.1 CDS nuoA NC_012846.1 1163348 1163713 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit A 1163348..1163713 Bartonella grahamii as4aup 7998002 YP_002971984.1 CDS nuoB NC_012846.1 1163704 1164285 D The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 1163704..1164285 Bartonella grahamii as4aup 7998003 YP_002971985.1 CDS nuoC NC_012846.1 1164303 1164908 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit C 1164303..1164908 Bartonella grahamii as4aup 7998004 YP_002971986.1 CDS nuoD NC_012846.1 1165033 1166223 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit D 1165033..1166223 Bartonella grahamii as4aup 7998005 YP_002971987.1 CDS nuoE NC_012846.1 1166223 1166876 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit E 1166223..1166876 Bartonella grahamii as4aup 7998006 YP_002971988.1 CDS nuoF NC_012846.1 1167042 1168349 D part of NADH-ubiquinone oxidoreductase complex I; shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase; NADH dehydrogenase I subunit F 1167042..1168349 Bartonella grahamii as4aup 7998007 YP_002971989.1 CDS nuoG NC_012846.1 1168413 1170482 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit G 1168413..1170482 Bartonella grahamii as4aup 7998008 YP_002971990.1 CDS nuoH NC_012846.1 1170501 1171550 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H 1170501..1171550 Bartonella grahamii as4aup 7998009 YP_002971991.1 CDS nuoI NC_012846.1 1171565 1172056 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 1171565..1172056 Bartonella grahamii as4aup 7998010 YP_002971992.1 CDS nuoJ NC_012846.1 1172150 1172770 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit J 1172150..1172770 Bartonella grahamii as4aup 7998011 YP_002971993.1 CDS nuoK NC_012846.1 1172785 1173093 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit K 1172785..1173093 Bartonella grahamii as4aup 7998012 YP_002971994.1 CDS nuoL NC_012846.1 1173100 1175064 D Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L 1173100..1175064 Bartonella grahamii as4aup 7998013 YP_002971995.1 CDS nuoM NC_012846.1 1175064 1176533 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit M 1175064..1176533 Bartonella grahamii as4aup 7998014 YP_002971996.1 CDS nuoN NC_012846.1 1176551 1178005 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit N 1176551..1178005 Bartonella grahamii as4aup 7998015 YP_002971997.1 CDS birA NC_012846.1 1178005 1178814 D biotin-protein ligase BirA 1178005..1178814 Bartonella grahamii as4aup 7998016 YP_002971998.1 CDS Bgr_10470 NC_012846.1 1178861 1180537 D hypothetical protein 1178861..1180537 Bartonella grahamii as4aup 7998017 YP_002971999.1 CDS proS NC_012846.1 1180740 1182065 D catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 1180740..1182065 Bartonella grahamii as4aup 7998018 YP_002972000.1 CDS lolC NC_012846.1 1182077 1183345 D lipoprotein releasing system transmembrane protein LolC 1182077..1183345 Bartonella grahamii as4aup 7998019 YP_002972001.1 CDS lolD NC_012846.1 1183345 1184025 D lipoprotein releasing system ATP-binding protein LolD 1183345..1184025 Bartonella grahamii as4aup 7998020 YP_002972002.1 CDS Bgr_10510 NC_012846.1 1184092 1184379 D hypothetical protein 1184092..1184379 Bartonella grahamii as4aup 7998021 YP_002972003.1 CDS mfd NC_012846.1 1184385 1187885 D transcription repair coupling factor 1184385..1187885 Bartonella grahamii as4aup 7998022 YP_002972004.1 CDS Bgr_10540 NC_012846.1 1189557 1190168 D hypothetical membrane protein 1189557..1190168 Bartonella grahamii as4aup 7998024 YP_002972005.1 CDS rne NC_012846.1 1190255 1192885 R ribonuclease E complement(1190255..1192885) Bartonella grahamii as4aup 7998025 YP_002972006.1 CDS Bgr_10560 NC_012846.1 1193474 1194703 D N-acetylmuramoyl-l-alanine amidase 1193474..1194703 Bartonella grahamii as4aup 7998026 YP_002972007.1 CDS mrcA2 NC_012846.1 1194872 1197337 D penicillin-binding protein 1194872..1197337 Bartonella grahamii as4aup 7998027 YP_002972008.1 CDS prfB NC_012846.1 1197506 1198634 D catalyzes the release of newly synthesized polypeptide chains at the stop codons UAA and UGA; peptide chain release factor 2 join(1197506..1197574,1197576..1198634) Bartonella grahamii as4aup 7998028 YP_002972009.1 CDS bcp NC_012846.1 1198971 1199456 R bacterioferritin comigratory protein complement(1198971..1199456) Bartonella grahamii as4aup 7998029 YP_002972010.1 CDS tyrS NC_012846.1 1199643 1200896 R catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase complement(1199643..1200896) Bartonella grahamii as4aup 7998030 YP_002972011.1 CDS Bgr_10610 NC_012846.1 1201212 1201892 R hypothetical protein complement(1201212..1201892) Bartonella grahamii as4aup 7998031 YP_002972012.1 CDS nifS1 NC_012846.1 1202055 1203200 D nitrogenase cofactor synthesis protein NifS1 1202055..1203200 Bartonella grahamii as4aup 7998032 YP_002972013.1 CDS sufB NC_012846.1 1203370 1204881 D with SufCD activates cysteine desulfurase SufS; cysteine desulfurase activator complex subunit SufB 1203370..1204881 Bartonella grahamii as4aup 7998033 YP_002972014.1 CDS sufC NC_012846.1 1205041 1205796 D FeS assembly ATPase SufC 1205041..1205796 Bartonella grahamii as4aup 7998034 YP_002972015.1 CDS sufD NC_012846.1 1205808 1207070 D FeS assembly protein SufD 1205808..1207070 Bartonella grahamii as4aup 7998035 YP_002972016.1 CDS nifS2 NC_012846.1 1207081 1208325 D nitrogenase cofactor synthesis protein NifS2 1207081..1208325 Bartonella grahamii as4aup 7998036 YP_002972017.1 CDS Bgr_10670 NC_012846.1 1208318 1208719 D hypothetical protein 1208318..1208719 Bartonella grahamii as4aup 7998037 YP_002972018.1 CDS sthIM NC_012846.1 1208803 1210443 D adenine specific DNA methylase Mod 1208803..1210443 Bartonella grahamii as4aup 7998038 YP_002972019.1 CDS Bgr_10690 NC_012846.1 1210466 1213216 D type III restriction-modification enzyme helicase subunit 1210466..1213216 Bartonella grahamii as4aup 7998039 YP_002972020.1 CDS Bgr_10700 NC_012846.1 1213660 1214598 D hypothetical protein 1213660..1214598 Bartonella grahamii as4aup 7998040 YP_002972021.1 CDS sodC NC_012846.1 1215168 1215695 R superoxide dismutase (Cu-Zn) complement(1215168..1215695) Bartonella grahamii as4aup 7998041 YP_002972022.1 CDS Bgr_10720 NC_012846.1 1216028 1216384 R hypothetical membrane protein complement(1216028..1216384) Bartonella grahamii as4aup 7998042 YP_002972023.1 CDS Bgr_10730 NC_012846.1 1216362 1216706 R hypothetical protein complement(1216362..1216706) Bartonella grahamii as4aup 7998043 YP_002972024.1 CDS ubiH NC_012846.1 1217249 1218475 R 2-octaprenyl-6-methoxyphenyl hydroxylase complement(1217249..1218475) Bartonella grahamii as4aup 7998044 YP_002972025.1 CDS pcsA NC_012846.1 1218761 1219471 D phosphatidylcholine synthase 1218761..1219471 Bartonella grahamii as4aup 7998045 YP_002972026.1 CDS Bgr_10760 NC_012846.1 1219497 1220543 D catalyzes the formation of 3-hydroxy-2-methylpropanoate from 3-hydroxy-2-methylpropanoyl-CoA; 3-hydroxyisobutyryl-CoA hydrolase 1219497..1220543 Bartonella grahamii as4aup 7998046 YP_002972027.1 CDS Bgr_10770 NC_012846.1 1220540 1220953 D hypothetical membrane protein 1220540..1220953 Bartonella grahamii as4aup 7998047 YP_002972028.1 CDS Bgr_10780 NC_012846.1 1221275 1221634 R hypothetical membrane protein complement(1221275..1221634) Bartonella grahamii as4aup 7998048 YP_002972029.1 CDS Bgr_10790 NC_012846.1 1221742 1222551 R putative PhnP protein complement(1221742..1222551) Bartonella grahamii as4aup 7998049 YP_002972030.1 CDS Bgr_10800 NC_012846.1 1222562 1223335 R hydrolase, TatD family complement(1222562..1223335) Bartonella grahamii as4aup 7998050 YP_002972031.1 CDS metS NC_012846.1 1223325 1224884 R methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase complement(1223325..1224884) Bartonella grahamii as4aup 7998051 YP_002972032.1 CDS dnaC NC_012846.1 1224961 1226004 R catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' complement(1224961..1226004) Bartonella grahamii as4aup 7998052 YP_002972033.1 CDS tmk NC_012846.1 1226001 1226645 R catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase complement(1226001..1226645) Bartonella grahamii as4aup 7998053 YP_002972034.1 CDS dacA2 NC_012846.1 1226674 1227837 R penicillin-binding protein complement(1226674..1227837) Bartonella grahamii as4aup 7998054 YP_002972035.1 CDS rlpA NC_012846.1 1228926 1229825 R rare lipoprotein A complement(1228926..1229825) Bartonella grahamii as4aup 7998056 YP_002972036.1 CDS lexA NC_012846.1 1231653 1232366 D Represses a number of genes involved in the response to DNA damage; LexA repressor 1231653..1232366 Bartonella grahamii as4aup 7998059 YP_002972037.1 CDS rimO NC_012846.1 1232816 1234129 D catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit; ribosomal protein S12 methylthiotransferase 1232816..1234129 Bartonella grahamii as4aup 7998060 YP_002972038.1 CDS Bgr_10910 NC_012846.1 1234655 1235530 R putative PP-loop ATPase complement(1234655..1235530) Bartonella grahamii as4aup 7998061 YP_002972039.1 CDS rpsD NC_012846.1 1235798 1236415 R primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 complement(1235798..1236415) Bartonella grahamii as4aup 7998062 YP_002972040.1 CDS murI NC_012846.1 1236595 1237413 R converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase complement(1236595..1237413) Bartonella grahamii as4aup 7998063 YP_002972041.1 CDS Bgr_10940 NC_012846.1 1237413 1238243 R RNA methyltransferase, SpoU related complement(1237413..1238243) Bartonella grahamii as4aup 7998064 YP_002972042.1 CDS sfsA NC_012846.1 1238529 1239245 D Regulatory factor involved in maltose metabolism; sugar fermentation stimulation protein A 1238529..1239245 Bartonella grahamii as4aup 7998065 YP_002972043.1 CDS map NC_012846.1 1239238 1240068 D catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase 1239238..1240068 Bartonella grahamii as4aup 7998066 YP_002972044.1 CDS radC NC_012846.1 1240086 1240880 D DNA repair protein RadC 1240086..1240880 Bartonella grahamii as4aup 7998067 YP_002972045.1 CDS Bgr_10980 NC_012846.1 1240925 1241137 R hypothetical protein complement(1240925..1241137) Bartonella grahamii as4aup 7998068 YP_002972046.1 CDS Bgr_10990 NC_012846.1 1241753 1242526 R hydrolase, alpha/beta hydrolase fold family complement(1241753..1242526) Bartonella grahamii as4aup 7998069 YP_002972047.1 CDS Bgr_11000 NC_012846.1 1242523 1243035 R hypothetical protein complement(1242523..1243035) Bartonella grahamii as4aup 7998070 YP_002972048.1 CDS Bgr_11010 NC_012846.1 1243279 1243854 R cold shock protein complement(1243279..1243854) Bartonella grahamii as4aup 7998071 YP_002972049.1 CDS livJ NC_012846.1 1244179 1245312 D branched chain aa ABC transporter, periplasmic aa-binding protein 1244179..1245312 Bartonella grahamii as4aup 7998072 YP_002972050.1 CDS livH NC_012846.1 1245427 1246503 D branched chain amino acid ABC transporter, permease protein 1245427..1246503 Bartonella grahamii as4aup 7998073 YP_002972051.1 CDS livM NC_012846.1 1246503 1247561 D high-affinity branched-chain amino acid transporter, permease protein 1246503..1247561 Bartonella grahamii as4aup 7998074 YP_002972052.1 CDS livG NC_012846.1 1247558 1248340 D high-affinity branched-chain amino acid transport, ATP-binding protein 1247558..1248340 Bartonella grahamii as4aup 7998075 YP_002972053.1 CDS livF NC_012846.1 1248327 1249037 D high-affinity branched-chain amino acid transport, ATP-binding protein 1248327..1249037 Bartonella grahamii as4aup 7998076 YP_002972054.1 CDS gatA NC_012846.1 1249133 1250617 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A complement(1249133..1250617) Bartonella grahamii as4aup 7998077 YP_002972055.1 CDS gatC NC_012846.1 1250649 1250936 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C complement(1250649..1250936) Bartonella grahamii as4aup 7998078 YP_002972056.1 CDS Bgr_11090 NC_012846.1 1251075 1251554 D putative Holliday junction resolvase 1251075..1251554 Bartonella grahamii as4aup 7998079 YP_002972057.1 CDS Bgr_11100 NC_012846.1 1251539 1253158 R acyl-CoA dehydrogenase complement(1251539..1253158) Bartonella grahamii as4aup 7998080 YP_002972058.1 CDS pyrB NC_012846.1 1253284 1254249 D catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 1253284..1254249 Bartonella grahamii as4aup 7998081 YP_002972059.1 CDS pyrC2 NC_012846.1 1254246 1255547 D Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase 1254246..1255547 Bartonella grahamii as4aup 7998082 YP_002972060.1 CDS Bgr_11130 NC_012846.1 1255559 1256191 D hypothetical membrane protein 1255559..1256191 Bartonella grahamii as4aup 7998083 YP_002972061.1 CDS dprA NC_012846.1 1256166 1257380 D DNA processing chain A 1256166..1257380 Bartonella grahamii as4aup 7998084 YP_002972062.1 CDS topA NC_012846.1 1257782 1260355 D catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 1257782..1260355 Bartonella grahamii as4aup 7998085 YP_002972063.1 CDS vacB NC_012846.1 1260359 1262635 D exoribonuclease 1260359..1262635 Bartonella grahamii as4aup 7998086 YP_002972064.1 CDS Bgr_11170 NC_012846.1 1262958 1264094 D major facilitator family transporter 1262958..1264094 Bartonella grahamii as4aup 7998087 YP_002972065.1 CDS rpmG NC_012846.1 1264208 1264375 D in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 1264208..1264375 Bartonella grahamii as4aup 7998088 YP_002972066.1 CDS Bgr_11190 NC_012846.1 1264712 1265269 D SNase-like; putative nuclease 1264712..1265269 Bartonella grahamii as4aup 7998089 YP_002972067.1 CDS Bgr_11200 NC_012846.1 1265298 1265927 D putative uracil-DNA glycosylase protein 1265298..1265927 Bartonella grahamii as4aup 7998090 YP_002972068.1 CDS Bgr_11210 NC_012846.1 1265949 1266440 D transcriptional regulator , AsnC/Lrp family 1265949..1266440 Bartonella grahamii as4aup 7998091 YP_002972069.1 CDS cobT NC_012846.1 1266489 1267475 R catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase complement(1266489..1267475) Bartonella grahamii as4aup 7998092 YP_002972070.1 CDS Bgr_11230 NC_012846.1 1267868 1268848 R tRNA-dihydrouridine synthase A complement(1267868..1268848) Bartonella grahamii as4aup 7998093 YP_002972071.1 CDS glpD NC_012846.1 1269551 1271065 R in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; glycerol-3-phosphate dehydrogenase complement(1269551..1271065) Bartonella grahamii as4aup 7998094 YP_002972072.1 CDS Bgr_11250 NC_012846.1 1271427 1272299 D outer membrane protein 1271427..1272299 Bartonella grahamii as4aup 7998095 YP_002972073.1 CDS accB NC_012846.1 1272541 1273038 D composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit 1272541..1273038 Bartonella grahamii as4aup 7998096 YP_002972074.1 CDS accC NC_012846.1 1273053 1274411 D an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit 1273053..1274411 Bartonella grahamii as4aup 7998097 YP_002972075.1 CDS Bgr_11300 NC_012846.1 1275180 1275686 R hypothetical protein complement(1275180..1275686) Bartonella grahamii as4aup 7998100 YP_002972076.1 CDS Bgr_11310 NC_012846.1 1275822 1276994 R hypothetical protein complement(1275822..1276994) Bartonella grahamii as4aup 7998101 YP_002972077.1 CDS folE NC_012846.1 1277410 1278030 R involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I complement(1277410..1278030) Bartonella grahamii as4aup 7998103 YP_002972078.1 CDS Bgr_11340 NC_012846.1 1278156 1278584 D nitrogen-fixing NifU-like protein 1278156..1278584 Bartonella grahamii as4aup 7998104 YP_002972079.1 CDS Bgr_11350 NC_012846.1 1278585 1278935 D hypothetical protein 1278585..1278935 Bartonella grahamii as4aup 7998105 YP_002972080.1 CDS thrS NC_012846.1 1279047 1281023 D catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 1279047..1281023 Bartonella grahamii as4aup 7998106 YP_002972081.1 CDS Bgr_11380 NC_012846.1 1282147 1282650 R putative transcriptional regulator, MerR family complement(1282147..1282650) Bartonella grahamii as4aup 7998108 YP_002972082.1 CDS ihfA NC_012846.1 1282845 1283159 R This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit alpha complement(1282845..1283159) Bartonella grahamii as4aup 7998109 YP_002972083.1 CDS fabH NC_012846.1 1283237 1284211 R FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-(acyl carrier protein) synthase III complement(1283237..1284211) Bartonella grahamii as4aup 7998110 YP_002972084.1 CDS plsX NC_012846.1 1284261 1285331 R involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; putative glycerol-3-phosphate acyltransferase PlsX complement(1284261..1285331) Bartonella grahamii as4aup 7998111 YP_002972085.1 CDS Bgr_11420 NC_012846.1 1285481 1286038 R hypothetical protein complement(1285481..1286038) Bartonella grahamii as4aup 7998112 YP_002972086.1 CDS Bgr_11430 NC_012846.1 1286259 1286738 D small protein A, outer membrane lipoprotein 1286259..1286738 Bartonella grahamii as4aup 7998113 YP_002972087.1 CDS nusB NC_012846.1 1286816 1287286 R Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB complement(1286816..1287286) Bartonella grahamii as4aup 7998114 YP_002972088.1 CDS ribH NC_012846.1 1287289 1287744 R RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase complement(1287289..1287744) Bartonella grahamii as4aup 7998115 YP_002972089.1 CDS ribE NC_012846.1 