-- dump date 20140619_003739 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type NP_886554.1 33598994 2662552 1..1920 1 NC_002927.3 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 1920 gidA 2662552 gidA Bordetella bronchiseptica RB50 tRNA uridine 5-carboxymethylaminomethyl modification protein GidA NP_886554.1 1 D 257310 CDS NP_886555.1 33598995 2662528 1917..2549 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0002; glucose inhibited division protein B 2549 gidB 2662528 gidB Bordetella bronchiseptica RB50 glucose inhibited division protein B NP_886555.1 1917 D 257310 CDS NP_886556.1 33598996 2662357 2546..3343 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0003; ParA family protein 3343 parA 2662357 parA Bordetella bronchiseptica RB50 ParA family protein NP_886556.1 2546 D 257310 CDS NP_886557.1 33598997 2662349 3350..4156 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0004; GNAT family acetyltransferase 4156 2662349 BB0004 Bordetella bronchiseptica RB50 GNAT family acetyltransferase NP_886557.1 3350 D 257310 CDS NP_886558.1 33598998 2662345 4200..5117 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0005; chromosome partitioning protein ParB 5117 parB 2662345 parB Bordetella bronchiseptica RB50 chromosome partitioning protein ParB NP_886558.1 4200 D 257310 CDS NP_886559.1 33598999 2662332 5110..6111 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0006; L-asparaginase II precursor 6111 ansB 2662332 ansB Bordetella bronchiseptica RB50 L-asparaginase II precursor NP_886559.1 5110 D 257310 CDS NP_886560.1 33599000 2662267 6707..7897 1 NC_002927.3 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 7897 tuf 2662267 tuf Bordetella bronchiseptica RB50 elongation factor Tu NP_886560.1 6707 D 257310 CDS NP_886561.1 33599001 2662378 8136..8516 1 NC_002927.3 forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 8516 secE 2662378 secE Bordetella bronchiseptica RB50 preprotein translocase subunit SecE NP_886561.1 8136 D 257310 CDS NP_886562.1 33599002 2661916 8526..9059 1 NC_002927.3 Modulates Rho-dependent transcription termination; transcription antitermination protein NusG 9059 nusG 2661916 nusG Bordetella bronchiseptica RB50 transcription antitermination protein NusG NP_886562.1 8526 D 257310 CDS NP_886563.1 33599003 2661653 9123..9554 1 NC_002927.3 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 9554 rplK 2661653 rplK Bordetella bronchiseptica RB50 50S ribosomal protein L11 NP_886563.1 9123 D 257310 CDS NP_886564.1 33599004 2659389 9557..10255 1 NC_002927.3 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 10255 rplA 2659389 rplA Bordetella bronchiseptica RB50 50S ribosomal protein L1 NP_886564.1 9557 D 257310 CDS NP_886565.1 33599005 2659321 10498..11022 1 NC_002927.3 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 11022 rplJ 2659321 rplJ Bordetella bronchiseptica RB50 50S ribosomal protein L10 NP_886565.1 10498 D 257310 CDS NP_886566.1 33599006 2662558 11104..11487 1 NC_002927.3 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 11487 rplL 2662558 rplL Bordetella bronchiseptica RB50 50S ribosomal protein L7/L12 NP_886566.1 11104 D 257310 CDS NP_886567.1 33599007 2662571 11623..15759 1 NC_002927.3 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 15759 rpoB 2662571 rpoB Bordetella bronchiseptica RB50 DNA-directed RNA polymerase subunit beta NP_886567.1 11623 D 257310 CDS NP_886568.1 33599008 2662520 15759..20003 1 NC_002927.3 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 20003 rpoC 2662520 rpoC Bordetella bronchiseptica RB50 DNA-directed RNA polymerase subunit beta' NP_886568.1 15759 D 257310 CDS NP_886569.1 33599009 2662535 complement(20112..20516) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0017; lipoprotein 20516 2662535 BB0016 Bordetella bronchiseptica RB50 lipoprotein NP_886569.1 20112 R 257310 CDS NP_886570.1 33599010 2662511 20757..21989 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0018; hypothetical protein 21989 2662511 BB0017 Bordetella bronchiseptica RB50 hypothetical protein NP_886570.1 20757 D 257310 CDS NP_886571.1 33599011 2662512 complement(22005..24350) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0019; two-component sensor protein 24350 2662512 BB0018 Bordetella bronchiseptica RB50 two-component sensor protein NP_886571.1 22005 R 257310 CDS NP_886572.1 33599012 2662144 complement(24352..25458) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0020; peptidoglycan binding protein 25458 2662144 BB0019 Bordetella bronchiseptica RB50 peptidoglycan binding protein NP_886572.1 24352 R 257310 CDS NP_886573.1 33599013 2659255 complement(25476..26210) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0021; two-component response regulator 26210 2659255 BB0020 Bordetella bronchiseptica RB50 two-component response regulator NP_886573.1 25476 R 257310 CDS NP_886574.1 33599014 2662548 26468..27280 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0022; two-component response regulator 27280 2662548 BB0021 Bordetella bronchiseptica RB50 two-component response regulator NP_886574.1 26468 D 257310 CDS NP_886575.1 33599015 2659776 complement(27310..28245) 1 NC_002927.3 metal transporter 28245 2659776 BB0022 Bordetella bronchiseptica RB50 metal transporter NP_886575.1 27310 R 257310 CDS NP_886576.1 33599016 2660243 complement(28251..28526) 1 NC_002927.3 hypothetical protein 28526 2660243 BB0023 Bordetella bronchiseptica RB50 hypothetical protein NP_886576.1 28251 R 257310 CDS NP_886577.2 161609284 2660060 29103..29480 1 NC_002927.3 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 29480 rpsL 2660060 rpsL Bordetella bronchiseptica RB50 30S ribosomal protein S12 NP_886577.2 29103 D 257310 CDS NP_886578.1 33599018 2659636 29644..30114 1 NC_002927.3 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 30114 rpsG 2659636 rpsG Bordetella bronchiseptica RB50 30S ribosomal protein S7 NP_886578.1 29644 D 257310 CDS NP_886579.1 33599019 2662567 30132..32234 1 NC_002927.3 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 32234 fusA 2662567 fusA Bordetella bronchiseptica RB50 elongation factor G NP_886579.1 30132 D 257310 CDS NP_886580.1 33599020 2660270 32311..33501 1 NC_002927.3 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 33501 tuf 2660270 tuf Bordetella bronchiseptica RB50 elongation factor Tu NP_886580.1 32311 D 257310 CDS NP_886581.1 33599021 2661798 33565..33876 1 NC_002927.3 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 33876 rpsJ 2661798 rpsJ Bordetella bronchiseptica RB50 30S ribosomal protein S10 NP_886581.1 33565 D 257310 CDS NP_886582.2 161609283 2659148 34234..34923 1 NC_002927.3 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 34923 rplC 2659148 rplC Bordetella bronchiseptica RB50 50S ribosomal protein L3 NP_886582.2 34234 D 257310 CDS NP_886583.1 33599023 2662246 34928..35545 1 NC_002927.3 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 35545 rplD 2662246 rplD Bordetella bronchiseptica RB50 50S ribosomal protein L4 NP_886583.1 34928 D 257310 CDS NP_886584.1 33599024 2662331 35542..35838 1 NC_002927.3 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 35838 rplW 2662331 rplW Bordetella bronchiseptica RB50 50S ribosomal protein L23 NP_886584.1 35542 D 257310 CDS NP_886585.1 33599025 2661287 35839..36666 1 NC_002927.3 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 36666 rplB 2661287 rplB Bordetella bronchiseptica RB50 50S ribosomal protein L2 NP_886585.1 35839 D 257310 CDS NP_886586.1 33599026 2662413 36679..36954 1 NC_002927.3 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 36954 rpsS 2662413 rpsS Bordetella bronchiseptica RB50 30S ribosomal protein S19 NP_886586.1 36679 D 257310 CDS NP_886587.1 33599027 2662435 36958..37287 1 NC_002927.3 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 37287 rplV 2662435 rplV Bordetella bronchiseptica RB50 50S ribosomal protein L22 NP_886587.1 36958 D 257310 CDS NP_886588.1 33599028 2662406 37297..38088 1 NC_002927.3 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 38088 rpsC 2662406 rpsC Bordetella bronchiseptica RB50 30S ribosomal protein S3 NP_886588.1 37297 D 257310 CDS NP_886589.1 33599029 2660136 38091..38507 1 NC_002927.3 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 38507 rplP 2660136 rplP Bordetella bronchiseptica RB50 50S ribosomal protein L16 NP_886589.1 38091 D 257310 CDS NP_886590.1 33599030 2659349 38518..38709 1 NC_002927.3 one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 38709 rpmC 2659349 rpmC Bordetella bronchiseptica RB50 50S ribosomal protein L29 NP_886590.1 38518 D 257310 CDS NP_886591.1 33599031 2660161 38711..38992 1 NC_002927.3 primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 38992 rpsQ 2660161 rpsQ Bordetella bronchiseptica RB50 30S ribosomal protein S17 NP_886591.1 38711 D 257310 CDS NP_886592.1 33599032 2660141 complement(39159..40022) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3623; hydrolase 40022 2660141 BB0039 Bordetella bronchiseptica RB50 hydrolase NP_886592.1 39159 R 257310 CDS NP_886593.1 33599033 2662328 complement(40109..41536) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3624; aldehyde dehydrogenase 41536 2662328 BB0040 Bordetella bronchiseptica RB50 aldehyde dehydrogenase NP_886593.1 40109 R 257310 CDS NP_886594.1 33599034 2660077 42435..42803 1 NC_002927.3 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 42803 rplN 2660077 rplN Bordetella bronchiseptica RB50 50S ribosomal protein L14 NP_886594.1 42435 D 257310 CDS NP_886595.1 33599035 2661671 42814..43134 1 NC_002927.3 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 43134 rplX 2661671 rplX Bordetella bronchiseptica RB50 50S ribosomal protein L24 NP_886595.1 42814 D 257310 CDS NP_886596.1 33599036 2661731 43147..43686 1 NC_002927.3 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 43686 rplE 2661731 rplE Bordetella bronchiseptica RB50 50S ribosomal protein L5 NP_886596.1 43147 D 257310 CDS NP_886597.1 33599037 2659717 43699..44004 1 NC_002927.3 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 44004 rpsN 2659717 rpsN Bordetella bronchiseptica RB50 30S ribosomal protein S14 NP_886597.1 43699 D 257310 CDS NP_886598.1 33599038 2659305 44015..44410 1 NC_002927.3 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 44410 rpsH 2659305 rpsH Bordetella bronchiseptica RB50 30S ribosomal protein S8 NP_886598.1 44015 D 257310 CDS NP_886599.1 33599039 2661760 44421..44954 1 NC_002927.3 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 44954 rplF 2661760 rplF Bordetella bronchiseptica RB50 50S ribosomal protein L6 NP_886599.1 44421 D 257310 CDS NP_886600.1 33599040 2661732 44976..45338 1 NC_002927.3 binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 45338 rplR 2661732 rplR Bordetella bronchiseptica RB50 50S ribosomal protein L18 NP_886600.1 44976 D 257310 CDS NP_886601.1 33599041 2661994 45354..45878 1 NC_002927.3 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 45878 rpsE 2661994 rpsE Bordetella bronchiseptica RB50 30S ribosomal protein S5 NP_886601.1 45354 D 257310 CDS NP_886602.1 33599042 2660158 45882..46067 1 NC_002927.3 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 46067 rpmD 2660158 rpmD Bordetella bronchiseptica RB50 50S ribosomal protein L30 NP_886602.1 45882 D 257310 CDS NP_886603.1 33599043 2661651 46077..46517 1 NC_002927.3 late assembly protein; 50S ribosomal protein L15 46517 rplO 2661651 rplO Bordetella bronchiseptica RB50 50S ribosomal protein L15 NP_886603.1 46077 D 257310 CDS NP_886604.1 33599044 2661764 46532..47857 1 NC_002927.3 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 47857 secY 2661764 secY Bordetella bronchiseptica RB50 preprotein translocase subunit SecY NP_886604.1 46532 D 257310 CDS NP_886605.1 33599045 2660240 47867..48085 1 NC_002927.3 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 48085 infA 2660240 infA Bordetella bronchiseptica RB50 translation initiation factor IF-1 NP_886605.1 47867 D 257310 CDS NP_886606.1 33599046 2660099 48120..48233 1 NC_002927.3 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 48233 rpmJ 2660099 rpmJ Bordetella bronchiseptica RB50 50S ribosomal protein L36 NP_886606.1 48120 D 257310 CDS NP_886607.1 33599047 2659288 48275..48640 1 NC_002927.3 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 48640 rpsM 2659288 rpsM Bordetella bronchiseptica RB50 30S ribosomal protein S13 NP_886607.1 48275 D 257310 CDS NP_886608.1 33599048 2659708 48656..49057 1 NC_002927.3 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 49057 rpsK 2659708 rpsK Bordetella