-- dump date 20140619_001655 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 367928000001 SEQ_END SEQ_END NC_008618.1 2089645 2089645 DR NC_008618.1; contig end 2089645..2089645 Bifidobacterium adolescentis ATCC 15703 YP_908864.1 CDS dnaA NC_008618.1 1 1500 D binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 1..1500 Bifidobacterium adolescentis ATCC 15703 4556250 YP_908865.1 CDS dnaN NC_008618.1 1997 3121 D binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 1997..3121 Bifidobacterium adolescentis ATCC 15703 4556256 YP_908866.1 CDS recF NC_008618.1 3200 4411 D COG family: recombinational DNA repair ATPase; Orthologue of BL0637; recombination protein RecF 3200..4411 Bifidobacterium adolescentis ATCC 15703 4556625 YP_908867.1 CDS BAD_0004 NC_008618.1 4411 4896 D Orthologue of BL0636; hypothetical protein 4411..4896 Bifidobacterium adolescentis ATCC 15703 4556564 YP_908868.1 CDS gyrB NC_008618.1 5177 7315 D negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 5177..7315 Bifidobacterium adolescentis ATCC 15703 4556146 YP_908869.1 CDS gyrA NC_008618.1 7411 10071 D negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 7411..10071 Bifidobacterium adolescentis ATCC 15703 4556144 YP_908870.1 CDS BAD_0007 NC_008618.1 10146 10682 D Orthologue of BL0633; hypothetical protein 10146..10682 Bifidobacterium adolescentis ATCC 15703 4556565 YP_908871.1 CDS gdhA NC_008618.1 10915 12261 R converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; glutamate dehydrogenase complement(10915..12261) Bifidobacterium adolescentis ATCC 15703 4557701 YP_908872.1 CDS mscL NC_008618.1 12452 12895 D COG1970; Orthologue of BL1747; large-conductance mechanosensitive channel 12452..12895 Bifidobacterium adolescentis ATCC 15703 4556423 YP_908873.1 CDS BAD_0010 NC_008618.1 13528 14124 D COG family: predicted metal-dependent hydrolase; COG1451; Orthologue of BL0621; PFAM_ID: DUF45; metal-dependent hydrolase 13528..14124 Bifidobacterium adolescentis ATCC 15703 4556566 YP_908874.1 CDS BAD_0011 NC_008618.1 14138 15487 R COG family: uncharacterized CBS domain-containing proteins; COG1253; PFAM_ID: CBS; PFAM_ID: DUF21; hemolysin-like protein complement(14138..15487) Bifidobacterium adolescentis ATCC 15703 4556567 YP_908875.1 CDS icfA NC_008618.1 15555 16250 R COG family: carbonic anhydrase; COG0288; Orthologue of BL0616; PFAM_ID:Pro_CA; carbonic anhydrase complement(15555..16250) Bifidobacterium adolescentis ATCC 15703 4556188 YP_908876.1 CDS ribAB NC_008618.1 16714 17352 R Identified by sequence similarity; ORF located using Blastx; Orthologue of IL1869_ MHP7448_0272; 3,4-dihydroxy-2-butanone 4-phosphate synthase complement(16714..17352) Bifidobacterium adolescentis ATCC 15703 4556637 YP_908877.1 CDS pra NC_008618.1 17422 17823 R Orthologue of Rv1078; PE family protein (fragment) complement(17422..17823) Bifidobacterium adolescentis ATCC 15703 4556582 YP_908878.1 CDS rps8E NC_008618.1 18079 18501 R Binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30Ssubunit; Identified by similarity to GP:29608270; Orthologue of AF1910_ DET0967; 30S ribosomal protein S8 complement(18079..18501) Bifidobacterium adolescentis ATCC 15703 4556646 YP_908879.1 CDS BAD_0016 NC_008618.1 19708 20613 R Conserved phage-associated protein; Orthologue of PPA1609_ DET1107; hypothetical protein complement(19708..20613) Bifidobacterium adolescentis ATCC 15703 4556568 YP_908880.1 CDS BAD_0017 NC_008618.1 20714 21538 R Orthologue of PPA1609; phage-associated protein complement(20714..21538) Bifidobacterium adolescentis ATCC 15703 4556569 YP_908881.1 CDS BAD_0018 NC_008618.1 21535 21954 R Identified by Glimmer2; putative; Orthologue of DET1106; hypothetical protein complement(21535..21954) Bifidobacterium adolescentis ATCC 15703 4556570 YP_908882.1 CDS BAD_0019 NC_008618.1 22263 23174 R Orthologue of BL0608; hypothetical protein complement(22263..23174) Bifidobacterium adolescentis ATCC 15703 4556571 YP_908883.1 CDS ybfG NC_008618.1 24357 26753 D Orthologue of PPA1591; Peptide glycan binding domain; hypothetical protein 24357..26753 Bifidobacterium adolescentis ATCC 15703 4556766 YP_908884.1 CDS BAD_0021 NC_008618.1 26853 27488 R Orthologue of BL0607; hypothetical protein complement(26853..27488) Bifidobacterium adolescentis ATCC 15703 4556572 YP_908885.1 CDS BAD_0022 NC_008618.1 27518 28351 D Orthologue of BL0606; hypothetical protein 27518..28351 Bifidobacterium adolescentis ATCC 15703 4556573 YP_908886.1 CDS BAD_0023 NC_008618.1 28422 29057 R Orthologue of BL0605; hypothetical protein complement(28422..29057) Bifidobacterium adolescentis ATCC 15703 4556574 YP_908887.1 CDS BAD_0024 NC_008618.1 29202 31958 R Orthologue of BL0604_ Tfu_2554; Phosphoenolpyruvate carboxylase; hypothetical protein complement(29202..31958) Bifidobacterium adolescentis ATCC 15703 4556575 YP_908888.1 CDS BAD_0025 NC_008618.1 32160 33992 D COG family: uncharacterized Bcr; Orthologue of BL0603; Uncharacterized BCR; hypothetical protein 32160..33992 Bifidobacterium adolescentis ATCC 15703 4556576 YP_908889.1 CDS opuE NC_008618.1 34050 35645 D COG family: Na+_proline_ Na+_panthothenate symporters and related permeases; COG0591; Orthologue of BL0602; PFAM_ID: SSF; sodium_proline symporter 34050..35645 Bifidobacterium adolescentis ATCC 15703 4556339 YP_908890.1 CDS trpS NC_008618.1 35784 36884 R COG family:tryptophanyl-tRNA synthetase; COG0180; Orthologue of BL0600; PFAM_ID: tRNA-synt_1b; Tryptophan-tRNA ligase; tryptophanyl-tRNA synthetase complement(35784..36884) Bifidobacterium adolescentis ATCC 15703 4556723 YP_908891.1 CDS BAD_0028 NC_008618.1 37011 37382 D Orthologue of BL0599; hypothetical protein 37011..37382 Bifidobacterium adolescentis ATCC 15703 4556577 YP_908892.1 CDS BAD_0029 NC_008618.1 37518 37955 R Orthologue of BL0598; hypothetical protein complement(37518..37955) Bifidobacterium adolescentis ATCC 15703 4556578 YP_908893.1 CDS glgP NC_008618.1 38284 40740 D COG0058; Orthologue of slr1367_ BL0597; glycogen phosphorylase 38284..40740 Bifidobacterium adolescentis ATCC 15703 4557709 YP_908894.1 CDS pbp1A NC_008618.1 40845 41195 D Orthologue of jk2069; membrane carboxypeptidase 40845..41195 Bifidobacterium adolescentis ATCC 15703 4556348 YP_908895.1 CDS BAD_0032 NC_008618.1 41217 42377 D Identified by Glimmer2; putative; hypothetical protein 41217..42377 Bifidobacterium adolescentis ATCC 15703 4556579 YP_908896.1 CDS BAD_0033 NC_008618.1 42641 43915 D N6-adenine-specific methylase 42641..43915 Bifidobacterium adolescentis ATCC 15703 4557057 YP_908897.1 CDS BAD_0034 NC_008618.1 44105 44572 R integral membrane protein involved in inhibition of the Z-ring formation; putative septation inhibitor protein complement(44105..44572) Bifidobacterium adolescentis ATCC 15703 4557058 YP_908898.1 CDS BAD_0035 NC_008618.1 44708 45487 D Orthologue of BL0592; hypothetical protein 44708..45487 Bifidobacterium adolescentis ATCC 15703 4557059 YP_908899.1 CDS BAD_0036 NC_008618.1 45494 46588 D Orthologue of BL0591; hypothetical protein 45494..46588 Bifidobacterium adolescentis ATCC 15703 4557060 YP_908900.1 CDS pabA NC_008618.1 46667 47314 D COG family: anthranilate_para- aminobenzoatesynthases component II; Orthologue of BL0590; PFAM_ID: GATase; Para-aminobenzoate synthase glutamine amidotransferase component II 46667..47314 Bifidobacterium adolescentis ATCC 15703 4556343 YP_908901.1 CDS pknB NC_008618.1 47433 49493 R COG family: serine_threonine protein kinases; Orthologue of BL0589; PFAM_ID: pkinase; serine-threonine protein kinase complement(47433..49493) Bifidobacterium adolescentis ATCC 15703 4556535 YP_908902.1 CDS pknA NC_008618.1 49490 50434 R COG family: serine_threonine protein kinases; Orthologue of BL0588; PFAM_ID: pkinase; serine-threonine protein kinase complement(49490..50434) Bifidobacterium adolescentis ATCC 15703 4556533 YP_908903.1 CDS pbpA NC_008618.1 50431 51897 R COG family: cell division proteinFtsI_penicillin-binding protein 2; Orthologue of BL0587; PFAM_ID:Transpeptidase; penicillin binding protein transpeptidase complement(50431..51897) Bifidobacterium adolescentis ATCC 15703 4556544 YP_908904.1 CDS rodA NC_008618.1 51890 53473 R COG family: bacterial cell divisionmembrane protein; Orthologue of BL0586; PFAM_ID: FTSW_RODA_SPOVE; protein involved in cell wall formation and stabilization of the FtsZ ring during cell division complement(51890..53473) Bifidobacterium adolescentis ATCC 15703 4556668 YP_908905.1 CDS BAD_0042 NC_008618.1 53470 55092 R COG family: protein serine_threonine phosphatases; Orthologue of BL0585; phosphoprotein phosphatase complement(53470..55092) Bifidobacterium adolescentis ATCC 15703 4557061 YP_908906.1 CDS BAD_0043 NC_008618.1 55089 55604 R COG family: FHA-domain-containing proteins; Orthologue of BL0584; PFAM_ID: FHA; hypothetical protein complement(55089..55604) Bifidobacterium adolescentis ATCC 15703 4557062 YP_908907.1 CDS BAD_0044 NC_008618.1 55633 56340 R COG family: FHA-domain-containing proteins; Orthologue of BL0583; PFAM_ID: FHA; hypothetical protein complement(55633..56340) Bifidobacterium adolescentis ATCC 15703 4557063 YP_908908.1 CDS BAD_0045 NC_008618.1 56490 59000 D COG family: dipeptidylaminopeptidases_acylaminoacyl -peptidases; Orthologue of BL0582; dipeptidyl peptidase IV 56490..59000 Bifidobacterium adolescentis ATCC 15703 4557064 YP_908909.1 CDS BAD_0046 NC_008618.1 59226 60515 R Orthologue of CE2341; hypothetical protein complement(59226..60515) Bifidobacterium adolescentis ATCC 15703 4557065 YP_908910.1 CDS BAD_0047 NC_008618.1 60505 61170 R COG family: response regulators consisting of aCheY-like receiver domain and a HTH DNA-binding domain; Orthologue of BL0903; PFAM_ID: GerE; PFAM_ID: response_reg; response regulator of two-component system complement(60505..61170) Bifidobacterium adolescentis ATCC 15703 4557066 YP_908911.1 CDS BAD_0048 NC_008618.1 61460 62524 D COG family: lysophospholipase; Orthologue of BL0581; PFAM_ID:abhydrolase; hypothetical protein 61460..62524 Bifidobacterium adolescentis ATCC 15703 4557067 YP_908912.1 CDS BAD_0049 NC_008618.1 62598 63500 D Orthologue of str1623; putative permease 62598..63500 Bifidobacterium adolescentis ATCC 15703 4557068 YP_908913.1 CDS BAD_0050 NC_008618.1 63623 64252 D Identified by match to protein family HMM PF00753; Orthologue of BTH_I2788; hydroxyacylglutathione hydrolase 63623..64252 Bifidobacterium adolescentis ATCC 15703 4557069 YP_908914.1 CDS BAD_0051 NC_008618.1 64283 64600 D Orthologue of Ava_2828; transport system permease 64283..64600 Bifidobacterium adolescentis ATCC 15703 4557070 YP_908915.1 CDS BAD_0052 NC_008618.1 65182 65508 R Orthologue of CAC3033; hypothetical protein complement(65182..65508) Bifidobacterium adolescentis ATCC 15703 4557071 YP_908916.1 CDS ygaT NC_008618.1 65538 66023 R Orthologue of Bcep18194_B2659; hypothetical protein complement(65538..66023) Bifidobacterium adolescentis ATCC 15703 4556771 YP_908917.1 CDS recD NC_008618.1 66140 67573 D Orthologue of SAV5329; PF05127: Putative ATPase (DUF699); putative exodeoxyribonuclease V 66140..67573 Bifidobacterium adolescentis ATCC 15703 4556624 YP_908918.1 CDS BAD_0055 NC_008618.1 67644 68375 D COG family: response regulators consisting of aCheY-like receiver domain and a HTH DNA-binding domain; Orthologue of BL0903; PFAM_ID: GerE; PFAM_ID: response_reg; response regulator of two-component system 67644..68375 Bifidobacterium adolescentis ATCC 15703 4557072 YP_908919.1 CDS tgt NC_008618.1 68587 70047 R COG family: queuine_archaeosinetRNA- ribosyltransferase; Guanine insertion enzyme Tgt; Orthologue of BL0556; PFAM_ID: TGT; tRNA-guanine transglycosylase; queuine tRNA-ribosyltransferase complement(68587..70047) Bifidobacterium adolescentis ATCC 15703 4556463 YP_908920.1 CDS degP NC_008618.1 70216 72141 D COG family: trypsin-like serineproteases_ typically periplasmic_ contain C-terminal PDZdomain; DegP or HtrA; Orthologue of BL0555; PFAM_ID: PDZ; PFAM_ID: trypsin; DO serine protease 70216..72141 Bifidobacterium adolescentis ATCC 15703 4556248 YP_908921.1 CDS BAD_0058 NC_008618.1 72497 74806 D COG family: cation transport ATPases; Orthologue of BL0554; PFAM_ID: Hydrolase; PFAM_ID:E1-E2_ATPase; cation-transporting ATPase V 72497..74806 Bifidobacterium adolescentis ATCC 15703 4557073 YP_908922.1 CDS BAD_0059 NC_008618.1 74857 75927 R Orthologue of PPA0367; L-asparaginase I complement(74857..75927) Bifidobacterium adolescentis ATCC 15703 4557074 YP_908923.1 CDS BAD_0060 NC_008618.1 76153 77937 D Orthologue of sll0641; hypothetical protein 76153..77937 Bifidobacterium adolescentis ATCC 15703 4557075 YP_908924.1 CDS fprA NC_008618.1 78010 79470 D COG family: NADPH-dependent glutamatesynthase beta chain and related oxidoreductases; Orthologue of BL0552; PFAM_ID:pyr_redox; ferredoxin/ferredoxin-NADP reductase 78010..79470 Bifidobacterium adolescentis ATCC 15703 4556976 YP_908925.1 CDS htpX NC_008618.1 79703 80833 D putative metalloprotease; heat shock protein HtpX 79703..80833 Bifidobacterium adolescentis ATCC 15703 4556184 YP_908926.1 CDS BAD_0063 NC_008618.1 81673 82659 D COG family: permeases of the drug_metabolitetransporter (Dmt) superfamily; Orthologue of BL0575; PFAM_ID: DUF6; hypothetical protein 81673..82659 Bifidobacterium adolescentis ATCC 15703 4557076 YP_908927.1 CDS pip NC_008618.1 82999 85323 R COG family: predicted membrane protein; Orthologue of BL0137; hypothetical protein complement(82999..85323) Bifidobacterium adolescentis ATCC 15703 4556532 YP_908928.1 CDS BAD_0065 NC_008618.1 85326 88037 R COG family: predicted membrane protein; Orthologue of BL0138; hypothetical protein complement(85326..88037) Bifidobacterium adolescentis ATCC 15703 4557622 YP_908929.1 CDS fba NC_008618.1 88346 89413 D catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate; fructose-bisphosphate aldolase 88346..89413 Bifidobacterium adolescentis ATCC 15703 4556963 YP_908930.1 CDS purA NC_008618.1 89599 90885 D catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 89599..90885 Bifidobacterium adolescentis ATCC 15703 4556691 YP_908931.1 CDS BAD_0068 NC_008618.1 90933 92660 D COG family: chloride channel protein EriC; Orthologue of BL0548; PFAM_ID: TrkA; PFAM_ID:voltage_CLC; voltage gated channel protein 90933..92660 Bifidobacterium adolescentis ATCC 15703 4557623 YP_908932.1 CDS crcB2 NC_008618.1 92801 93943 D COG family: integral membrane protein possiblyinvolved in chromosome condensation; Orthologue of BL1091; PFAM_ID: CRCB; CrcB-like protein 92801..93943 Bifidobacterium adolescentis ATCC 15703 4557577 YP_908933.1 CDS BAD_0070 NC_008618.1 94436 95905 D Orthologue of Tfu_1182; branched-chain amino acid ABC transporter permease 94436..95905 Bifidobacterium adolescentis ATCC 15703 4557624 YP_908934.1 CDS BAD_0071 NC_008618.1 95909 96892 D Orthologue of Tfu_1183; branched-chain amino acid transport system permease 95909..96892 Bifidobacterium adolescentis ATCC 15703 4557625 YP_908935.1 CDS BAD_0072 NC_008618.1 96966 97916 D Orthologue of Tfu_1184; branched-chain amino acid transport system ATP-binding protein 96966..97916 Bifidobacterium adolescentis ATCC 15703 4557626 YP_908936.1 CDS LivF NC_008618.1 97918 98727 D Orthologue of Tfu_1185; branched-chain amino acid ABC transporter ATPase 97918..98727 Bifidobacterium adolescentis ATCC 15703 4556350 YP_908937.1 CDS LivF NC_008618.1 99086 100387 D Orthologue of Tfu_1186; branched-chain amino acid transport system substrate-binding protein 99086..100387 Bifidobacterium adolescentis ATCC 15703 4556351 YP_908938.1 CDS BAD_0075 NC_008618.1 100769 101854 D COG family: transcriptional regulators; Orthologue of BL0546; PFAM_ID: Peripla_BP_like; PFAM_ID:lacI; LacI-type transcriptional regulator 100769..101854 Bifidobacterium adolescentis ATCC 15703 4557627 YP_908939.1 CDS pabC NC_008618.1 101915 102868 R catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate; 4-amino-4-deoxychorismate lyase complement(101915..102868) Bifidobacterium adolescentis ATCC 15703 4556344 YP_908940.1 CDS BAD_0077 NC_008618.1 103080 103985 D Orthologue of jk0403; hypothetical protein 103080..103985 Bifidobacterium adolescentis ATCC 15703 4557628 YP_908941.1 CDS spl NC_008618.1 104792 106306 D COG family:glycosidases; Orthologue of BL0536; PFAM_ID: alpha-amylase; Sucrose glucosyltransferase Spl; sucrose phosphorylase 104792..106306 Bifidobacterium adolescentis ATCC 15703 4556453 YP_908942.1 CDS BAD_0079 NC_008618.1 106598 108190 D COG family: permeases of the major facilitatorsuperfamily; Orthologue of BL0534; hypothetical protein 106598..108190 Bifidobacterium adolescentis ATCC 15703 4557629 YP_908943.1 CDS shiA NC_008618.1 108669 110018 D COG family: permeases of the majorfacilitator superfamily; Orthologue of BL0532; PFAM_ID: sugar_tr; transmembrane transport protein 108669..110018 Bifidobacterium adolescentis ATCC 15703 4556447 YP_908944.2 CDS ilvC2 NC_008618.1 110304 111356 D catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 110304..111356 Bifidobacterium adolescentis ATCC 15703 4556214 YP_908945.1 CDS ilvC1 NC_008618.1 111553 112593 R catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase complement(111553..112593) Bifidobacterium adolescentis ATCC 15703 4556213 YP_908946.1 CDS BAD_0083 NC_008618.1 112996 114870 D Cytosolic sialic acid; Orthologue of RB10048; Sialic-acid O-acetylesterase; sialic acid-specific9-O-acetylesterase; sialic acid-specific 9-O-acetylesterase 112996..114870 Bifidobacterium adolescentis ATCC 15703 4557630 YP_908947.1 CDS aroP NC_008618.1 115008 116537 R Orthologue of BL0152; aromatic amino acid transport protein AroP complement(115008..116537) Bifidobacterium adolescentis ATCC 15703 4557682 YP_908948.1 CDS BAD_0085 NC_008618.1 116725 119886 D COG family: ABC-type transport systems_ involved inlipoprotein release_ permease components; Orthologue of BL0155; PFAM_ID: DUF214; hypothetical protein 116725..119886 Bifidobacterium adolescentis ATCC 15703 4557631 YP_908949.1 CDS BAD_0086 NC_008618.1 119905 121179 R Orthologue of DIP0794; Similar putative integral membrane efflux protein,Na(+)_H(+)antiporter NapA; Na(+)/H(+) antiporter-like protein complement(119905..121179) Bifidobacterium adolescentis ATCC 15703 4557632 YP_908950.1 CDS BAD_0087 NC_008618.1 122116 122919 D COG family: sortase (surface proteintranspeptidase); Orthologue of BL0498; sortase 122116..122919 Bifidobacterium adolescentis ATCC 15703 4557633 YP_908951.1 CDS aapA NC_008618.1 123032 124609 D COG family: gamma-aminobutyrate permease andrelated permeases; Orthologue of BL0156; PFAM_ID: aa_permeases; amino acid permease 123032..124609 Bifidobacterium adolescentis ATCC 15703 4557055 YP_908952.1 CDS thiG NC_008618.1 124790 125704 R functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase complement(124790..125704) Bifidobacterium adolescentis ATCC 15703 4556465 YP_908953.1 CDS BAD_0090 NC_008618.1 125855 126568 R catalyzes the adenylation of ThiS which is involved in the formation of 5-methyl-4-(beta-hydroxyethyl)thiazole phosphate; thiamine biosynthesis protein ThiF complement(125855..126568) Bifidobacterium adolescentis ATCC 15703 4557634 YP_908954.1 CDS BAD_0091 NC_008618.1 127216 128274 D Orthologue of BL1023; aldo/keto reductase family oxidoreductase 127216..128274 Bifidobacterium adolescentis ATCC 15703 4557635 YP_908955.1 CDS BAD_0092 NC_008618.1 128458 128949 D COG family: transcriptional regulators; Orthologue of BL0160; PFAM_ID:MarR; MarR-type transcriptional regulator 128458..128949 Bifidobacterium adolescentis ATCC 15703 4557636 YP_908956.1 CDS BAD_0093 NC_008618.1 129076 130827 D COG family: ABC-type multidrug_protein_lipidtransport system_ ATPase component; Orthologue of BL0162; PFAM_ID: ABC_membrane; PFAM_ID: ABC_tran; ABC transporter permease 129076..130827 Bifidobacterium adolescentis ATCC 15703 4557637 YP_908957.1 CDS BAD_0094 NC_008618.1 130839 132680 D Orthologue of str0434_BL0163; ABC transporter permease 130839..132680 Bifidobacterium adolescentis ATCC 15703 4557638 YP_908958.1 CDS BAD_0095 NC_008618.1 132851 133831 D Orthologue of lp_3100; oxidoreductase 132851..133831 Bifidobacterium adolescentis ATCC 15703 4557639 YP_908959.1 CDS BAD_0096 NC_008618.1 133916 135049 R COG family: membrane-associated lipoproteininvolved in thiamine biosynthesis; Orthologue of BL0164; PFAM_ID: ApbE; hypothetical protein complement(133916..135049) Bifidobacterium adolescentis ATCC 15703 4557640 YP_908960.1 CDS BAD_0097 NC_008618.1 135393 137180 D COG family: high-affinity iron permease; Orthologue of BL0455; hypothetical protein 135393..137180 Bifidobacterium adolescentis ATCC 15703 4557367 YP_908961.1 CDS BAD_0098 NC_008618.1 137242 137901 D COG family: predicted periplasmic_secreted protein; Orthologue of BL0454; hypothetical protein 137242..137901 Bifidobacterium adolescentis ATCC 15703 4557368 YP_908962.1 CDS BAD_0099 NC_008618.1 138168 139439 D Orthologue of BL0453; hypothetical protein 138168..139439 Bifidobacterium adolescentis ATCC 15703 4557369 YP_908963.1 CDS BAD_0100 NC_008618.1 139465 140964 D COG family: ABC-type transport systems_ involved inlipoprotein release_ permease components; Orthologue of BL0452; PFAM_ID: DUF214; ABC transporter permease 139465..140964 Bifidobacterium adolescentis ATCC 15703 4557370 YP_908964.1 CDS BAD_0101 NC_008618.1 140995 142299 D COG family: ABC-type transport systems_ involved inlipoprotein release_ permease components; Orthologue of BL0451; PFAM_ID: DUF214; ABC transporter permease 140995..142299 Bifidobacterium adolescentis ATCC 15703 4557371 YP_908965.1 CDS BAD_0102 NC_008618.1 142317 143192 D COG family: ABC-type transport systems_ involved inlipoprotein release_ ATPase components; Orthologue of BL0450; PFAM_ID: ABC_tran; ABC transporter ATP-binding protein 142317..143192 Bifidobacterium adolescentis ATCC 15703 4557372 YP_908966.1 CDS BAD_0103 NC_008618.1 143189 143746 D Orthologue of BL0449; hypothetical protein 143189..143746 Bifidobacterium adolescentis ATCC 15703 4557373 YP_908967.1 CDS BAD_0104 NC_008618.1 143811 144488 R COG family: transcriptional regulator; Orthologue of BL0448; PFAM_ID:tetR; TetR-type transcriptional regulator complement(143811..144488) Bifidobacterium adolescentis ATCC 15703 4557374 YP_908968.1 CDS BAD_0105 NC_008618.1 144488 146683 R COG family: predicted membrane protein; Orthologue of BL0447; putative phage infection protein complement(144488..146683) Bifidobacterium adolescentis ATCC 15703 4557375 YP_908969.1 CDS BAD_0106 NC_008618.1 146680 149508 R COG family: predicted membrane protein; Orthologue of BL0446; putative phage infection protein complement(146680..149508) Bifidobacterium adolescentis ATCC 15703 4557376 YP_908970.1 CDS BAD_0107 NC_008618.1 149971 151275 D Orthologue of BL0445; hypothetical protein 149971..151275 Bifidobacterium adolescentis ATCC 15703 4557377 YP_908971.1 CDS pepDB NC_008618.1 152443 153948 D Orthologue of BL0439; dipeptidase 152443..153948 Bifidobacterium adolescentis ATCC 15703 4556555 YP_908972.1 CDS BAD_0109 NC_008618.1 154092 155123 R COG family: glycosyltransferases involved in cellwall biogenesis; Orthologue of BL0438; PFAM_ID: Glycos_transf_2; glycosyltransferase complement(154092..155123) Bifidobacterium adolescentis ATCC 15703 4557378 YP_908973.1 CDS BAD_0110 NC_008618.1 155307 156200 R COG family: transcriptional regulator; Orthologue of BL0437; PFAM_ID:tetR; TetR-type transcriptional regulator complement(155307..156200) Bifidobacterium adolescentis ATCC 15703 4557379 YP_908974.1 CDS ftsY NC_008618.1 156967 158229 D COG family: signalrecognition particle GTPase; Orthologue of BL0436; PFAM_ID: SRP54_N; PFAM_ID:SRP54; docking protein; FtsY; FtsY signal recognition particle 156967..158229 Bifidobacterium adolescentis ATCC 15703 4557236 YP_908975.1 CDS napA1 NC_008618.1 158316 159506 R Orthologue of lp_0400; Na(+)/H(+) antiporter complement(158316..159506) Bifidobacterium adolescentis ATCC 15703 4556386 YP_908976.1 CDS amtP NC_008618.1 159921 161216 D COG family: ammonia permeases; Orthologue of BL0435; PFAM_ID:Ammonium_transp; ammonium transporter 159921..161216 Bifidobacterium adolescentis ATCC 15703 4557209 YP_908977.1 CDS glnB NC_008618.1 161218 161556 D COG family: nitrogen regulatory protein pII; Orthologue of BL0434; PFAM_ID: P-II; nitrogen regulatory protein N-II 161218..161556 Bifidobacterium adolescentis ATCC 15703 4557713 YP_908978.1 CDS glnD NC_008618.1 161713 163539 D COG family: UTP; Orthologue of BL0433; Uridylyl removing enzyme; protein-PII uridylyltransferase 161713..163539 Bifidobacterium adolescentis ATCC 15703 4557714 YP_908979.1 CDS dnaB NC_008618.1 163925 165382 D COG family: replicative DNA helicase; Orthologue of BL0431; PFAM_ID: DnaB; replicative DNA helicase 163925..165382 Bifidobacterium adolescentis ATCC 15703 4556251 YP_908980.1 CDS BAD_0117 NC_008618.1 165384 166967 D COG family: UDP-N-acetylmuramyl tripeptidesynthase; Orthologue of BL0430; PFAM_ID: Mur_ligase; hypothetical protein 165384..166967 Bifidobacterium adolescentis ATCC 15703 4557380 YP_908981.1 CDS BAD_0118 NC_008618.1 167033 167791 D COG family: predicted glutamine amidotransferase; Orthologue of BL0429; cobyric acid synthase CobQ 167033..167791 Bifidobacterium adolescentis ATCC 15703 4557381 YP_908982.1 CDS BAD_0119 NC_008618.1 167859 168179 D COG family: chaperonin GroEL (Hsp60 family); Orthologue of BL0428; hypothetical protein 167859..168179 Bifidobacterium adolescentis ATCC 15703 4557382 YP_908983.1 CDS BAD_0120 NC_008618.1 168694 170199 D COG family: predicted unusual protein kinase; Orthologue of BL0427; PFAM_ID: ABC1; hypothetical protein 168694..170199 Bifidobacterium adolescentis ATCC 15703 4557383 YP_908984.1 CDS BAD_0121 NC_008618.1 170413 171123 D Orthologue of lmo2085; putative peptidoglycan bound protein 170413..171123 Bifidobacterium adolescentis ATCC 15703 4557384 YP_908985.1 CDS BAD_0122 NC_008618.1 171257 172141 D Orthologue of M6_Spy0161; sortase 171257..172141 Bifidobacterium adolescentis ATCC 15703 4557385 YP_908986.1 CDS BAD_0123 NC_008618.1 172645 173715 D COG family: glycerophosphoryl diesterphosphodiesterase; Orthologue of BL1252; PFAM_ID: GDPD; phosphodiesterase 172645..173715 Bifidobacterium adolescentis ATCC 15703 4557386 YP_908987.1 CDS upp NC_008618.1 173876 174517 R Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase complement(173876..174517) Bifidobacterium adolescentis ATCC 15703 4556737 YP_908988.1 CDS BAD_0125 NC_008618.1 174872 175648 R Identified by sequence similarity; Orthologue of Lxx18480; hypothetical protein complement(174872..175648) Bifidobacterium adolescentis ATCC 15703 4556291 YP_908989.1 CDS mutT1 NC_008618.1 175650 176738 R COG family: NTP pyrophosphohydrolasesincluding oxidative damage repair enzymes; Orthologue of BL1258; PFAM_ID: NUDIX; MutT1 protein complement(175650..176738) Bifidobacterium adolescentis ATCC 15703 4556381 YP_908990.1 CDS ppk NC_008618.1 176846 179080 R catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase complement(176846..179080) Bifidobacterium adolescentis ATCC 15703 4556543 YP_908991.1 CDS BAD_0128 NC_008618.1 179939 180763 D COG family: septum formation inhibitor-activatingATPase; Orthologue of BL0509; hypothetical protein 179939..180763 Bifidobacterium adolescentis ATCC 15703 4556292 YP_908992.1 CDS BAD_0129 NC_008618.1 180744 181736 D COG family: predicted ATPases involved in pili andflagella biosynthesis_ VirB11 family; Orthologue of BL0508; PFAM_ID: GSPII_E; hypothetical protein 180744..181736 Bifidobacterium adolescentis ATCC 15703 4556293 YP_908993.1 CDS BAD_0130 NC_008618.1 181736 182506 D Orthologue of BL0507; hypothetical protein 181736..182506 Bifidobacterium adolescentis ATCC 15703 4556294 YP_908994.1 CDS BAD_0131 NC_008618.1 182503 183018 D Orthologue of BL0506; hypothetical protein 182503..183018 Bifidobacterium adolescentis ATCC 15703 4556295 YP_908995.1 CDS BAD_0132 NC_008618.1 183285 183572 D Orthologue of BL0505; hypothetical protein 183285..183572 Bifidobacterium adolescentis ATCC 15703 4556296 YP_908996.1 CDS BAD_0133 NC_008618.1 183575 183940 D Orthologue of BL0504; hypothetical protein 183575..183940 Bifidobacterium adolescentis ATCC 15703 4556297 YP_908997.1 CDS BAD_0134 NC_008618.1 183993 184412 D Orthologue of BL0503; hypothetical protein 183993..184412 Bifidobacterium adolescentis ATCC 15703 4556298 YP_908998.1 CDS BAD_0135 NC_008618.1 184435 185625 D COG family: uncharacterized Acr; Orthologue of BL0502; PFAM_ID: DAGKc; hypothetical protein 184435..185625 Bifidobacterium adolescentis ATCC 15703 4556299 YP_908999.1 CDS BAD_0136 NC_008618.1 185729 186367 R COG family: transcriptional regulator; Orthologue of BL0501; PFAM_ID:tetR; TetR-type transcriptional regulator complement(185729..186367) Bifidobacterium adolescentis ATCC 15703 4556300 YP_909000.1 CDS dnaX NC_008618.1 186591 189035 D catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau 186591..189035 Bifidobacterium adolescentis ATCC 15703 4556258 YP_909001.1 CDS recR NC_008618.1 189152 189754 D involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 189152..189754 Bifidobacterium adolescentis ATCC 15703 4556631 YP_909002.1 CDS askA NC_008618.1 189874 190635 D Aspartokinase alpha subunit; AskA; COG family:aspartokinases; Orthologue of BL0494; PFAM_ID: aakinase; aspartokinase 189874..190635 Bifidobacterium adolescentis ATCC 15703 4557685 YP_909003.1 CDS askB NC_008618.1 190752 191294 D Aspartokinase beta subunit; AskB; COG family:aspartokinases; Orthologue of BL0493; PFAM_ID: ACT; aspartokinase 190752..191294 Bifidobacterium adolescentis ATCC 15703 4557686 YP_909004.1 CDS asd NC_008618.1 191510 192604 R catalyzes the formation of aspartate semialdehyde from aspartyl phosphate; aspartate-semialdehyde dehydrogenase complement(191510..192604) Bifidobacterium adolescentis ATCC 15703 4557684 YP_909005.1 CDS BAD_0142 NC_008618.1 192793 193434 D Orthologue of BL0491; hypothetical protein 192793..193434 Bifidobacterium adolescentis ATCC 15703 4556301 YP_909006.1 CDS pknB NC_008618.1 193503 196046 D COG family: serine_threonine protein kinases; Orthologue of HTA426; PFAM_ID: pkinase; serine_threonine protein kinase 193503..196046 Bifidobacterium adolescentis ATCC 15703 4556536 YP_909007.1 CDS BAD_0144 NC_008618.1 196123 197646 R Orthologue of BL0490; hypothetical protein complement(196123..197646) Bifidobacterium adolescentis ATCC 15703 4556302 YP_909008.1 CDS BAD_0145 NC_008618.1 197848 199758 D Orthologue of Rv3710_BL0448; leuA_alpha-isopropylmalate synthase (EC 4.1.3.12); 2-isopropylmalate synthase 197848..199758 Bifidobacterium adolescentis ATCC 15703 4556303 YP_909009.1 CDS BAD_0146 NC_008618.1 200017 201081 D Orthologue of BL0184; alpha-arabinofuranosidase 200017..201081 Bifidobacterium adolescentis ATCC 15703 4556304 YP_909010.1 CDS BAD_0147 NC_008618.1 201172 201954 R Orthologue of CE1245; hypothetical protein complement(201172..201954) Bifidobacterium adolescentis ATCC 15703 4556305 YP_909011.1 CDS BAD_0148 NC_008618.1 201947 203410 R Orthologue of CE1244; putative transposase complement(201947..203410) Bifidobacterium adolescentis ATCC 15703 4556306 YP_909012.1 CDS BAD_0149 NC_008618.1 203538 204662 D Orthologue of BL0184; alpha-arabinofuranosidase 203538..204662 Bifidobacterium adolescentis ATCC 15703 4556307 YP_909013.1 CDS BAD_0150 NC_008618.1 204672 205763 D COG family: transcriptional regulators; Orthologue of BL0185; PFAM_ID: Peripla_BP_like; PFAM_ID:lacI; LacI-type transcriptional regulator 204672..205763 Bifidobacterium adolescentis ATCC 15703 4556308 YP_909014.1 CDS BAD_0151 NC_008618.1 205760 206044 D Identified by Glimmer2; putative; Orthologue of BMAA0057; hypothetical protein 205760..206044 Bifidobacterium adolescentis ATCC 15703 4556309 YP_909015.1 CDS BAD_0152 NC_008618.1 206077 207138 D Orthologue of BL0187; exo-alpha-L-arabinofuranosidase II 206077..207138 Bifidobacterium adolescentis ATCC 15703 4556020 YP_909016.1 CDS BAD_0153 NC_008618.1 207439 208719 D COG family: sugar-binding periplasmicproteins_domains; Orthologue of BL0188; PFAM_ID: SBP_bacterial_1; ABC transporter substrate-binding protein 207439..208719 Bifidobacterium adolescentis ATCC 15703 4556021 YP_909017.1 CDS BAD_0154 NC_008618.1 208807 209757 D COG family: ABC-type sugar transport systems_permease components; Orthologue of BL0189; PFAM_ID: BPD_transp; sugar ABC transporter permease 208807..209757 Bifidobacterium adolescentis ATCC 15703 4556022 YP_909018.1 CDS BAD_0155 NC_008618.1 209757 210644 D COG family: sugar permeases; Orthologue of BL0190; PFAM_ID: BPD_transp; sugar ABC transporter permease 209757..210644 Bifidobacterium adolescentis ATCC 15703 4556023 YP_909019.1 CDS BAD_0156 NC_008618.1 210652 211923 D Orthologue of gll2003; hypothetical protein 210652..211923 Bifidobacterium adolescentis ATCC 15703 4556024 YP_909020.1 CDS BAD_0157 NC_008618.1 212410 214725 R COG family: membrane carboxypeptidase(penicillin-binding protein); Orthologue of BL0487; PFAM_ID: Transglycosyl; PFAM_ID: Transpeptidase; penicillin-binding protein complement(212410..214725) Bifidobacterium adolescentis ATCC 15703 4556025 YP_909021.1 CDS BAD_0158 NC_008618.1 214937 216079 D Orthologue of Tfu_3099; myo-inositol-1-phosphate synthase 214937..216079 Bifidobacterium adolescentis ATCC 15703 4556026 YP_909022.1 CDS gif NC_008618.1 216306 217484 R COG family: UDP-galactopyranose mutase; Orthologue of BL1245; UDP-galactopyranose mutase complement(216306..217484) Bifidobacterium adolescentis ATCC 15703 4557704 YP_909023.1 CDS BAD_0160 NC_008618.1 217768 218859 D COG family: membrane-associated phospholipidphosphatase; Orthologue of BL0486; PFAM_ID: PAP2; pre-pilin peptidase 217768..218859 Bifidobacterium adolescentis ATCC 15703 4556027 YP_909024.1 CDS topA NC_008618.1 218965 222048 D Catalyzes the ATP-dependent breakage ofsignle-stranded DNA followed by passage and rejoining_maintains net negative superhelicity; Orthologue of Rv3646c_BL0485; DNA topoisomerase I 218965..222048 Bifidobacterium adolescentis ATCC 15703 4557656 YP_909025.1 CDS BAD_0162 NC_008618.1 222170 222823 D COG family: thymidylate kinase; Orthologue of BL0484; PFAM_ID: Thymidylate_kin; dTMP kinase; thymidylate kinase 222170..222823 Bifidobacterium adolescentis ATCC 15703 4556028 YP_909026.1 CDS BAD_0163 NC_008618.1 222820 223968 D catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' 222820..223968 Bifidobacterium adolescentis ATCC 15703 4556029 YP_909027.1 CDS rbsR NC_008618.1 224011 225066 R Orthologue of SAV5320; Transcriptional regulator mediating carboncatabolite repression; LacI family transcriptional regulator complement(224011..225066) Bifidobacterium adolescentis ATCC 15703 4556619 YP_909028.1 CDS BAD_0165 NC_008618.1 225274 225612 R Identified by Glimmer2; putative; Orthologue of BURPS1710b_0065; hypothetical protein complement(225274..225612) Bifidobacterium adolescentis ATCC 15703 4556030 YP_909029.1 CDS ptsI NC_008618.1 225852 227546 D Identified by sequence similarity; Orthologue of Lxx00830; PTS system, enzyme I 225852..227546 Bifidobacterium adolescentis ATCC 15703 4556687 YP_909030.1 CDS BAD_0167 NC_008618.1 227684 228373 D Orthologue of SAR0943; Similar to Bacillus subtilis hypothetical protein YxkA; hypothetical protein 227684..228373 Bifidobacterium adolescentis ATCC 15703 4556031 YP_909031.1 CDS pepD NC_008618.1 228482 230074 D Orthologue of BL0479; dipeptidase 228482..230074 Bifidobacterium adolescentis ATCC 15703 4556554 YP_909032.1 CDS fhs NC_008618.1 230264 231847 D COG family: formyltetrahydrofolate synthetase; Orthologue of BL0478; PFAM_ID:FTHFS; formyltetrahydrofolate synthetase; formate-tetrahydrofolate ligase 230264..231847 Bifidobacterium adolescentis ATCC 15703 4556968 YP_909033.1 CDS BAD_0170 NC_008618.1 232301 232648 R Orthologue of BL0477; hypothetical protein complement(232301..232648) Bifidobacterium adolescentis ATCC 15703 4556032 YP_909034.1 CDS BAD_0171 NC_008618.1 232732 233292 D COG family: uncharacterized membrane protein; Orthologue of BL0476; hypothetical protein 232732..233292 Bifidobacterium adolescentis ATCC 15703 4556033 YP_909035.1 CDS BAD_0172 NC_008618.1 233415 234839 R COG family: permeases of the major facilitatorsuperfamily; Orthologue of BL0475; hypothetical protein complement(233415..234839) Bifidobacterium adolescentis ATCC 15703 4556034 YP_909036.1 CDS BAD_0173 NC_008618.1 235218 235877 D COG family: phosphoglyceratemutase_fructose-2_6- bisphosphatase; Orthologue of BL0474; PFAM_ID: PGAM; hypothetical protein 235218..235877 Bifidobacterium adolescentis ATCC 15703 4556035 YP_909037.1 CDS BAD_0174 NC_008618.1 235961 237022 D Orthologue of BL0473; hypothetical protein 235961..237022 Bifidobacterium adolescentis ATCC 15703 4556036 YP_909038.1 CDS BAD_0175 NC_008618.1 237282 238598 R COG family: uncharacterized membrane protein; Orthologue of BL0471; hypothetical protein complement(237282..238598) Bifidobacterium adolescentis ATCC 15703 4556037 YP_909039.1 CDS gltX NC_008618.1 238766 240286 D Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 238766..240286 Bifidobacterium adolescentis ATCC 15703 4556159 YP_909040.1 CDS BAD_0177 NC_008618.1 240838 242301 D COG family: predicted phosphohydrolases; Orthologue of BL1260; hypothetical protein 240838..242301 Bifidobacterium adolescentis ATCC 15703 4556038 YP_909041.1 CDS BAD_0178 NC_008618.1 242411 243235 R COG family: transcriptional regulator; Orthologue of BL1261; PFAM_ID:IclR; IclR-type transcriptional regulator complement(242411..243235) Bifidobacterium adolescentis ATCC 15703 4556039 YP_909042.1 CDS leuC NC_008618.1 243552 244955 D dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 243552..244955 Bifidobacterium adolescentis ATCC 15703 4556279 YP_909043.1 CDS leuD NC_008618.1 245045 245734 D catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit 245045..245734 Bifidobacterium adolescentis ATCC 15703 4556280 YP_909044.1 CDS BAD_0181 NC_008618.1 246136 247749 D Orthologue of GK0575_BL1784; hypothetical protein 246136..247749 Bifidobacterium adolescentis ATCC 15703 4556040 YP_909045.1 CDS BAD_0182 NC_008618.1 247942 249084 D COG family: dihydroorotate dehydrogenase; Orthologue of BL1265; PFAM_ID:DHOdehase; hypothetical protein 247942..249084 Bifidobacterium adolescentis ATCC 15703 4556041 YP_909046.1 CDS murA NC_008618.1 249180 250505 D adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 249180..250505 Bifidobacterium adolescentis ATCC 15703 4556371 YP_909047.1 CDS BAD_0184 NC_008618.1 250836 251756 D COG family: 1-acyl-sn-glycerol-3- phosphateacyltransferase; Orthologue of BL0347; PFAM_ID: Acyltransferase; hypothetical protein 250836..251756 Bifidobacterium adolescentis ATCC 15703 4556042 YP_909048.1 CDS gpsA NC_008618.1 251928 252926 D catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 251928..252926 Bifidobacterium adolescentis ATCC 15703 4556043 YP_909049.1 CDS ddl NC_008618.1 253001 254137 D D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanyl-alanine synthetase A 253001..254137 Bifidobacterium adolescentis ATCC 15703 4556245 YP_909050.1 CDS BAD_0187 NC_008618.1 254369 255535 D COG family: ABC-type iron_thiamine transportsystems_ periplasmic component; Orthologue of BL0344; PFAM_ID: SBP_bacterial_1; ABC transporter substrate-binding protein 254369..255535 Bifidobacterium adolescentis ATCC 15703 4556044 YP_909051.1 CDS BAD_0188 NC_008618.1 255537 256451 D COG family: ABC-type spermidine_putrescinetransport system_ permease component I; Orthologue of BL0343; ABC transporter permease 255537..256451 Bifidobacterium adolescentis ATCC 15703 4556045 YP_909052.1 CDS BAD_0189 NC_008618.1 256499 257356 D COG family: ABC-type spermidine_putrescinetransport system_ permease component II; Orthologue of BL0342; ABC transporter permease 256499..257356 Bifidobacterium adolescentis ATCC 15703 4556046 YP_909053.1 CDS msiK NC_008618.1 257353 258540 D COG family: ABC- typesugar_spermidine_putrescine_iron_thiamine transportsystems_ ATPase component; Orthologue of BL0341; PFAM_ID: ABC_tran; ABC transporter ATP-binding protein 257353..258540 Bifidobacterium adolescentis ATCC 15703 4556424 YP_909054.1 CDS BAD_0191 NC_008618.1 258736 259854 D COG family: predicted metal-dependent membraneprotease; Orthologue of BL0340; PFAM_ID: Abi; hypothetical protein 258736..259854 Bifidobacterium adolescentis ATCC 15703 4556047 YP_909055.1 CDS BAD_0192 NC_008618.1 259963 260748 R COG family: small-conductance mechanosensitivechannel; Orthologue of BL0339; PFAM_ID: MS_channel; hypothetical protein complement(259963..260748) Bifidobacterium adolescentis ATCC 15703 4556048 YP_909056.1 CDS BAD_0193 NC_008618.1 260880 262085 D Orthologue of BL0787; hypothetical protein 260880..262085 Bifidobacterium adolescentis ATCC 15703 4556049 YP_909057.1 CDS BAD_0194 NC_008618.1 262422 263630 D Orthologue of BL0336; hypothetical protein 262422..263630 Bifidobacterium adolescentis ATCC 15703 4556050 YP_909058.1 CDS BAD_0195 NC_008618.1 263786 264463 D COG family: transcriptional regulator; Orthologue of BL0337; PFAM_ID:tetR; hypothetical protein 263786..264463 Bifidobacterium adolescentis ATCC 15703 4556051 YP_909059.1 CDS BAD_0196 NC_008618.1 264568 265758 D catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 264568..265758 Bifidobacterium adolescentis ATCC 15703 4556052 YP_909060.1 CDS BAD_0197 NC_008618.1 266073 266966 R similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate; 6-phosphogluconate dehydrogenase complement(266073..266966) Bifidobacterium adolescentis ATCC 15703 4556053 YP_909061.1 CDS BAD_0198 NC_008618.1 267153 268481 R Orthologue of PPA0738; gluconate permease complement(267153..268481) Bifidobacterium adolescentis ATCC 15703 4556054 YP_909062.1 CDS BAD_0199 NC_008618.1 268564 269100 R Orthologue of SCO1679; putative gluconokinase complement(268564..269100) Bifidobacterium adolescentis ATCC 15703 4556055 YP_909063.1 CDS BAD_0200 NC_008618.1 269371 270090 D Orthologue of CE2422; putative transcription factor 269371..270090 Bifidobacterium adolescentis ATCC 15703 4556056 YP_909064.1 CDS BAD_0201 NC_008618.1 270134 270925 R Best Blastp Hit: gb|AAC95491.1| (U73025) unknown[Staphylococcus aureus]; Orthologue of SMU.174c; hypothetical protein complement(270134..270925) Bifidobacterium adolescentis ATCC 15703 4556057 YP_909065.1 CDS BAD_0202 NC_008618.1 271142 272404 R COG family: permeases of the major facilitatorsuperfamily; Orthologue of BL0332; hypothetical protein complement(271142..272404) Bifidobacterium adolescentis ATCC 15703 4556058 YP_909066.1 CDS rpmB NC_008618.1 272820 273014 D required for 70S ribosome assembly; 50S ribosomal protein L28 272820..273014 Bifidobacterium adolescentis ATCC 15703 4556499 YP_909067.1 CDS recG NC_008618.1 273157 275838 D COG family: RecG-like helicases; Orthologue of BL0329; PFAM_ID: helicase_C; PFAM_ID:DEAD; ATP-dependent DNA helicase 273157..275838 Bifidobacterium adolescentis ATCC 15703 4556626 YP_909068.1 CDS BAD_0205 NC_008618.1 275844 276473 D COG family: N6-adenine-specific methylase; Orthologue of BL0328; hypothetical protein 275844..276473 Bifidobacterium adolescentis ATCC 15703 4557583 YP_909069.1 CDS trmD NC_008618.1 276548 277468 R methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase complement(276548..277468) Bifidobacterium adolescentis ATCC 15703 4557660 YP_909070.1 CDS BAD_0207 NC_008618.1 277561 278148 R COG family: RimM protein_ required for 16S rRNAprocessing; Orthologue of BL0307; PFAM_ID: RimM; 16S rRNA-processing protein rimM complement(277561..278148) Bifidobacterium adolescentis ATCC 15703 4557584 YP_909071.1 CDS BAD_0208 NC_008618.1 278170 278403 R COG family: predicted RNA-binding protein (KHdomain); Orthologue of BL0306; hypothetical protein complement(278170..278403) Bifidobacterium adolescentis ATCC 15703 4557585 YP_909072.1 CDS rpsP NC_008618.1 278406 278855 R binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 complement(278406..278855) Bifidobacterium adolescentis ATCC 15703 4557606 YP_909073.1 CDS BAD_0210 NC_008618.1 279222 280256 D Orthologue of BL0304; hypothetical protein 279222..280256 Bifidobacterium adolescentis ATCC 15703 4557586 YP_909074.1 CDS ffh NC_008618.1 280400 282049 R Identified by sequence similarity; Orthologue of Lxx14950_BL0303; signal recognition particle protein complement(280400..282049) Bifidobacterium adolescentis ATCC 15703 4556965 YP_909075.1 CDS cysS NC_008618.1 282105 283736 R catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase complement(282105..283736) Bifidobacterium adolescentis ATCC 15703 4556238 YP_909076.1 CDS BAD_0213 NC_008618.1 283872 284600 D COG family: GMP synthase - glutamineamidotransferase domain; Orthologue of BL0300; PFAM_ID: GATase; amidotransferase 283872..284600 Bifidobacterium adolescentis ATCC 15703 4557587 YP_909077.1 CDS BAD_0214 NC_008618.1 284912 287068 D COG family: ATPase components of ABC transporterswith duplicated ATPase domains; Orthologue of BL0299; PFAM_ID: ABC_tran; ABC transporter ATP-binding protein 284912..287068 Bifidobacterium adolescentis ATCC 15703 4557588 YP_909078.1 CDS BAD_0215 NC_008618.1 287356 287994 D Orthologue of STH1505; hypothetical protein 287356..287994 