1287826 1288443 R catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha complement(1287826..1288443) Bartonella grahamii as4aup 7998116 YP_002972090.1 CDS ribD NC_012846.1 1288425 1289552 R riboflavin biosynthesis protein ribD complement(1288425..1289552) Bartonella grahamii as4aup 7998117 YP_002972091.1 CDS nrdR NC_012846.1 1289545 1290027 R NrdR-like; transcriptional regulator NrdR complement(1289545..1290027) Bartonella grahamii as4aup 7998118 YP_002972092.1 CDS glyA NC_012846.1 1290039 1291352 R catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase complement(1290039..1291352) Bartonella grahamii as4aup 7998119 YP_002972093.1 CDS argC NC_012846.1 1291674 1292606 D catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis; N-acetyl-gamma-glutamyl-phosphate reductase 1291674..1292606 Bartonella grahamii as4aup 7998120 YP_002972094.1 CDS Bgr_11510 NC_012846.1 1292627 1293703 R cytochrome c oxidase assembly protein complement(1292627..1293703) Bartonella grahamii as4aup 7998121 YP_002972095.1 CDS Bgr_11520 NC_012846.1 1293850 1295676 R hypothetical membrane protein complement(1293850..1295676) Bartonella grahamii as4aup 7998122 YP_002972096.1 CDS hflX NC_012846.1 1295822 1297165 R GTP-binding protein HflX complement(1295822..1297165) Bartonella grahamii as4aup 7998123 YP_002972097.1 CDS hfq NC_012846.1 1297220 1297459 R Stimulates the elongation of poly(A) tails; RNA-binding protein Hfq complement(1297220..1297459) Bartonella grahamii as4aup 7998124 YP_002972098.1 CDS Bgr_11550 NC_012846.1 1298116 1302675 D hypothetical protein 1298116..1302675 Bartonella grahamii as4aup 7998125 YP_002972099.1 CDS maeB2 NC_012846.1 1303809 1306127 D NAD-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; does not decarboxylate oxaloacetate; malic enzyme 1303809..1306127 Bartonella grahamii as4aup 7998126 YP_002972100.1 CDS acpP2 NC_012846.1 1306317 1306601 D Involved in the biosynthetic pathways of fatty acids, phospholipids, lipopolysaccharides, and oligosaccharides; acyl carrier protein 1306317..1306601 Bartonella grahamii as4aup 7998127 YP_002972101.1 CDS fabF2 NC_012846.1 1306612 1307787 D FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II 1306612..1307787 Bartonella grahamii as4aup 7998128 YP_002972102.1 CDS fabF3 NC_012846.1 1307803 1309077 D FabF, beta-Ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP.; 3-oxoacyl-(acyl carrier protein) synthase II 1307803..1309077 Bartonella grahamii as4aup 7998129 YP_002972103.1 CDS adh NC_012846.1 1309136 1310164 D alcohol dehydrogenase 1309136..1310164 Bartonella grahamii as4aup 7998130 YP_002972104.1 CDS Bgr_11610 NC_012846.1 1310168 1311100 D Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis lauroyl acyltransferase 1310168..1311100 Bartonella grahamii as4aup 7998131 YP_002972105.1 CDS mazG NC_012846.1 1311134 1311949 D nucleotide pyrophosphohydrolase MazG 1311134..1311949 Bartonella grahamii as4aup 7998132 YP_002972106.1 CDS Bgr_11630 NC_012846.1 1312019 1312384 R putative FeS assembly scaffold SufA complement(1312019..1312384) Bartonella grahamii as4aup 7998133 YP_002972107.1 CDS ibpA2 NC_012846.1 1313294 1313761 R heat shock protein complement(1313294..1313761) Bartonella grahamii as4aup 7998135 YP_002972108.1 CDS Bgr_11660 NC_012846.1 1314041 1314958 D lysophospholipase L2 1314041..1314958 Bartonella grahamii as4aup 7998136 YP_002972109.1 CDS Bgr_11670 NC_012846.1 1315808 1316170 D response regulator 1315808..1316170 Bartonella grahamii as4aup 7998137 YP_002972110.1 CDS Bgr_11700 NC_012846.1 1316891 1317673 R adenine-specific DNA methyltransferase complement(1316891..1317673) Bartonella grahamii as4aup 7998140 YP_002972111.1 CDS Bgr_11710 NC_012846.1 1317698 1317916 R hypothetical membrane protein complement(1317698..1317916) Bartonella grahamii as4aup 7998141 YP_002972112.1 CDS Bgr_11720 NC_012846.1 1317888 1318022 R hypothetical protein complement(1317888..1318022) Bartonella grahamii as4aup 7998142 YP_002972113.1 CDS Bgr_11730 NC_012846.1 1318045 1318314 R hypothetical protein complement(1318045..1318314) Bartonella grahamii as4aup 7998143 YP_002972114.1 CDS Bgr_11760 NC_012846.1 1319998 1320171 D hypothetical protein 1319998..1320171 Bartonella grahamii as4aup 7998146 YP_002972115.1 CDS Bgr_11790 NC_012846.1 1321655 1322740 R hypothetical membrane protein complement(1321655..1322740) Bartonella grahamii as4aup 7998149 YP_002972116.1 CDS Bgr_11820 NC_012846.1 1323819 1324046 D hypothetical protein 1323819..1324046 Bartonella grahamii as4aup 7998152 YP_002972117.1 CDS Bgr_11830 NC_012846.1 1324178 1324390 D hypothetical membrane protein 1324178..1324390 Bartonella grahamii as4aup 7998153 YP_002972118.1 CDS Bgr_11850 NC_012846.1 1324761 1325066 R NADH-ubiquinone oxidoreductase complement(1324761..1325066) Bartonella grahamii as4aup 7998155 YP_002972119.1 CDS Bgr_11870 NC_012846.1 1325902 1326591 R hypothetical protein complement(1325902..1326591) Bartonella grahamii as4aup 7998157 YP_002972120.1 CDS perM NC_012846.1 1326588 1327799 R permease protein complement(1326588..1327799) Bartonella grahamii as4aup 7998158 YP_002972121.1 CDS purM NC_012846.1 1327957 1329048 D catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 1327957..1329048 Bartonella grahamii as4aup 7998159 YP_002972122.1 CDS purN NC_012846.1 1329045 1329656 D phosphoribosylglycinamide formyltransferase 1329045..1329656 Bartonella grahamii as4aup 7998160 YP_002972123.1 CDS Bgr_11910 NC_012846.1 1329942 1332476 R sensor histidine kinase complement(1329942..1332476) Bartonella grahamii as4aup 7998161 YP_002972124.1 CDS Bgr_11920 NC_012846.1 1332689 1333165 D hypothetical protein 1332689..1333165 Bartonella grahamii as4aup 7998162 YP_002972125.1 CDS dksA NC_012846.1 1333218 1333634 R DnaK suppressor protein DksA complement(1333218..1333634) Bartonella grahamii as4aup 7998163 YP_002972126.1 CDS nmoB NC_012846.1 1333948 1334457 R 4-hydroxyphenylacetate 3-monooxygenase complement(1333948..1334457) Bartonella grahamii as4aup 7998164 YP_002972127.1 CDS rpe NC_012846.1 1334628 1335314 D pentose (ribulose)-5-phosphate-3-epimerase Rpe 1334628..1335314 Bartonella grahamii as4aup 7998165 YP_002972128.1 CDS purB NC_012846.1 1335314 1336621 D Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 1335314..1336621 Bartonella grahamii as4aup 7998166 YP_002972129.1 CDS Bgr_11970 NC_012846.1 1336691 1337239 D hypothetical protein 1336691..1337239 Bartonella grahamii as4aup 7998167 YP_002972130.1 CDS purC NC_012846.1 1337413 1338177 D catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 1337413..1338177 Bartonella grahamii as4aup 7998168 YP_002972131.1 CDS purS NC_012846.1 1338257 1338496 D phosphoribosylformylglycinamidine synthase, PurS component 1338257..1338496 Bartonella grahamii as4aup 7998169 YP_002972132.1 CDS purQ NC_012846.1 1338508 1339179 D catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase I 1338508..1339179 Bartonella grahamii as4aup 7998170 YP_002972133.1 CDS purL NC_012846.1 1339470 1341680 D catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase II 1339470..1341680 Bartonella grahamii as4aup 7998171 YP_002972134.1 CDS Bgr_12020 NC_012846.1 1341740 1341973 D BolA family protein 1341740..1341973 Bartonella grahamii as4aup 7998172 YP_002972135.1 CDS Bgr_12030 NC_012846.1 1342072 1342404 D glutaredoxin-like protein 1342072..1342404 Bartonella grahamii as4aup 7998173 YP_002972136.1 CDS Bgr_12040 NC_012846.1 1342476 1343732 D bicyclomycin resistance protein 1342476..1343732 Bartonella grahamii as4aup 7998174 YP_002972137.1 CDS parC NC_012846.1 1344070 1346319 R decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A complement(1344070..1346319) Bartonella grahamii as4aup 7998175 YP_002972138.1 CDS aspS NC_012846.1 1347097 1348890 R catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase complement(1347097..1348890) Bartonella grahamii as4aup 7998176 YP_002972139.1 CDS rnd NC_012846.1 1349023 1350177 D ribonuclease D 1349023..1350177 Bartonella grahamii as4aup 7998177 YP_002972140.1 CDS Bgr_12090 NC_012846.1 1352229 1353746 R phosphatase, Ppx/GppA family complement(1352229..1353746) Bartonella grahamii as4aup 7998179 YP_002972141.1 CDS ppk NC_012846.1 1353753 1355933 R catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase complement(1353753..1355933) Bartonella grahamii as4aup 7998180 YP_002972142.1 CDS Bgr_12110 NC_012846.1 1356260 1356508 D hypothetical protein 1356260..1356508 Bartonella grahamii as4aup 7998181 YP_002972143.1 CDS Bgr_12120 NC_012846.1 1356561 1357808 D catalyzes the formation of catechol from salicylate; salicylate hydroxylase 1356561..1357808 Bartonella grahamii as4aup 7998182 YP_002972144.1 CDS dnaE NC_012846.1 1358088 1361582 R catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha complement(1358088..1361582) Bartonella grahamii as4aup 7998183 YP_002972145.1 CDS recG NC_012846.1 1361957 1364065 D catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 1361957..1364065 Bartonella grahamii as4aup 7998184 YP_002972146.1 CDS glmS NC_012846.1 1364459 1366282 R Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase complement(1364459..1366282) Bartonella grahamii as4aup 7998185 YP_002972147.1 CDS glmU NC_012846.1 1366455 1367804 R forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase complement(1366455..1367804) Bartonella grahamii as4aup 7998186 YP_002972148.1 CDS ccdA NC_012846.1 1367819 1368604 R cytochrome c-type biogenesis protein, transmembrane region complement(1367819..1368604) Bartonella grahamii as4aup 7998187 YP_002972149.1 CDS Bgr_12180 NC_012846.1 1368651 1369640 R hypothetical protein complement(1368651..1369640) Bartonella grahamii as4aup 7998188 YP_002972150.1 CDS Bgr_12190 NC_012846.1 1369680 1370003 R iron-sulfur cluster assembly accessory protein complement(1369680..1370003) Bartonella grahamii as4aup 7998189 YP_002972151.1 CDS dgt NC_012846.1 1370112 1371314 D dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein 1370112..1371314 Bartonella grahamii as4aup 7998190 YP_002972152.1 CDS argS NC_012846.1 1371345 1373102 D catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 1371345..1373102 Bartonella grahamii as4aup 7998191 YP_002972153.1 CDS Bgr_12220 NC_012846.1 1373254 1375791 D hypothetical membrane protein 1373254..1375791 Bartonella grahamii as4aup 7998192 YP_002972154.1 CDS Bgr_12230 NC_012846.1 1375971 1376243 R hypothetical membrane protein complement(1375971..1376243) Bartonella grahamii as4aup 7998193 YP_002972155.1 CDS ilvE NC_012846.1 1376549 1377655 D catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 1376549..1377655 Bartonella grahamii as4aup 7998194 YP_002972156.1 CDS glpX NC_012846.1 1377760 1378746 R type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II complement(1377760..1378746) Bartonella grahamii as4aup 7998195 YP_002972157.1 CDS hom NC_012846.1 1378890 1380206 R catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase complement(1378890..1380206) Bartonella grahamii as4aup 7998196 YP_002972158.1 CDS icdA NC_012846.1 1382322 1383536 D Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase 1382322..1383536 Bartonella grahamii as4aup 7998198 YP_002972159.1 CDS Bgr_12290 NC_012846.1 1383658 1385085 D major facilitator family transporter 1383658..1385085 Bartonella grahamii as4aup 7998199 YP_002972160.1 CDS Bgr_12300 NC_012846.1 1385129 1386328 R putative permease of the major facilitator superfamily complement(1385129..1386328) Bartonella grahamii as4aup 7998200 YP_002972161.1 CDS tgt NC_012846.1 1387543 1388661 R Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase complement(1387543..1388661) Bartonella grahamii as4aup 7998201 YP_002972162.1 CDS ppiB1 NC_012846.1 1390110 1390622 R peptidyl prolyl cis-trans isomerase B, cyclophilin type complement(1390110..1390622) Bartonella grahamii as4aup 7998203 YP_002972163.1 CDS ppiB2 NC_012846.1 1390641 1391234 R peptidyl-prolyl cis-trans isomerase B, cyclophilin type complement(1390641..1391234) Bartonella grahamii as4aup 7998204 YP_002972164.1 CDS coaD NC_012846.1 1391237 1391743 R Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase complement(1391237..1391743) Bartonella grahamii as4aup 7998205 YP_002972165.1 CDS gyrA NC_012846.1 1391768 1394551 R negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A complement(1391768..1394551) Bartonella grahamii as4aup 7998206 YP_002972166.1 CDS ssb4 NC_012846.1 1394780 1395286 R single-strand binding protein complement(1394780..1395286) Bartonella grahamii as4aup 7998207 YP_002972167.1 CDS uvrA NC_012846.1 1395620 1398535 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A 1395620..1398535 Bartonella grahamii as4aup 7998208 YP_002972168.1 CDS glnB NC_012846.1 1399598 1399936 D nitrogen regulatory protein P-II 1399598..1399936 Bartonella grahamii as4aup 7998210 YP_002972169.1 CDS glnA2 NC_012846.1 1399996 1401405 D glutamine synthetase I 1399996..1401405 Bartonella grahamii as4aup 7998211 YP_002972170.1 CDS Bgr_12430 NC_012846.1 1401561 1402106 D hypothetical protein 1401561..1402106 Bartonella grahamii as4aup 7998212 YP_002972171.1 CDS Bgr_12440 NC_012846.1 1402142 1402930 R hypothetical protein complement(1402142..1402930) Bartonella grahamii as4aup 7998213 YP_002972172.1 CDS Bgr_12470 NC_012846.1 1405353 1406300 D hypothetical integral membrane protein 1405353..1406300 Bartonella grahamii as4aup 7998216 YP_002972173.1 CDS Bgr_12500 NC_012846.1 1408519 1411272 R autotransporter complement(1408519..1411272) Bartonella grahamii as4aup 7998219 YP_002972174.1 CDS Bgr_12520 NC_012846.1 1412677 1413078 R hypothetical protein complement(1412677..1413078) Bartonella grahamii as4aup 7998221 YP_002972175.1 CDS Bgr_12560 NC_012846.1 1416075 1417451 R amino acid permease complement(1416075..1417451) Bartonella grahamii as4aup 7998224 YP_002972176.1 CDS Bgr_12570 NC_012846.1 1418325 1418669 D hypothetical membrane protein 1418325..1418669 Bartonella grahamii as4aup 7998225 YP_002972177.1 CDS hutH NC_012846.1 1418901 1420439 R catalyzes the degradation of histidine to urocanate and ammmonia; histidine ammonia-lyase complement(1418901..1420439) Bartonella grahamii as4aup 7998226 YP_002972178.1 CDS Bgr_12590 NC_012846.1 1421350 1422162 R SAM-dependent methyltransfrase complement(1421350..1422162) Bartonella grahamii as4aup 7998227 YP_002972179.1 CDS lemA NC_012846.1 1422540 1423166 D cytoplasmic membrane protein 1422540..1423166 Bartonella grahamii as4aup 7998228 YP_002972180.1 CDS Bgr_12610 NC_012846.1 1423166 1424017 D hypothetical membrane protein 1423166..1424017 Bartonella grahamii as4aup 7998229 YP_002972181.1 CDS lipB NC_012846.1 1424140 1424877 D lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein; lipoate-protein ligase B 1424140..1424877 Bartonella grahamii as4aup 7998230 YP_002972182.1 CDS parE NC_012846.1 1424959 1427025 D decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 1424959..1427025 Bartonella grahamii as4aup 7998231 YP_002972183.1 CDS recJ NC_012846.1 1427043 1428827 R single-stranded-DNA-specific exonuclease complement(1427043..1428827) Bartonella grahamii as4aup 7998232 YP_002972184.1 CDS rplM NC_012846.1 1429124 1429588 D in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 1429124..1429588 Bartonella grahamii as4aup 7998233 YP_002972185.1 CDS rpsI NC_012846.1 1429591 1430076 D forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 1429591..1430076 Bartonella grahamii as4aup 7998234 YP_002972186.1 CDS divK NC_012846.1 1430381 1430746 R two component response regulator complement(1430381..1430746) Bartonella grahamii as4aup 7998235 YP_002972187.1 CDS Bgr_12680 NC_012846.1 1431270 1431632 R hypothetical protein complement(1431270..1431632) Bartonella grahamii as4aup 7998236 YP_002972188.1 CDS Bgr_12700 NC_012846.1 1432364 1433152 R ABC transporter permease complement(1432364..1433152) Bartonella grahamii as4aup 7998238 YP_002972189.1 CDS Bgr_12710 NC_012846.1 1433136 1433870 R ABC transporter permease complement(1433136..1433870) Bartonella grahamii as4aup 7998239 YP_002972190.1 CDS Bgr_12720 NC_012846.1 1433935 1434954 R ABC-type transport system, ATP-binding protein complement(1433935..1434954) Bartonella grahamii as4aup 7998240 YP_002972191.1 CDS rluC NC_012846.1 1435744 1436727 R ribosomal large subunit pseudouridine synthase C complement(1435744..1436727) Bartonella grahamii as4aup 7998241 YP_002972192.1 CDS tpxA NC_012846.1 1436965 1438746 D responsible for transport of beta-1,2-glucans from the cytoplasm to periplasm; inner membrane ABC transporter permease component; Cgt; ChvA; NdvA; cyclic beta-1,2-glucan ABC transporter 1436965..1438746 Bartonella grahamii as4aup 7998242 YP_002972193.1 CDS Bgr_12760 NC_012846.1 1439940 1440071 R hypothetical protein complement(1439940..1440071) Bartonella grahamii as4aup 7998244 YP_002972194.1 CDS Bgr_12770 NC_012846.1 1440739 1441518 R phage related protein complement(1440739..1441518) Bartonella grahamii as4aup 7998245 YP_002972195.1 CDS Bgr_12780 NC_012846.1 1441609 1442067 R phage related protein complement(1441609..1442067) Bartonella grahamii as4aup 7998246 YP_002972196.1 CDS Bgr_12790 NC_012846.1 1442145 1442978 