bronchiseptica RB50 30S ribosomal protein S11 NP_886608.1 48656 D 257310 CDS NP_886609.1 33599049 2660271 49069..49692 1 NC_002927.3 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 49692 rpsD 2660271 rpsD Bordetella bronchiseptica RB50 30S ribosomal protein S4 NP_886609.1 49069 D 257310 CDS NP_886610.1 33599050 2660041 49907..50893 1 NC_002927.3 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 50893 rpoA 2660041 rpoA Bordetella bronchiseptica RB50 DNA-directed RNA polymerase subunit alpha NP_886610.1 49907 D 257310 CDS NP_886611.1 33599051 2659737 51052..51447 1 NC_002927.3 is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 51447 rplQ 2659737 rplQ Bordetella bronchiseptica RB50 50S ribosomal protein L17 NP_886611.1 51052 D 257310 CDS NP_886612.1 33599052 2661670 complement(51576..52013) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3644; histidine triad protein 52013 2661670 BB0059 Bordetella bronchiseptica RB50 histidine triad protein NP_886612.1 51576 R 257310 CDS NP_886613.1 33599053 2662411 52120..52461 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3645; divalent cation tolerance protein 52461 cutA 2662411 cutA Bordetella bronchiseptica RB50 divalent cation tolerance protein NP_886613.1 52120 D 257310 CDS NP_886614.1 33599054 2660046 52472..54409 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3646; thiol:disulfide interchange protein 54409 2660046 BB0061 Bordetella bronchiseptica RB50 thiol:disulfide interchange protein NP_886614.1 52472 D 257310 CDS NP_886615.1 33599055 2662427 54450..55487 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3647; hypothetical protein 55487 2662427 BB0062 Bordetella bronchiseptica RB50 hypothetical protein NP_886615.1 54450 D 257310 CDS NP_886616.1 33599056 2662431 complement(55484..56500) 1 NC_002927.3 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 56500 hemB 2662431 hemB Bordetella bronchiseptica RB50 delta-aminolevulinic acid dehydratase NP_886616.1 55484 R 257310 CDS NP_886617.1 33599057 2662478 complement(56497..57120) 1 NC_002927.3 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 57120 engB 2662478 engB Bordetella bronchiseptica RB50 ribosome biogenesis GTP-binding protein YsxC NP_886617.1 56497 R 257310 CDS NP_886618.1 33599058 2662492 57344..58045 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3650; cytochrome C precursor 58045 2662492 BB0065 Bordetella bronchiseptica RB50 cytochrome C precursor NP_886618.1 57344 D 257310 CDS NP_886619.1 33599059 2662490 58164..60260 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3651; hypothetical protein 60260 2662490 BB0066 Bordetella bronchiseptica RB50 hypothetical protein NP_886619.1 58164 D 257310 CDS NP_886620.1 33599060 2662500 60270..61604 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3652; cytochrome c asssembly protein 61604 2662500 BB0067 Bordetella bronchiseptica RB50 cytochrome c asssembly protein NP_886620.1 60270 D 257310 CDS NP_886621.1 33599061 2662510 complement(61675..62964) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3653; diaminopimelate decarboxylase 62964 lysA 2662510 lysA Bordetella bronchiseptica RB50 diaminopimelate decarboxylase NP_886621.1 61675 R 257310 CDS NP_886622.1 33599062 2662497 63178..63507 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3654; hypothetical protein 63507 cyaY 2662497 cyaY Bordetella bronchiseptica RB50 hypothetical protein NP_886622.1 63178 D 257310 CDS NP_886623.1 33599063 2660320 complement(63564..66008) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3655; penicillin-binding protein 1A 66008 2660320 BB0070 Bordetella bronchiseptica RB50 penicillin-binding protein 1A NP_886623.1 63564 R 257310 CDS NP_886624.1 33599064 2662361 66122..66757 1 NC_002927.3 catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase 66757 aroK 2662361 aroK Bordetella bronchiseptica RB50 shikimate kinase NP_886624.1 66122 D 257310 CDS NP_886625.1 33599065 2662499 66757..67833 1 NC_002927.3 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 67833 aroB 2662499 aroB Bordetella bronchiseptica RB50 3-dehydroquinate synthase NP_886625.1 66757 D 257310 CDS NP_886626.1 33599066 2662360 67830..68984 1 NC_002927.3 dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein 68984 2662360 BB0073 Bordetella bronchiseptica RB50 deoxyguanosinetriphosphate triphosphohydrolase-like protein NP_886626.1 67830 D 257310 CDS NP_886627.1 33599067 2662488 complement(69158..69817) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3659; glutathione S-transferase 69817 2662488 BB0074 Bordetella bronchiseptica RB50 glutathione S-transferase NP_886627.1 69158 R 257310 CDS NP_886628.1 33599068 2663850 complement(69874..72732) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3660; excinuclease ABC subunit A 72732 uvrA 2663850 uvrA Bordetella bronchiseptica RB50 excinuclease ABC subunit A NP_886628.1 69874 R 257310 CDS NP_886629.1 33599069 2663390 72888..74072 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3661; transport protein 74072 2663390 BB0076 Bordetella bronchiseptica RB50 transport protein NP_886629.1 72888 D 257310 CDS NP_886630.1 33599070 2662823 74305..74805 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3662; single-strand binding protein 74805 ssb 2662823 ssb Bordetella bronchiseptica RB50 single-strand binding protein NP_886630.1 74305 D 257310 CDS NP_886631.1 33599071 2663366 75038..77152 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3663; ferric siderophore receptor 77152 bfrC 2663366 bfrC Bordetella bronchiseptica RB50 ferric siderophore receptor NP_886631.1 75038 D 257310 CDS NP_886632.1 33599072 2663411 77289..77792 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3664; hypothetical protein 77792 2663411 BB0079 Bordetella bronchiseptica RB50 hypothetical protein NP_886632.1 77289 D 257310 CDS NP_886633.1 33599073 2663347 77811..78590 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3665; aldolase 78590 2663347 BB0080 Bordetella bronchiseptica RB50 aldolase NP_886633.1 77811 D 257310 CDS NP_886634.1 33599074 2663869 78619..79635 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3666; hypothetical protein 79635 2663869 BB0081 Bordetella bronchiseptica RB50 hypothetical protein NP_886634.1 78619 D 257310 CDS NP_886635.1 33599075 2663671 79689..80483 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3667; GntR family transcriptional regulator 80483 2663671 BB0082 Bordetella bronchiseptica RB50 GntR family transcriptional regulator NP_886635.1 79689 D 257310 CDS NP_886636.1 33599076 2663372 complement(80480..81421) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3668; transcriptional regulator 81421 2663372 BB0083 Bordetella bronchiseptica RB50 transcriptional regulator NP_886636.1 80480 R 257310 CDS NP_886637.1 33599077 2663168 81701..83191 1 NC_002927.3 Catalyzes the hydrolytic cleavage of a carbon-halogen bond in N-ethylammeline; N-ethylammeline chlorohydrolase 83191 2663168 BB0084 Bordetella bronchiseptica RB50 N-ethylammeline chlorohydrolase NP_886637.1 81701 D 257310 CDS NP_886638.1 33599078 2662867 83230..84216 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3670; hypothetical protein 84216 2662867 BB0085 Bordetella bronchiseptica RB50 hypothetical protein NP_886638.1 83230 D 257310 CDS NP_886639.1 33599079 2662821 84369..85514 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3671; glycosyl transferase family protein 85514 2662821 BB0086 Bordetella bronchiseptica RB50 glycosyl transferase family protein NP_886639.1 84369 D 257310 CDS NP_886640.1 33599080 2663669 85521..86339 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3672; hypothetical protein 86339 2663669 BB0087 Bordetella bronchiseptica RB50 hypothetical protein NP_886640.1 85521 D 257310 CDS NP_886641.1 33599081 2663412 86499..87470 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3673; LysR family transcriptional regulator 87470 2663412 BB0088 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_886641.1 86499 D 257310 CDS NP_886642.1 33599082 2663739 87496..88497 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3674; ABC transporter substrate-binding protein 88497 2663739 BB0089 Bordetella bronchiseptica RB50 ABC transporter substrate-binding protein NP_886642.1 87496 D 257310 CDS NP_886643.1 33599083 2663517 88561..89331 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3675; taurine ABC transporter permease 89331 2663517 BB0090 Bordetella bronchiseptica RB50 taurine ABC transporter permease NP_886643.1 88561 D 257310 CDS NP_886644.1 33599084 2663513 89319..90110 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3676; taurine ABC transporter ATP-binding protein 90110 2663513 BB0091 Bordetella bronchiseptica RB50 taurine ABC transporter ATP-binding protein NP_886644.1 89319 D 257310 CDS NP_886645.1 33599085 2663202 90138..91454 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3677; hypothetical protein 91454 2663202 BB0092 Bordetella bronchiseptica RB50 hypothetical protein NP_886645.1 90138 D 257310 CDS NP_886646.1 33599086 2663843 complement(91591..91779) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3678; hypothetical protein 91779 2663843 BB0093 Bordetella bronchiseptica RB50 hypothetical protein NP_886646.1 91591 R 257310 CDS NP_886647.1 33599087 2662925 complement(91788..92432) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3679; TetR family transcriptional regulator 92432 2662925 BB0094 Bordetella bronchiseptica RB50 TetR family transcriptional regulator NP_886647.1 91788 R 257310 CDS NP_886648.1 33599088 2662908 complement(92468..94645) 1 NC_002927.3 catalyzes the formation of malate from glyoxylate and acetyl-CoA; malate synthase G 94645 glcB 2662908 glcB Bordetella bronchiseptica RB50 malate synthase G NP_886648.1 92468 R 257310 CDS NP_886649.1 33599089 2661227 94889..95653 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3681; DNA-binding transcriptional regulator GlcC 95653 glcC 2661227 glcC Bordetella bronchiseptica RB50 DNA-binding transcriptional regulator GlcC NP_886649.1 94889 D 257310 CDS NP_886650.1 33599090 2663123 complement(95650..96777) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3682; dehydrogenase 96777 2663123 BB0097 Bordetella bronchiseptica RB50 dehydrogenase NP_886650.1 95650 R 257310 CDS NP_886651.1 33599091 2662996 complement(97002..97388) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3683; hypothetical protein 97388 2662996 BB0098 Bordetella bronchiseptica RB50 hypothetical protein NP_886651.1 97002 R 257310 CDS NP_886652.1 33599092 2663150 complement(97654..98580) 1 NC_002927.3 catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate, as part of the ubiquinone biosynthesis pathway; 4-hydroxybenzoate octaprenyltransferase 98580 ubiA 2663150 ubiA Bordetella bronchiseptica RB50 4-hydroxybenzoate octaprenyltransferase NP_886652.1 97654 R 257310 CDS NP_886653.1 33599093 2662848 complement(98667..99866) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3685; aminotransferase 99866 2662848 BB0100 Bordetella bronchiseptica RB50 aminotransferase NP_886653.1 98667 R 257310 CDS NP_886654.1 33599094 2663403 100005..100499 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3686; hypothetical protein 100499 2663403 BB0101 Bordetella bronchiseptica RB50 hypothetical protein NP_886654.1 100005 D 257310 CDS NP_886655.1 33599095 2663505 100787..101686 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3687; dihydrodipicolinate synthase 101686 2663505 BB0102 Bordetella bronchiseptica RB50 dihydrodipicolinate synthase NP_886655.1 100787 D 257310 CDS NP_886656.1 33599096 2663094 101913..102689 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3205; desaturase 102689 2663094 BB0103 Bordetella bronchiseptica RB50 desaturase NP_886656.1 101913 D 257310 CDS NP_886657.1 33599097 2663559 102673..103551 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3207; fatty acid desaturase 103551 2663559 BB0105 Bordetella bronchiseptica RB50 fatty acid desaturase NP_886657.1 102673 D 257310 CDS NP_886658.1 33599098 2663762 103579..105492 1 NC_002927.3 Catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; 3-oxoacyl-ACP synthase 105492 2663762 BB0106 Bordetella bronchiseptica RB50 3-oxoacyl-ACP synthase NP_886658.1 103579 D 257310 CDS NP_886659.1 33599099 2663060 105489..106370 1 NC_002927.3 hypothetical protein 106370 2663060 BB0107 Bordetella bronchiseptica RB50 hypothetical protein NP_886659.1 105489 D 257310 CDS NP_886660.1 33599100 2663050 complement(106377..107714) 1 NC_002927.3 amino acid permease 107714 