Bifidobacterium adolescentis ATCC 15703 4557589 YP_909079.1 CDS BAD_0216 NC_008618.1 288010 289137 R Orthologue of MAP4318c; hypothetical protein complement(288010..289137) Bifidobacterium adolescentis ATCC 15703 4557590 YP_909080.1 CDS BAD_0217 NC_008618.1 289140 289769 R Orthologue of CP000255.1; response regulator complement(289140..289769) Bifidobacterium adolescentis ATCC 15703 4557591 YP_909081.1 CDS BAD_0218 NC_008618.1 289936 290547 D Orthologue of SAV6161; transcription regulator ArsR 289936..290547 Bifidobacterium adolescentis ATCC 15703 4557592 YP_909082.1 CDS BAD_0219 NC_008618.1 290625 291896 D COG family: permeases of the major facilitatorsuperfamily; Orthologue of BL0759; hypothetical protein 290625..291896 Bifidobacterium adolescentis ATCC 15703 4557593 YP_909083.1 CDS ilvH NC_008618.1 291973 292527 R with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit complement(291973..292527) Bifidobacterium adolescentis ATCC 15703 4556217 YP_909084.1 CDS ilvB1 NC_008618.1 292560 294422 R acetolactate synthase large subunit; catalyzes the formation of 2-acetolactate from pyruvate; acetolactate synthase 1 catalytic subunit complement(292560..294422) Bifidobacterium adolescentis ATCC 15703 4556193 YP_909085.1 CDS rnc NC_008618.1 294724 295512 R cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III complement(294724..295512) Bifidobacterium adolescentis ATCC 15703 4556664 YP_909086.1 CDS BAD_0223 NC_008618.1 295509 295640 R Orthologue of nfa46680; putative serine-threonine protein kinase complement(295509..295640) Bifidobacterium adolescentis ATCC 15703 4557594 YP_909087.1 CDS rpmF NC_008618.1 295864 296058 R some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 complement(295864..296058) Bifidobacterium adolescentis ATCC 15703 4556503 YP_909088.1 CDS BAD_0225 NC_008618.1 296154 296768 R COG family: predicted metal-binding_ possiblynucleic acid-binding protein; Orthologue of BL0293; PFAM_ID: DUF177; hypothetical protein complement(296154..296768) Bifidobacterium adolescentis ATCC 15703 4557595 YP_909089.1 CDS BAD_0226 NC_008618.1 296824 297654 R Orthologue of BL0292; hypothetical protein complement(296824..297654) Bifidobacterium adolescentis ATCC 15703 4557596 YP_909090.1 CDS BAD_0227 NC_008618.1 298301 298618 D Orthologue of Tfu_2388; hypothetical protein 298301..298618 Bifidobacterium adolescentis ATCC 15703 4557597 YP_909091.1 CDS BAD_0228 NC_008618.1 298805 300202 R catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase complement(298805..300202) Bifidobacterium adolescentis ATCC 15703 4557598 YP_909092.1 CDS BAD_0229 NC_008618.1 300207 300995 R Identified by Glimmer2; putative; Orthologue of BURPS1710b_1866; hypothetical protein complement(300207..300995) Bifidobacterium adolescentis ATCC 15703 4557599 YP_909093.1 CDS BAD_0230 NC_008618.1 302286 303293 D COG family: predicted permeases; Orthologue of BL0281; hypothetical protein 302286..303293 Bifidobacterium adolescentis ATCC 15703 4557600 YP_909094.1 CDS pgi NC_008618.1 303566 305335 D functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 303566..305335 Bifidobacterium adolescentis ATCC 15703 4556562 YP_909095.1 CDS rplS NC_008618.1 305697 306098 D this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 305697..306098 Bifidobacterium adolescentis ATCC 15703 4557601 YP_909096.1 CDS BAD_0233 NC_008618.1 306165 306539 D Identified by Glimmer2; putative; Orthologue of BURPS1710b_3413; hypothetical protein 306165..306539 Bifidobacterium adolescentis ATCC 15703 4557602 YP_909097.1 CDS rnhB NC_008618.1 306786 307580 D RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 306786..307580 Bifidobacterium adolescentis ATCC 15703 4556901 YP_909098.1 CDS BAD_0235 NC_008618.1 307709 308434 D COG family: ABC-type transport systems_ involved inlipoprotein release_ ATPase components; Orthologue of BL0932_BL1277; PFAM_ID: ABC_tran; ABC transporter ATP-binding protein 307709..308434 Bifidobacterium adolescentis ATCC 15703 4556902 YP_909099.1 CDS BAD_0236 NC_008618.1 308431 309936 D Orthologue of BL1278; hypothetical protein 308431..309936 Bifidobacterium adolescentis ATCC 15703 4556903 YP_909100.1 CDS BAD_0237 NC_008618.1 309984 310928 R COG family: predicted permeases; Orthologue of BL1279; hypothetical protein complement(309984..310928) Bifidobacterium adolescentis ATCC 15703 4556904 YP_909101.1 CDS dapE NC_008618.1 311057 312262 D catalyzes the formation of succinate and diaminoheptanedioate from succinyldiaminoheptanedioate; succinyl-diaminopimelate desuccinylase 311057..312262 Bifidobacterium adolescentis ATCC 15703 4556242 YP_909102.1 CDS BAD_0239 NC_008618.1 312697 315510 D Orthologue of SCO2599_BL1281; SCC88.10c_ hypothetical protein;N-terminal region similar to TR:P71905; ribonuclease G 312697..315510 Bifidobacterium adolescentis ATCC 15703 4556905 YP_909103.1 CDS rplU NC_008618.1 315655 315963 D COG family: ribosomal protein L21; Orthologue of BL1282; PFAM_ID:Ribosomal_L21p; 50S ribosomal protein L21 315655..315963 Bifidobacterium adolescentis ATCC 15703 4556493 YP_909104.1 CDS rpmA NC_008618.1 316003 316254 D involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 316003..316254 Bifidobacterium adolescentis ATCC 15703 4556498 YP_909105.1 CDS obgE NC_008618.1 316331 318022 D essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 316331..318022 Bifidobacterium adolescentis ATCC 15703 4556335 YP_909106.1 CDS proB NC_008618.1 318105 319238 D catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 318105..319238 Bifidobacterium adolescentis ATCC 15703 4556587 YP_909107.1 CDS aspC NC_008618.1 319362 320570 D catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 319362..320570 Bifidobacterium adolescentis ATCC 15703 4557691 YP_909108.1 CDS secE NC_008618.1 320936 321163 D forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 320936..321163 Bifidobacterium adolescentis ATCC 15703 4556708 YP_909109.1 CDS nusG NC_008618.1 321188 322012 D COG family: transcription antiterminator; Orthologue of BL1288; PFAM_ID: NusG; transcription antitermination protein nusG 321188..322012 Bifidobacterium adolescentis ATCC 15703 4556334 YP_909110.1 CDS rplK NC_008618.1 322357 322788 D binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 322357..322788 Bifidobacterium adolescentis ATCC 15703 4556678 YP_909111.1 CDS rplA NC_008618.1 322803 323495 D in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 322803..323495 Bifidobacterium adolescentis ATCC 15703 4556670 YP_909112.1 CDS BAD_0249 NC_008618.1 323643 324422 R COG family: regulator of polyketide synthaseexpression; Orthologue of BL1531; hypothetical protein complement(323643..324422) Bifidobacterium adolescentis ATCC 15703 4556906 YP_909113.1 CDS BAD_0250 NC_008618.1 324506 326611 D Orthologue of BL1532; hypothetical protein 324506..326611 Bifidobacterium adolescentis ATCC 15703 4556907 YP_909114.1 CDS BAD_0251 NC_008618.1 326683 327633 D COG family: biotin-(acetyl-CoA carboxylase) ligase; Orthologue of BL1533; PFAM_ID: BPL_LipA_LipB; hypothetical protein 326683..327633 Bifidobacterium adolescentis ATCC 15703 4556908 YP_909115.1 CDS xerD NC_008618.1 327691 327972 R Orthologue of Reut_A0577; Site-specific tyrosine recombinase_ which acts by catalyzing the cutting and rejoining of the recombining DNA molecules.; tyrosine recombinase XerD complement(327691..327972) Bifidobacterium adolescentis ATCC 15703 4556755 YP_909116.1 CDS BAD_0253 NC_008618.1 328048 328641 R COG family: uncharacterized Acr; Orthologue of BL1534; PFAM_ID: BioY; hypothetical protein complement(328048..328641) Bifidobacterium adolescentis ATCC 15703 4556909 YP_909117.1 CDS BAD_0254 NC_008618.1 328837 330741 D COG family: biotin carboxylase; Orthologue of BL1535; JadJ 328837..330741 Bifidobacterium adolescentis ATCC 15703 4556910 YP_909118.1 CDS pccB NC_008618.1 330738 332384 D COGfamily: acetyl-CoA carboxylase alpha subunit; Orthologue of BL1536; Propanoyl-CoA:carbon dioxide ligase; propionyl-CoA carboxylase subunit beta 330738..332384 Bifidobacterium adolescentis ATCC 15703 4556546 YP_909119.1 CDS fas NC_008618.1 332459 341794 D Orthologue of Rv2524c_BL1537; Probable fas_ Fatty Acid Synthase (EC 2.3.1.-); fatty acid synthase Fas 332459..341794 Bifidobacterium adolescentis ATCC 15703 4556962 YP_909120.1 CDS BAD_0257 NC_008618.1 341953 342411 D COG family: phosphopantetheinyltransferase (holo-acp synthase); Holo-acp synthase; Orthologue of BL1538; putative holo-[acyl-carrier protein] synthase 341953..342411 Bifidobacterium adolescentis ATCC 15703 4556911 YP_909121.1 CDS BAD_0258 NC_008618.1 342720 343397 D Orthologue of BL1545; hypothetical protein 342720..343397 Bifidobacterium adolescentis ATCC 15703 4556912 YP_909122.1 CDS rpsO NC_008618.1 343552 343821 D primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 343552..343821 Bifidobacterium adolescentis ATCC 15703 4557605 YP_909123.1 CDS pnpA NC_008618.1 344051 346729 D Orthologue of Rv2783c_BL1546; Probable gpsI_polyribonucleotide nucleotidyltransferase (EC 2.7.7.8;2.7.6.-); polynucleotide phosphorylase/polyadenylase 344051..346729 Bifidobacterium adolescentis ATCC 15703 4556537 YP_909124.1 CDS lemA NC_008618.1 347032 347592 D COG family: uncharacterized Acr; Orthologue of BL0311; LemA-like protein 347032..347592 Bifidobacterium adolescentis ATCC 15703 4556276 YP_909125.1 CDS BAD_0262 NC_008618.1 347731 349953 D Orthologue of BL0310; hypothetical protein 347731..349953 Bifidobacterium adolescentis ATCC 15703 4556913 YP_909126.1 CDS BAD_0263 NC_008618.1 350021 352213 D Orthologue of BL0310; hypothetical protein 350021..352213 Bifidobacterium adolescentis ATCC 15703 4556914 YP_909127.1 CDS BAD_0264 NC_008618.1 352451 353314 D COG family: predicted oxidoreductases (related toaryl-alcohol dehydrogenases); Orthologue of BL0309; oxidoreductase 352451..353314 Bifidobacterium adolescentis ATCC 15703 4556915 YP_909128.1 CDS BAD_0265 NC_008618.1 353416 354093 R Orthologue of FN1861; L-lysine permease complement(353416..354093) Bifidobacterium adolescentis ATCC 15703 4556916 YP_909129.1 CDS yisV NC_008618.1 354368 355879 D GntR family transcriptional regulator 354368..355879 Bifidobacterium adolescentis ATCC 15703 4556773 YP_909130.1 CDS BAD_0267 NC_008618.1 355898 357559 D COG family: collagenase and related proteases; Orthologue of BL0326; PFAM_ID: Peptidase_U32; protease 355898..357559 Bifidobacterium adolescentis ATCC 15703 4556917 YP_909131.1 CDS BAD_0268 NC_008618.1 357614 358645 D COG family: uncharacterized Acr; Orthologue of BL0325; PFAM_ID: DUF152; hypothetical protein 357614..358645 Bifidobacterium adolescentis ATCC 15703 4556918 YP_909132.1 CDS ispD NC_008618.1 358689 359603 D 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; COGfamily: 4-diphosphocytidyl-2-methyl-D- erithritol synthase; Orthologue of BL0324; PFAM_ID: UPF0007; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 358689..359603 Bifidobacterium adolescentis ATCC 15703 4556223 YP_909133.1 CDS pcp NC_008618.1 359671 360366 D 5-oxoprolyl-peptidase; COG family: pyrrolidone-carboxylatepeptidase (N-terminal pyroglutamyl peptidase); Orthologue of BL0323; PFAM_ID:Peptidase_C15; Pyroglutamyl-peptidase I; pyrrolidone-carboxylate peptidase 359671..360366 Bifidobacterium adolescentis ATCC 15703 4556548 YP_909134.1 CDS BAD_0271 NC_008618.1 360601 362034 D COG family: methyl-accepting chemotaxis protein; Orthologue of BL0322; hypothetical protein 360601..362034 Bifidobacterium adolescentis ATCC 15703 4556919 YP_909135.1 CDS pepC2 NC_008618.1 362057 363394 D COG family: aminopeptidase C; Orthologue of BL0321; PFAM_ID:Pept_C1-like; aminopeptidase C 362057..363394 Bifidobacterium adolescentis ATCC 15703 4556553 YP_909136.1 CDS aroG2 NC_008618.1 363824 364957 D catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 363824..364957 Bifidobacterium adolescentis ATCC 15703 4557681 YP_909137.1 CDS aroG NC_008618.1 365015 366199 D catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, tyrosine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 365015..366199 Bifidobacterium adolescentis ATCC 15703 4557406 YP_909138.1 CDS pfs NC_008618.1 366303 367010 D COG family: nucleoside phosphorylase; Orthologue of BL0318; PFAM_ID:PNP_UDP_1; 5'-methylthioadenosine nucleosidase 366303..367010 Bifidobacterium adolescentis ATCC 15703 4556561 YP_909139.1 CDS BAD_0276 NC_008618.1 367254 368663 D COG family: sensory transduction histidine kinases; Orthologue of BL0317; PFAM_ID: HATPase_c; PFAM_ID: signal; sensor protein 367254..368663 Bifidobacterium adolescentis ATCC 15703 4556979 YP_909140.1 CDS BAD_0277 NC_008618.1 368660 369367 D COG family: response regulators consisting of aCheY-like receiver domain and a HTH DNA-binding domain; Orthologue of BL0316; PFAM_ID: response_reg; PFAM_ID: trans_reg_C; response regulator of two-component system 368660..369367 Bifidobacterium adolescentis ATCC 15703 4556980 YP_909141.1 CDS pstS NC_008618.1 369534 370730 D COG family: ABC-type phosphate transportsystem_ periplasmic component; Orthologue of BL0315; PFAM_ID: PstS; phosphate-binding transport protein of ABC transporter system 369534..370730 Bifidobacterium adolescentis ATCC 15703 4556679 YP_909142.1 CDS pstC NC_008618.1 370893 371846 D COG family: ABC-type phosphate transportsystem_ permease component; Orthologue of BL0314; PFAM_ID: BPD_transp; phosphate ABC transporter permease 370893..371846 Bifidobacterium adolescentis ATCC 15703 4556598 YP_909143.1 CDS pstA NC_008618.1 371843 372841 D COG family: ABC-type phosphate transportsystem_ permease component; Orthologue of BL0313; PFAM_ID: BPD_transp; phosphate ABC transporter substrate-binding protein 371843..372841 Bifidobacterium adolescentis ATCC 15703 4556596 YP_909144.1 CDS pstB NC_008618.1 372886 373665 D ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein 372886..373665 Bifidobacterium adolescentis ATCC 15703 4556597 YP_909145.1 CDS BAD_0282 NC_008618.1 373897 374838 D COG family: ABC-type Mn_Zn transport system_periplasmic Mn_Zn-binding (lipo)protein (surface adhesina); Orthologue of BL1126; PFAM_ID: Lipoprotein_4; ABC transporter substrate-binding protein 373897..374838 Bifidobacterium adolescentis ATCC 15703 4556981 YP_909146.1 CDS BAD_0283 NC_008618.1 374928 376430 R COG family: permeases; Orthologue of BL1547; PFAM_ID: xan_ur_permease; hypothetical protein complement(374928..376430) Bifidobacterium adolescentis ATCC 15703 4556982 YP_909147.1 CDS rplJ NC_008618.1 376738 377259 D binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 376738..377259 Bifidobacterium adolescentis ATCC 15703 4556677 YP_909148.1 CDS rplL NC_008618.1 377373 377753 D present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 377373..377753 Bifidobacterium adolescentis ATCC 15703 4556486 YP_909149.1 CDS BAD_0286 NC_008618.1 377968 379473 D Orthologue of BL1551; hypothetical protein 377968..379473 Bifidobacterium adolescentis ATCC 15703 4556983 YP_909150.1 CDS BAD_0287 NC_008618.1 379470 383102 D COG family: superfamily I DNA and RNA helicases andhelicase subunits; Orthologue of BL1552; hypothetical protein 379470..383102 Bifidobacterium adolescentis ATCC 15703 4556984 YP_909151.1 CDS BAD_0288 NC_008618.1 383415 384215 R Orthologue of BL1553; hypothetical protein complement(383415..384215) Bifidobacterium adolescentis ATCC 15703 4556985 YP_909152.1 CDS BAD_0289 NC_008618.1 384596 385216 R COG family: 5-formyltetrahydrofolate cyclo-ligase; Orthologue of BL1555; PFAM_ID: 5-FTHF_cyc-lig; hypothetical protein complement(384596..385216) Bifidobacterium adolescentis ATCC 15703 4556986 YP_909153.1 CDS BAD_0290 NC_008618.1 385375 385953 D COG family: acetyltransferases_ includingN-acetylases of ribosomal proteins; Orthologue of BL1556; PFAM_ID: Acetyltransf; acetytransferase 385375..385953 Bifidobacterium adolescentis ATCC 15703 4556987 YP_909154.1 CDS BAD_0291 NC_008618.1 386013 387209 D Orthologue of BL1557; hypothetical protein 386013..387209 Bifidobacterium adolescentis ATCC 15703 4556988 YP_909155.1 CDS groES NC_008618.1 387432 387725 D 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 387432..387725 Bifidobacterium adolescentis ATCC 15703 4556140 YP_909156.1 CDS rpmG NC_008618.1 388234 388404 D in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group have the CXXC motif; 50S ribosomal protein L33 388234..388404 Bifidobacterium adolescentis ATCC 15703 4556504 YP_909157.1 CDS murB NC_008618.1 388595 389665 D Orthologue of BL1561; PFAM_ID: MurB; UDP-N-acetylmuramate dehydrogenase; MurB; COGfamily: UDP-N-acetylmuramate dehydrogenase; UDP-N-acetylenolpyruvoylglucosamine reductase 388595..389665 Bifidobacterium adolescentis ATCC 15703 4556372 YP_909158.1 CDS BAD_0295 NC_008618.1 389726 391270 D COG family: amino acid transporters; Orthologue of BL1562; PFAM_ID:aa_permeases; cationic amino acid transporter 389726..391270 Bifidobacterium adolescentis ATCC 15703 4556989 YP_909159.1 CDS fdxC NC_008618.1 391307 391627 D COG family: ferredoxin 3; Orthologue of BL1563; PFAM_ID: fer4; ferredoxin 391307..391627 Bifidobacterium adolescentis ATCC 15703 4556964 YP_909160.1 CDS BAD_0297 NC_008618.1 391828 392976 D catalyzes the formation of N-succinyl-LL-2,6-diaminopimelate from N-succinyl-L-2-amino-6-oxopimelate in lysine biosynthesis; N-succinyldiaminopimelate aminotransferase 391828..392976 Bifidobacterium adolescentis ATCC 15703 4556990 YP_909161.1 CDS BAD_0298 NC_008618.1 393161 393760 R Identified by Glimmer2; putative; Orthologue of CPS_1689; hypothetical protein complement(393161..393760) Bifidobacterium adolescentis ATCC 15703 4556991 YP_909162.1 CDS BAD_0299 NC_008618.1 393958 396000 D Orthologue of BF2899; Very low similarity to the C-terminal region ofCytophaga xylanolytica ArfI; putative outer membrane protein 393958..396000 Bifidobacterium adolescentis ATCC 15703 4556992 YP_909163.1 CDS BAD_0300 NC_008618.1 396002 397141 D Orthologue of BH2105; xylanase Y 396002..397141 Bifidobacterium adolescentis ATCC 15703 4556993 YP_909164.1 CDS BAD_0301 NC_008618.1 397141 398727 D Orthologue of BF0575_BH2105; Similar to Caldocellum saccharolyticum xylanaseXynF; pyridine nucleotide-disulfide oxidoreductase 397141..398727 Bifidobacterium adolescentis ATCC 15703 4556994 YP_909165.1 CDS BAD_0302 NC_008618.1 398724 400175 D ORF_ID:slr8023probable esterase; Orthologue of slr8023; esterase 398724..400175 Bifidobacterium adolescentis ATCC 15703 4556995 YP_909166.1 CDS BAD_0303 NC_008618.1 400971 402386 D COG family: nucleotidyltransferase_DNA polymeraseinvolved in DNA repair; Orthologue of BL1565; PFAM_ID: IMS; DNA-damage-inducible protein P 400971..402386 Bifidobacterium adolescentis ATCC 15703 4556996 YP_909167.1 CDS BAD_0304 NC_008618.1 402392 403792 D COG family: putative enzyme of poly-gamma-glutamatebiosynthesis (capsule formation); Orthologue of BL1567; hypothetical protein 402392..403792 Bifidobacterium adolescentis ATCC 15703 4556997 YP_909168.1 CDS BAD_0305 NC_008618.1 403871 404860 D COG family: phosphoglycerate dehydrogenase andrelated dehydrogenases; Orthologue of BL1568; PFAM_ID: 2-Hacid_DH_C; 2-hydroxyacid dehydrogenase 403871..404860 Bifidobacterium adolescentis ATCC 15703 4556998 YP_909169.1 CDS BAD_0306 NC_008618.1 404920 405558 D COG family: uncharacterized Acr; Orthologue of BL1569; PFAM_ID: UPF0029; hypothetical protein 404920..405558 Bifidobacterium adolescentis ATCC 15703 4557348 YP_909170.1 CDS BAD_0307 NC_008618.1 405604 406266 D Ccontains a conserved domain in cyanobacteria. Samedomain in Pro0575_ Pro0618_ Pro01459; Orthologue of Pro0615; AbrB family transcriptional regulator 405604..406266 Bifidobacterium adolescentis ATCC 15703 4557349 YP_909171.1 CDS malQ1 NC_008618.1 406327 408498 D Amylomaltase; COG family:4-alpha-glucanotransferase; Orthologue of BL1570; PFAM_ID: 4A_glucanotrans; 4-alpha-glucanotransferase 406327..408498 Bifidobacterium adolescentis ATCC 15703 4556363 YP_909172.1 CDS rplM NC_008618.1 408770 409219 D in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 408770..409219 Bifidobacterium adolescentis ATCC 15703 4557350 YP_909173.1 CDS rpsI NC_008618.1 409240 409731 D forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 409240..409731 Bifidobacterium adolescentis ATCC 15703 4556655 YP_909174.1 CDS BAD_0311 NC_008618.1 409824 411839 R COG family: pullulanase and related glycosidases; Orthologue of BL1573; PFAM_ID: alpha-amylase; PFAM_ID: isoamylase_N; glycogen operon protein GlgX complement(409824..411839) Bifidobacterium adolescentis ATCC 15703 4557351 YP_909175.1 CDS BAD_0312 NC_008618.1 411915 412271 R hypothetical protein complement(411915..412271) Bifidobacterium adolescentis ATCC 15703 4557352 YP_909176.1 CDS BAD_0313 NC_008618.1 412571 413575 D Orthologue of SCO1901; Probable zinc-binding dehydrogenase; zinc-binding dehydrogenase 412571..413575 Bifidobacterium adolescentis ATCC 15703 4557353 YP_909177.1 CDS ywbC NC_008618.1 413861 414349 D Orthologue of BLi04061; hypothetical protein 413861..414349 Bifidobacterium adolescentis ATCC 15703 4556779 YP_909178.1 CDS BAD_0315 NC_008618.1 414511 415641 R COG family: transcriptional regulators; Orthologue of BL1574; PFAM_ID:ROK; Rok family repressor complement(414511..415641) Bifidobacterium adolescentis ATCC 15703 4557354 YP_909179.1 CDS rbtT NC_008618.1 415824 417128 D Orthologue of SH0209; Ribitol transporter homolog; hypothetical protein 415824..417128 Bifidobacterium adolescentis ATCC 15703 4556622 YP_909180.1 CDS BAD_0317 NC_008618.1 417135 418241 D Orthologue of mlr4915; xylitol (sorbitol) dehydrogenase 417135..418241 Bifidobacterium adolescentis ATCC 15703 4557355 YP_909181.1 CDS BAD_0318 NC_008618.1 418281 419252 D AraC family; Identified by match to protein family HMM PF00165; Orthologue of PSPPH_4841; transcriptional regulator 418281..419252 Bifidobacterium adolescentis ATCC 15703 4557356 YP_909182.1 CDS BAD_0319 NC_008618.1 419606 422338 D Acetaldehyde dehydrogenase; Orthologue of ECs1741; Similar to ADHE_ECOLI gi|1787493 (conserved in Escherichia coli K-12); bifunctional acetaldehyde-CoA/alcohol dehydrogenase 419606..422338 Bifidobacterium adolescentis ATCC 15703 4557357 YP_909183.1 CDS rpsJ NC_008618.1 422798 423106 D NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 422798..423106 Bifidobacterium adolescentis ATCC 15703 4556656 YP_909184.1 CDS rplC NC_008618.1 423124 423765 D binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 423124..423765 Bifidobacterium adolescentis ATCC 15703 4556672 YP_909185.1 CDS rplD NC_008618.1 423772 424437 D L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 423772..424437 Bifidobacterium adolescentis ATCC 15703 4556673 YP_909186.1 CDS rplW NC_008618.1 424434 424739 D binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 424434..424739 Bifidobacterium adolescentis ATCC 15703 4556495 YP_909187.1 CDS rplB NC_008618.1 424776 425606 D one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 424776..425606 Bifidobacterium adolescentis ATCC 15703 4556671 YP_909188.1 CDS rpsS NC_008618.1 425622 425900 D protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 425622..425900 Bifidobacterium adolescentis ATCC 15703 4557609 YP_909189.1 CDS rplV NC_008618.1 425917 426276 D binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 425917..426276 Bifidobacterium adolescentis ATCC 15703 4556494 YP_909190.1 CDS rpsC NC_008618.1 426279 427082 D forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 426279..427082 Bifidobacterium adolescentis ATCC 15703 4556649 YP_909191.1 CDS rplP NC_008618.1 427090 427509 D located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 427090..427509 Bifidobacterium adolescentis ATCC 15703 4556489 YP_909192.1 CDS rpmC NC_008618.1 427509 427766 D COG family: ribosomal protein L29; Orthologue of BL1587; PFAM_ID: Ribosomal_L29; 50S ribosomal protein L29 427509..427766 Bifidobacterium adolescentis ATCC 15703 4556500 YP_909193.1 CDS rpsQ NC_008618.1 427766 428026 D primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 427766..428026 Bifidobacterium adolescentis ATCC 15703 4557607 YP_909194.1 CDS rplN NC_008618.1 428118 428486 D binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 428118..428486 Bifidobacterium adolescentis ATCC 15703 4556487 YP_909195.1 CDS rplX NC_008618.1 428488 428823 D assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 428488..428823 Bifidobacterium adolescentis ATCC 15703 4556496 YP_909196.1 CDS rplE NC_008618.1 428820 429392 D part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 428820..429392 Bifidobacterium adolescentis ATCC 15703 4556674 YP_909197.1 CDS rpsN NC_008618.1 429394 429579 D located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif; 30S ribosomal protein S14 429394..429579 Bifidobacterium adolescentis ATCC 15703 4557604 YP_909198.1 CDS rpsH NC_008618.1 429664 430062 D binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 429664..430062 Bifidobacterium adolescentis ATCC 15703 4556654 YP_909199.1 CDS rplF NC_008618.1 430080 430619 D ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 430080..430619 Bifidobacterium adolescentis ATCC 15703 4556675 YP_909200.1 CDS rplR NC_008618.1 430619 430990 D binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 430619..430990 Bifidobacterium adolescentis ATCC 15703 4556491 YP_909201.1 CDS rpsE NC_008618.1 430987 431712 D located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 430987..431712 Bifidobacterium adolescentis ATCC 15703 4556651 YP_909202.1 CDS rpmD NC_008618.1 431709 431894 D L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 431709..431894 Bifidobacterium adolescentis ATCC 15703 4556501 YP_909203.1 CDS rplO NC_008618.1 431897 432343 D late assembly protein; 50S ribosomal protein L15 431897..432343 Bifidobacterium adolescentis ATCC 15703 4556488 YP_909204.1 CDS secY NC_008618.1 432536 433909 D forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 432536..433909 Bifidobacterium adolescentis ATCC 15703 4556710 YP_909205.1 CDS adk NC_008618.1 434027 434587 D essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 434027..434587 Bifidobacterium adolescentis ATCC 15703 4557196 YP_909206.1 CDS infA NC_008618.1 434735 434953 D stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 434735..434953 Bifidobacterium adolescentis ATCC 15703 4556218 YP_909207.1 CDS rpmJ NC_008618.1 434977 435090 D smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 434977..435090 Bifidobacterium adolescentis ATCC 15703 4556641 YP_909208.2 CDS rpsM NC_008618.1 435227 435604 D located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 435227..435604 Bifidobacterium adolescentis ATCC 15703 4557603 YP_909209.1 CDS rpsK NC_008618.1 435689 436087 D located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 435689..436087 Bifidobacterium adolescentis ATCC 15703 4556657 YP_909210.1 CDS rpoA NC_008618.1 436132 437166 D catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 436132..437166 Bifidobacterium adolescentis ATCC 15703 4556642 YP_909211.1 CDS rplQ NC_008618.1 437255 437722 D is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 437255..437722 Bifidobacterium adolescentis ATCC 15703 4556490 YP_909212.1 CDS truA NC_008618.1 437829 438749 D COG family: pseudouridylatesynthase (tRNA psi55); Orthologue of BL1608; PFAM_ID: PseudoU_synth_1; Pseudouridylate synthase I; Uuracil hydrolyase; tRNA pseudouridine synthase A 437829..438749 Bifidobacterium adolescentis ATCC 15703 4556726 YP_909213.1 CDS BAD_0350 NC_008618.1 438926 441106 D COG family: uncharacterized Bcr; Orthologue of BL1609; hypothetical protein 438926..441106 Bifidobacterium adolescentis ATCC 15703 4557358 YP_909214.1 CDS BAD_0351 NC_008618.1 441211 442011 D COG family: transglutaminase-like enzymes_ putativecysteine proteases; Orthologue of BL1610; PFAM_ID: Transglut_core; hypothetical protein 441211..442011 Bifidobacterium adolescentis ATCC 15703 4557359 YP_909215.1 CDS BAD_0352 NC_008618.1 442317 443201 R Orthologue of BL1614; hypothetical protein complement(442317..443201) Bifidobacterium adolescentis ATCC 15703 4557360 YP_909216.1 CDS nusA NC_008618.1 443279 444331 D modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 443279..444331 Bifidobacterium adolescentis ATCC 15703 4556333 YP_909217.1 CDS infB NC_008618.1 444544 447339 D Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 444544..447339 Bifidobacterium adolescentis ATCC 15703 4556219 YP_909218.1 CDS rbfA NC_008618.1 447449 447952 D associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 447449..447952 Bifidobacterium adolescentis ATCC 15703 4556617 YP_909219.1 CDS truB NC_008618.1 447936 449006 D COGfamily: pseudouridine synthase; Orthologue of BL1618; PFAM_ID: TruB_N; Uracil hydrolyase; tRNA pseudouridine synthase B 447936..449006 Bifidobacterium adolescentis ATCC 15703 4556727 YP_909220.1 CDS ribF NC_008618.1 449076 450305 D COGfamily: FAD synthase; Fad pyrophosphorylase; Fad synthetase; Orthologue of BL1619; PFAM_ID: FAD_Synth; riboflavin kinase 449076..450305 Bifidobacterium adolescentis ATCC 15703 4556659 YP_909221.1 CDS radA NC_008618.1 450436 451854 R Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA complement(450436..451854) Bifidobacterium adolescentis ATCC 15703 4556616 YP_909222.1 CDS BAD_0359 NC_008618.1 451995 452648 D Orthologue of BL1621; hypothetical protein 451995..452648 Bifidobacterium adolescentis ATCC 15703 4557361 YP_909223.1 CDS BAD_0360 NC_008618.1 452697 452873 R Orthologue of BL1622; hypothetical protein complement(452697..452873) Bifidobacterium adolescentis ATCC 15703 4557362 YP_909224.1 CDS BAD_0361 NC_008618.1 453047 453745 R Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A complement(453047..453745) Bifidobacterium adolescentis ATCC 15703 4557363 YP_909225.1 CDS rnh NC_008618.1 453967 455304 R COG family: ribonuclease HI; Orthologue of BL1624; PFAM_ID:RNaseH; ribonuclease H complement(453967..455304) Bifidobacterium adolescentis ATCC 15703 4556666 YP_909226.1 CDS BAD_0363 NC_008618.1 455409 456797 R Orthologue of lin0802; hypothetical protein complement(455409..456797) Bifidobacterium adolescentis ATCC 15703 4557364 YP_909227.1 CDS BAD_0364 NC_008618.1 456799 457560 R Orthologue of OB1641; two-component response regulator complement(456799..457560) Bifidobacterium adolescentis ATCC 15703 4557365 YP_909228.1 CDS pgm NC_008618.1 457830 459602 R catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; phosphoglucomutase complement(457830..459602) Bifidobacterium adolescentis ATCC 15703 4556525 YP_909229.1 CDS ptsG NC_008618.1 459828 461921 D COG family:phosphotransferase system IIb components; Glucose-permease IIABC; Orthologue of BL1632; PFAM_ID: PTS_EIIA_1; PFAM_ID: PTS_EIIC; PFAM_ID:PTS_EIIB; Phosphotransferase enzymeII_ ABC component; glucose-specific II BC component 459828..461921 Bifidobacterium adolescentis ATCC 15703 4556685 YP_909230.1 CDS BAD_0367 NC_008618.1 461923 462801 D Orthologue of BL1633; transcription antiterminator LicT 461923..462801 Bifidobacterium adolescentis ATCC 15703 4557366 YP_909231.1 CDS BAD_0368 NC_008618.1 462856 464049 R COG family: uncharacterized Acr; Orthologue of BL1634; PFAM_ID: DAGKc; hypothetical protein complement(462856..464049) Bifidobacterium adolescentis ATCC 15703 4557426 YP_909232.1 CDS BAD_0369 NC_008618.1 464177 465463 D catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 464177..465463 Bifidobacterium adolescentis ATCC 15703 4557427 YP_909233.1 CDS BAD_0370 NC_008618.1 465863 466543 R COG family: response regulators consisting of aCheY-like receiver domain and a HTH DNA-binding domain; Orthologue of BL1645; PFAM_ID: GerE; PFAM_ID: response_reg; response regulator of two-component system complement(465863..466543) Bifidobacterium adolescentis ATCC 15703 4557428 YP_909234.1 CDS BAD_0371 NC_008618.1 466597 468033 R COG family: sensory transduction histidine kinases; Orthologue of BL1646; histidine kinase sensor of two component system complement(466597..468033) Bifidobacterium adolescentis ATCC 15703 4557429 YP_909235.1 CDS BAD_0372 NC_008618.1 468120 470123 D COG family: putative stress-responsivetranscriptional regulator; Orthologue of BL1647; hypothetical protein 468120..470123 Bifidobacterium adolescentis ATCC 15703 4557430 YP_909236.1 CDS BAD_0373 NC_008618.1 470120 470734 D Orthologue of BL1648; hypothetical protein 470120..470734 Bifidobacterium adolescentis ATCC 15703 4557431 YP_909237.1 CDS BAD_0374 NC_008618.1 470693 472564 R Orthologue of BL1649; hypothetical protein complement(470693..472564) Bifidobacterium adolescentis ATCC 15703 4557432 YP_909238.1 CDS BAD_0375 NC_008618.1 472876 474030 R COG family: arabinose efflux permease; Orthologue of BL1652; PFAM_ID:sugar_tr; AraJ-like protein complement(472876..474030) Bifidobacterium adolescentis ATCC 15703 4557433 YP_909239.1 CDS lysS NC_008618.1 474277 476040 D class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 474277..476040 Bifidobacterium adolescentis ATCC 15703 4556355 YP_909240.1 CDS BAD_0377 NC_008618.1 476095 477291 D COG family: 1_4-dihydroxy-2- naphthoateoctaprenyltransferase; Orthologue of BL1655; PFAM_ID: UbiA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase 476095..477291 Bifidobacterium adolescentis ATCC 15703 4557434 YP_909241.1 CDS gpmA NC_008618.1 477305 478135 D 2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase 477305..478135 Bifidobacterium adolescentis ATCC 15703 4556137 YP_909242.1 CDS BAD_0379 NC_008618.1 478362 480308 R in group A Streptococci this protein was found to cross react with anti myosin antibodies and may play a role in rheumatic fever; myosin-cross-reactive antigen complement(478362..480308) Bifidobacterium adolescentis ATCC 15703 4557435 YP_909243.1 CDS BAD_0380 NC_008618.1 480564 481268 R COG family: phosphate uptake regulator; Orthologue of BL1657; response regulator of two-component system complement(480564..481268) Bifidobacterium adolescentis ATCC 15703 4557436 YP_909244.1 CDS BAD_0381 NC_008618.1 481357 482616 D COG family: sensory transduction histidine kinases; Orthologue of BL1658; PFAM_ID: HATPase_c; sensor protein 481357..482616 Bifidobacterium adolescentis ATCC 15703 4557437 YP_909245.1 CDS BAD_0382 NC_008618.1 482737 482991 R Orthologue of BL1659; hypothetical protein complement(482737..482991) Bifidobacterium adolescentis ATCC 15703 4557438 YP_909246.1 CDS serC NC_008618.1 483018 484160 R catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; phosphoserine aminotransferase complement(483018..484160) Bifidobacterium adolescentis ATCC 15703 4556713 YP_909247.1 CDS BAD_0384 NC_008618.1 484367 485299 D Orthologue of BL1661; hypothetical protein 484367..485299 Bifidobacterium adolescentis ATCC 15703 4557439 YP_909248.1 CDS BAD_0385 NC_008618.1 485362 486111 D COG family: cell wall-associated hydrolases(invasion-associated proteins); Orthologue of BL1663; PFAM_ID: NLPC_P60; hypothetical protein 485362..486111 Bifidobacterium adolescentis ATCC 15703 4557440 YP_909249.1 CDS BAD_0386 NC_008618.1 486252 487307 D COG family: universal stress protein UspA andrelated nucleotide-binding proteins; Orthologue of BL1664; PFAM_ID: Usp; universal stress family protein 486252..487307 Bifidobacterium adolescentis ATCC 15703 4557441 YP_909250.1 CDS BAD_0387 NC_008618.1 487411 487824 R Orthologue of BL1664a; hypothetical protein complement(487411..487824) Bifidobacterium adolescentis ATCC 15703 4557442 YP_909251.1 CDS thyA NC_008618.1 488153 488953 D ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase 488153..488953 Bifidobacterium adolescentis ATCC 15703 4557649 YP_909252.1 CDS dfrA NC_008618.1 489023 489697 D COG family: dihydrofolate reductase; Orthologue of BL1666; PFAM_ID:DiHfolate_red; dihydrofolate reductase 489023..489697 Bifidobacterium adolescentis ATCC 15703 4556249 YP_909253.1 CDS ptpA NC_008618.1 489704 490207 D COG family:protein-tyrosine-phosphatase; Orthologue of BL1667; PFAM_ID: LMWPc; Small_ acidic phosphotyrosine proteinphosphatase; low molecular weight protein-tyrosine-phosphatase 489704..490207 Bifidobacterium adolescentis ATCC 15703 4556683 YP_909254.1 CDS galE2 NC_008618.1 490866 491936 R COG family: UDP-glucose 4-epimerase; Galactowaldenase; Orthologue of BL1671; PFAM_ID: 3Beta_HSD; PFAM_ID: Epimerase; UDP-galactose 4-epimerase; UDP-glucose 4-epimerase complement(490866..491936) Bifidobacterium adolescentis ATCC 15703 4557241 YP_909255.1 CDS BAD_0392 NC_008618.1 492044 492928 D COG family: predicted S-adenosylmethionine-dependent methyltransferase; Orthologue of BL1670; PFAM_ID:Methyltransf_4; tRNA (guanine-N(7)-)-methyltransferase 492044..492928 Bifidobacterium adolescentis ATCC 15703 4557443 YP_909256.1 CDS BAD_0393 NC_008618.1 493590 495755 D Orthologue of CAC0731; nucleoside-diphosphate-sugar epimerase 493590..495755 Bifidobacterium adolescentis ATCC 15703 4557444 YP_909257.1 CDS BAD_0394 NC_008618.1 495755 496672 D Orthologue of CAC0732; hypothetical protein 495755..496672 Bifidobacterium adolescentis ATCC 15703 4557445 YP_909258.1 CDS BAD_0395 NC_008618.1 496741 498540 D Orthologue of CAC0733; hypothetical protein 496741..498540 Bifidobacterium adolescentis ATCC 15703 4557486 YP_909259.1 CDS BAD_0396 NC_008618.1 498537 499955 D Lipopolysaccharide biosynthesis protein-related protein; Orthologue of CAC0734; glycosyltransferase I 498537..499955 Bifidobacterium adolescentis ATCC 15703 4557487 YP_909260.1 CDS BAD_0397 NC_008618.1 499957 501435 D Orthologue of CAC0735; hypothetical protein 499957..501435 Bifidobacterium adolescentis ATCC 15703 4557488 YP_909261.1 CDS cotH NC_008618.1 501453 503279 D Orthologue of BCZK1852; spore coat protein H 501453..503279 Bifidobacterium adolescentis ATCC 15703 4557572 YP_909262.1 CDS BAD_0399 NC_008618.1 503269 504099 D Orthologue of OB2513; hypothetical protein 503269..504099 Bifidobacterium adolescentis ATCC 15703 4557489 YP_909263.1 CDS vrrB NC_008618.1 504063 504767 R Orthologue of BCZK4489; hypothetical protein complement(504063..504767) Bifidobacterium adolescentis ATCC 15703 4556751 YP_909264.1 CDS BAD_0401 NC_008618.1 504853 505746 R Orthologue of YPTB2321; Similar to Escherichia coli b1706 hypothetical protein; hypothetical protein complement(504853..505746) Bifidobacterium adolescentis ATCC 15703 4557490 YP_909265.1 CDS BAD_0402 NC_008618.1 506242 507114 R Orthologue of BURPS1710b_1550; putative 200 kDa antigen p200 complement(506242..507114) Bifidobacterium adolescentis ATCC 15703 4557491 YP_909266.1 CDS fucO NC_008618.1 507281 508432 D COG family:alcohol dehydrogenase IV; Orthologue of BL1673; PFAM_ID: Fe-ADH; Propanediol oxidoreductase; L-1,2-propanediol oxidoreductase 507281..508432 Bifidobacterium adolescentis ATCC 15703 4557238 YP_909267.1 CDS BAD_0404 NC_008618.1 508564 509490 R COG family: glycosyltransferases involved in cellwall biogenesis; Orthologue of BL1674; PFAM_ID: Glycos_transf_2; glycosyltransferase complement(508564..509490) Bifidobacterium adolescentis ATCC 15703 4557492 YP_909268.1 CDS BAD_0405 NC_008618.1 509545 511068 D COG family: predicted permease; Orthologue of BL1675; PFAM_ID: UPF0118; hypothetical protein 509545..511068 Bifidobacterium adolescentis ATCC 15703 4557493 YP_909269.1 CDS BAD_0406 NC_008618.1 511068 512291 D COG family: glycosyltransferases_ probably involvedin cell wall biogenesis; Orthologue of BL1676; PFAM_ID: Glycos_transf_2; hypothetical protein 511068..512291 Bifidobacterium adolescentis ATCC 15703 4557494 YP_909270.1 CDS BAD_0407 NC_008618.1 512324 513835 D COG family: D-alanyl-D-alanine carboxypeptidase(penicillin-binding protein 4); Orthologue of BL1679; PFAM_ID: Peptidase_S13; hypothetical protein 512324..513835 Bifidobacterium adolescentis ATCC 15703 4557495 YP_909271.1 CDS hprT NC_008618.1 513907 514479 D COG family: hypoxanthine- guaninephosphoribosyltransferase; Orthologue of BL1681; PFAM_ID: Pribosyltran; hypoxanthine-guanine phosphoribosyltransferase 513907..514479 Bifidobacterium adolescentis ATCC 15703 4556180 YP_909272.1 CDS BAD_0409 NC_008618.1 514476 516575 D hypothetical protein 514476..516575 Bifidobacterium adolescentis ATCC 15703 4557496 YP_909273.1 CDS folE NC_008618.1 516575 517210 D involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I 516575..517210 Bifidobacterium adolescentis ATCC 15703 4556974 YP_909274.1 CDS folP NC_008618.1 517258 518157 D COGfamily: dihydropteroate synthase; Dihydropteroate pyrophosphorylase 1; Orthologue of BL1684; PFAM_ID: DHPS; dihydropteroate synthase 1 517258..518157 Bifidobacterium adolescentis ATCC 15703 4556975 YP_909275.1 CDS sulD NC_008618.1 518242 519792 D 7_8-dihydro-6- hydroxymethylpterinpyrophosphokinase; HppK; COG family: dihydroneopterinaldolase; Orthologue of BL1685; PFAM_ID: FolB; PFAM_ID: HPPK; aldolase-pyrophosphokinase 518242..519792 Bifidobacterium adolescentis ATCC 15703 4556457 YP_909276.1 CDS BAD_0413 NC_008618.1 519855 520364 D Orthologue of BL1686; hypothetical protein 519855..520364 Bifidobacterium adolescentis ATCC 15703 4557497 YP_909277.1 CDS tesB NC_008618.1 520390 521295 R COG family: acyl-CoA thioesterase; Orthologue of BL1687; PFAM_ID: Acyl_CoA_thio; Acyl-CoA thioesterase II complement(520390..521295) Bifidobacterium adolescentis ATCC 15703 4556462 YP_909278.1 CDS BAD_0415 NC_008618.1 521520 523175 R ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; putative ABC transporter ATP-binding protein complement(521520..523175) Bifidobacterium adolescentis ATCC 15703 4557498 YP_909279.1 CDS BAD_0416 NC_008618.1 523176 523655 D Orthologue of SCO4877; hypothetical protein 523176..523655 Bifidobacterium adolescentis ATCC 15703 4557499 YP_909280.1 CDS cpxR NC_008618.1 523898 524215 D Escherichia coli ECs4838 transcriptional regulator in 2-component system CpxR; Orthologue of YPTB0070; Similar to Yersinia pestis YPO0074 cpxR; two component system response regulatory protein 523898..524215 Bifidobacterium adolescentis ATCC 15703 4557576 YP_909281.1 CDS ribD NC_008618.1 524261 525214 D Orthologue of SAK_0872; identified by similarity to SP:P17618; riboflavin biosynthesis protein RibD 524261..525214 Bifidobacterium adolescentis ATCC 15703 4556638 YP_909282.1 CDS BAD_0419 NC_008618.1 525381 526928 R COG family: predicted metal-dependent hydrolasewith the TIM-barrel fold; Orthologue of BL0601; hypothetical protein complement(525381..526928) Bifidobacterium adolescentis ATCC 15703 4557500 YP_909283.1 CDS BAD_0420 NC_008618.1 527106 528032 D Orthologue of BL0019; hypothetical protein 527106..528032 Bifidobacterium adolescentis ATCC 15703 4557501 YP_909284.1 CDS BAD_0421 NC_008618.1 528258 529538 R Orthologue of BT1923; O-acetylhomoserine (thiol)-lyase complement(528258..529538) Bifidobacterium adolescentis ATCC 15703 4557502 YP_909285.1 CDS xylA NC_008618.1 529775 531124 D catalyzes the interconversion of D-xylose to D-xylulose; xylose isomerase 529775..531124 Bifidobacterium adolescentis ATCC 15703 4556760 YP_909286.1 CDS BAD_0423 NC_008618.1 531514 533208 D Includes: beta-xylosidase; Orthologue of ABC1148; alpha-L-arabinofuranosidase 531514..533208 Bifidobacterium adolescentis ATCC 15703 4557503 YP_909287.1 CDS BAD_0424 NC_008618.1 533342 534361 R Orthologue of SAV4983; LacI family transcriptional regulator complement(533342..534361) Bifidobacterium adolescentis ATCC 15703 4557504 YP_909288.1 CDS BAD_0425 NC_008618.1 534698 535993 D Orthologue of SAV4979; putative sugar transporter solute-binding protein 534698..535993 Bifidobacterium adolescentis ATCC 15703 4557505 YP_909289.1 CDS BAD_0426 NC_008618.1 536010 537137 D Orthologue of SAV4980; putative binding protein-dependent transporter 536010..537137 Bifidobacterium adolescentis ATCC 15703 4557506 YP_909290.1 CDS BAD_0427 NC_008618.1 537137 538030 D Orthologue of SAV4981; putative binding protein-dependent transporter 537137..538030 Bifidobacterium adolescentis ATCC 15703 4557507 YP_909291.1 CDS xynB NC_008618.1 538107 539738 D Orthologue of L0234; intracellular xylan-degrading enzyme; beta-1,4-xylosidase 538107..539738 Bifidobacterium adolescentis ATCC 15703 4556763 YP_909292.1 CDS BAD_0429 NC_008618.1 539792 541771 D Orthologue of XCV4334; putative secreted protein 539792..541771 Bifidobacterium adolescentis ATCC 15703 4557508 YP_909293.1 CDS BAD_0430 NC_008618.1 541811 543211 D Orthologue of bll4001; putative esterase 541811..543211 Bifidobacterium adolescentis ATCC 15703 4557509 YP_909294.1 CDS BAD_0431 NC_008618.1 543244 543903 D Orthologue of Tfu_1260; maltose O-acetyltransferase 543244..543903 Bifidobacterium adolescentis ATCC 15703 4557510 YP_909295.1 CDS xylB NC_008618.1 544106 545626 R COG family: sugar (pentuloseand hexulose) kinases; Orthologue of BL1709; PFAM_ID: FGGY; Xylulokinase; xylulose kinase complement(544106..545626) Bifidobacterium adolescentis ATCC 15703 4556761 YP_909296.1 CDS BAD_0433 NC_008618.1 545796 547028 D COG family: transcriptional regulators; Orthologue of BL1710; PFAM_ID:ROK; XylR-type repressor 545796..547028 Bifidobacterium adolescentis ATCC 15703 4557511 YP_909297.1 CDS ggtA NC_008618.1 547317 547709 D Orthologue of MAP0607c; gamma-glutamyltranspeptidase 547317..547709 Bifidobacterium adolescentis ATCC 15703 4557702 YP_909298.1 CDS BAD_0435 NC_008618.1 548255 549241 D Orthologue of