R phage related protein complement(1442145..1442978) Bartonella grahamii as4aup 7998247 YP_002972197.1 CDS dinJ3 NC_012846.1 1444313 1444585 R DNA-damage-inducible protein J complement(1444313..1444585) Bartonella grahamii as4aup 7998250 YP_002972198.1 CDS Bgr_12840 NC_012846.1 1450042 1451058 R hypothetical protein complement(1450042..1451058) Bartonella grahamii as4aup 7998252 YP_002972199.1 CDS Bgr_12850 NC_012846.1 1451150 1451476 R virulence-associated protein E complement(1451150..1451476) Bartonella grahamii as4aup 7998253 YP_002972200.1 CDS Bgr_12860 NC_012846.1 1451574 1451774 R hypothetical DNA-binding protein complement(1451574..1451774) Bartonella grahamii as4aup 7998254 YP_002972201.1 CDS Bgr_12880 NC_012846.1 1453936 1454994 D radical SAM domain; hypothetical protein 1453936..1454994 Bartonella grahamii as4aup 7998256 YP_002972202.1 CDS Bgr_12890 NC_012846.1 1455041 1456771 D hypothetical protein 1455041..1456771 Bartonella grahamii as4aup 7998257 YP_002972203.1 CDS Bgr_12900 NC_012846.1 1456761 1457375 D radical SAM domain; hypothetical protein 1456761..1457375 Bartonella grahamii as4aup 7998258 YP_002972204.1 CDS Bgr_12910 NC_012846.1 1457344 1458336 D hypothetical protein 1457344..1458336 Bartonella grahamii as4aup 7998259 YP_002972205.1 CDS Bgr_12940 NC_012846.1 1460686 1460886 R hypothetical DNA-binding protein complement(1460686..1460886) Bartonella grahamii as4aup 7998262 YP_002972206.1 CDS alaS NC_012846.1 1462526 1465198 R Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase complement(1462526..1465198) Bartonella grahamii as4aup 7998264 YP_002972207.1 CDS recA NC_012846.1 1465408 1466451 R catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A complement(1465408..1466451) Bartonella grahamii as4aup 7998265 YP_002972208.1 CDS Bgr_12990 NC_012846.1 1467446 1468765 R recombination factor protein RarA complement(1467446..1468765) Bartonella grahamii as4aup 7998267 YP_002972209.1 CDS htrA2 NC_012846.1 1468775 1470169 R serine protease complement(1468775..1470169) Bartonella grahamii as4aup 7998268 YP_002972210.1 CDS rplQ NC_012846.1 1470438 1470866 R is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 complement(1470438..1470866) Bartonella grahamii as4aup 7998269 YP_002972211.1 CDS rpoA NC_012846.1 1470891 1471904 R catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha complement(1470891..1471904) Bartonella grahamii as4aup 7998270 YP_002972212.1 CDS rpsK NC_012846.1 1471999 1472388 R located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 complement(1471999..1472388) Bartonella grahamii as4aup 7998271 YP_002972213.1 CDS rpsM NC_012846.1 1472503 1472871 R located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 complement(1472503..1472871) Bartonella grahamii as4aup 7998272 YP_002972214.1 CDS adk NC_012846.1 1473049 1473627 R essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase complement(1473049..1473627) Bartonella grahamii as4aup 7998273 YP_002972215.1 CDS secY NC_012846.1 1473624 1474970 R forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY complement(1473624..1474970) Bartonella grahamii as4aup 7998274 YP_002972216.1 CDS rplO NC_012846.1 1475131 1475598 R late assembly protein; 50S ribosomal protein L15 complement(1475131..1475598) Bartonella grahamii as4aup 7998275 YP_002972217.1 CDS rpmD NC_012846.1 1475619 1475825 R L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 complement(1475619..1475825) Bartonella grahamii as4aup 7998276 YP_002972218.1 CDS rpsE NC_012846.1 1475857 1476405 R located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 complement(1475857..1476405) Bartonella grahamii as4aup 7998277 YP_002972219.1 CDS rplR NC_012846.1 1476517 1476879 R binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 complement(1476517..1476879) Bartonella grahamii as4aup 7998278 YP_002972220.1 CDS rplF NC_012846.1 1476892 1477425 R ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 complement(1476892..1477425) Bartonella grahamii as4aup 7998279 YP_002972221.1 CDS rpsH NC_012846.1 1477465 1477863 R binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 complement(1477465..1477863) Bartonella grahamii as4aup 7998280 YP_002972222.1 CDS rpsN NC_012846.1 1477878 1478183 R located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 complement(1477878..1478183) Bartonella grahamii as4aup 7998281 YP_002972223.1 CDS rplE NC_012846.1 1478208 1478765 R part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 complement(1478208..1478765) Bartonella grahamii as4aup 7998282 YP_002972224.1 CDS rplX NC_012846.1 1478758 1479072 R assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 complement(1478758..1479072) Bartonella grahamii as4aup 7998283 YP_002972225.1 CDS rplN NC_012846.1 1479085 1479453 R binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 complement(1479085..1479453) Bartonella grahamii as4aup 7998284 YP_002972226.1 CDS rpsQ NC_012846.1 1479598 1479837 R primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 complement(1479598..1479837) Bartonella grahamii as4aup 7998285 YP_002972227.1 CDS rpmC NC_012846.1 1479849 1480049 R one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 complement(1479849..1480049) Bartonella grahamii as4aup 7998286 YP_002972228.1 CDS rplP NC_012846.1 1480062 1480475 R located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 complement(1480062..1480475) Bartonella grahamii as4aup 7998287 YP_002972229.1 CDS rpsC NC_012846.1 1480512 1481222 R forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 complement(1480512..1481222) Bartonella grahamii as4aup 7998288 YP_002972230.1 CDS rplV NC_012846.1 1481222 1481611 R binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 complement(1481222..1481611) Bartonella grahamii as4aup 7998289 YP_002972231.1 CDS rpsS NC_012846.1 1481614 1481892 R protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 complement(1481614..1481892) Bartonella grahamii as4aup 7998290 YP_002972232.1 CDS rplB NC_012846.1 1481908 1482741 R one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 complement(1481908..1482741) Bartonella grahamii as4aup 7998291 YP_002972233.1 CDS rplW NC_012846.1 1482763 1483056 R binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 complement(1482763..1483056) Bartonella grahamii as4aup 7998292 YP_002972234.1 CDS rplD NC_012846.1 1483053 1483673 R L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 complement(1483053..1483673) Bartonella grahamii as4aup 7998293 YP_002972235.1 CDS rplC NC_012846.1 1483676 1484413 R binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 complement(1483676..1484413) Bartonella grahamii as4aup 7998294 YP_002972236.1 CDS rpsJ NC_012846.1 1484441 1484749 R NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 complement(1484441..1484749) Bartonella grahamii as4aup 7998295 YP_002972237.1 CDS tuf2 NC_012846.1 1484811 1485986 R EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu complement(1484811..1485986) Bartonella grahamii as4aup 7998296 YP_002972238.1 CDS fusA NC_012846.1 1486049 1488133 R EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G complement(1486049..1488133) Bartonella grahamii as4aup 7998297 YP_002972239.1 CDS rpsG NC_012846.1 1488158 1488628 R binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 complement(1488158..1488628) Bartonella grahamii as4aup 7998298 YP_002972240.1 CDS rpsL NC_012846.1 1488647 1489018 R interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 complement(1488647..1489018) Bartonella grahamii as4aup 7998299 YP_002972241.1 CDS xthA1 NC_012846.1 1489509 1490291 D exodeoxyribonuclease III 1489509..1490291 Bartonella grahamii as4aup 7998300 YP_002972242.1 CDS gltI NC_012846.1 1490414 1491319 D glutamate-aspartate ABC transporter periplasmic component GltI 1490414..1491319 Bartonella grahamii as4aup 7998301 YP_002972243.1 CDS gltJ NC_012846.1 1491461 1492213 D glutamate-aspartate ABC transporter permease component GltJ 1491461..1492213 Bartonella grahamii as4aup 7998302 YP_002972244.1 CDS gltK NC_012846.1 1492216 1492932 D glutamate-aspartate ABC transporter permease component GltK 1492216..1492932 Bartonella grahamii as4aup 7998303 YP_002972245.1 CDS gltL NC_012846.1 1492944 1493690 D glutamate-aspartate ABC transporter ATP-binding component GltL 1492944..1493690 Bartonella grahamii as4aup 7998304 YP_002972246.1 CDS exoR NC_012846.1 1493793 1494584 R exopolysacchride production negative regulator ExoR complement(1493793..1494584) Bartonella grahamii as4aup 7998305 YP_002972247.1 CDS valS NC_012846.1 1495725 1498448 R valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase complement(1495725..1498448) Bartonella grahamii as4aup 7998307 YP_002972248.1 CDS Bgr_13400 NC_012846.1 1498586 1499152 R hypothetical protein complement(1498586..1499152) Bartonella grahamii as4aup 7998308 YP_002972249.1 CDS tolC NC_012846.1 1499413 1500705 R type I secretion outer membrane protein TolC complement(1499413..1500705) Bartonella grahamii as4aup 7998309 YP_002972250.1 CDS pcm2 NC_012846.1 1500763 1501437 R protein-L-isoaspartate O-methyltransferase complement(1500763..1501437) Bartonella grahamii as4aup 7998310 YP_002972251.1 CDS rhlE NC_012846.1 1503372 1504754 R ATP-dependent RNA helicase complement(1503372..1504754) Bartonella grahamii as4aup 7998313 YP_002972252.1 CDS Bgr_13460 NC_012846.1 1505047 1505580 R hypothetical protein complement(1505047..1505580) Bartonella grahamii as4aup 7998314 YP_002972253.1 CDS ilvA NC_012846.1 1505613 1506878 R catalyzes the formation of 2-oxobutanoate from L-threonine; biosynthetic; threonine dehydratase complement(1505613..1506878) Bartonella grahamii as4aup 7998315 YP_002972254.1 CDS Bgr_13490 NC_012846.1 1507379 1507531 R hypothetical protein complement(1507379..1507531) Bartonella grahamii as4aup 7998317 YP_002972255.1 CDS Bgr_13530 NC_012846.1 1509755 1510084 D phage related protein 1509755..1510084 Bartonella grahamii as4aup 7998321 YP_002972256.1 CDS Bgr_13560 NC_012846.1 1512363 1512971 D 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase 1512363..1512971 Bartonella grahamii as4aup 7998324 YP_002972257.1 CDS cycA1 NC_012846.1 1514211 1515611 D D-serine/D-alanine/glycine transporter 1514211..1515611 Bartonella grahamii as4aup 7998326 YP_002972258.1 CDS cycA2 NC_012846.1 1516626 1518017 D D-serine/D-alanine/glycine transporter 1516626..1518017 Bartonella grahamii as4aup 7998327 YP_002972259.1 CDS ilvC NC_012846.1 1518132 1519151 R catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase complement(1518132..1519151) Bartonella grahamii as4aup 7998328 YP_002972260.1 CDS pdxJ NC_012846.1 1520306 1521040 R involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase complement(1520306..1521040) Bartonella grahamii as4aup 7998329 YP_002972261.1 CDS Bgr_13620 NC_012846.1 1521125 1522246 R exodeoxyribonuclease V complement(1521125..1522246) Bartonella grahamii as4aup 7998330 YP_002972262.1 CDS Bgr_13640 NC_012846.1 1523281 1524207 D D-isomer specific 2-hydroxyacid dehydrogenase 1523281..1524207 Bartonella grahamii as4aup 7998332 YP_002972263.1 CDS ilvB NC_012846.1 1527362 1529161 R acetolactate synthase 3 catalytic subunit complement(1527362..1529161) Bartonella grahamii as4aup 7998335 YP_002972264.1 CDS miaA NC_012846.1 1529431 1530303 R IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase complement(1529431..1530303) Bartonella grahamii as4aup 7998336 YP_002972265.1 CDS htrA3 NC_012846.1 1531239 1532765 R serine protease complement(1531239..1532765) Bartonella grahamii as4aup 7998337 YP_002972266.1 CDS hflC NC_012846.1 1532915 1533850 R FtsH protease activity modulator HflC complement(1532915..1533850) Bartonella grahamii as4aup 7998338 YP_002972267.1 CDS hflK NC_012846.1 1533853 1534998 R protease subunit HflK complement(1533853..1534998) Bartonella grahamii as4aup 7998339 YP_002972268.1 CDS folA NC_012846.1 1535111 1535620 R dihydrofolate reductase FolA complement(1535111..1535620) Bartonella grahamii as4aup 7998340 YP_002972269.1 CDS thyA NC_012846.1 1535617 1536411 R ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase complement(1535617..1536411) Bartonella grahamii as4aup 7998341 YP_002972270.1 CDS kgtP1 NC_012846.1 1536606 1537913 D alpha-ketoglutarate permease 1536606..1537913 Bartonella grahamii as4aup 7998342 YP_002972271.1 CDS kgtP2 NC_012846.1 1538502 1539812 D alpha-ketoglutarate permease 1538502..1539812 Bartonella grahamii as4aup 7998343 YP_002972272.1 CDS kgtP3 NC_012846.1 1540479 1541780 D alpha-ketoglutarate permease 1540479..1541780 Bartonella grahamii as4aup 7998344 YP_002972273.1 CDS Bgr_13770 NC_012846.1 1541855 1542160 R hypothetical protein complement(1541855..1542160) Bartonella grahamii as4aup 7998345 YP_002972274.1 CDS Bgr_13790 NC_012846.1 1542795 1543340 D hypothetical protein 1542795..1543340 Bartonella grahamii as4aup 7998347 YP_002972275.1 CDS Bgr_13800 NC_012846.1 1543349 1543531 D hypothetical protein 1543349..1543531 Bartonella grahamii as4aup 7998348 YP_002972276.1 CDS Bgr_13810 NC_012846.1 1543542 1543793 D hypothetical protein 1543542..1543793 Bartonella grahamii as4aup 7998349 YP_002972277.1 CDS uvrD NC_012846.1 1543914 1546253 D DNA helicase II 1543914..1546253 Bartonella grahamii as4aup 7998350 YP_002972278.1 CDS cat NC_012846.1 1546310 1546939 R chloramphenicol acetyltransferase complement(1546310..1546939) Bartonella grahamii as4aup 7998351 YP_002972279.1 CDS senC NC_012846.1 1547076 1547657 D cytochrome-c oxidase assembly factor 1547076..1547657 Bartonella grahamii as4aup 7998352 YP_002972280.1 CDS prmA NC_012846.1 1547685 1548554 D methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; ribosomal protein L11 methyltransferase 1547685..1548554 Bartonella grahamii as4aup 7998353 YP_002972281.1 CDS Bgr_13860 NC_012846.1 1548577 1550403 D aminopeptidase P 1548577..1550403 Bartonella grahamii as4aup 7998354 YP_002972282.1 CDS ligA NC_012846.1 1551008 1553167 R this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; NAD-dependent DNA ligase LigA complement(1551008..1553167) Bartonella grahamii as4aup 7998355 YP_002972283.1 CDS recN NC_012846.1 1553278 1554939 R DNA repair protein RecN complement(1553278..1554939) Bartonella grahamii as4aup 7998356 YP_002972284.1 CDS comL NC_012846.1 1554946 1555839 R competence lipoprotein ComL precursor complement(1554946..1555839) Bartonella grahamii as4aup 7998357 YP_002972285.1 CDS lpxC NC_012846.1 1555998 1556882 R zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase complement(1555998..1556882) Bartonella grahamii as4aup 7998358 YP_002972286.1 CDS ftsZ NC_012846.1 1557097 1558869 R GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ complement(1557097..1558869) Bartonella grahamii as4aup 7998359 YP_002972287.1 CDS ftsA NC_012846.1 1558933 1560231 R cell division protein FtsA complement(1558933..1560231) Bartonella grahamii as4aup 7998360 YP_002972288.1 CDS ftsQ NC_012846.1 1560231 1561142 R cell division protein FtsQ complement(1560231..1561142) Bartonella grahamii as4aup 7998361 YP_002972289.1 CDS ddl NC_012846.1 1561130 1562050 R D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase complement(1561130..1562050) Bartonella grahamii as4aup 7998362 YP_002972290.1 CDS murB NC_012846.1 1562289 1563272 R catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase complement(1562289..1563272) Bartonella grahamii as4aup 7998363 YP_002972291.1 CDS murC NC_012846.1 1563244 1564671 R Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase complement(1563244..1564671) Bartonella grahamii as4aup 7998364 YP_002972292.1 CDS murG NC_012846.1 1564655 1565791 R UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; UDP diphospho-muramoyl pentapeptide beta-N acetylglucosaminyl transferase complement(1564655..1565791) Bartonella grahamii as4aup 7998365 YP_002972293.1 CDS ftsW NC_012846.1 1565784 1566938 R cell division protein FtsW complement(1565784..1566938) Bartonella grahamii as4aup 7998366 YP_002972294.1 CDS murD NC_012846.1 1567082 1568476 R UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase complement(1567082..1568476) Bartonella grahamii as4aup 7998367 YP_002972295.1 CDS mraY NC_012846.1 1568481 1569551 R First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase complement(1568481..1569551) Bartonella grahamii as4aup 7998368 YP_002972296.1 CDS murF NC_012846.1 1569573 1570994 R UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate-D-alanyl-D-alanine ligase complement(1569573..1570994) Bartonella grahamii as4aup 7998369 YP_002972297.1 CDS murE NC_012846.1 1570991 1572442 R involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase complement(1570991..1572442) Bartonella grahamii as4aup 7998370 YP_002972298.1 CDS ftsI NC_012846.1 1572465 1574207 R penicillin-binding protein complement(1572465..1574207) Bartonella grahamii as4aup 7998371 YP_002972299.1 CDS Bgr_14040 NC_012846.1 1574207 1574611 R hypothetical protein complement(1574207..1574611) Bartonella grahamii as4aup 7998372 YP_002972300.1 CDS mraW NC_012846.1 1574608 1575606 R S-adenosyl-methyltransferase MraW complement(1574608..1575606) Bartonella grahamii as4aup 7998373 