2663050 BB0108 Bordetella bronchiseptica RB50 amino acid permease NP_886660.1 106377 R 257310 CDS NP_886661.1 33599101 2662917 complement(107711..108556) 1 NC_002927.3 methyltransferase 108556 2662917 BB0109 Bordetella bronchiseptica RB50 methyltransferase NP_886661.1 107711 R 257310 CDS NP_886662.1 33599102 2663022 108997..111906 1 NC_002927.3 Similar to Bordetella bronchiseptica outer membrane ligand binding protein BipA SWALL:Q9APE8 (EMBL:AF304006) (1578 aa) fasta scores: E(): 1.2e-114, 48.69% id in 807 aa, and to Escherichia coli O157:H7 adhesin EaeH or z0375 or ecs0336 SWALL:Q8X6G3 (EMBL:AE005207) (1417 aa) fasta scores: E(): 2.8e-16, 23.87% id in 1001 aa; adhesin 111906 2663022 BB0110 Bordetella bronchiseptica RB50 adhesin NP_886662.1 108997 D 257310 CDS NP_886663.1 33599103 2663511 112001..113629 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3209+BP0705; dehydrogenase 113629 2663511 BB0111 Bordetella bronchiseptica RB50 dehydrogenase NP_886663.1 112001 D 257310 CDS NP_886664.1 33599104 2663838 113756..115042 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0706; hypothetical protein 115042 2663838 BB0112 Bordetella bronchiseptica RB50 hypothetical protein NP_886664.1 113756 D 257310 CDS NP_886665.1 33599105 2663560 115216..115515 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0707; hypothetical protein 115515 2663560 BB0113 Bordetella bronchiseptica RB50 hypothetical protein NP_886665.1 115216 D 257310 CDS NP_886666.1 33599106 2663554 115516..116181 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0708; hypothetical protein 116181 2663554 BB0114 Bordetella bronchiseptica RB50 hypothetical protein NP_886666.1 115516 D 257310 CDS NP_886667.1 33599107 2663080 116222..118012 1 NC_002927.3 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 118012 aspS 2663080 aspS Bordetella bronchiseptica RB50 aspartyl-tRNA synthetase NP_886667.1 116222 D 257310 CDS NP_886668.1 33599108 2663766 118125..118985 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0710; endonuclease/exonuclease/phosphatase family protein 118985 2663766 BB0116 Bordetella bronchiseptica RB50 endonuclease/exonuclease/phosphatase family protein NP_886668.1 118125 D 257310 CDS NP_886669.1 33599109 2663776 118982..120193 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0711; phospholipase 120193 2663776 BB0117 Bordetella bronchiseptica RB50 phospholipase NP_886669.1 118982 D 257310 CDS NP_886670.1 33599110 2663499 complement(120194..121078) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0712; hypothetical protein 121078 2663499 BB0118 Bordetella bronchiseptica RB50 hypothetical protein NP_886670.1 120194 R 257310 CDS NP_886671.1 33599111 2663051 complement(121094..122527) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0713; hypothetical protein 122527 2663051 BB0119 Bordetella bronchiseptica RB50 hypothetical protein NP_886671.1 121094 R 257310 CDS NP_886672.1 33599112 2663777 complement(122578..123147) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0715; hypothetical protein 123147 2663777 BB0120 Bordetella bronchiseptica RB50 hypothetical protein NP_886672.1 122578 R 257310 CDS NP_886673.1 33599113 2661763 123421..124398 1 NC_002927.3 NAD dependent epimerase/dehydratase family protein 124398 2661763 BB0121 Bordetella bronchiseptica RB50 NAD dependent epimerase/dehydratase family protein NP_886673.1 123421 D 257310 CDS NP_886674.1 33599114 2660165 124395..125555 1 NC_002927.3 DegT/DnrJ/EryC1/StrS aminotransferase family protein 125555 2660165 BB0122 Bordetella bronchiseptica RB50 DegT/DnrJ/EryC1/StrS aminotransferase family protein NP_886674.1 124395 D 257310 CDS NP_886675.1 33599115 2661667 125694..127589 1 NC_002927.3 Similar to Mycobacterium tuberculosis asparagine synthetase [glutamine-hydrolyzing] rv2201 or mt2257 or mtcy190.12 SWALL:ASNH_MYCTU (SWALL:Q10374) (652 aa) fasta scores: E(): 2.8e-41, 30.4% id in 671 aa; asparagine synthetase 127589 2661667 BB0123 Bordetella bronchiseptica RB50 asparagine synthetase NP_886675.1 125694 D 257310 CDS NP_886676.1 33599116 2659258 127586..128509 1 NC_002927.3 Similar to Streptomyces venezuelae TDP-glucose-4,6-dehydratase DesiV SWALL:Q9ZGH3 (EMBL:AF079762) (337 aa) fasta scores: E(): 4e-12, 27.07% id in 314 aa, and to Pyrococcus abyssi UDP-glucose 4-epimerase Pab2145 SWALL:Q9V1X1 (EMBL:AJ248284) (307 aa) fasta scores: E(): 1.7e-13, 27.85% id in 298 aa; UDP-glucose 4-epimerase 128509 2659258 BB0124 Bordetella bronchiseptica RB50 UDP-glucose 4-epimerase NP_886676.1 127586 D 257310 CDS NP_886677.1 33599117 2660267 128487..129164 1 NC_002927.3 Similar to Methanopyrus kandleri diadenosine tetraphosphatase apah or mk0804 SWALL:Q8TX71 (EMBL:AE010371) (232 aa) fasta scores: E(): 4.9e-14, 32.68% id in 205 aa, and to Pyrococcus horikoshii hypothetical protein Ph1616 ph1616 SWALL:O59233 (EMBL:AP000006) (233 aa) fasta scores: E(): 1.6e-13, 35.21% id in 213 aa; phosphoesterase 129164 2660267 BB0125 Bordetella bronchiseptica RB50 phosphoesterase NP_886677.1 128487 D 257310 CDS NP_886678.1 33599118 2660174 129177..130247 1 NC_002927.3 undetermined role; similar to CarB protein but much smaller; carbamoyl phosphate synthase-like protein 130247 2660174 BB0126 Bordetella bronchiseptica RB50 carbamoyl phosphate synthase-like protein NP_886678.1 129177 D 257310 CDS NP_886679.1 33599119 2660124 130255..131418 1 NC_002927.3 Similar to Streptomyces rishiriensis C-methyltransferase CouU SWALL:Q9F8S9 (EMBL:AF235050) (420 aa) fasta scores: E(): 7.6e-07, 25.95% id in 339 aa, and to Rhizobium meliloti NDP-hexose 3-C-methyltransferase Rb0640 or Smb21061 SWALL:Q92VQ9 (EMBL:AL603644) (415 aa) fasta scores: E(): 3.4e-09, 29.64% id in 280 aa; C-methyltransferase 131418 2660124 BB0127 Bordetella bronchiseptica RB50 C-methyltransferase NP_886679.1 130255 D 257310 CDS NP_886680.1 33599120 2659635 131477..132247 1 NC_002927.3 hypothetical protein 132247 wbmS 2659635 wbmS Bordetella bronchiseptica RB50 hypothetical protein NP_886680.1 131477 D 257310 CDS NP_886681.1 33599121 2661735 132244..133173 1 NC_002927.3 formyl transferase 133173 wbmR 2661735 wbmR Bordetella bronchiseptica RB50 formyl transferase NP_886681.1 132244 D 257310 CDS NP_886682.1 33599122 2659161 133281..134606 1 NC_002927.3 hypothetical protein 134606 wbmO 2659161 wbmO Bordetella bronchiseptica RB50 hypothetical protein NP_886682.1 133281 D 257310 CDS NP_886683.1 33599123 2659162 134603..135772 1 NC_002927.3 ABC transporter ATP-binding protein 135772 wbmN 2659162 wbmN Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_886683.1 134603 D 257310 CDS NP_886684.1 33599124 2660228 135765..136973 1 NC_002927.3 ABC transporter ATP-binding protein 136973 wbmM 2660228 wbmM Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_886684.1 135765 D 257310 CDS NP_886685.1 33599125 2661699 136980..137771 1 NC_002927.3 ABC transporter 137771 wbmL 2661699 wbmL Bordetella bronchiseptica RB50 ABC transporter NP_886685.1 136980 D 257310 CDS NP_886686.1 33599126 2659144 137768..140368 1 NC_002927.3 hypothetical protein 140368 wbmK 2659144 wbmK Bordetella bronchiseptica RB50 hypothetical protein NP_886686.1 137768 D 257310 CDS NP_886687.1 33599127 2660118 140424..143060 1 NC_002927.3 hypothetical protein 143060 wbmJ 2660118 wbmJ Bordetella bronchiseptica RB50 hypothetical protein NP_886687.1 140424 D 257310 CDS NP_886688.1 33599128 2660172 143161..145071 1 NC_002927.3 asparagine synthetase 145071 wbmI 2660172 wbmI Bordetella bronchiseptica RB50 asparagine synthetase NP_886688.1 143161 D 257310 CDS NP_886689.1 33599129 2660170 145100..146041 1 NC_002927.3 nucleotide sugar epimerase/dehydratase 146041 wbmH 2660170 wbmH Bordetella bronchiseptica RB50 nucleotide sugar epimerase/dehydratase NP_886689.1 145100 D 257310 CDS NP_886690.1 33599130 2662020 146046..146978 1 NC_002927.3 nucleotide sugar epimerase/dehydratase 146978 wbmG 2662020 wbmG Bordetella bronchiseptica RB50 nucleotide sugar epimerase/dehydratase NP_886690.1 146046 D 257310 CDS NP_886691.1 33599131 2660132 146983..148056 1 NC_002927.3 nucleotide sugar epimerase/dehydratase 148056 wbmF 2660132 wbmF Bordetella bronchiseptica RB50 nucleotide sugar epimerase/dehydratase NP_886691.1 146983 D 257310 CDS NP_886692.1 33599132 2660185 complement(148416..149597) 1 NC_002927.3 papain-like transglutaminase superfamily protein 149597 wbmE 2660185 wbmE Bordetella bronchiseptica RB50 papain-like transglutaminase superfamily protein NP_886692.1 148416 R 257310 CDS NP_886693.1 33599133 2660129 complement(149720..150742) 1 NC_002927.3 hypothetical protein 150742 wbmD 2660129 wbmD Bordetella bronchiseptica RB50 hypothetical protein NP_886693.1 149720 R 257310 CDS NP_886694.1 33599134 2661894 complement(150818..152704) 1 NC_002927.3 glutamine amidotransferase 152704 wbmC 2661894 wbmC Bordetella bronchiseptica RB50 glutamine amidotransferase NP_886694.1 150818 R 257310 CDS NP_886695.1 33599135 2661728 152766..153866 1 NC_002927.3 hypothetical protein 153866 wbmB 2661728 wbmB Bordetella bronchiseptica RB50 hypothetical protein NP_886695.1 152766 D 257310 CDS NP_886696.1 33599136 2660220 153856..155073 1 NC_002927.3 glycosyl transferase family protein 155073 wbmA 2660220 wbmA Bordetella bronchiseptica RB50 glycosyl transferase family protein NP_886696.1 153856 D 257310 CDS NP_886697.1 33599137 2661766 complement(155091..156965) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) bplL; lipopolysaccharide biosynthesis protein 156965 bplL 2661766 bplL Bordetella bronchiseptica RB50 lipopolysaccharide biosynthesis protein NP_886697.1 155091 R 257310 CDS NP_886698.1 33599138 2659399 complement(157014..158261) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) bplJ; hypothetical protein 158261 bplJ 2659399 bplJ Bordetella bronchiseptica RB50 hypothetical protein NP_886698.1 157014 R 257310 CDS NP_886699.1 33599139 2661680 complement(158311..159015) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) bplI; lipopolysaccharide biosynthesis protein 159015 bplI 2661680 bplI Bordetella bronchiseptica RB50 lipopolysaccharide biosynthesis protein NP_886699.1 158311 R 257310 CDS NP_886700.1 33599140 2661816 complement(159012..160118) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) bplH; glycosyl transferase family protein 160118 bplH 2661816 bplH Bordetella bronchiseptica RB50 glycosyl transferase family protein NP_886700.1 159012 R 257310 CDS NP_886701.1 33599141 2661913 complement(160380..160973) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) bplG; sugar transferase 160973 bplG 2661913 bplG Bordetella bronchiseptica RB50 sugar transferase NP_886701.1 160380 R 257310 CDS NP_886702.1 33599142 2661640 complement(160970..162202) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) bplF; lipopolysaccharide biosynthesis protein 162202 bplF 2661640 bplF Bordetella bronchiseptica RB50 lipopolysaccharide biosynthesis protein NP_886702.1 160970 R 257310 CDS NP_886703.1 33599143 2661703 complement(162220..163479) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) bplE; glycosyl transferase family protein 163479 bplE 2661703 bplE Bordetella bronchiseptica RB50 glycosyl transferase family protein NP_886703.1 162220 R 257310 CDS NP_886704.1 33599144 2661785 complement(163503..164489) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) bplD; UDP-N-acetylglucosamine 2-epimerase 164489 bplD 2661785 bplD Bordetella bronchiseptica RB50 UDP-N-acetylglucosamine 2-epimerase NP_886704.1 163503 R 257310 CDS NP_886705.1 33599145 2661823 complement(164599..165699) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) bplC; lipopolysaccharide biosynthesis protein 165699 bplC 2661823 bplC Bordetella bronchiseptica RB50 lipopolysaccharide biosynthesis protein NP_886705.1 164599 R 257310 CDS NP_886706.1 33599146 2661918 complement(165703..166278) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) bplB; acetyltransferase 166278 bplB 2661918 bplB Bordetella bronchiseptica RB50 acetyltransferase NP_886706.1 165703 R 257310 CDS NP_886707.1 33599147 2662247 complement(166282..167334) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) bplA; oxidoreductase 167334 bplA 2662247 bplA Bordetella bronchiseptica RB50 oxidoreductase NP_886707.1 166282 R 257310 CDS NP_886708.1 33599148 2662268 167510..168472 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0094; heptosyltransferase 168472 rfaC 2662268 rfaC Bordetella bronchiseptica RB50 heptosyltransferase NP_886708.1 167510 D 257310 CDS NP_886709.1 33599149 2662269 168474..169766 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0095; 3-deoxy-D-manno-octulosonic-acid