BH3701; beta-galactosidase 548255..549241 Bifidobacterium adolescentis ATCC 15703 4557512 YP_909299.1 CDS BAD_0436 NC_008618.1 549364 550275 D Glucose kinase; Orthologue of LBA1367; transcriptional regulator 549364..550275 Bifidobacterium adolescentis ATCC 15703 4557513 YP_909300.1 CDS BAD_0437 NC_008618.1 550253 551059 R COG family: transcriptional regulator; Orthologue of BL1756; PFAM_ID:tetR; TetR-type transcriptional regulator complement(550253..551059) Bifidobacterium adolescentis ATCC 15703 4557514 YP_909301.1 CDS BAD_0438 NC_008618.1 551156 551989 R COG family: esterase_lipase; Orthologue of BL0682; xylan esterase complement(551156..551989) Bifidobacterium adolescentis ATCC 15703 4557515 YP_909302.1 CDS BAD_0439 NC_008618.1 552313 552897 R Orthologue of TM1848; Similar to GP:3184120 percent identity: 97.66;identified by sequence similarity; cellobiose-phosphorylase complement(552313..552897) Bifidobacterium adolescentis ATCC 15703 4557516 YP_909303.1 CDS rpmE NC_008618.1 553351 553563 D RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 553351..553563 Bifidobacterium adolescentis ATCC 15703 4556502 YP_909304.1 CDS prfA NC_008618.1 553745 554833 D recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 553745..554833 Bifidobacterium adolescentis ATCC 15703 4556583 YP_909305.1 CDS BAD_0442 NC_008618.1 554843 555763 D COG family: predicted rRNA or tRNA methylase; Orthologue of BL1713; methylase protein 554843..555763 Bifidobacterium adolescentis ATCC 15703 4557517 YP_909306.1 CDS BAD_0443 NC_008618.1 555904 557205 D COG family: ABC-type branched-chain amino acidtransport systems_ periplasmic component; Orthologue of BL1714; solute binding protein of ABC transporter for branched-chain amino acids 555904..557205 Bifidobacterium adolescentis ATCC 15703 4557518 YP_909307.1 CDS BAD_0444 NC_008618.1 557338 558306 D COG family: branched-chain amino acid ABC-typetransport system_ permease components; Orthologue of BL1715; branched-chain amino acids ABC transporter permease 557338..558306 Bifidobacterium adolescentis ATCC 15703 4557519 YP_909308.1 CDS BAD_0445 NC_008618.1 558311 559432 D COG family: branched-chain amino acid ABC-typetransport system_ permease components; Orthologue of BL1716; branched-chain amino acids ABC transporter permease 558311..559432 Bifidobacterium adolescentis ATCC 15703 4557520 YP_909309.1 CDS BAD_0446 NC_008618.1 559429 560241 D COG family: ABC-type branched-chain amino acidtransport systems_ ATPase component; Orthologue of BL1717; branched-chain amino acids ABC transporter ATP-binding protein 559429..560241 Bifidobacterium adolescentis ATCC 15703 4557521 YP_909310.1 CDS BAD_0447 NC_008618.1 560241 560945 D COG family: ABC-type branched-chain amino acidtransport systems_ ATPase component; Orthologue of BL1718; branched-chain amino acids ABC transporter ATP-binding protein 560241..560945 Bifidobacterium adolescentis ATCC 15703 4557522 YP_909311.1 CDS BAD_0448 NC_008618.1 561103 561765 D COG family: putative translation factor (Sua5); Orthologue of BL1720; PFAM_ID: Sua5_yciO_yrdC; Sua5/YciO/YrdC family protein 561103..561765 Bifidobacterium adolescentis ATCC 15703 4557523 YP_909312.1 CDS rfe NC_008618.1 561762 562940 D COG family: UDP-N-acetylmuramyl pentapeptidephosphotransferase_UDP-N-acetylglucosamine-1- phosphatetransferase; Orthologue of BL1721; undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase 561762..562940 Bifidobacterium adolescentis ATCC 15703 4556634 YP_909313.1 CDS guaB NC_008618.1 563078 564622 D Identified by sequence similarity; Orthologue of Lxx19860_BL1722; inosine-5'-monophosphate dehydrogenase 563078..564622 Bifidobacterium adolescentis ATCC 15703 4556143 YP_909314.1 CDS BAD_0451 NC_008618.1 564786 565820 R COG family: transcriptional regulators; Orthologue of BL0528; PFAM_ID:lacI; LacI-type transcriptional regulator complement(564786..565820) Bifidobacterium adolescentis ATCC 15703 4557524 YP_909315.1 CDS aglA NC_008618.1 566137 567909 D COG family: glycosidases; Maltase-like enzyme; Orthologue of BL0529; PFAM_ID:alpha-amylase; alpha-1,4-glucosidase 566137..567909 Bifidobacterium adolescentis ATCC 15703 4557199 YP_909316.1 CDS orn NC_008618.1 568148 568801 D 3'-5' exoribonuclease specific for small oligoribonuclotides; oligoribonuclease 568148..568801 Bifidobacterium adolescentis ATCC 15703 4556341 YP_909317.1 CDS BAD_0454 NC_008618.1 568829 569728 D Orthologue of SAV4444; PF00702: haloacid dehalogenase-like hydrolase; hypothetical protein 568829..569728 Bifidobacterium adolescentis ATCC 15703 4556389 YP_909318.1 CDS BAD_0455 NC_008618.1 569773 571185 D COG family: ATP-dependent exoDNase (exonuclease V)_alpha subunit - helicase superfamily I member; Orthologue of BL1724; helicase 569773..571185 Bifidobacterium adolescentis ATCC 15703 4556390 YP_909319.1 CDS proS NC_008618.1 571767 573584 D catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 571767..573584 Bifidobacterium adolescentis ATCC 15703 4556589 YP_909320.1 CDS BAD_0457 NC_008618.1 573978 574556 D COG family: single-stranded DNA-binding protein; Orthologue of BL1729; PFAM_ID: SSB; hypothetical protein 573978..574556 Bifidobacterium adolescentis ATCC 15703 4556391 YP_909321.1 CDS pepO NC_008618.1 574595 576685 R COG family: predictedmetalloendopeptidase; Orthologue of BL1730; PFAM_ID: Peptidase_M13; Zinc metalloprotease; M13 family peptidase complement(574595..576685) Bifidobacterium adolescentis ATCC 15703 4556557 YP_909322.1 CDS map NC_008618.1 576816 577589 D COG family: methionineaminopeptidase; Orthologue of BL1732; PFAM_ID: Peptidase_M24; methionine aminopeptidase 576816..577589 Bifidobacterium adolescentis ATCC 15703 4556364 YP_909323.1 CDS gltA2 NC_008618.1 577730 579025 D COG family: citrate synthase; Orthologue of BL1733; citrate synthase 1 577730..579025 Bifidobacterium adolescentis ATCC 15703 4557719 YP_909324.1 CDS BAD_0461 NC_008618.1 579167 580159 D COG family: tetrahydrodipicolinateN- succinyltransferase; Orthologue of BL1734; hypothetical protein 579167..580159 Bifidobacterium adolescentis ATCC 15703 4556392 YP_909325.1 CDS BAD_0462 NC_008618.1 580167 580688 D SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 580167..580688 Bifidobacterium adolescentis ATCC 15703 4556393 YP_909326.1 CDS prfB NC_008618.1 581062 582192 D recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1; peptide chain release factor 2 581062..582192 Bifidobacterium adolescentis ATCC 15703 4556584 YP_909327.1 CDS ftsE NC_008618.1 582216 583454 D COG family: predicted ATPase involved in celldivision; Orthologue of BL1183; FtsE-like ATP binding protein in cell division 582216..583454 Bifidobacterium adolescentis ATCC 15703 4557231 YP_909328.1 CDS ftsX NC_008618.1 583451 584377 D COG family: cell division protein; Orthologue of BL1182; PFAM_ID:DUF214; FtsX-like protein in cell division 583451..584377 Bifidobacterium adolescentis ATCC 15703 4557235 YP_909329.1 CDS BAD_0466 NC_008618.1 584387 585889 D Orthologue of BL1181; hypothetical protein 584387..585889 Bifidobacterium adolescentis ATCC 15703 4556394 YP_909330.1 CDS smpB NC_008618.1 586018 586497 D binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 586018..586497 Bifidobacterium adolescentis ATCC 15703 4556450 YP_909331.1 CDS BAD_0468 NC_008618.1 586624 587571 D COG family: ABC-type amino acid transport system_periplasmic component; Orthologue of BL1179_BL1178; ABC transporter substrate-binding protein 586624..587571 Bifidobacterium adolescentis ATCC 15703 4556395 YP_909332.1 CDS BAD_0469 NC_008618.1 587682 588617 D COG family: ABC-type amino acid transport system_periplasmic component; Orthologue of BL1179_BL1178; ABC transporter substrate-binding protein 587682..588617 Bifidobacterium adolescentis ATCC 15703 4556396 YP_909333.1 CDS BAD_0470 NC_008618.1 588667 589734 D COG family: ABC-type amino acid transport system_periplasmic component; Orthologue of BL1179_BL1178; ABC transporter substrate-binding protein 588667..589734 Bifidobacterium adolescentis ATCC 15703 4556397 YP_909334.1 CDS BAD_0471 NC_008618.1 589769 590752 D COG family: ABC-type amino acid transport system_permease component; Orthologue of BL1177; ABC transporter permease 589769..590752 Bifidobacterium adolescentis ATCC 15703 4556398 YP_909335.1 CDS BAD_0472 NC_008618.1 590749 591558 D COG family: ABC-type polar amino acid transportsystem_ ATPase component; Orthologue of BL1176; ABC transporter ATP-binding protein 590749..591558 Bifidobacterium adolescentis ATCC 15703 4556399 YP_909336.1 CDS glmS NC_008618.1 591788 593680 D Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 591788..593680 Bifidobacterium adolescentis ATCC 15703 4557710 YP_909337.1 CDS BAD_0474 NC_008618.1 593739 594425 D COG family: pseudouridylate synthases_ 23SRNA-specific; Orthologue of BL1174; RNA-uridine isomerase_RNA pseudouridylate synthase; pseudouridine synthase 593739..594425 Bifidobacterium adolescentis ATCC 15703 4556400 YP_909338.1 CDS BAD_0475 NC_008618.1 594534 595826 D involved in the import of serine and threonine coupled with the import of sodium; serine/threonine transporter SstT 594534..595826 Bifidobacterium adolescentis ATCC 15703 4556401 YP_909339.1 CDS BAD_0476 NC_008618.1 596016 597449 D COG family: sugar-binding periplasmicproteins_domains; Orthologue of BL1163; sugar ABC transporter solute-binding protein 596016..597449 Bifidobacterium adolescentis ATCC 15703 4556402 YP_909340.1 CDS BAD_0477 NC_008618.1 597563 598333 R type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase complement(597563..598333) Bifidobacterium adolescentis ATCC 15703 4556403 YP_909341.1 CDS BAD_0478 NC_008618.1 598425 599603 R Orthologue of SH1703; Phosphopantothenate-cysteine ligase; Ppantothenate metabolism flavoprotein homolog; phosphopantothenoylcysteine decarboxylase complement(598425..599603) Bifidobacterium adolescentis ATCC 15703 4556404 YP_909342.1 CDS BAD_0479 NC_008618.1 599907 601562 D COG family: ABC-type dipeptide_oligopeptide_nickeltransport systems_ periplasmic components; Orthologue of BL1161; peptides ABC transporter substrate-binding protein 599907..601562 Bifidobacterium adolescentis ATCC 15703 4556405 YP_909343.1 CDS BAD_0480 NC_008618.1 601578 602558 D COG family: ABC-type dipeptide_oligopeptide_nickeltransport systems_ permease components; Orthologue of BL1160; peptide ABC transporter permease 601578..602558 Bifidobacterium adolescentis ATCC 15703 4556406 YP_909344.1 CDS BAD_0481 NC_008618.1 602636 603493 D COG family: ABC-type dipeptide_oligopeptide_nickeltransport systems_ permease components; Orthologue of BL1159; peptide ABC transporter permease 602636..603493 Bifidobacterium adolescentis ATCC 15703 4556407 YP_909345.1 CDS oppD NC_008618.1 603490 604320 D COG family: ATPase components of variousABC-type transport systems_ contain duplicated ATPase; Orthologue of BL1158; peptide ABC transporter ATP-binding protein 603490..604320 Bifidobacterium adolescentis ATCC 15703 4556337 YP_909346.1 CDS oppF NC_008618.1 604334 605089 D COG family: ATPase components of variousABC-type transport systems_ contain duplicated ATPase; Orthologue of BL1157; peptide ABC transporter ATP-binding protein 604334..605089 Bifidobacterium adolescentis ATCC 15703 4556338 YP_909347.1 CDS BAD_0484 NC_008618.1 605287 606042 D Orthologue of Lxx17750; hypothetical protein 605287..606042 Bifidobacterium adolescentis ATCC 15703 4556310 YP_909348.1 CDS BAD_0485 NC_008618.1 606027 607208 D Orthologue of Lxx17740; hypothetical protein 606027..607208 Bifidobacterium adolescentis ATCC 15703 4556311 YP_909349.1 CDS BAD_0486 NC_008618.1 607205 607870 D ATP-binding protein; Identified by sequence similarity; Orthologue of Lxx18820; ABC transporter 607205..607870 Bifidobacterium adolescentis ATCC 15703 4556312 YP_909350.1 CDS BAD_0487 NC_008618.1 607867 609015 D Orthologue of Lxx17710; hypothetical protein 607867..609015 Bifidobacterium adolescentis ATCC 15703 4556313 YP_909351.1 CDS BAD_0488 NC_008618.1 609455 610363 D ATP-binding protein; Orthologue of lp_2743; ABC transporter 609455..610363 Bifidobacterium adolescentis ATCC 15703 4556314 YP_909352.1 CDS ytfF NC_008618.1 610360 611307 D Orthologue of STY4758; Similar to Escherichia coli hypothetical 35.5 kDa protein in rpli-cpdb intergenic region ytfF SW:YTFF_ECOLI(P39314)Contains possible membrane spanning hydrophobic domains; hypothetical protein 610360..611307 Bifidobacterium adolescentis ATCC 15703 4556777 YP_909353.1 CDS cbsSV NC_008618.1 611548 612684 D Beta-thionase; COGfamily: cysteine synthase; Orthologue of BL1156; PFAM_ID: PALP; serine sulfhydrase; cystathionine beta-synthase 611548..612684 Bifidobacterium adolescentis ATCC 15703 4557562 YP_909354.1 CDS metB NC_008618.1 612700 613968 D catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine; cystathionine gamma-synthase 612700..613968 Bifidobacterium adolescentis ATCC 15703 4556368 YP_909355.1 CDS recQ NC_008618.1 614005 616029 D COG family: superfamily II DNA helicase; Orthologue of BL1153; PFAM_ID: HRDC; PFAM_ID: helicase_C; PFAM_ID:DEAD; ATP-dependent DNA helicase RecQ 614005..616029 Bifidobacterium adolescentis ATCC 15703 4556630 YP_909356.1 CDS BAD_0493 NC_008618.1 616124 616609 D catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2; S-ribosylhomocysteinase 616124..616609 Bifidobacterium adolescentis ATCC 15703 4556315 YP_909357.1 CDS BAD_0494 NC_008618.1 616687 617223 D Orthologue of BL1151; hypothetical protein 616687..617223 Bifidobacterium adolescentis ATCC 15703 4556316 YP_909358.1 CDS yfnA NC_008618.1 617304 618731 R COG family: amino acid transporters; Orthologue of BL1150; PFAM_ID:aa_permeases; amino acid transporter complement(617304..618731) Bifidobacterium adolescentis ATCC 15703 4556770 YP_909359.1 CDS alr NC_008618.1 618966 620324 D COG family: alanine racemase; Orthologue of BL1149; PFAM_ID:Ala_racemase; alanine racemase 618966..620324 Bifidobacterium adolescentis ATCC 15703 4557207 YP_909360.1 CDS BAD_0497 NC_008618.1 620375 621634 D dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein 620375..621634 Bifidobacterium adolescentis ATCC 15703 4556317 YP_909361.1 CDS dnaG NC_008618.1 621658 623745 D synthesizes RNA primers at the replication forks; DNA primase 621658..623745 Bifidobacterium adolescentis ATCC 15703 4556253 YP_909362.1 CDS BAD_0499 NC_008618.1 624041 625234 D COG family: di- and tricarboxylate transporters; Orthologue of BL1140; transporter 624041..625234 Bifidobacterium adolescentis ATCC 15703 4556318 YP_909363.1 CDS BAD_0500 NC_008618.1 625372 626412 D Orthologue of lp_2696; integral membrane protein 625372..626412 Bifidobacterium adolescentis ATCC 15703 4556319 YP_909364.1 CDS BAD_0501 NC_008618.1 626629 628617 D GTPase; Orthologue of LBA0051; translation elongation factors 626629..628617 Bifidobacterium adolescentis ATCC 15703 4556320 YP_909365.1 CDS BAD_0502 NC_008618.1 629116 629853 R COG family: histone acetyltransferase Hpa2 andrelated acetyltransferases; Orthologue of BL0130; PFAM_ID: Acetyltransf; hypothetical protein complement(629116..629853) Bifidobacterium adolescentis ATCC 15703 4556321 YP_909366.1 CDS BAD_0503 NC_008618.1 630031 630687 D COG family: ABC-type amino acid transport system_permease component; Orthologue of BL0074; PFAM_ID: BPD_transp; ABC transporter permease 630031..630687 Bifidobacterium adolescentis ATCC 15703 4556322 YP_909367.1 CDS BAD_0504 NC_008618.1 630674 631348 D COG family: ABC-type amino acid transport system_permease component; Orthologue of BL0075; PFAM_ID: BPD_transp; amino acids ABC transporter permease 630674..631348 Bifidobacterium adolescentis ATCC 15703 4556323 YP_909368.1 CDS gltL NC_008618.1 631341 632219 D COG family: ABC-type polar amino acidtransport system_ ATPase component; Orthologue of BL0076; PFAM_ID: ABC_tran; glutamate/aspartate ABC transporter ATP-binding protein 631341..632219 Bifidobacterium adolescentis ATCC 15703 4556158 YP_909369.1 CDS BAD_0506 NC_008618.1 632264 633169 D COG family: ABC-type amino acid transport system_periplasmic component; Orthologue of BL0077; PFAM_ID: SBP_bac_3; glutamate/aspartate ABC transporter substrate-binding protein 632264..633169 Bifidobacterium adolescentis ATCC 15703 4556324 YP_909370.1 CDS metC NC_008618.1 633498 634733 D Beta-cystathionase; COG family: cystathioninebeta-lyases_cystathionine gamma-synthases; Orthologue of BL0078; PFAM_ID:Cys_Met_Meta_PP; cystathionine beta-lyase 633498..634733 Bifidobacterium adolescentis ATCC 15703 4556408 YP_909371.1 CDS BAD_0508 NC_008618.1 635013 635966 D COG family: membrane protease subunits_stomatin_prohibitin homologs; Orthologue of BL0084; PFAM_ID: Band_7; hypothetical protein 635013..635966 Bifidobacterium adolescentis ATCC 15703 4556325 YP_909372.1 CDS BAD_0509 NC_008618.1 636186 636650 R Orthologue of ABC3794; transposase complement(636186..636650) Bifidobacterium adolescentis ATCC 15703 4556326 YP_909373.1 CDS BAD_0510 NC_008618.1 636908 637639 D COG family: ABC-type transport systems_ involved inlipoprotein release_ ATPase components; Orthologue of BL1135; PFAM_ID: ABC_tran; ABC transporter ATP-binding protein 636908..637639 Bifidobacterium adolescentis ATCC 15703 4556327 YP_909374.1 CDS BAD_0511 NC_008618.1 637667 638863 D COG family: S-layer domain; Orthologue of BL1134; hypothetical protein 637667..638863 Bifidobacterium adolescentis ATCC 15703 4556328 YP_909375.1 CDS BAD_0512 NC_008618.1 638866 640377 D COG family: ABC-type transport systems_ involved inlipoprotein release_ permease components; Orthologue of BL1133; PFAM_ID: DUF214; putative ABC transporter 638866..640377 Bifidobacterium adolescentis ATCC 15703 4556329 YP_909376.1 CDS dxs NC_008618.1 640494 642398 R catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase complement(640494..642398) Bifidobacterium adolescentis ATCC 15703 4556266 YP_909377.1 CDS badC NC_008618.1 642573 643574 D COG family: NADPH; Orthologue of BL1131; PFAM_ID: adh_zinc; Quinone oxidoreductase; alcohol dehydrogenase 642573..643574 Bifidobacterium adolescentis ATCC 15703 4557547 YP_909378.1 CDS purE NC_008618.1 643628 644125 D Air carboxylase AirC; COG family:phosphoribosylcarboxyaminoimidazole (ncair) mutase; Orthologue of BL1130; PFAM_ID: AIRC; phosphoribosylaminoimidazole carboxylase catalytic subunit 643628..644125 Bifidobacterium adolescentis ATCC 15703 4556695 YP_909379.1 CDS purK NC_008618.1 644154 645284 D With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit 644154..645284 Bifidobacterium adolescentis ATCC 15703 4556600 YP_909380.1 CDS fur NC_008618.1 645296 645694 D COG family: Fe2+_Zn2+ uptake regulationproteins; Orthologue of BL1128; PFAM_ID: FUR; metal uptake regulator ferric uptake regulator protein 645296..645694 Bifidobacterium adolescentis ATCC 15703 4557239 YP_909381.1 CDS BAD_0518 NC_008618.1 645904 647913 D COG family: phosphoglycerol transferase and relatedproteins_ alkaline phosphatase superfamily; Orthologue of BL1125; hypothetical protein 645904..647913 Bifidobacterium adolescentis ATCC 15703 4556117 YP_909382.1 CDS purD NC_008618.1 648078 649340 R catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase complement(648078..649340) Bifidobacterium adolescentis ATCC 15703 4556694 YP_909383.1 CDS purM NC_008618.1 649431 650465 R catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase complement(649431..650465) Bifidobacterium adolescentis ATCC 15703 4556601 YP_909384.1 CDS purF NC_008618.1 650485 651999 R Catalyzes first step of the de novo purinenucleotide biosynthetic pathway; Orthologue of ABC1031_BL1121; amidophosphoribosyltransferase complement(650485..651999) Bifidobacterium adolescentis ATCC 15703 4556696 YP_909385.1 CDS BAD_0522 NC_008618.1 652232 653866 D COG family: nucleotidyltransferase_DNA polymeraseinvolved in DNA repair; Orthologue of BL1114; PFAM_ID: IMS; hypothetical protein 652232..653866 Bifidobacterium adolescentis ATCC 15703 4556118 YP_909386.1 CDS purQ_purL NC_008618.1 654202 657936 R Bifunctional enzyme; Orthologue of CAC1655_BL1108; phosphoribosylformylglycinamidine synthase complement(654202..657936) Bifidobacterium adolescentis ATCC 15703 4556602 YP_909387.1 CDS purC NC_008618.1 658055 658807 R catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase complement(658055..658807) Bifidobacterium adolescentis ATCC 15703 4556693 YP_909388.1 CDS purT NC_008618.1 658943 660196 R non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis; phosphoribosylglycinamide formyltransferase 2 complement(658943..660196) Bifidobacterium adolescentis ATCC 15703 4556603 YP_909389.1 CDS BAD_0526 NC_008618.1 660232 661398 D COG family: predicted glycosyltransferases; Orthologue of BL1104; PFAM_ID: Glycos_transf_1; glycosyltransferase 660232..661398 Bifidobacterium adolescentis ATCC 15703 4556119 YP_909390.1 CDS tal NC_008618.1 661490 662515 R COG family: threonine aldolase; Orthologue of BL1103; low specificity-threonine aldolase complement(661490..662515) Bifidobacterium adolescentis ATCC 15703 4556459 YP_909391.1 CDS BAD_0528 NC_008618.1 662961 664022 D COG family: predicted Na+-dependent transporter; Orthologue of BL1102; PFAM_ID: SBF; Na+ dependent nucleoside transporter 662961..664022 Bifidobacterium adolescentis ATCC 15703 4556120 YP_909392.1 CDS BAD_0529 NC_008618.1 664397 664612 R Orthologue of BPSL0772_BL1101; hypothetical protein complement(664397..664612) Bifidobacterium adolescentis ATCC 15703 4556121 YP_909393.1 CDS rpsL NC_008618.1 664759 665130 D interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 664759..665130 Bifidobacterium adolescentis ATCC 15703 4556658 YP_909394.1 CDS rpsG NC_008618.1 665136 665606 D binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 665136..665606 Bifidobacterium adolescentis ATCC 15703 4556653 YP_909395.1 CDS fusA1 NC_008618.1 665637 667766 D EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 665637..667766 Bifidobacterium adolescentis ATCC 15703 4557240 YP_909396.1 CDS tuf NC_008618.1 667935 669134 D EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 667935..669134 Bifidobacterium adolescentis ATCC 15703 4556731 YP_909397.1 CDS BAD_0534 NC_008618.1 669138 670265 R Orthologue of c5233; hypothetical protein complement(669138..670265) Bifidobacterium adolescentis ATCC 15703 4556122 YP_003856793.1 CDS BAD_1700 NC_008618.1 669315 669878 D elongation factor P 669315..669878 Bifidobacterium adolescentis ATCC 15703 9711832 YP_909398.1 CDS carA NC_008618.1 670458 671648 D catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 670458..671648 Bifidobacterium adolescentis ATCC 15703 4557554 YP_909399.1 CDS carB NC_008618.1 671641 675021 D Composed of two chains; the small (or glutamine)chain promotes the hydrolysis of glutamine to ammonia_which is used by the large (or ammonia) chain tosynthesize carbamoyl phosphate; binds manganese; involvedin pyrimidine synthesis; Orthologue of Rv1384_BL0068; carbamoyl-phosphate synthase large subunit 671641..675021 Bifidobacterium adolescentis ATCC 15703 4557555 YP_909400.1 CDS BAD_0537 NC_008618.1 675021 675962 D COG family:orotidine-5'-phosphate decarboxylase; Omp decarboxylase; Ompdcase; Orthologue of BL0069; orotidine 5'-phosphate decarboxylase 675021..675962 Bifidobacterium adolescentis ATCC 15703 4556123 YP_909401.1 CDS gmk NC_008618.1 676023 676610 D Essential for recycling GMP and indirectly, cGMP; guanylate kinase 676023..676610 Bifidobacterium adolescentis ATCC 15703 4556124 YP_909402.1 CDS ilvD NC_008618.1 676698 678557 R catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase complement(676698..678557) Bifidobacterium adolescentis ATCC 15703 4556215 YP_909403.1 CDS rpoZ NC_008618.1 678772 679056 D Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega 678772..679056 Bifidobacterium adolescentis ATCC 15703 4556645 YP_909404.1 CDS metK NC_008618.1 679230 680444 D catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 679230..680444 Bifidobacterium adolescentis ATCC 15703 4556411 YP_909405.1 CDS priA NC_008618.1 680503 682734 D binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA 680503..682734 Bifidobacterium adolescentis ATCC 15703 4556585 YP_909406.1 CDS BAD_0543 NC_008618.1 682801 683511 D COG family: predicted hydrolases of the Hadsuperfamily; Orthologue of BL1790; PFAM_ID: Hydrolase; alpha beta hydrolase 682801..683511 Bifidobacterium adolescentis ATCC 15703 4556125 YP_909407.1 CDS fmt NC_008618.1 683617 684579 D COG family: methionyl-tRNA formyltransferase; Orthologue of BL1789; PFAM_ID: formyl_transf; methionyl-tRNA formyltransferase 683617..684579 Bifidobacterium adolescentis ATCC 15703 4556971 YP_909408.1 CDS serB NC_008618.1 684731 685414 R COG family: phosphoserine phosphatase; Orthologue of BL1792; PFAM_ID:Hydrolase; Psp:O-phosphoserine phosphohydrolase; phosphoserine phosphatase complement(684731..685414) Bifidobacterium adolescentis ATCC 15703 4556712 YP_909409.1 CDS BAD_0546 NC_008618.1 685488 687035 D COG family: ATPases of the Aaa+ class; Orthologue of BL1794; PFAM_ID:AAA; AAA ATPase 685488..687035 Bifidobacterium adolescentis ATCC 15703 4556126 YP_909410.1 CDS BAD_0547 NC_008618.1 687107 688690 D Orthologue of BL1795; proteasome-associated protein 687107..688690 Bifidobacterium adolescentis ATCC 15703 4556127 YP_909411.1 CDS BAD_0548 NC_008618.1 688825 689655 D COG family: archaeal fructose-1_6-bisphosphataseand related enzymes of inositol monophosphatase family; Orthologue of BL1796; PFAM_ID: inositol_P; inositol monophosphatase 688825..689655 Bifidobacterium adolescentis ATCC 15703 4556128 YP_909412.1 CDS BAD_0549 NC_008618.1 689940 691406 D Orthologue of BL1797; proteasome-associated protein 689940..691406 Bifidobacterium adolescentis ATCC 15703 4556129 YP_909413.1 CDS BAD_0550 NC_008618.1 691480 692280 R Orthologue of BL1086; hypothetical protein complement(691480..692280) Bifidobacterium adolescentis ATCC 15703 4556130 YP_909414.1 CDS BAD_0551 NC_008618.1 692277 692636 R COG family: transcriptional regulators; Orthologue of BL1087; PFAM_ID:MarR; MarR-type transcriptional regulator complement(692277..692636) Bifidobacterium adolescentis ATCC 15703 4556131 YP_909415.1 CDS hup NC_008618.1 692781 693062 R COG family: bacterial nucleoidDNA-binding protein; Orthologue of BL1798; PFAM_ID: Bac_DNA_binding; DNA-binding protein HB1 complement(692781..693062) Bifidobacterium adolescentis ATCC 15703 4556185 YP_909416.1 CDS BAD_0553 NC_008618.1 693217 695652 R COG family: predicted integral membrane protein; Orthologue of BL1799; hypothetical protein complement(693217..695652) Bifidobacterium adolescentis ATCC 15703 4556132 YP_909417.1 CDS purB NC_008618.1 695800 697242 R Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase complement(695800..697242) Bifidobacterium adolescentis ATCC 15703 4556692 YP_909418.1 CDS BAD_0555 NC_008618.1 697282 698841 R Orthologue of BL1804; hypothetical protein complement(697282..698841) Bifidobacterium adolescentis ATCC 15703 4556133 YP_909419.1 CDS BAD_0556 NC_008618.1 698838 699167 R Orthologue of BL1805; hypothetical protein complement(698838..699167) Bifidobacterium adolescentis ATCC 15703 4556134 YP_909420.1 CDS ebpS NC_008618.1 699314 699886 R Orthologue of SH1431; cell surface elastin binding protein EbpS complement(699314..699886) Bifidobacterium adolescentis ATCC 15703 4556267 YP_909421.1 CDS BAD_0558 NC_008618.1 699883 700902 R COG family: uncharacterized Bcr; Orthologue of BL1807; hypothetical protein complement(699883..700902) Bifidobacterium adolescentis ATCC 15703 4556135 YP_909422.1 CDS BAD_0559 NC_008618.1 700899 701966 R COG family: uncharacterized Bcr; Orthologue of BL1808; hypothetical protein complement(700899..701966) Bifidobacterium adolescentis ATCC 15703 4556427 YP_909423.1 CDS BAD_0560 NC_008618.1 701967 702488 R Orthologue of BL1809; hypothetical protein complement(701967..702488) Bifidobacterium adolescentis ATCC 15703 4556428 YP_909424.1 CDS BAD_0561 NC_008618.1 702488 703441 R COG family: uncharacterized Acr; Orthologue of BL1810; hypothetical protein complement(702488..703441) Bifidobacterium adolescentis ATCC 15703 4556429 YP_909425.1 CDS BAD_0562 NC_008618.1 703438 704505 R COG family: MoxR-like ATPases; Orthologue of BL1811; PFAM_ID: AAA; PFAM_ID: Mg_chelatase; magnesium chelatase family protein complement(703438..704505) Bifidobacterium adolescentis ATCC 15703 4556430 YP_909426.1 CDS ung NC_008618.1 704524 705228 R Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase complement(704524..705228) Bifidobacterium adolescentis ATCC 15703 4556736 YP_909427.1 CDS BAD_0564 NC_008618.1 705366 706079 D Orthologue of BL1813; hypothetical protein 705366..706079 Bifidobacterium adolescentis ATCC 15703 4556431 YP_909428.1 CDS groEL NC_008618.1 706354 707970 D 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL 706354..707970 Bifidobacterium adolescentis ATCC 15703 4556139 YP_909429.1 CDS BAD_0566 NC_008618.1 708075 708365 R COG family: methyl-accepting chemotaxis protein; Orthologue of BL0003; hypothetical protein complement(708075..708365) Bifidobacterium adolescentis ATCC 15703 4556432 YP_909430.1 CDS BAD_0567 NC_008618.1 708499 709338 D Orthologue of BL0004; hypothetical protein 708499..709338 Bifidobacterium adolescentis ATCC 15703 4556433 YP_909431.1 CDS BAD_0568 NC_008618.1 709342 710073 D COG family: response regulators consisting of aCheY-like receiver domain and a HTH DNA-binding domain; Orthologue of BL0005; PFAM_ID: response_reg; PFAM_ID: trans_reg_C; response regulator of two-component system 709342..710073 Bifidobacterium adolescentis ATCC 15703 4556434 YP_909432.1 CDS BAD_0569 NC_008618.1 710148 711929 D COG family: sensory transduction histidine kinases; Orthologue of BL0006; PFAM_ID: HAMP; PFAM_ID: HATPase_c; PFAM_ID: signal; sensor protein 710148..711929 Bifidobacterium adolescentis ATCC 15703 4556435 YP_909433.1 CDS cspB NC_008618.1 712081 712473 D COG family: cold shock proteins; Orthologue of BL0007; PFAM_ID:CSD; cold shock protein 712081..712473 Bifidobacterium adolescentis ATCC 15703 4557582 YP_909434.1 CDS BAD_0571 NC_008618.1 712480 713877 D Orthologue of BL0008; hypothetical protein 712480..713877 Bifidobacterium adolescentis ATCC 15703 4556436 YP_909435.1 CDS BAD_0572 NC_008618.1 713955 715019 R COG family: universal stress protein UspA andrelated nucleotide-binding proteins; Orthologue of BL0009; PFAM_ID: Usp; hypothetical protein complement(713955..715019) Bifidobacterium adolescentis ATCC 15703 4556437 YP_909436.1 CDS clpC1 NC_008618.1 715102 717696 D Orthologue of Rv3596c_BL0010; ProbableclpC1_ ATP-dependent protease ATP-binding subunit (EC3.4.-.-); ATP-dependent Clp protease ATP-binding subunit 715102..717696 Bifidobacterium adolescentis ATCC 15703 4557568 YP_909437.1 CDS BAD_0574 NC_008618.1 717891 719318 R Orthologue of BL0016; hypothetical protein complement(717891..719318) Bifidobacterium adolescentis ATCC 15703 4556438 YP_909438.1 CDS hisS NC_008618.1 719433 720824 D catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 719433..720824 Bifidobacterium adolescentis ATCC 15703 4556178 YP_909439.1 CDS aspS NC_008618.1 720872 722671 D catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 720872..722671 Bifidobacterium adolescentis ATCC 15703 4557692 YP_909440.1 CDS BAD_0577 NC_008618.1 722865 724370 D Orthologue of lin0840; glutamine ABC transporter 722865..724370 Bifidobacterium adolescentis ATCC 15703 4556439 YP_909441.1 CDS BAD_0578 NC_008618.1 724367 725107 D ATP-binding protein; Orthologue of SMU.805c; putative amino acid ABC transporter 724367..725107 Bifidobacterium adolescentis ATCC 15703 4556440 YP_909442.1 CDS gluA NC_008618.1 725242 726039 D COG family: ABC-type polar amino acidtransport system_ ATPase component; Orthologue of BL0021; PFAM_ID: ABC_tran; glutamate ABC transporter ATP-binding protein 725242..726039 Bifidobacterium adolescentis ATCC 15703 4556160 YP_909443.1 CDS gluB NC_008618.1 726106 726918 D COG family: ABC-type amino acid transportsystem_ periplasmic component; Orthologue of BL0022; PFAM_ID: SBP_bac_3; glutamateABC transporter substrate-binding protein 726106..726918 Bifidobacterium adolescentis ATCC 15703 4556161 YP_909444.1 CDS gluC NC_008618.1 726918 727595 D COG family: ABC-type amino acid transportsystem_ permease component; Orthologue of BL0023; PFAM_ID: BPD_transp; glutamate ABC transporter permease 726918..727595 Bifidobacterium adolescentis ATCC 15703 4556162 YP_909445.1 CDS gluD NC_008618.1 727602 728729 D COG family: ABC-type amino acid transportsystem_ permease component; Orthologue of BL0024; PFAM_ID: BPD_transp; glutamate ABC transporter permease 727602..728729 Bifidobacterium adolescentis ATCC 15703 4556163 YP_909446.1 CDS BAD_0583 NC_008618.1 728890 729849 D COG family: uncharacterized Bcr; Orthologue of BL0027; hypothetical protein 728890..729849 Bifidobacterium adolescentis ATCC 15703 4556441 YP_909447.1 CDS BAD_0584 NC_008618.1 729831 732389 R Orthologue of Tfu_0878_BL0028; DEAD/DEAH box helicase complement(729831..732389) Bifidobacterium adolescentis ATCC 15703 4556442 YP_909448.1 CDS BAD_0585 NC_008618.1 732473 733873 D COG family: uncharacterized ATPase related to thehelicase subunit of the holliday junction resolvase; Orthologue of BL0029; PFAM_ID: AAA; recombination factor protein RarA 732473..733873 Bifidobacterium adolescentis ATCC 15703 4556443 YP_909449.1 CDS BAD_0586 NC_008618.1 734012 735523 D COG family: permeases of the major facilitatorsuperfamily; Orthologue of BL0037; PFAM_ID: sugar_tr; efflux-type transporter 734012..735523 Bifidobacterium adolescentis ATCC 15703 4556444 YP_909450.1 CDS clp1 NC_008618.1 735629 736249 D COG family: proteasesubunit of ATP-dependent Clp proteases; Endopeptidase Clp1; Orthologue of BL0945; PFAM_ID:CLP_protease; ATP-dependent Clp protease proteolytic subunit 2 735629..736249 Bifidobacterium adolescentis ATCC 15703 4557566 YP_909451.1 CDS clpP NC_008618.1 736252 736953 D hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 736252..736953 Bifidobacterium adolescentis ATCC 15703 4557569 YP_909452.1 CDS clpX NC_008618.1 736950 738371 D binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 736950..738371 Bifidobacterium adolescentis ATCC 15703 4557570 YP_909453.1 CDS nhaA NC_008618.1 738838 740202 D COG family: Na+_H+ antiporter; Orthologue of BL0942; sodium/proton antiporter 738838..740202 Bifidobacterium adolescentis ATCC 15703 4556387 YP_909454.1 CDS safC NC_008618.1 740299 740970 R COG family: SAM-dependent methyltransferases; Orthologue of BL0940; PFAM_ID: Methyltransf_3; methyltransferase complement(740299..740970) Bifidobacterium adolescentis ATCC 15703 4556704 YP_909455.1 CDS BAD_0592 NC_008618.1 740972 741889 R COG family: succinate dehydrogenase_fumaratereductase Fe-S protein; Orthologue of BL0939; fumarate reductase; iron sulfur protein associated with succinate dehydrogenase complement(740972..741889) Bifidobacterium adolescentis ATCC 15703 4556445 YP_909456.1 CDS sdhA NC_008618.1 741948 743804 R COG family: succinate dehydrogenase_fumaratereductase_ flavoprotein subunits; Orthologue of BL0938; PFAM_ID: FAD_binding_2; PFAM_ID: succ_DH_flav_C; succinate dehydrogenase flavoprotein subunit complement(741948..743804) Bifidobacterium adolescentis ATCC 15703 4556706 YP_909457.1 CDS BAD_0594 NC_008618.1 743873 745177 R COG family: predicted Rossmann-foldnucleotide-binding protein involved in DNA uptake; Orthologue of BL0937; PFAM_ID: SMF; hypothetical protein complement(743873..745177) Bifidobacterium adolescentis ATCC 15703 4556446 YP_909458.1 CDS BAD_0595 NC_008618.1 745174 746703 R COG family: predicted ATPase with chaperoneactivity; Orthologue of BL0936; PFAM_ID: Mg_chelatase; hypothetical protein complement(745174..746703) Bifidobacterium adolescentis ATCC 15703 4556843 YP_909459.1 CDS BAD_0596 NC_008618.1 746703 747155 R COG family: predicted endonuclease distantlyrelated to archaeal holliday junction resolvase; Orthologue of BL0935; PFAM_ID:UPF0102; hypothetical protein complement(746703..747155) Bifidobacterium adolescentis ATCC 15703 4556844 YP_909460.1 CDS BAD_0597 NC_008618.1 747325 748200 R COG family:pyridoxal_pyridoxine_pyridoxamine kinase; Orthologue of BL0934; pyridoxine kinase complement(747325..748200) Bifidobacterium adolescentis ATCC 15703 4556845 YP_909461.1 CDS cysD NC_008618.1 748531 749841 D COG family:O-acetylhomoserine sulfhydrylase; Homocysteine synthase; Oahsulfhydrylase; Orthologue of BL0933; PFAM_ID:Cys_Met_Meta_PP; O-acetylhomoserine (thiol)-lyase 748531..749841 Bifidobacterium adolescentis ATCC 15703 4556235 YP_909462.1 CDS BAD_0599 NC_008618.1 750045 750626 D Orthologue of TK2102; hypothetical protein 750045..750626 Bifidobacterium adolescentis ATCC 15703 4556846 YP_909463.1 CDS cbiO2 NC_008618.1 750784 752409 D Orthologue of TTE1589; cobalt ABC transporter ATPase 750784..752409 Bifidobacterium adolescentis ATCC 15703 4557561 YP_909464.1 CDS BAD_0601 NC_008618.1 752409 753221 D Orthologue of Moth_0708; cobalt transport protein 752409..753221 Bifidobacterium adolescentis ATCC 15703 4556847 YP_909465.1 CDS BAD_0602 NC_008618.1 753231 754250 D AsnC/Lrp; Orthologue of Tfu_1373; regulatory proteins 753231..754250 Bifidobacterium adolescentis ATCC 15703 4556848 YP_909466.1 CDS BAD_0603 NC_008618.1 754383 755174 D COG family: ABC-type transport systems_ involved inlipoprotein release_ ATPase components; Orthologue of BL0932; PFAM_ID: ABC_tran; ABC transporter ATP-binding protein 754383..755174 Bifidobacterium adolescentis ATCC 15703 4556849 YP_909467.1 CDS BAD_0604 NC_008618.1 755232 757877 D COG family: ABC-type transport systems_ involved inlipoprotein release_ permease components; Orthologue of BL0931; PFAM_ID: DUF214; transporter 755232..757877 Bifidobacterium adolescentis ATCC 15703 4556850 YP_909468.1 CDS BAD_0605 NC_008618.1 757944 758693 R COG family: response regulators consisting of aCheY-like receiver domain and a HTH DNA-binding domain; Orthologue of BL0930; PFAM_ID: GerE; PFAM_ID: response_reg; response regulator of two-component system complement(757944..758693) Bifidobacterium adolescentis ATCC 15703 4556851 YP_909469.1 CDS BAD_0606 NC_008618.1 758770 761379 R COG family: sensory transduction histidine kinases; Orthologue of BL0929; PFAM_ID: HATPase_c; histidine kinase sensor of two-component system complement(758770..761379) Bifidobacterium adolescentis ATCC 15703 4556852 YP_909470.1 CDS pap NC_008618.1 761557 762900 D COG family:predicted hydrolases or acyltransferases (alpha_betahydrolase superfamily); Orthologue of BL0928; PFAM_ID: abhydrolase; Prolyl aminopeptidase; proline iminopeptidase 761557..762900 Bifidobacterium adolescentis ATCC 15703 4556345 YP_909471.1 CDS proC NC_008618.1 762961 763761 D COG family:pyrroline-5-carboxylate reductase; Orthologue of BL0927; PFAM_ID: P5CR; pyrroline-5-carboxylate reductase 762961..763761 Bifidobacterium adolescentis ATCC 15703 4556588 YP_909472.1 CDS BAD_0609 NC_008618.1 763779 764879 D translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 763779..764879 Bifidobacterium adolescentis ATCC 15703 4556853 YP_909473.1 CDS BAD_0610 NC_008618.1 764901 765329 D Orthologue of PAB3260; hypothetical protein 764901..765329 Bifidobacterium adolescentis ATCC 15703 4556854 YP_909474.1 CDS BAD_0611 NC_008618.1 765467 767434 D Orthologue of DR1219; ferrous iron transport protein B 765467..767434 Bifidobacterium adolescentis ATCC 15703 4556855 YP_909475.1 CDS BAD_0612 NC_008618.1 767440 767772 D Orthologue of BPSS0271; peptidase 767440..767772 Bifidobacterium adolescentis ATCC 15703 4556856 YP_909476.1 CDS BAD_0613 NC_008618.1 767787 768680 D Orthologue of BL1511; hypothetical protein 767787..768680 Bifidobacterium adolescentis ATCC 15703 4556857 YP_909477.1 CDS BAD_0614 NC_008618.1 768749 769696 D COG family: permeases of the drug_metabolitetransporter (Dmt) superfamily; Orthologue of BL1444; PFAM_ID:DUF6; hypothetical protein 768749..769696 Bifidobacterium adolescentis ATCC 15703 4556858 YP_909478.1 CDS BAD_0615 NC_008618.1 769693 770823 R COG family: uncharacterized membrane protein; Membrane protein; Orthologue of BL1094; hypothetical protein complement(769693..770823) Bifidobacterium adolescentis ATCC 15703 4556859 YP_909479.1 CDS BAD_0616 NC_008618.1 770920 771660 R Orthologue of nfa47170; putative magnesium transporter complement(770920..771660) Bifidobacterium adolescentis ATCC 15703 4556860 YP_909480.1 CDS BAD_0617 NC_008618.1 772000 772728 R Identified by Glimmer2; putative; Orthologue of BURPS1710b_2381; hypothetical protein complement(772000..772728) Bifidobacterium adolescentis ATCC 15703 4556861 YP_909481.1 CDS BAD_0618 NC_008618.1 773248 774087 D COG family: predicted permeases; Orthologue of BL1190; hypothetical protein 773248..774087 Bifidobacterium adolescentis ATCC 15703 4557328 YP_909482.1 CDS trrA NC_008618.1 774143 774889 D AraC family; Orthologue of BT9727_2894; AraC family transcriptional regulator 774143..774889 Bifidobacterium adolescentis ATCC 15703 4556725 YP_909483.1 CDS BAD_0620 NC_008618.1 775113 775925 D COG family: phosphoglyceratemutase_fructose-2_6- bisphosphatase; Orthologue of BL0911; PFAM_ID: PGAM; hypothetical protein 775113..775925 Bifidobacterium adolescentis ATCC 15703 4557329 YP_909484.1 CDS pyrP NC_008618.1 776086 777375 D COG family: xanthine_uracil permeases; Orthologue of BL0910; PFAM_ID: xan_ur_permease; purine or uracil permease 776086..777375 Bifidobacterium adolescentis ATCC 15703 4556614 YP_909485.1 CDS BAD_0622 NC_008618.1 777533 778243 D COG family: dehydrogenases with differentspecificities (related to short-chain alcoholdehydrogenases); Orthologue of BL0690; PFAM_ID: adh_short; hypothetical protein 777533..778243 Bifidobacterium adolescentis ATCC 15703 4557330 YP_909486.1 CDS BAD_0623 NC_008618.1 778341 780527 D COG family: superfamily II DNA and RNA helicases; Identified by sequence similarity; Orthologue of BL0909; PFAM_ID: DEAD; PFAM_ID: helicase_C; ATP-dependent RNA helicase 778341..780527 Bifidobacterium adolescentis ATCC 15703 4557331 YP_909487.1 CDS BAD_0624 NC_008618.1 780612 781400 R COG family: predicted permease; Orthologue of BL0063; hypothetical protein complement(780612..781400) Bifidobacterium adolescentis ATCC 15703 4557332 YP_909488.1 CDS BAD_0625 NC_008618.1 781397 782170 R COG family: ABC-type multidrug_protein_lipidtransport system_ ATPase component; Orthologue of BL0064; PFAM_ID: ABC_tran; ABC transporter ATP-binding protein complement(781397..782170) Bifidobacterium adolescentis ATCC 15703 4557333 YP_909489.1 CDS BAD_0626 NC_008618.1 782310 783710 D Identified by sequence similarity; Orthologue of Lxx14510; hypothetical protein 782310..783710 Bifidobacterium adolescentis ATCC 15703 4557334 YP_909490.1 CDS BAD_0627 NC_008618.1 783761 786349 D COG family: uncharacterized Bcr; Identified by sequence similarity; Orthologue of BL0570; hypothetical protein 783761..786349 Bifidobacterium adolescentis ATCC 15703 4557335 YP_909491.1 CDS gnt NC_008618.1 786455 787918 D catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; 6-phosphogluconate dehydrogenase 786455..787918 Bifidobacterium adolescentis ATCC 15703 4556136 YP_909492.1 CDS BAD_0629 NC_008618.1 788441 789238 R COG family:6-phosphogluconolactonase_glucosamine-6- phosphateisomerase_deaminase; Orthologue of BL0443; 6-phosphogluconolactonase complement(788441..789238) Bifidobacterium adolescentis ATCC 15703 4557336 YP_909493.1 CDS BAD_0630 NC_008618.1 789268 790215 R COG family: uncharacterized Bcr_ stimulatesglucose-6-P dehydrogenase activity; Orthologue of BL0441; hypothetical protein complement(789268..790215) Bifidobacterium adolescentis ATCC 15703 4557337 YP_909494.1 CDS zwf2 NC_008618.1 790212 791774 R catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase complement(790212..791774) Bifidobacterium adolescentis ATCC 15703 4556782 YP_909495.1 CDS BAD_0632 NC_008618.1 791948 793312 D Identified by match to protein family HMM PF01554 and match to protein family HMM TIGR00797; Orthologue of TDE1055; MATE efflux family protein 791948..793312 Bifidobacterium adolescentis ATCC 15703 4557338 YP_909496.1 CDS BAD_0633 NC_008618.1 793543 794157 D Orthologue of Atu1295; Putative ORF located using Glimmer; hypothetical protein 793543..794157 Bifidobacterium adolescentis ATCC 15703 4557339 YP_909497.1 CDS BAD_0634 NC_008618.1 794243 794896 D Orthologue of SSP0322; putative 6-O-methylguanine DNA methyltransferase 794243..794896 Bifidobacterium adolescentis ATCC 15703 4557340 YP_909498.1 CDS BAD_0635 NC_008618.1 795448 796653 R Orthologue of BT1398_BF2133; two-component system sensor histidine kinase complement(795448..796653) Bifidobacterium adolescentis ATCC 15703 4557341 YP_909499.1 CDS BAD_0636 NC_008618.1 796674 797579 R Orthologue of lp_2889; hypothetical protein complement(796674..797579) Bifidobacterium adolescentis ATCC 15703 4557342 YP_909500.1 CDS BAD_0637 NC_008618.1 797702 798217 R COG family: putative NADPH-quinone reductase(modulator of drug activity B); Orthologue of BL1749; PFAM_ID: NADHdh_2; NAD(P)H oxidoreductase complement(797702..798217) Bifidobacterium adolescentis ATCC 15703 4557343 YP_909501.1 CDS BAD_0638 NC_008618.1 798456 799232 D COG family: predicted branched-chain