YP_002972301.1 CDS Bgr_14070 NC_012846.1 1576343 1576852 R hypothetical protein complement(1576343..1576852) Bartonella grahamii as4aup 7998375 YP_002972302.1 CDS Bgr_14090 NC_012846.1 1578161 1578538 R hypothetical protein complement(1578161..1578538) Bartonella grahamii as4aup 7998377 YP_002972303.1 CDS Bgr_14110 NC_012846.1 1581099 1582037 R transcriptional regulator, ArsR family complement(1581099..1582037) Bartonella grahamii as4aup 7998379 YP_002972304.1 CDS Bgr_14120 NC_012846.1 1582709 1584358 R ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; putative ABC transporter ATP-binding protein complement(1582709..1584358) Bartonella grahamii as4aup 7998380 YP_002972305.1 CDS Bgr_14130 NC_012846.1 1584521 1585057 D hypothetical membrane protein 1584521..1585057 Bartonella grahamii as4aup 7998381 YP_002972306.1 CDS pncA NC_012846.1 1585104 1585712 D pyrazinamidase /nicotinamidase Pnca 1585104..1585712 Bartonella grahamii as4aup 7998382 YP_002972307.1 CDS Bgr_14150 NC_012846.1 1586173 1587225 R hypothetical protein complement(1586173..1587225) Bartonella grahamii as4aup 7998383 YP_002972308.1 CDS Bgr_14160 NC_012846.1 1587587 1588126 D hypothetical DNA-binding protein 1587587..1588126 Bartonella grahamii as4aup 7998384 YP_002972309.1 CDS Bgr_14170 NC_012846.1 1588519 1588698 D hypothetical protein 1588519..1588698 Bartonella grahamii as4aup 7998385 YP_002972310.1 CDS Bgr_14190 NC_012846.1 1591307 1591489 R hypothetical protein complement(1591307..1591489) Bartonella grahamii as4aup 7998387 YP_002972311.1 CDS omp28 NC_012846.1 1593429 1594172 D outer membrane protein 1593429..1594172 Bartonella grahamii as4aup 7998389 YP_002972312.1 CDS Bgr_14220 NC_012846.1 1594201 1594662 R hypothetical protein complement(1594201..1594662) Bartonella grahamii as4aup 7998390 YP_002972313.1 CDS rpoD NC_012846.1 1595254 1597269 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD complement(1595254..1597269) Bartonella grahamii as4aup 7998391 YP_002972314.1 CDS dnaG NC_012846.1 1597659 1599596 R synthesizes RNA primers at the replication forks; DNA primase complement(1597659..1599596) Bartonella grahamii as4aup 7998392 YP_002972315.1 CDS Bgr_14250 NC_012846.1 1599732 1600949 D mechanosensitive ion channel MscS 1599732..1600949 Bartonella grahamii as4aup 7998393 YP_002972316.1 CDS Bgr_14260 NC_012846.1 1601020 1602711 D Na/Pi-cotransporter family protein 1601020..1602711 Bartonella grahamii as4aup 7998394 YP_002972317.1 CDS Bgr_14270 NC_012846.1 1603574 1603825 D transglycosylase-associated protein 1603574..1603825 Bartonella grahamii as4aup 7998395 YP_002972318.1 CDS ubiC NC_012846.1 1604907 1605416 D catalyzes the formation of 4-hydroxybenzoate from chorismate; chorismate pyruvate lyase 1604907..1605416 Bartonella grahamii as4aup 7998396 YP_002972319.1 CDS Bgr_14290 NC_012846.1 1606092 1606544 R GatB/Yqey domain protein complement(1606092..1606544) Bartonella grahamii as4aup 7998397 YP_002972320.1 CDS carA NC_012846.1 1606802 1607998 D catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 1606802..1607998 Bartonella grahamii as4aup 7998398 YP_002972321.1 CDS tetA NC_012846.1 1608970 1610190 R tetracycline resistance protein complement(1608970..1610190) Bartonella grahamii as4aup 7998400 YP_002972322.1 CDS Bgr_14330 NC_012846.1 1610961 1611797 D hypothetical protein 1610961..1611797 Bartonella grahamii as4aup 7998401 YP_002972323.1 CDS Bgr_14360 NC_012846.1 1613046 1613954 R hypothetical protein complement(1613046..1613954) Bartonella grahamii as4aup 7998403 YP_002972324.1 CDS Bgr_14370 NC_012846.1 1614716 1615525 D 23S ribosomal RNA methyltransferase 1614716..1615525 Bartonella grahamii as4aup 7998404 YP_002972325.1 CDS mnmA NC_012846.1 1615798 1617027 R catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA complement(1615798..1617027) Bartonella grahamii as4aup 7998405 YP_002972326.1 CDS Bgr_14390 NC_012846.1 1617416 1617691 D hypothetical protein 1617416..1617691 Bartonella grahamii as4aup 7998406 YP_002972327.1 CDS Bgr_14400 NC_012846.1 1617838 1618224 R hypothetical protein complement(1617838..1618224) Bartonella grahamii as4aup 7998407 YP_002972328.1 CDS ctrA NC_012846.1 1618789 1619490 D cell cycle transcriptional regulator CtrA 1618789..1619490 Bartonella grahamii as4aup 7998408 YP_002972329.1 CDS Bgr_14420 NC_012846.1 1619715 1620353 R hypothetical protein complement(1619715..1620353) Bartonella grahamii as4aup 7998409 YP_002972330.1 CDS Bgr_14430 NC_012846.1 1620570 1621166 D hypothetical protein 1620570..1621166 Bartonella grahamii as4aup 7998410 YP_002972331.1 CDS Bgr_14450 NC_012846.1 1622163 1623281 R DegT/DnrJ/EryC1/StrS aminotransferase complement(1622163..1623281) Bartonella grahamii as4aup 7998412 YP_002972332.1 CDS Bgr_14460 NC_012846.1 1623331 1624287 R oxidoreductase complement(1623331..1624287) Bartonella grahamii as4aup 7998413 YP_002972333.1 CDS dnaB4 NC_012846.1 1624722 1626167 R unwinds double stranded DNA; replicative DNA helicase complement(1624722..1626167) Bartonella grahamii as4aup 7998415 YP_002972334.1 CDS gpD4 NC_012846.1 1626139 1627170 R phage late control protein D4 complement(1626139..1627170) Bartonella grahamii as4aup 7998416 YP_002972335.1 CDS gpX4 NC_012846.1 1627161 1627415 R phage tail protein X4 complement(1627161..1627415) Bartonella grahamii as4aup 7998417 YP_002972336.1 CDS gpU4 NC_012846.1 1627412 1627873 R phage tail protein U4 complement(1627412..1627873) Bartonella grahamii as4aup 7998418 YP_002972337.1 CDS Bgr_14520 NC_012846.1 1627961 1628302 R hypothetical protein complement(1627961..1628302) Bartonella grahamii as4aup 7998419 YP_002972338.1 CDS Bgr_14540 NC_012846.1 1629056 1629250 D hypothetical protein 1629056..1629250 Bartonella grahamii as4aup 7998421 YP_002972339.1 CDS ibaF NC_012846.1 1630087 1633914 D inducible autotransporter F 1630087..1633914 Bartonella grahamii as4aup 7998422 YP_002972340.1 CDS ibaA NC_012846.1 1634672 1640128 D inducible autotransporter A 1634672..1640128 Bartonella grahamii as4aup 7998423 YP_002972341.1 CDS ibaB NC_012846.1 1641300 1643777 D inducible autotransporter B 1641300..1643777 Bartonella grahamii as4aup 7998424 YP_002972342.1 CDS ibaC NC_012846.1 1644451 1646862 D inducible autotransporter C 1644451..1646862 Bartonella grahamii as4aup 7998425 YP_002972343.1 CDS ibaD NC_012846.1 1647009 1648226 D inducible autotransporter D 1647009..1648226 Bartonella grahamii as4aup 7998426 YP_002972344.1 CDS ibaE NC_012846.1 1648359 1651442 D inducible autotransporter E 1648359..1651442 Bartonella grahamii as4aup 7998427 YP_002972345.1 CDS Bgr_14620 NC_012846.1 1653059 1653463 R hypothetical protein complement(1653059..1653463) Bartonella grahamii as4aup 7998429 YP_002972346.1 CDS Bgr_14630 NC_012846.1 1653502 1654095 D hypothetical membrane protein 1653502..1654095 Bartonella grahamii as4aup 7998430 YP_002972347.1 CDS Bgr_14660 NC_012846.1 1656201 1656602 R hypothetical protein complement(1656201..1656602) Bartonella grahamii as4aup 7998433 YP_002972348.1 CDS Bgr_14680 NC_012846.1 1657325 1657543 R hypothetical protein complement(1657325..1657543) Bartonella grahamii as4aup 7998435 YP_002972349.1 CDS Bgr_14690 NC_012846.1 1657547 1657816 R hypothetical protein complement(1657547..1657816) Bartonella grahamii as4aup 7998436 YP_002972350.1 CDS Bgr_14710 NC_012846.1 1659625 1659855 R hypothetical protein complement(1659625..1659855) Bartonella grahamii as4aup 7998438 YP_002972351.1 CDS parA1 NC_012846.1 1659852 1660481 R chromosome partitioning protein ParA1 complement(1659852..1660481) Bartonella grahamii as4aup 7998439 YP_002972352.1 CDS Bgr_14740 NC_012846.1 1661484 1661813 D hypothetical protein 1661484..1661813 Bartonella grahamii as4aup 7998441 YP_002972353.1 CDS ribF NC_012846.1 1663924 1664892 R catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase complement(1663924..1664892) Bartonella grahamii as4aup 7998443 YP_002972354.1 CDS Bgr_14770 NC_012846.1 1664925 1665770 R hydrolase, haloacid dehalogenase-like family complement(1664925..1665770) Bartonella grahamii as4aup 7998444 YP_002972355.1 CDS Bgr_14780 NC_012846.1 1667008 1667367 D transcriptional regulator 1667008..1667367 Bartonella grahamii as4aup 7998445 YP_002972356.1 CDS Bgr_14800 NC_012846.1 1668998 1669693 R hypothetical protein complement(1668998..1669693) Bartonella grahamii as4aup 7998447 YP_002972357.1 CDS virB2 NC_012846.1 1670135 1670461 D VirB2 protein 1670135..1670461 Bartonella grahamii as4aup 7998448 YP_002972358.1 CDS virB3 NC_012846.1 1670462 1670770 D VirB3 protein 1670462..1670770 Bartonella grahamii as4aup 7998449 YP_002972359.1 CDS virB4 NC_012846.1 1670793 1673147 D VirB4 protein 1670793..1673147 Bartonella grahamii as4aup 7998450 YP_002972360.1 CDS virB5 NC_012846.1 1673144 1673665 D VirB5 protein 1673144..1673665 Bartonella grahamii as4aup 7998451 YP_002972361.1 CDS virB6 NC_012846.1 1673652 1674638 D VirB6 protein 1673652..1674638 Bartonella grahamii as4aup 7998452 YP_002972362.1 CDS virB7 NC_012846.1 1674849 1675151 D VirB7 protein 1674849..1675151 Bartonella grahamii as4aup 7998453 YP_002972363.1 CDS virB8 NC_012846.1 1675141 1675809 D VirB8 protein 1675141..1675809 Bartonella grahamii as4aup 7998454 YP_002972364.1 CDS virB9 NC_012846.1 1675806 1676672 D VirB9 protein 1675806..1676672 Bartonella grahamii as4aup 7998455 YP_002972365.1 CDS virB10 NC_012846.1 1676665 1677825 D VirB10 protein 1676665..1677825 Bartonella grahamii as4aup 7998456 YP_002972366.1 CDS virB11 NC_012846.1 1677822 1678892 D VirB11 protein 1677822..1678892 Bartonella grahamii as4aup 7998457 YP_002972367.1 CDS Bgr_14910 NC_012846.1 1678958 1679173 D hypothetical protein 1678958..1679173 Bartonella grahamii as4aup 7998458 YP_002972368.1 CDS bepA NC_012846.1 1679184 1680818 D BepA protein 1679184..1680818 Bartonella grahamii as4aup 7998459 YP_002972369.1 CDS traG1 NC_012846.1 1680973 1682889 D VirD4 family; conjugal transfer coupling protein TraG 1680973..1682889 Bartonella grahamii as4aup 7998460 YP_002972370.1 CDS Bgr_14940 NC_012846.1 1683893 1684093 D hypothetical protein 1683893..1684093 Bartonella grahamii as4aup 7998461 YP_002972371.1 CDS bepC NC_012846.1 1684104 1685702 D BepC protein 1684104..1685702 Bartonella grahamii as4aup 7998462 YP_002972372.1 CDS bepD NC_012846.1 1686016 1687185 D BepD protein 1686016..1687185 Bartonella grahamii as4aup 7998463 YP_002972373.1 CDS bepH NC_012846.1 1687510 1688340 D BepH protein 1687510..1688340 Bartonella grahamii as4aup 7998464 YP_002972374.1 CDS bepE NC_012846.1 1688666 1689946 D BepE protein 1688666..1689946 Bartonella grahamii as4aup 7998465 YP_002972375.1 CDS bepF NC_012846.1 1690157 1691983 D BepF protein 1690157..1691983 Bartonella grahamii as4aup 7998466 YP_002972376.1 CDS bepI NC_012846.1 1692301 1695510 D BepI protein 1692301..1695510 Bartonella grahamii as4aup 7998467 YP_002972377.1 CDS mviN NC_012846.1 1696368 1697939 D virulence factor MviN 1696368..1697939 Bartonella grahamii as4aup 7998469 YP_002972378.1 CDS trpS NC_012846.1 1698000 1699070 D catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 1698000..1699070 Bartonella grahamii as4aup 7998470 YP_002972379.1 CDS Bgr_15040 NC_012846.1 1699134 1699625 D putative universal stress protein UspA 1699134..1699625 Bartonella grahamii as4aup 7998471 YP_002972380.1 CDS nifU NC_012846.1 1699685 1700263 D nitrogen fixation protein 1699685..1700263 Bartonella grahamii as4aup 7998472 YP_002972381.1 CDS phnA NC_012846.1 1701398 1701733 R alkylphosphonate uptakeprotein complement(1701398..1701733) Bartonella grahamii as4aup 7998473 YP_002972382.1 CDS pgm NC_012846.1 1702799 1704427 R catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; phosphoglucomutase complement(1702799..1704427) Bartonella grahamii as4aup 7998474 YP_002972383.1 CDS Bgr_15080 NC_012846.1 1704646 1705167 D putative peroxiredoxin 1704646..1705167 Bartonella grahamii as4aup 7998475 YP_002972384.1 CDS Bgr_15090 NC_012846.1 1706248 1707414 D phage integrase 1706248..1707414 Bartonella grahamii as4aup 7998476 YP_002972385.1 CDS Bgr_15100 NC_012846.1 1707625 1707825 D hypothetical DNA-binding protein 1707625..1707825 Bartonella grahamii as4aup 7998477 YP_002972386.1 CDS yacA2 NC_012846.1 1708553 1708843 D YacA protein 1708553..1708843 Bartonella grahamii as4aup 7998479 YP_002972387.1 CDS yacB2 NC_012846.1 1708840 1709112 D YacB protein 1708840..1709112 Bartonella grahamii as4aup 7998480 YP_002972388.1 CDS Bgr_15150 NC_012846.1 1709895 1710470 R hypothetical protein complement(1709895..1710470) Bartonella grahamii as4aup 7998482 YP_002972389.1 CDS Bgr_15160 NC_012846.1 1710523 1711089 R hypothetical protein complement(1710523..1711089) Bartonella grahamii as4aup 7998483 YP_002972390.1 CDS Bgr_15170 NC_012846.1 1711144 1711728 R hypothetical protein complement(1711144..1711728) Bartonella grahamii as4aup 7998484 YP_002972391.1 CDS Bgr_15180 NC_012846.1 1711835 1712299 R hypothetical protein complement(1711835..1712299) Bartonella grahamii as4aup 7998485 YP_002972392.1 CDS Bgr_15190 NC_012846.1 1712352 1712921 R hypothetical protein complement(1712352..1712921) Bartonella grahamii as4aup 7998486 YP_002972393.1 CDS Bgr_15200 NC_012846.1 1712974 1713543 R hypothetical protein complement(1712974..1713543) Bartonella grahamii as4aup 7998487 YP_002972394.1 CDS fhaB4 NC_012846.1 1713608 1722040 R filamentous hemagglutinin complement(1713608..1722040) Bartonella grahamii as4aup 7998488 YP_002972395.1 CDS hec5 NC_012846.1 1722131 1723891 R hemolysin activator protein Hec complement(1722131..1723891) Bartonella grahamii as4aup 7998489 YP_002972396.1 CDS dinJ4 NC_012846.1 1724881 1725153 D DNA-damage-inducible protein J 1724881..1725153 Bartonella grahamii as4aup 7998491 YP_002972397.1 CDS Bgr_15290 NC_012846.1 1726488 1727321 D phage related protein 1726488..1727321 Bartonella grahamii as4aup 7998494 YP_002972398.1 CDS Bgr_15300 NC_012846.1 1727399 1727983 D phage related protein 1727399..1727983 Bartonella grahamii as4aup 7998495 YP_002972399.1 CDS Bgr_15310 NC_012846.1 1728094 1728873 D phage related protein 1728094..1728873 Bartonella grahamii as4aup 7998496 YP_002972400.1 CDS Bgr_15320 NC_012846.1 1729618 1729749 D hypothetical protein 1729618..1729749 Bartonella grahamii as4aup 7998497 YP_002972401.1 CDS Bgr_15330 NC_012846.1 1729808 1730389 R Rep related protein complement(1729808..1730389) Bartonella grahamii as4aup 7998498 YP_002972402.1 CDS hisS NC_012846.1 1730891 1732378 R catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase complement(1730891..1732378) Bartonella grahamii as4aup 7998499 YP_002972403.1 CDS pyrF NC_012846.1 1732916 1733761 R type 2 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase complement(1732916..1733761) Bartonella grahamii as4aup 7998500 YP_002972404.1 CDS Bgr_15360 NC_012846.1 1734250 1735338 D hypothetical membrane protein 1734250..1735338 Bartonella grahamii as4aup 7998501 YP_002972405.1 CDS Bgr_15370 NC_012846.1 1735653 1736846 D putative permease of the major facilitator superfamily 1735653..1736846 Bartonella grahamii as4aup 7998502 YP_002972406.1 CDS Bgr_15380 NC_012846.1 1736836 1737015 D hypothetical protein 1736836..1737015 Bartonella grahamii as4aup 7998503 YP_002972407.1 CDS Bgr_15390 NC_012846.1 1737050 1737724 D hypothetical protein 1737050..1737724 Bartonella grahamii as4aup 7998504 YP_002972408.1 CDS Bgr_15410 NC_012846.1 1739483 1740637 D putative permease of the major facilitator superfamily 1739483..1740637 Bartonella grahamii as4aup 7998506 YP_002972409.1 CDS zur NC_012846.1 1754964 1755356 D transcriptional regulator, Fur family 1754964..1755356 Bartonella grahamii as4aup 7998517 YP_002972410.1 CDS vceA NC_012846.1 1755512 1756606 D multidrug resistance protein VceA 1755512..1756606 Bartonella grahamii as4aup 7998518 YP_002972411.1 CDS vceB NC_012846.1 1756629 1758200 D multidrug resistance protein VceB 1756629..1758200 Bartonella grahamii as4aup 7998519 YP_002972412.1 CDS Bgr_15550 NC_012846.1 1759356 1759940 R acetyltransferase complement(1759356..1759940) Bartonella grahamii as4aup 7998520 YP_002972413.1 CDS Bgr_15560 NC_012846.1 1760016 1761149 R ornithine decarboxylase complement(1760016..1761149) Bartonella grahamii as4aup 7998521 YP_002972414.1 CDS Bgr_15580 NC_012846.1 1762852 1763769 R putative rhodanese-related sulfurtransferase protein complement(1762852..1763769) Bartonella grahamii as4aup 7998523 YP_002972415.1 CDS eda NC_012846.1 1763885 1764550 D 2-dehydro-3-deoxyphosphogluconate aldolase / 4- hydroxy-2-oxoglutarate aldolase 1763885..1764550 Bartonella grahamii as4aup 7998524 YP_002972416.1 CDS fpr NC_012846.1 1764995 1765753 R ferredoxin-NADP reductase complement(1764995..1765753) Bartonella grahamii as4aup 7998526 YP_002972417.1 CDS alr NC_012846.1 1766911 1768026 D alanine racemase 1766911..1768026 Bartonella grahamii as4aup 7998527 YP_002972418.1 CDS gcvP NC_012846.1 1769650 1772445 R acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase complement(1769650..1772445) Bartonella grahamii as4aup 7998529 YP_002972419.1 CDS gcvH NC_012846.1 1772451 1772819 R part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H complement(1772451..1772819) Bartonella