transferase 169766 kdtA 2662269 kdtA Bordetella bronchiseptica RB50 3-deoxy-D-manno-octulosonic-acid transferase NP_886709.1 168474 D 257310 CDS NP_886710.1 33599150 2662276 complement(169792..170628) 1 NC_002927.3 hypothetical protein 170628 2662276 BB0158 Bordetella bronchiseptica RB50 hypothetical protein NP_886710.1 169792 R 257310 CDS NP_886711.1 33599151 2662277 complement(170799..170954) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0096; Previously sequenced as Bordetella bronchiseptica secreted protein Bblps1.35C SWALL:O88004 (EMBL:AJ007747) (51 aa) fasta scores: E(): 5.1e-20, 100% id in 51 aa; hypothetical protein 170954 2662277 BB0159 Bordetella bronchiseptica RB50 hypothetical protein NP_886711.1 170799 R 257310 CDS NP_886712.1 33599152 2662293 complement(170980..171783) 1 NC_002927.3 type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase 171783 baf 2662293 baf Bordetella bronchiseptica RB50 pantothenate kinase NP_886712.1 170980 R 257310 CDS NP_886713.1 33599153 2662359 complement(171780..172622) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0098; biotin--protein ligase 172622 birA 2662359 birA Bordetella bronchiseptica RB50 biotin--protein ligase NP_886713.1 171780 R 257310 CDS NP_886714.1 33599154 2662536 172715..173851 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0099; integral membrane protein 173851 2662536 BB0163 Bordetella bronchiseptica RB50 integral membrane protein NP_886714.1 172715 D 257310 CDS NP_886715.1 33599155 2659083 173851..174690 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0100; ABC transporter ATP-binding protein 174690 2659083 BB0164 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_886715.1 173851 D 257310 CDS NP_886716.1 33599156 2659380 174677..175624 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0101; hypothetical protein 175624 2659380 BB0165 Bordetella bronchiseptica RB50 hypothetical protein NP_886716.1 174677 D 257310 CDS NP_886717.1 33599157 2659050 175625..176230 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0101A; hypothetical protein 176230 2659050 BB0166 Bordetella bronchiseptica RB50 hypothetical protein NP_886717.1 175625 D 257310 CDS NP_886718.1 33599158 2662104 176260..176913 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0101B; hypothetical protein 176913 2662104 BB0167 Bordetella bronchiseptica RB50 hypothetical protein NP_886718.1 176260 D 257310 CDS NP_886719.1 33599159 2662096 177046..178302 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0102; penicillin-binding protein precursor 178302 2662096 BB0168 Bordetella bronchiseptica RB50 penicillin-binding protein precursor NP_886719.1 177046 D 257310 CDS NP_886720.1 33599160 2662155 178305..179249 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0103; class IV aminotransferase 179249 2662155 BB0169 Bordetella bronchiseptica RB50 class IV aminotransferase NP_886720.1 178305 D 257310 CDS NP_886721.1 33599161 2659381 179325..179600 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0104; hypothetical protein 179600 2659381 BB0170 Bordetella bronchiseptica RB50 hypothetical protein NP_886721.1 179325 D 257310 CDS NP_886722.1 33599162 2660094 179608..180270 1 NC_002927.3 lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein; lipoate-protein ligase B 180270 lipB 2660094 lipB Bordetella bronchiseptica RB50 lipoate-protein ligase B NP_886722.1 179608 D 257310 CDS NP_886723.1 33599163 2662572 180332..181333 1 NC_002927.3 catalyzes the radical-mediated insertion of two sulfur atoms into an ACP (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 181333 lipA 2662572 lipA Bordetella bronchiseptica RB50 lipoyl synthase NP_886723.1 180332 D 257310 CDS NP_886724.1 33599164 2662561 complement(181348..181896) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0107; dTDP-4-dehydrorhamnose 3,5-epimerase 181896 rfbC 2662561 rfbC Bordetella bronchiseptica RB50 dTDP-4-dehydrorhamnose 3,5-epimerase NP_886724.1 181348 R 257310 CDS NP_886725.1 33599165 2662553 complement(181954..182850) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0108; dTDP-4-dehydrorhamnose reductase 182850 rfbD 2662553 rfbD Bordetella bronchiseptica RB50 dTDP-4-dehydrorhamnose reductase NP_886725.1 181954 R 257310 CDS NP_886726.1 33599166 2662557 complement(182847..183908) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0109; dTDP-glucose 4,6-dehydratase 183908 rfbB 2662557 rfbB Bordetella bronchiseptica RB50 dTDP-glucose 4,6-dehydratase NP_886726.1 182847 R 257310 CDS NP_886727.1 33599167 2662541 complement(183944..184504) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3090; hypothetical protein 184504 2662541 BB0176 Bordetella bronchiseptica RB50 hypothetical protein NP_886727.1 183944 R 257310 CDS NP_886728.1 33599168 2662538 184927..185232 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3088; hypothetical protein 185232 2662538 BB0177 Bordetella bronchiseptica RB50 hypothetical protein NP_886728.1 184927 D 257310 CDS NP_886729.1 33599169 2662534 complement(185275..186609) 1 NC_002927.3 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding protein HslU 186609 hslU 2662534 hslU Bordetella bronchiseptica RB50 ATP-dependent protease ATP-binding protein HslU NP_886729.1 185275 R 257310 CDS NP_886730.1 33599170 2662527 complement(186631..187170) 1 NC_002927.3 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 187170 hslV 2662527 hslV Bordetella bronchiseptica RB50 ATP-dependent protease peptidase subunit NP_886730.1 186631 R 257310 CDS NP_886731.1 33599171 2662521 complement(187318..187782) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3085; dnaK suppressor protein 187782 dksA 2662521 dksA Bordetella bronchiseptica RB50 dnaK suppressor protein NP_886731.1 187318 R 257310 CDS NP_886732.1 33599172 2662517 complement(187926..189035) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3084; hypothetical protein 189035 2662517 BB0181 Bordetella bronchiseptica RB50 hypothetical protein NP_886732.1 187926 R 257310 CDS NP_886733.1 33599173 2662503 complement(189312..189815) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3083; regulatory protein 189815 2662503 BB0182 Bordetella bronchiseptica RB50 regulatory protein NP_886733.1 189312 R 257310 CDS NP_886734.1 33599174 2662504 190144..190866 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3082; transport protein ATP-binding 190866 2662504 BB0183 Bordetella bronchiseptica RB50 transport protein ATP-binding NP_886734.1 190144 D 257310 CDS NP_886735.1 33599175 2662494 190863..191759 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3081; ABC transporter permease 191759 2662494 BB0184 Bordetella bronchiseptica RB50 ABC transporter permease NP_886735.1 190863 D 257310 CDS NP_886736.1 33599176 2662493 191756..192685 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3080; ABC transporter substrate-binding protein 192685 2662493 BB0185 Bordetella bronchiseptica RB50 ABC transporter substrate-binding protein NP_886736.1 191756 D 257310 CDS NP_886737.1 33599177 2662477 192733..193314 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3079; hypothetical protein 193314 2662477 BB0186 Bordetella bronchiseptica RB50 hypothetical protein NP_886737.1 192733 D 257310 CDS NP_886738.1 33599178 2662400 193305..194273 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3078; hypothetical protein 194273 2662400 BB0187 Bordetella bronchiseptica RB50 hypothetical protein NP_886738.1 193305 D 257310 CDS NP_886739.1 33599179 2662475 194322..196463 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3077; outer membrane protein 196463 2662475 BB0189 Bordetella bronchiseptica RB50 outer membrane protein NP_886739.1 194322 D 257310 CDS NP_886740.1 33599180 2662470 complement(196476..197456) 1 NC_002927.3 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC 197456 xerC 2662470 xerC Bordetella bronchiseptica RB50 site-specific tyrosine recombinase XerC NP_886740.1 196476 R 257310 CDS NP_886741.1 33599181 2662463 complement(197471..198163) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3075; hypothetical protein 198163 2662463 BB0191 Bordetella bronchiseptica RB50 hypothetical protein NP_886741.1 197471 R 257310 CDS NP_886742.1 33599182 2662464 complement(198190..199101) 1 NC_002927.3 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 199101 dapF 2662464 dapF Bordetella bronchiseptica RB50 diaminopimelate epimerase NP_886742.1 198190 R 257310 CDS NP_886743.1 33599183 2662449 complement(199144..200034) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3073; acyltransferase 200034 2662449 BB0193 Bordetella bronchiseptica RB50 acyltransferase NP_886743.1 199144 R 257310 CDS NP_886744.1 33599184 2662448 complement(200031..200897) 1 NC_002927.3 Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis lauroyl acyltransferase 200897 2662448 BB0194 Bordetella bronchiseptica RB50 lipid A biosynthesis lauroyl acyltransferase NP_886744.1 200031 R 257310 CDS NP_886745.2 161609282 2662446 201180..202343 1 NC_002927.3 methionine adenosyltransferase; catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 202343 metK 2662446 metK Bordetella bronchiseptica RB50 S-adenosylmethionine synthetase NP_886745.2 201180 D 257310 CDS NP_886746.1 33599186 2662415 202454..202702 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3070; hypothetical protein 202702 2662415 BB0196 Bordetella bronchiseptica RB50 hypothetical protein NP_886746.1 202454 D 257310 CDS NP_886747.1 33599187 2662433 202782..203822 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3069; glycosyl transferase family protein 203822 2662433 BB0197 Bordetella bronchiseptica RB50 glycosyl transferase family protein NP_886747.1 202782 D 257310 CDS NP_886748.1 33599188 2662414 204102..205520 1 NC_002927.3 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase 205520 acyH 2662414 acyH Bordetella bronchiseptica RB50 S-adenosyl-L-homocysteine hydrolase NP_886748.1 204102 D 257310 CDS NP_886749.1 33599189 2662399 205591..205926 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3067; hypothetical protein 205926 2662399 BB0199 Bordetella bronchiseptica RB50 hypothetical protein NP_886749.1 205591 D 257310 CDS NP_886750.1 33599190 2662395 205926..206768 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3066; methylenetetrahydrofolate reductase 206768 2662395 BB0200 Bordetella bronchiseptica RB50 methylenetetrahydrofolate reductase NP_886750.1 205926 D 257310 CDS NP_886751.1 33599191 2662394 complement(206832..207803) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3064; transcriptional regulator 207803 2662394 BB0201 Bordetella bronchiseptica RB50 transcriptional regulator NP_886751.1 206832 R 257310 CDS NP_886752.1 33599192 2662381 complement(207867..208886) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3063; aminohydrolase 208886 2662381 BB0202 Bordetella bronchiseptica RB50 aminohydrolase NP_886752.1 207867 R 257310 CDS NP_886753.1 33599193 2662371 complement(208888..210261) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3062; integral membrane transport protein 210261 2662371 BB0203 Bordetella bronchiseptica RB50 integral membrane transport protein NP_886753.1 208888 R 257310 CDS NP_886754.1 33599194 2662372 complement(210539..211219) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3061; 5-formyltetrahydrofolate cyclo-ligase 211219 2662372 BB0205 Bordetella bronchiseptica RB50 5-formyltetrahydrofolate cyclo-ligase NP_886754.1 210539 R 257310 CDS NP_886755.1 33599195 2662366 211232..213358 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3060; transglycosylase 213358 2662366 BB0206 Bordetella bronchiseptica RB50 transglycosylase NP_886755.1 211232 D 257310 CDS NP_886756.1 33599196 2662352 213355..214449 1 NC_002927.3 catalyzes the addition and repair of the 3'-terminal CCA sequence in tRNA; these proteins belong to the CCA-adding enzyme subfamily 2 which does not have phosphohydrolase activity; tRNA CCA-pyrophosphorylase 214449 cca 2662352 cca Bordetella bronchiseptica RB50 tRNA CCA-pyrophosphorylase NP_886756.1 213355 D 257310 CDS NP_886757.1 33599197 2662341 complement(214464..215723) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3058; hypothetical protein 215723 2662341 BB0208 Bordetella bronchiseptica RB50 hypothetical protein NP_886757.1 214464 R 257310 CDS NP_886758.1 33599198 2662333 complement(215743..217467) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3057; ATP-dependent RNA helicase 217467 2662333 BB0209 Bordetella bronchiseptica RB50 ATP-dependent RNA helicase NP_886758.1 215743 