amino acidpermease (azaleucine resistance); Orthologue of BL1669; hypothetical protein 798456..799232 Bifidobacterium adolescentis ATCC 15703 4557344 YP_909502.1 CDS alzD NC_008618.1 799229 799567 D COG family: predicted branched-chain aminoacid permeases (azaleucine resistance); Orthologue of BL1668; branched-chain amino acid permease 799229..799567 Bifidobacterium adolescentis ATCC 15703 4557208 YP_909503.1 CDS BAD_0640 NC_008618.1 799598 800896 R COG family: beta-glucosidase-related glycosidases; Orthologue of BL1031; PFAM_ID: Glyco_hydro_3; B-hexosaminidase complement(799598..800896) Bifidobacterium adolescentis ATCC 15703 4557345 YP_909504.1 CDS BAD_0641 NC_008618.1 800966 804217 D Orthologue of Tfu_0541_BL1029; hypothetical protein 800966..804217 Bifidobacterium adolescentis ATCC 15703 4557346 YP_909505.1 CDS BAD_0642 NC_008618.1 804312 804836 D COG family: sortase and related acyltransferases; Orthologue of BL1028; PFAM_ID: Acetyltransf; N-acetyl transferase 804312..804836 Bifidobacterium adolescentis ATCC 15703 4557347 YP_909506.1 CDS pth NC_008618.1 804910 805509 D Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 804910..805509 Bifidobacterium adolescentis ATCC 15703 4556682 YP_909507.1 CDS mfd NC_008618.1 805499 809065 D Orthologue of Rv1020_BL1025; Probable mfd(alternate gene name: trcF)_ transcription-repair couplingfactor similar to many e.g.MFD_ECOLI|P30958 transcription-repair coupling factor from Escherichia coli; transcription-repair coupling factor 805499..809065 Bifidobacterium adolescentis ATCC 15703 4556414 YP_909508.1 CDS eno NC_008618.1 809189 810487 D enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 809189..810487 Bifidobacterium adolescentis ATCC 15703 4556269 YP_909509.1 CDS BAD_0646 NC_008618.1 810570 811118 D COG family: septum formation initiator; Orthologue of BL1021; hypothetical protein 810570..811118 Bifidobacterium adolescentis ATCC 15703 4557212 YP_909510.1 CDS BAD_0647 NC_008618.1 811120 811692 D COG family: uncharacterized Acr; Orthologue of BL1020; hypothetical protein 811120..811692 Bifidobacterium adolescentis ATCC 15703 4557213 YP_909511.1 CDS BAD_0648 NC_008618.1 811705 812700 D COG family: exopolyphosphatase; Orthologue of BL1019; PFAM_ID: Ppx-GppA; exopolyphosphatase-like protein 811705..812700 Bifidobacterium adolescentis ATCC 15703 4557214 YP_909512.1 CDS BAD_0649 NC_008618.1 813040 813615 D Cd efflux system component [Wolbachia endosymbiont strain TRS of Brugia malayi]; Cd efflux system component 813040..813615 Bifidobacterium adolescentis ATCC 15703 4557215 YP_909513.1 CDS sdaA NC_008618.1 813649 815109 D COG family: L-serinedeaminase; L-serine deaminase; Orthologue of BL1017; L-serine dehydratase 813649..815109 Bifidobacterium adolescentis ATCC 15703 4556705 YP_909514.1 CDS fkbP NC_008618.1 815162 815569 D COG family: FkbP-type peptidyl-prolylcis-trans isomerases 1; Orthologue of BL1016; PFAM_ID: FKBP; peptidyl-prolyl cis-trans isomerase 815162..815569 Bifidobacterium adolescentis ATCC 15703 4556969 YP_909515.1 CDS greA NC_008618.1 815608 816087 D COG family:transcription elongation factor; Orthologue of BL1015; PFAM_ID: GreA_GreB; transcription elongation factor GreA 815608..816087 Bifidobacterium adolescentis ATCC 15703 4556138 YP_909516.1 CDS BAD_0653 NC_008618.1 816185 817072 R COG family: predicted membrane proteins_ hemolysinIII homologs; Orthologue of BL1014; PFAM_ID: UPF0073; hypothetical protein complement(816185..817072) Bifidobacterium adolescentis ATCC 15703 4557216 YP_909517.1 CDS BAD_0654 NC_008618.1 817165 818691 D COG family: sensory transduction histidine kinases; Orthologue of BL1012; PFAM_ID: HATPase_c; histidine kinase-like protein 817165..818691 Bifidobacterium adolescentis ATCC 15703 4557217 YP_909518.1 CDS wblE NC_008618.1 818774 819052 R Orthologue of BL1011; WhiB-type transcription regulator complement(818774..819052) Bifidobacterium adolescentis ATCC 15703 4556753 YP_909519.1 CDS BAD_0656 NC_008618.1 819156 820919 R COG family: DNA segregation ATPase FtsK_SpoIIIE andrelated proteins; Orthologue of BL1010; PFAM_ID: FtsK_SpoIIIE; hypothetical protein complement(819156..820919) Bifidobacterium adolescentis ATCC 15703 4557218 YP_909520.1 CDS BAD_0657 NC_008618.1 821013 822365 R COG family: transcriptional regulator; Orthologue of BL1009; hypothetical protein complement(821013..822365) Bifidobacterium adolescentis ATCC 15703 4557219 YP_909521.1 CDS BAD_0658 NC_008618.1 822431 823666 R Orthologue of SCO4755; Possible transcriptional regulator; transcriptional regulator complement(822431..823666) Bifidobacterium adolescentis ATCC 15703 4557220 YP_909522.1 CDS whiB2 NC_008618.1 824099 824398 D Orthologue of BL1008; WhiB-type transcription regulator 824099..824398 Bifidobacterium adolescentis ATCC 15703 4556754 YP_909523.1 CDS BAD_0660 NC_008618.1 824432 827536 D COG family: predicted glycosyltransferases; Orthologue of BL1007; hypothetical protein 824432..827536 Bifidobacterium adolescentis ATCC 15703 4557221 YP_909524.1 CDS BAD_0661 NC_008618.1 827533 829062 D Orthologue of BL1006; hypothetical protein 827533..829062 Bifidobacterium adolescentis ATCC 15703 4557222 YP_909525.1 CDS BAD_0662 NC_008618.1 829066 829527 R Orthologue of BL1005; hypothetical protein complement(829066..829527) Bifidobacterium adolescentis ATCC 15703 4557223 YP_909526.1 CDS BAD_0663 NC_008618.1 829571 830377 D COG family: predicted hydrolases of the Hadsuperfamily; Orthologue of BL1004; hypothetical protein 829571..830377 Bifidobacterium adolescentis ATCC 15703 4557224 YP_909527.1 CDS BAD_0664 NC_008618.1 830418 831104 D COG family: predicted amidophosphoribosyltransferases; Orthologue of BL1003; PFAM_ID: Pribosyltran; hypothetical protein 830418..831104 Bifidobacterium adolescentis ATCC 15703 4557225 YP_909528.1 CDS BAD_0665 NC_008618.1 831109 832185 R COG family: sensory transduction histidine kinases; Orthologue of BL1001; PFAM_ID: HAMP; PFAM_ID: HATPase_c; PFAM_ID: signal; sensor protein complement(831109..832185) Bifidobacterium adolescentis ATCC 15703 4557226 YP_909529.1 CDS BAD_0666 NC_008618.1 832238 832960 R COG family: response regulators consisting of aCheY-like receiver domain and a HTH DNA-binding domain; Orthologue of BL1000; PFAM_ID: response_reg; PFAM_ID: trans_reg_C; response regulator of two-component system complement(832238..832960) Bifidobacterium adolescentis ATCC 15703 4557227 YP_909530.1 CDS glgB NC_008618.1 832976 835231 R catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching protein complement(832976..835231) Bifidobacterium adolescentis ATCC 15703 4557707 YP_909531.1 CDS BAD_0668 NC_008618.1 835369 835965 D COG family: transcriptional regulators_ similar toM. xanthus card; Orthologue of BL0998; PFAM_ID: TF_CarD; transcriptional regulator 835369..835965 Bifidobacterium adolescentis ATCC 15703 4557228 YP_909532.1 CDS ispF NC_008618.1 835976 836452 D catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 835976..836452 Bifidobacterium adolescentis ATCC 15703 4556225 YP_909533.1 CDS BAD_0670 NC_008618.1 836461 837297 R COG family: ABC-type Mn2+_Zn2+ transport systems_permease components; Orthologue of BL0996; PFAM_ID: ABC-3; ABC transporter permease complement(836461..837297) Bifidobacterium adolescentis ATCC 15703 4557229 YP_909534.1 CDS troB NC_008618.1 837300 838163 R COG family: ABC-typecobalamin_Fe3+-siderophores transport systems_ ATPasecomponents; Orthologue of BL0995; PFAM_ID: ABC_tran; ABC transporter ATP-binding protein complement(837300..838163) Bifidobacterium adolescentis ATCC 15703 4556718 YP_909535.1 CDS BAD_0672 NC_008618.1 838364 839431 R COG family: ABC-type Mn_Zn transport system_periplasmic Mn_Zn-binding (lipo)protein (surface adhesina); Orthologue of BL0994; PFAM_ID: Lipoprotein_4; ABC transporter substrate-binding protein complement(838364..839431) Bifidobacterium adolescentis ATCC 15703 4557230 YP_909536.1 CDS folD NC_008618.1 839577 840452 D catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 839577..840452 Bifidobacterium adolescentis ATCC 15703 4556973 YP_909537.1 CDS rpsA NC_008618.1 840606 842078 D in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 840606..842078 Bifidobacterium adolescentis ATCC 15703 4556647 YP_909538.1 CDS BAD_0675 NC_008618.1 842186 842839 D COG family: dephospho-CoA kinase; Orthologue of BL0991; PFAM_ID: CoaE; dephospho-CoA kinase 842186..842839 Bifidobacterium adolescentis ATCC 15703 4557077 YP_909539.1 CDS uvrB NC_008618.1 842844 844934 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 842844..844934 Bifidobacterium adolescentis ATCC 15703 4556740 YP_909540.1 CDS BAD_0677 NC_008618.1 844974 845957 D COG family: membrane protein TerC possiblyinvolved in tellurium resistance; Identified by sequence similarity; Orthologue of BL0989; hypothetical protein 844974..845957 Bifidobacterium adolescentis ATCC 15703 4557078 YP_909541.1 CDS pyk NC_008618.1 846056 847573 D COG family: pyruvate kinase; Orthologue of BL0988; PFAM_ID: PK; pyruvate kinase 846056..847573 Bifidobacterium adolescentis ATCC 15703 4556604 YP_909542.1 CDS BAD_0679 NC_008618.1 847882 848646 D COG family: CheY-like receiver domains; Orthologue of BL0986; PFAM_ID:response_reg; hypothetical protein 847882..848646 Bifidobacterium adolescentis ATCC 15703 4557079 YP_909543.1 CDS polA NC_008618.1 848636 851482 D has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I 848636..851482 Bifidobacterium adolescentis ATCC 15703 4556540 YP_909544.1 CDS BAD_0681 NC_008618.1 851535 852440 D COG family: uncharacterized Acr; Orthologue of BL0984; PFAM_ID: DUF34; hypothetical protein 851535..852440 Bifidobacterium adolescentis ATCC 15703 4557080 YP_909545.1 CDS BAD_0682 NC_008618.1 852447 853070 D COG family: NTP pyrophosphohydrolases includingoxidative damage repair enzymes; Orthologue of BL0983; PFAM_ID: NUDIX; MutT family pyrophosphate-releasing NTPase 852447..853070 Bifidobacterium adolescentis ATCC 15703 4557081 YP_909546.1 CDS treX NC_008618.1 853157 855301 D Orthologue of Rv1564c_BL0982; Probable treX(previously called glgX)_ Maltooligosyltrehalose synthase.Strong similarity to D83245|g1890053 treX_ glycogendebranching enzyme (glgX) from Sulfolobus acidocaldarius; glycogen operon protein GlgX 853157..855301 Bifidobacterium adolescentis ATCC 15703 4557659 YP_909547.1 CDS BAD_0684 NC_008618.1 855391 856560 R Orthologue of BL0971; hypothetical protein complement(855391..856560) Bifidobacterium adolescentis ATCC 15703 4557082 YP_909548.1 CDS BAD_0685 NC_008618.1 857574 858926 D catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 857574..858926 Bifidobacterium adolescentis ATCC 15703 4557083 YP_909549.1 CDS guaA NC_008618.1 859064 860626 R contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase complement(859064..860626) Bifidobacterium adolescentis ATCC 15703 4556142 YP_909550.1 CDS BAD_0687 NC_008618.1 861083 863560 D Orthologue of Synpcc7942_2080; putative phosphoketolase 861083..863560 Bifidobacterium adolescentis ATCC 15703 4557084 YP_909551.1 CDS pta NC_008618.1 863763 865433 D COG family:phosphotransacetylase; Orthologue of BL0968; PFAM_ID: PTA_PTB; Phosphotransacetylase; phosphate acetyltransferase 863763..865433 Bifidobacterium adolescentis ATCC 15703 4556681 YP_909552.1 CDS ackA NC_008618.1 865523 866752 D COG family: acetate kinase; Orthologue of BL0969; PFAM_ID: Acetate_kinase; acetate kinase 865523..866752 Bifidobacterium adolescentis ATCC 15703 4557193 YP_909553.1 CDS BAD_0690 NC_008618.1 866968 868788 D COG family: predicted acyltransferases; Orthologue of BL0962; membrane protein with acetylase function 866968..868788 Bifidobacterium adolescentis ATCC 15703 4557085 YP_909554.1 CDS pbuX NC_008618.1 868909 870300 R COG family: xanthine_uracil permeases; Orthologue of BL0892; PFAM_ID: xan_ur_permease; xanthine/uracil permease complement(868909..870300) Bifidobacterium adolescentis ATCC 15703 4556545 YP_909555.1 CDS xpt NC_008618.1 870345 871049 R Catalyzes the transfer of the phosphoribosyl moiety from 5-phospho--D-ribosyl-1-pyrophosphate (PRib-PP) to the 6-oxo-guanine and -xanthine; xanthine phosphoribosyltransferase complement(870345..871049) Bifidobacterium adolescentis ATCC 15703 4556757 YP_909556.1 CDS uvrD1 NC_008618.1 871127 873766 D Orthologue of Rv0949_BL0890; ProbableuvrD1_ ATP dependent DNA helicase II (EC 3.6.1.-); ATP-dependent DNA helicase PcrA 871127..873766 Bifidobacterium adolescentis ATCC 15703 4556742 YP_909557.1 CDS BAD_0694 NC_008618.1 873903 874301 D Orthologue of BL0889; hypothetical protein 873903..874301 Bifidobacterium adolescentis ATCC 15703 4557086 YP_909558.1 CDS BAD_0695 NC_008618.1 874294 875514 D COG family: ABC-type transport systems_ involved inlipoprotein release_ permease components; Orthologue of BL0888; PFAM_ID: DUF214; hypothetical protein 874294..875514 Bifidobacterium adolescentis ATCC 15703 4557087 YP_909559.1 CDS BAD_0696 NC_008618.1 875514 876329 D COG family: ABC-type transport systems_ involved inlipoprotein release_ ATPase components; Orthologue of BL0887; PFAM_ID: ABC_tran; ABC transporter ATP-binding protein 875514..876329 Bifidobacterium adolescentis ATCC 15703 4557088 YP_909560.1 CDS rpsD NC_008618.1 876599 877225 D primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 876599..877225 Bifidobacterium adolescentis ATCC 15703 4556650 YP_909561.1 CDS BAD_0698 NC_008618.1 877360 878043 D COG family: phosphoglyceratemutase_fructose-2_6- bisphosphatase; Orthologue of BL0884; PFAM_ID: PGAM; hypothetical protein 877360..878043 Bifidobacterium adolescentis ATCC 15703 4557089 YP_909562.1 CDS BAD_0699 NC_008618.1 878130 878519 D Identified by sequence similarity; Orthologue of Lxx10890; secreted protein 878130..878519 Bifidobacterium adolescentis ATCC 15703 4557090 YP_909563.1 CDS alaS NC_008618.1 878844 881522 D Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 878844..881522 Bifidobacterium adolescentis ATCC 15703 4557202 YP_909564.1 CDS BAD_0701 NC_008618.1 881533 881988 D COG family: predicted endonuclease involved inrecombination (possible holliday junction resolvase inmycoplasmas and B. subtilis); Orthologue of BL0881; putative Holliday junction resolvase 881533..881988 Bifidobacterium adolescentis ATCC 15703 4557091 YP_909565.1 CDS BAD_0702 NC_008618.1 882003 883190 D COG family: predicted periplasmic solute-bindingprotein; Orthologue of BL0880; PFAM_ID: DUF175; hypothetical protein 882003..883190 Bifidobacterium adolescentis ATCC 15703 4557092 YP_909566.1 CDS rne NC_008618.1 883225 883686 D Orthologue of XOO3073; ribonuclease E 883225..883686 Bifidobacterium adolescentis ATCC 15703 4556665 YP_909567.1 CDS aroC NC_008618.1 883723 884916 D catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 883723..884916 Bifidobacterium adolescentis ATCC 15703 4557404 YP_909568.1 CDS aroK NC_008618.1 884925 886553 D catalyzes the formation of shikimate 3-phosphate from shikimate and the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; bifunctional shikimate kinase/3-dehydroquinate synthase 884925..886553 Bifidobacterium adolescentis ATCC 15703 4557403 YP_909569.1 CDS aroQ NC_008618.1 886590 887039 D catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 886590..887039 Bifidobacterium adolescentis ATCC 15703 4557683 YP_909570.1 CDS amyA4 NC_008618.1 887201 888472 D Orthologue of SAV5981; putative alpha-amylase 887201..888472 Bifidobacterium adolescentis ATCC 15703 4557210 YP_909571.1 CDS pulA NC_008618.1 889023 894302 D Orthologue of BCZK2463; pullulanase 889023..894302 Bifidobacterium adolescentis ATCC 15703 4556689 YP_909572.1 CDS pyrG NC_008618.1 894426 896087 D CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 894426..896087 Bifidobacterium adolescentis ATCC 15703 4556610 YP_909573.1 CDS BAD_0710 NC_008618.1 896246 897766 D Orthologue of Tfu_1987_BL0872; ABC transporter 896246..897766 Bifidobacterium adolescentis ATCC 15703 4557093 YP_909574.1 CDS BAD_0711 NC_008618.1 897763 898995 D COG family: predicted membrane components of anuncharacterized iron-regulated ABC-type transporter SufB; Orthologue of BL0871_Tfu_1987; PFAM_ID: UPF0051; ABC transporter 897763..898995 Bifidobacterium adolescentis ATCC 15703 4557094 YP_909575.1 CDS BAD_0712 NC_008618.1 899011 899790 D COG family: iron-regulated ABC transporter ATPasesubunit SufC; Identified by sequence similarity; Orthologue of BL0870; PFAM_ID: ABC_tran; ABC transporter ATP-binding protein 899011..899790 Bifidobacterium adolescentis ATCC 15703 4557095 YP_909576.1 CDS BAD_0713 NC_008618.1 899787 901061 D COG family: iron-regulated ABC transporter ATPasesubunit SufC; Orthologue of BL0869; PFAM_ID: ABC_tran; NifS-like aminotransferase 899787..901061 Bifidobacterium adolescentis ATCC 15703 4557096 YP_909577.1 CDS BAD_0714 NC_008618.1 901068 901619 D COG family: NifU homologs involved in Fe-S clusterformation; Orthologue of BL0868; PFAM_ID: NifU_N; hypothetical protein 901068..901619 Bifidobacterium adolescentis ATCC 15703 4557309 YP_909578.1 CDS BAD_0715 NC_008618.1 901724 902311 D COG family: putative aromatic ring hydroxylatingenzyme; Orthologue of BL0867; PFAM_ID: DUF59; hypothetical protein 901724..902311 Bifidobacterium adolescentis ATCC 15703 4557310 YP_909579.1 CDS glgC NC_008618.1 902429 903673 R catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate; glucose-1-phosphate adenylyltransferase complement(902429..903673) Bifidobacterium adolescentis ATCC 15703 4557708 YP_909580.1 CDS tnsR NC_008618.1 903853 904731 R COG family: rRNA methylases; Orthologue of BL0865; PFAM_ID:SpoU_methylase; tRNA/rRNA methyltransferase complement(903853..904731) Bifidobacterium adolescentis ATCC 15703 4557655 YP_909581.1 CDS BAD_0718 NC_008618.1 905008 905805 D in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 905008..905805 Bifidobacterium adolescentis ATCC 15703 4557311 YP_909582.1 CDS BAD_0719 NC_008618.1 905900 906235 D COG family: diadenosine tetraphosphate (Ap4A)hydrolase and other Hit family hydrolases; Orthologue of BL0863; PFAM_ID: HIT; hypothetical protein 905900..906235 Bifidobacterium adolescentis ATCC 15703 4557312 YP_909583.1 CDS BAD_0720 NC_008618.1 906280 907413 D COG family: phosphate starvation-inducible proteinPhoH_ predicted ATPase; Orthologue of BL0862; PFAM_ID: PhoH; PhoH-like protein 906280..907413 Bifidobacterium adolescentis ATCC 15703 4557313 YP_909584.1 CDS BAD_0721 NC_008618.1 907414 907959 D COG family: predicted metal-dependent hydrolase; Orthologue of BL0861; PFAM_ID: UPF0054; putative metalloprotease 907414..907959 Bifidobacterium adolescentis ATCC 15703 4557314 YP_909585.1 CDS BAD_0722 NC_008618.1 908008 909426 D COG family: uncharacterized CBS domain-containingproteins; Orthologue of BL0860; PFAM_ID: CBS; hypothetical protein 908008..909426 Bifidobacterium adolescentis ATCC 15703 4557315 YP_909586.1 CDS era NC_008618.1 909419 910417 D Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 909419..910417 Bifidobacterium adolescentis ATCC 15703 4556270 YP_909587.1 CDS fadD2 NC_008618.1 910611 912647 R COG family: long-chain acyl-CoA synthetases(AMP-forming); Orthologue of BL0858; PFAM_ID: AMP-binding; long-chain-fatty-acid-CoA ligase complement(910611..912647) Bifidobacterium adolescentis ATCC 15703 4556959 YP_909588.1 CDS pntA NC_008618.1 912883 914028 D COG family: NAD_NADP transhydrogenase alphasubunit; Orthologue of BL0857; PFAM_ID: AlaDh_PNT; Pyridine nucleotide transhydrogenase subunit alpha1; NAD(P) transhydrogenase subunit alpha part 1 912883..914028 Bifidobacterium adolescentis ATCC 15703 4556538 YP_909589.1 CDS pntB NC_008618.1 914339 915784 D COG family: NAD_NADP transhydrogenase beta subunit; Orthologue of BL0856; PFAM_ID: PNTB; Pyridine nucleotide transhydrogenase subunit beta; NAD(P) transhydrogenase subunit beta 914339..915784 Bifidobacterium adolescentis ATCC 15703 4556539 YP_909590.1 CDS BAD_0727 NC_008618.1 915985 917358 D Orthologue of BP2948; Similar to Escherichia coli riboflavin biosynthesis protein (diamino hydroxyphospho ribosylaminopyrimidinedeaminase); putative riboflavin-specific deaminase 915985..917358 Bifidobacterium adolescentis ATCC 15703 4557316 YP_909591.1 CDS BAD_0728 NC_008618.1 917477 918826 D Orthologue of BT1387; putative Na+-driven multidrug efflux pump 917477..918826 Bifidobacterium adolescentis ATCC 15703 4557317 YP_909592.1 CDS ydfL NC_008618.1 918823 919683 D Orthologue of BSU05460; Similar to multidrug-efflux transporter regulator; hypothetical protein 918823..919683 Bifidobacterium adolescentis ATCC 15703 4556769 YP_909593.1 CDS BAD_0730 NC_008618.1 919707 920105 R hypothetical protein complement(919707..920105) Bifidobacterium adolescentis ATCC 15703 4557318 YP_909594.1 CDS BAD_0731 NC_008618.1 920471 920878 D Orthologue of BF2138; Similar to Mycoplasma penetrans hypothetical protein mype1860; hypothetical protein 920471..920878 Bifidobacterium adolescentis ATCC 15703 4557319 YP_909595.1 CDS BAD_0732 NC_008618.1 920979 921530 D Orthologue of SCO7639; Probable marR-family regulatory protein; MarR family regulatory protein 920979..921530 Bifidobacterium adolescentis ATCC 15703 4557320 YP_909596.1 CDS BAD_0733 NC_008618.1 921527 922903 D EmrB/QacA family protein; Identified by match to protein family HMM PF07690; Orthologue of BTH_II2230; putative drug resistance transporter 921527..922903 Bifidobacterium adolescentis ATCC 15703 4557321 YP_909597.1 CDS crcB2 NC_008618.1 923045 923590 D COG family: integral membrane protein possiblyinvolved in chromosome condensation; Orthologue of BL1091; PFAM_ID: CRCB; CrcB-like protein 923045..923590 Bifidobacterium adolescentis ATCC 15703 4557578 YP_909598.1 CDS crcB3 NC_008618.1 923590 923964 D COG family: integral membrane protein possiblyinvolved in chromosome condensation; Orthologue of BL1092; PFAM_ID: CRCB; CrcB-like protein 923590..923964 Bifidobacterium adolescentis ATCC 15703 4557579 YP_909599.1 CDS BAD_0736 NC_008618.1 924139 924762 D Orthologue of BL0695; hypothetical protein 924139..924762 Bifidobacterium adolescentis ATCC 15703 4557322 YP_909600.1 CDS BAD_0737 NC_008618.1 924762 925448 D COG family: ABC-type cobalt transport system_permease component CbiQ and related transporters; Orthologue of BL0694; PFAM_ID:CbiQ; cobalt ABC transporter permease 924762..925448 Bifidobacterium adolescentis ATCC 15703 4557323 YP_909601.1 CDS BAD_0738 NC_008618.1 925442 926989 D COG family: ABC-type cobalt transport system_ATPase component; Orthologue of BL0693; PFAM_ID: ABC_tran; PFAM_ID: PRK; ABC transporter ATP-binding protein 925442..926989 Bifidobacterium adolescentis ATCC 15703 4557324 YP_909602.1 CDS BAD_0739 NC_008618.1 926974 927642 D Orthologue of BL0692; hypothetical protein 926974..927642 Bifidobacterium adolescentis ATCC 15703 4557325 YP_909603.1 CDS BAD_0740 NC_008618.1 927670 930222 R Orthologue of BL1083_LBA1002; UvrA; excinuclease subunit A complement(927670..930222) Bifidobacterium adolescentis ATCC 15703 4557326 YP_909604.1 CDS BAD_0741 NC_008618.1 930763 931764 R COG family: hydrolases of the alpha_betasuperfamily; Orthologue of BL0855; hypothetical protein complement(930763..931764) Bifidobacterium adolescentis ATCC 15703 4557327 YP_909605.1 CDS rplY NC_008618.1 932020 932634 D the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc 932020..932634 Bifidobacterium adolescentis ATCC 15703 4556497 YP_909606.1 CDS ilvE NC_008618.1 932882 934009 D catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 932882..934009 Bifidobacterium adolescentis ATCC 15703 4556216 YP_909607.1 CDS BAD_0744 NC_008618.1 934165 934944 D COG family: predicted membrane protein; Orthologue of BL0850; hypothetical protein 934165..934944 Bifidobacterium adolescentis ATCC 15703 4556823 YP_909608.1 CDS rpsT NC_008618.1 935033 935293 R binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 complement(935033..935293) Bifidobacterium adolescentis ATCC 15703 4557610 YP_909609.1 CDS lepA NC_008618.1 935591 937330 D binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 935591..937330 Bifidobacterium adolescentis ATCC 15703 4556277 YP_909610.1 CDS hemN NC_008618.1 937338 938501 D COGfamily: coproporphyrinogen III oxidase and related FeSoxidoreductases; Orthologue of BL0847; PFAM_ID: Coprogen_an_ox; coproporphyrinogenase; oxygen-independent coproporphyrinogen III oxidase 937338..938501 Bifidobacterium adolescentis ATCC 15703 4556148 YP_909611.1 CDS gltB NC_008618.1 938638 943284 D Orthologue of Rv3859c_BL0834; ProbablegltB_ ferredoxin-dependent glutamate synthase largesubunit (EC 1.4.1.13); glutamate synthase [NADPH] large subunit 938638..943284 Bifidobacterium adolescentis ATCC 15703 4556156 YP_909612.1 CDS gltD NC_008618.1 943286 944833 D glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta 943286..944833 Bifidobacterium adolescentis ATCC 15703 4556157 YP_909613.1 CDS BAD_0750 NC_008618.1 944955 945416 D Orthologue of BL0827; hypothetical protein 944955..945416 Bifidobacterium adolescentis ATCC 15703 4556824 YP_909614.1 CDS glgA NC_008618.1 945457 946908 D COG family: predicted glycosyltransferases; Orthologue of BL0826; PFAM_ID: Glycos_transf_1; glycosyltransferase 945457..946908 Bifidobacterium adolescentis ATCC 15703 4557706 YP_909615.1 CDS BAD_0752 NC_008618.1 946991 947896 D COG family: ABC-type molybdenum transport system_ATPase component_photorepair protein PhrA; Orthologue of BL0825; PFAM_ID:ABC_tran; ABC transporter ATP-binding protein 946991..947896 Bifidobacterium adolescentis ATCC 15703 4556825 YP_909616.1 CDS BAD_0753 NC_008618.1 948057 949112 D COG family: predicted SAM-dependentmethyltransferase involved in tRNA-met maturation; Orthologue of BL0800; hypothetical protein 948057..949112 Bifidobacterium adolescentis ATCC 15703 4556826 YP_909617.1 CDS BAD_0754 NC_008618.1 949127 949771 D COG family: phosphohistidine phosphatase SixA; Orthologue of BL0799; PFAM_ID: PGAM; hypothetical protein 949127..949771 Bifidobacterium adolescentis ATCC 15703 4556827 YP_909618.1 CDS BAD_0755 NC_008618.1 949854 950306 D Orthologue of BF1907; Similar to Mycoplasma penetrans hypothetical protein mype1860; hypothetical protein 949854..950306 Bifidobacterium adolescentis ATCC 15703 4556828 YP_909619.1 CDS metE NC_008618.1 950488 952794 D catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 950488..952794 Bifidobacterium adolescentis ATCC 15703 4556409 YP_909620.1 CDS metF NC_008618.1 952837 953676 D COG family: 5_10- methylenetetrahydrofolatereductase; Orthologue of BL0797; PFAM_ID: MTHFR; 5,10-methylenetetrahydrofolate reductase 952837..953676 Bifidobacterium adolescentis ATCC 15703 4556410 YP_909621.1 CDS glnE NC_008618.1 953768 956878 D catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 953768..956878 Bifidobacterium adolescentis ATCC 15703 4557715 YP_909622.1 CDS pyrB NC_008618.1 956987 958000 D catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 956987..958000 Bifidobacterium adolescentis ATCC 15703 4556605 YP_909623.1 CDS pyrI NC_008618.1 957997 958419 D involved in the allosteric regulation of aspartate carbamoyltransferase; aspartate carbamoyltransferase regulatory subunit 957997..958419 Bifidobacterium adolescentis ATCC 15703 4556612 YP_909624.1 CDS pyrC NC_008618.1 958424 959842 D COG family: dihydroorotase; Orthologue of BL0792; PFAM_ID:Dihydroorotase; dihydroorotase 958424..959842 Bifidobacterium adolescentis ATCC 15703 4556606 YP_909625.1 CDS pyrF NC_008618.1 959842 960804 D COG family:orotidine-5'-phosphate decarboxylase; OMP decarboxylase; Orthologue of BL0791; orotidine 5'-phosphate decarboxylase 959842..960804 Bifidobacterium adolescentis ATCC 15703 4556609 YP_909626.1 CDS pyrK NC_008618.1 960844 961662 D COG family: 2-polyprenylphenolhydroxylase and related flavodoxin oxidoreductases; Orthologue of BL0790; PFAM_ID: FAD_binding_6; dihydroorotate dehydrogenase electron transfer subunit 960844..961662 Bifidobacterium adolescentis ATCC 15703 4556613 YP_909627.1 CDS pyrD NC_008618.1 961665 962612 D COG family: dihydroorotate dehydrogenase; Orthologue of BL0789; PFAM_ID: DHOdehase; dihydroorotate dehydrogenase 961665..962612 Bifidobacterium adolescentis ATCC 15703 4556607 YP_909628.1 CDS pyrE NC_008618.1 962649 963344 D involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 962649..963344 Bifidobacterium adolescentis ATCC 15703 4556608 YP_909629.1 CDS cpsY NC_008618.1 963464 963979 R COG family: transcriptional regulator; Orthologue of BL0786_C-terminal fragment; PFAM_ID: HTH_1; LysR-type transcriptional regulator complement(963464..963979) Bifidobacterium adolescentis ATCC 15703 4557574 YP_909630.1 CDS cpsY NC_008618.1 963928 964386 R COG family: transcriptional regulator; Orthologue of BL0786_N-terminal fragment; PFAM_ID: HTH_1; LysR-type transcriptional regulator complement(963928..964386) Bifidobacterium adolescentis ATCC 15703 4557575 YP_909631.1 CDS BAD_0768 NC_008618.1 964548 965327 R COG family: predicted hydrolases of the Hadsuperfamily; Orthologue of BL0785; PFAM_ID: Hydrolase; alpha beta hydrolase complement(964548..965327) Bifidobacterium adolescentis ATCC 15703 4556829 YP_909632.1 CDS BAD_0769 NC_008618.1 965578 965871 R Identified by match to protein family HMM PF00657; Orthologue of SRU_2203; GDSL-like lipase/acylhydrolase domain-containing protein complement(965578..965871) Bifidobacterium adolescentis ATCC 15703 4556830 YP_909633.1 CDS BAD_0770 NC_008618.1 966459 969449 D Identified by match to protein family HMM PF02687;match to protein family HMM TIGR01612; Orthologue of LMOf2365_1233; Permease protein; ABC transporter 966459..969449 Bifidobacterium adolescentis ATCC 15703 4556831 YP_909634.1 CDS BAD_0771 NC_008618.1 969465 971240 R COG family: predicted sugar kinase; Orthologue of BL0784; PFAM_ID:UPF0031; hypothetical protein complement(969465..971240) Bifidobacterium adolescentis ATCC 15703 4556832 YP_909635.1 CDS BAD_0772 NC_008618.1 971347 972048 D ATP-binding protein; Orthologue of SP1653; ABC transporter 971347..972048 Bifidobacterium adolescentis ATCC 15703 4556833 YP_909636.1 CDS BAD_0773 NC_008618.1 972927 973550 D COG family: membrane proteins related tometalloendopeptidases; Orthologue of BL1497; PFAM_ID: Peptidase_M37; hypothetical protein 972927..973550 Bifidobacterium adolescentis ATCC 15703 4556834 YP_909637.1 CDS fadD4 NC_008618.1 973664 975493 D COG family: long-chain acyl-CoA synthetases(AMP-forming); Orthologue of BL1748; PFAM_ID: AMP-binding; long-chain-fatty-acid--CoA ligase 973664..975493 Bifidobacterium adolescentis ATCC 15703 4556961 YP_909638.1 CDS BAD_0775 NC_008618.1 975584 977092 R COG family: periplasmic sugar-binding proteins; Orthologue of BL1498; hypothetical protein complement(975584..977092) Bifidobacterium adolescentis ATCC 15703 4556835 YP_909639.1 CDS icd1 NC_008618.1 977214 978434 R NADP; Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase complement(977214..978434) Bifidobacterium adolescentis ATCC 15703 4556187 YP_909640.1 CDS BAD_0777 NC_008618.1 978549 979688 D catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5-monophosphate dehydrogenase 978549..979688 Bifidobacterium adolescentis ATCC 15703 4556836 YP_909641.1 CDS BAD_0778 NC_008618.1 979836 980486 D Identified by sequence similarity; Orthologue of Atu4275; hypothetical protein 979836..980486 Bifidobacterium adolescentis ATCC 15703 4556837 YP_909642.1 CDS fadD3 NC_008618.1 980604 982643 D COG family: long-chain acyl-CoA synthetases(AMP-forming); Orthologue of BL1501; PFAM_ID: AMP-binding; long-chain-fatty acid CoA ligase 980604..982643 Bifidobacterium adolescentis ATCC 15703 4556960 YP_909643.1 CDS def2 NC_008618.1 982811 983131 D COG family:N-formylmethionyl-tRNA deformylase; Orthologue of BL1502; PFAM_ID:Pep_deformylase; formylmethionine deformylase; peptide deformylase 2 982811..983131 Bifidobacterium adolescentis ATCC 15703 4556247 YP_909644.1 CDS rpsB NC_008618.1 983318 984211 D one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 983318..984211 Bifidobacterium adolescentis ATCC 15703 4556648 YP_909645.1 CDS tsf NC_008618.1 984287 985162 D EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 984287..985162 Bifidobacterium adolescentis ATCC 15703 4556730 YP_909646.1 CDS pyrH NC_008618.1 985342 986091 D Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 985342..986091 Bifidobacterium adolescentis ATCC 15703 4556611 YP_909647.1 CDS frr NC_008618.1 986144 986698 D Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 986144..986698 Bifidobacterium adolescentis ATCC 15703 4556977 YP_909648.1 CDS cdsA NC_008618.1 987085 987741 D CDP-diglyceride synthetase; COGfamily: CDP-diglyceride synthetase; Orthologue of BL1507; PFAM_ID:Cytidylyltrans; phosphatidate cytidylyltransferase 987085..987741 Bifidobacterium adolescentis ATCC 15703 4557563 YP_909649.1 CDS BAD_0786 NC_008618.1 987767 988927 D 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N 987767..988927 Bifidobacterium adolescentis ATCC 15703 4556838 YP_909650.1 CDS hisF NC_008618.1 989042 989812 D catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 989042..989812 Bifidobacterium adolescentis ATCC 15703 4556155 YP_909651.1 CDS hisI NC_008618.1 989876 990283 D PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers; phosphoribosyl-AMP cyclohydrolase 989876..990283 Bifidobacterium adolescentis ATCC 15703 4556177 YP_909652.1 CDS trpE NC_008618.1 990280 991836 D Catalyzes the formation of anthranilate andglutamate from chorismate and glutamine; Orthologue of BL0687; anthranilate synthase component I 990280..991836 Bifidobacterium adolescentis ATCC 15703 4556722 YP_909653.1 CDS trpBC NC_008618.1 991880 993973 D catalyzes ring closure to form indole-3-glycerol phosphate; catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; bifunctional indole-3-glycerol phosphate synthase/tryptophan synthase subunit beta 991880..993973 Bifidobacterium adolescentis ATCC 15703 4556720 YP_909654.1 CDS trpA NC_008618.1 993991 994866 D catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 993991..994866 Bifidobacterium adolescentis ATCC 15703 4556719 YP_909655.1 CDS lgt NC_008618.1 994936 995946 D transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 994936..995946 Bifidobacterium adolescentis ATCC 15703 4556288 YP_909656.1 CDS rpe NC_008618.1 995972 996646 D catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate; ribulose-phosphate 3-epimerase 995972..996646 Bifidobacterium adolescentis ATCC 15703 4556669 YP_909657.1 CDS hisE NC_008618.1 996643 996939 D catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis; phosphoribosyl-ATP pyrophosphatase 996643..996939 Bifidobacterium adolescentis ATCC 15703 4556154 YP_909658.1 CDS hisG NC_008618.1 996991 997842 D long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; ATP phosphoribosyltransferase 996991..997842 Bifidobacterium adolescentis ATCC 15703 4556175 YP_909659.1 CDS pgsA NC_008618.1 997856 998467 D COG family: phosphatidylglycerophosphatesynthase; Orthologue of BL0750; PFAM_ID: CDP-OH_P_transf; Phosphatidylglycerophosphate synthase; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 997856..998467 Bifidobacterium adolescentis ATCC 15703 4556526 YP_909660.1 CDS BAD_0797 NC_008618.1 998475 999446 D Orthologue of BL0749; hypothetical protein 998475..999446 Bifidobacterium adolescentis ATCC 15703 4556839 YP_909661.1 CDS BAD_0798 NC_008618.1 999446 999778 D Orthologue of BL0748a; hypothetical protein 999446..999778 Bifidobacterium adolescentis ATCC 15703 4556840 YP_909662.1 CDS BAD_0799 NC_008618.1 999785 1000612 D Orthologue of BL0748; hypothetical protein 999785..1000612 Bifidobacterium adolescentis ATCC 15703 4556841 YP_909663.1 CDS thrS NC_008618.1 1000672 1002807 D catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 1000672..1002807 Bifidobacterium adolescentis ATCC 15703 4557645 YP_909664.1 CDS BAD_0801 NC_008618.1 1002921 1003583 D Orthologue of PPA1078; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1002921..1003583 Bifidobacterium adolescentis ATCC 15703 4556842 YP_909665.1 CDS BAD_0802 NC_008618.1 1003699 1004469 D COG family: uncharacterized Acr; Orthologue of BL0726; PFAM_ID: DUF28; hypothetical protein 1003699..1004469 Bifidobacterium adolescentis ATCC 15703 4557097 YP_909666.1 CDS ruvC NC_008618.1 1004476 1005057 D endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 1004476..1005057 Bifidobacterium adolescentis ATCC 15703 4556703 YP_909667.1 CDS ruvA NC_008618.1 1005105 1005722 D COG family: holliday junction resolvasomeDNA-binding subunit; Orthologue of BL0728; PFAM_ID: RuvA; PFAM_ID: RuvA_II; holliday junction ATP-dependent DNA helicase ruvA 1005105..1005722 Bifidobacterium adolescentis ATCC 15703 4556701 YP_909668.1 CDS ruvB NC_008618.1 1005719 1006807 D promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 1005719..1006807 Bifidobacterium adolescentis ATCC 15703 4556702 YP_909669.1 CDS BAD_0806 NC_008618.1 1006864 1007277 D COG family: preprotein translocase subunit YajC; Orthologue of BL0730; PFAM_ID: DUF219; hypothetical protein 1006864..1007277 Bifidobacterium adolescentis ATCC 15703 4557098 YP_909670.1 CDS apt NC_008618.1 1007393 1007974 D catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 1007393..1007974 Bifidobacterium adolescentis ATCC 15703 4557211 YP_909671.1 CDS sucC NC_008618.1 1008026 1009213 D COG family: succinyl-CoA synthetasebeta subunit; Orthologue of BL0732; PFAM_ID: ATP-grasp; PFAM_ID: ligase-CoA; succinyl-CoA synthetase beta chain 1008026..1009213 Bifidobacterium adolescentis ATCC 15703 4556455 YP_909672.1 CDS sucD NC_008618.1 1009215 1010138 D Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha 1009215..1010138 Bifidobacterium adolescentis ATCC 15703 4556456 YP_909673.1 CDS BAD_0810 NC_008618.1 1010138 1011523 D Orthologue of BL0734; hypothetical protein 1010138..1011523 Bifidobacterium adolescentis ATCC 15703 4557099 YP_909674.2 CDS purH NC_008618.1 1011471 1013099 D involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 1011471..1013099 Bifidobacterium adolescentis ATCC 15703 4556697 YP_909675.1 CDS BAD_0812 NC_008618.1 1013454 1014389 R COG family: glycerol uptake facilitator and relatedpermeases (major intrinsic protein family); Orthologue of BL0736; PFAM_ID: MIP; membrane channel protein complement(1013454..1014389) Bifidobacterium adolescentis ATCC 15703 4557100 YP_909676.1 CDS BAD_0813 NC_008618.1 1014478 1014738 R Orthologue of BP2096; putative fatty-acyl-CoA racemase complement(1014478..1014738) Bifidobacterium adolescentis ATCC 15703 4557101 YP_909677.1 CDS BAD_0814 NC_008618.1 1014880 1015104 R Orthologue of SAV1; hypothetical protein complement(1014880..1015104) Bifidobacterium adolescentis ATCC 15703 4557102 YP_909678.1 CDS engA NC_008618.1 1015374 1017401 D CMK catalyzes the formation of (d)CDP from ATP and (d)CMP; the function of the GTP-binding domain EngA appears to be in synchronizing cellular events by interacting with multiple cellular targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide-binding affinities in the two binding domains; bifunctional cytidylate kinase/GTP-binding protein 1015374..1017401 Bifidobacterium adolescentis ATCC 15703 4556268 YP_909679.1 CDS ugpA NC_008618.1 1018486 1019916 D Orthologue of BL0739; UDP-glucose pyrophosphorylase; UTP-glucose-1-phosphate uridylyltransferase 1018486..1019916 Bifidobacterium adolescentis ATCC 15703 4556735 YP_909680.1 CDS BAD_0817 NC_008618.1 1020059 1021972 D Orthologue of BL0741; hypothetical protein 1020059..1021972 Bifidobacterium adolescentis ATCC 15703 4557103 YP_909681.1 CDS BAD_0818 NC_008618.1 1022273 1024921 D Identified by sequence similarity; Orthologue of Lxx08340_BL0742; helicase 1022273..1024921 Bifidobacterium adolescentis ATCC 15703 4557104 YP_909682.1 CDS BAD_0819 NC_008618.1 1025030 1025377 D Orthologue of BL0743; hypothetical protein 1025030..1025377 Bifidobacterium adolescentis ATCC 15703 4557105 YP_909683.1 CDS BAD_0820 NC_008618.1 1025483 1026196 D COG family: predicted phosphatases; Orthologue of BL0744; PFAM_ID:Hydrolase; hydrolase or phosphatase 1025483..1026196 Bifidobacterium adolescentis ATCC 15703 4557106 YP_909684.1 CDS BAD_0821 NC_008618.1 1026377 1026622 R Functions in anaerobic transport ofC4-dicarboxylate compounds such as fumarate; Orthologue of MTH934_ECs5105; anaerobic C4-dicarboxylate transport protein complement(1026377..1026622) Bifidobacterium adolescentis ATCC 15703 4557107 YP_909685.1 CDS BAD_0822 NC_008618.1 1026761 1027405 R COG family: predicted transcriptional regulators; Orthologue of BL0746; hypothetical protein complement(1026761..1027405) Bifidobacterium adolescentis ATCC 15703 4557108 YP_909686.1 CDS garA NC_008618.1 1027539 1027976 R COG family: FHA-domain-containing proteins; Orthologue of BL0747; PFAM_ID: FHA; signal transduction protein complement(1027539..1027976) Bifidobacterium adolescentis ATCC 15703 4557245 YP_909687.1 CDS BAD_0824 NC_008618.1 1029300 1030127 D Orthologue of BL0722; hypothetical protein 1029300..1030127 Bifidobacterium adolescentis ATCC 15703 4557109 YP_909688.1 CDS bacA NC_008618.1 1030220 1031104 R phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase complement(1030220..1031104) Bifidobacterium adolescentis ATCC 15703 4557546 YP_909689.1 CDS BAD_0826 NC_008618.1 1031273 1032064 D COG family: uncharacterized Bcr; Orthologue of BL0720; hypothetical protein 1031273..1032064 Bifidobacterium adolescentis ATCC 15703 4557110 YP_909690.1 CDS dnaJ NC_008618.1 1032173 1033324 R COG family: molecular chaperones (containC-terminal Zn finger domain); Orthologue of BL0719; PFAM_ID: DnaJ; PFAM_ID: DnaJ_C; PFAM_ID:DnaJ_CXXCXGXG; chaperone protein DnaJ complement(1032173..1033324) Bifidobacterium adolescentis ATCC 15703 4556254 YP_909691.1 CDS hrcA NC_008618.1 1033377 1034504 R Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor complement(1033377..1034504) Bifidobacterium adolescentis ATCC 15703 4556181 YP_909692.1 CDS tkt NC_008618.1 1034879 1036987 D catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 1034879..1036987 Bifidobacterium adolescentis ATCC 15703 4557651 YP_909693.1 CDS tal NC_008618.1 1037077 1038180 D catalyzes the reversible formation of D-erythrose 4-phosphate and D-fructose 6-phosphate from sedoheptulose 7-phosphate and D-glyceraldehyde 3-phosphate; transaldolase 1037077..1038180 Bifidobacterium adolescentis ATCC 15703 4556460 YP_909694.1 CDS BAD_0831 NC_008618.1 1038351 1039883 R in Corynebacterium glutamicum the aminotransferase can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; this protein contains a helix-turn-helix domain at the N-terminus; bifunctional HTH-domain containing protein/aminotransferase complement(1038351..1039883) Bifidobacterium adolescentis ATCC 15703 4557111 YP_909695.1 CDS BAD_0832 NC_008618.1 1040038 1040886 R COG family: predicted hydrolases of the Hadsuperfamily; Orthologue of BL0711; hypothetical protein complement(1040038..1040886) Bifidobacterium adolescentis ATCC 15703 4557112 YP_909696.1 CDS secG NC_008618.1 1040974 1041276 R Orthologue of BL0709; preprotein translocase subunit SecG complement(1040974..1041276) Bifidobacterium adolescentis ATCC 15703 4556709 YP_909697.1 CDS tpiA NC_008618.1 1041321 1042115 R Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase complement(1041321..1042115) Bifidobacterium adolescentis ATCC 15703 4557658 YP_909698.1 CDS pgk NC_008618.1 1042241 1043446 R Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase complement(1042241..1043446) Bifidobacterium adolescentis ATCC 15703 4556563 YP_909699.1 CDS BAD_0836 NC_008618.1 1043578 1044528 R COG family: uncharacterized Bcr; Orthologue of BL0706; PFAM_ID: DUF199; hypothetical protein complement(1043578..1044528) Bifidobacterium adolescentis ATCC 15703 4557113 YP_909700.1 CDS BAD_0837 NC_008618.1 1044683 1045615 R COG family: predicted P-loop-containing kinase; Orthologue of BL0705; hypothetical protein complement(1044683..1045615) Bifidobacterium adolescentis ATCC 15703 4557114 YP_909701.1 CDS aroE NC_008618.1 1045615 1046553 R COG family: shikimate 5-dehydrogenase; Orthologue of BL0704; PFAM_ID: Shikimate_DH; shikimate 5-dehydrogenase complement(1045615..1046553) Bifidobacterium adolescentis ATCC 15703 4557405 YP_909702.1 CDS uvrC NC_008618.1 1046619 1048856 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C complement(1046619..1048856) Bifidobacterium adolescentis ATCC 15703 4556741 YP_909703.1 CDS uvrA NC_008618.1 1048958 1051945 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A complement(1048958..1051945) Bifidobacterium adolescentis ATCC 15703 4556739 YP_909704.1 CDS BAD_0841 NC_008618.1 1052021 1052887 R Orthologue of BL0700; hypothetical protein complement(1052021..1052887) Bifidobacterium adolescentis ATCC 15703 4557115 YP_909705.1 CDS BAD_0842 NC_008618.1 1053257 1056703 R Orthologue of BL0699; hypothetical protein complement(1053257..1056703) Bifidobacterium adolescentis ATCC 15703 4556505 YP_909706.1 CDS BAD_0843 NC_008618.1 1056715 1057554 R Orthologue of BL0698; hypothetical protein complement(1056715..1057554) Bifidobacterium adolescentis ATCC 15703 4556506 YP_909707.1 CDS BAD_0844 NC_008618.1 1057557 1059053 R Orthologue of BL0697; hypothetical protein complement(1057557..1059053) Bifidobacterium adolescentis