grahamii as4aup 7998530 YP_002972420.1 CDS gcvT NC_012846.1 1772826 1773938 R catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T complement(1772826..1773938) Bartonella grahamii as4aup 7998531 YP_002972421.1 CDS lon2 NC_012846.1 1774620 1775282 D ATP-dependent protease 1774620..1775282 Bartonella grahamii as4aup 7998532 YP_002972422.1 CDS Bgr_15680 NC_012846.1 1775305 1775502 D hypothetical protein 1775305..1775502 Bartonella grahamii as4aup 7998533 YP_002972423.1 CDS Bgr_15690 NC_012846.1 1776168 1776299 R hypothetical protein complement(1776168..1776299) Bartonella grahamii as4aup 7998534 YP_002972424.1 CDS Bgr_15700 NC_012846.1 1777037 1777816 R phage related protein complement(1777037..1777816) Bartonella grahamii as4aup 7998535 YP_002972425.1 CDS Bgr_15710 NC_012846.1 1777907 1778365 R phage related protein complement(1777907..1778365) Bartonella grahamii as4aup 7998536 YP_002972426.1 CDS Bgr_15720 NC_012846.1 1778443 1779276 R phage related protein complement(1778443..1779276) Bartonella grahamii as4aup 7998537 YP_002972427.1 CDS dinJ5 NC_012846.1 1780611 1780883 R DNA-damage-inducible protein J complement(1780611..1780883) Bartonella grahamii as4aup 7998540 YP_002972428.1 CDS hec6 NC_012846.1 1781873 1783633 D hemolysin activator protein Hec 1781873..1783633 Bartonella grahamii as4aup 7998542 YP_002972429.1 CDS fhaB5 NC_012846.1 1783724 1792156 D filamentous hemagglutinin 1783724..1792156 Bartonella grahamii as4aup 7998543 YP_002972430.1 CDS Bgr_15790 NC_012846.1 1792221 1792793 D hypothetical protein 1792221..1792793 Bartonella grahamii as4aup 7998544 YP_002972431.1 CDS Bgr_15800 NC_012846.1 1792846 1793331 D hypothetical protein 1792846..1793331 Bartonella grahamii as4aup 7998545 YP_002972432.1 CDS Bgr_15810 NC_012846.1 1793328 1793801 D hypothetical protein 1793328..1793801 Bartonella grahamii as4aup 7998546 YP_002972433.1 CDS Bgr_15820 NC_012846.1 1793798 1794265 D hypothetical protein 1793798..1794265 Bartonella grahamii as4aup 7998547 YP_002972434.1 CDS Bgr_15850 NC_012846.1 1803259 1804866 R hypothetical protein complement(1803259..1804866) Bartonella grahamii as4aup 7998550 YP_002972435.1 CDS Bgr_15860 NC_012846.1 1804879 1805802 R virulence-associated protein E complement(1804879..1805802) Bartonella grahamii as4aup 7998551 YP_002972436.1 CDS Bgr_15870 NC_012846.1 1805878 1806078 R hypothetical DNA-binding protein complement(1805878..1806078) Bartonella grahamii as4aup 7998552 YP_002972437.1 CDS Bgr_15880 NC_012846.1 1806255 1807436 R phage integrase complement(1806255..1807436) Bartonella grahamii as4aup 7998553 YP_002972438.1 CDS Bgr_15890 NC_012846.1 1807663 1808043 D transcriptional regulator 1807663..1808043 Bartonella grahamii as4aup 7998554 YP_002972439.1 CDS asd NC_012846.1 1809315 1810346 D catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase 1809315..1810346 Bartonella grahamii as4aup 7998555 YP_002972440.1 CDS Bgr_15910 NC_012846.1 1810628 1811260 R SH3-domain protein complement(1810628..1811260) Bartonella grahamii as4aup 7998556 YP_002972441.1 CDS yaeC NC_012846.1 1811781 1812599 D lipoprotein 1811781..1812599 Bartonella grahamii as4aup 7998557 YP_002972442.1 CDS Bgr_15930 NC_012846.1 1812627 1813661 D ABC transporter ATP-binding protein 1812627..1813661 Bartonella grahamii as4aup 7998558 YP_002972443.1 CDS Bgr_15940 NC_012846.1 1813654 1814313 D ABC transporter permease 1813654..1814313 Bartonella grahamii as4aup 7998559 YP_002972444.1 CDS nodN NC_012846.1 1815258 1815737 R nodulation protein N complement(1815258..1815737) Bartonella grahamii as4aup 7998561 YP_002972445.1 CDS Bgr_15970 NC_012846.1 1815901 1817235 D homoserine dehydrogenase 1815901..1817235 Bartonella grahamii as4aup 7998562 YP_002972446.1 CDS Bgr_15980 NC_012846.1 1818025 1818381 R hypothetical membrane protein complement(1818025..1818381) Bartonella grahamii as4aup 7998563 YP_002972447.1 CDS Bgr_16000 NC_012846.1 1820678 1821421 D creatinine amidohydrolase 1820678..1821421 Bartonella grahamii as4aup 7998565 YP_002972448.1 CDS Bgr_16010 NC_012846.1 1821443 1822465 D cobalamin synthesis protein, P47K family 1821443..1822465 Bartonella grahamii as4aup 7998566 YP_002972449.1 CDS Bgr_16020 NC_012846.1 1822476 1823447 D WD-repeat family protein 1822476..1823447 Bartonella grahamii as4aup 7998567 YP_002972450.1 CDS Bgr_16030 NC_012846.1 1823702 1827340 R autotransporter complement(1823702..1827340) Bartonella grahamii as4aup 7998568 YP_002972451.1 CDS Bgr_16040 NC_012846.1 1827493 1830981 R autotransporter complement(1827493..1830981) Bartonella grahamii as4aup 7998569 YP_002972452.1 CDS Bgr_16060 NC_012846.1 1834055 1837480 R autotransporter complement(1834055..1837480) Bartonella grahamii as4aup 7998571 YP_002972453.1 CDS Bgr_16070 NC_012846.1 1837924 1840764 R autotransporter complement(1837924..1840764) Bartonella grahamii as4aup 7998572 YP_002972454.1 CDS Bgr_16080 NC_012846.1 1841926 1845030 R autotransporter complement(1841926..1845030) Bartonella grahamii as4aup 7998573 YP_002972455.1 CDS Bgr_16090 NC_012846.1 1845735 1852154 R autotransporter complement(1845735..1852154) Bartonella grahamii as4aup 7998574 YP_002972456.1 CDS fatB NC_012846.1 1852352 1853302 D ferric anguibactin-binding protein 1852352..1853302 Bartonella grahamii as4aup 7998575 YP_002972457.1 CDS fatD NC_012846.1 1853405 1854361 D ferric anguibactin transport system permease protein 1853405..1854361 Bartonella grahamii as4aup 7998576 YP_002972458.1 CDS fatC NC_012846.1 1854354 1855304 D ferric anguibactin transport system permease protein 1854354..1855304 Bartonella grahamii as4aup 7998577 YP_002972459.1 CDS ceuD NC_012846.1 1855301 1856059 D iron compound ABC transporter, ATP-binding protein 1855301..1856059 Bartonella grahamii as4aup 7998578 YP_002972460.1 CDS dnaB5 NC_012846.1 1856351 1857796 R unwinds double stranded DNA; replicative DNA helicase complement(1856351..1857796) Bartonella grahamii as4aup 7998580 YP_002972461.1 CDS gpD5 NC_012846.1 1857768 1858799 R phage late control protein D5 complement(1857768..1858799) Bartonella grahamii as4aup 7998581 YP_002972462.1 CDS gpX5 NC_012846.1 1858790 1859044 R phage tail protein X5 complement(1858790..1859044) Bartonella grahamii as4aup 7998582 YP_002972463.1 CDS gpU5 NC_012846.1 1859041 1859502 R phage tail protein U5 complement(1859041..1859502) Bartonella grahamii as4aup 7998583 YP_002972464.1 CDS Bgr_16190 NC_012846.1 1859589 1861925 R phage tail protein complement(1859589..1861925) Bartonella grahamii as4aup 7998584 YP_002972465.1 CDS Bgr_16200 NC_012846.1 1862057 1862470 R hypothetical protein complement(1862057..1862470) Bartonella grahamii as4aup 7998585 YP_002972466.1 CDS gpFII NC_012846.1 1862480 1862998 R phage tail tube protein FII complement(1862480..1862998) Bartonella grahamii as4aup 7998586 YP_002972467.1 CDS gpFI NC_012846.1 1863002 1864198 R phage tail sheath protein FI complement(1863002..1864198) Bartonella grahamii as4aup 7998587 YP_002972468.1 CDS Bgr_16230 NC_012846.1 1864291 1864500 R 4-oxalocrotonate tautomerase complement(1864291..1864500) Bartonella grahamii as4aup 7998588 YP_002972469.1 CDS Bgr_16240 NC_012846.1 1864515 1865939 R hypothetical protein complement(1864515..1865939) Bartonella grahamii as4aup 7998589 YP_002972470.1 CDS Bgr_16250 NC_012846.1 1865845 1867713 R hypothetical protein complement(1865845..1867713) Bartonella grahamii as4aup 7998590 YP_002972471.1 CDS yjiJ NC_012846.1 1867809 1868987 R putative sugar transporter complement(1867809..1868987) Bartonella grahamii as4aup 7998591 YP_002972472.1 CDS gpW3 NC_012846.1 1870127 1870489 R phage baseplate assembly protein gpW3 complement(1870127..1870489) Bartonella grahamii as4aup 7998593 YP_002972473.1 CDS Bgr_16290 NC_012846.1 1870493 1870693 R hypothetical protein complement(1870493..1870693) Bartonella grahamii as4aup 7998594 YP_002972474.1 CDS Bgr_16300 NC_012846.1 1870712 1870999 R phage baseplate assembly protein gpW (fragment) complement(1870712..1870999) Bartonella grahamii as4aup 7998595 YP_002972475.1 CDS Bgr_16310 NC_012846.1 1871104 1871430 R hypothetical protein complement(1871104..1871430) Bartonella grahamii as4aup 7998596 YP_002972476.1 CDS mccC NC_012846.1 1873453 1874673 D MccC protein 1873453..1874673 Bartonella grahamii as4aup 7998598 YP_002972477.1 CDS Bgr_16380 NC_012846.1 1876518 1877717 D outer membrane protein, porin 1876518..1877717 Bartonella grahamii as4aup 7998602 YP_002972478.1 CDS ampD NC_012846.1 1879019 1879825 R N-acetylmuramoyl-L-alanine amidase complement(1879019..1879825) Bartonella grahamii as4aup 7998603 YP_002972479.1 CDS Bgr_16400 NC_012846.1 1880685 1882859 R hypothetical protein complement(1880685..1882859) Bartonella grahamii as4aup 7998604 YP_002972480.1 CDS Bgr_16410 NC_012846.1 1882856 1883587 R hypothetical protein complement(1882856..1883587) Bartonella grahamii as4aup 7998605 YP_002972481.1 CDS Bgr_16420 NC_012846.1 1883849 1885045 R multidrug resistance transporter, Bcr/CflA family complement(1883849..1885045) Bartonella grahamii as4aup 7998606 YP_002972482.1 CDS Bgr_16430 NC_012846.1 1885677 1885850 D hypothetical protein 1885677..1885850 Bartonella grahamii as4aup 7998607 YP_002972483.1 CDS Bgr_16440 NC_012846.1 1885860 1886396 D putative phage related protein 1885860..1886396 Bartonella grahamii as4aup 7998608 YP_002972484.1 CDS Bgr_16450 NC_012846.1 1886752 1887840 D hypothetical membrane protein 1886752..1887840 Bartonella grahamii as4aup 7998609 YP_002972485.1 CDS Bgr_16470 NC_012846.1 1890388 1891434 D hypothetical protein 1890388..1891434 Bartonella grahamii as4aup 7998611 YP_002972486.1 CDS Bgr_16550 NC_012846.1 1899954 1901939 D peptidase, M23/M37 family 1899954..1901939 Bartonella grahamii as4aup 7998619 YP_002972487.1 CDS Bgr_16560 NC_012846.1 1902787 1904241 R sensor histidine kinase complement(1902787..1904241) Bartonella grahamii as4aup 7998620 YP_002972488.1 CDS sigH NC_012846.1 1904433 1904987 R Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor complement(1904433..1904987) Bartonella grahamii as4aup 7998621 YP_002972489.1 CDS Bgr_16580 NC_012846.1 1904995 1905198 R hypothetical protein complement(1904995..1905198) Bartonella grahamii as4aup 7998622 YP_002972490.1 CDS Bgr_16590 NC_012846.1 1905367 1906161 D in Caulobacter crescentus, CC3477 is differentially expressed in minimal salts media with glucose as compared to complex media; two-component response regulator 1905367..1906161 Bartonella grahamii as4aup 7998623 YP_002972491.1 CDS Bgr_16600 NC_012846.1 1906184 1907197 D sensory transduction histidine kinase 1906184..1907197 Bartonella grahamii as4aup 7998624 YP_002972492.1 CDS Bgr_16620 NC_012846.1 1908673 1909038 D hypothetical protein 1908673..1909038 Bartonella grahamii as4aup 7998626 YP_002972493.1 CDS Bgr_16630 NC_012846.1 1909082 1909531 D hypothetical membrane protein 1909082..1909531 Bartonella grahamii as4aup 7998627 YP_002972494.1 CDS Bgr_16640 NC_012846.1 1909811 1910554 R hypothetical protein complement(1909811..1910554) Bartonella grahamii as4aup 7998628 YP_002972495.1 CDS Bgr_16650 NC_012846.1 1912238 1912681 R hypothetical membrane protein complement(1912238..1912681) Bartonella grahamii as4aup 7998629 YP_002972496.1 CDS Bgr_16670 NC_012846.1 1915998 1916504 R hypothetical protein complement(1915998..1916504) Bartonella grahamii as4aup 7998631 YP_002972497.1 CDS Bgr_16690 NC_012846.1 1919153 1920292 R putative phage related protein complement(1919153..1920292) Bartonella grahamii as4aup 7998633 YP_002972498.1 CDS Bgr_16700 NC_012846.1 1920289 1920771 R hypothetical protein complement(1920289..1920771) Bartonella grahamii as4aup 7998634 YP_002972499.1 CDS Bgr_16710 NC_012846.1 1921051 1922514 R hypothetical protein complement(1921051..1922514) Bartonella grahamii as4aup 7998635 YP_002972500.1 CDS Bgr_16720 NC_012846.1 1923019 1923714 R hypothetical protein complement(1923019..1923714) Bartonella grahamii as4aup 7998636 YP_002972501.1 CDS Bgr_16730 NC_012846.1 1923797 1924915 R phage related protein complement(1923797..1924915) Bartonella grahamii as4aup 7998637 YP_002972502.1 CDS Bgr_16740 NC_012846.1 1925209 1925982 R hypothetical protein complement(1925209..1925982) Bartonella grahamii as4aup 7998638 YP_002972503.1 CDS Bgr_16750 NC_012846.1 1926292 1928142 R putative phage portal protein complement(1926292..1928142) Bartonella grahamii as4aup 7998639 YP_002972504.1 CDS Bgr_16760 NC_012846.1 1928127 1929488 R phage terminase large subunit complement(1928127..1929488) Bartonella grahamii as4aup 7998640 YP_002972505.1 CDS Bgr_16770 NC_012846.1 1930692 1931021 R hypothetical protein complement(1930692..1931021) Bartonella grahamii as4aup 7998641 YP_002972506.1 CDS Bgr_16820 NC_012846.1 1935402 1936499 R putative MFS transporter complement(1935402..1936499) Bartonella grahamii as4aup 7998646 YP_002972507.1 CDS Bgr_16830 NC_012846.1 1937377 1937748 D transcriptional regulator 1937377..1937748 Bartonella grahamii as4aup 7998647 YP_002972508.1 CDS Bgr_16850 NC_012846.1 1938405 1938878 D transcriptional regulator 1938405..1938878 Bartonella grahamii as4aup 7998649 YP_002972509.1 CDS Bgr_16870 NC_012846.1 1939528 1939998 D transcriptional regulator 1939528..1939998 Bartonella grahamii as4aup 7998651 YP_002972510.1 CDS Bgr_16880 NC_012846.1 1940323 1941393 R putative phage head protein complement(1940323..1941393) Bartonella grahamii as4aup 7998652 YP_002972511.1 CDS clpB NC_012846.1 1942231 1944810 R ATP-dependent clp protease, ATP-binding subunit ClpB complement(1942231..1944810) Bartonella grahamii as4aup 7998653 YP_002972512.1 CDS Bgr_16900 NC_012846.1 1945366 1946388 D hypothetical protein 1945366..1946388 Bartonella grahamii as4aup 7998654 YP_002972513.1 CDS Bgr_16920 NC_012846.1 1948540 1948911 D transcriptional regulator 1948540..1948911 Bartonella grahamii as4aup 7998656 YP_002972514.1 CDS Bgr_16940 NC_012846.1 1949492 1949623 R hypothetical protein complement(1949492..1949623) Bartonella grahamii as4aup 7998658 YP_002972515.1 CDS Bgr_16950 NC_012846.1 1950772 1951551 R phage related protein complement(1950772..1951551) Bartonella grahamii as4aup 7998659 YP_002972516.1 CDS Bgr_16960 NC_012846.1 1951642 1952100 R phage related protein complement(1951642..1952100) Bartonella grahamii as4aup 7998660 YP_002972517.1 CDS Bgr_16970 NC_012846.1 1952178 1953011 R phage related protein complement(1952178..1953011) Bartonella grahamii as4aup 7998661 YP_002972518.1 CDS dinJ6 NC_012846.1 1954346 1954618 R DNA-damage-inducible protein J complement(1954346..1954618) Bartonella grahamii as4aup 7998664 YP_002972519.1 CDS hec7 NC_012846.1 1955609 1957369 D hemolysin activator protein Hec 1955609..1957369 Bartonella grahamii as4aup 7998666 YP_002972520.1 CDS fhaB6 NC_012846.1 1957460 1965514 D filamentous hemagglutinin 1957460..1965514 Bartonella grahamii as4aup 7998667 YP_002972521.1 CDS Bgr_17050 NC_012846.1 1966010 1968622 D hypothetical protein 1966010..1968622 Bartonella grahamii as4aup 7998669 YP_002972522.1 CDS Bgr_17070 NC_012846.1 1974989 1976596 R hypothetical protein complement(1974989..1976596) Bartonella grahamii as4aup 7998671 YP_002972523.1 CDS Bgr_17080 NC_012846.1 1976609 1977532 R virulence-associated protein E complement(1976609..1977532) Bartonella grahamii as4aup 7998672 YP_002972524.1 CDS Bgr_17090 NC_012846.1 1977608 1977808 R hypothetical DNA-binding protein complement(1977608..1977808) Bartonella grahamii as4aup 7998673 YP_002972525.1 CDS Bgr_17100 NC_012846.1 1977985 1979166 R phage integrase complement(1977985..1979166) Bartonella grahamii as4aup 7998674 YP_002972526.1 CDS Bgr_17110 NC_012846.1 1979394 1979765 D transcriptional regulator 1979394..1979765 Bartonella grahamii as4aup 7998675 YP_002972527.1 CDS Bgr_17120 NC_012846.1 1980197 1981345 R putative permease of the major facilitator superfamily complement(1980197..1981345) Bartonella grahamii as4aup 7998676 YP_002972528.1 CDS Bgr_17130 NC_012846.1 1981852 1982136 R zinc-binding protein complement(1981852..1982136) Bartonella grahamii as4aup 7998677 YP_002972529.1 CDS maf2 NC_012846.1 1982158 1982871 R Maf-like protein complement(1982158..1982871) Bartonella grahamii as4aup 7998678 YP_002972530.1 CDS infA NC_012846.1 1983106 1983324 R stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 complement(1983106..1983324) Bartonella grahamii as4aup 7998679 YP_002972531.1 CDS Bgr_17180 NC_012846.1 1985334 1985699 D transcriptional regulator 1985334..1985699 Bartonella grahamii as4aup 7998682 YP_002972532.1 CDS Bgr_17190 NC_012846.1 1986081 1986434 D transcriptional regulator 1986081..1986434 Bartonella grahamii as4aup 7998683 YP_002972533.1 CDS Bgr_17200 NC_012846.1 1987169 1987597 D hypothetical protein 1987169..1987597 Bartonella grahamii as4aup 7998684 YP_002972534.1 CDS Bgr_17210 NC_012846.1 1988264 1988839 R hypothetical membrane protein complement(1988264..1988839) Bartonella grahamii as4aup 7998685 YP_002972535.1 CDS Bgr_17220 NC_012846.1 1988850 1989002 R hypothetical membrane protein complement(1988850..1989002) Bartonella grahamii as4aup 7998686 YP_002972536.1 CDS purE NC_012846.1 1989816 1990313 D phosphoribosylaminoimidazole