R 257310 CDS NP_886759.1 33599199 2662329 complement(217706..218458) 1 NC_002927.3 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 218458 ung 2662329 ung Bordetella bronchiseptica RB50 uracil-DNA glycosylase NP_886759.1 217706 R 257310 CDS NP_886760.1 33599200 2662317 complement(218495..219223) 1 NC_002927.3 haloacid dehalogenase-like hydrolase 219223 2662317 BB0211 Bordetella bronchiseptica RB50 haloacid dehalogenase-like hydrolase NP_886760.1 218495 R 257310 CDS NP_886761.1 33599201 2662316 complement(219276..220013) 1 NC_002927.3 enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 220013 2662316 BB0212 Bordetella bronchiseptica RB50 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase NP_886761.1 219276 R 257310 CDS NP_886762.1 33599202 2662313 220172..220987 1 NC_002927.3 hypothetical protein 220987 2662313 BB0213 Bordetella bronchiseptica RB50 hypothetical protein NP_886762.1 220172 D 257310 CDS NP_886763.1 33599203 2662310 complement(220993..221772) 1 NC_002927.3 AraC family transcriptional regulator 221772 2662310 BB0214 Bordetella bronchiseptica RB50 AraC family transcriptional regulator NP_886763.1 220993 R 257310 CDS NP_886764.1 33599204 2662309 221884..222324 1 NC_002927.3 ferric uptake regulation protein 222324 fur 2662309 fur Bordetella bronchiseptica RB50 ferric uptake regulation protein NP_886764.1 221884 D 257310 CDS NP_886765.1 33599205 2662295 222321..222719 1 NC_002927.3 hypothetical protein 222719 2662295 BB0216 Bordetella bronchiseptica RB50 hypothetical protein NP_886765.1 222321 D 257310 CDS NP_886766.1 33599206 2662298 complement(222727..223923) 1 NC_002927.3 Na+/H+ antiporter protein 223923 2662298 BB0217 Bordetella bronchiseptica RB50 Na+/H+ antiporter protein NP_886766.1 222727 R 257310 CDS NP_886767.1 33599207 2662294 224115..224465 1 NC_002927.3 hypothetical protein 224465 2662294 BB0218 Bordetella bronchiseptica RB50 hypothetical protein NP_886767.1 224115 D 257310 CDS NP_886768.1 33599208 2662296 224449..225582 1 NC_002927.3 glycosyl transferase family protein 225582 2662296 BB0219 Bordetella bronchiseptica RB50 glycosyl transferase family protein NP_886768.1 224449 D 257310 CDS NP_886769.1 33599209 2662280 complement(225592..226056) 1 NC_002927.3 hypothetical protein 226056 2662280 BB0220 Bordetella bronchiseptica RB50 hypothetical protein NP_886769.1 225592 R 257310 CDS NP_886770.1 33599210 2662271 complement(226053..226502) 1 NC_002927.3 acetyltransferase (GNAT) family protein 226502 2662271 BB0221 Bordetella bronchiseptica RB50 acetyltransferase (GNAT) family protein NP_886770.1 226053 R 257310 CDS NP_886771.1 33599211 2662272 complement(226535..228058) 1 NC_002927.3 hypothetical protein 228058 2662272 BB0222 Bordetella bronchiseptica RB50 hypothetical protein NP_886771.1 226535 R 257310 CDS NP_886772.1 33599212 2662265 complement(228072..228941) 1 NC_002927.3 metallo-beta-lactamase superfamily protein 228941 2662265 BB0223 Bordetella bronchiseptica RB50 metallo-beta-lactamase superfamily protein NP_886772.1 228072 R 257310 CDS NP_886773.1 33599213 2662255 229045..229380 1 NC_002927.3 transcription regulator ArsR 229380 2662255 BB0224 Bordetella bronchiseptica RB50 transcription regulator ArsR NP_886773.1 229045 D 257310 CDS NP_886774.1 33599214 2662250 229377..229808 1 NC_002927.3 hypothetical protein 229808 2662250 BB0225 Bordetella bronchiseptica RB50 hypothetical protein NP_886774.1 229377 D 257310 CDS NP_886775.1 33599215 2662245 229810..230226 1 NC_002927.3 hypothetical protein 230226 2662245 BB0226 Bordetella bronchiseptica RB50 hypothetical protein NP_886775.1 229810 D 257310 CDS NP_886776.1 33599216 2661902 complement(230242..231507) 1 NC_002927.3 phenylacetate-CoA ligase 231507 2661902 BB0227 Bordetella bronchiseptica RB50 phenylacetate-CoA ligase NP_886776.1 230242 R 257310 CDS NP_886777.1 33599217 2661901 complement(231576..232406) 1 NC_002927.3 ABC transporter ATP-binding protein 232406 2661901 BB0228 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_886777.1 231576 R 257310 CDS NP_886778.1 33599218 2661665 complement(232468..233805) 1 NC_002927.3 hypothetical protein 233805 2661665 BB0229 Bordetella bronchiseptica RB50 hypothetical protein NP_886778.1 232468 R 257310 CDS NP_886779.1 33599219 2660177 complement(233918..234982) 1 NC_002927.3 branched-chain amino acid transport system permease 234982 2660177 BB0230 Bordetella bronchiseptica RB50 branched-chain amino acid transport system permease NP_886779.1 233918 R 257310 CDS NP_886780.1 33599220 2661908 complement(234993..235922) 1 NC_002927.3 branched-chain amino acid transport system permease 235922 2661908 BB0231 Bordetella bronchiseptica RB50 branched-chain amino acid transport system permease NP_886780.1 234993 R 257310 CDS NP_886781.1 33599221 2660128 complement(235933..236730) 1 NC_002927.3 high-affinity branched-chain amino acid transport ATP-binding protein 236730 2660128 BB0232 Bordetella bronchiseptica RB50 high-affinity branched-chain amino acid transport ATP-binding protein NP_886781.1 235933 R 257310 CDS NP_886782.1 33599222 2659754 complement(236734..238710) 1 NC_002927.3 AMP-binding protein 238710 2659754 BB0233 Bordetella bronchiseptica RB50 AMP-binding protein NP_886782.1 236734 R 257310 CDS NP_886783.1 33599223 2661741 238877..239587 1 NC_002927.3 cyclic nucleotide-binding protein 239587 2661741 BB0234 Bordetella bronchiseptica RB50 cyclic nucleotide-binding protein NP_886783.1 238877 D 257310 CDS NP_886784.1 33599224 2661770 complement(239594..240229) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0564; transporter 240229 2661770 BB0235 Bordetella bronchiseptica RB50 transporter NP_886784.1 239594 R 257310 CDS NP_886785.1 33599225 2661893 240359..241258 1 NC_002927.3 specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; chromosome replication initiation inhibitor protein 241258 2661893 BB0236 Bordetella bronchiseptica RB50 chromosome replication initiation inhibitor protein NP_886785.1 240359 D 257310 CDS NP_886786.1 33599226 2659241 241354..241845 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0562; hypothetical protein 241845 2659241 BB0237 Bordetella bronchiseptica RB50 hypothetical protein NP_886786.1 241354 D 257310 CDS NP_886787.1 33599227 2661786 complement(241892..242857) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0561; hypothetical protein 242857 2661786 BB0238 Bordetella bronchiseptica RB50 hypothetical protein NP_886787.1 241892 R 257310 CDS NP_886788.1 33599228 2661750 complement(243015..243767) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0560; hypothetical protein 243767 2661750 BB0239 Bordetella bronchiseptica RB50 hypothetical protein NP_886788.1 243015 R 257310 CDS NP_886789.1 33599229 2659275 243970..245211 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0559; aminotransferase 245211 2659275 BB0240 Bordetella bronchiseptica RB50 aminotransferase NP_886789.1 243970 D 257310 CDS NP_886790.1 33599230 2661925 245325..246341 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0558; amino acid ABC transporter substrate-binding protein 246341 2661925 BB0241 Bordetella bronchiseptica RB50 amino acid ABC transporter substrate-binding protein NP_886790.1 245325 D 257310 CDS NP_886791.1 33599231 2660242 complement(246376..246852) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0557; hypothetical protein 246852 2660242 BB0242 Bordetella bronchiseptica RB50 hypothetical protein NP_886791.1 246376 R 257310 CDS NP_886792.1 33599232 2661748 complement(246995..247903) 1 NC_002927.3 catalyzes the formation of acetoacetate and acetyl-CoA from 3-hydroxy-3-methylglutaryl-CoA; hydroxymethylglutaryl-CoA lyase 247903 hmgcL 2661748 hmgcL Bordetella bronchiseptica RB50 hydroxymethylglutaryl-CoA lyase NP_886792.1 246995 R 257310 CDS NP_886793.1 33599233 2661709 complement(248017..249129) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0555; hypothetical protein 249129 smf 2661709 smf Bordetella bronchiseptica RB50 hypothetical protein NP_886793.1 248017 R 257310 CDS NP_886794.1 33599234 2661745 complement(249230..249763) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0554; leucine-responsive regulatory protein 249763 lrp 2661745 lrp Bordetella bronchiseptica RB50 leucine-responsive regulatory protein NP_886794.1 249230 R 257310 CDS NP_886795.1 33599235 2661788 249852..251102 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0553; hypothetical protein 251102 2661788 BB0246 Bordetella bronchiseptica RB50 hypothetical protein NP_886795.1 249852 D 257310 CDS NP_886796.1 33599236 2660219 251204..251716 1 NC_002927.3 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 251716 def 2660219 def Bordetella bronchiseptica RB50 peptide deformylase NP_886796.1 251204 D 257310 CDS NP_886797.1 33599237 2659179 251782..252720 1 NC_002927.3 modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase 252720 fmt 2659179 fmt Bordetella bronchiseptica RB50 methionyl-tRNA formyltransferase NP_886797.1 251782 D 257310 CDS NP_886798.1 33599238 2661951 complement(252743..253369) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0550; hypothetical protein 253369 2661951 BB0249 Bordetella bronchiseptica RB50 hypothetical protein NP_886798.1 252743 R 257310 CDS NP_886799.1 33599239 2660180 complement(253366..254022) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0549; haloacid dehalogenase-like hydrolase 254022 2660180 BB0250 Bordetella bronchiseptica RB50 haloacid dehalogenase-like hydrolase NP_886799.1 253366 R 257310 CDS NP_886800.1 33599240 2661628 complement(254019..254621) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0548; hypothetical protein 254621 2661628 BB0251 Bordetella bronchiseptica RB50 hypothetical protein NP_886800.1 254019 R 257310 CDS NP_886801.1 33599241 2660101 complement(254628..255254) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0547; lysine decarboxylase 255254 2660101 BB0252 Bordetella bronchiseptica RB50 lysine decarboxylase NP_886801.1 254628 R 257310 CDS NP_886802.1 33599242 2660121 255396..255965 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0546; bacterioferritin 255965 2660121 BB0253 Bordetella bronchiseptica RB50 bacterioferritin NP_886802.1 255396 D 257310 CDS NP_886803.1 33599243 2661692 complement(256036..257355) 1 NC_002927.3 catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit; ribosomal protein S12 methylthiotransferase 257355 rimO 2661692 rimO Bordetella bronchiseptica RB50 ribosomal protein S12 methylthiotransferase NP_886803.1 256036 R 257310 CDS NP_886804.1 33599244 2660123 complement(257463..257654) 1 NC_002927.3 4-OT; member of subfamily 5; forms a dimer; the function in the Escherichia coli cell is unknown; 4-oxalocrotonate tautomerase 257654 2660123 BB0255 Bordetella bronchiseptica RB50 4-oxalocrotonate tautomerase NP_886804.1 257463 R 257310 CDS NP_886805.1 33599245 2661658 257906..259279 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0543; hypothetical protein 259279 2661658 BB0256 Bordetella bronchiseptica RB50 hypothetical protein NP_886805.1 257906 D 257310 CDS NP_886806.1 33599246 2661700 259350..260345 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0542; hypothetical protein 260345 2661700 BB0257 Bordetella bronchiseptica RB50 hypothetical protein NP_886806.1 259350 D 257310 CDS NP_886807.1 33599247 2661625 260430..261104 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0541; transcriptional regulator 261104 2661625 BB0258 Bordetella bronchiseptica RB50 transcriptional regulator NP_886807.1 260430 D 257310 CDS NP_886808.1 33599248 2660260 complement(261137..261985) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0566; dioxygenase 261985 2660260 BB0259 Bordetella bronchiseptica RB50 dioxygenase NP_886808.1 261137 R 257310 CDS NP_886809.1 33599249 2659356 262119..262895 1 NC_002927.3 catalyzes the formation of L-aspartate to iminoaspartate in NAD(+) biosynthesis; L-aspartate dehydrogenase 262895 2659356 BB0260 Bordetella bronchiseptica RB50 L-aspartate dehydrogenase NP_886809.1 262119 D 257310 CDS NP_886810.1 33599250 2660069 complement(262941..263570) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0568; amino acid efflux protein 263570 2660069 BB0261 Bordetella bronchiseptica RB50 amino acid efflux protein NP_886810.1 262941 R 257310 CDS NP_886811.1 33599251 2661716 263678..265012 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0569; hypothetical protein 265012 2661716 BB0262 Bordetella bronchiseptica RB50 hypothetical protein NP_886811.1 263678 D 257310 CDS NP_886812.1 33599252 2659229 265031..265642 