ATCC 15703 4556507 YP_909708.1 CDS recJ NC_008618.1 1059467 1059763 D Orthologue of FTT0478c; Similar to RECJ_HAEIN (P45112)single-stranded-DNA-specific exonuclease from Haemophilusinfluenzae; single-stranded-DNA-specific exonuclease 1059467..1059763 Bifidobacterium adolescentis ATCC 15703 4556627 YP_909709.1 CDS BAD_0846 NC_008618.1 1059736 1059984 D Orthologue of PSHAa2974; protein TrkB involved in potassium or sodium transport 1059736..1059984 Bifidobacterium adolescentis ATCC 15703 4556508 YP_909710.1 CDS BAD_0847 NC_008618.1 1060075 1060443 D Orthologue of PPA1479; hypothetical protein 1060075..1060443 Bifidobacterium adolescentis ATCC 15703 4556509 YP_909711.1 CDS BAD_0848 NC_008618.1 1060732 1061742 R Orthologue of BL0760; hypothetical protein complement(1060732..1061742) Bifidobacterium adolescentis ATCC 15703 4556510 YP_909712.1 CDS BAD_0849 NC_008618.1 1062569 1062889 D Identified by Glimmer2; putative; Orthologue of BURPS1710b_2065; hypothetical protein 1062569..1062889 Bifidobacterium adolescentis ATCC 15703 4556511 YP_909713.1 CDS BAD_0850 NC_008618.1 1063234 1064022 R COG0488_ Uup_ ATPase components of ABC transporterswith duplicated ATPase domains.; Fused ATPase subunits; Orthologue of RSP_2895; putative ABC transporter complement(1063234..1064022) Bifidobacterium adolescentis ATCC 15703 4556512 YP_909714.1 CDS BAD_0851 NC_008618.1 1064544 1066145 D Orthologue of Tfu_1880_BL0689; ABC transporter ATP-binding protein 1064544..1066145 Bifidobacterium adolescentis ATCC 15703 4556513 YP_909715.1 CDS BAD_0852 NC_008618.1 1066246 1067271 R Identified by sequence similarity; Orthologue of Lxx01710; cation transporter complement(1066246..1067271) Bifidobacterium adolescentis ATCC 15703 4556514 YP_909716.1 CDS yxjG_1 NC_008618.1 1067326 1068537 D Orthologue of CPj0143; hypothetical protein 1067326..1068537 Bifidobacterium adolescentis ATCC 15703 4556781 YP_909717.1 CDS BAD_0854 NC_008618.1 1068635 1069438 R Orthologue of LBA0464; putative carboxymuconolactone decarboxylase complement(1068635..1069438) Bifidobacterium adolescentis ATCC 15703 4556515 YP_909718.1 CDS merR NC_008618.1 1069490 1069918 R MerR; Orthologue of Tfu_1384; regulatory protein complement(1069490..1069918) Bifidobacterium adolescentis ATCC 15703 4556365 YP_909719.1 CDS BAD_0856 NC_008618.1 1070175 1071125 R COG family: penicillin V acylase and relatedamidases; Conjugated bile acid hydrolase; Orthologue of BL0796; PFAM_ID: CBAH; choloylglycine hydrolase complement(1070175..1071125) Bifidobacterium adolescentis ATCC 15703 4556516 YP_909720.1 CDS gcp NC_008618.1 1071455 1072498 R in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; putative DNA-binding/iron metalloprotein/AP endonuclease complement(1071455..1072498) Bifidobacterium adolescentis ATCC 15703 4557249 YP_909721.1 CDS rimI NC_008618.1 1072495 1073037 R COG family: acetyltransferases; Orthologue of BL1456; PFAM_ID:Acetyltransf; ribosomal-protein-alanine N-acetyltransferase complement(1072495..1073037) Bifidobacterium adolescentis ATCC 15703 4556660 YP_909722.1 CDS BAD_0859 NC_008618.1 1073048 1073818 R COG family: inactive homologs of metal-dependentproteases_ putative molecular chaperones; Orthologue of BL1455; hypothetical protein complement(1073048..1073818) Bifidobacterium adolescentis ATCC 15703 4556517 YP_909723.1 CDS BAD_0860 NC_008618.1 1073923 1074495 R Orthologue of SAV4969; PF02367: Uncharacterised P-loop hydrolase UPF0079; hypothetical protein complement(1073923..1074495) Bifidobacterium adolescentis ATCC 15703 4556518 YP_909724.1 CDS BAD_0861 NC_008618.1 1074492 1075511 R COG family: DNA polymerase III delta subunit; Orthologue of BL1454; hypothetical protein complement(1074492..1075511) Bifidobacterium adolescentis ATCC 15703 4556519 YP_909725.1 CDS BAD_0862 NC_008618.1 1075515 1077227 R COG family: predicted multitransmembrane_metal-binding protein; Orthologue of BL1452; putative transmembrane protein related to ComA complement(1075515..1077227) Bifidobacterium adolescentis ATCC 15703 4556520 YP_909726.1 CDS BAD_0863 NC_008618.1 1077224 1077985 R COG family: DNA uptake protein and relatedDNA-binding proteins; Orthologue of BL1451; PFAM_ID: HHH; hypothetical protein complement(1077224..1077985) Bifidobacterium adolescentis ATCC 15703 4556521 YP_909727.1 CDS leuS NC_008618.1 1078131 1081103 R leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase complement(1078131..1081103) Bifidobacterium adolescentis ATCC 15703 4556281 YP_909728.1 CDS BAD_0865 NC_008618.1 1081176 1082060 R COG family: ABC-type amino acid transport system_periplasmic component; Orthologue of BL1449; PFAM_ID: SBP_bac_3; ABC transporter substrate-binding protein complement(1081176..1082060) Bifidobacterium adolescentis ATCC 15703 4556522 YP_909729.1 CDS corA NC_008618.1 1082066 1083016 R COG family: Mg2+ and Co2+ transporters; Orthologue of BL1448; PFAM_ID: CorA; magnesium/cobalt transporter CorA complement(1082066..1083016) Bifidobacterium adolescentis ATCC 15703 4557571 YP_909730.1 CDS BAD_0867 NC_008618.1 1083230 1084006 R COG family: phosphoglyceratemutase_fructose-2_6- bisphosphatase; Orthologue of BL1447; PFAM_ID: PGAM; phosphoglycerate mutase complement(1083230..1084006) Bifidobacterium adolescentis ATCC 15703 4556523 YP_909731.1 CDS BAD_0868 NC_008618.1 1084355 1085431 R Orthologue of BL1443; hypothetical protein complement(1084355..1085431) Bifidobacterium adolescentis ATCC 15703 4556524 YP_909732.1 CDS BAD_0869 NC_008618.1 1085539 1086234 R COG family: phosphoglyceratemutase_fructose-2_6- bisphosphatase; Orthologue of BL0966; PFAM_ID: PGAM; hypothetical protein complement(1085539..1086234) Bifidobacterium adolescentis ATCC 15703 4556999 YP_909733.1 CDS BAD_0870 NC_008618.1 1086408 1086815 R COG family: uncharacterized Acr (homolog of plantiojap proteins); Orthologue of BL0965; PFAM_ID: DUF143; hypothetical protein complement(1086408..1086815) Bifidobacterium adolescentis ATCC 15703 4557000 YP_909734.1 CDS glmU NC_008618.1 1086818 1088200 R forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase complement(1086818..1088200) Bifidobacterium adolescentis ATCC 15703 4557001 YP_909735.1 CDS BAD_0872 NC_008618.1 1088335 1088874 R Orthologue of HH0341; Similar to Campylobacter jejuni CJ1254; hypothetical protein complement(1088335..1088874) Bifidobacterium adolescentis ATCC 15703 4557002 YP_909736.1 CDS BAD_0873 NC_008618.1 1089005 1090012 D COG family: predicted oxidoreductases (related toaryl-alcohol dehydrogenases); Orthologue of BL0290; PFAM_ID: aldo_ket_red; reductase 1089005..1090012 Bifidobacterium adolescentis ATCC 15703 4557003 YP_909737.1 CDS BAD_0874 NC_008618.1 1090146 1091111 R Orthologue of spr0628; Probable transcriptional regulator; hypothetical protein complement(1090146..1091111) Bifidobacterium adolescentis ATCC 15703 4557004 YP_909738.1 CDS BAD_0875 NC_008618.1 1091550 1093583 D Identified by match to protein family HMM PF00571; Orthologue of DVU0445; hypothetical protein 1091550..1093583 Bifidobacterium adolescentis ATCC 15703 4557005 YP_909739.1 CDS BAD_0876 NC_008618.1 1093677 1094204 D Identified by Glimmer2; putative; Orthologue of BURPS1710b_A1396; hypothetical protein 1093677..1094204 Bifidobacterium adolescentis ATCC 15703 4557006 YP_909740.1 CDS BAD_0877 NC_008618.1 1094412 1094918 R Identified by Glimmer2; putative; Orthologue of BCE0996; hypothetical protein complement(1094412..1094918) Bifidobacterium adolescentis ATCC 15703 4557007 YP_909741.1 CDS BAD_0878 NC_008618.1 1095212 1096675 D Orthologue of CE1244; putative transposase 1095212..1096675 Bifidobacterium adolescentis ATCC 15703 4557008 YP_909742.1 CDS BAD_0879 NC_008618.1 1096668 1097450 D Orthologue of CE1245; insertion element membrane protein 1096668..1097450 Bifidobacterium adolescentis ATCC 15703 4557009 YP_909743.1 CDS BAD_0880 NC_008618.1 1097541 1099199 R Orthologue of CPE1289; hypothetical protein complement(1097541..1099199) Bifidobacterium adolescentis ATCC 15703 4557010 YP_909744.1 CDS BAD_0881 NC_008618.1 1099526 1100227 R Orthologue of BB0913; Similar to Salmonella typhimurium type III restriction-modification system stylti enzyme res orstm0358 SWALL:T3RE_SALTY (SWALL:P40815); type III restriction enzyme complement(1099526..1100227) Bifidobacterium adolescentis ATCC 15703 4557011 YP_909745.1 CDS BAD_0882 NC_008618.1 1100477 1102573 R Orthologue of TWT151; hypothetical protein complement(1100477..1102573) Bifidobacterium adolescentis ATCC 15703 4557012 YP_909746.1 CDS BAD_0883 NC_008618.1 1102720 1105176 R Orthologue of y0750; hypothetical protein complement(1102720..1105176) Bifidobacterium adolescentis ATCC 15703 4557013 YP_909747.1 CDS BAD_0884 NC_008618.1 1105506 1106492 R Orthologue of DIP2252; Similar to Bacillus subtilis hypothetical 72.2 kDa protein YrhL; putative integral membrane protein complement(1105506..1106492) Bifidobacterium adolescentis ATCC 15703 4557014 YP_909748.1 CDS BAD_0885 NC_008618.1 1106708 1107151 D COG family: histone acetyltransferase Hpa2 andrelated acetyltransferases; Orthologue of BL0561; PFAM_ID: Acetyltransf; hypothetical protein 1106708..1107151 Bifidobacterium adolescentis ATCC 15703 4557015 YP_909749.1 CDS BAD_0886 NC_008618.1 1107665 1108684 D Hypothetical protein; Orthologue of bll1128; polyhydroxybutyrate depolymerase 1107665..1108684 Bifidobacterium adolescentis ATCC 15703 4557016 YP_909750.1 CDS BAD_0887 NC_008618.1 1108790 1109326 R Orthologue of PMM1692; p-aminobenzoate synthetase complement(1108790..1109326) Bifidobacterium adolescentis ATCC 15703 4557017 YP_909751.1 CDS BAD_0888 NC_008618.1 1109362 1109739 R Orthologue of pNG3054; hypothetical protein complement(1109362..1109739) Bifidobacterium adolescentis ATCC 15703 4556783 YP_909752.1 CDS BAD_0889 NC_008618.1 1109847 1110755 D Orthologue of BTH_I1000; MFS permease 1109847..1110755 Bifidobacterium adolescentis ATCC 15703 4556784 YP_909753.1 CDS BAD_0890 NC_008618.1 1110755 1112122 D COG family: ABC-type transport systems_ involved inlipoprotein release_ permease components; Orthologue of BL0269; PFAM_ID: DUF214; ABC transporter 1110755..1112122 Bifidobacterium adolescentis ATCC 15703 4556785 YP_909754.1 CDS BAD_0891 NC_008618.1 1112128 1113342 D COG family: ABC-type transport systems_ involved inlipoprotein release_ permease components; Orthologue of BL0268; PFAM_ID: DUF214; ABC transporter ATP-binding protein 1112128..1113342 Bifidobacterium adolescentis ATCC 15703 4556786 YP_909755.1 CDS BAD_0892 NC_008618.1 1113355 1113990 D COG family: ABC-type transport systems_ involved inlipoprotein release_ ATPase components; Orthologue of BL0267; PFAM_ID: ABC_tran; ABC transporter ATP-binding protein 1113355..1113990 Bifidobacterium adolescentis ATCC 15703 4556787 YP_909756.1 CDS BAD_0893 NC_008618.1 1114066 1114620 D Orthologue of BURPS1710b_A0691; hypothetical protein 1114066..1114620 Bifidobacterium adolescentis ATCC 15703 4556788 YP_909757.1 CDS BAD_0894 NC_008618.1 1115032 1115739 R Orthologue of BCE4987; hypothetical protein complement(1115032..1115739) Bifidobacterium adolescentis ATCC 15703 4556789 YP_909758.1 CDS BAD_0895 NC_008618.1 1115751 1116029 R Orthologue of GK2134; transcriptional regulator complement(1115751..1116029) Bifidobacterium adolescentis ATCC 15703 4556790 YP_909759.1 CDS yoaP NC_008618.1 1116253 1116759 D Orthologue of BSU18690 N-terminal fragment; hypothetical protein 1116253..1116759 Bifidobacterium adolescentis ATCC 15703 4556774 YP_909760.1 CDS yoaP NC_008618.1 1116539 1117000 D hypothetical protein 1116539..1117000 Bifidobacterium adolescentis ATCC 15703 4556775 YP_909761.1 CDS prsA2 NC_008618.1 1117235 1118254 R catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase complement(1117235..1118254) Bifidobacterium adolescentis ATCC 15703 4556594 YP_909762.1 CDS nadD NC_008618.1 1118369 1119097 R transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria; nicotinic acid mononucleotide adenylyltransferase complement(1118369..1119097) Bifidobacterium adolescentis ATCC 15703 4556383 YP_909763.1 CDS BAD_0900 NC_008618.1 1119112 1119705 R Orthologue of BL1033; hypothetical protein complement(1119112..1119705) Bifidobacterium adolescentis ATCC 15703 4556791 YP_909764.1 CDS proA NC_008618.1 1119729 1121012 R Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase complement(1119729..1121012) Bifidobacterium adolescentis ATCC 15703 4556586 YP_909765.1 CDS glyA NC_008618.1 1121147 1122448 R catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase complement(1121147..1122448) Bifidobacterium adolescentis ATCC 15703 4556168 YP_909766.1 CDS thrC NC_008618.1 1122750 1124237 D catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 1122750..1124237 Bifidobacterium adolescentis ATCC 15703 4557644 YP_909767.1 CDS BAD_0904 NC_008618.1 1124351 1125598 D Orthologue of lp_0893; multidrug transport protein 1124351..1125598 Bifidobacterium adolescentis ATCC 15703 4556792 YP_909768.1 CDS BAD_0905 NC_008618.1 1125629 1126168 D COG family: predicted transcriptional regulators; Orthologue of BL1041a; PFAM_ID: gntR; GntR family transcriptional regulator 1125629..1126168 Bifidobacterium adolescentis ATCC 15703 4556793 YP_909769.1 CDS BAD_0906 NC_008618.1 1126278 1126970 R COG family: predicted phosphatase_phosphohexomutase; Orthologue of BL1042; PFAM_ID: Hydrolase; hydrolyase complement(1126278..1126970) Bifidobacterium adolescentis ATCC 15703 4556794 YP_909770.1 CDS recN NC_008618.1 1127018 1128724 R COG family: ATPasesinvolved in DNA repair; Orthologue of BL1043; Recombination protein N; DNA repair protein RecN complement(1127018..1128724) Bifidobacterium adolescentis ATCC 15703 4556628 YP_909771.1 CDS ppnK NC_008618.1 1128731 1129675 R catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase complement(1128731..1129675) Bifidobacterium adolescentis ATCC 15703 4556580 YP_909772.1 CDS BAD_0909 NC_008618.1 1129914 1131377 D COG family: Trk-type K+ transport systems_ membranecomponents; Orthologue of BL1045; PFAM_ID: TrkH; hypothetical protein 1129914..1131377 Bifidobacterium adolescentis ATCC 15703 4556795 YP_909773.1 CDS BAD_0910 NC_008618.1 1131461 1132114 D COG family: K+ transport systems_ NAD-bindingcomponent; Orthologue of BL1046; PFAM_ID: KTN; PFAM_ID: TrkA; hypothetical protein 1131461..1132114 Bifidobacterium adolescentis ATCC 15703 4556796 YP_909774.1 CDS BAD_0911 NC_008618.1 1132211 1132966 R COG family: predicted rRNA methylases; Orthologue of BL1048; PFAM_ID: FtsJ; PFAM_ID: S4; hemolysin-like protein complement(1132211..1132966) Bifidobacterium adolescentis ATCC 15703 4556797 YP_909775.1 CDS BAD_0912 NC_008618.1 1132991 1134016 R COG family: predicted sugar phosphatases of the Hadsuperfamily; Orthologue of BL1049; PFAM_ID: Hydrolase; hypothetical protein complement(1132991..1134016) Bifidobacterium adolescentis ATCC 15703 4556798 YP_909776.1 CDS BAD_0913 NC_008618.1 1134031 1135770 R Orthologue of BL1050; hypothetical protein complement(1134031..1135770) Bifidobacterium adolescentis ATCC 15703 4556799 YP_909777.1 CDS tyrS NC_008618.1 1135830 1137137 R COG family:tyrosyl-tRNA synthetase; Orthologue of BL1051; PFAM_ID: tRNA-synt_1b; PFAM_ID:S4; Tyrosine-tRNA ligase; tyrosyl-tRNA synthetase complement(1135830..1137137) Bifidobacterium adolescentis ATCC 15703 4556733 YP_909778.1 CDS BAD_0915 NC_008618.1 1137648 1139057 R Couples the complete acetyl-CoA oxidation toaromatic ring reduction by the use of the low-potentialelectron shuttle ferredoxin; Orthologue of DP2321; 2-ketoglutarate oxidoreductase subunit alpha complement(1137648..1139057) Bifidobacterium adolescentis ATCC 15703 4556800 YP_909779.1 CDS BAD_0916 NC_008618.1 1139232 1140020 R Orthologue of lin2818; hypothetical protein complement(1139232..1140020) Bifidobacterium adolescentis ATCC 15703 4556801 YP_909780.1 CDS BAD_0917 NC_008618.1 1140020 1140529 R COG family: predicted HD superfamily hydrolase; Orthologue of BL1053; PFAM_ID: HD; hypothetical protein complement(1140020..1140529) Bifidobacterium adolescentis ATCC 15703 4556802 YP_909781.1 CDS argH NC_008618.1 1140557 1142092 R catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase complement(1140557..1142092) Bifidobacterium adolescentis ATCC 15703 4557394 YP_909782.1 CDS argG NC_008618.1 1142162 1143418 R catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase complement(1142162..1143418) Bifidobacterium adolescentis ATCC 15703 4557393 YP_909783.1 CDS argR NC_008618.1 1143496 1144014 R COG family: arginine repressor; Orthologue of BL1059; PFAM_ID: Arg_repressor_C; PFAM_ID:Arg_repressor; arginine repressor complement(1143496..1144014) Bifidobacterium adolescentis ATCC 15703 4557396 YP_909784.1 CDS argF NC_008618.1 1144014 1144982 R catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase complement(1144014..1144982) Bifidobacterium adolescentis ATCC 15703 4557392 YP_909785.1 CDS argD NC_008618.1 1145025 1146248 R catalyzes the formation of N-acetyl-l-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine aminotransferase complement(1145025..1146248) Bifidobacterium adolescentis ATCC 15703 4557391 YP_909786.1 CDS argB NC_008618.1 1146310 1147266 R catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase complement(1146310..1147266) Bifidobacterium adolescentis ATCC 15703 4557389 YP_909787.1 CDS argJ NC_008618.1 1147277 1148449 R bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase complement(1147277..1148449) Bifidobacterium adolescentis ATCC 15703 4557395 YP_909788.1 CDS argC NC_008618.1 1148446 1149582 R catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase complement(1148446..1149582) Bifidobacterium adolescentis ATCC 15703 4557390 YP_909789.1 CDS BAD_0926 NC_008618.1 1149684 1150457 R Orthologue of BL1065; hypothetical protein complement(1149684..1150457) Bifidobacterium adolescentis ATCC 15703 4557116 YP_909790.1 CDS pheT NC_008618.1 1150454 1153057 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta complement(1150454..1153057) Bifidobacterium adolescentis ATCC 15703 4556530 YP_909791.1 CDS pheS NC_008618.1 1153071 1154138 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha complement(1153071..1154138) Bifidobacterium adolescentis ATCC 15703 4556529 YP_909792.1 CDS BAD_0929 NC_008618.1 1154205 1155077 R COG family: rRNA methylases; Orthologue of BL1068; PFAM_ID:SpoU_methylase; rRNA methylase complement(1154205..1155077) Bifidobacterium adolescentis ATCC 15703 4557117 YP_909793.1 CDS BAD_0930 NC_008618.1 1155289 1156020 D Orthologue of lmo1506; transporter 1155289..1156020 Bifidobacterium adolescentis ATCC 15703 4557118 YP_909794.1 CDS BAD_0931 NC_008618.1 1155977 1156807 D Identified by match to protein family HMM PF00005; Orthologue of BCE2757; ABC transporter 1155977..1156807 Bifidobacterium adolescentis ATCC 15703 4557119 YP_909795.1 CDS BAD_0932 NC_008618.1 1157091 1158485 D COG family: xanthine_uracil permeases; Orthologue of BL0515; PFAM_ID:xan_ur_permease; hypothetical protein 1157091..1158485 Bifidobacterium adolescentis ATCC 15703 4557120 YP_909796.1 CDS BAD_0933 NC_008618.1 1158535 1159677 D Acyl-CoA reductase-like protein; Orthologue of BL0514; acyl protein synthase 1158535..1159677 Bifidobacterium adolescentis ATCC 15703 4557121 YP_909797.1 CDS BAD_0934 NC_008618.1 1159674 1161188 D Orthologue of BL0513; acyl-CoA reductase 1159674..1161188 Bifidobacterium adolescentis ATCC 15703 4557122 YP_909798.1 CDS BAD_0935 NC_008618.1 1161243 1162037 D 3-ketoacyl-acyl carrier protein reductase; COGfamily: dehydrogenases with different specificities(related to short-chain alcohol dehydrogenases); Orthologue of BL0512; PFAM_ID:adh_short; 3-oxoacyl-ACP reductase 1161243..1162037 Bifidobacterium adolescentis ATCC 15703 4557123 YP_909799.1 CDS BAD_0936 NC_008618.1 1162058 1162639 D Orthologue of gbs1997; Similar to unknown protein; hypothetical protein 1162058..1162639 Bifidobacterium adolescentis ATCC 15703 4557124 YP_909800.1 CDS BAD_0937 NC_008618.1 1162653 1163582 R COG family: predicted permeases; Orthologue of BL0281; hypothetical protein complement(1162653..1163582) Bifidobacterium adolescentis ATCC 15703 4557125 YP_909801.1 CDS BAD_0938 NC_008618.1 1163876 1164286 D Orthologue of SCO4446; integral membrane protein 1163876..1164286 Bifidobacterium adolescentis ATCC 15703 4557126 YP_909802.1 CDS BAD_0939 NC_008618.1 1164382 1165689 D Orthologue of Moth_1796; phage integrase 1164382..1165689 Bifidobacterium adolescentis ATCC 15703 4557127 YP_909803.1 CDS BAD_0940 NC_008618.1 1166115 1166633 R Orthologue of Rv2022c; hypothetical protein complement(1166115..1166633) Bifidobacterium adolescentis ATCC 15703 4557128 YP_909804.1 CDS BAD_0941 NC_008618.1 1166806 1167525 D Identified by match to protein family HMM PF03372; Orthologue of BURPS1710b_A0408; putative endonuclease/exonuclease/phosphatase family protein 1166806..1167525 Bifidobacterium adolescentis ATCC 15703 4557129 YP_909805.1 CDS BAD_0942 NC_008618.1 1167296 1167940 R Orthologue of SCP1.290c; putative ATP/GTP-binding protein complement(1167296..1167940) Bifidobacterium adolescentis ATCC 15703 4557130 YP_909806.1 CDS glnA1 NC_008618.1 1168337 1169773 R Orthologue of jk0702_BL1076; glutamine synthetase complement(1168337..1169773) Bifidobacterium adolescentis ATCC 15703 4557711 YP_909807.1 CDS BAD_0944 NC_008618.1 1170036 1170824 R Orthologue of BL1075; hypothetical protein complement(1170036..1170824) Bifidobacterium adolescentis ATCC 15703 4557131 YP_909808.1 CDS pdhD NC_008618.1 1170920 1172443 R COG family: dihydrolipoamidedehydrogenase_glutathio ne oxidoreductase and relatedenzymes; Orthologue of BL1074; PFAM_ID: pyr_redox; dihydrolipoamide dehydrogenase complement(1170920..1172443) Bifidobacterium adolescentis ATCC 15703 4556549 YP_909809.1 CDS BAD_0946 NC_008618.1 1172551 1173276 R Orthologue of BL1073; hypothetical protein complement(1172551..1173276) Bifidobacterium adolescentis ATCC 15703 4557132 YP_909810.1 CDS BAD_0947 NC_008618.1 1173336 1174703 D COG family: acetylornithinedeacetylase_succinyl- diaminopimelate desuccinylase andrelated deacylases; Orthologue of BL1072; PFAM_ID: Peptidase_M20; hypothetical protein 1173336..1174703 Bifidobacterium adolescentis ATCC 15703 4557133 YP_909811.1 CDS BAD_0948 NC_008618.1 1174817 1175695 R COG family: ABC-type cobalt transport system_permease component CbiQ and related transporters; Orthologue of BL1069; PFAM_ID:CbiQ; cobalt ABC transporter permease complement(1174817..1175695) Bifidobacterium adolescentis ATCC 15703 4557134 YP_909812.1 CDS BAD_0949 NC_008618.1 1175697 1177190 R COG family: ABC-type cobalt transport system_ATPase component; Orthologue of BL1070; PFAM_ID: ABC_tran; ABC transporter ATP-binding protein complement(1175697..1177190) Bifidobacterium adolescentis ATCC 15703 4557135 YP_909813.1 CDS BAD_0950 NC_008618.1 1177311 1177925 R Orthologue of BL1071; hypothetical protein complement(1177311..1177925) Bifidobacterium adolescentis ATCC 15703 4557136 YP_909814.1 CDS mrp NC_008618.1 1178178 1179299 R COG family: ATPases involved in chromosomepartitioning; Orthologue of BL0053; PFAM_ID: DUF59; PFAM_ID: fer4_NifH; hypothetical protein complement(1178178..1179299) Bifidobacterium adolescentis ATCC 15703 4556421 YP_909815.1 CDS ligA NC_008618.1 1179365 1182043 R Orthologue of BL0052; LigA protein complement(1179365..1182043) Bifidobacterium adolescentis ATCC 15703 4556290 YP_909816.1 CDS BAD_0953 NC_008618.1 1182122 1185442 R Orthologue of BL0051; hypothetical protein complement(1182122..1185442) Bifidobacterium adolescentis ATCC 15703 4557137 YP_909817.1 CDS BAD_0954 NC_008618.1 1185586 1187724 D Orthologue of BL0050; hypothetical protein 1185586..1187724 Bifidobacterium adolescentis ATCC 15703 4557138 YP_909818.1 CDS BAD_0955 NC_008618.1 1188122 1188961 D COG family: ABC-type cobalt transport system_ATPase component; Orthologue of BL0049; PFAM_ID: ABC_tran; ABC transporter ATP-binding protein 1188122..1188961 Bifidobacterium adolescentis ATCC 15703 4557139 YP_909819.1 CDS BAD_0956 NC_008618.1 1188988 1190190 R COG family: PLP-dependent aminotransferases; Orthologue of BL0048; PFAM_ID: aminotran_1_2; aminotransferase complement(1188988..1190190) Bifidobacterium adolescentis ATCC 15703 4557140 YP_909820.1 CDS ppgK NC_008618.1 1190266 1191033 R COG family: transcriptional regulators; Orthologue of BL0047; PFAM_ID: ROK; polyphosphate glucokinase complement(1190266..1191033) Bifidobacterium adolescentis ATCC 15703 4556542 YP_909821.1 CDS BAD_0958 NC_008618.1 1191288 1192301 R COG family: predicted glycosyltransferases; Orthologue of BL0045; PFAM_ID: Glycos_transf_2; glycosyltransferase complement(1191288..1192301) Bifidobacterium adolescentis ATCC 15703 4557141 YP_909822.1 CDS BAD_0959 NC_008618.1 1192325 1193146 R Identified by Glimmer2; putative; Orthologue of BURPS1710b_2627; hypothetical protein complement(1192325..1193146) Bifidobacterium adolescentis ATCC 15703 4557142 YP_909823.1 CDS BAD_0960 NC_008618.1 1193397 1193765 R COG family: predicted RNA-binding proteincontaining KH domain_ possibly ribosomal protein; Orthologue of BL0042; PFAM_ID:UPF0044; hypothetical protein complement(1193397..1193765) Bifidobacterium adolescentis ATCC 15703 4557143 YP_909824.1 CDS cbiO NC_008618.1 1193784 1196111 R COG family: ABC-type cobalt transport system_permease component CbiQ and related transporters; Orthologue of BL0043; PFAM_ID: CbiQ; PFAM_ID:ABC_tran; cobalt import ATP-binding/permease protein cbiO complement(1193784..1196111) Bifidobacterium adolescentis ATCC 15703 4557560 YP_909825.1 CDS BAD_0962 NC_008618.1 1196224 1196787 R COG family: uncharacterized membrane protein; Orthologue of BL0044; hypothetical protein complement(1196224..1196787) Bifidobacterium adolescentis ATCC 15703 4557144 YP_909826.1 CDS BAD_0963 NC_008618.1 1197108 1200947 R COG family: superfamily II DNA_RNA helicases_ Snf2family; Orthologue of BL1736; PFAM_ID: SNF2_N; PFAM_ID: helicase_C; helicase complement(1197108..1200947) Bifidobacterium adolescentis ATCC 15703 4557145 YP_909827.1 CDS pepC1 NC_008618.1 1201024 1202439 R COG family: aminopeptidase C; Orthologue of BL0173; PFAM_ID:Pept_C1-like; aminopeptidase C complement(1201024..1202439) Bifidobacterium adolescentis ATCC 15703 4556552 YP_909828.1 CDS BAD_0965 NC_008618.1 1202601 1203566 D Orthologue of CE2653; hypothetical protein 1202601..1203566 Bifidobacterium adolescentis ATCC 15703 4557146 YP_909829.1 CDS BAD_0966 NC_008618.1 1203706 1204392 R COG family: Kef-type K+ transport systems_predicted NAD-binding component; Orthologue of BL0664; PFAM_ID: ion_trans; voltage-gated potassium channel protein complement(1203706..1204392) Bifidobacterium adolescentis ATCC 15703 4557147 YP_909830.1 CDS BAD_0967 NC_008618.1 1204627 1205619 R COG family: phosphoglycerate dehydrogenase andrelated dehydrogenases; Orthologue of BL0038; PFAM_ID: 2-Hacid_DH_C; hypothetical protein complement(1204627..1205619) Bifidobacterium adolescentis ATCC 15703 4557148 YP_909831.1 CDS BAD_0968 NC_008618.1 1205660 1206139 R hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase complement(1205660..1206139) Bifidobacterium adolescentis ATCC 15703 4557149 YP_909832.1 CDS BAD_0969 NC_008618.1 1206157 1206828 R Orthologue of BL1548; hypothetical protein complement(1206157..1206828) Bifidobacterium adolescentis ATCC 15703 4557150 YP_909833.1 CDS BAD_0970 NC_008618.1 1206986 1208029 R COG family: transcriptional regulators; Orthologue of BL0142; PFAM_ID: Peripla_BP_like; PFAM_ID:lacI; LacI-type transcriptional regulator complement(1206986..1208029) Bifidobacterium adolescentis ATCC 15703 4557151 YP_909834.1 CDS aglA NC_008618.1 1208286 1210061 D COG family: glycosidases; Orthologue of BL0529; PFAM_ID:alpha-amylase; alpha-1,4-glucosidase 1208286..1210061 Bifidobacterium adolescentis ATCC 15703 4557200 YP_909835.1 CDS BAD_0972 NC_008618.1 1210115 1211482 D COG family: sugar-binding periplasmicproteins_domains; Orthologue of BL0141; PFAM_ID: SBP_bacterial_1; ABC transporter substrate-binding protein 1210115..1211482 Bifidobacterium adolescentis ATCC 15703 4557152 YP_909836.1 CDS BAD_0973 NC_008618.1 1211592 1212065 D Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine andfree tRNA(Tyr). Could be a defense mechanism against aharmful effect of D-tyrosine; Orthologue of BL1326; D-tyrosyl-tRNA(Tyr) deacylase 1211592..1212065 Bifidobacterium adolescentis ATCC 15703 4557153 YP_909837.1 CDS BAD_0974 NC_008618.1 1213113 1215251 R Orthologue of LSA1255; hypothetical protein complement(1213113..1215251) Bifidobacterium adolescentis ATCC 15703 4557154 YP_909838.1 CDS BAD_0975 NC_008618.1 1215815 1216003 D Orthologue of Ava_0847; glycosyl transferase family protein 1215815..1216003 Bifidobacterium adolescentis ATCC 15703 4557174 YP_909839.1 CDS BAD_0976 NC_008618.1 1216035 1216970 D Orthologue of Cag_1061; phage AbiD protein 1216035..1216970 Bifidobacterium adolescentis ATCC 15703 4557175 YP_909840.1 CDS BAD_0977 NC_008618.1 1217062 1217415 R Identified by match to protein family HMM; Orthologue of CC3080; nucleotidyltransferase family protein complement(1217062..1217415) Bifidobacterium adolescentis ATCC 15703 4557176 YP_909841.1 CDS BAD_0978 NC_008618.1 1217412 1217732 R Orthologue of XF1862_RPA0941; Similar to GI|1934987; hypothetical protein complement(1217412..1217732) Bifidobacterium adolescentis ATCC 15703 4557177 YP_909842.1 CDS BAD_0979 NC_008618.1 1217806 1218042 D Orthologue of SSO3095; hypothetical protein 1217806..1218042 Bifidobacterium adolescentis ATCC 15703 4557178 YP_909843.1 CDS BAD_0980 NC_008618.1 1218350 1219003 D COG family: dihydroxyaciddehydratase_phosphoglucona te dehydratase; Orthologue of BL0923; hypothetical protein 1218350..1219003 Bifidobacterium adolescentis ATCC 15703 4557179 YP_909844.1 CDS BAD_0981 NC_008618.1 1219021 1219629 R COG family: permeases of the major facilitatorsuperfamily; Orthologue of BL1801; hypothetical protein complement(1219021..1219629) Bifidobacterium adolescentis ATCC 15703 4557180 YP_909845.1 CDS murG NC_008618.1 1219658 1219915 R Orthologue of Nmul_D2818_BPP3752; UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenolN- acetylglucosamine transferase; involved in cell wallformation; inner membrane-associated; last step ofpeptidoglycan synthesis; hypothetical protein complement(1219658..1219915) Bifidobacterium adolescentis ATCC 15703 4556377 YP_909846.1 CDS BAD_0983 NC_008618.1 1219974 1220747 R COG family: histone acetyltransferase Hpa2 andrelated acetyltransferases; Orthologue of BL1401; PFAM_ID: Acetyltransf; hypothetical protein complement(1219974..1220747) Bifidobacterium adolescentis ATCC 15703 4557181 YP_909847.1 CDS BAD_0984 NC_008618.1 1220906 1221658 D Orthologue of BCZK1488; hypothetical protein 1220906..1221658 Bifidobacterium adolescentis ATCC 15703 4557182 YP_909848.1 CDS dnaQ1 NC_008618.1 1221690 1222313 R 3'-5' exonuclease of DNA polymerase III; Orthologue of SAV6439; putative DNA polymerase III subunit epsilon complement(1221690..1222313) Bifidobacterium adolescentis ATCC 15703 4556257 YP_909849.1 CDS mmuM NC_008618.1 1222370 1222615 R Converts homocysteine and S-adenosyl-methionine tomethionine and S-adenosyl-homocysteine orS-methyl-methionine and homocysteine to two methionines; Orthologue of lp_1298; homocysteine methyltransferase complement(1222370..1222615) Bifidobacterium adolescentis ATCC 15703 4556416 YP_909850.1 CDS hutM NC_008618.1 1222731 1223435 R COG family: amino acid transporters; Orthologue of BL0778; PFAM_ID:aa_permeases; histidine permease complement(1222731..1223435) Bifidobacterium adolescentis ATCC 15703 4556186 YP_909851.1 CDS tig NC_008618.1 1223947 1225317 R Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor complement(1223947..1225317) Bifidobacterium adolescentis ATCC 15703 4557650 YP_909852.1 CDS BAD_0989 NC_008618.1 1225370 1226665 R COG family: ribonuclease D; Orthologue of BL0948; PFAM_ID:3_5_exonuclease; hypothetical protein complement(1225370..1226665) Bifidobacterium adolescentis ATCC 15703 4557183 YP_909853.1 CDS BAD_0990 NC_008618.1 1226658 1227290 R Orthologue of BL0949; hypothetical protein complement(1226658..1227290) Bifidobacterium adolescentis ATCC 15703 4557184 YP_909854.1 CDS pflA NC_008618.1 1227478 1228356 R COG family:pyruvate-formate lyase-activating enzyme; Orthologue of BL0950; PFAM_ID:Radical_activat; Pfl-activating enzyme; pyruvate formate-lyase 1 activating enzyme complement(1227478..1228356) Bifidobacterium adolescentis ATCC 15703 4556560 YP_909855.1 CDS pfl NC_008618.1 1228494 1230869 R Orthologue of BL0951_HI0180; formate acetyltransferase complement(1228494..1230869) Bifidobacterium adolescentis ATCC 15703 4556559 YP_909856.1 CDS BAD_0993 NC_008618.1 1231018 1231311 R Orthologue of BL0952; hypothetical protein complement(1231018..1231311) Bifidobacterium adolescentis ATCC 15703 4557185 YP_909857.1 CDS nadE NC_008618.1 1231271 1232254 R COGfamily: NAD synthase; Orthologue of BL0953; PFAM_ID: CN_hydrolase; PFAM_ID:NAD_synthase; glutamine-dependent NAD(+) synthetase complement(1231271..1232254) Bifidobacterium adolescentis ATCC 15703 4556384 YP_909858.1 CDS BAD_0995 NC_008618.1 1233054 1234202 R COG family: metal- dependentamidase_aminoacylase_carboxypeptidase; Orthologue of BL0954; PFAM_ID:Peptidase_M20; hypothetical protein complement(1233054..1234202) Bifidobacterium adolescentis ATCC 15703 4557186 YP_909859.1 CDS BAD_0996 NC_008618.1 1234313 1235134 D COG family: predicted hydrolases of the Hadsuperfamily; Orthologue of BL0958; PFAM_ID: Hydrolase; HAD-type hydrolase 1234313..1235134 Bifidobacterium adolescentis ATCC 15703 4557187 YP_909860.1 CDS BAD_0997 NC_008618.1 1235270 1236178 D Orthologue of PA5505; TonB-dependent receptor 1235270..1236178 Bifidobacterium adolescentis ATCC 15703 4557188 YP_909861.1 CDS BAD_0998 NC_008618.1 1236266 1237090 D ATP-binding protein; Identified by match to protein family HMM PF00005; Orthologue of BTH_I1650; D-methionine ABC transporter 1236266..1237090 Bifidobacterium adolescentis ATCC 15703 4557189 YP_909862.1 CDS BAD_0999 NC_008618.1 1237092 1237772 D Orthologue of VV0891; ABC-type metal ion transport system permease 1237092..1237772 Bifidobacterium adolescentis ATCC 15703 4557190 YP_909863.1 CDS BAD_1000 NC_008618.1 1237868 1238317 R Orthologue of Pcar_2682; hypothetical protein complement(1237868..1238317) Bifidobacterium adolescentis ATCC 15703 4557191 YP_909864.1 CDS BAD_1001 NC_008618.1 1238441 1238980 D COG family: peptidyl-prolyl cis-trans isomerase(rotamase) - cyclophilin family; Orthologue of BL1442; PFAM_ID: pro_isomerase; peptidyl-prolyl cis-trans isomerase 1238441..1238980 Bifidobacterium adolescentis ATCC 15703 4557192 YP_909865.1 CDS relA NC_008618.1 1239093 1241405 R Orthologue of Rv2583c_BL1439; Probable relA_GTP pyrophosphokinase (EC 2.7.6.5); GTP pyrophosphokinase complement(1239093..1241405) Bifidobacterium adolescentis ATCC 15703 4556632 YP_909866.1 CDS dut NC_008618.1 1241534 1242091 R COG family:dUTPase; Orthologue of BL1438; PFAM_ID: dUTPase; dUTP pyrophosphatase; deoxyuridine 5'-triphosphate nucleotidohydrolase complement(1241534..1242091) Bifidobacterium adolescentis ATCC 15703 4556265 YP_909867.1 CDS BAD_1004 NC_008618.1 1242010 1242321 R Orthologue of BL1437; hypothetical protein complement(1242010..1242321) Bifidobacterium adolescentis ATCC 15703 4557250 YP_909868.1 CDS BAD_1005 NC_008618.1 1242452 1243447 D Orthologue of BL1436; hypothetical protein 1242452..1243447 Bifidobacterium adolescentis ATCC 15703 4557251 YP_909869.1 CDS BAD_1006 NC_008618.1 1243503 1244738 R COG family: uncharacterized proteins of the APsuperfamily; Orthologue of BL1435; hypothetical protein complement(1243503..1244738) Bifidobacterium adolescentis ATCC 15703 4557252 YP_909870.1 CDS gyrA2 NC_008618.1 1244815 1247490 D decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 1244815..1247490 Bifidobacterium adolescentis ATCC 15703 4556145 YP_909871.1 CDS lhr NC_008618.1 1247614 1252491 R Orthologue of b1653_BL1432; ATP-dependent helicase II complement(1247614..1252491) Bifidobacterium adolescentis ATCC 15703 4556289 YP_909872.1 CDS BAD_1009 NC_008618.1 1252585 1253817 R COG family: permeases of the major facilitatorsuperfamily; Orthologue of BL1430; hypothetical protein complement(1252585..1253817) Bifidobacterium adolescentis ATCC 15703 4557253 YP_909873.1 CDS gyrB2 NC_008618.1 1254011 1256335 R COG family: DNA gyrase (topoisomerase II) Bsubunit; Orthologue of BL1429; PFAM_ID: DNA_gyraseB_C; PFAM_ID: DNA_topoisoII; PFAM_ID: HATPase_c; DNA gyrase subunit B complement(1254011..1256335) Bifidobacterium adolescentis ATCC 15703 4556147 YP_909874.1 CDS hrdB NC_008618.1 1256430 1257869 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; RNA polymerase sigma factor complement(1256430..1257869) Bifidobacterium adolescentis ATCC 15703 4556182 YP_909875.1 CDS BAD_1012 NC_008618.1 1257991 1258635 R Orthologue of BL1427; hypothetical protein complement(1257991..1258635) Bifidobacterium adolescentis ATCC 15703 4557254 YP_909876.1 CDS idsA NC_008618.1 1258845 1259933 D COG family: geranylgeranyl pyrophosphatesynthase; Orthologue of BL1426; PFAM_ID: polyprenyl_synt; includes: farnesylpyrophosphate synthetase (Fpp synthetase)(dimethylallyltransferase); geranyltranstransferase; bifunctional short chain isoprenyl diphosphate synthase 1258845..1259933 Bifidobacterium adolescentis ATCC 15703 4556189 YP_909877.1 CDS pknA2 NC_008618.1 1260029 1262227 D COG family: serine_threonine proteinkinases; Orthologue of BL1425; PFAM_ID: pkinase; serine-threonine protein kinase pknA2 1260029..1262227 Bifidobacterium adolescentis ATCC 15703 4556534 YP_909878.1 CDS BAD_1015 NC_008618.1 1262326 1263054 R COG family: 1-acyl-sn-glycerol-3- phosphateacyltransferase; Orthologue of BL1424; PFAM_ID: Acyltransferase; hypothetical protein complement(1262326..1263054) Bifidobacterium adolescentis ATCC 15703 4557255 YP_909879.1 CDS BAD_1016 NC_008618.1 1263105 1263671 D Orthologue of BL1423; hypothetical protein 1263105..1263671 Bifidobacterium adolescentis ATCC 15703 4557256 YP_909880.1 CDS BAD_1017 NC_008618.1 1263773 1264483 R Orthologue of HI1721; transposase complement(1263773..1264483) Bifidobacterium adolescentis ATCC 15703 4557257 YP_909881.1 CDS t150 NC_008618.1 1264366 1265130 R Orthologue of b3558; IS150 putative transposase complement(1264366..1265130) Bifidobacterium adolescentis ATCC 15703 4556458 YP_909882.1 CDS trpD NC_008618.1 1265241 1266374 R Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase complement(1265241..1266374) Bifidobacterium adolescentis ATCC 15703 4556721 YP_909883.2 CDS secA1 NC_008618.1 1266487 1269363 R functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA complement(1266487..1269363) Bifidobacterium adolescentis ATCC 15703 4556707 YP_909884.1 CDS BAD_1021 NC_008618.1 1269542 1270204 R COG family: ribosome-associated protein y (Psrp-1); Orthologue of BL1418; PFAM_ID: Ribosomal_S30; hypothetical protein complement(1269542..1270204) Bifidobacterium adolescentis ATCC 15703 4557258 YP_909885.1 CDS BAD_1022 NC_008618.1 1270367 1270750 R Orthologue of BL1417; hypothetical protein complement(1270367..1270750) Bifidobacterium adolescentis ATCC 15703 4557259 YP_909886.1 CDS BAD_1023 NC_008618.1 1270826 1271521 R COG family: uncharacterized Bcr; Orthologue of BL1416; PFAM_ID: RecX; RecX-like protein complement(1270826..1271521) Bifidobacterium adolescentis ATCC 15703 4557260 YP_909887.1 CDS recA NC_008618.1 1271525 1272709 R catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A complement(1271525..1272709) Bifidobacterium adolescentis ATCC 15703 4556623 YP_909888.1 CDS BAD_1025 NC_008618.1 1272854 1273231 D Orthologue of SCO0160; Spossible DNA-binding protein_ len: 195aa_ similarity to Mycobacterium tuberculosis TR:O53625(EMBL; AL021428) hypothetical 16.6 KD protein; DNA-binding protein 1272854..1273231 Bifidobacterium adolescentis ATCC 15703 4557261 YP_909889.1 CDS BAD_1026 NC_008618.1 1273246 1273746 R COG family: predicted transcriptional regulators; Orthologue of BL1414; PFAM_ID: HTH_3; DNA binding protein complement(1273246..1273746) Bifidobacterium adolescentis ATCC 15703 4557262 YP_909890.1 CDS BAD_1027 NC_008618.1 1273818 1274390 R COG family: uncharacterized protein (competence-and mitomycin-induced); Orthologue of BL1413; PFAM_ID: CinA; CinA-like protein complement(1273818..1274390) Bifidobacterium adolescentis ATCC 15703 4557263 YP_909891.1 CDS pgsA3 NC_008618.1 1274391 1275065 R COG family: phosphatidylglycerophosphatesynthase; Orthologue of BL1412; PFAM_ID: CDP-OH_P_transf; Phosphatidylglycerophosphate synthase; DP-diacylglycerol--glycerol-3-phosphate 3- phosphatidyltransferase complement(1274391..1275065) Bifidobacterium adolescentis ATCC 15703 4556527 YP_909892.1 CDS ftsK NC_008618.1 1275125 1277929 R Orthologue of Tfu_0793_BL1411; DNA translocase ftsK complement(1275125..1277929) Bifidobacterium adolescentis ATCC 15703 4557233 YP_909893.1 CDS BAD_1030 NC_008618.1 1278193 1281201 D Orthologue of BF0839; mannan endo-1,4-beta-mannosidase 1278193..1281201 Bifidobacterium adolescentis ATCC 15703 4557264 YP_909894.1 CDS miaA NC_008618.1 1281330 1282340 R IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase complement(1281330..1282340) Bifidobacterium adolescentis ATCC 15703 4556415 YP_909895.1 CDS BAD_1032 NC_008618.1 1282324 1283766 R catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase complement(1282324..1283766) Bifidobacterium adolescentis ATCC 15703 4557265 YP_909896.1 CDS BAD_1033 NC_008618.1 1283924 1284652 D COG family: uncharacterized Bcr; Orthologue of BL1407; hypothetical protein 1283924..1284652 Bifidobacterium adolescentis ATCC 15703 4557266 YP_909897.1 CDS BAD_1034 NC_008618.1 1284724 1285674 R COG family: permeases of the drug_metabolitetransporter (Dmt) superfamily; Orthologue of BL1406; PFAM_ID:DUF6; integral membrane protein complement(1284724..1285674) Bifidobacterium adolescentis ATCC 15703 4557267 YP_909898.1 CDS BAD_1035 NC_008618.1 1285801 1286682 R COG family: integral membrane protein_ interactswith FtsH; Orthologue of BL1405; PFAM_ID: UPF0005; hypothetical protein complement(1285801..1286682) Bifidobacterium adolescentis ATCC 15703 4557268 YP_909899.1 CDS BAD_1036 NC_008618.1 1286799 1287569 R Orthologue of BL1404; hypothetical protein complement(1286799..1287569) Bifidobacterium adolescentis ATCC 15703 4557269 YP_909900.1 CDS BAD_1037 NC_008618.1 1287732 1289105 D COG family: sensory transduction histidine kinases; Orthologue of BL1403; atypical histidine kinase sensor of two-component system 1287732..1289105 Bifidobacterium adolescentis ATCC 15703 4557407 YP_909901.1 CDS BAD_1038 NC_008618.1 1289165 1289794 D COG family: response regulators consisting of aCheY-like receiver domain and a HTH DNA-binding domain; Orthologue of BL1402; PFAM_ID: GerE; PFAM_ID: response_reg; response regulator of two-component system 1289165..1289794 Bifidobacterium adolescentis ATCC 15703 4557408 YP_909902.1 CDS BAD_1039 NC_008618.1 1289912 1292026 D COG family: uncharacterized Acr; Orthologue of BL1400; hypothetical protein 1289912..1292026 Bifidobacterium adolescentis ATCC 15703 4557409 YP_909903.1 CDS BAD_1040 NC_008618.1 1292090 1292794 R COG family: response regulators consisting of aCheY-like receiver domain and a HTH DNA-binding domain; Orthologue of BL0903; PFAM_ID: GerE; PFAM_ID: response_reg; response regulator of two-component system complement(1292090..1292794) Bifidobacterium adolescentis ATCC 15703 4557410 YP_909904.1 CDS BAD_1041 NC_008618.1 1292794 1294008 R COG family: sensory transduction histidine kinases; Orthologue of BL0902; histidine kinase sensor of two-component system complement(1292794..1294008) Bifidobacterium adolescentis ATCC 15703 4557411 YP_909905.1 CDS BAD_1042 NC_008618.1 1294159 1295211 D COG family: ABC-type multidrug transport system_ATPase component; Orthologue of BL0901; PFAM_ID: ABC_tran; ABC transporter ATP-binding protein 1294159..1295211 Bifidobacterium adolescentis ATCC 15703 4557412 YP_909906.1 CDS BAD_1043 NC_008618.1 1295256 1296506 D COG family: ABC-type multidrug transport system_permease component; Orthologue of BL0900; hypothetical protein 1295256..1296506 Bifidobacterium adolescentis ATCC 15703 4557413 YP_909907.1 CDS BAD_1044 NC_008618.1 1296493 1297782 D COG family: ABC-type multidrug transport system_permease component; Orthologue of BL0899; hypothetical protein 1296493..1297782 Bifidobacterium adolescentis ATCC 15703 4557414 YP_909908.1 CDS BAD_1045 NC_008618.1 1297898 1298290 D COG family: lactoylglutathione lyase and relatedlyases; Orthologue of BL0896; PFAM_ID: Glyoxalase; hypothetical protein 1297898..1298290 Bifidobacterium adolescentis ATCC 15703 4557415 YP_909909.1 CDS BAD_1046 NC_008618.1 1298315 1299841 R Orthologue of CPE0864; hypothetical protein complement(1298315..1299841) Bifidobacterium adolescentis ATCC 15703 4557416 YP_909910.1 CDS BAD_1047 NC_008618.1 1299929 1300495 R Orthologue of lp_3093; putative muramidase complement(1299929..1300495) Bifidobacterium adolescentis ATCC 15703 4557417 YP_909911.1 CDS ydeC NC_008618.1 1300553 1301605 D Orthologue of BSU05150; Similar to transcriptional regulator (AraC_XylSfamily); hypothetical protein 1300553..1301605 Bifidobacterium adolescentis ATCC 15703 4556768 YP_909912.1 CDS pstX NC_008618.1 1301688 1301888 R Orthologue of jk1779; non-ribosomal peptide synthetase complement(1301688..1301888) Bifidobacterium adolescentis ATCC 15703 4556680 YP_909913.1 CDS BAD_1050 NC_008618.1 1302078 1303067 R Identified by Glimmer2; putative; Orthologue of BURPS1710b_0926; hypothetical protein complement(1302078..1303067) Bifidobacterium adolescentis ATCC 15703 4557418 YP_909914.1 CDS BAD_1051 NC_008618.1 1303092 1303370 R COG family: transcriptional regulators; Orthologue of BL0107; PFAM_ID: Peripla_BP_like; PFAM_ID:lacI; LacI-type transcriptional regulator complement(1303092..1303370) Bifidobacterium adolescentis ATCC 15703 4557419 YP_909915.1 CDS acn NC_008618.1 1303503 1306202 R Catalyzes the conversion of citrate to isocitrate; aconitate hydratase complement(1303503..1306202) Bifidobacterium adolescentis ATCC 15703 4557194 YP_909916.1 CDS ctpE NC_008618.1 1306281 1308755 R COG family: cation transport ATPases; Orthologue of BL1396; PFAM_ID: E1-E2_ATPase; PFAM_ID: Hydrolase; cation-transporting ATPase complement(1306281..1308755) Bifidobacterium adolescentis ATCC 15703 4556233 YP_909917.1 CDS BAD_1054 NC_008618.1 1308893 1309486 R Orthologue of BL1395; hypothetical protein complement(1308893..1309486) Bifidobacterium adolescentis ATCC 15703 4557420 YP_909918.1 CDS BAD_1055 NC_008618.1 1309483 1310748 R COG family: SAM-dependent methyltransferasesrelated to tRNA (uracil-5-)-methyltransferase; Orthologue of BL1394; PFAM_ID:TRAM; RNA methyltransferase complement(1309483..1310748) Bifidobacterium adolescentis ATCC 15703 4557421 YP_909919.1 CDS BAD_1056 NC_008618.1 1310748 1311488 R Orthologue of BL1393; hypothetical protein complement(1310748..1311488) Bifidobacterium adolescentis ATCC 15703 4557422 YP_909920.1 CDS BAD_1057 NC_008618.1 1311518 1312366 R Orthologue of BL1392; hypothetical protein complement(1311518..1312366) Bifidobacterium adolescentis ATCC 15703 4557423 YP_909921.1 CDS BAD_1058 NC_008618.1 1312489 1313349 R COG family: exonuclease III; Orthologue of BL1391; PFAM_ID:AP_endonucleas1; exodeoxyribonuclease complement(1312489..1313349) Bifidobacterium adolescentis ATCC 15703 4557424 YP_909922.1 CDS dppD NC_008618.1 1313423 1315432 R COG family: ATPase components of various ABC-typetransport systems_ contain duplicated ATPase; Orthologue of BL1390; PFAM_ID:ABC_tran; dipeptide transport ATP-binding protein complement(1313423..1315432) Bifidobacterium adolescentis ATCC 15703 4556263 YP_909923.1 CDS dppC NC_008618.1 1315454 1316422 R COG family: ABC-typedipeptide_oligopeptide_nickel transport systems_ permeasecomponents; Orthologue of BL1389; PFAM_ID: BPD_transp; peptide ABC transporter permease complement(1315454..1316422) Bifidobacterium adolescentis ATCC 15703 4556262 YP_909924.1 CDS dppB NC_008618.1 1316443 1317369 R COG family: ABC-typedipeptide_oligopeptide_nickel transport systems_ permeasecomponents; Orthologue of BL1387; peptide ABC transporter permease complement(1316443..1317369) Bifidobacterium adolescentis ATCC 15703 4556261 YP_909925.1 CDS dppA2 NC_008618.1 1317697 1319373 R COG family: ABC-typedipeptide_oligopeptide_nickel transport systems_periplasmic components; Orthologue of BL1386; PFAM_ID:SBP_bac_5; ABC-type transporter complement(1317697..1319373) Bifidobacterium adolescentis ATCC 15703 4556259 YP_909926.1 CDS xerC NC_008618.1 1319652 1320641 R site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC complement(1319652..1320641) Bifidobacterium adolescentis ATCC 15703 4557425 YP_909927.1 CDS BAD_1064 NC_008618.1 1320745 1321590 D Orthologue of BL0932_nfa46550; putative ABC transporter ATP-binding protein 1320745..1321590 Bifidobacterium adolescentis ATCC 15703 4556059 YP_909928.1 CDS BAD_1065 NC_008618.1 1321587 1324433 D Orthologue of BL0932_SCO3110_nfa46550; putative ABC transport system integral membrane protein 1321587..1324433 Bifidobacterium adolescentis ATCC 15703 4556060 YP_909929.1 CDS tyrA NC_008618.1 1324823 1325863 R COG family: prephenate dehydrogenase; Orthologue of BL1382; PFAM_ID: PDH; prephenate dehydrogenase complement(1324823..1325863) Bifidobacterium adolescentis ATCC 15703 4556732 YP_909930.1 CDS pheA NC_008618.1 1325857 1326837 R COG family: prephenate dehydratase; Orthologue of BL1381; PFAM_ID: ACT; PFAM_ID:PDT; chorismate mutase complement(1325857..1326837) Bifidobacterium adolescentis ATCC 15703 4556528 YP_909931.1 CDS BAD_1068 NC_008618.1 1326907 1327467 R Orthologue of BL1380; hypothetical protein complement(1326907..1327467) Bifidobacterium adolescentis ATCC 15703 4556061 YP_909932.1 CDS BAD_1069 NC_008618.1 1327618 1329549 R COG family: predicted membrane GTPase involved instress response; Orthologue of BL1379; PFAM_ID: GTP_EFTU; GTP-binding elongation factor TypA/BipA complement(1327618..1329549) Bifidobacterium adolescentis ATCC 15703 4556062 YP_909933.1 CDS BAD_1070 NC_008618.1 1329741 1331096 R COG family: permeases of the major facilitatorsuperfamily; Orthologue of BL1378; PFAM_ID: sugar_tr; sugar transporter complement(1329741..1331096) Bifidobacterium adolescentis ATCC 15703 4556063 YP_909934.1 CDS BAD_1071 NC_008618.1 1331164 1331967 R COG family: ADP-ribose pyrophosphatase; Orthologue of BL1373; PFAM_ID:NUDIX; hypothetical protein complement(1331164..1331967) Bifidobacterium adolescentis ATCC 15703 4556064 YP_909935.1 CDS BAD_1072 NC_008618.1 1332101 1332940 R COG family: ATPases involved in chromosomepartitioning; Orthologue of BL1370; PFAM_ID: ParA; PFAM_ID: fer4_NifH; hypothetical protein complement(1332101..1332940) Bifidobacterium adolescentis ATCC 15703 4556065 YP_909936.1 CDS xerD NC_008618.1 1333039 1333992 R COG family: integrase; Orthologue of BL1368; PFAM_ID: Phage_integrase; tyrosine recombinase xerD complement(1333039..1333992) Bifidobacterium adolescentis ATCC 15703 4556756 YP_909937.1 CDS rplT NC_008618.1 1334238 1334621 R binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 complement(1334238..1334621) Bifidobacterium adolescentis ATCC 15703 4556492 YP_909938.1 CDS rpmI NC_008618.1 1334674 1334868 R COG family: ribosomal protein L35; Orthologue of BL1366a; PFAM_ID:Ribosomal_L35p; 50S ribosomal protein L35 complement(1334674..1334868) Bifidobacterium adolescentis ATCC 15703 4556640 YP_909939.1 CDS infC NC_008618.1 1334887 1335807 R COG family: translation initiation factorIf3; Orthologue of BL1366; PFAM_ID: IF3; translation initiation factor IF-3 complement(1334887..1335807) Bifidobacterium adolescentis ATCC 15703 4556220 YP_909940.1 CDS asnH NC_008618.1 1335874 1337760 R Aspartate family; Orthologue of L0095; asparagine synthetase complement(1335874..1337760) Bifidobacterium adolescentis ATCC 15703 4557687 YP_909941.1 CDS BAD_1078 NC_008618.1 1337949 1338695 D Orthologue of BL1364; hypothetical protein 1337949..1338695 Bifidobacterium adolescentis ATCC 15703 4556066 YP_909942.1 CDS gap NC_008618.1 1338867 1339922 D COG family:glyceraldehyde-3- phosphatedehydrogenase_erythrose-4-phosphate dehydrogenase; Orthologue of BL1363; PFAM_ID: GpdH; PFAM_ID: gpdh_C; glyceraldehyde 3-phosphate dehydrogenase C 1338867..1339922 Bifidobacterium adolescentis ATCC 15703 4557244 YP_909943.1 CDS BAD_1080 NC_008618.1 1340041 1340556 D COG family: uncharacterized Acr; Orthologue of BL1362; hypothetical protein 1340041..1340556 Bifidobacterium adolescentis ATCC 15703 4556067 YP_909944.1 CDS ispH NC_008618.1 1340649 1341680 R catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase complement(1340649..1341680) Bifidobacterium adolescentis ATCC 15703 4556227 YP_909945.1 CDS BAD_1082 NC_008618.1 1341840 1342790 D COG family: galactose mutarotase and relatedenzymes; Orthologue of BL1359; PFAM_ID: Aldose_epim; hypothetical protein 1341840..1342790 Bifidobacterium adolescentis ATCC 15703 4556068 YP_909946.1 CDS BAD_1083 NC_008618.1 1343137 1343388 R Orthologue of BL1358; hypothetical protein complement(1343137..1343388) Bifidobacterium adolescentis ATCC 15703 4556069 YP_909947.1 CDS sigH NC_008618.1 1343385 1343975 R Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; RNA polymerase sigma factor RpoE complement(1343385..1343975) Bifidobacterium adolescentis ATCC 15703 4556448 YP_909948.1 CDS murE NC_008618.1 1344097 1345650 D involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 1344097..1345650 Bifidobacterium adolescentis ATCC 15703 4556375 YP_909949.1 CDS BAD_1086 NC_008618.1 1345670 1346914 D Orthologue of LSA0098; hypothetical protein 1345670..1346914 Bifidobacterium adolescentis ATCC 15703 4556070 YP_909950.1 CDS racD NC_008618.1 1346911 1347636 D Orthologue of L92665; murein sacculusand peptidoglycan provides D-aspartate_ which plays arole of cross-bridge during peptidoglycan networkformation; aspartate racemase 1346911..1347636 Bifidobacterium adolescentis ATCC 15703 4556615 YP_909951.1 CDS folC NC_008618.1 1347795 1349393 R COG family: folylpolyglutamatesynthase; Orthologue of BL1353; PFAM_ID: Mur_ligase; folylpolyglutamate synthase complement(1347795..1349393) Bifidobacterium adolescentis ATCC 15703 4556972 YP_909952.1 CDS pepP NC_008618.1 1349573 1351177 D Orthologue of BL1350; PFAM_ID: Peptidase_M24; Xaa-Pro aminopeptidase 1349573..1351177 Bifidobacterium adolescentis ATCC 15703 4556558 YP_909953.1 CDS BAD_1090 NC_008618.1 1351187 1351708 D COG family: NTP pyrophosphohydrolases includingoxidative damage repair enzymes; Orthologue of BL1349; PFAM_ID: NUDIX; hypothetical protein 1351187..1351708 Bifidobacterium adolescentis ATCC 15703 4556071 YP_909954.1 CDS dppD NC_008618.1 1351796 1353508 R Identified by sequence similarity; Orthologue of Lxx08560_BL1348; ABC transporter ATP-binding protein complement(1351796..1353508) Bifidobacterium adolescentis ATCC 15703 4556264 YP_909955.1 CDS BAD_1092 NC_008618.1 1353513 1354688 R COG family: ABC-type dipeptide_oligopeptide_nickeltransport systems_ permease components; Orthologue of BL1347; peptide ABC transporter permease complement(1353513..1354688) Bifidobacterium adolescentis ATCC 15703 4556072 YP_909956.1 CDS BAD_1093 NC_008618.1 1354690 1355763 R COG family: ABC-type dipeptide_oligopeptide_nickeltransport systems_ permease components; Orthologue of BL1346; PFAM_ID:BPD_transp; peptide ABC transporter permease complement(1354690..1355763) Bifidobacterium adolescentis ATCC 15703 4556073 YP_909957.1 CDS BAD_1094 NC_008618.1 1355852 1357477 R COG family: ABC-type dipeptide_oligopeptide_nickeltransport systems_ periplasmic components; Orthologue of BL1345; PFAM_ID:SBP_bac_5; peptides ABC transporter substrate-binding protein complement(1355852..1357477) Bifidobacterium adolescentis ATCC 15703 4556074 YP_909958.1 CDS BAD_1095 NC_008618.1 1357869 1359071 D COG family: transcriptional regulators; Orthologue of BL1340; PFAM_ID:ROK; ROK family transcriptional regulator 1357869..1359071 Bifidobacterium adolescentis ATCC 15703 4556075 YP_909959.1 CDS BAD_1096 NC_008618.1 1359102 1360001 D COG family: sugar kinases_ ribokinase family; Orthologue of BL1339; PFAM_ID: pfkB; PfkB family sugar kinase 1359102..1360001 Bifidobacterium adolescentis ATCC 15703 4556076 YP_909960.1 CDS BAD_1097 NC_008618.1 1360365 1360667 R Orthologue of Plut_0902; DEAD/DEAH box helicase complement(1360365..1360667) Bifidobacterium adolescentis ATCC 15703 4556077 YP_909961.1 CDS BAD_1098 NC_008618.1 1360877 1361281 D COG family: predicted flavin-nucleotide-bindingprotein structurally related to pyridoxine 5'-phosphateoxidase; Orthologue of BL1445; hypothetical protein 1360877..1361281 Bifidobacterium adolescentis ATCC 15703 4556078 YP_909962.1 CDS ftsQ NC_008618.1 1361447 1362436 R Identified by sequence similarity; Orthologue of Lxx15240; cell division protein complement(1361447..1362436) Bifidobacterium adolescentis ATCC 15703 4557234 YP_909963.1 CDS murC NC_008618.1 1362436 1364001 R COG family: UDP-N-acetylmuramate-alanine ligase; Orthologue of BL1324; PFAM_ID:Mur_ligase; UDP-N-acetylmuramoyl-L-alanine synthetase; UDP-N-acetylmuramate--L-alanine ligase complement(1362436..1364001) Bifidobacterium adolescentis ATCC 15703 4556373 YP_909964.1 CDS murG NC_008618.1 1364091 1365272 R UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase complement(1364091..1365272) Bifidobacterium adolescentis ATCC 15703 4556378 YP_909965.1 CDS fstW NC_008618.1 1365394 1366587 R COG family: bacterial cell division membraneprotein; Orthologue of BL1322; PFAM_ID: FTSW_RODA_SPOVE; FtsW-like protein complement(1365394..1366587) Bifidobacterium adolescentis ATCC 15703 4556978 YP_909966.1 CDS murD NC_008618.1 1366628 1368067 R COGfamily: UDP-N-acetylmuramoylalanine-D-glutamate ligase; Orthologue of BL1321; PFAM_ID: Mur_ligase; UDP-N-acetylmuramoyl-L-alanyl-D- glutamatesynthetase; UDP-N-acetylmuramoylalanine--D-glutamate ligase complement(1366628..1368067) Bifidobacterium adolescentis ATCC 15703 4556374 YP_909967.1 CDS mraY NC_008618.1 1368144 1369241 R First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase complement(1368144..1369241) Bifidobacterium adolescentis ATCC 15703 4556380 YP_909968.1 CDS murF NC_008618.1 1369291 1370760 R COG family:UDP-N-acetylmuramyl pentapeptide synthase; Orthologue of BL1319; PFAM_ID:Mur_ligase; UDP-MurNAc-pentapeptide synthetase; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase complement(1369291..1370760) Bifidobacterium adolescentis ATCC 15703 4556376 YP_909969.1 CDS BAD_1106 NC_008618.1 1370836 1371693 R COG family: UDP-N-acetylmuramyl tripeptidesynthase; Orthologue of BL1318; hypothetical protein complement(1370836..1371693) Bifidobacterium adolescentis ATCC 15703 4556098 YP_909970.1 CDS ftsI NC_008618.1 1371749 1373551 R COG family: cell divisionprotein FtsI_penicillin-binding protein 2; Orthologue of BL1317; PFAM_ID:Transpeptidase; peptidoglycan synthetase complement(1371749..1373551) Bifidobacterium adolescentis ATCC 15703 4557232 YP_909971.1 CDS BAD_1108 NC_008618.1 1373548 1374009 R Orthologue of SCO2091; hypothetical protein complement(1373548..1374009) Bifidobacterium adolescentis ATCC 15703 4556099 YP_909972.1 CDS mraW NC_008618.1 1374011 1375042 R COG family: predicted S-adenosylmethionine-dependent methyltransferase involvedin cell envelope biogenesis; Orthologue of BL1316; PFAM_ID: Methyltransf_5; S-adenosyl-methyltransferase MraW complement(1374011..1375042) Bifidobacterium adolescentis ATCC 15703 4556419 YP_909973.1 CDS mraZ NC_008618.1 1375042 1375557 R COG family: uncharacterized Bcr; Orthologue of BL1315; PFAM_ID: UPF0040; protein mraZ complement(1375042..1375557) Bifidobacterium adolescentis ATCC 15703 4556420 YP_909974.1 CDS BAD_1111 NC_008618.1 1375818 1378115 D Orthologue of BL1314; hypothetical protein 1375818..1378115 Bifidobacterium adolescentis ATCC 15703 4556100 YP_909975.1 CDS serA NC_008618.1 1378096 1379307 D catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 1378096..1379307 Bifidobacterium adolescentis ATCC 15703 4556711 YP_909976.1 CDS nrdR NC_008618.1 1379424 1379936 R COG family: predicted transcriptional regulator_consists of a Zn-ribbon and ATP-cone domains; Orthologue of BL1312; PFAM_ID:DUF193; transcriptional regulator NrdR complement(1379424..1379936) Bifidobacterium adolescentis ATCC 15703 4556331 YP_909977.1 CDS BAD_1114 NC_008618.1 1379926 1380231 R Orthologue of BL1311; hypothetical protein complement(1379926..1380231) Bifidobacterium adolescentis ATCC 15703 4556101 YP_909978.1 CDS lexA NC_008618.1 1380319 1381092 D Represses a number of genes involved in the response to DNA damage; LexA repressor 1380319..1381092 Bifidobacterium adolescentis ATCC 15703 4556287 YP_909979.1 CDS BAD_1116 NC_008618.1 1381272 1382213 R COG family: Co_Zn_Cd efflux system component; Orthologue of BL1309; PFAM_ID: Cation_efflux; cation efflux protein complement(1381272..1382213) Bifidobacterium adolescentis ATCC 15703 4556102 YP_909980.1 CDS ldh2 NC_008618.1 1382388 1383497 R COG family: malate_lactate dehydrogenases; Orthologue of BL1308; PFAM_ID: Ldh; PFAM_ID: ldh_C; L-lactate dehydrogenase 2 complement(1382388..1383497) Bifidobacterium adolescentis ATCC 15703 4556275 YP_909981.1 CDS hflX NC_008618.1 1383613 1385109 R COG family: GTPases; Orthologue of BL1307; GTP-binding protein complement(1383613..1385109) Bifidobacterium adolescentis ATCC 15703 4556149 YP_909982.1 CDS BAD_1119 NC_008618.1 1385246 1385857 D COG family: 16s RNA g1207 methylase RsmC; Orthologue of BL1306; hypothetical protein 1385246..1385857 Bifidobacterium adolescentis ATCC 15703 4556103 YP_909983.1 CDS hrpA NC_008618.1 1385854 1389963 D Orthologue of ECs2015_BL1305; ATP-dependent helicase 1385854..1389963 Bifidobacterium adolescentis ATCC 15703 4556183 YP_909984.1 CDS BAD_1121 NC_008618.1 1390037 1391062 D Identified by Glimmer2; putative; Orthologue of BURPS1710b_3224; hypothetical protein 1390037..1391062 Bifidobacterium adolescentis ATCC 15703 4556104 YP_909985.1 CDS BAD_1122 NC_008618.1 1391115 1392041 D Orthologue of BL1304; hypothetical protein 1391115..1392041 Bifidobacterium adolescentis ATCC 15703 4556105 YP_909986.1 CDS glnA2 NC_008618.1 1392213 1393550 R Orthologue of Tfu_0982_ BL1302; glutamine synthetase complement(1392213..1393550) Bifidobacterium adolescentis ATCC 15703 4557712 YP_909987.1 CDS hisA NC_008618.1 1393613 1394338 R catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide and the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)anthranilate; involved in histidine and tryptophan biosynthesis; phosphoribosyl isomerase A complement(1393613..1394338) Bifidobacterium adolescentis ATCC 15703 4556150 YP_909988.1 CDS hisH NC_008618.1 1394450 1395097 R with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH complement(1394450..1395097) Bifidobacterium adolescentis ATCC 15703 4556176 YP_909989.1 CDS BAD_1126 NC_008618.1 1395149 1395919 R Orthologue of BCZK0765; hypothetical protein complement(1395149..1395919) Bifidobacterium adolescentis ATCC 15703 4556106 YP_909990.1 CDS hisB NC_008618.1 1395919 1396518 R catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase complement(1395919..1396518) Bifidobacterium adolescentis ATCC 15703 4556151 YP_909991.1 CDS hisC NC_008618.1 1396689 1397864 R catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase complement(1396689..1397864) Bifidobacterium adolescentis ATCC 15703 4556152 YP_909992.1 CDS hisD NC_008618.1 1397861 1399396 R catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase complement(1397861..1399396) Bifidobacterium adolescentis ATCC 15703 4556153 YP_909993.1 CDS dnaE NC_008618.1 1399454 1403044 R catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha complement(1399454..1403044) Bifidobacterium adolescentis ATCC 15703 4556252 YP_909994.1 CDS BAD_1131 NC_008618.1 1403108 1404037 R COG family: pseudouridylate synthases_ 23SRNA-specific; Orthologue of BL0123; PFAM_ID: PseudoU_synth_2; hypothetical protein complement(1403108..1404037) Bifidobacterium adolescentis ATCC 15703 4556107 YP_909995.1 CDS lspA NC_008618.1 1404034 1404597 R lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase complement(1404034..1404597) Bifidobacterium adolescentis ATCC 15703 4556353 YP_909996.1 CDS BAD_1133 NC_008618.1 1404619 1406217 R COG family: ATPase involved in DNA repair; Orthologue of BL0121; hypothetical protein complement(1404619..1406217) Bifidobacterium adolescentis ATCC 15703 4556108 YP_909997.1 CDS BAD_1134 NC_008618.1 1406327 1406608 R COG family: predicted integral membrane protein; Orthologue of BL0120; hypothetical protein complement(1406327..1406608) Bifidobacterium adolescentis ATCC 15703 4556109 YP_909998.1 CDS BAD_1135 NC_008618.1 1406700 1407182 R COG family: uncharacterized Bcr; Orthologue of BL0119; hypothetical protein complement(1406700..1407182) Bifidobacterium adolescentis ATCC 15703 4556110 YP_909999.1 CDS ftsZ NC_008618.1 1407213 1408445 R GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ complement(1407213..1408445) Bifidobacterium adolescentis ATCC 15703 4557237 YP_910000.1 CDS BAD_1137 NC_008618.1 1408622 1409851 R COG family: predicted TIM-barrel enzymes_ possiblydehydrogenases_ NifR3 family; Orthologue of BL0117; PFAM_ID: UPF0034; NifR3-like protein complement(1408622..1409851) Bifidobacterium adolescentis ATCC 15703 4556111 YP_910001.1 CDS glyS NC_008618.1 1409893 1411368 R Catalyzes a two-step reaction, first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase complement(1409893..1411368) Bifidobacterium adolescentis ATCC 15703 4556169 YP_910002.1 CDS BAD_1139 NC_008618.1 1411528 1412679 D Orthologue of NCgl0947; hypothetical protein 1411528..1412679 Bifidobacterium adolescentis ATCC 15703 4556112 YP_910003.1 CDS BAD_1140 NC_008618.1 1412704 1413276 R Orthologue of mll3846; hypothetical protein complement(1412704..1413276) Bifidobacterium adolescentis ATCC 15703 4556113 YP_910004.1 CDS pstC NC_008618.1 1413284 1413874 R Orthologue of CPS_3642; Permease protein; phosphate ABC transporter complement(1413284..1413874) Bifidobacterium adolescentis ATCC 15703 4556599 YP_910005.1 CDS BAD_1142 NC_008618.1 1414584 1415459 R Orthologue of lmo2592; hypothetical protein complement(1414584..1415459) Bifidobacterium adolescentis ATCC 15703 4556114 YP_910006.1 CDS BAD_1143 NC_008618.1 1415612 1416130 D MarR family; Orthologue of ABC2794; transcriptional regulator 1415612..1416130 Bifidobacterium adolescentis ATCC 15703 4556115 YP_910007.1 CDS thiM NC_008618.1 1416412 1417296 D 4-methyl-5-beta-hydroxyethylthiazole kinase; COG family: hydroxyethylthiazole kinase_sugar kinase family; Orthologue of BL0115; PFAM_ID: HK; hydroxyethylthiazole kinase 1416412..1417296 Bifidobacterium adolescentis ATCC 15703 4557641 YP_910008.1 CDS BAD_1145 NC_008618.1 1417440 1418195 D COG family: thiamine biosynthesisprotein ThiC; Orthologue of BL0114; PFAM_ID: TMP-TENI; PFAM_ID: ThiC; bifunctional protein thiEC 1417440..1418195 Bifidobacterium adolescentis ATCC 15703 4556116 YP_910009.1 CDS thiD NC_008618.1 1418324 1419166 D COGfamily: hydroxymethylpyrimidine_phosphomethylpyr imidinekinase; HMP-phosphate kinase; HMP-P kinas; Orthologue of BL0113; phosphomethylpyrimidine kinase 1418324..1419166 Bifidobacterium adolescentis ATCC 15703 4556464 YP_910010.1 CDS BAD_1147 NC_008618.1 1419255 1419620 D COG family: uncharacterized Acr; Orthologue of BL0112; PFAM_ID: DUF77; hypothetical protein 1419255..1419620 Bifidobacterium adolescentis ATCC 15703 4556466 YP_910011.1 CDS BAD_1148 NC_008618.1 1419723 1420766 D COG family: transcriptional regulators; Orthologue of BL0107; PFAM_ID: Peripla_BP_like; PFAM_ID:lacI; LacI-type transcriptional regulator 1419723..1420766 Bifidobacterium adolescentis ATCC 15703 4556467 YP_910012.1 CDS lacY NC_008618.1 1421023 1422444 D lactose/proton symporter; mediates lactose/proton symport through the membrane by utilizing the proton gradient to drive transport of galactosides; member of major facilitator superfamily; functions as a monomer with 12 transmembrane segments; galactoside permease 1421023..1422444 Bifidobacterium adolescentis ATCC 15703 4557581 YP_910013.1 CDS cscA NC_008618.1 1422647 1424203 D COG family: beta-fructosidases(levanase_invertase); Orthologue of BL0105; PFAM_ID: Glyco_hydro_32; beta-fructofuranosidase 1422647..1424203 Bifidobacterium adolescentis ATCC 15703 4557580 YP_910014.1 CDS BAD_1151 NC_008618.1 1424530 1425333 D COG family: ABC- typenitrate_sulfonate_taurine_bicarbonate transport systems_permease components; Orthologue of BL0104; ABC transporter permease 1424530..1425333 Bifidobacterium adolescentis ATCC 15703 4556468 YP_910015.1 CDS BAD_1152 NC_008618.1 1425604 1426671 D COG family: ABC- typenitrate_sulfonate_taurine_bicarbonate transport systems_periplasmic components; Orthologue of BL0103; ABC transporter substrate-binding protein 1425604..1426671 Bifidobacterium adolescentis ATCC 15703 4556469 YP_910016.1 CDS BAD_1153 NC_008618.1 1426765 1428003 D COG family: inosine-uridine nucleosideN-ribohydrolase; Orthologue of BL0102; PFAM_ID: IU_nuc_hydro; inosine-uridine preferring nucleoside hydrolase 1426765..1428003 Bifidobacterium adolescentis ATCC 15703 4556470 YP_910017.1 CDS uppS NC_008618.1 1428161 1428952 R catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate; undecaprenyl pyrophosphate synthase complement(1428161..1428952) Bifidobacterium adolescentis ATCC 15703 4556738 YP_910018.1 CDS recO NC_008618.1 1428958 1429698 R involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO complement(1428958..1429698) Bifidobacterium adolescentis ATCC 15703 4556629 YP_910019.1 CDS BAD_1156 NC_008618.1 1429782 1431533 R COG family: hydrolases of the alpha_betasuperfamily; Orthologue of BL0099; hypothetical protein complement(1429782..1431533) Bifidobacterium adolescentis ATCC 15703 4556471 YP_910020.1 CDS ispG NC_008618.1 1431598 1432797 R catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase complement(1431598..1432797) Bifidobacterium adolescentis ATCC 15703 4556226 YP_910021.1 CDS ispC NC_008618.1 1432862 1434040 R catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase complement(1432862..1434040) Bifidobacterium adolescentis ATCC 15703 4556222 YP_910022.1 CDS BAD_1159 NC_008618.1 1434193 1435932 R Orthologue of BL0096; hypothetical protein complement(1434193..1435932) Bifidobacterium adolescentis ATCC 15703 4556472 YP_910023.1 CDS BAD_1160 NC_008618.1 1436256 1436672 R Orthologue of BL0095; hypothetical protein complement(1436256..1436672) Bifidobacterium adolescentis ATCC 15703 4556473 YP_910024.1 CDS BAD_1161 NC_008618.1 1436791 1437687 R COG family: predicted secreted protein containing aPDZ domain; Orthologue of BL0094; hypothetical protein complement(1436791..1437687) Bifidobacterium adolescentis ATCC 15703 4556474 YP_910025.1 CDS BAD_1162 NC_008618.1 1437759 1439318 D Orthologue of BL0093; hypothetical protein 1437759..1439318 Bifidobacterium adolescentis ATCC 15703 4556475 YP_910026.1 CDS BAD_1163 NC_008618.1 1439301 1440800 R COG family: superfamily I DNA and RNAhelicases; Orthologue of BL0092; PFAM_ID: UvrD-helicase; UvrD; DNA helicase II complement(1439301..1440800) Bifidobacterium adolescentis ATCC 15703 4556476 YP_910027.1 CDS BAD_1164 NC_008618.1 1440914 1442485 D Orthologue of BL0091; hypothetical protein 1440914..1442485 Bifidobacterium adolescentis ATCC 15703 4556477 YP_910028.1 CDS BAD_1165 NC_008618.1 1442887 1443789 R COG family: predicted metal-dependentphosphoesterases (Php family); Orthologue of BL0089; PFAM_ID: PHP_N; hypothetical protein complement(1442887..1443789) Bifidobacterium adolescentis ATCC 15703 4556478 YP_910029.1 CDS BAD_1166 NC_008618.1 1443947 1444573 D Orthologue of BL0088; hypothetical protein 1443947..1444573 Bifidobacterium adolescentis ATCC 15703 4556479 YP_910030.1 CDS dapF NC_008618.1 1444662 1445561 R COG family: diaminopimelateepimerase; Dap epimerase; Orthologue of BL0087; PFAM_ID: DAP_epimerase; diaminopimelate epimerase complement(1444662..1445561) Bifidobacterium adolescentis ATCC 15703 4556243 YP_910031.1 CDS murI NC_008618.1 1445647 1446423 D converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase 1445647..1446423 Bifidobacterium adolescentis ATCC 15703 4556379 YP_910032.1 CDS BAD_1169 NC_008618.1 1446521 1447351 D COG family: predicted esterase of the alpha-betahydrolase superfamily; Orthologue of BL0085; hypothetical protein 1446521..1447351 Bifidobacterium adolescentis ATCC 15703 4556480 YP_910033.1 CDS BAD_1170 NC_008618.1 1447450 1448733 D COG family: PLP-dependent aminotransferase; Orthologue of BL1268; PFAM_ID: aminotran_1_2; aminotransferase 1447450..1448733 Bifidobacterium adolescentis ATCC 15703 4556481 YP_910034.1 CDS BAD_1171 NC_008618.1 1448934 1449479 D COG family: uncharacterized membrane protein; Orthologue of BL0471; hypothetical protein 1448934..1449479 Bifidobacterium adolescentis ATCC 15703 4556482 YP_910035.1 CDS dppA2 NC_008618.1 1449638 1451311 D COG family: ABC-typedipeptide_oligopeptide_nickel transport systems_periplasmic components; Orthologue of BL1386; PFAM_ID:SBP_bac_5; ABC-type transporter 1449638..1451311 Bifidobacterium adolescentis ATCC 15703 4556260 YP_910036.1 CDS BAD_1173 NC_008618.1 1451448 1452428 R COG family:asparaginase; Orthologue of BL1142; PFAM_ID: Asparaginase_2; L-asparagineamidohydrolase complement(1451448..1452428) Bifidobacterium adolescentis ATCC 15703 4556483 YP_910037.1 CDS BAD_1174 NC_008618.1 1452890 1453228 D Orthologue of TTE0858; hypothetical protein 1452890..1453228 Bifidobacterium adolescentis ATCC 15703 4556484 YP_910038.1 CDS topA NC_008618.1 1453235 1453492 R Orthologue of MS0131; CDGSH-type zinc finger protein complement(1453235..1453492) Bifidobacterium adolescentis ATCC 15703 4557657 YP_910039.1 CDS BAD_1176 NC_008618.1 1453495 1453911 R Orthologue of spr0281; hypothetical protein complement(1453495..1453911) Bifidobacterium adolescentis ATCC 15703 4556485 YP_910040.1 CDS BAD_1177 NC_008618.1 1454425 1455480 D Orthologue of CE1244; putative transposase 1454425..1455480 Bifidobacterium adolescentis ATCC 15703 4556862 YP_910041.1 CDS BAD_1178 NC_008618.1 1455514 1455948 D Orthologue of CE1245; insertion element membrane protein 1455514..1455948 Bifidobacterium adolescentis ATCC 15703 4556863 YP_910042.1 CDS cas2 NC_008618.1 1462228 1462518 R CRISPR-associated factor cas2 simular to S. pyogenes; Orthologue of cas2; CRISPR-associated Cas2 family protein complement(1462228..1462518) Bifidobacterium adolescentis ATCC 15703 4557557 YP_910043.1 CDS cas1 NC_008618.1 1462586 1463617 R Orthologue of ABC3592_BH0341; Protein unknown function DUF48; CRISPR-associated DNA polymerase complement(1462586..1463617) Bifidobacterium adolescentis ATCC 15703 4557556 YP_910044.1 CDS cas4 NC_008618.1 1463617 1464294 R COG1468; CRISPR-associated protein; Domain of unknown function DUF83; Exonuclease_RecB family; Orthologue of ABC3593_Cag_1006_SPy1563; hypothetical protein complement(1463617..1464294) Bifidobacterium adolescentis ATCC 15703 4557559 YP_910045.1 CDS BAD_1182 NC_008618.1 1464329 1465174 R Family of unknown function (DUF694)_pfam05107; Orthologue of ebA3286; CRISPR-associated Csh2 family protein complement(1464329..1465174) Bifidobacterium adolescentis ATCC 15703 4556864 YP_910046.1 CDS BAD_1183 NC_008618.1 1465228 1466094 R Orthologue of ebA3288; CRISPR-associated Csd1 family protein complement(1465228..1466094) Bifidobacterium adolescentis ATCC 15703 4556865 YP_910047.1 CDS BAD_1184 NC_008618.1 1466099 1467130 R Orthologue of Cag_1008_BH0338; CRISPR-associated Csd1 family protein complement(1466099..1467130) Bifidobacterium adolescentis ATCC 15703 4556866 YP_910048.1 CDS BAD_1185 NC_008618.1 1467134 1467856 R Orthologue of ebA3290; CRISPR-associated Cas5d family protein complement(1467134..1467856) Bifidobacterium adolescentis ATCC 15703 4556867 YP_910049.1 CDS cas3 NC_008618.1 1468122 1470539 R Orthologue of ebA3291_BH0336; putative CRISPR-associated helicase complement(1468122..1470539) Bifidobacterium adolescentis ATCC 15703 4557558 YP_910050.1 CDS ileS NC_008618.1 1470788 1474120 R IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 2 subfamily; some organisms carry two different copies of this enzyme; in some organisms, the type 2 subfamily is associated with resistance to the antibiotic pseudomonic acid (mupirocin); isoleucyl-tRNA synthetase complement(1470788..1474120) Bifidobacterium adolescentis ATCC 15703 4556190 YP_910051.1 CDS lacS NC_008618.1 1474510 1475982 R COG family: Na+_melibiose symporter andrelated transporters; Orthologue of BL0976; galactoside symporter complement(1474510..1475982) Bifidobacterium adolescentis ATCC 15703 4556273 YP_910052.1 CDS BAD_1189 NC_008618.1 1476252 1477331 R COG family: transcriptional regulators; Orthologue of BL1774; PFAM_ID:lacI; LacI-type transcriptional regulator complement(1476252..1477331) Bifidobacterium adolescentis ATCC 15703 4556868 YP_910053.1 CDS BAD_1190 NC_008618.1 1477495 1478718 D Orthologue of BL1628; hypothetical protein 1477495..1478718 Bifidobacterium adolescentis ATCC 15703 4556869 YP_910054.1 CDS BAD_1191 NC_008618.1 1479088 1481064 R ATP-binding transmembrane protein; Orthologue of CAC3415_BL1767; ABC transporter complement(1479088..1481064) Bifidobacterium adolescentis ATCC 15703 4556870 YP_910055.1 CDS BAD_1192 NC_008618.1 1481172 1482992 R COG family: ABC-type multidrug_protein_lipidtransport system_ ATPase component; Orthologue of BL1766; PFAM_ID: ABC_membrane; PFAM_ID: ABC_tran; ABC transporter ATP-binding protein complement(1481172..1482992) Bifidobacterium adolescentis ATCC 15703 4556871 YP_910056.1 CDS BAD_1193 NC_008618.1 1482993 1483679 R COG family: transcriptional regulators; Orthologue of BL1765; PFAM_ID:MarR; MarR-type transcriptional regulator complement(1482993..1483679) Bifidobacterium adolescentis ATCC 15703 4556872 YP_910057.1 CDS BAD_1194 NC_008618.1 1483898 1486153 R Orthologue of nfa29580; putative beta-glucosidase complement(1483898..1486153) Bifidobacterium adolescentis ATCC 15703 4556873 YP_910058.1 CDS BAD_1195 NC_008618.1 1486370 1486987 D COG family: transcriptional regulator; Orthologue of BL1756; PFAM_ID:tetR; TetR-type transcriptional regulator 1486370..1486987 Bifidobacterium adolescentis ATCC 15703 4556874 YP_910059.1 CDS glxK NC_008618.1 1487043 1488245 D COG family: glycerate kinase; Orthologue of BL0845; PFAM_ID:DUF168; glycerate kinase 1487043..1488245 Bifidobacterium adolescentis ATCC 15703 4556167 YP_910060.1 CDS bglX NC_008618.1 1488571 1491000 R COG family: beta-glucosidase-relatedglycosidases; Gentiobiase; Orthologue of BL1757; PFAM_ID: Glyco_hydro_3; beta-D-glucosideglucohydrolase complement(1488571..1491000) Bifidobacterium adolescentis ATCC 15703 4557551 YP_910061.1 CDS BAD_1198 NC_008618.1 1491088 1491390 R COG family: transcriptional regulator; Orthologue of BL1756; PFAM_ID:tetR; TetR-type transcriptional regulator complement(1491088..1491390) Bifidobacterium adolescentis ATCC 15703 4556875 YP_910062.1 CDS BAD_1199 NC_008618.1 1491507 1492745 D Orthologue of PPA1284; hypothetical protein 1491507..1492745 Bifidobacterium adolescentis ATCC 15703 4556876 YP_910063.1 CDS BAD_1200 NC_008618.1 1492785 1493972 D Orthologue of BLi00227; hypothetical protein 1492785..1493972 Bifidobacterium adolescentis ATCC 15703 4556877 YP_910064.1 CDS BAD_1201 NC_008618.1 1494297 1494932 R COG family: transcriptional regulator; Orthologue of BL1756; PFAM_ID:tetR; TetR-type transcriptional regulator complement(1494297..1494932) Bifidobacterium adolescentis ATCC 15703 4556878 YP_910065.1 CDS BAD_1202 NC_008618.1 1494980 1496179 R COG family: endoglucanase; Orthologue of BL1761; beta-1,3-exoglucanase complement(1494980..1496179) Bifidobacterium adolescentis ATCC 15703 4556879 YP_910066.1 CDS xynB NC_008618.1 1496402 1498048 R Orthologue of BH3683; xylan beta-1,4-xylosidase complement(1496402..1498048) Bifidobacterium adolescentis ATCC 15703 4556764 YP_910067.1 CDS BAD_1204 NC_008618.1 1498111 1499319 R COG family: endoglucanase; Orthologue of BL1761; beta-1,3-exoglucanase complement(1498111..1499319) Bifidobacterium adolescentis ATCC 15703 4556880 YP_910068.1 CDS xsa NC_008618.1 1499594 1501150 R Orthologue of BH1874; alpha-L-arabinofuranosidase complement(1499594..1501150) Bifidobacterium adolescentis ATCC 15703 4556758 YP_910069.1 CDS BAD_1206 NC_008618.1 1501307 1502563 R COG family: permeases of the major facilitatorsuperfamily; Orthologue of BL0777; membrane protein with transport function complement(1501307..1502563) Bifidobacterium adolescentis ATCC 15703 4556881 YP_910070.1 CDS BAD_1207 NC_008618.1 1502796 1503530 D COG family: transcriptional regulator; Orthologue of BL1756; PFAM_ID:tetR; TetR-type transcriptional regulator 1502796..1503530 Bifidobacterium adolescentis ATCC 15703 4556882 YP_910071.1 CDS BAD_1208 NC_008618.1 1503747 1505090 R Orthologue of plu2272; Similar to glucosylceramidase; glucosylceramidase complement(1503747..1505090) Bifidobacterium adolescentis ATCC 15703 4556883 YP_910072.1 CDS BAD_1209 NC_008618.1 1505475 1506800 R COG family: permeases of the major facilitatorsuperfamily; Orthologue of BL0777; membrane protein with transport function complement(1505475..1506800) Bifidobacterium adolescentis ATCC 15703 4556884 YP_910073.1 CDS BAD_1210 NC_008618.1 1507156 1507782 D COG family: transcriptional regulator; Orthologue of BL1756; PFAM_ID:tetR; TetR-type transcriptional regulator 1507156..1507782 Bifidobacterium adolescentis ATCC 15703 4556885 YP_910074.1 CDS bga NC_008618.1 1507816 1509882 R Orthologue of SCO7407_BL1168; beta-galactosidase I complement(1507816..1509882) Bifidobacterium adolescentis ATCC 15703 4557549 YP_910075.1 CDS BAD_1212 NC_008618.1 1510105 1510734 R COG family: transcriptional regulator; Orthologue of BL1756; PFAM_ID:tetR; TetR-type transcriptional regulator complement(1510105..1510734) Bifidobacterium adolescentis ATCC 15703 4556886 YP_910076.1 CDS BAD_1213 NC_008618.1 1510771 1512069 R COG family: gamma-glutamylcysteine synthetase; Gamma-glutamylcysteine synthetase; Orthologue of BL1755; glutamate--cysteine ligase complement(1510771..1512069) Bifidobacterium adolescentis ATCC 15703 4556887 YP_910077.1 CDS yxcA NC_008618.1 1512269 1517038 R Orthologue of L104115_BL1754; Similar to activator of (R)-2-hydroxyglutaryl-CoAdehydratase of Acidaminococcus fermentans; hypothetical protein complement(1512269..1517038) Bifidobacterium adolescentis ATCC 15703 4556780 YP_910078.1 CDS nrdG NC_008618.1 1517226 1517939 R COG family: organic radical activatingenzymes; Class III anaerobic ribonucleotide reductase smallcomponent; Orthologue of BL1753; anaerobic ribonucleoside-triphosphate reductase activating protein complement(1517226..1517939) Bifidobacterium adolescentis ATCC 15703 4556330 YP_910079.1 CDS nrdD NC_008618.1 1517985 1520390 R Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase complement(1517985..1520390) Bifidobacterium adolescentis ATCC 15703 4556388 YP_910080.1 CDS xseA NC_008618.1 1520703 1521983 D bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 1520703..1521983 Bifidobacterium adolescentis ATCC 15703 4556759 YP_910081.1 CDS BAD_1218 NC_008618.1 1522641 1522931 D Orthologue of bll6794; hypothetical protein 1522641..1522931 Bifidobacterium adolescentis ATCC 15703 4556888 YP_910082.1 CDS BAD_1219 NC_008618.1 1522940 1524088 R Orthologue of BL1743; hypothetical protein complement(1522940..1524088) Bifidobacterium adolescentis ATCC 15703 4556889 YP_910083.1 CDS BAD_1220 NC_008618.1 1524197 1524433 R COG0845; Orthologue of HCH_01961; membrane-fusion protein complement(1524197..1524433) Bifidobacterium adolescentis ATCC 15703 4556890 YP_910084.1 CDS BAD_1221 NC_008618.1 1524433 1525023 R CE3P009_ similar to PIR:S76704 percent identity: 37in 153 aa; Orthologue of CE3P009; hypothetical protein complement(1524433..1525023) Bifidobacterium adolescentis ATCC 15703 4556891 YP_910085.1 CDS BAD_1222 NC_008618.1 1525520 1526248 D Orthologue of BL1096; hypothetical protein 1525520..1526248 Bifidobacterium adolescentis ATCC 15703 4556892 YP_910086.1 CDS BAD_1223 NC_008618.1 1526392 1527363 R COG family: exopolyphosphatase; Orthologue of BL1742; PFAM_ID: Ppx-GppA; hypothetical protein complement(1526392..1527363) Bifidobacterium adolescentis ATCC 15703 4556893 YP_910087.1 CDS BAD_1224 NC_008618.1 1527549 1528754 R COG family: PLP-dependent aminotransferases; Orthologue of BL1741; PFAM_ID: aminotran_1_2; aspartate aminotransferase complement(1527549..1528754) Bifidobacterium adolescentis ATCC 15703 4556894 YP_910088.1 CDS vsr NC_008618.1 1528799 1529332 R Orthologue of BL1739; XorII very-short-patch-repair endonuclease complement(1528799..1529332) Bifidobacterium adolescentis ATCC 15703 4556752 YP_910089.1 CDS BAD_1226 NC_008618.1 1529454 1530458 D COG family: predicted dehydrogenases and relatedproteins; Orthologue of BL1740; PFAM_ID: GFO_IDH_MocA; oxidoreductase 1529454..1530458 Bifidobacterium adolescentis ATCC 15703 4556895 YP_910090.1 CDS BAD_1227 NC_008618.1 1530475 1532547 D Orthologue of YPO1440; putative helicase IV 1530475..1532547 Bifidobacterium adolescentis ATCC 15703 4556896 YP_910091.1 CDS BAD_1228 NC_008618.1 1532850 1533620 D COG family: predicted restriction endonuclease; Orthologue of BL0565; restriction endonuclease 1532850..1533620 Bifidobacterium adolescentis ATCC 15703 4556897 YP_910092.1 CDS BAD_1229 NC_008618.1 1533674 1535605 D Orthologue of LMOf2365_0325; putative type II restriction enzyme Sau3AI 1533674..1535605 Bifidobacterium adolescentis ATCC 15703 4556898 YP_910093.1 CDS BAD_1230 NC_008618.1 1535700 1538372 R Orthologue of BCE1021; SNF2 family; helicase complement(1535700..1538372) Bifidobacterium adolescentis ATCC 15703 4556899 YP_910094.1 CDS BAD_1231 NC_008618.1 1538369 1539643 R Orthologue of BCE1020; hypothetical protein complement(1538369..1539643) Bifidobacterium adolescentis ATCC 15703 4556900 YP_910095.1 CDS BAD_1232 NC_008618.1 1539818 1541278 R Orthologue of BL0563; type II restriction enzyme Sau3AI complement(1539818..1541278) Bifidobacterium adolescentis ATCC 15703 4557155 YP_910096.1 CDS BAD_1233 NC_008618.1 1541473 1542747 D COGfamily: site-specific DNA methylase; Cytosine-specific methyltransferase Sau3AI; Orthologue of BL0564; PFAM_ID:DNA_methylase; modification methylase Sau3AI 1541473..1542747 Bifidobacterium adolescentis ATCC 15703 4557156 YP_910097.1 CDS BAD_1234 NC_008618.1 1543406 1543708 R Orthologue of BL0039; hypothetical protein complement(1543406..1543708) Bifidobacterium adolescentis ATCC 15703 4557157 YP_910098.1 CDS orf137 NC_008618.1 1543999 1544448 R Orthologue of Rts1_137; transmembrane protein complement(1543999..1544448) Bifidobacterium adolescentis ATCC 15703 4556340 YP_910099.1 CDS BAD_1236 NC_008618.1 1544767 1545732 R Identified by Glimmer2; putative; Orthologue of BURPS1710b_3414; hypothetical protein complement(1544767..1545732) Bifidobacterium adolescentis ATCC 15703 4557158 YP_910100.1 CDS BAD_1237 NC_008618.1 1545820 1546260 R hypothetical protein complement(1545820..1546260) Bifidobacterium adolescentis ATCC 15703 4557159 YP_910101.1 CDS BAD_1238 NC_008618.1 1546291 1549515 R Orthologue of SCO0948_BL1327_BL1328_BL1329; alpha-mannosidase complement(1546291..1549515) Bifidobacterium adolescentis ATCC 15703 4557160 YP_910102.1 CDS BAD_1239 NC_008618.1 1555714 1556190 D Orthologue of PF1851; Putative hth-type transcriptional regulatoryprotein; putative transcriptional regulator 1555714..1556190 Bifidobacterium adolescentis ATCC 15703 4557161 YP_910103.1 CDS cutE-1 NC_008618.1 1556269 1556664 R Orthologue of TDE1708; apolipoprotein N-acyltransferase complement(1556269..1556664) Bifidobacterium adolescentis ATCC 15703 4556234 YP_910104.1 CDS rep NC_008618.1 1556857 1557993 D Similar to replicase of Bifidobacterium asteroidesplasmid pAP1 encoded by GenBank Accession Number Y11549; replicase 1556857..1557993 Bifidobacterium adolescentis ATCC 15703 4556633 YP_910105.1 CDS BAD_1242 NC_008618.1 1558580 1559764 R COG family: serine_threonine protein kinases; Orthologue of BL1477; hypothetical protein complement(1558580..1559764) Bifidobacterium adolescentis ATCC 15703 4557162 YP_910106.1 CDS BAD_1243 NC_008618.1 1559761 1560942 R Orthologue of nfa36670; hypothetical protein complement(1559761..1560942) Bifidobacterium adolescentis ATCC 15703 4557163 YP_910107.1 CDS BAD_1244 NC_008618.1 1560944 1562710 R Orthologue of BL1479; hypothetical protein complement(1560944..1562710) Bifidobacterium adolescentis ATCC 15703 4557164 YP_910108.1 CDS BAD_1245 NC_008618.1 1562823 1563209 R Orthologue of PP0700; hypothetical protein complement(1562823..1563209) Bifidobacterium adolescentis ATCC 15703 4557165 YP_910109.1 CDS BAD_1246 NC_008618.1 1563206 1564309 R Orthologue of BL1481; hypothetical protein complement(1563206..1564309) Bifidobacterium adolescentis ATCC 15703 4557166 YP_910110.1 CDS cheA NC_008618.1 1564397 1564906 R Orthologue of BH2970; two-component sensor histidine kinase involved in chemotaxis complement(1564397..1564906) Bifidobacterium adolescentis ATCC 15703 4557564 YP_910111.1 CDS BAD_1248 NC_008618.1 1565316 1566815 R COG family: ATP-dependent Lon protease_ bacterialtype; Orthologue of BL1483; hypothetical protein complement(1565316..1566815) Bifidobacterium adolescentis ATCC 15703 4557167 YP_910112.1 CDS BAD_1249 NC_008618.1 1566872 1568359 R Orthologue of BL1484; hypothetical protein complement(1566872..1568359) Bifidobacterium adolescentis ATCC 15703 4557168 YP_910113.1 CDS BAD_1250 NC_008618.1 1568360 1570483 R Orthologue of BL1485; hypothetical protein complement(1568360..1570483) Bifidobacterium adolescentis ATCC 15703 4557169 YP_910114.1 CDS BAD_1251 NC_008618.1 1570742 1571512 D Orthologue of gbs0828; Similar to unknown proteins; hypothetical protein 1570742..1571512 Bifidobacterium adolescentis ATCC 15703 4557170 YP_910115.1 CDS BAD_1252 NC_008618.1 1571579 1572124 D Orthologue of BL1486a; hypothetical protein 1571579..1572124 Bifidobacterium adolescentis ATCC 15703 4557171 YP_910116.1 CDS BAD_1253 NC_008618.1 1573493 1574881 R Orthologue of XAC3660; hypothetical protein complement(1573493..1574881) Bifidobacterium adolescentis ATCC 15703 