carboxylase, catalytic subunit 1989816..1990313 Bartonella grahamii as4aup 7998687 YP_002972537.1 CDS purK NC_012846.1 1990315 1991460 D With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit 1990315..1991460 Bartonella grahamii as4aup 7998688 YP_002972538.1 CDS rpmJ NC_012846.1 1994436 1994564 D smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif; 50S ribosomal protein L36 1994436..1994564 Bartonella grahamii as4aup 7998689 YP_002972539.1 CDS Bgr_17260 NC_012846.1 1994706 1995491 D hypothetical protein 1994706..1995491 Bartonella grahamii as4aup 7998690 YP_002972540.1 CDS Bgr_17290 NC_012846.1 1997155 1997793 D 5-formyltetrahydrofolate cyclo-ligase 1997155..1997793 Bartonella grahamii as4aup 7998693 YP_002972541.1 CDS Bgr_17300 NC_012846.1 1997812 1998633 D metallophosphoesterase 1997812..1998633 Bartonella grahamii as4aup 7998694 YP_002972542.1 CDS Bgr_17310 NC_012846.1 1998993 1999448 R transcriptional regulator complement(1998993..1999448) Bartonella grahamii as4aup 7998695 YP_002972543.1 CDS Bgr_17320 NC_012846.1 1999628 2000083 R transcriptional regulator complement(1999628..2000083) Bartonella grahamii as4aup 7998696 YP_002972544.1 CDS Bgr_17330 NC_012846.1 2000260 2000652 R transcriptional regulator complement(2000260..2000652) Bartonella grahamii as4aup 7998697 YP_002972545.1 CDS traG2 NC_012846.1 2001473 2003383 R VirD4 family; conjugal transfer coupling protein TraG complement(2001473..2003383) Bartonella grahamii as4aup 7998698 YP_002972546.1 CDS murA NC_012846.1 2004711 2006006 R adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(2004711..2006006) Bartonella grahamii as4aup 7998700 YP_002972547.1 CDS Bgr_17370 NC_012846.1 2006168 2006320 R hypothetical protein complement(2006168..2006320) Bartonella grahamii as4aup 7998701 YP_002972548.1 CDS Bgr_17390 NC_012846.1 2007511 2008254 R phage related exonuclease complement(2007511..2008254) Bartonella grahamii as4aup 7998703 YP_002972549.1 CDS Bgr_17400 NC_012846.1 2009006 2009194 R hypothetical protein complement(2009006..2009194) Bartonella grahamii as4aup 7998704 YP_002972550.1 CDS Bgr_17410 NC_012846.1 2009197 2009586 R hypothetical protein complement(2009197..2009586) Bartonella grahamii as4aup 7998705 YP_002972551.1 CDS Bgr_17420 NC_012846.1 2009899 2010216 R hypothetical protein complement(2009899..2010216) Bartonella grahamii as4aup 7998706 YP_002972552.1 CDS Bgr_17430 NC_012846.1 2010633 2011703 D phage related protein 2010633..2011703 Bartonella grahamii as4aup 7998707 YP_002972553.1 CDS Bgr_17450 NC_012846.1 2012361 2014244 D phage related helicase 2012361..2014244 Bartonella grahamii as4aup 7998709 YP_002972554.1 CDS Bgr_17460 NC_012846.1 2014221 2014604 R hypothetical protein complement(2014221..2014604) Bartonella grahamii as4aup 7998710 YP_002972555.1 CDS Bgr_17470 NC_012846.1 2014846 2015529 R hypothetical integral membrane protein complement(2014846..2015529) Bartonella grahamii as4aup 7998711 YP_002972556.1 CDS Bgr_17480 NC_012846.1 2015867 2016358 R hypothetical protein complement(2015867..2016358) Bartonella grahamii as4aup 7998712 YP_002972557.1 CDS Bgr_17490 NC_012846.1 2016460 2017029 D hypothetical protein 2016460..2017029 Bartonella grahamii as4aup 7998713 YP_002972558.1 CDS Bgr_17500 NC_012846.1 2020799 2021122 D hypothetical membrane protein 2020799..2021122 Bartonella grahamii as4aup 7998714 YP_002972559.1 CDS Bgr_17510 NC_012846.1 2021623 2022783 R hypothetical protein complement(2021623..2022783) Bartonella grahamii as4aup 7998715 YP_002972560.1 CDS Bgr_17520 NC_012846.1 2022793 2023170 R hypothetical membrane protein complement(2022793..2023170) Bartonella grahamii as4aup 7998716 YP_002972561.1 CDS Bgr_17530 NC_012846.1 2023915 2024436 R hypothetical membrane protein complement(2023915..2024436) Bartonella grahamii as4aup 7998717 YP_002972562.1 CDS Bgr_17540 NC_012846.1 2024710 2025288 R hypothetical membrane protein complement(2024710..2025288) Bartonella grahamii as4aup 7998718 YP_002972563.1 CDS Bgr_17550 NC_012846.1 2026266 2026829 D NADPH-dependent FMN reductase 2026266..2026829 Bartonella grahamii as4aup 7998719 YP_002972564.1 CDS Bgr_17560 NC_012846.1 2026848 2027363 D short chain dehydrogenase 2026848..2027363 Bartonella grahamii as4aup 7998720 YP_002972565.1 CDS Bgr_17570 NC_012846.1 2029043 2029207 R hypothetical protein complement(2029043..2029207) Bartonella grahamii as4aup 7998721 YP_002972566.1 CDS Bgr_17580 NC_012846.1 2029266 2029832 R hypothetical membrane protein complement(2029266..2029832) Bartonella grahamii as4aup 7998722 YP_002972567.1 CDS Bgr_17590 NC_012846.1 2029837 2030211 R hypothetical membrane protein complement(2029837..2030211) Bartonella grahamii as4aup 7998723 YP_002972568.1 CDS Bgr_17600 NC_012846.1 2030300 2031469 R hypothetical protein complement(2030300..2031469) Bartonella grahamii as4aup 7998724 YP_002972569.1 CDS Bgr_17610 NC_012846.1 2031474 2031794 R hypothetical membrane protein complement(2031474..2031794) Bartonella grahamii as4aup 7998725 YP_002972570.1 CDS Bgr_17620 NC_012846.1 2032050 2032379 R hypothetical membrane protein complement(2032050..2032379) Bartonella grahamii as4aup 7998726 YP_002972571.1 CDS Bgr_17640 NC_012846.1 2033837 2034169 R hypothetical membrane protein complement(2033837..2034169) Bartonella grahamii as4aup 7998728 YP_002972572.1 CDS Bgr_17650 NC_012846.1 2034181 2034378 R hypothetical membrane protein complement(2034181..2034378) Bartonella grahamii as4aup 7998729 YP_002972573.1 CDS Bgr_17660 NC_012846.1 2034368 2034925 R hypothetical membrane protein complement(2034368..2034925) Bartonella grahamii as4aup 7998730 YP_002972574.1 CDS Bgr_17670 NC_012846.1 2034983 2035534 R hypothetical membrane protein complement(2034983..2035534) Bartonella grahamii as4aup 7998731 YP_002972575.1 CDS Bgr_17680 NC_012846.1 2035544 2035960 R hypothetical membrane protein complement(2035544..2035960) Bartonella grahamii as4aup 7998732 YP_002972576.1 CDS Bgr_17690 NC_012846.1 2038282 2038863 D hypothetical protein 2038282..2038863 Bartonella grahamii as4aup 7998733 YP_002972577.1 CDS yopP1 NC_012846.1 2040354 2041334 D targeted effector protein YopP1 2040354..2041334 Bartonella grahamii as4aup 7998734 YP_002972578.1 CDS yopP2 NC_012846.1 2041709 2042638 D targeted effector protein YopP2 2041709..2042638 Bartonella grahamii as4aup 7998735 YP_002972579.1 CDS Bgr_17720 NC_012846.1 2043549 2044211 D phage related lysozyme 2043549..2044211 Bartonella grahamii as4aup 7998736 YP_002972580.1 CDS Bgr_17730 NC_012846.1 2044211 2044444 D hypothetical protein 2044211..2044444 Bartonella grahamii as4aup 7998737 YP_002972581.1 CDS Bgr_17740 NC_012846.1 2044368 2044580 D hypothetical protein 2044368..2044580 Bartonella grahamii as4aup 7998738 YP_002972582.1 CDS Bgr_17750 NC_012846.1 2044561 2044785 D hypothetical protein 2044561..2044785 Bartonella grahamii as4aup 7998739 YP_002972583.1 CDS groEL NC_012846.1 2046783 2048426 R 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL complement(2046783..2048426) Bartonella grahamii as4aup 7998740 YP_002972584.1 CDS groES NC_012846.1 2048485 2048781 R 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES complement(2048485..2048781) Bartonella grahamii as4aup 7998741 YP_002972585.1 CDS fumC NC_012846.1 2049008 2050396 D class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 2049008..2050396 Bartonella grahamii as4aup 7998742 YP_002972586.1 CDS hbpC2 NC_012846.1 2051857 2052747 D hemin binding protein C 2051857..2052747 Bartonella grahamii as4aup 7998745 YP_002972587.1 CDS Bgr_17840 NC_012846.1 2055170 2055775 D hypothetical membrane protein 2055170..2055775 Bartonella grahamii as4aup 7998748 YP_002972588.1 CDS Bgr_17850 NC_012846.1 2055788 2056360 D hypothetical disulfide bond formation protein B 2055788..2056360 Bartonella grahamii as4aup 7998749 YP_002972589.1 CDS Bgr_17860 NC_012846.1 2056642 2057166 D hypothetical protein 2056642..2057166 Bartonella grahamii as4aup 7998750 YP_002972590.1 CDS Bgr_17870 NC_012846.1 2058428 2058796 D hypothetical membrane protein 2058428..2058796 Bartonella grahamii as4aup 7998751 YP_002972591.1 CDS Bgr_17880 NC_012846.1 2059578 2060228 R hypothetical protein complement(2059578..2060228) Bartonella grahamii as4aup 7998752 YP_002972592.1 CDS Bgr_17890 NC_012846.1 2061301 2062110 D hypothetical membrane protein 2061301..2062110 Bartonella grahamii as4aup 7998753 YP_002972593.1 CDS dut NC_012846.1 2062356 2062886 D catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase 2062356..2062886 Bartonella grahamii as4aup 7998754 YP_002972594.1 CDS exbD NC_012846.1 2063711 2064292 R biopolymer transport protein ExbD complement(2063711..2064292) Bartonella grahamii as4aup 7998755 YP_002972595.1 CDS exbB NC_012846.1 2064289 2065173 R biopolymer transport protein ExbB complement(2064289..2065173) Bartonella grahamii as4aup 7998756 YP_002972596.1 CDS Bgr_17930 NC_012846.1 2066176 2066505 D hypothetical protein 2066176..2066505 Bartonella grahamii as4aup 7998757 YP_002972597.1 CDS Bgr_17940 NC_012846.1 2066509 2066952 D hypothetical membrane protein 2066509..2066952 Bartonella grahamii as4aup 7998758 YP_002972598.1 CDS Bgr_17960 NC_012846.1 2069157 2069900 R hypothetical protein complement(2069157..2069900) Bartonella grahamii as4aup 7998760 YP_002972599.1 CDS vblB2 NC_012846.1 2070059 2070409 D VblB2 protein 2070059..2070409 Bartonella grahamii as4aup 7998761 YP_002972600.1 CDS vblB3 NC_012846.1 2070437 2070760 D VblB3 protein 2070437..2070760 Bartonella grahamii as4aup 7998762 YP_002972601.1 CDS vblB4 NC_012846.1 2070760 2073120 D VblB4 protein 2070760..2073120 Bartonella grahamii as4aup 7998763 YP_002972602.1 CDS vblB5 NC_012846.1 2073117 2073890 D VblB5 protein 2073117..2073890 Bartonella grahamii as4aup 7998764 YP_002972603.1 CDS Bgr_18010 NC_012846.1 2073914 2074180 D hypothetical protein 2073914..2074180 Bartonella grahamii as4aup 7998765 YP_002972604.1 CDS Bgr_18020 NC_012846.1 2074180 2074563 D hypothetical protein 2074180..2074563 Bartonella grahamii as4aup 7998766 YP_002972605.1 CDS Bgr_18030 NC_012846.1 2074859 2075242 D hypothetical protein 2074859..2075242 Bartonella grahamii as4aup 7998767 YP_002972606.1 CDS Bgr_18040 NC_012846.1 2075537 2075917 D hypothetical protein 2075537..2075917 Bartonella grahamii as4aup 7998768 YP_002972607.1 CDS vblB6 NC_012846.1 2075964 2076902 D VblB6 protein 2075964..2076902 Bartonella grahamii as4aup 7998769 YP_002972608.1 CDS vblB7 NC_012846.1 2076909 2077193 D VblB7 protein 2076909..2077193 Bartonella grahamii as4aup 7998770 YP_002972609.1 CDS vblB8 NC_012846.1 2077190 2077861 D VblB8 protein 2077190..2077861 Bartonella grahamii as4aup 7998771 YP_002972610.1 CDS vblB9 NC_012846.1 2077864 2078718 D VblB9 protein 2077864..2078718 Bartonella grahamii as4aup 7998772 YP_002972611.1 CDS vblB10 NC_012846.1 2078746 2079930 D VblB10 protein 2078746..2079930 Bartonella grahamii as4aup 7998773 YP_002972612.1 CDS vblB11 NC_012846.1 2079940 2080992 D VblB11 protein 2079940..2080992 Bartonella grahamii as4aup 7998774 YP_002972613.1 CDS Bgr_18120 NC_012846.1 2082119 2083636 R cell filamentation protein Fic complement(2082119..2083636) Bartonella grahamii as4aup 7998776 YP_002972614.1 CDS Bgr_18130 NC_012846.1 2083623 2083811 R hypothetical protein complement(2083623..2083811) Bartonella grahamii as4aup 7998777 YP_002972615.1 CDS glmM NC_012846.1 2085159 2086532 R catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase complement(2085159..2086532) Bartonella grahamii as4aup 7998780 YP_002972616.1 CDS ftsH NC_012846.1 2087079 2089229 R cell division protein FtsH complement(2087079..2089229) Bartonella grahamii as4aup 7998781 YP_002972617.1 CDS Bgr_18180 NC_012846.1 2089344 2090831 R tRNA(Ile)-lysidine synthetase complement(2089344..2090831) Bartonella grahamii as4aup 7998782 YP_002972618.1 CDS Bgr_18190 NC_012846.1 2090850 2093144 R Tol-Pal system protein YbgF complement(2090850..2093144) Bartonella grahamii as4aup 7998783 YP_002972619.1 CDS pal NC_012846.1 2093197 2093718 R peptidoglycan-associated lipoprotein complement(2093197..2093718) Bartonella grahamii as4aup 7998784 YP_002972620.1 CDS Bgr_18210 NC_012846.1 2093921 2094616 R hypothetical protein complement(2093921..2094616) Bartonella grahamii as4aup 7998785 YP_002972621.1 CDS Bgr_18220 NC_012846.1 2094983 2095729 D hypothetical protein 2094983..2095729 Bartonella grahamii as4aup 7998786 YP_002972622.1 CDS tolB NC_012846.1 2096830 2098155 R forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB complement(2096830..2098155) Bartonella grahamii as4aup 7998787 YP_002972623.1 CDS tolA NC_012846.1 2098199 2099695 R TolA protein complement(2098199..2099695) Bartonella grahamii as4aup 7998788 YP_002972624.1 CDS tolR NC_012846.1 2099804 2100259 R TolR protein complement(2099804..2100259) Bartonella grahamii as4aup 7998789 YP_002972625.1 CDS tolQ NC_012846.1 2100275 2100988 R inner membrane TolQ protein complement(2100275..2100988) Bartonella grahamii as4aup 7998790 YP_002972626.1 CDS Bgr_18270 NC_012846.1 2102717 2103157 R 4-hydroxybenzoyl-CoA thioesterase complement(2102717..2103157) Bartonella grahamii as4aup 7998791 YP_002972627.1 CDS ruvB NC_012846.1 2103370 2104464 R promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB complement(2103370..2104464) Bartonella grahamii as4aup 7998792 YP_002972628.1 CDS ruvA NC_012846.1 2104478 2105092 R plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA complement(2104478..2105092) Bartonella grahamii as4aup 7998793 YP_002972629.1 CDS ruvC NC_012846.1 2105106 2105621 R endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase complement(2105106..2105621) Bartonella grahamii as4aup 7998794 YP_002972630.1 CDS Bgr_18320 NC_012846.1 2107179 2107697 R hypothetical protein complement(2107179..2107697) Bartonella grahamii as4aup 7998796 YP_002972631.1 CDS opgC NC_012846.1 2107880 2109022 R putative transmembrane protein OpgC complement(2107880..2109022) Bartonella grahamii as4aup 7998797 YP_002972632.1 CDS thiE2 NC_012846.1 2109389 2110051 D catalyzes the formation of thiamine monophosphate from 2-methyl-4-amino-5-hydroxymethylpyrimidine diphosphate and 4-methyl-5-(2-phosphono-oxyethyl)-thiazole; thiamine-phosphate pyrophosphorylase 2109389..2110051 Bartonella grahamii as4aup 7998798 YP_002972633.1 CDS Bgr_18350 NC_012846.1 2110362 2111138 D hypothetical protein 2110362..2111138 Bartonella grahamii as4aup 7998799 YP_002972634.1 CDS Bgr_18360 NC_012846.1 2111707 2112072 D transcriptional regulator 2111707..2112072 Bartonella grahamii as4aup 7998800 YP_002972635.1 CDS Bgr_18370 NC_012846.1 2112451 2112801 D transcriptional regulator 2112451..2112801 Bartonella grahamii as4aup 7998801 YP_002972636.1 CDS Bgr_18380 NC_012846.1 2113196 2113561 D transcriptional regulator 2113196..2113561 Bartonella grahamii as4aup 7998802 YP_002972637.1 CDS Bgr_18390 NC_012846.1 2113905 2114948 D hypothetical protein 2113905..2114948 Bartonella grahamii as4aup 7998803 YP_002972638.1 CDS efp NC_012846.1 2116517 2117092 D Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 2116517..2117092 Bartonella grahamii as4aup 7998805 YP_002972639.1 CDS suhB NC_012846.1 2117104 2117895 D extragenic suppressor protein SuhB 2117104..2117895 Bartonella grahamii as4aup 7998806 YP_002972640.1 CDS Bgr_18450 NC_012846.1 2120955 2122745 R ABC transporter ATP-binding protein complement(2120955..2122745) Bartonella grahamii as4aup 7998809 YP_002972641.1 CDS rpmE NC_012846.1 2122933 2123154 D RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 2122933..2123154 Bartonella grahamii as4aup 7998810 YP_002972642.1 CDS Bgr_18480 NC_012846.1 2123864 2124115 D ABC transporter ATP-binding protein 2123864..2124115 Bartonella grahamii as4aup 7998812 YP_002972643.1 CDS fbaB NC_012846.1 2127190 2128221 R fructose-bisphosphate aldolase complement(2127190..2128221) Bartonella grahamii as4aup 7998814 YP_002972644.1 CDS pgk NC_012846.1 2128352 2129545 R Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase complement(2128352..2129545) Bartonella grahamii as4aup 7998815 YP_002972645.1 CDS gap NC_012846.1 2130060 2131067 R glyceraldehyde 3-phosphate dehydrogenase complement(2130060..2131067) Bartonella grahamii as4aup 7998816 YP_002972646.1 CDS tktA NC_012846.1 2131248 2133254 R catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase complement(2131248..2133254) Bartonella grahamii as4aup 7998817 YP_002972647.1 CDS Bgr_18540 NC_012846.1 2133589 2133864 D hypothetical protein 2133589..2133864 Bartonella grahamii as4aup 7998818 YP_002972648.1 CDS Bgr_18550 NC_012846.1 2133877 2134260 D hypothetical protein 2133877..2134260 Bartonella grahamii as4aup 7998819 YP_002972649.1 CDS pykA NC_012846.1 2135735 2137171 R catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase complement(2135735..2137171) Bartonella grahamii as4aup 7998820 YP_002972650.1 CDS Bgr_18570 NC_012846.1 2137168 2137596 R hypothetical protein complement(2137168..2137596) Bartonella grahamii as4aup 7998821 YP_002972651.1 CDS Bgr_18580 NC_012846.1 2137920 2138180 D hypothetical protein 2137920..2138180 Bartonella grahamii as4aup 7998822 YP_002972652.1 CDS rimJ NC_012846.1 