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0570; hypothetical protein 265642 2659229 BB0263 Bordetella bronchiseptica RB50 hypothetical protein NP_886812.1 265031 D 257310 CDS NP_886813.1 33599253 2660210 265639..267948 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0571; two-component sensor kinase 267948 2660210 BB0264 Bordetella bronchiseptica RB50 two-component sensor kinase NP_886813.1 265639 D 257310 CDS NP_886814.1 33599254 2660285 267959..268648 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0572; two-component response regulator 268648 2660285 BB0265 Bordetella bronchiseptica RB50 two-component response regulator NP_886814.1 267959 D 257310 CDS NP_886815.1 33599255 2660175 268645..270024 1 NC_002927.3 involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; potassium transporter peripheral membrane protein 270024 trkA 2660175 trkA Bordetella bronchiseptica RB50 potassium transporter peripheral membrane protein NP_886815.1 268645 D 257310 CDS NP_886816.1 33599256 2660202 270073..271542 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0574; Trk system potassium uptake protein 271542 trkH 2660202 trkH Bordetella bronchiseptica RB50 Trk system potassium uptake protein NP_886816.1 270073 D 257310 CDS NP_886817.1 33599257 2660152 271622..272155 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0575; MarR family transcriptional regulator 272155 2660152 BB0268 Bordetella bronchiseptica RB50 MarR family transcriptional regulator NP_886817.1 271622 D 257310 CDS NP_886818.1 33599258 2661973 complement(272163..273158) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0576; hypothetical protein 273158 2661973 BB0269 Bordetella bronchiseptica RB50 hypothetical protein NP_886818.1 272163 R 257310 CDS NP_886819.1 33599259 2661690 273241..273891 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0577; hypothetical protein 273891 2661690 BB0270 Bordetella bronchiseptica RB50 hypothetical protein NP_886819.1 273241 D 257310 CDS NP_886820.1 33599260 2661664 274215..275177 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0578; hypothetical protein 275177 2661664 BB0271 Bordetella bronchiseptica RB50 hypothetical protein NP_886820.1 274215 D 257310 CDS NP_886821.1 33599261 2662841 275203..275955 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0579; maleate cis-trans isomerase 275955 maiA 2662841 maiA Bordetella bronchiseptica RB50 maleate cis-trans isomerase NP_886821.1 275203 D 257310 CDS NP_886822.1 33599262 2662852 275975..276796 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0580; alpha/beta hydrolase 276796 2662852 BB0273 Bordetella bronchiseptica RB50 alpha/beta hydrolase NP_886822.1 275975 D 257310 CDS NP_886823.1 33599263 2663445 276824..277855 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0581; hypothetical protein 277855 2663445 BB0274 Bordetella bronchiseptica RB50 hypothetical protein NP_886823.1 276824 D 257310 CDS NP_886824.1 33599264 2662937 277871..278488 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0582; isochorismatase 278488 2662937 BB0275 Bordetella bronchiseptica RB50 isochorismatase NP_886824.1 277871 D 257310 CDS NP_886825.1 33599265 2663392 complement(278605..279120) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0583; ring hydroxylating beta subunit 279120 2663392 BB0276 Bordetella bronchiseptica RB50 ring hydroxylating beta subunit NP_886825.1 278605 R 257310 CDS NP_886826.1 33599266 2663438 complement(279135..280424) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0584; ring hydroxylating alpha subunit 280424 2663438 BB0277 Bordetella bronchiseptica RB50 ring hydroxylating alpha subunit NP_886826.1 279135 R 257310 CDS NP_886827.1 33599267 2662914 complement(280460..281722) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0585; ferredoxin reductase 281722 2662914 BB0278 Bordetella bronchiseptica RB50 ferredoxin reductase NP_886827.1 280460 R 257310 CDS NP_886828.1 33599268 2662899 complement(281725..282036) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0586; ferredoxin 282036 2662899 BB0279 Bordetella bronchiseptica RB50 ferredoxin NP_886828.1 281725 R 257310 CDS NP_886829.1 33599269 2663370 282506..283609 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0589; hypothetical protein 283609 2663370 BB0280 Bordetella bronchiseptica RB50 hypothetical protein NP_886829.1 282506 D 257310 CDS NP_886830.1 33599270 2663288 283639..286017 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0590; oxidoreductase, large chain 286017 2663288 BB0281 Bordetella bronchiseptica RB50 oxidoreductase, large chain NP_886830.1 283639 D 257310 CDS NP_886831.1 33599271 2663356 286014..286850 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0591; oxidoreductase, medium chain 286850 2663356 BB0282 Bordetella bronchiseptica RB50 oxidoreductase, medium chain NP_886831.1 286014 D 257310 CDS NP_886832.1 33599272 2663836 286847..288034 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0592; iron-sulfur binding protein 288034 2663836 BB0283 Bordetella bronchiseptica RB50 iron-sulfur binding protein NP_886832.1 286847 D 257310 CDS NP_886833.1 33599273 2662978 288069..289100 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0593; hypothetical protein 289100 2662978 BB0284 Bordetella bronchiseptica RB50 hypothetical protein NP_886833.1 288069 D 257310 CDS NP_886834.1 33599274 2663613 289097..289885 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0594; ABC transporter ATP-binding protein 289885 2663613 BB0285 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_886834.1 289097 D 257310 CDS NP_886835.1 33599275 2662782 289882..290421 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0595; ABC transporter permease 290421 2662782 BB0286 Bordetella bronchiseptica RB50 ABC transporter permease NP_886835.1 289882 D 257310 CDS NP_886836.1 33599276 2663870 290461..291090 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0596; hypothetical protein 291090 2663870 BB0287 Bordetella bronchiseptica RB50 hypothetical protein NP_886836.1 290461 D 257310 CDS NP_886837.1 33599277 2663119 291093..292751 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0597; hypothetical protein 292751 2663119 BB0288 Bordetella bronchiseptica RB50 hypothetical protein NP_886837.1 291093 D 257310 CDS NP_886838.1 33599278 2663861 293100..294341 1 NC_002927.3 ATP-dependent; carboxylate-amine ligase with weak glutamate--cysteine ligase activity; carboxylate-amine ligase 294341 2663861 BB0289 Bordetella bronchiseptica RB50 carboxylate-amine ligase NP_886838.1 293100 D 257310 CDS NP_886839.1 33599279 2663367 complement(294357..295391) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0599; hypothetical protein 295391 2663367 BB0290 Bordetella bronchiseptica RB50 hypothetical protein NP_886839.1 294357 R 257310 CDS NP_886840.1 33599280 2663206 295488..296102 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0600; hypothetical protein 296102 2663206 BB0291 Bordetella bronchiseptica RB50 hypothetical protein NP_886840.1 295488 D 257310 CDS NP_886841.1 33599281 2663340 296129..296647 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0601; rRNA methylase 296647 2663340 BB0292 Bordetella bronchiseptica RB50 rRNA methylase NP_886841.1 296129 D 257310 CDS NP_886842.1 33599282 2663401 complement(296666..297661) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0602; hypothetical protein 297661 2663401 BB0293 Bordetella bronchiseptica RB50 hypothetical protein NP_886842.1 296666 R 257310 CDS NP_886843.1 33599283 2662718 complement(297716..298771) 1 NC_002927.3 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 298771 gpsA 2662718 gpsA Bordetella bronchiseptica RB50 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase NP_886843.1 297716 R 257310 CDS NP_886844.1 33599284 2663856 complement(298787..299314) 1 NC_002927.3 molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB 299314 secB 2663856 secB Bordetella bronchiseptica RB50 preprotein translocase subunit SecB NP_886844.1 298787 R 257310 CDS NP_886845.1 33599285 2663280 complement(299368..299661) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0605; glutaredoxin 3 299661 grxC 2663280 grxC Bordetella bronchiseptica RB50 glutaredoxin 3 NP_886845.1 299368 R 257310 CDS NP_886846.1 33599286 2663419 complement(299662..300012) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0606; hypothetical protein 300012 2663419 BB0297 Bordetella bronchiseptica RB50 hypothetical protein NP_886846.1 299662 R 257310 CDS NP_886847.1 33599287 2663301 300237..300989 1 NC_002927.3 2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase 300989 gpmA 2663301 gpmA Bordetella bronchiseptica RB50 phosphoglyceromutase NP_886847.1 300237 D 257310 CDS NP_886848.1 33599288 2663807 300993..302558 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0608; peptidase 302558 2663807 BB0299 Bordetella bronchiseptica RB50 peptidase NP_886848.1 300993 D 257310 CDS NP_886849.1 33599289 2663147 302579..304030 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0609; carboxy-terminal processing protease precursor 304030 ctpA 2663147 ctpA Bordetella bronchiseptica RB50 carboxy-terminal processing protease precursor NP_886849.1 302579 D 257310 CDS NP_886850.1 33599290 2663076 304027..304821 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0610; adenylyltransferase 304821 thiF 2663076 thiF Bordetella bronchiseptica RB50 adenylyltransferase NP_886850.1 304027 D 257310 CDS NP_886851.1 33599291 2662762 304958..305653 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0209; GntR family transcriptional regulator 305653 2662762 BB0302 Bordetella bronchiseptica RB50 GntR family transcriptional regulator NP_886851.1 304958 D 257310 CDS NP_886852.1 33599292 2663032 305670..307082 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0208; oxidoreductase 307082 2663032 BB0303 Bordetella bronchiseptica RB50 oxidoreductase NP_886852.1 305670 D 257310 CDS NP_886853.1 33599293 2663802 complement(307181..309094) 1 NC_002927.3 required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 309094 thiC 2663802 thiC Bordetella bronchiseptica RB50 thiamine biosynthesis protein ThiC NP_886853.1 307181 R 257310 CDS NP_886854.1 33599294 2663830 309413..309979 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0205; lipoprotein 309979 2663830 BB0305 Bordetella bronchiseptica RB50 lipoprotein NP_886854.1 309413 D 257310 CDS NP_886855.1 33599295 2663096 310070..311059 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0204; restriction endonuclease 311059 2663096 BB0306 Bordetella bronchiseptica RB50 restriction endonuclease NP_886855.1 310070 D 257310 CDS NP_886856.1 33599296 2663059 complement(311072..313267) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0740; DNA methylase 313267 2663059 BB0307 Bordetella bronchiseptica RB50 DNA methylase NP_886856.1 311072 R 257310 CDS NP_886857.1 33599297 2663061 complement(313340..313747) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0741; transcriptional regulator 313747 2663061 BB0308 Bordetella bronchiseptica RB50 transcriptional regulator NP_886857.1 313340 R 257310 CDS NP_886858.1 33599298 2663673 complement(313887..314330) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0744; transcriptional regulator 314330 2663673 BB0309 Bordetella bronchiseptica RB50 transcriptional regulator NP_886858.1 313887 R 257310 CDS NP_886859.1 33599299 2663751 314393..315187 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0745; transcriptional regulator 315187 2663751 BB0310 Bordetella bronchiseptica RB50 transcriptional regulator NP_886859.1 314393 D 257310 CDS NP_886860.1 33599300 2663808 complement(315353..316489) 1 NC_002927.3 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 316489 proB 2663808 proB Bordetella bronchiseptica RB50 gamma-glutamyl kinase NP_886860.1 315353 R 257310 CDS NP_886861.1 33599301 2662363 complement(316560..317693) 1 NC_002927.3 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 317693 obgE 2662363 obgE Bordetella bronchiseptica RB50 GTPase ObgE NP_886861.1 316560 R 257310 CDS NP_886862.1 33599302 2662281 complement(317843..318103) 1 NC_002927.3 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 318103 rpmA 2662281 rpmA Bordetella bronchiseptica RB50 50S ribosomal protein L27 NP_886862.1 317843 R 257310 CDS NP_886863.1 33599303 2662076 complement(318137..318448) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0749; 50S ribosomal protein L21 318448 rplU 2662076 rplU Bordetella bronchiseptica RB50 50S ribosomal protein L21 NP_886863.1 318137 R 257310 