4557172 YP_910117.1 CDS BAD_1254 NC_008618.1 1575190 1575492 D Orthologue of MA2939; hypothetical protein 1575190..1575492 Bifidobacterium adolescentis ATCC 15703 4557173 YP_910118.1 CDS cysD-2 NC_008618.1 1576070 1577377 R Orthologue of BURPS1710b_2649; sulfate adenylyltransferase complement(1576070..1577377) Bifidobacterium adolescentis ATCC 15703 4556236 YP_910119.1 CDS BAD_1256 NC_008618.1 1577793 1578710 D Orthologue of SSP0620; putative ABC-type amino acid transport system periplasmic component 1577793..1578710 Bifidobacterium adolescentis ATCC 15703 4557270 YP_910120.1 CDS BAD_1257 NC_008618.1 1578884 1579408 D Identified by match to protein family HMM PF05591; Orthologue of BURPS1710b_A1695; hypothetical protein 1578884..1579408 Bifidobacterium adolescentis ATCC 15703 4557271 YP_910121.1 CDS BAD_1258 NC_008618.1 1579424 1580134 D hypothetical protein 1579424..1580134 Bifidobacterium adolescentis ATCC 15703 4557272 YP_910122.1 CDS BAD_1259 NC_008618.1 1580188 1580685 D Identified by Glimmer2; putative; Orthologue of TDE2362; hypothetical protein 1580188..1580685 Bifidobacterium adolescentis ATCC 15703 4557273 YP_910123.1 CDS yckI NC_008618.1 1580701 1581468 D Orthologue of BLi00418; glutamine ABC transporter ATP-binding protein 1580701..1581468 Bifidobacterium adolescentis ATCC 15703 4556767 YP_910124.1 CDS BAD_1261 NC_008618.1 1581537 1581971 R Orthologue of STH257; NAD/NADP octopine/nopaline dehydrogenase complement(1581537..1581971) Bifidobacterium adolescentis ATCC 15703 4557274 YP_910125.1 CDS BAD_1262 NC_008618.1 1581881 1582606 R Orthologue of PP4452; hypothetical protein complement(1581881..1582606) Bifidobacterium adolescentis ATCC 15703 4557275 YP_910126.1 CDS BAD_1263 NC_008618.1 1583246 1584520 R Orthologue of BL1467; TraG-like protein complement(1583246..1584520) Bifidobacterium adolescentis ATCC 15703 4557276 YP_910127.1 CDS BAD_1264 NC_008618.1 1585071 1585982 D Orthologue of c4663; hypothetical protein 1585071..1585982 Bifidobacterium adolescentis ATCC 15703 4557277 YP_910128.1 CDS BAD_1265 NC_008618.1 1586394 1586576 R Orthologue of XCV3785_lpl1808; Similar to proline iminopeptidase; hypothetical protein complement(1586394..1586576) Bifidobacterium adolescentis ATCC 15703 4557278 YP_910129.1 CDS BAD_1266 NC_008618.1 1586799 1587137 R hypothetical protein complement(1586799..1587137) Bifidobacterium adolescentis ATCC 15703 4557279 YP_910130.1 CDS BAD_1267 NC_008618.1 1587161 1587427 R LuxR family; Orthologue of BMA3290; DNA-binding response regulator complement(1587161..1587427) Bifidobacterium adolescentis ATCC 15703 4557280 YP_910131.1 CDS BAD_1268 NC_008618.1 1587588 1588211 R LuxR family; Orthologue of BMA3290; DNA-binding response regulator complement(1587588..1588211) Bifidobacterium adolescentis ATCC 15703 4557281 YP_910132.1 CDS BAD_1269 NC_008618.1 1588337 1588840 D Orthologue of STH3037; hypothetical protein 1588337..1588840 Bifidobacterium adolescentis ATCC 15703 4557282 YP_910133.1 CDS BAD_1270 NC_008618.1 1589047 1589484 D Orthologue of SCO6919; hypothetical protein 1589047..1589484 Bifidobacterium adolescentis ATCC 15703 4557283 YP_910134.1 CDS speE NC_008618.1 1589494 1589784 D Catalyzes the formation of spermidine fromputrescine and S-adenosylmethioninamine; Orthologue of STM0166; spermidine synthase (putrescine aminopropyltransferase) 1589494..1589784 Bifidobacterium adolescentis ATCC 15703 4556452 YP_910135.1 CDS BAD_1272 NC_008618.1 1589796 1591151 D Orthologue of pnf2870; hypothetical protein 1589796..1591151 Bifidobacterium adolescentis ATCC 15703 4557284 YP_910136.1 CDS BAD_1273 NC_008618.1 1591841 1592440 D Orthologue of CE3P009; hypothetical protein 1591841..1592440 Bifidobacterium adolescentis ATCC 15703 4557285 YP_910137.1 CDS ptsG NC_008618.1 1592437 1592673 D Orthologue of MYPE1730; PTS system glucose-specific transporter subunit IIABC 1592437..1592673 Bifidobacterium adolescentis ATCC 15703 4556686 YP_910138.1 CDS BAD_1275 NC_008618.1 1592777 1593067 R Orthologue of M6_Spy1667; hypothetical protein complement(1592777..1593067) Bifidobacterium adolescentis ATCC 15703 4557286 YP_910139.1 CDS BAD_1276 NC_008618.1 1593668 1594378 D Orthologue of DP2366; hypothetical protein 1593668..1594378 Bifidobacterium adolescentis ATCC 15703 4557287 YP_910140.1 CDS BAD_1277 NC_008618.1 1594742 1595275 D Orthologue of STH2159; cobalt ABC transporter ATP-binding protein 1594742..1595275 Bifidobacterium adolescentis ATCC 15703 4557288 YP_910141.1 CDS fhaB NC_008618.1 1595347 1596636 D Orthologue of XAC1815; filamentous hemagglutinin 1595347..1596636 Bifidobacterium adolescentis ATCC 15703 4556966 YP_910142.1 CDS tnp NC_008618.1 1596702 1598057 R Orthologue of Atu5353; IS3 family transposase complement(1596702..1598057) Bifidobacterium adolescentis ATCC 15703 4557652 YP_910143.1 CDS BAD_1280 NC_008618.1 1598193 1598696 D Orthologue of BC0939; type II restriction-modification systemrestriction subunit 1598193..1598696 Bifidobacterium adolescentis ATCC 15703 4557289 YP_910144.1 CDS BAD_1281 NC_008618.1 1598693 1600111 D Orthologue of BC0940; type II restriction-modification systemrestriction subunit 1598693..1600111 Bifidobacterium adolescentis ATCC 15703 4557290 YP_910145.1 CDS kpn2kIR NC_008618.1 1600108 1601010 D Orthologue of kpn2kIR; restriction endonuclease RKpn2kI 1600108..1601010 Bifidobacterium adolescentis ATCC 15703 4556231 YP_910146.1 CDS kpn2kIM NC_008618.1 1601062 1602213 R Orthologue of Kpn2; DNA-methyltransferase MKpn2kI complement(1601062..1602213) Bifidobacterium adolescentis ATCC 15703 4556230 YP_910147.1 CDS invA NC_008618.1 1602318 1602932 R Defines one boundary of pathogenicity island; Orthologue of p103_22; DNA invertase-like protein complement(1602318..1602932) Bifidobacterium adolescentis ATCC 15703 4556221 YP_910148.1 CDS BAD_1285 NC_008618.1 1603384 1604364 D Identified by Glimmer2; putative; Orthologue of SERP2454; hypothetical protein 1603384..1604364 Bifidobacterium adolescentis ATCC 15703 4557291 YP_910149.1 CDS BAD_1286 NC_008618.1 1604706 1604993 D Orthologue of PFL_4163; protein kinase 1604706..1604993 Bifidobacterium adolescentis ATCC 15703 4557292 YP_910150.1 CDS BAD_1287 NC_008618.1 1605189 1606364 R Function Code: 5.1 Central Intermediary Metabolism:Degradation of polysaccharides; Orthologue of PF0442; beta-glucosidase complement(1605189..1606364) Bifidobacterium adolescentis ATCC 15703 4557293 YP_910151.1 CDS BAD_1288 NC_008618.1 1606376 1607254 R Orthologue of lmo1732; Permease protein; sugar ABC transporter complement(1606376..1607254) Bifidobacterium adolescentis ATCC 15703 4557294 YP_910152.1 CDS malF NC_008618.1 1607256 1608173 R Orthologue of PD1465; sugar ABC transporter permease complement(1607256..1608173) Bifidobacterium adolescentis ATCC 15703 4556359 YP_910153.1 CDS BAD_1290 NC_008618.1 1608178 1609476 R Orthologue of lin1841; sugar ABC transporter binding protein complement(1608178..1609476) Bifidobacterium adolescentis ATCC 15703 4557295 YP_910154.1 CDS rbsR NC_008618.1 1609583 1610719 R Orthologue of SRU_2839; ribose operon repressor complement(1609583..1610719) Bifidobacterium adolescentis ATCC 15703 4556620 YP_910155.1 CDS BAD_1292 NC_008618.1 1616830 1618374 R COG family: DNA polymerase III epsilon subunit andrelated 3'-5' exonucleases; COG0847; DNA polymerase III complement(1616830..1618374) Bifidobacterium adolescentis ATCC 15703 4557296 YP_910156.1 CDS def NC_008618.1 1618611 1619267 R cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase complement(1618611..1619267) Bifidobacterium adolescentis ATCC 15703 4556246 YP_910157.1 CDS glmM NC_008618.1 1619291 1620670 R catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase complement(1619291..1620670) Bifidobacterium adolescentis ATCC 15703 4556422 YP_910158.1 CDS pepN NC_008618.1 1621274 1623883 R Orthologue of Rv2467_BL1191; Probable pepN_aminopeptidase N (EC 3.4.11.2); aminopeptidase N complement(1621274..1623883) Bifidobacterium adolescentis ATCC 15703 4556556 YP_910159.1 CDS BAD_1296 NC_008618.1 1623971 1625950 R Orthologue of Tfu_0792_BL1192; hypothetical protein complement(1623971..1625950) Bifidobacterium adolescentis ATCC 15703 4557297 YP_910160.1 CDS dapA NC_008618.1 1626060 1626980 R catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase complement(1626060..1626980) Bifidobacterium adolescentis ATCC 15703 4556240 YP_910161.1 CDS BAD_1298 NC_008618.1 1627036 1628430 R Orthologue of PA1626; MFS family transporter complement(1627036..1628430) Bifidobacterium adolescentis ATCC 15703 4557298 YP_910162.1 CDS BAD_1299 NC_008618.1 1628414 1629301 R Orthologue of YPTB0864; RpiR family transcriptional regulatory protein complement(1628414..1629301) Bifidobacterium adolescentis ATCC 15703 4557299 YP_910163.1 CDS pucH NC_008618.1 1629544 1630380 D Orthologue of SAV1996; putative allantoinase 1629544..1630380 Bifidobacterium adolescentis ATCC 15703 4556688 YP_910164.1 CDS actP NC_008618.1 1630481 1633483 R Orthologue of SMa1013; Silver efflux P-type ATPase [Psychrobacter arcticus 273-4]; Start changed for RBS and homology with other ATPases; ActP copper transport ATPase complement(1630481..1633483) Bifidobacterium adolescentis ATCC 15703 4557195 YP_910165.1 CDS BAD_1302 NC_008618.1 1633572 1633862 D COG family: uncharacterized Bcr; Orthologue of BL0408; PFAM_ID: DUF156; hypothetical protein 1633572..1633862 Bifidobacterium adolescentis ATCC 15703 4557300 YP_910166.1 CDS dapB NC_008618.1 1633940 1634803 R catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase complement(1633940..1634803) Bifidobacterium adolescentis ATCC 15703 4556241 YP_910167.1 CDS BAD_1304 NC_008618.1 1634863 1636236 R COG family: permeases of the major facilitatorsuperfamily; Orthologue of BL1195; transporter complement(1634863..1636236) Bifidobacterium adolescentis ATCC 15703 4557301 YP_910168.1 CDS BAD_1305 NC_008618.1 1636410 1640480 R COG family: superfamily I DNA and RNA helicases; Orthologue of BL1196; PFAM_ID:UvrD-helicase; ATP-dependent DNA helicase complement(1636410..1640480) Bifidobacterium adolescentis ATCC 15703 4557302 YP_910169.1 CDS BAD_1306 NC_008618.1 1640507 1643704 R COG family: superfamily I DNA and RNA helicases; Orthologue of BL1197; hypothetical protein complement(1640507..1643704) Bifidobacterium adolescentis ATCC 15703 4557303 YP_910170.1 CDS BAD_1307 NC_008618.1 1643718 1644221 R COG family: superfamily I DNA and RNA helicases; Identified by Glimmer2; putative; Orthologue of BMAA1451.2; hypothetical protein complement(1643718..1644221) Bifidobacterium adolescentis ATCC 15703 4557304 YP_910171.1 CDS BAD_1308 NC_008618.1 1644742 1645815 R Orthologue of LSA1706; beta-lactamase complement(1644742..1645815) Bifidobacterium adolescentis ATCC 15703 4557305 YP_910172.1 CDS BAD_1309 NC_008618.1 1645825 1647072 R Orthologue of BL1013; hypothetical protein complement(1645825..1647072) Bifidobacterium adolescentis ATCC 15703 4557306 YP_910173.1 CDS BAD_1310 NC_008618.1 1647280 1648701 D COG family: serine_threonine protein kinases; PFAM_ID: pkinase; serine_threonine protein kinase 1647280..1648701 Bifidobacterium adolescentis ATCC 15703 4557307 YP_910174.1 CDS BAD_1311 NC_008618.1 1648781 1654906 D Orthologue of BL1199; fibronectin type III domain-containing protein 1648781..1654906 Bifidobacterium adolescentis ATCC 15703 4557308 YP_910175.1 CDS moxR NC_008618.1 1654979 1656328 D COG family: MoxR-like ATPases; Orthologue of BL1199a; PFAM_ID:Mg_chelatase; methanol dehydrogenase regulatory protein 1654979..1656328 Bifidobacterium adolescentis ATCC 15703 4556418 YP_910176.1 CDS BAD_1313 NC_008618.1 1656378 1657598 D COG family: uncharacterized Acr; Orthologue of BL1200; PFAM_ID: DUF58; hypothetical protein 1656378..1657598 Bifidobacterium adolescentis ATCC 15703 4557446 YP_910177.1 CDS BAD_1314 NC_008618.1 1657595 1660066 D COG family: transglutaminase-like enzymes_ putativecysteine proteases; Orthologue of BL1201; PFAM_ID: Transglut_core; hypothetical protein 1657595..1660066 Bifidobacterium adolescentis ATCC 15703 4557447 YP_910178.1 CDS ppp NC_008618.1 1660063 1660923 D COG family: protein serine_threoninephosphatases; Orthologue of BL1202; PFAM_ID: PP2C; phosphoprotein phosphatase 1660063..1660923 Bifidobacterium adolescentis ATCC 15703 4556581 YP_910179.1 CDS BAD_1316 NC_008618.1 1660954 1661694 D Orthologue of BL1551; hypothetical protein 1660954..1661694 Bifidobacterium adolescentis ATCC 15703 4557448 YP_910180.1 CDS BAD_1317 NC_008618.1 1661856 1662524 R Orthologue of ACIAD0295; hypothetical protein complement(1661856..1662524) Bifidobacterium adolescentis ATCC 15703 4557449 YP_910181.1 CDS rpoC NC_008618.1 1662954 1666967 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' complement(1662954..1666967) Bifidobacterium adolescentis ATCC 15703 4556644 YP_910182.1 CDS rpoB NC_008618.1 1667064 1670561 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta complement(1667064..1670561) Bifidobacterium adolescentis ATCC 15703 4556643 YP_910183.1 CDS BAD_1320 NC_008618.1 1670786 1671430 R Orthologue of BL1206; hypothetical protein complement(1670786..1671430) Bifidobacterium adolescentis ATCC 15703 4557450 YP_910184.1 CDS mutY NC_008618.1 1671499 1672521 R COG family: A_G-specific DNA glycosylase; Orthologue of BL1207; PFAM_ID: HhH-GPD; A/G-specific adenine glycosylase complement(1671499..1672521) Bifidobacterium adolescentis ATCC 15703 4556382 YP_910185.1 CDS yibK NC_008618.1 1672698 1673207 D COG family: predicted rRNA methylase (SpoUclass); Orthologue of BL1208; PFAM_ID: SpoU_methylase; RNA methyltransferase 1672698..1673207 Bifidobacterium adolescentis ATCC 15703 4556772 YP_910186.1 CDS BAD_1323 NC_008618.1 1673276 1674640 R COG family: uncharacterized Acr; Orthologue of BL1209; hypothetical protein complement(1673276..1674640) Bifidobacterium adolescentis ATCC 15703 4557451 YP_910187.1 CDS BAD_1324 NC_008618.1 1674707 1674979 R ACT domain-containing protein; hypothetical protein complement(1674707..1674979) Bifidobacterium adolescentis ATCC 15703 4557452 YP_910188.1 CDS BAD_1325 NC_008618.1 1675353 1677266 R Orthologue of BLi04178; beta-fructofuranosidase complement(1675353..1677266) Bifidobacterium adolescentis ATCC 15703 4557453 YP_910189.1 CDS BAD_1326 NC_008618.1 1677335 1678423 R COG family: transcriptional regulators; Orthologue of BL0107; PFAM_ID: Peripla_BP_like; PFAM_ID:lacI; LacI-type transcriptional regulator complement(1677335..1678423) Bifidobacterium adolescentis ATCC 15703 4557454 YP_910190.1 CDS yteU NC_008618.1 1678459 1679127 R Orthologue of BSU30090; hypothetical protein complement(1678459..1679127) Bifidobacterium adolescentis ATCC 15703 4556776 YP_910191.1 CDS BAD_1328 NC_008618.1 1679144 1680082 R Orthologue of ABC3118; sugar ABC transporter permease complement(1679144..1680082) Bifidobacterium adolescentis ATCC 15703 4557455 YP_910192.1 CDS BAD_1329 NC_008618.1 1680095 1681123 R Orthologue of ABC0361; polysaccharide ABC transporter permease complement(1680095..1681123) Bifidobacterium adolescentis ATCC 15703 4557456 YP_910193.1 CDS BAD_1330 NC_008618.1 1681173 1682780 R Orthologue of SP1796; Substrate-binding protein; ABC transporter complement(1681173..1682780) Bifidobacterium adolescentis ATCC 15703 4557457 YP_910194.1 CDS galK NC_008618.1 1683386 1684636 R COG family: galactokinase; Orthologue of BL1210; PFAM_ID: GHMP_kinases; galactokinase complement(1683386..1684636) Bifidobacterium adolescentis ATCC 15703 4557242 YP_910195.1 CDS galT1 NC_008618.1 1684668 1685918 R COG family: galactose-1- phosphateuridylyltransferase; Orthologue of BL1211; PFAM_ID: GalP_UDP_transf; PFAM_ID:GalP_UDP_tr_C; galactose-1-phosphate uridylyltransferase complement(1684668..1685918) Bifidobacterium adolescentis ATCC 15703 4557243 YP_910196.1 CDS BAD_1333 NC_008618.1 1685923 1686744 R COG family: transcriptional regulators of sugarmetabolism; Orthologue of BL1212; PFAM_ID: deoR; PFAM_ID: gntR; DeoR-type transcriptional regulator complement(1685923..1686744) Bifidobacterium adolescentis ATCC 15703 4557458 YP_910197.1 CDS BAD_1334 NC_008618.1 1687064 1688077 D catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 1687064..1688077 Bifidobacterium adolescentis ATCC 15703 4557459 YP_910198.1 CDS baiC NC_008618.1 1688343 1689464 R COG family: NADH; Orthologue of BL1214; PFAM_ID: oxidored_FMN; NADH-dependent flavin oxidoreductase YqjM complement(1688343..1689464) Bifidobacterium adolescentis ATCC 15703 4557548 YP_910199.1 CDS BAD_1336 NC_008618.1 1689690 1691990 R COG family: membrane carboxypeptidase(penicillin-binding protein); Orthologue of BL1215; PFAM_ID: Transglycosyl; PFAM_ID: Transpeptidase; penicillin-binding protein complement(1689690..1691990) Bifidobacterium adolescentis ATCC 15703 4557460 YP_910200.1 CDS BAD_1337 NC_008618.1 1692115 1692903 R COG family: cAMP-binding domains - catabolite geneactivator and regulatory subunit of cAMP-dependent proteinkinases; Orthologue of BL1216; PFAM_ID: cNMP_binding; PFAM_ID: crp; transcriptional regulator complement(1692115..1692903) Bifidobacterium adolescentis ATCC 15703 4557461 YP_910201.1 CDS snoP NC_008618.1 1692947 1694284 R COG family: lipoate-protein ligase A; Orthologue of BL1217; PFAM_ID: BPL_LipA_LipB; lipoate protein ligase complement(1692947..1694284) Bifidobacterium adolescentis ATCC 15703 4556451 YP_910202.1 CDS BAD_1339 NC_008618.1 1694284 1695171 R COG family: predicted membrane protein; Orthologue of BL0040; hypothetical protein complement(1694284..1695171) Bifidobacterium adolescentis ATCC 15703 4557462 YP_910203.1 CDS leuB NC_008618.1 1695349 1696389 R catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase complement(1695349..1696389) Bifidobacterium adolescentis ATCC 15703 4556278 YP_910204.1 CDS BAD_1341 NC_008618.1 1696654 1697136 R Identified by Glimmer2; putative; Orthologue of BURPS1710b_0275; hypothetical protein complement(1696654..1697136) Bifidobacterium adolescentis ATCC 15703 4557463 YP_910205.1 CDS ptrB NC_008618.1 1698038 1700572 R COG family: protease II; Orthologue of BL1219; PFAM_ID: Peptidase_S9; oligo peptidase B; PtrB; protease II complement(1698038..1700572) Bifidobacterium adolescentis ATCC 15703 4556684 YP_910206.1 CDS BAD_1343 NC_008618.1 1700616 1701830 R Orthologue of BL1220; hypothetical protein complement(1700616..1701830) Bifidobacterium adolescentis ATCC 15703 4557464 YP_910207.1 CDS gcvH NC_008618.1 1702020 1702469 R COG family: glycine cleavage system H protein(lipoate-binding); Orthologue of BL1221; PFAM_ID: GCV_H; glycine cleavage system H protein complement(1702020..1702469) Bifidobacterium adolescentis ATCC 15703 4557700 YP_910208.1 CDS BAD_1345 NC_008618.1 1702480 1704354 R COG family: uncharacterized Bcr; Orthologue of BL1154; hypothetical protein complement(1702480..1704354) Bifidobacterium adolescentis ATCC 15703 4557465 YP_910209.1 CDS BAD_1346 NC_008618.1 1704462 1705559 R COG family: NTP pyrophosphohydrolases containing aZn-finger_ probably nucleic-acid-binding; Orthologue of BL1222; PFAM_ID: NUDIX; hypothetical protein complement(1704462..1705559) Bifidobacterium adolescentis ATCC 15703 4557525 YP_910210.1 CDS BAD_1347 NC_008618.1 1705707 1706567 R COG family: predicted hydrolases oracyltransferases (alpha_beta hydrolase superfamily); Orthologue of BL1223; PFAM_ID: abhydrolase; alpha beta hydrolase complement(1705707..1706567) Bifidobacterium adolescentis ATCC 15703 4557526 YP_910211.1 CDS BAD_1348 NC_008618.1 1706640 1707260 R Orthologue of BL1224; hypothetical protein complement(1706640..1707260) Bifidobacterium adolescentis ATCC 15703 4557527 YP_910212.1 CDS trxA2 NC_008618.1 1707458 1707862 D COG family: thiol-disulfide isomerase andthioredoxins; Orthologue of BL1226; PFAM_ID: thiored; thioredoxin 1707458..1707862 Bifidobacterium adolescentis ATCC 15703 4556728 YP_910213.1 CDS BAD_1350 NC_008618.1 1708021 1709016 D COG family: uncharacterized Bcr; Orthologue of BL1227; hypothetical protein 1708021..1709016 Bifidobacterium adolescentis ATCC 15703 4557528 YP_910214.1 CDS lpp NC_008618.1 1709382 1709594 D Orthologue of MSC_0013; prolipoprotein 1709382..1709594 Bifidobacterium adolescentis ATCC 15703 4556352 YP_910215.1 CDS BAD_1352 NC_008618.1 1709897 1710904 D Orthologue of BL0054; hypothetical protein 1709897..1710904 Bifidobacterium adolescentis ATCC 15703 4557529 YP_910216.1 CDS BAD_1353 NC_008618.1 1711018 1711473 R COG family: ribosomal protein L11; Orthologue of BL1230; hypothetical protein complement(1711018..1711473) Bifidobacterium adolescentis ATCC 15703 4557530 YP_910217.1 CDS BAD_1354 NC_008618.1 1711687 1712757 R Orthologue of BL1511; hypothetical protein complement(1711687..1712757) Bifidobacterium adolescentis ATCC 15703 4557531 YP_910218.1 CDS BAD_1355 NC_008618.1 1713149 1713466 D Orthologue of MM2895; transcriptional regulator 1713149..1713466 Bifidobacterium adolescentis ATCC 15703 4557532 YP_910219.1 CDS BAD_1356 NC_008618.1 1713713 1714243 D Orthologue of BL0158; hypothetical protein 1713713..1714243 Bifidobacterium adolescentis ATCC 15703 4557533 YP_910220.1 CDS BAD_1357 NC_008618.1 1714369 1714905 D COG family: protein-tyrosine-phosphatase; Orthologue of BL0248; PFAM_ID:LMWPc; hypothetical protein 1714369..1714905 Bifidobacterium adolescentis ATCC 15703 4557534 YP_910221.1 CDS BAD_1358 NC_008618.1 1715043 1716539 D COG family: ATPases involved in chromosomepartitioning; Orthologue of BL1229; Etk-like tyrosine kinase 1715043..1716539 Bifidobacterium adolescentis ATCC 15703 4557535 YP_910222.1 CDS BAD_1359 NC_008618.1 1716673 1717113 D Orthologue of EF3176; hypothetical protein 1716673..1717113 Bifidobacterium adolescentis ATCC 15703 4557536 YP_910223.1 CDS BAD_1360 NC_008618.1 1717114 1718088 R Orthologue of VPA1455; hypothetical protein complement(1717114..1718088) Bifidobacterium adolescentis ATCC 15703 4557537 YP_910224.1 CDS BAD_1361 NC_008618.1 1718316 1718732 D Orthologue of Tcr_0703; Rne/Rng family; ribonuclease 1718316..1718732 Bifidobacterium adolescentis ATCC 15703 4557538 YP_910225.1 CDS BAD_1362 NC_008618.1 1718779 1719087 R Orthologue of lmo1415; hydroxymethylglutaryl-CoA synthase complement(1718779..1719087) Bifidobacterium adolescentis ATCC 15703 4557539 YP_910226.1 CDS oppA NC_008618.1 1719103 1719474 R Identified by sequence similarity; Orthologue of Lxx08530; Solute-binding protein; ABC transporter complement(1719103..1719474) Bifidobacterium adolescentis ATCC 15703 4556336 YP_910227.1 CDS BAD_1364 NC_008618.1 1719489 1719983 R Orthologue of cg2040; putative transcriptional regulator complement(1719489..1719983) Bifidobacterium adolescentis ATCC 15703 4557540 YP_910228.1 CDS BAD_1365 NC_008618.1 1720169 1721080 D Orthologue of RSc2066; hypothetical protein 1720169..1721080 Bifidobacterium adolescentis ATCC 15703 4557541 YP_910229.1 CDS BAD_1366 NC_008618.1 1721512 1722939 R Orthologue of CE1462; hypothetical protein complement(1721512..1722939) Bifidobacterium adolescentis ATCC 15703 4557542 YP_910230.1 CDS BAD_1367 NC_008618.1 1723289 1724071 D Orthologue of bll2163; putative transposase 1723289..1724071 Bifidobacterium adolescentis ATCC 15703 4557543 YP_910231.1 CDS BAD_1368 NC_008618.1 1725186 1726190 D Orthologue of Cag_1061; phage AbiD protein 1725186..1726190 Bifidobacterium adolescentis ATCC 15703 4557466 YP_910232.1 CDS BAD_1369 NC_008618.1 1726660 1727646 R Identified by match to PFAM protein family HMMPF00665; Orthologue of SAG1229; ISSdy1_ transposase OrfB complement(1726660..1727646) Bifidobacterium adolescentis ATCC 15703 4557467 YP_910233.1 CDS BAD_1370 NC_008618.1 1727786 1728859 D Orthologue of SAG1270; ImpB/MucB/SamB family protein 1727786..1728859 Bifidobacterium adolescentis ATCC 15703 4557468 YP_910234.1 CDS BAD_1371 NC_008618.1 1728997 1729410 D Orthologue of BT1223; Na+/H+-dicarboxylate symporter 1728997..1729410 Bifidobacterium adolescentis ATCC 15703 4557469 YP_910235.1 CDS yvgS NC_008618.1 1729361 1729624 R Identified by match to protein family HMM PF05193; Orthologue of PFL_5859_BLi03533; hypothetical protein complement(1729361..1729624) Bifidobacterium adolescentis ATCC 15703 4556778 YP_910236.1 CDS tnpB NC_008618.1 1729739 1730671 R transposase subunit B complement(1729739..1730671) Bifidobacterium adolescentis ATCC 15703 4557654 YP_910237.1 CDS tnp NC_008618.1 1730912 1732180 R Identified by sequence similarity; putative; Orthologue of Atu5353; IS3 family transposase complement(1730912..1732180) Bifidobacterium adolescentis ATCC 15703 4557653 YP_910238.1 CDS BAD_1375 NC_008618.1 1733917 1735380 D Orthologue of CE1244; putative transposase 1733917..1735380 Bifidobacterium adolescentis ATCC 15703 4557470 YP_910239.1 CDS BAD_1376 NC_008618.1 1735451 1736155 D Orthologue of CE1245; insertion element membrane protein 1735451..1736155 Bifidobacterium adolescentis ATCC 15703 4557471 YP_910240.1 CDS BAD_1377 NC_008618.1 1736388 1736720 R Orthologue of Rv3474; Possible transposase; insertion element IS6110 membrane protein complement(1736388..1736720) Bifidobacterium adolescentis ATCC 15703 4557472 YP_910241.1 CDS BAD_1378 NC_008618.1 1736813 1737055 D Orthologue of XF1091; hypothetical protein 1736813..1737055 Bifidobacterium adolescentis ATCC 15703 4557473 YP_910242.1 CDS BAD_1379 NC_008618.1 1737181 1738248 R Orthologue of BLi00680; hypothetical protein complement(1737181..1738248) Bifidobacterium adolescentis ATCC 15703 4557474 YP_910243.1 CDS BAD_1380 NC_008618.1 1738378 1739436 R Orthologue of BT1710; putative O-antigen polymerase complement(1738378..1739436) Bifidobacterium adolescentis ATCC 15703 4557475 YP_910244.1 CDS fhiA NC_008618.1 1739543 1739779 R Identified by sequence similarity; Orthologue of CV3007; fhiA protein complement(1739543..1739779) Bifidobacterium adolescentis ATCC 15703 4556967 YP_910245.1 CDS BAD_1382 NC_008618.1 1739864 1740835 R Orthologue of BF0187; Similar to Lactobacillus delbrueckiiglycosyltransferase EpsJ; hypothetical protein complement(1739864..1740835) Bifidobacterium adolescentis ATCC 15703 4557476 YP_910246.1 CDS BAD_1383 NC_008618.1 1740832 1741941 R Orthologue of BF2794; Similar to Bacteroides thetaiotaomicron conservedhypothetical protein BT0042; hypothetical protein complement(1740832..1741941) Bifidobacterium adolescentis ATCC 15703 4557477 YP_910247.1 CDS capG NC_008618.1 1741965 1742678 R Orthologue of ebA5878; Similar to Protein capG_ involved in capsularpolysaccharide (CPS) biosynthesis; hypothetical protein complement(1741965..1742678) Bifidobacterium adolescentis ATCC 15703 4557553 YP_910248.1 CDS BAD_1385 NC_008618.1 1742683 1743723 R Orthologue of BF0187; Similar to Lactobacillus delbrueckiiglycosyltransferase EpsJ; putative glycosyltransferase complement(1742683..1743723) Bifidobacterium adolescentis ATCC 15703 4557478 YP_910249.1 CDS BAD_1386 NC_008618.1 1743720 1745135 R COG family: membrane protein involved in the exportof O-antigen and teichoic acid; Orthologue of BL0230; PFAM_ID: Polysacc_synt; hypothetical protein complement(1743720..1745135) Bifidobacterium adolescentis ATCC 15703 4557479 YP_910250.1 CDS cotSA NC_008618.1 1745140 1746414 R Orthologue of BSU30910; spore coat protein complement(1745140..1746414) Bifidobacterium adolescentis ATCC 15703 4557573 YP_910251.1 CDS BAD_1388 NC_008618.1 1746433 1747578 R Orthologue of SP0353; capsular polysaccharide biosynthesis proteinCps4H complement(1746433..1747578) Bifidobacterium adolescentis ATCC 15703 4557480 YP_910252.1 CDS BAD_1389 NC_008618.1 1747674 1749206 R COG family: sugar transferases involved inlipopolysaccharide synthesis; Orthologue of BL0237; PFAM_ID: Bact_transf; galactosyl transferase CpsD complement(1747674..1749206) Bifidobacterium adolescentis ATCC 15703 4557481 YP_910253.1 CDS BAD_1390 NC_008618.1 1749320 1751293 R Orthologue of BL1084; hypothetical protein complement(1749320..1751293) Bifidobacterium adolescentis ATCC 15703 4557482 YP_910254.1 CDS BAD_1391 NC_008618.1 1751431 1752624 R Orthologue of BL1743; hypothetical protein complement(1751431..1752624) Bifidobacterium adolescentis ATCC 15703 4557483 YP_910255.1 CDS BAD_1392 NC_008618.1 1752779 1754023 R Orthologue of cg0150; regulatory protein complement(1752779..1754023) Bifidobacterium adolescentis ATCC 15703 4557484 YP_910256.1 CDS BAD_1393 NC_008618.1 1754325 1755953 R COG family: permeases of the major facilitatorsuperfamily; Orthologue of BL0251; hypothetical protein complement(1754325..1755953) Bifidobacterium adolescentis ATCC 15703 4557485 YP_910257.1 CDS BAD_1394 NC_008618.1 1756322 1757440 R Orthologue of BURPS1710b_1550; putative 200 kDa antigen p200 complement(1756322..1757440) Bifidobacterium adolescentis ATCC 15703 4556194 YP_910258.1 CDS mntH NC_008618.1 1757636 1758919 R COG family: Mn2+ and Fe2+ transporters of theNramp family; Orthologue of BL0252; PFAM_ID: Nramp; H(+)-stimulated manganese uptake system protein complement(1757636..1758919) Bifidobacterium adolescentis ATCC 15703 4556417 YP_910259.1 CDS BAD_1396 NC_008618.1 1759085 1759939 D COG family: aldo_keto reductases_ related todiketogulonate reductase; Orthologue of BL0255; PFAM_ID: aldo_ket_red; dehydrogenase or reductase protein 1759085..1759939 Bifidobacterium adolescentis ATCC 15703 4556195 YP_910260.1 CDS BAD_1397 NC_008618.1 1759956 1760708 D Orthologue of BL0254; hypothetical protein 1759956..1760708 Bifidobacterium adolescentis ATCC 15703 4556196 YP_910261.1 CDS BAD_1398 NC_008618.1 1761136 1762278 R Orthologue of BL1628; hypothetical protein complement(1761136..1762278) Bifidobacterium adolescentis ATCC 15703 4556197 YP_910262.1 CDS cysN NC_008618.1 1762544 1762951 R Orthologue of NMA1364; sulfate adenylyltransferase subunit 1 complement(1762544..1762951) Bifidobacterium adolescentis ATCC 15703 4556237 YP_910263.1 CDS BAD_1400 NC_008618.1 1763016 1764089 R COG family: transcriptional regulators; Orthologue of BL0258; PFAM_ID:lacI; LacI-type transcriptional regulator complement(1763016..1764089) Bifidobacterium adolescentis ATCC 15703 4556198 YP_910264.1 CDS bgaB NC_008618.1 1764134 1766269 R COG family: beta-galactosidase; Orthologue of BL0259; PFAM_ID: Glyco_hydro_42; lactase; beta-galactosidase I complement(1764134..1766269) Bifidobacterium adolescentis ATCC 15703 4557550 YP_910265.1 CDS BAD_1402 NC_008618.1 1766292 1768547 R Orthologue of BT4160; beta-galactosidase complement(1766292..1768547) Bifidobacterium adolescentis ATCC 15703 4556199 YP_910266.1 CDS BAD_1403 NC_008618.1 1768589 1769422 R Orthologue of OB2568; multiple sugar-binding transport system permease complement(1768589..1769422) Bifidobacterium adolescentis ATCC 15703 4556200 YP_910267.1 CDS malF NC_008618.1 1769419 1770291 R Orthologue of TTE0800; sugar ABC transporter permease complement(1769419..1770291) Bifidobacterium adolescentis ATCC 15703 4556360 YP_910268.1 CDS BAD_1405 NC_008618.1 1770483 1771733 R Orthologue of SMc02873; putative periplasmic binding (signal peptide) ABC transporter protein complement(1770483..1771733) Bifidobacterium adolescentis ATCC 15703 4556201 YP_910269.1 CDS pdxT NC_008618.1 1772311 1773075 R with PdxST is involved in the biosynthesis of pyridoxal 5'-phosphate; PdxT catalyzes the hydrolysis of glutamine to glutamate and ammonia; PdxS utilizes the ammonia to synthesize pyridoxal 5'-phosphate; glutamine amidotransferase subunit PdxT complement(1772311..1773075) Bifidobacterium adolescentis ATCC 15703 4556551 YP_910270.1 CDS pdxS NC_008618.1 1773091 1773966 R with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate; pyridoxal biosynthesis lyase PdxS complement(1773091..1773966) Bifidobacterium adolescentis ATCC 15703 4556550 YP_910271.1 CDS BAD_1408 NC_008618.1 1774390 1778418 R COG family: ABC-type multidrug_protein_lipidtransport system_ ATPase component; Orthologue of BL0264; PFAM_ID: ABC_membrane; PFAM_ID: ABC_tran; ABC transporter ATP-binding protein complement(1774390..1778418) Bifidobacterium adolescentis ATCC 15703 4556202 YP_910272.1 CDS fadD1 NC_008618.1 1779064 1780887 D COG family: long-chain acyl-CoA synthetases(AMP-forming); Orthologue of BL0266; PFAM_ID: AMP-binding; long-chain-fatty acid CoA ligase 1779064..1780887 Bifidobacterium adolescentis ATCC 15703 4556271 YP_910273.1 CDS araA NC_008618.1 1781079 1782593 R catalyzes the formation of L-ribulose from L-arabinose in L-arabinose catabolism; L-arabinose isomerase complement(1781079..1782593) Bifidobacterium adolescentis ATCC 15703 4557387 YP_910274.1 CDS araD NC_008618.1 1782647 1783339 R catalyzes the formation of D-xylulose 5-phosphate from L-ribulose 5-phosphate; L-ribulose-5-phosphate 4-epimerase complement(1782647..1783339) Bifidobacterium adolescentis ATCC 15703 4557388 YP_910275.1 CDS BAD_1412 NC_008618.1 1783383 1785005 R Orthologue of BLi02062_BL0274; sugar kinase complement(1783383..1785005) Bifidobacterium adolescentis ATCC 15703 4556203 YP_910276.1 CDS BAD_1413 NC_008618.1 1785170 1786288 R COG family: transcriptional regulators; Orthologue of BL0275; PFAM_ID:lacI; LacI-type transcriptional regulator complement(1785170..1786288) Bifidobacterium adolescentis ATCC 15703 4556204 YP_910277.1 CDS BAD_1414 NC_008618.1 1786399 1787826 R COG family: nucleotide-binding protein implicatedin inhibition of septum formation; Orthologue of BL1276; PFAM_ID: Maf; PFAM_ID:NUDIX; hypothetical protein complement(1786399..1787826) Bifidobacterium adolescentis ATCC 15703 4556205 YP_910278.1 CDS thrB NC_008618.1 1787823 1788827 R COG family: homoserine kinase; Orthologue of BL1275; PFAM_ID:GHMP_kinases; homoserine kinase complement(1787823..1788827) Bifidobacterium adolescentis ATCC 15703 4557643 YP_910279.1 CDS thrA NC_008618.1 1788999 1790315 R catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase complement(1788999..1790315) Bifidobacterium adolescentis ATCC 15703 4557642 YP_910280.1 CDS lysA NC_008618.1 1790474 1792048 R COG family:diaminopimelate decarboxylase; Orthologue of BL1273; PFAM_ID: Orn_Arg_deC_N; PFAM_ID: Orn_DAP_Arg_deC; diaminopimelate decarboxylase complement(1790474..1792048) Bifidobacterium adolescentis ATCC 15703 4556354 YP_910281.1 CDS argS NC_008618.1 1792082 1793872 R catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase complement(1792082..1793872) Bifidobacterium adolescentis ATCC 15703 4557397 YP_910282.1 CDS BAD_1419 NC_008618.1 1793904 1795490 R COG family: amino acid transporters; Orthologue of BL0758; PFAM_ID:aa_permeases; amino acid permease complement(1793904..1795490) Bifidobacterium adolescentis ATCC 15703 4556206 YP_910283.1 CDS psp1 NC_008618.1 1795698 1796087 R COG family: putative translation initiationinhibitor; Orthologue of BL0348; PFAM_ID: UPF0076; putative translational inhibitor protein complement(1795698..1796087) Bifidobacterium adolescentis ATCC 15703 4556595 YP_910284.1 CDS BAD_1421 NC_008618.1 1796585 1797625 R COG family: thioredoxin domain-containing protein; Orthologue of BL0350; hypothetical protein complement(1796585..1797625) Bifidobacterium adolescentis ATCC 15703 4556207 YP_910285.1 CDS BAD_1422 NC_008618.1 1797686 1798684 R Orthologue of BL0352; hypothetical protein complement(1797686..1798684) Bifidobacterium adolescentis ATCC 15703 4556208 YP_910286.1 CDS BAD_1423 NC_008618.1 1798684 1799745 R Orthologue of BL0353; hypothetical protein complement(1798684..1799745) Bifidobacterium adolescentis ATCC 15703 4556209 YP_910287.1 CDS fkbP1 NC_008618.1 1799895 1800851 D COG family: FkbP-typepeptidyl-prolyl cis-trans isomerases 1; Orthologue of BL0354; PFAM_ID: FKBP; secreted peptidyl-prolyl cis-trans isomerase protein 1799895..1800851 Bifidobacterium adolescentis ATCC 15703 4556970 YP_910288.1 CDS BAD_1425 NC_008618.1 1801061 1801765 R COG family: predicted nuclease of the RecB family; Orthologue of BL0355; PFAM_ID: DUF91; hypothetical protein complement(1801061..1801765) Bifidobacterium adolescentis ATCC 15703 4556210 YP_910289.1 CDS atpC NC_008618.1 1801915 1802193 R produces ATP from ADP in the presence of a proton gradient across the membrane; the epsilon subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit epsilon complement(1801915..1802193) Bifidobacterium adolescentis ATCC 15703 4557697 YP_910290.1 CDS atpD NC_008618.1 1802193 1803677 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta complement(1802193..1803677) Bifidobacterium adolescentis ATCC 15703 4557698 YP_910291.1 CDS atpG NC_008618.1 1803686 1804606 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma complement(1803686..1804606) Bifidobacterium adolescentis ATCC 15703 4557544 YP_910292.1 CDS atpA NC_008618.1 1804610 1806238 R produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha complement(1804610..1806238) Bifidobacterium adolescentis ATCC 15703 4557695 YP_910293.1 CDS atpH NC_008618.1 1806310 1807137 R produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta complement(1806310..1807137) Bifidobacterium adolescentis ATCC 15703 4557545 YP_910294.1 CDS BAD_1431 NC_008618.1 1807167 1807688 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B complement(1807167..1807688) Bifidobacterium adolescentis ATCC 15703 4556211 YP_910295.1 CDS atpE NC_008618.1 1807748 1807975 R COG family: F0F1-typeATP synthase C subunit_archaeal_vacuolar-type H+-ATPasesubunit K; Orthologue of BL0362; PFAM_ID: ATP-synt_C; lipid-binding protein; ATP synthase subunit C complement(1807748..1807975) Bifidobacterium adolescentis ATCC 15703 4557699 YP_910296.1 CDS atpB NC_008618.1 1808032 1808841 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A complement(1808032..1808841) Bifidobacterium adolescentis ATCC 15703 4557696 YP_910297.1 CDS metA NC_008618.1 1809333 1810367 R catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis; homoserine O-succinyltransferase complement(1809333..1810367) Bifidobacterium adolescentis ATCC 15703 4556367 YP_910298.1 CDS BAD_1435 NC_008618.1 1810911 1813169 D COG family: glycosidases; Orthologue of BL0388; PFAM_ID: alpha-amylase; glycanase/glycogenase 1810911..1813169 Bifidobacterium adolescentis ATCC 15703 4556212 YP_910299.1 CDS BAD_1436 NC_008618.1 1813271 1813951 R ATP-binding protein; Identified by match to protein family HMM PF00005; Orthologue of LMOf2365_2627; ABC transporter complement(1813271..1813951) Bifidobacterium adolescentis ATCC 15703 4557661 YP_910300.1 CDS BAD_1437 NC_008618.1 1813975 1814640 R Identified by match to protein family HMM PF06271; Orthologue of PFL_4645_GK1673; hypothetical protein complement(1813975..1814640) Bifidobacterium adolescentis ATCC 15703 4557662 YP_910301.1 CDS BAD_1438 NC_008618.1 1814640 1815332 R Orthologue of Mbar_A2147; cation efflux system protein complement(1814640..1815332) Bifidobacterium adolescentis ATCC 15703 4557663 YP_910302.1 CDS BAD_1439 NC_008618.1 1815322 1816176 R Orthologue of LMOf2365_2630; hypothetical protein complement(1815322..1816176) Bifidobacterium adolescentis ATCC 15703 4557664 YP_910303.1 CDS BAD_1440 NC_008618.1 1816250 1816660 R Identified by similarity to GP:528976; Orthologue of LMOf2365_2631; hypothetical protein complement(1816250..1816660) Bifidobacterium adolescentis ATCC 15703 4557665 YP_910304.1 CDS BAD_1441 NC_008618.1 1816845 1817066 D Orthologue of SE0252; 2-oxoglutarate/malate translocator-like protein 1816845..1817066 Bifidobacterium adolescentis ATCC 15703 4557666 YP_910305.1 CDS BAD_1442 NC_008618.1 1817059 1817715 D Orthologue of STH3220; two-component response regulator 1817059..1817715 Bifidobacterium adolescentis ATCC 15703 4557667 YP_910306.1 CDS BAD_1443 NC_008618.1 1817742 1818929 D Orthologue of CE2341; hypothetical protein 1817742..1818929 Bifidobacterium adolescentis ATCC 15703 4557668 YP_910307.1 CDS ppa NC_008618.1 1819806 1820294 D COGfamily: inorganic pyrophosphatase; Orthologue of BL0389; PFAM_ID:Pyrophosphatase; Pyrophosphate phospho-hydrolase; inorganic pyrophosphatase 1819806..1820294 Bifidobacterium adolescentis ATCC 15703 4556541 YP_910308.1 CDS BAD_1445 NC_008618.1 1820626 1821192 D COG family: predicted membrane protein; Orthologue of BL0390; PFAM_ID:DUF204; hypothetical protein 1820626..1821192 Bifidobacterium adolescentis ATCC 15703 4557669 YP_910309.1 CDS BAD_1446 NC_008618.1 1821301 1822083 R Orthologue of BL0391; hypothetical protein complement(1821301..1822083) Bifidobacterium adolescentis ATCC 15703 4557670 YP_910310.1 CDS BAD_1447 NC_008618.1 1822169 1822927 D COG family: response regulators consisting of aCheY-like receiver domain and a HTH DNA-binding domain; Orthologue of BL0392; PFAM_ID: trans_reg_C; transcriptional regulator 1822169..1822927 Bifidobacterium adolescentis ATCC 15703 4557671 YP_910311.1 CDS nth NC_008618.1 1823137 1823802 D COGfamily: predicted endoIII-related endonuclease; DNA-(apurinic or apyrimidinic site lyase); Orthologue of BL0393; PFAM_ID:HhH-GPD; endonuclease III 1823137..1823802 Bifidobacterium adolescentis ATCC 15703 4556332 YP_910312.1 CDS BAD_1449 NC_008618.1 1823892 1825439 D COG family: ABC-type dipeptide_oligopeptide_nickeltransport systems_ periplasmic components; Orthologue of BL0394; PFAM_ID:SBP_bac_5; ABC transporter substrate-binding protein 1823892..1825439 Bifidobacterium adolescentis ATCC 15703 4557672 YP_910313.1 CDS valS NC_008618.1 1825509 1828283 D valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 1825509..1828283 Bifidobacterium adolescentis ATCC 15703 4556743 YP_910314.1 CDS BAD_1451 NC_008618.1 1828764 1830737 R COG family: methyl-accepting chemotaxis protein; Orthologue of BL0396; hypothetical protein complement(1828764..1830737) Bifidobacterium adolescentis ATCC 15703 4557673 YP_910315.1 CDS BAD_1452 NC_008618.1 1830805 1831218 R catalyzes the interconversion of chorismate to prephenate; chorismate mutase complement(1830805..1831218) Bifidobacterium adolescentis ATCC 15703 4557674 YP_910316.1 CDS BAD_1453 NC_008618.1 1831267 1831743 R COG family: transcriptional regulators; Orthologue of BL0629; PFAM_ID:ASNC_trans_reg; AsnC-type transcriptional regulator complement(1831267..1831743) Bifidobacterium adolescentis ATCC 15703 4557675 YP_910317.1 CDS rho NC_008618.1 1832115 1834127 R An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho complement(1832115..1834127) Bifidobacterium adolescentis ATCC 15703 4556636 YP_910318.1 CDS BAD_1455 NC_008618.1 1834461 1836050 R COG family: protoporphyrinogen oxidase; Orthologue of BL0399; hypothetical protein complement(1834461..1836050) Bifidobacterium adolescentis ATCC 15703 4557676 YP_910319.1 CDS BAD_1456 NC_008618.1 1836531 1837601 R COG family: acetyltransferases_ includingN-acetylases of ribosomal proteins; Orthologue of BL0401; PFAM_ID: Acetyltransf; acetyltransferase complement(1836531..1837601) Bifidobacterium adolescentis ATCC 15703 4557677 YP_910320.1 CDS gatB NC_008618.1 1837871 1839367 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B complement(1837871..1839367) Bifidobacterium adolescentis ATCC 15703 4557247 YP_910321.1 CDS gatA NC_008618.1 1839393 1840928 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A complement(1839393..1840928) Bifidobacterium adolescentis ATCC 15703 4557246 YP_910322.1 CDS gatC NC_008618.1 1840930 1841226 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C complement(1840930..1841226) Bifidobacterium adolescentis ATCC 15703 4557248 YP_910323.1 CDS BAD_1460 NC_008618.1 1841410 1842324 R COG family: rRNA methylases; Orthologue of BL0405; PFAM_ID:SpoU_methylase; hypothetical protein complement(1841410..1842324) Bifidobacterium adolescentis ATCC 15703 4557678 YP_910324.1 CDS BAD_1461 NC_008618.1 1842411 1843082 R COG family: orotate phosphoribosyltransferase; Orthologue of BL0406; hypothetical protein complement(1842411..1843082) Bifidobacterium adolescentis ATCC 15703 4557679 YP_910325.1 CDS BAD_1462 NC_008618.1 1843152 1844486 R COG family: uncharacterized Bcr; Orthologue of BL0407; PFAM_ID: DUF195; hypothetical protein complement(1843152..1844486) Bifidobacterium adolescentis ATCC 15703 4557680 YP_910326.1 CDS silP NC_008618.1 1844630 1845565 D COG family: cation transport ATPases; Orthologue of BL0409; PFAM_ID: E1-E2_ATPase; PFAM_ID: Hydrolase; copper-transporting ATPase 1844630..1845565 Bifidobacterium adolescentis ATCC 15703 4556449 YP_910327.1 CDS clpB NC_008618.1 1845569 1848286 R Orthologue of Rv0384c_BL1250; Probable clpB(alternate gene name: htpM)_ endopeptidase ATP-bindingprotein_ chain B (EC 3.-.-.