2138716 2139282 R ribosomal-protein-alanine acetyltransferase complement(2138716..2139282) Bartonella grahamii as4aup 7998823 YP_002972653.1 CDS Bgr_18610 NC_012846.1 2139836 2141698 R ABC transporter ATP-binding protein complement(2139836..2141698) Bartonella grahamii as4aup 7998825 YP_002972654.1 CDS Bgr_18620 NC_012846.1 2141698 2142084 R hypothetical membrane protein complement(2141698..2142084) Bartonella grahamii as4aup 7998826 YP_002972655.1 CDS Bgr_18630 NC_012846.1 2142188 2142823 R thiamine pyrophosphokinase complement(2142188..2142823) Bartonella grahamii as4aup 7998827 YP_002972656.1 CDS Bgr_18640 NC_012846.1 2142971 2144548 D peptidase, M48 family 2142971..2144548 Bartonella grahamii as4aup 7998828 YP_002972657.1 CDS rpoH2 NC_012846.1 2144865 2145776 R binds with the catalytic core of RNA polymerase to produce the holoenzyme; sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma-32 is responsible for the expression of heat shock promoters; there are paralogs in Rhizobium and Sinorhizobium; the proteins in this cluster act as secondary heat shock sigma factors; the Rhizobium sigma-32 factor may also be involved in exopolysaccharide production; RNA polymerase factor sigma-32 complement(2144865..2145776) Bartonella grahamii as4aup 7998829 YP_002972658.1 CDS Bgr_18660 NC_012846.1 2146350 2147936 D ATP-dependent helicase (fragment) 2146350..2147936 Bartonella grahamii as4aup 7998830 YP_002972659.1 CDS fdxA NC_012846.1 2147958 2148299 D ferredoxin II 2147958..2148299 Bartonella grahamii as4aup 7998831 YP_002972660.1 CDS Bgr_18680 NC_012846.1 2148604 2149188 D transcriptional regulator, CarD family 2148604..2149188 Bartonella grahamii as4aup 7998832 YP_002972661.1 CDS rpmF NC_012846.1 2151497 2151676 R some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 complement(2151497..2151676) Bartonella grahamii as4aup 7998835 YP_002972662.1 CDS ispA NC_012846.1 2152103 2153005 D geranyltranstransferase 2152103..2153005 Bartonella grahamii as4aup 7998836 YP_002972663.1 CDS Bgr_18760 NC_012846.1 2155780 2156931 R putative permease of the major facilitator superfamily complement(2155780..2156931) Bartonella grahamii as4aup 7998839 YP_002972664.1 CDS ispG NC_012846.1 2157272 2158513 R catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase complement(2157272..2158513) Bartonella grahamii as4aup 7998840 YP_002972665.1 CDS Bgr_18780 NC_012846.1 2159367 2159651 D hypothetical protein 2159367..2159651 Bartonella grahamii as4aup 7998841 YP_002972666.1 CDS Bgr_18790 NC_012846.1 2160129 2161136 R secretion protein, HlyD family complement(2160129..2161136) Bartonella grahamii as4aup 7998842 YP_002972667.1 CDS Bgr_18800 NC_012846.1 2161166 2162794 R transport protein transmembrane complement(2161166..2162794) Bartonella grahamii as4aup 7998843 YP_002972668.1 CDS atpC NC_012846.1 2162819 2163235 R ATP synthase epsilon chain complement(2162819..2163235) Bartonella grahamii as4aup 7998844 YP_002972669.1 CDS atpD NC_012846.1 2163341 2164969 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta complement(2163341..2164969) Bartonella grahamii as4aup 7998845 YP_002972670.1 CDS atpG NC_012846.1 2164989 2165900 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma complement(2164989..2165900) Bartonella grahamii as4aup 7998846 YP_002972671.1 CDS atpA NC_012846.1 2165921 2167456 R produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha complement(2165921..2167456) Bartonella grahamii as4aup 7998847 YP_002972672.1 CDS atpH NC_012846.1 2167456 2168040 R ATP synthase delta chain complement(2167456..2168040) Bartonella grahamii as4aup 7998848 YP_002972673.1 CDS priA NC_012846.1 2170022 2172229 R binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA complement(2170022..2172229) Bartonella grahamii as4aup 7998850 YP_002972674.1 CDS talC NC_012846.1 2173368 2174021 D similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity; putative translaldolase 2173368..2174021 Bartonella grahamii as4aup 7998851 YP_002972675.1 CDS Bgr_18890 NC_012846.1 2174018 2174614 R hypothetical protein complement(2174018..2174614) Bartonella grahamii as4aup 7998852 YP_002972676.1 CDS leuS NC_012846.1 2174601 2177261 R leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase complement(2174601..2177261) Bartonella grahamii as4aup 7998853 YP_002972677.1 CDS Bgr_18910 NC_012846.1 2177427 2178116 D hypothetical protein 2177427..2178116 Bartonella grahamii as4aup 7998854 YP_002972678.1 CDS acs NC_012846.1 2181254 2183197 D Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase 2181254..2183197 Bartonella grahamii as4aup 7998855 YP_002972679.1 CDS ftsE NC_012846.1 2183754 2184413 D cell division ATP-binding protein FtsE 2183754..2184413 Bartonella grahamii as4aup 7998856 YP_002972680.1 CDS ftsX NC_012846.1 2184406 2185359 D cell division protein 2184406..2185359 Bartonella grahamii as4aup 7998857 YP_002972681.1 CDS Bgr_18950 NC_012846.1 2185346 2186035 D hypothetical membrane protein 2185346..2186035 Bartonella grahamii as4aup 7998858 YP_002972682.1 CDS Bgr_18960 NC_012846.1 2187395 2192353 R helicase/methyltransferase complement(2187395..2192353) Bartonella grahamii as4aup 7998859 YP_002972683.1 CDS Bgr_18970 NC_012846.1 2193308 2195317 R ABC transporter ATP-binding protein complement(2193308..2195317) Bartonella grahamii as4aup 7998860 YP_002972684.1 CDS Bgr_18980 NC_012846.1 2195321 2196547 R secretion protein, HlyD family complement(2195321..2196547) Bartonella grahamii as4aup 7998861 YP_002972685.1 CDS Bgr_18990 NC_012846.1 2196544 2198025 R putative outer membrane efflux protein complement(2196544..2198025) Bartonella grahamii as4aup 7998862 YP_002972686.1 CDS xthA2 NC_012846.1 2198093 2198902 R exodeoxyribonuclease III complement(2198093..2198902) Bartonella grahamii as4aup 7998863 YP_002972687.1 CDS Bgr_19010 NC_012846.1 2198933 2199541 R outer membrane lipoprotein carrier protein, LolA family complement(2198933..2199541) Bartonella grahamii as4aup 7998864 YP_002972688.1 CDS ftsK2 NC_012846.1 2200643 2203084 R cell division protein FtsK complement(2200643..2203084) Bartonella grahamii as4aup 7998866 YP_002972689.1 CDS Bgr_19040 NC_012846.1 2203808 2205085 D 2-octaprenyl-6-methoxyphenyl hydroxylase 2203808..2205085 Bartonella grahamii as4aup 7998867 YP_002972690.1 CDS korB NC_012846.1 2206612 2206899 R KorB protein complement(2206612..2206899) Bartonella grahamii as4aup 7998868 YP_002972691.1 CDS Bgr_19060 NC_012846.1 2207028 2207642 D hypothetical membrane protein 2207028..2207642 Bartonella grahamii as4aup 7998869 YP_002972692.1 CDS trwN NC_012846.1 2207642 2208274 D TrwN protein 2207642..2208274 Bartonella grahamii as4aup 7998870 YP_002972693.1 CDS korA NC_012846.1 2208399 2208698 D KorA protein 2208399..2208698 Bartonella grahamii as4aup 7998871 YP_002972694.1 CDS trwL1 NC_012846.1 2208661 2208984 D TrwL1 protein 2208661..2208984 Bartonella grahamii as4aup 7998872 YP_002972695.1 CDS trwL2 NC_012846.1 2209125 2209439 D TrwL2 protein 2209125..2209439 Bartonella grahamii as4aup 7998873 YP_002972696.1 CDS trwL3 NC_012846.1 2209518 2209835 D TrwL3 protein 2209518..2209835 Bartonella grahamii as4aup 7998874 YP_002972697.1 CDS trwL4 NC_012846.1 2209960 2210280 D TrwL4 protein 2209960..2210280 Bartonella grahamii as4aup 7998875 YP_002972698.1 CDS trwL5 NC_012846.1 2210289 2210657 D TrwL5 protein 2210289..2210657 Bartonella grahamii as4aup 7998876 YP_002972699.1 CDS trwL6 NC_012846.1 2210783 2211094 D TrwL6 protein 2210783..2211094 Bartonella grahamii as4aup 7998877 YP_002972700.1 CDS trwL7 NC_012846.1 2211209 2211529 D TrwL7 protein 2211209..2211529 Bartonella grahamii as4aup 7998878 YP_002972701.1 CDS trwL8 NC_012846.1 2211655 2211963 D TrwL8 protein 2211655..2211963 Bartonella grahamii as4aup 7998879 YP_002972702.1 CDS trwM NC_012846.1 2211976 2212284 D TrwM protein 2211976..2212284 Bartonella grahamii as4aup 7998880 YP_002972703.1 CDS trwK NC_012846.1 2212287 2214758 D TrwK protein 2212287..2214758 Bartonella grahamii as4aup 7998881 YP_002972704.1 CDS trwJ1 NC_012846.1 2214755 2215513 D TrwJ1 protein 2214755..2215513 Bartonella grahamii as4aup 7998882 YP_002972705.1 CDS trwI1 NC_012846.1 2215703 2216548 D TrwI1 protein 2215703..2216548 Bartonella grahamii as4aup 7998883 YP_002972706.1 CDS trwH1 NC_012846.1 2216787 2216930 D TrwH1 protein 2216787..2216930 Bartonella grahamii as4aup 7998884 YP_002972707.1 CDS trwJ2 NC_012846.1 2216927 2217670 D TrwJ2 protein 2216927..2217670 Bartonella grahamii as4aup 7998885 YP_002972708.1 CDS trwI2 NC_012846.1 2217885 2218730 D TrwI2 protein 2217885..2218730 Bartonella grahamii as4aup 7998886 YP_002972709.1 CDS trwH2 NC_012846.1 2218973 2219116 D TrwH2 protein 2218973..2219116 Bartonella grahamii as4aup 7998887 YP_002972710.1 CDS trwJ3 NC_012846.1 2219113 2219838 D TrwJ3 protein 2219113..2219838 Bartonella grahamii as4aup 7998888 YP_002972711.1 CDS trwI3 NC_012846.1 2220022 2220867 D TrwI3 protein 2220022..2220867 Bartonella grahamii as4aup 7998889 YP_002972712.1 CDS trwH3 NC_012846.1 2221110 2221262 D TrwH3 protein 2221110..2221262 Bartonella grahamii as4aup 7998890 YP_002972713.1 CDS trwJ4 NC_012846.1 2221351 2222295 D TrwJ4 protein 2221351..2222295 Bartonella grahamii as4aup 7998891 YP_002972714.1 CDS trwI4 NC_012846.1 2222479 2223324 D TrwI4 protein 2222479..2223324 Bartonella grahamii as4aup 7998892 YP_002972715.1 CDS trwH4 NC_012846.1 2223567 2223710 D TrwH4 protein 2223567..2223710 Bartonella grahamii as4aup 7998893 YP_002972716.1 CDS trwG NC_012846.1 2223707 2224408 D TrwG protein 2223707..2224408 Bartonella grahamii as4aup 7998894 YP_002972717.1 CDS trwF NC_012846.1 2224401 2225228 D TrwF protein 2224401..2225228 Bartonella grahamii as4aup 7998895 YP_002972718.1 CDS trwE NC_012846.1 2225228 2226385 D TrwE protein 2225228..2226385 Bartonella grahamii as4aup 7998896 YP_002972719.1 CDS trwD NC_012846.1 2226360 2227421 D TrwD protein 2226360..2227421 Bartonella grahamii as4aup 7998897 YP_002972720.1 CDS sdhB NC_012846.1 2230562 2231341 R part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit complement(2230562..2231341) Bartonella grahamii as4aup 7998899 YP_002972721.1 CDS sdhA NC_012846.1 2231357 2233201 R part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit complement(2231357..2233201) Bartonella grahamii as4aup 7998900 YP_002972722.1 CDS sdhD NC_012846.1 2233208 2233594 R succinate dehydrogenase hydrophobic membrane anchor protein complement(2233208..2233594) Bartonella grahamii as4aup 7998901 YP_002972723.1 CDS sdhC NC_012846.1 2233613 2234014 R succinate dehydrogenase cytochrome b560 subunit complement(2233613..2234014) Bartonella grahamii as4aup 7998902 YP_002972724.1 CDS rplS NC_012846.1 2234489 2234929 R this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 complement(2234489..2234929) Bartonella grahamii as4aup 7998903 YP_002972725.1 CDS trmD NC_012846.1 2235140 2235838 R methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase complement(2235140..2235838) Bartonella grahamii as4aup 7998904 YP_002972726.1 CDS rimM NC_012846.1 2236122 2236679 R Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM complement(2236122..2236679) Bartonella grahamii as4aup 7998905 YP_002972727.1 CDS Bgr_19430 NC_012846.1 2236812 2237633 D SapC-related protein 2236812..2237633 Bartonella grahamii as4aup 7998906 YP_002972728.1 CDS xerC NC_012846.1 2237637 2238605 D site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC 2237637..2238605 Bartonella grahamii as4aup 7998907 YP_002972729.1 CDS bolA NC_012846.1 2238626 2238898 R transcriptional regulator BolA complement(2238626..2238898) Bartonella grahamii as4aup 7998908 YP_002972730.1 CDS dnaJ2 NC_012846.1 2239023 2239643 D heat shock protein DnaJ 2239023..2239643 Bartonella grahamii as4aup 7998909 YP_002972731.1 CDS cobS NC_012846.1 2239845 2240825 D cobalamin biosynthesis protein CobS 2239845..2240825 Bartonella grahamii as4aup 7998910 YP_002972732.1 CDS cobT2 NC_012846.1 2240840 2242735 D cobalamin biosynthesis protein CobT2 2240840..2242735 Bartonella grahamii as4aup 7998911 YP_002972733.1 CDS Bgr_19520 NC_012846.1 2245100 2245783 R hypothetical protein complement(2245100..2245783) Bartonella grahamii as4aup 7998915 YP_002972734.1 CDS rpmB NC_012846.1 2245902 2246219 R required for 70S ribosome assembly; 50S ribosomal protein L28 complement(2245902..2246219) Bartonella grahamii as4aup 7998916 YP_002972735.1 CDS surF NC_012846.1 2246516 2247298 D SurF1 family protein (surfeit 1) 2246516..2247298 Bartonella grahamii as4aup 7998917 YP_002972736.1 CDS purH NC_012846.1 2248019 2249638 D involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 2248019..2249638 Bartonella grahamii as4aup 7998919 YP_002972737.1 CDS Bgr_19570 NC_012846.1 2249988 2250140 D hypothetical protein 2249988..2250140 Bartonella grahamii as4aup 7998920 YP_002972738.1 CDS Bgr_19580 NC_012846.1 2251056 2252801 R hypothetical protein complement(2251056..2252801) Bartonella grahamii as4aup 7998921 YP_002972739.1 CDS sun2 NC_012846.1 2252866 2254230 R SUN-family protein complement(2252866..2254230) Bartonella grahamii as4aup 7998922 YP_002972740.1 CDS htpX NC_012846.1 2254278 2255324 R putative metalloprotease; heat shock protein HtpX complement(2254278..2255324) Bartonella grahamii as4aup 7998923 YP_002972741.1 CDS Bgr_19610 NC_012846.1 2255408 2255623 D hypothetical protein 2255408..2255623 Bartonella grahamii as4aup 7998924 YP_002972742.1 CDS rpsP NC_012846.1 2255760 2256134 R binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 complement(2255760..2256134) Bartonella grahamii as4aup 7998925 YP_002972743.1 CDS tyrA NC_012846.1 2256151 2256483 R catalyzes the interconversion of chorismate to prephenate; chorismate mutase complement(2256151..2256483) Bartonella grahamii as4aup 7998926 YP_002972744.1 CDS ffh NC_012846.1 2256505 2258073 R signal recognition particle protein complement(2256505..2258073) Bartonella grahamii as4aup 7998927 YP_002972745.1 CDS cynT NC_012846.1 2258304 2258960 R carbonic anhydrase protein complement(2258304..2258960) Bartonella grahamii as4aup 7998928 YP_002972746.1 CDS Bgr_19660 NC_012846.1 2259234 2263943 D NAD glutamate dehydrogenase 2259234..2263943 Bartonella grahamii as4aup 7998929 YP_002972747.1 CDS Bgr_19670 NC_012846.1 2264994 2266049 R hypothetical protein complement(2264994..2266049) Bartonella grahamii as4aup 7998930 YP_002972748.1 CDS guA NC_012846.1 2266472 2267218 R Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group; glutamine amidotransferase complement(2266472..2267218) Bartonella grahamii as4aup 7998931 YP_002972749.1 CDS Bgr_19690 NC_012846.1 2267364 2268923 R hypothetical DNA-binding protein complement(2267364..2268923) Bartonella grahamii as4aup 7998932 YP_002972750.1 CDS Bgr_19700 NC_012846.1 2268935 2270119 R hypothetical membrane protein complement(2268935..2270119) Bartonella grahamii as4aup 7998933 YP_002972751.1 CDS gcp NC_012846.1 2270505 2271599 D in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; putative DNA-binding/iron metalloprotein/AP endonuclease 2270505..2271599 Bartonella grahamii as4aup 7998934 YP_002972752.1 CDS Bgr_19720 NC_012846.1 2272210 2272644 D hypothetical protein 2272210..2272644 Bartonella grahamii as4aup 7998935 YP_002972753.1 CDS Bgr_19730 NC_012846.1 2273430 2274110 D two-component response regulator 2273430..2274110 Bartonella grahamii as4aup 7998936 YP_002972754.1 CDS Bgr_19740 NC_012846.1 2274255 2275025 R putative methyltransferase complement(2274255..2275025) Bartonella grahamii as4aup 7998937 YP_002972755.1 CDS Bgr_19750 NC_012846.1 2275248 2277677 R hypothetical membrane protein complement(2275248..2277677) Bartonella grahamii as4aup 7998938 YP_002972756.1 CDS lysA NC_012846.1 2277794 2279068 R diaminopimelate decarboxylase complement(2277794..2279068) Bartonella grahamii as4aup 7998939 YP_002972757.1 CDS Bgr_19770 NC_012846.1 2279078 2279257 R hypothetical protein complement(2279078..2279257) Bartonella grahamii as4aup 7998940 YP_002972758.1 CDS argH NC_012846.1 2279309 2280709 R catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase complement(2279309..2280709) Bartonella grahamii as4aup 7998941 YP_002972759.1 CDS tplA NC_012846.1 2280742 2281437 D thiol:disulfide interchange protein 2280742..2281437 Bartonella grahamii as4aup 7998942 YP_002972760.1 CDS Bgr_19800 NC_012846.1 2281440 2281916 R hypothetical protein complement(2281440..2281916) Bartonella grahamii as4aup 7998943 YP_002972761.1 CDS Bgr_19810 NC_012846.1 2281938 2282804 R ribonuclease RNAse BN transmembrane protein complement(2281938..2282804) Bartonella grahamii as4aup 7998944 YP_002972762.1 CDS tyrC NC_012846.1 2283216 2284145 R dual function enzyme catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate and the formation of tyrosine from arogenate; cyclohexadienyl dehydrogenase complement(2283216..2284145) Bartonella grahamii as4aup 7998945 YP_002972763.1 CDS holA NC_012846.1 2286078 2287118 R required for the assembly and function of the DNAX complex which are required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta complement(2286078..2287118) Bartonella grahamii as4aup 7998946 YP_002972764.1 CDS