CDS NP_886864.1 33599304 2661929 318873..320021 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0750; hypothetical protein 320021 2661929 BB0315 Bordetella bronchiseptica RB50 hypothetical protein NP_886864.1 318873 D 257310 CDS NP_886865.1 33599305 2661633 320136..321101 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0751; octaprenyl-diphosphate synthase 321101 ispB 2661633 ispB Bordetella bronchiseptica RB50 octaprenyl-diphosphate synthase NP_886865.1 320136 D 257310 CDS NP_886866.1 33599306 2659246 complement(321369..322241) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0752; LysR family transcriptional regulator 322241 2659246 BB0317 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_886866.1 321369 R 257310 CDS NP_886867.1 33599307 2662412 322411..324459 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0753; hydantoin utilization protein A 324459 hyuA 2662412 hyuA Bordetella bronchiseptica RB50 hydantoin utilization protein A NP_886867.1 322411 D 257310 CDS NP_886868.1 33599308 2660311 324477..326474 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0754; hydantoin utilization protein B 326474 hyuB 2660311 hyuB Bordetella bronchiseptica RB50 hydantoin utilization protein B NP_886868.1 324477 D 257310 CDS NP_886869.1 33599309 2662452 326509..327846 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0755; amino acid deaminase 327846 2662452 BB0320 Bordetella bronchiseptica RB50 amino acid deaminase NP_886869.1 326509 D 257310 CDS NP_886870.1 33599310 2659655 327843..328913 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0756; hypothetical protein 328913 2659655 BB0321 Bordetella bronchiseptica RB50 hypothetical protein NP_886870.1 327843 D 257310 CDS NP_886871.1 33599311 2661164 328968..330449 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0757; succinate-semialdehyde dehydrogenase 330449 gabD 2661164 gabD Bordetella bronchiseptica RB50 succinate-semialdehyde dehydrogenase NP_886871.1 328968 D 257310 CDS NP_886872.1 33599312 2661810 complement(330465..331052) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0758; cyclolysin-activating lysine-acyltransferase 331052 cyaC 2661810 cyaC Bordetella bronchiseptica RB50 cyclolysin-activating lysine-acyltransferase NP_886872.1 330465 R 257310 CDS NP_886873.1 33599313 2661688 331400..336622 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0760; bifunctional hemolysin-adenylate cyclase 336622 cyaA 2661688 cyaA Bordetella bronchiseptica RB50 bifunctional hemolysin-adenylate cyclase NP_886873.1 331400 D 257310 CDS NP_886874.1 33599314 2662479 336629..338836 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0761; cyclolysin secretion ATP-binding protein 338836 cyaB 2662479 cyaB Bordetella bronchiseptica RB50 cyclolysin secretion ATP-binding protein NP_886874.1 336629 D 257310 CDS NP_886875.1 33599315 2663640 338833..340155 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0762; cyclolysin secretion protein 340155 cyaD 2663640 cyaD Bordetella bronchiseptica RB50 cyclolysin secretion protein NP_886875.1 338833 D 257310 CDS NP_886876.1 33599316 2663023 340157..341581 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0763; cyclolysin secretion protein 341581 cyaE 2663023 cyaE Bordetella bronchiseptica RB50 cyclolysin secretion protein NP_886876.1 340157 D 257310 CDS NP_886877.1 33599317 2663178 341672..342580 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0764; LysR family transcriptional regulator 342580 cyaX 2663178 cyaX Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_886877.1 341672 D 257310 CDS NP_886878.1 33599318 2663238 342645..343559 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0765; glutamate/aspartate ABC transporter substrate-binding protein 343559 2663238 BB0329 Bordetella bronchiseptica RB50 glutamate/aspartate ABC transporter substrate-binding protein NP_886878.1 342645 D 257310 CDS NP_886879.1 33599319 2663325 343643..344401 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0766; glutamate/aspartate transport system permease 344401 gltJ 2663325 gltJ Bordetella bronchiseptica RB50 glutamate/aspartate transport system permease NP_886879.1 343643 D 257310 CDS NP_886880.1 33599320 2663710 344398..345081 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0767; glutamate/aspartate transport system permease 345081 gltK 2663710 gltK Bordetella bronchiseptica RB50 glutamate/aspartate transport system permease NP_886880.1 344398 D 257310 CDS NP_886881.1 33599321 2663158 345098..345841 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0768; glutamate/aspartate transport ATP-binding protein 345841 gltL 2663158 gltL Bordetella bronchiseptica RB50 glutamate/aspartate transport ATP-binding protein NP_886881.1 345098 D 257310 CDS NP_886882.1 33599322 2663163 345871..346731 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0769; aminotransferase 346731 2663163 BB0333 Bordetella bronchiseptica RB50 aminotransferase NP_886882.1 345871 D 257310 CDS NP_886883.1 33599323 2663626 complement(346739..347305) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0770; hypothetical protein 347305 2663626 BB0334 Bordetella bronchiseptica RB50 hypothetical protein NP_886883.1 346739 R 257310 CDS NP_886884.1 33599324 2662966 complement(347394..348350) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0771; hypothetical protein 348350 2662966 BB0335 Bordetella bronchiseptica RB50 hypothetical protein NP_886884.1 347394 R 257310 CDS NP_886885.1 33599325 2662871 complement(348395..349147) 1 NC_002927.3 catalyzes the conversion of 3-hydroxyacyl-CoA to 3-oxyacyl-CoA; acetoacetyl-CoA reductase 349147 fabG 2662871 fabG Bordetella bronchiseptica RB50 acetoacetyl-CoA reductase NP_886885.1 348395 R 257310 CDS NP_886886.1 33599326 2662850 complement(349144..350889) 1 NC_002927.3 catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; catalytic; acetolactate synthase catalytic subunit 350889 2662850 BB0337 Bordetella bronchiseptica RB50 acetolactate synthase catalytic subunit NP_886886.1 349144 R 257310 CDS NP_886887.1 33599327 2662791 350974..351708 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0774; GntR family transcriptional regulator 351708 2662791 BB0338 Bordetella bronchiseptica RB50 GntR family transcriptional regulator NP_886887.1 350974 D 257310 CDS NP_886888.1 33599328 2662863 complement(351716..351895) 1 NC_002927.3 hypothetical protein 351895 2662863 BB0339 Bordetella bronchiseptica RB50 hypothetical protein NP_886888.1 351716 R 257310 CDS NP_886889.1 33599329 2663221 352042..353064 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0775; hypothetical protein 353064 2663221 BB0340 Bordetella bronchiseptica RB50 hypothetical protein NP_886889.1 352042 D 257310 CDS NP_886890.1 33599330 2663466 complement(353076..353798) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0776; GntR family transcriptional regulator 353798 2663466 BB0341 Bordetella bronchiseptica RB50 GntR family transcriptional regulator NP_886890.1 353076 R 257310 CDS NP_886891.1 33599331 2663048 complement(353943..354950) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0777; Zinc-binding dehydrogenase 354950 2663048 BB0342 Bordetella bronchiseptica RB50 Zinc-binding dehydrogenase NP_886891.1 353943 R 257310 CDS NP_886892.1 33599332 2663227 complement(354991..356541) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0778; acetyl-CoA synthetase 356541 2663227 BB0343 Bordetella bronchiseptica RB50 acetyl-CoA synthetase NP_886892.1 354991 R 257310 CDS NP_886893.1 33599333 2663192 complement(356538..357656) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0779; hypothetical protein 357656 2663192 BB0344 Bordetella bronchiseptica RB50 hypothetical protein NP_886893.1 356538 R 257310 CDS NP_886894.1 33599334 2663305 complement(357653..358435) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0780; hypothetical protein 358435 2663305 BB0345 Bordetella bronchiseptica RB50 hypothetical protein NP_886894.1 357653 R 257310 CDS NP_886895.1 33599335 2663155 complement(358447..359310) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0781; ABC transporter ATP-binding protein 359310 2663155 BB0346 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_886895.1 358447 R 257310 CDS NP_886896.1 33599336 2663612 complement(359329..360426) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0782; hypothetical protein 360426 2663612 BB0347 Bordetella bronchiseptica RB50 hypothetical protein NP_886896.1 359329 R 257310 CDS NP_886897.1 33599337 2662891 complement(360495..361421) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0783; dioxygenase 361421 2662891 BB0348 Bordetella bronchiseptica RB50 dioxygenase NP_886897.1 360495 R 257310 CDS NP_886898.1 33599338 2663659 complement(361456..363150) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0784; acetolactate synthase large subunit 363150 ilvB 2663659 ilvB Bordetella bronchiseptica RB50 acetolactate synthase large subunit NP_886898.1 361456 R 257310 CDS NP_886899.1 33599339 2662946 complement(363350..364243) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0785; mechanosensitive channel protein 364243 2662946 BB0350 Bordetella bronchiseptica RB50 mechanosensitive channel protein NP_886899.1 363350 R 257310 CDS NP_886900.1 33599340 2663374 complement(364391..365302) 1 NC_002927.3 LysR family transcriptional regulator 365302 2663374 BB0351 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_886900.1 364391 R 257310 CDS NP_886901.1 33599341 2662859 365420..366601 1 NC_002927.3 CAIB/BAIF family protein 366601 2662859 BB0352 Bordetella bronchiseptica RB50 CAIB/BAIF family protein NP_886901.1 365420 D 257310 CDS NP_886902.1 33599342 2663249 366598..367428 1 NC_002927.3 hypothetical protein 367428 2663249 BB0353 Bordetella bronchiseptica RB50 hypothetical protein NP_886902.1 366598 D 257310 CDS NP_886903.1 33599343 2663282 complement(367441..368232) 1 NC_002927.3 GntR family transcriptional regulator 368232 2663282 BB0354 Bordetella bronchiseptica RB50 GntR family transcriptional regulator NP_886903.1 367441 R 257310 CDS NP_886904.1 33599344 2662942 complement(368234..368797) 1 NC_002927.3 hypothetical protein 368797 2662942 BB0355 Bordetella bronchiseptica RB50 hypothetical protein NP_886904.1 368234 R 257310 CDS NP_886905.1 33599345 2663148 complement(368807..369649) 1 NC_002927.3 Catalyzes the reversible hydration of fumaric acid to yield I-malic acid; fumarate hydratase 369649 2663148 BB0356 Bordetella bronchiseptica RB50 fumarate hydratase NP_886905.1 368807 R 257310 CDS NP_886906.1 33599346 2662975 complement(369715..370689) 1 NC_002927.3 hypothetical protein 370689 2662975 BB0357 Bordetella bronchiseptica RB50 hypothetical protein NP_886906.1 369715 R 257310 CDS NP_886907.1 33599347 2663321 complement(370947..371918) 1 NC_002927.3 hypothetical protein 371918 2663321 BB0358 Bordetella bronchiseptica RB50 hypothetical protein NP_886907.1 370947 R 257310 CDS NP_886908.1 33599348 2663173 complement(371969..373858) 1 NC_002927.3 hypothetical protein 373858 2663173 BB0359 Bordetella bronchiseptica RB50 hypothetical protein NP_886908.1 371969 R 257310 CDS NP_886909.1 33599349 2663169 373942..374751 1 NC_002927.3 transcriptional regulator 374751 2663169 BB0360 Bordetella bronchiseptica RB50 transcriptional regulator NP_886909.1 373942 D 257310 CDS NP_886910.1 33599350 2663235 complement(374789..375427) 1 NC_002927.3 succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B protein 375427 scoB 2663235 scoB Bordetella bronchiseptica RB50 succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B protein NP_886910.1 374789 R 257310 CDS NP_886911.1 33599351 2663548 complement(375441..376145) 1 NC_002927.3 succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A 376145 scoA 2663548 scoA Bordetella bronchiseptica RB50 succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A NP_886911.1 375441 R 257310 CDS NP_886912.1 33599352 2662913 complement(376292..377236) 1 NC_002927.3 LysR family transcriptional regulator 377236 2662913 BB0363 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_886912.1 376292 R 257310 CDS NP_886913.1 33599353 2662973 377390..378205 1 NC_002927.3 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 378205 2662973 BB0364 Bordetella bronchiseptica RB50 enoyl-CoA hydratase NP_886913.1 377390 D 257310 CDS NP_886914.1 33599354 2663876 378220..379110 1 NC_002927.3 hypothetical protein 379110 2663876 BB0365 Bordetella bronchiseptica RB50 hypothetical protein NP_886914.1 378220 D 257310 CDS NP_886915.1 33599355 2663196 379200..380408 