-); chaperone clpB complement(1845569..1848286) Bifidobacterium adolescentis ATCC 15703 4557567 YP_910328.1 CDS BAD_1465 NC_008618.1 1848589 1849410 R COG family: 2-keto-4-pentenoatehydratase_2- oxohepta-3-ene-1_7-dioic acid hydratase(catechol pathway); Orthologue of BL1247; PFAM_ID: FAA_hydrolase; 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase complement(1848589..1849410) Bifidobacterium adolescentis ATCC 15703 4556079 YP_910329.1 CDS BAD_1466 NC_008618.1 1849506 1850126 R Orthologue of BL0678; hypothetical protein complement(1849506..1850126) Bifidobacterium adolescentis ATCC 15703 4556080 YP_910330.1 CDS BAD_1467 NC_008618.1 1850380 1851978 R Cna protein B-type domain; Orthologue of BL0675; cell surface protein fimafimbrial subunit complement(1850380..1851978) Bifidobacterium adolescentis ATCC 15703 4556081 YP_910331.1 CDS BAD_1468 NC_008618.1 1852141 1853346 R Orthologue of BL1539; hypothetical protein complement(1852141..1853346) Bifidobacterium adolescentis ATCC 15703 4556082 YP_910332.1 CDS clfA NC_008618.1 1853473 1854768 R Orthologue of SAB0744; truncated clumping factor complement(1853473..1854768) Bifidobacterium adolescentis ATCC 15703 4557565 YP_910333.1 CDS BAD_1470 NC_008618.1 1854895 1856184 R COG family: sortase (surface proteintranspeptidase); Orthologue of BL0498; sortase complement(1854895..1856184) Bifidobacterium adolescentis ATCC 15703 4556083 YP_910334.1 CDS BAD_1471 NC_008618.1 1856459 1857277 R COG family: predicted enzyme with a Tim-barrelfold; Orthologue of BL0419; PFAM_ID: UPF0001; hypothetical protein complement(1856459..1857277) Bifidobacterium adolescentis ATCC 15703 4556084 YP_910335.1 CDS BAD_1472 NC_008618.1 1857565 1857984 R Orthologue of ABC3794; transposase complement(1857565..1857984) Bifidobacterium adolescentis ATCC 15703 4556085 YP_910336.1 CDS gluQ NC_008618.1 1858272 1859513 D COG family:glutamyl- and glutaminyl-tRNA synthetases; Glutamate--tRNA ligase; Orthologue of BL1251; PFAM_ID:tRNA-synt_1c; glutamyl-Q tRNA(Asp) synthetase 1858272..1859513 Bifidobacterium adolescentis ATCC 15703 4556164 YP_910337.1 CDS BAD_1474 NC_008618.1 1859609 1860457 R Orthologue of SCO7229; membrane protein complement(1859609..1860457) Bifidobacterium adolescentis ATCC 15703 4556086 YP_910338.1 CDS glpF NC_008618.1 1860687 1861418 R COG family: glycerol uptake facilitator andrelated permeases (major intrinsic protein family); Orthologue of BL0410; PFAM_ID: MIP; glycerol uptake facilitator protein complement(1860687..1861418) Bifidobacterium adolescentis ATCC 15703 4557718 YP_910339.1 CDS BAD_1476 NC_008618.1 1862142 1862531 R hypothetical protein complement(1862142..1862531) Bifidobacterium adolescentis ATCC 15703 4556087 YP_910340.1 CDS BAD_1477 NC_008618.1 1862601 1863974 R Identified by Glimmer2; putative; Identified by match to protein family HMM PF03372; Orthologue of BURPS1710b_2927_BURPS1710b_A0408; hypothetical protein complement(1862601..1863974) Bifidobacterium adolescentis ATCC 15703 4556088 YP_910341.1 CDS BAD_1478 NC_008618.1 1864032 1864436 R Orthologue of BL0417; hypothetical protein complement(1864032..1864436) Bifidobacterium adolescentis ATCC 15703 4556089 YP_910342.1 CDS BAD_1479 NC_008618.1 1864734 1865090 R Orthologue of RB950; amino acid transporter complement(1864734..1865090) Bifidobacterium adolescentis ATCC 15703 4556090 YP_910343.1 CDS rplI NC_008618.1 1865300 1865746 R in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 complement(1865300..1865746) Bifidobacterium adolescentis ATCC 15703 4556676 YP_910344.1 CDS rpsR NC_008618.1 1865766 1866014 R binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 complement(1865766..1866014) Bifidobacterium adolescentis ATCC 15703 4557608 YP_910345.1 CDS ssb NC_008618.1 1866101 1866760 R binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; single-stranded DNA-binding protein complement(1866101..1866760) Bifidobacterium adolescentis ATCC 15703 4556454 YP_910346.1 CDS rpsF NC_008618.1 1866803 1867093 R binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 complement(1866803..1867093) Bifidobacterium adolescentis ATCC 15703 4556652 YP_910347.1 CDS prsA1 NC_008618.1 1867371 1868384 R catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase complement(1867371..1868384) Bifidobacterium adolescentis ATCC 15703 4556593 YP_910348.1 CDS rbsK NC_008618.1 1868588 1869580 R COG family: sugar kinases_ ribokinase family; Orthologue of BL1772; PFAM_ID: pfkB; PfkB family sugar kinase complement(1868588..1869580) Bifidobacterium adolescentis ATCC 15703 4556618 YP_910349.1 CDS iunH2 NC_008618.1 1869654 1870742 R Orthologue of cg2168; putative nucleoside hydrolase protein complement(1869654..1870742) Bifidobacterium adolescentis ATCC 15703 4556228 YP_910350.1 CDS rbsR NC_008618.1 1870890 1871942 R Orthologue of BTH_I2472; ribose operon repressor RbsR complement(1870890..1871942) Bifidobacterium adolescentis ATCC 15703 4556621 YP_910351.1 CDS BAD_1488 NC_008618.1 1872239 1872496 R hypothetical protein complement(1872239..1872496) Bifidobacterium adolescentis ATCC 15703 4556091 YP_910352.1 CDS BAD_1489 NC_008618.1 1872493 1872840 R Orthologue of FN1382; ATPase complement(1872493..1872840) Bifidobacterium adolescentis ATCC 15703 4556092 YP_910353.1 CDS BAD_1490 NC_008618.1 1872927 1873190 R Orthologue of RS05312; transcription regulator protein complement(1872927..1873190) Bifidobacterium adolescentis ATCC 15703 4556093 YP_910354.1 CDS BAD_1491 NC_008618.1 1873227 1875305 R COG family: permeases of the major facilitatorsuperfamily; Orthologue of BL0920; PFAM_ID: sugar_tr; PFAM_ID:CBS; efflux transporter protein complement(1873227..1875305) Bifidobacterium adolescentis ATCC 15703 4556094 YP_910355.1 CDS BAD_1492 NC_008618.1 1875420 1875605 D COG family: S-adenosylmethionine synthetase; Orthologue of BL0921; hypothetical protein 1875420..1875605 Bifidobacterium adolescentis ATCC 15703 4556095 YP_910356.1 CDS BAD_1493 NC_008618.1 1875816 1876343 D Orthologue of BL0922; hypothetical protein 1875816..1876343 Bifidobacterium adolescentis ATCC 15703 4556096 YP_910357.1 CDS accD3 NC_008618.1 1876379 1876768 D Orthologue of SAV5722; putative acetyl CoA carboxylase subunit beta 1876379..1876768 Bifidobacterium adolescentis ATCC 15703 4557056 YP_910358.1 CDS rmlB1 NC_008618.1 1876884 1877906 R COG family: dTDP-D-glucose 4_6-dehydratase; Orthologue of BL0229; PFAM_ID: 3Beta_HSD; PFAM_ID: Epimerase; rhamnose biosynthesis dTDP-glucose 4,6-dehydratase complement(1876884..1877906) Bifidobacterium adolescentis ATCC 15703 4556661 YP_910359.1 CDS BAD_1496 NC_008618.1 1878026 1879228 R Orthologue of nfa2110; hypothetical protein complement(1878026..1879228) Bifidobacterium adolescentis ATCC 15703 4556097 YP_910360.1 CDS BAD_1497 NC_008618.1 1880171 1882027 D COG family: phosphoglycerol transferase and relatedproteins_ alkaline phosphatase superfamily; Orthologue of BL0203; hypothetical protein 1880171..1882027 Bifidobacterium adolescentis ATCC 15703 4556803 YP_910361.1 CDS BAD_1498 NC_008618.1 1882093 1883136 D Orthologue of BF0187; Similar to Lactobacillus delbrueckiiglycosyltransferase EpsJ; hypothetical protein 1882093..1883136 Bifidobacterium adolescentis ATCC 15703 4556804 YP_910362.1 CDS BAD_1499 NC_008618.1 1883253 1884596 D Identified by match to protein family HMM PF00535; Orthologue of TDE1433; glycosyl transferase family protein 1883253..1884596 Bifidobacterium adolescentis ATCC 15703 4556805 YP_910363.1 CDS rgpDc NC_008618.1 1884692 1885918 R COG family: ABC-type polysaccharide_polyolphosphate transport system_ ATPase component; Orthologue of BL0207; PFAM_ID:ABC_tran; ATP-driven polysaccharide export protein complement(1884692..1885918) Bifidobacterium adolescentis ATCC 15703 4556635 YP_910364.1 CDS BAD_1501 NC_008618.1 1885940 1886776 R COG family: membrane permeases involved in cellwall biosynthesis; Orthologue of BL0208; PFAM_ID: ABC2_membrane; polysaccharide ABC transporter permease complement(1885940..1886776) Bifidobacterium adolescentis ATCC 15703 4556806 YP_910365.1 CDS BAD_1502 NC_008618.1 1886910 1888853 D Orthologue of mlr7560; hypothetical protein 1886910..1888853 Bifidobacterium adolescentis ATCC 15703 4556807 YP_910366.1 CDS BAD_1503 NC_008618.1 1888850 1889917 D Orthologue of Mbar_A2235; hypothetical protein 1888850..1889917 Bifidobacterium adolescentis ATCC 15703 4556808 YP_910367.1 CDS BAD_1504 NC_008618.1 1890272 1891708 R Orthologue of LMOf2365_2740; hypothetical protein complement(1890272..1891708) Bifidobacterium adolescentis ATCC 15703 4556809 YP_910368.1 CDS BAD_1505 NC_008618.1 1891782 1892735 R COG family: glycosyltransferases involved in cellwall biogenesis; Orthologue of BL0205; PFAM_ID: Glycos_transf_2; glycosyltransferase complement(1891782..1892735) Bifidobacterium adolescentis ATCC 15703 4556810 YP_910369.1 CDS BAD_1506 NC_008618.1 1892764 1893615 R Orthologue of Pcar_1128; nucleoside-diphosphate-sugar epimerase family protein complement(1892764..1893615) Bifidobacterium adolescentis ATCC 15703 4556811 YP_910370.1 CDS rmlB1 NC_008618.1 1893710 1894732 D COG family: dTDP-D-glucose 4_6-dehydratase; Orthologue of BL0229; PFAM_ID: 3Beta_HSD; PFAM_ID: Epimerase; rhamnose biosynthesis dTDP-glucose 4,6-dehydratase 1893710..1894732 Bifidobacterium adolescentis ATCC 15703 4556662 YP_910371.1 CDS rmlCD NC_008618.1 1894737 1896167 D COG family: dTDP-4-dehydrorhamnose 3_5-epimeraseand related enzymes; Orthologue of BL0228_cg0402; PFAM_ID: dTDP_sugar_isom; PFAM_ID:Epimerase; fused dTDP-4-keto-L-rhamnose reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase 1894737..1896167 Bifidobacterium adolescentis ATCC 15703 4556663 YP_910372.1 CDS BAD_1509 NC_008618.1 1896164 1897066 D hypothetical protein 1896164..1897066 Bifidobacterium adolescentis ATCC 15703 4556812 YP_910373.1 CDS BAD_1510 NC_008618.1 1897154 1898296 R proline symporter complement(1897154..1898296) Bifidobacterium adolescentis ATCC 15703 4556813 YP_910374.1 CDS lytC NC_008618.1 1898311 1900002 R Orthologue of spr1431; 1,4-beta-N-acetylmuramidase complement(1898311..1900002) Bifidobacterium adolescentis ATCC 15703 4556358 YP_910375.1 CDS BAD_1512 NC_008618.1 1900263 1900925 D Orthologue of SAS2540; Similar to internal region of Streptococcusgordonii platelet binding protein GspB; putative cell wall-anchored protein 1900263..1900925 Bifidobacterium adolescentis ATCC 15703 4556814 YP_910376.1 CDS BAD_1513 NC_008618.1 1900922 1902577 D Orthologue of BT3124; Similar to human sialic acid-specificacetylesterase II; putative sialic acid-specific acetylesterase 1900922..1902577 Bifidobacterium adolescentis ATCC 15703 4556815 YP_910377.1 CDS BAD_1514 NC_008618.1 1902719 1903762 D Orthologue of mlr0587; hypothetical protein 1902719..1903762 Bifidobacterium adolescentis ATCC 15703 4556816 YP_910378.1 CDS BAD_1515 NC_008618.1 1904028 1904516 D Orthologue of MAP2018c; hypothetical protein 1904028..1904516 Bifidobacterium adolescentis ATCC 15703 4556817 YP_910379.1 CDS BAD_1516 NC_008618.1 1905330 1905941 D Orthologue of LSA1873; hypothetical protein 1905330..1905941 Bifidobacterium adolescentis ATCC 15703 4556818 YP_910380.1 CDS BAD_1517 NC_008618.1 1911900 1914197 R Orthologue of Rv3779; Probableconserved transmembrane ala-_ leu-rich protein; transmembrane protein alanine and leucine rich complement(1911900..1914197) Bifidobacterium adolescentis ATCC 15703 4556819 YP_910381.1 CDS BAD_1518 NC_008618.1 1914504 1915904 D COG family: ABC-type transport systems_ involved inlipoprotein release_ permease components; ABC transporter permease 1914504..1915904 Bifidobacterium adolescentis ATCC 15703 4556820 YP_910382.1 CDS BAD_1519 NC_008618.1 1915901 1916944 D COG family: ABC-type sugar (aldose) transportsystem_ ATPase component; COG family: ABC-type transport systems_ involved inlipoprotein release_ permease components; Orthologue of BL0197; PFAM_ID: ABC_tran; ABC transporter ATP-binding protein 1915901..1916944 Bifidobacterium adolescentis ATCC 15703 4556821 YP_910383.1 CDS BAD_1520 NC_008618.1 1917494 1918324 R COG family: predicted HD superfamily hydrolase; Orthologue of BL0196; hypothetical protein complement(1917494..1918324) Bifidobacterium adolescentis ATCC 15703 4556822 YP_910384.1 CDS BAD_1521 NC_008618.1 1918563 1919432 R COG family: predicted glutamine amidotransferase; Orthologue of BL0195; hypothetical protein complement(1918563..1919432) Bifidobacterium adolescentis ATCC 15703 4556920 YP_910385.1 CDS kup2 NC_008618.1 1919807 1921987 R COG family: K+ transporter; Orthologue of BL0194; PFAM_ID: K_trans; potassium transport system protein kup 2 complement(1919807..1921987) Bifidobacterium adolescentis ATCC 15703 4556272 YP_910386.1 CDS BAD_1523 NC_008618.1 1922232 1923197 R COG family: Mg-dependent DNase; Orthologue of BL0193; PFAM_ID:TatD_DNase; hypothetical protein complement(1922232..1923197) Bifidobacterium adolescentis ATCC 15703 4556921 YP_910387.1 CDS BAD_1524 NC_008618.1 1923281 1925629 R COG family: alpha-L-arabinofuranosidase; Orthologue of BL0181; alpha-arabinofuranosidase I complement(1923281..1925629) Bifidobacterium adolescentis ATCC 15703 4556922 YP_910388.1 CDS BAD_1525 NC_008618.1 1925743 1927215 R Orthologue of BL0177; alpha-galactosidase complement(1925743..1927215) Bifidobacterium adolescentis ATCC 15703 4556923 YP_910389.1 CDS BAD_1526 NC_008618.1 1927436 1928506 D COG family: transcriptional regulators; Orthologue of BL0176; PFAM_ID: Peripla_BP_like; PFAM_ID:lacI; LacI-type transcriptional regulator 1927436..1928506 Bifidobacterium adolescentis ATCC 15703 4556924 YP_910390.1 CDS xynD NC_008618.1 1928630 1929667 D Orthologue of SAV6381; endo-1,4-beta-xylanase 1928630..1929667 Bifidobacterium adolescentis ATCC 15703 4556765 YP_910391.1 CDS BAD_1528 NC_008618.1 1929698 1932109 R Orthologue of PPA2057; alpha-galactosidase complement(1929698..1932109) Bifidobacterium adolescentis ATCC 15703 4556925 YP_910392.1 CDS BAD_1529 NC_008618.1 1932292 1934457 R COG family: uncharacterized Bcr; Orthologue of BL0174; hypothetical protein complement(1932292..1934457) Bifidobacterium adolescentis ATCC 15703 4556926 YP_910393.1 CDS BAD_1530 NC_008618.1 1934691 1936478 R ATP-binding protein; Orthologue of BL0180_lin0155; ABC transporter complement(1934691..1936478) Bifidobacterium adolescentis ATCC 15703 4556927 YP_910394.1 CDS BAD_1531 NC_008618.1 1936493 1938385 R COG family: ABC-type multidrug_protein_lipidtransport system_ ATPase component; Orthologue of BL0179; PFAM_ID: ABC_membrane; PFAM_ID: ABC_tran; ABC transporter permease complement(1936493..1938385) Bifidobacterium adolescentis ATCC 15703 4556928 YP_910395.1 CDS lipA NC_008618.1 1938589 1939890 D COG0657 Esterase-lipase; Orthologue of LBA1355; lipase 1938589..1939890 Bifidobacterium adolescentis ATCC 15703 4556349 YP_910396.1 CDS glcP NC_008618.1 1939964 1941466 R Orthologue of BL1631; D-glucose-proton symporter complement(1939964..1941466) Bifidobacterium adolescentis ATCC 15703 4557705 YP_910397.1 CDS BAD_1534 NC_008618.1 1942140 1944506 R Identified by match to protein family HMM PF00703;match to protein family HMM PF02837; Orthologue of TDE1730; glycosyl hydrolase complement(1942140..1944506) Bifidobacterium adolescentis ATCC 15703 4556929 YP_910398.1 CDS BAD_1535 NC_008618.1 1944842 1946704 R methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase complement(1944842..1946704) Bifidobacterium adolescentis ATCC 15703 4556930 YP_910399.1 CDS BAD_1536 NC_008618.1 1946782 1947486 D Orthologue of BL0168; hypothetical protein 1946782..1947486 Bifidobacterium adolescentis ATCC 15703 4556931 YP_910400.1 CDS BAD_1537 NC_008618.1 1947483 1947983 D Orthologue of BL0167; hypothetical protein 1947483..1947983 Bifidobacterium adolescentis ATCC 15703 4556932 YP_910401.1 CDS BAD_1538 NC_008618.1 1947953 1949032 R COG family: predicted methyltransferases; Orthologue of BL0166; PFAM_ID:TP_methylase; hypothetical protein complement(1947953..1949032) Bifidobacterium adolescentis ATCC 15703 4556933 YP_910402.1 CDS BAD_1539 NC_008618.1 1949260 1950264 R Identified by Glimmer2; putative; Orthologue of BURPS1710b_2087; hypothetical protein complement(1949260..1950264) Bifidobacterium adolescentis ATCC 15703 4556934 YP_910403.1 CDS BAD_1540 NC_008618.1 1950317 1951366 R Orthologue of Bcep18194_B0045; hypothetical protein complement(1950317..1951366) Bifidobacterium adolescentis ATCC 15703 4556935 YP_910404.1 CDS BAD_1541 NC_008618.1 1951787 1952455 R COG family: predicted phosphatase_phosphohexomutase; Orthologue of BL0511; PFAM_ID: Hydrolase; hypothetical protein complement(1951787..1952455) Bifidobacterium adolescentis ATCC 15703 4556936 YP_910405.1 CDS BAD_1542 NC_008618.1 1952699 1952848 D Orthologue of PG1691; hypothetical protein 1952699..1952848 Bifidobacterium adolescentis ATCC 15703 4556937 YP_910406.1 CDS BAD_1543 NC_008618.1 1952845 1953210 R Orthologue of SAV283; hypothetical protein complement(1952845..1953210) Bifidobacterium adolescentis ATCC 15703 4556938 YP_910407.1 CDS BAD_1544 NC_008618.1 1953438 1954046 R COG family: predicted transcriptional regulators; Orthologue of BL0516; PFAM_ID: merR; MerR family transcriptional regulator complement(1953438..1954046) Bifidobacterium adolescentis ATCC 15703 4556939 YP_910408.1 CDS BAD_1545 NC_008618.1 1954052 1955077 R COG family: molecular chaperones (containC-terminal Zn finger domain); Orthologue of BL0517; PFAM_ID: DnaJ; PFAM_ID:DnaJ_C; chaperone protein DnaJ complement(1954052..1955077) Bifidobacterium adolescentis ATCC 15703 4556940 YP_910409.1 CDS grpE NC_008618.1 1955252 1955920 R with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE complement(1955252..1955920) Bifidobacterium adolescentis ATCC 15703 4556141 YP_910410.1 CDS dnaK NC_008618.1 1955923 1957803 R heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK complement(1955923..1957803) Bifidobacterium adolescentis ATCC 15703 4556255 YP_910411.1 CDS BAD_1548 NC_008618.1 1958069 1960168 R Orthologue of ECs0433; alkaline phosphatase complement(1958069..1960168) Bifidobacterium adolescentis ATCC 15703 4556941 YP_910412.1 CDS BAD_1549 NC_008618.1 1960654 1961532 R COG family: predicted permeases; Orthologue of BL1515; PFAM_ID: DUF81; hypothetical protein complement(1960654..1961532) Bifidobacterium adolescentis ATCC 15703 4556942 YP_910413.1 CDS BAD_1550 NC_008618.1 1961699 1962211 D Orthologue of nfa13410; hypothetical protein 1961699..1962211 Bifidobacterium adolescentis ATCC 15703 4556943 YP_910414.1 CDS BAD_1551 NC_008618.1 1962450 1963313 R Identified by similarity to GB:AAC13546.1; match toprotein family HMM PF04203; match to protein family HMMTIGR01076; Orthologue of SAK_1439; sortase family protein complement(1962450..1963313) Bifidobacterium adolescentis ATCC 15703 4556944 YP_910415.1 CDS can NC_008618.1 1963444 1964517 R Orthologue of SAS2578; collagen adhesin complement(1963444..1964517) Bifidobacterium adolescentis ATCC 15703 4557552 YP_910416.1 CDS BAD_1553 NC_008618.1 1965054 1965371 D Identified by match to protein family HMM PF00990;match to protein family HMM TIGR00254; Orthologue of PFL_0087; putative diguanylate cyclase 1965054..1965371 Bifidobacterium adolescentis ATCC 15703 4556945 YP_910417.1 CDS BAD_1554 NC_008618.1 1965489 1965686 D Orthologue of BF3410; hypothetical protein 1965489..1965686 Bifidobacterium adolescentis ATCC 15703 4556946 YP_910418.1 CDS BAD_1555 NC_008618.1 1965641 1966072 R Orthologue of alr9029; putative death on curing protein complement(1965641..1966072) Bifidobacterium adolescentis ATCC 15703 4556947 YP_910419.1 CDS BAD_1556 NC_008618.1 1966753 1967781 R COG family: transcriptional regulators; Orthologue of BL0142; PFAM_ID: Peripla_BP_like; PFAM_ID:lacI; LacI-type transcriptional regulator complement(1966753..1967781) Bifidobacterium adolescentis ATCC 15703 4556948 YP_910420.1 CDS BAD_1557 NC_008618.1 1967902 1968750 R No significant database matches; Orthologue of DIP0537; putative ABC transport system membrane protein complement(1967902..1968750) Bifidobacterium adolescentis ATCC 15703 4556949 YP_910421.1 CDS BAD_1558 NC_008618.1 1968880 1969662 R Orthologue of Nmul_A1707; haloacid dehalogenase-like hydrolase complement(1968880..1969662) Bifidobacterium adolescentis ATCC 15703 4556950 YP_910422.1 CDS pulA NC_008618.1 1969760 1971457 R Orthologue of BT4689_BT9727_2498; pullulanase complement(1969760..1971457) Bifidobacterium adolescentis ATCC 15703 4556690 YP_910423.1 CDS malQ NC_008618.1 1971927 1974095 D Amylomaltase; COG family:4-alpha-glucanotransferase; Orthologue of BL0527; PFAM_ID: 4A_glucanotrans; 4-alpha-glucanotransferase 1971927..1974095 Bifidobacterium adolescentis ATCC 15703 4556362 YP_910424.1 CDS aglA NC_008618.1 1974258 1976006 R COG family: glycosidases; Orthologue of BL0529; PFAM_ID:alpha-amylase; alpha-1,4-glucosidase complement(1974258..1976006) Bifidobacterium adolescentis ATCC 15703 4557201 YP_910425.1 CDS BAD_1562 NC_008618.1 1976220 1976822 D COG family: 4-hydroxybenzoate polyprenyltransferaseand related prenyltransferases; Orthologue of BL0145; hypothetical protein 1976220..1976822 Bifidobacterium adolescentis ATCC 15703 4556951 YP_910426.1 CDS BAD_1563 NC_008618.1 1977022 1977864 R COG family: sugar permeases; Orthologue of BL0144; PFAM_ID: BPD_transp; ABC transporter permease complement(1977022..1977864) Bifidobacterium adolescentis ATCC 15703 4556952 YP_910427.1 CDS BAD_1564 NC_008618.1 1977861 1978778 R COG family: ABC-type sugar transport systems_permease components; Orthologue of BL0143; PFAM_ID: BPD_transp; ABC transporter permease complement(1977861..1978778) Bifidobacterium adolescentis ATCC 15703 4556953 YP_910428.1 CDS BAD_1565 NC_008618.1 1979080 1980093 D COG family: transcriptional regulators; Orthologue of BL0142; PFAM_ID: Peripla_BP_like; PFAM_ID:lacI; LacI-type transcriptional regulator 1979080..1980093 Bifidobacterium adolescentis ATCC 15703 4556954 YP_910429.1 CDS BAD_1566 NC_008618.1 1980267 1981667 R Orthologue of BL0141; ABC transporter substrate-binding protein complement(1980267..1981667) Bifidobacterium adolescentis ATCC 15703 4556955 YP_910430.1 CDS BAD_1567 NC_008618.1 1981925 1982629 R COG family: phosphoglyceratemutase_fructose-2_6- bisphosphatase; Orthologue of BL0140; PFAM_ID: PGAM; hypothetical protein complement(1981925..1982629) Bifidobacterium adolescentis ATCC 15703 4556956 YP_910431.1 CDS BAD_1568 NC_008618.1 1983213 1983992 D COG family: nitroreductase; Flavin reductase P; NADPH-Fmn oxidoreductase; Orthologue of BL0139; PFAM_ID:Nitroreductase; NADPH-flavin oxidoreductase 1983213..1983992 Bifidobacterium adolescentis ATCC 15703 4556957 YP_910432.1 CDS BAD_1569 NC_008618.1 1990545 1991201 D COG family: NAD-dependent protein deacetylases_Sir2 family; Orthologue of BL1528; PFAM_ID: SIR2; Sir2-type regulatory protein 1990545..1991201 Bifidobacterium adolescentis ATCC 15703 4556958 YP_910433.1 CDS tdcB NC_008618.1 1991302 1992567 R catalyzes the formation of 2-oxobutanoate from L-threonine; threonine dehydratase complement(1991302..1992567) Bifidobacterium adolescentis ATCC 15703 4556461 YP_910434.1 CDS agl NC_008618.1 1992747 1994567 R COG family:glycosidases; Dextrin 6-alpha-D-glucanohydrolase; Orthologue of BL1526; PFAM_ID: alpha-amylase; Sucrase-isomaltase; oligo-1,6-glucosidase complement(1992747..1994567) Bifidobacterium adolescentis ATCC 15703 4557198 YP_910435.1 CDS msmG NC_008618.1 1994885 1995775 R COG family: sugar permeases; Orthologue of BL1523; PFAM_ID:BPD_transp; sugar ABC transporter permease complement(1994885..1995775) Bifidobacterium adolescentis ATCC 15703 4556370 YP_910436.1 CDS msmF NC_008618.1 1995794 1996726 R COG family: ABC-type sugar transport systems_permease components; Orthologue of BL1522; PFAM_ID: BPD_transp; sugar ABC transporter permease complement(1995794..1996726) Bifidobacterium adolescentis ATCC 15703 4556369 YP_910437.1 CDS msmE NC_008618.1 1996741 1998033 R COG family: sugar-binding periplasmicproteins_domains; Orthologue of BL1521; PFAM_ID: SBP_bacterial_1; sugar binding protein of ABC transporter system complement(1996741..1998033) Bifidobacterium adolescentis ATCC 15703 4556426 YP_910438.1 CDS BAD_1575 NC_008618.1 1998219 1999445 D COG family: transcriptional regulators; Orthologue of BL1520; PFAM_ID:ROK; NagC/XylR-type transcriptional regulator 1998219..1999445 Bifidobacterium adolescentis ATCC 15703 4557018 YP_910439.1 CDS aga NC_008618.1 1999518 2001812 R COG family: alpha-galactosidase; Orthologue of BL1518; melibiase; alpha-galactosidase complement(1999518..2001812) Bifidobacterium adolescentis ATCC 15703 4557197 YP_910440.1 CDS mesJ NC_008618.1 2001918 2002391 R COG family: cytosine_adenosine deaminases; Orthologue of BL1517; PFAM_ID: dCMP_cyt_deam; cytidine and deoxycytidylate deaminase complement(2001918..2002391) Bifidobacterium adolescentis ATCC 15703 4556366 YP_910441.1 CDS BAD_1578 NC_008618.1 2002511 2004631 D COG family: NhaP-type Na+_H+ and K+_H+ antiporters; Hydrogen exchanger family protein [Listeria monocytogenes str. 4b F2365]; Orthologue of BL1516; PFAM_ID: Na_H_Exchanger; NhaP-type Na(+)/H(+) exchanger 2002511..2004631 Bifidobacterium adolescentis ATCC 15703 4557019 YP_910442.1 CDS BAD_1579 NC_008618.1 2005062 2005841 D COG family: predicted esterase; Orthologue of BL1514; PFAM_ID:abhydrolase_2; phospholipase/carboxylesterase 2005062..2005841 Bifidobacterium adolescentis ATCC 15703 4557020 YP_910443.1 CDS dcd NC_008618.1 2005876 2006457 R Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase complement(2005876..2006457) Bifidobacterium adolescentis ATCC 15703 4556244 YP_910444.1 CDS BAD_1581 NC_008618.1 2006567 2009641 R Orthologue of ABC2324; calcium-transporting ATPase complement(2006567..2009641) Bifidobacterium adolescentis ATCC 15703 4557021 YP_910445.1 CDS BAD_1582 NC_008618.1 2009997 2013146 D Orthologue of BH2723; beta-galactosidase 2009997..2013146 Bifidobacterium adolescentis ATCC 15703 4557022 YP_910446.1 CDS BAD_1583 NC_008618.1 2013325 2014182 D COG family: uncharacterized Bcr; Orthologue of BL1731; hypothetical protein 2013325..2014182 Bifidobacterium adolescentis ATCC 15703 4557023 YP_910447.1 CDS BAD_1584 NC_008618.1 2014343 2015374 D Orthologue of SAV2569; LacI family transcriptional regulator 2014343..2015374 Bifidobacterium adolescentis ATCC 15703 4557024 YP_910448.1 CDS BAD_1585 NC_008618.1 2015629 2016936 D Orthologue of SAV1028; PF00497: Bacterial extracellular solute-bindingproteins_ family 3; putative solute-binding lipoprotein 2015629..2016936 Bifidobacterium adolescentis ATCC 15703 4557025 YP_910449.1 CDS BAD_1586 NC_008618.1 2017117 2018052 D sugar; Identified by sequence similarity; Orthologue of Atu2506; ABC transporter permease 2017117..2018052 Bifidobacterium adolescentis ATCC 15703 4557026 YP_910450.1 CDS malG4 NC_008618.1 2018114 2018992 D Orthologue of TTE1936; sugar permeases 2018114..2018992 Bifidobacterium adolescentis ATCC 15703 4556361 YP_910451.1 CDS BAD_1588 NC_008618.1 2019179 2020309 D Orthologue of SMb20234; Product confidence : hypothetical Gene name confidence : hypothetical; hypothetical protein 2019179..2020309 Bifidobacterium adolescentis ATCC 15703 4557027 YP_910452.1 CDS BAD_1589 NC_008618.1 2020415 2020954 R LuxR; Orthologue of Reut_B3832; regulatory protein complement(2020415..2020954) Bifidobacterium adolescentis ATCC 15703 4557028 YP_910453.1 CDS BAD_1590 NC_008618.1 2021152 2022438 R COG family: permeases of the major facilitatorsuperfamily; Orthologue of BL0681; PFAM_ID: sugar_tr; putative transport protein complement(2021152..2022438) Bifidobacterium adolescentis ATCC 15703 4557029 YP_910454.1 CDS BAD_1591 NC_008618.1 2022511 2023500 D Identified by sequence similarity; Orthologue of Lxx18230; tRNA/rRNA methyltransferase protein 2022511..2023500 Bifidobacterium adolescentis ATCC 15703 4557030 YP_910455.1 CDS BAD_1592 NC_008618.1 2023624 2025036 R Orthologue of BL0679; hypothetical protein complement(2023624..2025036) Bifidobacterium adolescentis ATCC 15703 4557031 YP_910456.1 CDS msiK NC_008618.1 2025283 2026410 R COG family: ABC- typesugar_spermidine_putrescine_iron_thiamine transportsystems_ ATPase component; Orthologue of BL0673; PFAM_ID: ABC_tran; sugars ABC transporter ATP-binding protein complement(2025283..2026410) Bifidobacterium adolescentis ATCC 15703 4556425 YP_910457.1 CDS virR NC_008618.1 2026701 2027456 D Orthologue of CPE1501; Similar to pir:S60139 virR protein from Clostridiumperfringens; two-component response regulator 2026701..2027456 Bifidobacterium adolescentis ATCC 15703 4556749 YP_910458.1 CDS virS NC_008618.1 2027453 2028793 D Orthologue of CPE1500; Similar to pir:C55521 virS protein from Clostridiumperfringens 5 putative transmembrane regions were found by PSORT.; two-component sensor histidine kinase 2027453..2028793 Bifidobacterium adolescentis ATCC 15703 4556750 YP_910459.1 CDS BAD_1596 NC_008618.1 2028819 2030129 R COG family: chloride channel protein EriC; Orthologue of BL0946; PFAM_ID:voltage_CLC; hypothetical protein complement(2028819..2030129) Bifidobacterium adolescentis ATCC 15703 4557032 YP_910460.1 CDS BAD_1597 NC_008618.1 2031016 2031591 R Orthologue of STH952; PTS system cellobiose-specific transporter subunit IIC complement(2031016..2031591) Bifidobacterium adolescentis ATCC 15703 4557033 YP_910461.1 CDS BAD_1598 NC_008618.1 2031584 2034019 R Orthologue of nfa34000; putative glycosyl hydrolase complement(2031584..2034019) Bifidobacterium adolescentis ATCC 15703 4557034 YP_910462.1 CDS xylS NC_008618.1 2034772 2037297 D Orthologue of spr0284; alpha-xylosidase 2034772..2037297 Bifidobacterium adolescentis ATCC 15703 4556762 YP_910463.1 CDS BAD_1600 NC_008618.1 2037786 2038220 D Orthologue of BH3445; transposase 2037786..2038220 Bifidobacterium adolescentis ATCC 15703 4557035 YP_910464.1 CDS BAD_1601 NC_008618.1 2038323 2038742 D Identified by match to protein family HMM PF03372; Orthologue of BURPS1710b_A0408; putative endonuclease/exonuclease/phosphatase family protein 2038323..2038742 Bifidobacterium adolescentis ATCC 15703 4557036 YP_910465.1 CDS nagA NC_008618.1 2038826 2040073 D COG family:N-acetylglucosamine-6-phosphate deacetylase; GlcNAc 6-P deacetylase; Orthologue of BL1344; PFAM_ID:NagA; N-acetylglucosamine-6-phosphate deacetylase 2038826..2040073 Bifidobacterium adolescentis ATCC 15703 4556385 YP_910466.1 CDS BAD_1603 NC_008618.1 2040109 2042187 D Orthologue of SCO7407; Probable beta-galactosidase(EC 3.2.1.23); beta-galactosidase 2040109..2042187 Bifidobacterium adolescentis ATCC 15703 4557037 YP_910467.1 CDS lacS NC_008618.1 2044437 2045963 R COG family: Na+_melibiose symporter andrelated transporters; Orthologue of BL0976; galactoside symporter complement(2044437..2045963) Bifidobacterium adolescentis ATCC 15703 4556274 YP_910468.1 CDS BAD_1605 NC_008618.1 2046289 2049360 D Orthologue of BH2723; beta-galactosidase 2046289..2049360 Bifidobacterium adolescentis ATCC 15703 4557038 YP_910469.1 CDS BAD_1606 NC_008618.1 2049655 2050674 R COG family: transcriptional regulators; Orthologue of BL1774; PFAM_ID:lacI; LacI-type transcriptional regulator complement(2049655..2050674) Bifidobacterium adolescentis ATCC 15703 4557039 YP_910470.1 CDS BAD_1607 NC_008618.1 2050756 2051250 D AraC family; Identified by match to protein family HMM PF00165;match to protein family HMM PF02311; Orthologue of SAK_1191; transcriptional regulator 2050756..2051250 Bifidobacterium adolescentis ATCC 15703 4557040 YP_910471.1 CDS BAD_1608 NC_008618.1 2051275 2051709 D Identified by match to protein family HMM PF00583; Orthologue of TDE0035; acetyltransferase 2051275..2051709 Bifidobacterium adolescentis ATCC 15703 4557041 YP_910472.1 CDS BAD_1609 NC_008618.1 2052315 2053574 R Orthologue of SSP0040; hypothetical protein complement(2052315..2053574) Bifidobacterium adolescentis ATCC 15703 4557042 YP_910473.1 CDS BAD_1610 NC_008618.1 2054437 2056887 R Orthologue of TM0025; beta-glucosidase complement(2054437..2056887) Bifidobacterium adolescentis ATCC 15703 4557043 YP_910474.1 CDS BAD_1611 NC_008618.1 2063210 2065924 R COG1472; Orthologue of VV21304; beta-glucosidase-related glycosidase complement(2063210..2065924) Bifidobacterium adolescentis ATCC 15703 4557044 YP_910475.1 CDS BAD_1612 NC_008618.1 2066277 2068433 D COG family: serine_threonine protein kinases; Orthologue of BL0660; PFAM_ID: pkinase; hypothetical protein 2066277..2068433 Bifidobacterium adolescentis ATCC 15703 4557045 YP_910476.1 CDS BAD_1613 NC_008618.1 2068469 2069473 D COG family: protein-disulfide isomerase; Orthologue of BL0659; hypothetical protein 2068469..2069473 Bifidobacterium adolescentis ATCC 15703 4557046 YP_910477.1 CDS BAD_1614 NC_008618.1 2069941 2071461 D COG family: uncharacterized Bcr; Orthologue of BL0658; hypothetical protein 2069941..2071461 Bifidobacterium adolescentis ATCC 15703 4557047 YP_910478.1 CDS ksgA NC_008618.1 2071513 2072424 D catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 2071513..2072424 Bifidobacterium adolescentis ATCC 15703 4556232 YP_910479.1 CDS ispE NC_008618.1 2072421 2073347 D COG family:4-diphosphocytidyl-2C-methyl-D- erythritol 2-phosphatesynthase; Orthologue of BL0656; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 2072421..2073347 Bifidobacterium adolescentis ATCC 15703 4556224 YP_910480.1 CDS BAD_1617 NC_008618.1 2073409 2074041 D Orthologue of BL0655; hypothetical protein 2073409..2074041 Bifidobacterium adolescentis ATCC 15703 4557048 YP_910481.1 CDS pcnA NC_008618.1 2074158 2075576 R COG family: tRNA nucleotidyltransferase _poly(A) polymerase; Orthologue of BL0654; PFAM_ID: HD; PFAM_ID:PolyA_pol; RNA nucleotidyltransferase complement(2074158..2075576) Bifidobacterium adolescentis ATCC 15703 4556547 YP_910482.1 CDS BAD_1619 NC_008618.1 2075688 2076338 D COG family: NTP pyrophosphohydrolases includingoxidative damage repair enzymes; Orthologue of BL0653; PFAM_ID: NUDIX; hypothetical protein 2075688..2076338 Bifidobacterium adolescentis ATCC 15703 4557049 YP_910483.1 CDS BAD_1620 NC_008618.1 2076302 2078461 D Orthologue of BL0652; hypothetical protein 2076302..2078461 Bifidobacterium adolescentis ATCC 15703 4557050 YP_910484.1 CDS BAD_1621 NC_008618.1 2078458 2080197 D COG family: uncharacterized membrane protein_putative virulence factor; Orthologue of BL0651; PFAM_ID: MVIN; hypothetical protein 2078458..2080197 Bifidobacterium adolescentis ATCC 15703 4557051 YP_910485.1 CDS BAD_1622 NC_008618.1 2080238 2082265 D Orthologue of BL0650; hypothetical protein 2080238..2082265 Bifidobacterium adolescentis ATCC 15703 4557052 YP_910486.1 CDS trxB NC_008618.1 2082438 2083379 D COG family: thioredoxin reductase; Orthologue of BL0649; PFAM_ID:pyr_redox; TrxB_ thioredoxin reductase (NADPH)_len: 322 aa; previously sequenced as SW:TRXB_STRCO(EMBL:AJ007313)_ TrxB. Contains PS00573 Pyridinenucleotide-disulphide oxidoreductases class-II active site; thioredoxin reductase 2082438..2083379 Bifidobacterium adolescentis ATCC 15703 4556729 YP_910487.1 CDS parB NC_008618.1 2083434 2084720 R COG family: predicted transcriptionalregulators; Orthologue of BL0648; PFAM_ID: ParBc; chromosome partitioning protein complement(2083434..2084720) Bifidobacterium adolescentis ATCC 15703 4556347 YP_910488.1 CDS parA NC_008618.1 2084723 2085667 R COG family: ATPases involved in chromosomepartitioning; Orthologue of BL0647; PFAM_ID: ParA; PFAM_ID: fer4_NifH; chromosome partitioning protein ParA complement(2084723..2085667) Bifidobacterium adolescentis ATCC 15703 4556346 YP_910489.1 CDS gidB NC_008618.1 2085946 2086695 R glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB complement(2085946..2086695) Bifidobacterium adolescentis ATCC 15703 4557703 YP_910490.1 CDS jag NC_008618.1 2086758 2087285 R COG family: predicted RNA-binding protein; Orthologue of BL0645; PFAM_ID: R3H; hypothetical protein complement(2086758..2087285) Bifidobacterium adolescentis ATCC 15703 4556229 YP_910491.1 CDS oxaA NC_008618.1 2087441 2088478 R COG family: preprotein translocase subunit YidC; Orthologue of BL0644; PFAM_ID: 60KD_IMP; membrane protein oxaA complement(2087441..2088478) Bifidobacterium adolescentis ATCC 15703 4556342 YP_910492.1 CDS BAD_1629 NC_008618.1 2088478 2088783 R COG family: uncharacterized Acr; Orthologue of BL0643; PFAM_ID: DUF37; hypothetical protein complement(2088478..2088783) Bifidobacterium adolescentis ATCC 15703 4557053 YP_910493.1 CDS rnpA NC_008618.1 2088807 2089172 R COG family: RNase P protein component; Orthologue of BL0642a; PFAM_ID: Ribonuclease_P; ribonuclease P protein component complement(2088807..2089172) Bifidobacterium adolescentis ATCC 15703 4556667 YP_910494.1 CDS rpmH NC_008618.1 2089193 2089375 R COG family: ribosomal protein L34; Orthologue of BL0642; PFAM_ID:Ribosomal_L34; 50S ribosomal protein L34 complement(2089193..2089375) Bifidobacterium adolescentis ATCC 15703 4556639 BAD_t0001 tRNA alaW NC_008618.1 13060 13132 R tRNA-Ala complement(13060..13132) Bifidobacterium adolescentis ATCC 15703 4557206 BAD_t0002 tRNA alaV NC_008618.1 13134 13206 R tRNA-Ala complement(13134..13206) Bifidobacterium adolescentis ATCC 15703 4557205 BAD_t0003 tRNA ileU NC_008618.1 13249 13322 R tRNA-Ile complement(13249..13322) Bifidobacterium adolescentis ATCC 15703 4556192 BAD_t0004 tRNA leuX NC_008618.1 64679 64761 R tRNA-Leu complement(64679..64761) Bifidobacterium adolescentis ATCC 15703 4556286 BAD_t0005 tRNA glyT NC_008618.1 81167 81240 D tRNA-Gly 81167..81240 Bifidobacterium adolescentis ATCC 15703 4556170 BAD_t0006 tRNA lysT NC_008618.1 152267 152339 R tRNA-Lys complement(152267..152339) Bifidobacterium adolescentis ATCC 15703 4556356 BAD_t0007 tRNA gluT NC_008618.1 240485 240560 D tRNA-Glu 240485..240560 Bifidobacterium adolescentis ATCC 15703 4556165 BAD_t0008 tRNA glnT NC_008618.1 240596 240670 D tRNA-Gln 240596..240670 Bifidobacterium adolescentis ATCC 15703 4557716 BAD_t0009 tRNA thrU NC_008618.1 302036 302111 D tRNA-Thr 302036..302111 Bifidobacterium adolescentis ATCC 15703 4557647 BAD_t0010 tRNA leuT NC_008618.1 302204 302284 D tRNA-Leu 302204..302284 Bifidobacterium adolescentis ATCC 15703 4556282 BAD_t0011 tRNA trpT NC_008618.1 320827 320902 R tRNA-Arg complement(320827..320902) Bifidobacterium adolescentis ATCC 15703 4556724 BAD_t0012 tRNA glyU NC_008618.1 342497 342570 D tRNA-Gly 342497..342570 Bifidobacterium adolescentis ATCC 15703 4556171 BAD_t0013 tRNA tyrT NC_008618.1 387948 388029 D tRNA-Tyr 387948..388029 Bifidobacterium adolescentis ATCC 15703 4556734 BAD_t0014 tRNA thrV NC_008618.1 388031 388103 D tRNA-Thr 388031..388103 Bifidobacterium adolescentis ATCC 15703 4557648 BAD_t0015 tRNA metU NC_008618.1 388109 388185 D tRNA-Met 388109..388185 Bifidobacterium adolescentis ATCC 15703 4556413 BAD_t0016 tRNA serV NC_008618.1 400738 400828 R tRNA-Ser complement(400738..400828) Bifidobacterium adolescentis ATCC 15703 4556716 BAD_t0017 tRNA serU NC_008618.1 442111 442196 R tRNA-Ser complement(442111..442196) Bifidobacterium adolescentis ATCC 15703 4556715 BAD_t0018 tRNA serT NC_008618.1 465693 465782 D tRNA-Ser 465693..465782 Bifidobacterium adolescentis ATCC 15703 4556714 BAD_t0019 tRNA proV NC_008618.1 474189 474265 R tRNA-Pro complement(474189..474265) Bifidobacterium adolescentis ATCC 15703 4556592 BAD_t0020 tRNA aspT NC_008618.1 490662 490738 R tRNA-Asp complement(490662..490738) Bifidobacterium adolescentis ATCC 15703 4557693 BAD_t0021 tRNA gluU NC_008618.1 493074 493145 D tRNA-Glu 493074..493145 Bifidobacterium adolescentis ATCC 15703 4556166 BAD_t0022 tRNA aspT NC_008618.1 493171 493244 D tRNA-Asp 493171..493244 Bifidobacterium adolescentis ATCC 15703 4557694 BAD_t0023 tRNA pheT NC_008618.1 493268 493343 D tRNA-Phe 493268..493343 Bifidobacterium adolescentis ATCC 15703 4556531 BAD_t0024 tRNA ileT NC_008618.1 553096 553169 D tRNA-Ile 553096..553169 Bifidobacterium adolescentis ATCC 15703 4556191 BAD_t0025 tRNA argT NC_008618.1 626466 626542 D tRNA-Arg 626466..626542 Bifidobacterium adolescentis ATCC 15703 4557398 BAD_t0026 tRNA glyV NC_008618.1 628730 628805 R tRNA-Gly complement(628730..628805) Bifidobacterium adolescentis ATCC 15703 4556172 BAD_t0027 tRNA valX NC_008618.1 628839 628911 R tRNA-Val complement(628839..628911) Bifidobacterium adolescentis ATCC 15703 4556747 BAD_t0028 tRNA valU NC_008618.1 628957 629028 R tRNA-Val complement(628957..629028) Bifidobacterium adolescentis ATCC 15703 4556745 BAD_t0029 tRNA hisT NC_008618.1 662621 662696 R tRNA-His complement(662621..662696) Bifidobacterium adolescentis ATCC 15703 4556179 BAD_t0030 tRNA argU NC_008618.1 738459 738535 D tRNA-Arg 738459..738535 Bifidobacterium adolescentis ATCC 15703 4557399 BAD_t0031 tRNA argV NC_008618.1 738577 738650 D tRNA-Arg 738577..738650 Bifidobacterium adolescentis ATCC 15703 4557400 BAD_t0032 tRNA leuU NC_008618.1 812748 812827 D tRNA-Leu 812748..812827 Bifidobacterium adolescentis ATCC 15703 4556283 BAD_t0033 tRNA leuV NC_008618.1 847728 847801 D tRNA-Leu 847728..847801 Bifidobacterium adolescentis ATCC 15703 4556284 BAD_t0034 tRNA proT NC_008618.1 856660 856736 D tRNA-Pro 856660..856736 Bifidobacterium adolescentis ATCC 15703 4556590 BAD_t0035 tRNA leuW NC_008618.1 904796 904886 R tRNA-Leu complement(904796..904886) Bifidobacterium adolescentis ATCC 15703 4556285 BAD_t0036 tRNA asnT NC_008618.1 972147 972219 D tRNA-Asn 972147..972219 Bifidobacterium adolescentis ATCC 15703 4557688 BAD_t0037 tRNA asnU NC_008618.1 972247 972319 D tRNA-Asn 972247..972319 Bifidobacterium adolescentis ATCC 15703 4557689 BAD_t0038 tRNA proU NC_008618.1 1018165 1018242 R tRNA-OTHER complement(1018165..1018242) Bifidobacterium adolescentis ATCC 15703 4556591 BAD_t0039 tRNA valX NC_008618.1 1028759 1028831 R tRNA-Val complement(1028759..1028831) Bifidobacterium adolescentis ATCC 15703 4556748 BAD_t0040 tRNA valU NC_008618.1 1028862 1028933 R tRNA-Val complement(1028862..1028933) Bifidobacterium adolescentis ATCC 15703 4556746 BAD_t0041 tRNA cysT NC_008618.1 1028974 1029044 R tRNA-Cys complement(1028974..1029044) Bifidobacterium adolescentis ATCC 15703 4556239 BAD_t0042 tRNA glyW NC_008618.1 1029072 1029147 R tRNA-Gly complement(1029072..1029147) Bifidobacterium adolescentis ATCC 15703 4556174 BAD_t0043 tRNA glyV NC_008618.1 1060541 1060616 R tRNA-Gly complement(1060541..1060616) Bifidobacterium adolescentis ATCC 15703 4556173 BAD_t0044 tRNA asnV NC_008618.1 1071291 1071366 R tRNA-Asn complement(1071291..1071366) Bifidobacterium adolescentis ATCC 15703 4557690 BAD_t0045 tRNA alaU NC_008618.1 1084173 1084245 R tRNA-Ala complement(1084173..1084245) Bifidobacterium adolescentis ATCC 15703 4557204 BAD_t0046 tRNA glnU NC_008618.1 1107262 1107335 D tRNA-Gln 1107262..1107335 Bifidobacterium adolescentis ATCC 15703 4557717 BAD_t0047 tRNA valT NC_008618.1 1435985 1436058 D tRNA-Val 1435985..1436058 Bifidobacterium adolescentis ATCC 15703 4556744 BAD_t0048 tRNA argW NC_008618.1 1522409 1522481 D tRNA-Arg 1522409..1522481 Bifidobacterium adolescentis ATCC 15703 4557401 BAD_t0049 tRNA argX NC_008618.1 1796364 1796439 R tRNA-Arg complement(1796364..1796439) Bifidobacterium adolescentis ATCC 15703 4557402 BAD_t0050 tRNA metT NC_008618.1 1810564 1810640 D tRNA-Met 1810564..1810640 Bifidobacterium adolescentis ATCC 15703 4556412 BAD_t0051 tRNA lysU NC_008618.1 1861607 1861680 R tRNA-Lys complement(1861607..1861680) Bifidobacterium adolescentis ATCC 15703 4556357 BAD_t0052 tRNA serW NC_008618.1 1904972 1905059 R tRNA-Ser complement(1904972..1905059) Bifidobacterium adolescentis ATCC 15703 4556717 BAD_t0053 tRNA alaT NC_008618.1 1951626 1951701 D tRNA-Ala 1951626..1951701 Bifidobacterium adolescentis ATCC 15703 4557203 BAD_t0054 tRNA thrT NC_008618.1 2069586 2069662 D tRNA-Thr 2069586..2069662 Bifidobacterium adolescentis ATCC 15703 4557646 BAD_1221a rRNA BAD_1221a NC_008618.1 1525217 1525338 R 5S ribosomal RNA complement(1525217..1525338) Bifidobacterium adolescentis ATCC 15703 5309684 BAD_r0001 rRNA rrfE NC_008618.1 1549800 1549916 R 5S ribosomal RNA complement(1549800..1549916) Bifidobacterium adolescentis ATCC 15703 4557614 BAD_r0002 rRNA rrlE NC_008618.1 1550111 1553191 R 23S ribosomal RNA complement(1550111..1553191) Bifidobacterium adolescentis ATCC 15703 4557619 BAD_r0003 rRNA rrsE NC_008618.1 1553631 1555164 R 16S ribosomal RNA complement(1553631..1555164) Bifidobacterium adolescentis ATCC 15703 4556700 BAD_r0004 rRNA BAD_r0004 NC_008618.1 1611079 1611195 R 5S ribosomal RNA complement(1611079..1611195) Bifidobacterium adolescentis ATCC 15703 4557054 BAD_r0005 rRNA rrlD NC_008618.1 1611391 1614470 R 23S ribosomal RNA complement(1611391..1614470) Bifidobacterium adolescentis ATCC 15703 4557618 BAD_r0006 rRNA rrsD NC_008618.1 1614924 1616459 R 16S ribosomal RNA complement(1614924..1616459) Bifidobacterium adolescentis ATCC 15703 4556699 BAD_r0007 rRNA rrfC NC_008618.1 1906098 1906214 R 5S ribosomal RNA complement(1906098..1906214) Bifidobacterium adolescentis ATCC 15703 4557613 BAD_r0008 rRNA rrlC NC_008618.1 1906411 1909492 R 23S ribosomal RNA complement(1906411..1909492) Bifidobacterium adolescentis ATCC 15703 4557617 BAD_r0009 rRNA rrsC NC_008618.1 1909939 1911469 R 16S ribosomal RNA complement(1909939..1911469) Bifidobacterium adolescentis ATCC 15703 4556698 BAD_r0010 rRNA rrfB NC_008618.1 1984547 1984663 R 5S ribosomal RNA complement(1984547..1984663) Bifidobacterium adolescentis ATCC 15703 4557612 BAD_r0011 rRNA rrlB NC_008618.1 1984860 1987940 R 23S ribosomal RNA complement(1984860..1987940) Bifidobacterium adolescentis ATCC 15703 4557616 BAD_r0012 rRNA rrsB NC_008618.1 1988380 1989913 R 16S ribosomal RNA complement(1988380..1989913) Bifidobacterium adolescentis ATCC 15703 4557621 BAD_r0013 rRNA rrfA NC_008618.1 2057159 2057275 R 5S ribosomal RNA complement(2057159..2057275) Bifidobacterium adolescentis ATCC 15703 4557611 BAD_r0014 rRNA rrlA NC_008618.1 2057472 2060552 R 23S ribosomal RNA complement(2057472..2060552) Bifidobacterium adolescentis ATCC 15703 4557615 BAD_r0015 rRNA rrsA NC_008618.1 2060993 2062526 R 16S ribosomal RNA complement(2060993..2062526) Bifidobacterium adolescentis ATCC 15703 4557620