Bgr_19840 NC_012846.1 2287123 2287917 R ABC transporter ATP-binding protein complement(2287123..2287917) Bartonella grahamii as4aup 7998947 YP_002972765.1 CDS Bgr_19850 NC_012846.1 2287910 2288806 R ABC transporter permease complement(2287910..2288806) Bartonella grahamii as4aup 7998948 YP_002972766.1 CDS Bgr_19860 NC_012846.1 2288865 2289842 R ABC transporter substrate-binding protein complement(2288865..2289842) Bartonella grahamii as4aup 7998949 YP_002972767.1 CDS thiD2 NC_012846.1 2292698 2293552 R phosphomethylpyrimidine kinase ThiD2 complement(2292698..2293552) Bartonella grahamii as4aup 7998953 YP_002972768.1 CDS plsC NC_012846.1 2293682 2294479 D 1-acyl-sn-glycerol-3-phosphate acyltransferase 2293682..2294479 Bartonella grahamii as4aup 7998954 YP_002972769.1 CDS dacA3 NC_012846.1 2295186 2296277 D penicillin-binding protein 2295186..2296277 Bartonella grahamii as4aup 7998955 YP_002972770.1 CDS Bgr_19930 NC_012846.1 2296694 2297755 D cobalamin synthesis protein, P47K family 2296694..2297755 Bartonella grahamii as4aup 7998956 YP_002972771.1 CDS Bgr_19940 NC_012846.1 2299282 2300031 R putative lipoprotein complement(2299282..2300031) Bartonella grahamii as4aup 7998957 YP_002972772.1 CDS accA NC_012846.1 2300072 2301028 R catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha complement(2300072..2301028) Bartonella grahamii as4aup 7998958 YP_002972773.1 CDS xerD NC_012846.1 2301107 2302045 R integrase /recombinase xerD complement(2301107..2302045) Bartonella grahamii as4aup 7998959 YP_002972774.1 CDS aroK NC_012846.1 2302306 2302938 D catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase 2302306..2302938 Bartonella grahamii as4aup 7998960 YP_002972775.1 CDS aroB NC_012846.1 2302913 2304046 D catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 2302913..2304046 Bartonella grahamii as4aup 7998961 YP_002972776.1 CDS Bgr_19990 NC_012846.1 2304463 2304858 D hypothetical protein 2304463..2304858 Bartonella grahamii as4aup 7998962 YP_002972777.1 CDS Bgr_20000 NC_012846.1 2304876 2305265 D hypothetical protein 2304876..2305265 Bartonella grahamii as4aup 7998963 YP_002972778.1 CDS phaG NC_012846.1 2305282 2305692 R subunit G of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; putative monovalent cation/H+ antiporter subunit G complement(2305282..2305692) Bartonella grahamii as4aup 7998964 YP_002972779.1 CDS phaF NC_012846.1 2305689 2305970 R subunit F of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; putative monovalent cation/H+ antiporter subunit F complement(2305689..2305970) Bartonella grahamii as4aup 7998965 YP_002972780.1 CDS phaE NC_012846.1 2305967 2306452 R subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; putative monovalent cation/H+ antiporter subunit E complement(2305967..2306452) Bartonella grahamii as4aup 7998966 YP_002972781.1 CDS phaD NC_012846.1 2306449 2308071 R subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; putative monovalent cation/H+ antiporter subunit D complement(2306449..2308071) Bartonella grahamii as4aup 7998967 YP_002972782.1 CDS phaC NC_012846.1 2308071 2308412 R subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; putative monovalent cation/H+ antiporter subunit C complement(2308071..2308412) Bartonella grahamii as4aup 7998968 YP_002972783.1 CDS phaA NC_012846.1 2308412 2311333 R subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+; putative monovalent cation/H+ antiporter subunit A complement(2308412..2311333) Bartonella grahamii as4aup 7998969 YP_002972784.1 CDS Bgr_20070 NC_012846.1 2311566 2312063 R hypothetical protein complement(2311566..2312063) Bartonella grahamii as4aup 7998970 YP_002972785.1 CDS nspC NC_012846.1 2312231 2313328 D carboxynorspermidine decarboxylase 2312231..2313328 Bartonella grahamii as4aup 7998971 YP_002972786.1 CDS Bgr_20090 NC_012846.1 2313382 2314620 D saccharopine dehydrogenase 2313382..2314620 Bartonella grahamii as4aup 7998972 YP_002972787.1 CDS pdhD2 NC_012846.1 2315780 2317186 R Catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase complement(2315780..2317186) Bartonella grahamii as4aup 7998973 YP_002972788.1 CDS sucB NC_012846.1 2317218 2318429 R component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA; dihydrolipoamide succinyltransferase complement(2317218..2318429) Bartonella grahamii as4aup 7998974 YP_002972789.1 CDS sucA NC_012846.1 2318462 2321461 R SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component complement(2318462..2321461) Bartonella grahamii as4aup 7998975 YP_002972790.1 CDS sucD NC_012846.1 2321626 2322528 R Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha complement(2321626..2322528) Bartonella grahamii as4aup 7998976 YP_002972791.1 CDS sucC NC_012846.1 2322532 2323728 R catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta complement(2322532..2323728) Bartonella grahamii as4aup 7998977 YP_002972792.1 CDS mdh NC_012846.1 2323819 2324781 R Catalyzes the reversible oxidation of malate to oxaloacetate; malate dehydrogenase complement(2323819..2324781) Bartonella grahamii as4aup 7998978 YP_002972793.1 CDS Bgr_20160 NC_012846.1 2325070 2326269 R putative ATP-binding protein complement(2325070..2326269) Bartonella grahamii as4aup 7998979 YP_002972794.1 CDS omp19 NC_012846.1 2326367 2326912 R outer membrane lipoprotein Omp19 complement(2326367..2326912) Bartonella grahamii as4aup 7998980 YP_002972795.1 CDS dapF NC_012846.1 2327139 2327990 D involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 2327139..2327990 Bartonella grahamii as4aup 7998981 YP_002972796.1 CDS Bgr_20190 NC_012846.1 2327990 2329273 D tRNA modification enzyme, MiaB family 2327990..2329273 Bartonella grahamii as4aup 7998982 YP_002972797.1 CDS ftsY NC_012846.1 2329288 2330541 D cell division protein FtsY 2329288..2330541 Bartonella grahamii as4aup 7998983 YP_002972798.1 CDS ispZ NC_012846.1 2330538 2331224 D Involved in cell division; probably involved in intracellular septation; intracellular septation protein A 2330538..2331224 Bartonella grahamii as4aup 7998984 YP_002972799.1 CDS gloB NC_012846.1 2331287 2332048 D hydroxyacylglutathione hydrolase 2331287..2332048 Bartonella grahamii as4aup 7998985 YP_002972800.1 CDS Bgr_20230 NC_012846.1 2332051 2332548 D hypothetical protein 2332051..2332548 Bartonella grahamii as4aup 7998986 YP_002972801.1 CDS Bgr_20240 NC_012846.1 2332744 2333256 D hypothetical protein 2332744..2333256 Bartonella grahamii as4aup 7998987 YP_002972802.1 CDS parB NC_012846.1 2333806 2334711 R chromosome partitioning protein ParB complement(2333806..2334711) Bartonella grahamii as4aup 7998989 YP_002972803.1 CDS parA2 NC_012846.1 2334744 2335541 R chromosome partitioning protein ParA2 complement(2334744..2335541) Bartonella grahamii as4aup 7998990 YP_002972804.1 CDS gidB NC_012846.1 2335548 2336195 R glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB complement(2335548..2336195) Bartonella grahamii as4aup 7998991 YP_002972805.1 CDS gidA2 NC_012846.1 2336195 2338063 R GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA complement(2336195..2338063) Bartonella grahamii as4aup 7998992 YP_002972806.1 CDS trmE NC_012846.1 2338170 2339477 R in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE complement(2338170..2339477) Bartonella grahamii as4aup 7998993 YP_002972807.1 CDS rho NC_012846.1 2339509 2340774 R An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho complement(2339509..2340774) Bartonella grahamii as4aup 7998994 YP_002972808.1 CDS Bgr_p00010 NC_012847.1 226 477 D putative transcriptional regulator 226..477 Bartonella grahamii as4aup 7999031 YP_002972809.1 CDS Bgr_p00020 NC_012847.1 474 872 D hypothetical protein 474..872 Bartonella grahamii as4aup 7999001 YP_002972810.1 CDS resP NC_012847.1 1094 1747 R resolvase complement(1094..1747) Bartonella grahamii as4aup 7999002 YP_002972811.1 CDS Bgr_p00040 NC_012847.1 1920 2375 R putative nucleotide-binding protein complement(1920..2375) Bartonella grahamii as4aup 7999003 YP_002972812.1 CDS repC NC_012847.1 3073 4410 R replication protein C complement(3073..4410) Bartonella grahamii as4aup 7999004 YP_002972813.1 CDS vblB2 NC_012847.1 5269 5619 D VblB2 protein 5269..5619 Bartonella grahamii as4aup 7999005 YP_002972814.1 CDS vblB3 NC_012847.1 5638 5961 D VblB3 protein 5638..5961 Bartonella grahamii as4aup 7999006 YP_002972815.1 CDS vblB4 NC_012847.1 5961 8321 D VblB4 protein 5961..8321 Bartonella grahamii as4aup 7999007 YP_002972816.1 CDS vblB5 NC_012847.1 8318 9073 D VblB5 protein 8318..9073 Bartonella grahamii as4aup 7999008 YP_002972817.1 CDS Bgr_p00100 NC_012847.1 9095 9430 D hypothetical protein 9095..9430 Bartonella grahamii as4aup 7999009 YP_002972818.1 CDS vblB6 NC_012847.1 9491 10420 D VblB6 protein 9491..10420 Bartonella grahamii as4aup 7999010 YP_002972819.1 CDS vblB7 NC_012847.1 10429 10716 D VblB7 protein 10429..10716 Bartonella grahamii as4aup 7999011 YP_002972820.1 CDS vblB8 NC_012847.1 10713 11384 D VblB8 protein 10713..11384 Bartonella grahamii as4aup 7999012 YP_002972821.1 CDS vblB9 NC_012847.1 11387 12241 D VblB9 protein 11387..12241 Bartonella grahamii as4aup 7999013 YP_002972822.1 CDS vblB10 NC_012847.1 12269 13384 D VblB10 protein 12269..13384 Bartonella grahamii as4aup 7999014 YP_002972823.1 CDS vblB11 NC_012847.1 13402 14454 D VblB11 protein 13402..14454 Bartonella grahamii as4aup 7999015 YP_002972824.1 CDS dinJ NC_012847.1 14509 14727 R damage-inducible protein J complement(14509..14727) Bartonella grahamii as4aup 7999016 YP_002972825.1 CDS Bgr_p00180 NC_012847.1 14806 16332 R cell filamentation protein Fic complement(14806..16332) Bartonella grahamii as4aup 7999017 YP_002972826.1 CDS Bgr_p00190 NC_012847.1 16319 16507 R hypothetical protein complement(16319..16507) Bartonella grahamii as4aup 7999018 YP_002972827.1 CDS traA NC_012847.1 16578 20288 R conjugal transfer protein TraA complement(16578..20288) Bartonella grahamii as4aup 7999019 YP_002972828.1 CDS Bgr_p00210 NC_012847.1 20498 20728 D putative TraC protein 20498..20728 Bartonella grahamii as4aup 7999020 YP_002972829.1 CDS traD NC_012847.1 20781 21005 D conjugal transfer protein TraD 20781..21005 Bartonella grahamii as4aup 7999021 YP_002972830.1 CDS traG NC_012847.1 20983 22896 D VirD4 family; conjugal transfer coupling protein TraG 20983..22896 Bartonella grahamii as4aup 7999022 YP_002972831.1 CDS repA NC_012847.1 23322 23729 D replication protein RepA 23322..23729 Bartonella grahamii as4aup 7999023 YP_002972832.1 CDS Bgr_p00250 NC_012847.1 23964 24242 D plasmid maintenance system killer 23964..24242 Bartonella grahamii as4aup 7999024 YP_002972833.1 CDS Bgr_p00260 NC_012847.1 24260 24547 D plasmid maintenance system antidote protein 24260..24547 Bartonella grahamii as4aup 7999025 YP_002972834.1 CDS Bgr_p00270 NC_012847.1 24597 24992 R hypothetical membrane protein complement(24597..24992) Bartonella grahamii as4aup 7999026 YP_002972835.1 CDS Bgr_p00280 NC_012847.1 25171 25839 R phage related protein complement(25171..25839) Bartonella grahamii as4aup 7999027 YP_002972836.1 CDS Bgr_p00290 NC_012847.1 26691 27047 D transcriptional regulator 26691..27047 Bartonella grahamii as4aup 7999028 YP_002972837.1 CDS Bgr_p00300 NC_012847.1 27149 27466 R putative repressor complement(27149..27466) Bartonella grahamii as4aup 7999029 YP_002972838.1 CDS parA NC_012847.1 27463 28155 R partition protein ParA complement(27463..28155) Bartonella grahamii as4aup 7999030 Bgr_00760 tRNA trnA NC_012846.1 102378 102453 R tRNA-Ala complement(102378..102453) Bartonella grahamii as4aup 7997052 Bgr_01340 tRNA trnR NC_012846.1 174534 174610 R tRNA-Arg complement(174534..174610) Bartonella grahamii as4aup 7997110 Bgr_01380 tRNA trnS NC_012846.1 181427 181516 R tRNA-Ser complement(181427..181516) Bartonella grahamii as4aup 7997114 Bgr_01420 tRNA trnS NC_012846.1 186980 187069 D tRNA-Ser 186980..187069 Bartonella grahamii as4aup 7997118 Bgr_02950 tRNA trnT NC_012846.1 400662 400737 R tRNA-Thr complement(400662..400737) Bartonella grahamii as4aup 7997270 Bgr_03840 tRNA trnF NC_012846.1 465327 465402 R tRNA-Phe complement(465327..465402) Bartonella grahamii as4aup 7997358 Bgr_03970 tRNA trnH NC_012846.1 482899 482975 D tRNA-His 482899..482975 Bartonella grahamii as4aup 7997371 Bgr_04990 tRNA trnQ NC_012846.1 605898 605972 D tRNA-Gln 605898..605972 Bartonella grahamii as4aup 7997472 Bgr_06760 tRNA trnL NC_012846.1 821399 821481 D tRNA-Leu 821399..821481 Bartonella grahamii as4aup 7997648 Bgr_06830 tRNA trnY NC_012846.1 828426 828509 D tRNA-Tyr 828426..828509 Bartonella grahamii as4aup 7997655 Bgr_06840 tRNA trnG NC_012846.1 828542 828615 D tRNA-Gly 828542..828615 Bartonella grahamii as4aup 7997656 Bgr_06860 tRNA trnW NC_012846.1 830019 830094 D tRNA-Trp 830019..830094 Bartonella grahamii as4aup 7997658 Bgr_07340 tRNA trnR NC_012846.1 888919 888995 D tRNA-Arg 888919..888995 Bartonella grahamii as4aup 7997706 Bgr_07410 tRNA trnK NC_012846.1 894938 895013 D tRNA-Lys 894938..895013 Bartonella grahamii as4aup 7997713 Bgr_09320 tRNA trnL NC_012846.1 1070865 1070949 R tRNA-Leu complement(1070865..1070949) Bartonella grahamii as4aup 7997902 Bgr_10290 tRNA trnS NC_012846.1 1161726 1161815 R tRNA-Ser complement(1161726..1161815) Bartonella grahamii as4aup 7997999 Bgr_10300 tRNA trnV NC_012846.1 1162725 1162800 R tRNA-Val complement(1162725..1162800) Bartonella grahamii as4aup 7998000 Bgr_10310 tRNA trnD NC_012846.1 1162973 1163049 D tRNA-Asp 1162973..1163049 Bartonella grahamii as4aup 7998001 Bgr_10880 tRNA trnK NC_012846.1 1230380 1230455 R tRNA-Lys complement(1230380..1230455) Bartonella grahamii as4aup 7998058 Bgr_11280 tRNA trnT NC_012846.1 1274618 1274693 D tRNA-Thr 1274618..1274693 Bartonella grahamii as4aup 7998098 Bgr_11320 tRNA trnL NC_012846.1 1277186 1277270 R tRNA-Leu complement(1277186..1277270) Bartonella grahamii as4aup 7998102 Bgr_11640 tRNA trnP NC_012846.1 1312954 1313030 D tRNA-Pro 1312954..1313030 Bartonella grahamii as4aup 7998134 Bgr_11680 tRNA trnV NC_012846.1 1316268 1316342 D tRNA-Val 1316268..1316342 Bartonella grahamii as4aup 7998138 Bgr_11840 tRNA trnR NC_012846.1 1324645 1324721 R tRNA-Arg complement(1324645..1324721) Bartonella grahamii as4aup 7998154 Bgr_11860 tRNA trnP NC_012846.1 1325156 1325232 R tRNA-Pro complement(1325156..1325232) Bartonella grahamii as4aup 7998156 Bgr_12270 tRNA trnE NC_012846.1 1381460 1381534 D tRNA-Glu 1381460..1381534 Bartonella grahamii as4aup 7998197 Bgr_13430 tRNA trnC NC_012846.1 1501650 1501723 R tRNA-Cys complement(1501650..1501723) Bartonella grahamii as4aup 7998311 Bgr_13440 tRNA trnN NC_012846.1 1501908 1501982 D tRNA-Asn 1501908..1501982 Bartonella grahamii as4aup 7998312 Bgr_13480 tRNA trnL NC_012846.1 1507038 1507123 D tRNA-Leu 1507038..1507123 Bartonella grahamii as4aup 7998316 Bgr_14200 tRNA trnM NC_012846.1 1593180 1593256 R tRNA-Met complement(1593180..1593256) Bartonella grahamii as4aup 7998388 Bgr_14470 tRNA trnM NC_012846.1 1624451 1624527 D tRNA-Met 1624451..1624527 Bartonella grahamii as4aup 7998414 Bgr_15460 tRNA trnM NC_012846.1 1748230 1748306 R tRNA-Met complement(1748230..1748306) Bartonella grahamii as4aup 7998511 Bgr_15490 tRNA trnA NC_012846.1 1751851 1751926 R tRNA-Ala complement(1751851..1751926) Bartonella grahamii as4aup 7998514 Bgr_15500 tRNA trnI NC_012846.1 1752176 1752252 R tRNA-Ile complement(1752176..1752252) Bartonella grahamii as4aup 7998515 Bgr_16140 tRNA trnQ NC_012846.1 1856124 1856194 D tRNA-Gln 1856124..1856194 Bartonella grahamii as4aup 7998579 Bgr_16370 tRNA trnS NC_012846.1 1876114 1876204 R tRNA-Ser complement(1876114..1876204) Bartonella grahamii as4aup 7998601 Bgr_16490 tRNA trnM NC_012846.1 1893121 1893197 R tRNA-Met complement(1893121..1893197) Bartonella grahamii as4aup 7998613 Bgr_16520 tRNA trnA NC_012846.1 1896742 1896817 R tRNA-Ala complement(1896742..1896817) Bartonella grahamii as4aup 7998616 Bgr_16530 tRNA trnI NC_012846.1 1897067 1897143 R tRNA-Ile complement(1897067..1897143) Bartonella grahamii as4aup 7998617 Bgr_17380 tRNA trnT NC_012846.1 2006498 2006572 D tRNA-Thr 2006498..2006572 Bartonella grahamii as4aup 7998702 Bgr_17830 tRNA trnL NC_012846.1 2054864 2054948 R tRNA-Leu complement(2054864..2054948) Bartonella grahamii as4aup 7998747 Bgr_19870 tRNA trnG NC_012846.1 2290028 2290102 D tRNA-Gly 2290028..2290102 Bartonella grahamii as4aup 7998950 Bgr_15470 rRNA Bgr_15470 NC_012846.1 1748409 1748528 R 5S ribosomal RNA complement(1748409..1748528) Bartonella grahamii as4aup 7998512 Bgr_15480 rRNA Bgr_15480 NC_012846.1 1748586 1751407 R 23S ribosomal RNA complement(1748586..1751407) Bartonella grahamii as4aup 7998513 Bgr_15510 rRNA Bgr_15510 NC_012846.1 1752751 1754243 R 16S ribosomal RNA complement(1752751..1754243) Bartonella grahamii as4aup 7998516 Bgr_16500 rRNA Bgr_16500 NC_012846.1 1893300 1893419 R 5S ribosomal RNA complement(1893300..1893419) Bartonella grahamii as4aup 7998614 Bgr_16510 rRNA Bgr_16510 NC_012846.1 1893477 1896298 R 23S ribosomal RNA complement(1893477..1896298) Bartonella grahamii as4aup 7998615 Bgr_16540 rRNA Bgr_16540 NC_012846.1 1897642 1899134 R 16S ribosomal RNA complement(1897642..1899134) Bartonella grahamii as4aup 7998618