1 NC_002927.3 hypothetical protein 380408 2663196 BB0366 Bordetella bronchiseptica RB50 hypothetical protein NP_886915.1 379200 D 257310 CDS NP_886916.1 33599356 2663655 380444..381319 1 NC_002927.3 branched-chain amino acid transport system permease 381319 2663655 BB0367 Bordetella bronchiseptica RB50 branched-chain amino acid transport system permease NP_886916.1 380444 D 257310 CDS NP_886917.1 33599357 2663019 381312..382256 1 NC_002927.3 branched-chain amino acid transport system permease 382256 2663019 BB0368 Bordetella bronchiseptica RB50 branched-chain amino acid transport system permease NP_886917.1 381312 D 257310 CDS NP_886918.1 33599358 2663185 382265..382999 1 NC_002927.3 ABC transporter ATP-binding protein 382999 2663185 BB0369 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_886918.1 382265 D 257310 CDS NP_886919.1 33599359 2663712 382989..383711 1 NC_002927.3 ABC transporter ATP-binding protein 383711 2663712 BB0370 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_886919.1 382989 D 257310 CDS NP_886920.1 33599360 2662983 383760..384521 1 NC_002927.3 short chain dehydrogenase 384521 2662983 BB0371 Bordetella bronchiseptica RB50 short chain dehydrogenase NP_886920.1 383760 D 257310 CDS NP_886921.1 33599361 2662783 384539..384829 1 NC_002927.3 hypothetical protein 384829 2662783 BB0372 Bordetella bronchiseptica RB50 hypothetical protein NP_886921.1 384539 D 257310 CDS NP_886922.1 33599362 2663047 384864..385646 1 NC_002927.3 short chain dehydrogenase 385646 2663047 BB0373 Bordetella bronchiseptica RB50 short chain dehydrogenase NP_886922.1 384864 D 257310 CDS NP_886923.1 33599363 2663794 385662..386813 1 NC_002927.3 NADH:flavin oxidoreductase / NADH oxidase family protein 386813 2663794 BB0374 Bordetella bronchiseptica RB50 NADH:flavin oxidoreductase / NADH oxidase family protein NP_886923.1 385662 D 257310 CDS NP_886924.1 33599364 2662793 387063..387818 1 NC_002927.3 hypothetical protein 387818 2662793 BB0375 Bordetella bronchiseptica RB50 hypothetical protein NP_886924.1 387063 D 257310 CDS NP_886925.1 33599365 2663161 388153..388602 1 NC_002927.3 hypothetical protein 388602 2663161 BB0376 Bordetella bronchiseptica RB50 hypothetical protein NP_886925.1 388153 D 257310 CDS NP_886926.1 33599366 2663628 388615..390132 1 NC_002927.3 hypothetical protein 390132 2663628 BB0377 Bordetella bronchiseptica RB50 hypothetical protein NP_886926.1 388615 D 257310 CDS NP_886927.1 33599367 2663885 complement(390213..391586) 1 NC_002927.3 sensor kinase 391586 2663885 BB0378 Bordetella bronchiseptica RB50 sensor kinase NP_886927.1 390213 R 257310 CDS NP_886928.1 33599368 2662586 complement(391583..392296) 1 NC_002927.3 transcriptional regulatory protein 392296 2662586 BB0379 Bordetella bronchiseptica RB50 transcriptional regulatory protein NP_886928.1 391583 R 257310 CDS NP_886929.1 33599369 2663570 392776..392991 1 NC_002927.3 Similar to Ralstonia solanacearum hypothetical protein Rsc2574 or Rs00781 SWALL:Q8XWA1 (EMBL:AL646070) (80 aa) fasta scores: E(): 0.016, 44.06% id in 59 aa; hypothetical protein 392991 2663570 BB0380 Bordetella bronchiseptica RB50 hypothetical protein NP_886929.1 392776 D 257310 CDS NP_886930.1 33599370 2663569 393007..393891 1 NC_002927.3 Weakly similar to Bacillus thuringiensis hypothetical protein Pbt074 SWALL:CAD30119 (EMBL:AL731825) (349 aa) fasta scores: E(): 0.058, 25.98% id in 304 aa; hypothetical protein 393891 2663569 BB0381 Bordetella bronchiseptica RB50 hypothetical protein NP_886930.1 393007 D 257310 CDS NP_886931.1 33599371 2662877 complement(393868..394755) 1 NC_002927.3 Weakly similar to Halobacterium sp. Orf H1617 Vng6088C SWALL:O54575 (EMBL:AF016485) (276 aa) fasta scores: E(): 0.56, 23.44% id in 290 aa; hypothetical protein 394755 2662877 BB0382 Bordetella bronchiseptica RB50 hypothetical protein NP_886931.1 393868 R 257310 CDS NP_886932.1 33599372 2663607 395820..397094 1 NC_002927.3 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 397094 hemA 2663607 hemA Bordetella bronchiseptica RB50 glutamyl-tRNA reductase NP_886932.1 395820 D 257310 CDS NP_886933.1 33599373 2662758 397181..398263 1 NC_002927.3 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 398263 prfA 2662758 prfA Bordetella bronchiseptica RB50 peptide chain release factor 1 NP_886933.1 397181 D 257310 CDS NP_886934.1 33599374 2663136 398331..399086 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0679; heme biosynthesis protein 399086 hemK 2663136 hemK Bordetella bronchiseptica RB50 heme biosynthesis protein NP_886934.1 398331 D 257310 CDS NP_886935.1 33599375 2663541 399124..399450 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0680; hypothetical protein 399450 2663541 BB0386 Bordetella bronchiseptica RB50 hypothetical protein NP_886935.1 399124 D 257310 CDS NP_886936.1 33599376 2663683 399455..400015 1 NC_002927.3 catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 400015 2663683 BB0387 Bordetella bronchiseptica RB50 3-octaprenyl-4-hydroxybenzoate carboxy-lyase NP_886936.1 399455 D 257310 CDS NP_886937.1 33599377 2663197 400257..401249 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0682; hypothetical protein 401249 2663197 BB0388 Bordetella bronchiseptica RB50 hypothetical protein NP_886937.1 400257 D 257310 CDS NP_886938.1 33599378 2663276 401268..402263 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0683; 4,5-dihydroxyphthalate decarboxylase 402263 2663276 BB0389 Bordetella bronchiseptica RB50 4,5-dihydroxyphthalate decarboxylase NP_886938.1 401268 D 257310 CDS NP_886939.1 33599379 2663887 402279..403148 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0684; molybdopterin dehydrogenase 403148 2663887 BB0390 Bordetella bronchiseptica RB50 molybdopterin dehydrogenase NP_886939.1 402279 D 257310 CDS NP_886940.1 33599380 2663146 403145..403654 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0684A; 2Fe-2S ferredoxin 403654 2663146 BB0391 Bordetella bronchiseptica RB50 2Fe-2S ferredoxin NP_886940.1 403145 D 257310 CDS NP_886941.1 33599381 2662869 403647..406028 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0685; dehydrogenase/oxidase 406028 2662869 BB0392 Bordetella bronchiseptica RB50 dehydrogenase/oxidase NP_886941.1 403647 D 257310 CDS NP_886942.1 33599382 2663116 406072..406791 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0686; hypothetical protein 406791 2663116 BB0393 Bordetella bronchiseptica RB50 hypothetical protein NP_886942.1 406072 D 257310 CDS NP_886943.1 33599383 2663351 complement(406967..408040) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3435; hypothetical protein 408040 2663351 BB0394 Bordetella bronchiseptica RB50 hypothetical protein NP_886943.1 406967 R 257310 CDS NP_886944.1 33599384 2662901 408208..409002 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3434; hypothetical protein 409002 2662901 BB0395 Bordetella bronchiseptica RB50 hypothetical protein NP_886944.1 408208 D 257310 CDS NP_886945.1 33599385 2663141 complement(409042..409566) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3433; hypothetical protein 409566 2663141 BB0396 Bordetella bronchiseptica RB50 hypothetical protein NP_886945.1 409042 R 257310 CDS NP_886946.1 33599386 2663273 complement(409559..411301) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3432; sulfite reductase 411301 cysI 2663273 cysI Bordetella bronchiseptica RB50 sulfite reductase NP_886946.1 409559 R 257310 CDS NP_886947.1 33599387 2663427 411642..412187 1 NC_002927.3 hypothetical protein 412187 2663427 BB0398 Bordetella bronchiseptica RB50 hypothetical protein NP_886947.1 411642 D 257310 CDS NP_886948.1 33599388 2663639 complement(412336..413094) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3431; branched-chain amino acid transport ATP-binding ABC transporter 413094 2663639 BB0399 Bordetella bronchiseptica RB50 branched-chain amino acid transport ATP-binding ABC transporter NP_886948.1 412336 R 257310 CDS NP_886949.1 33599389 2663484 complement(413097..413804) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3430; branched-chain amino acid transport ATP-binding ABC transporter 413804 2663484 BB0400 Bordetella bronchiseptica RB50 branched-chain amino acid transport ATP-binding ABC transporter NP_886949.1 413097 R 257310 CDS NP_886950.1 33599390 2663255 complement(413821..414702) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3429; branched-chain amino acid transport permease 414702 2663255 BB0401 Bordetella bronchiseptica RB50 branched-chain amino acid transport permease NP_886950.1 413821 R 257310 CDS NP_886951.1 33599391 2662965 complement(414713..415702) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3428; branched-chain amino acid transport permease 415702 2662965 BB0402 Bordetella bronchiseptica RB50 branched-chain amino acid transport permease NP_886951.1 414713 R 257310 CDS NP_886952.1 33599392 2663333 complement(415805..416722) 1 NC_002927.3 LysR family transcriptional regulator 416722 2663333 BB0403 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_886952.1 415805 R 257310 CDS NP_886953.1 33599393 2663212 416844..418076 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3427; branched-chain amino acid binding protein 418076 2663212 BB0404 Bordetella bronchiseptica RB50 branched-chain amino acid binding protein NP_886953.1 416844 D 257310 CDS NP_886954.1 33599394 2663144 418146..419564 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3426; amidase 419564 2663144 BB0405 Bordetella bronchiseptica RB50 amidase NP_886954.1 418146 D 257310 CDS NP_886955.1 33599395 2663447 complement(419586..420236) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3425; carbonic anhydrase 420236 2663447 BB0406 Bordetella bronchiseptica RB50 carbonic anhydrase NP_886955.1 419586 R 257310 CDS NP_886956.1 33599396 2663483 complement(420370..420714) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3424; hypothetical protein 420714 2663483 BB0407 Bordetella bronchiseptica RB50 hypothetical protein NP_886956.1 420370 R 257310 CDS NP_886957.1 33599397 2663113 420954..421277 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0227; phosphate starvation-inducible protein precursor 421277 psiF 2663113 psiF Bordetella bronchiseptica RB50 phosphate starvation-inducible protein precursor NP_886957.1 420954 D 257310 CDS NP_886958.1 33599398 2663177 complement(421395..422444) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0226; hypothetical protein 422444 2663177 BB0409 Bordetella bronchiseptica RB50 hypothetical protein NP_886958.1 421395 R 257310 CDS NP_886959.1 33599399 2663867 complement(422441..423265) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0225; 3-oxoadipate enol-lactone hydrolase 423265 catD2 2663867 catD2 Bordetella bronchiseptica RB50 3-oxoadipate enol-lactone hydrolase NP_886959.1 422441 R 257310 CDS NP_886960.1 33599400 2663724 complement(423266..423562) 1 NC_002927.3 unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity; YciI-like protein 423562 2663724 BB0411 Bordetella bronchiseptica RB50 YciI-like protein NP_886960.1 423266 R 257310 CDS NP_886961.1 33599401 2663507 complement(423588..423863) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0223; methylmuconolactone isomerase 423863 catC2 2663507 catC2 Bordetella bronchiseptica RB50 methylmuconolactone isomerase NP_886961.1 423588 R 257310 CDS NP_886962.1 33599402 2663104 complement(423920..424564) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0222; 3-oxoadipate CoA-transferase subunit B 424564 catJ 2663104 catJ Bordetella bronchiseptica RB50 3-oxoadipate CoA-transferase subunit B NP_886962.1 423920 R 257310 CDS NP_886963.1 33599403 2663535 complement(424564..425184) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0221; 3-oxoadipate CoA-transferase subunit A 425184 catI 2663535 catI Bordetella bronchiseptica RB50 3-oxoadipate CoA-transferase subunit A NP_886963.1 424564 R 257310 CDS NP_886964.1 33599404 2663069 425380..426231 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0220; transcriptional regulator 426231 2663069 BB0415 Bordetella bronchiseptica RB50 transcriptional regulator NP_886964.1 425380 D 257310 CDS NP_886965.1 33599405 2663702 complement(426282..427007) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0219; short-chain dehydrogenase 427007 2663702 BB0416 Bordetella bronchiseptica RB50 short-chain dehydrogenase NP_886965.1 426282 R 257310 CDS NP_886966.1 33599406 2663512 complement(427040..428473) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0218; short-chain fatty acids transporter 428473 2663512 BB0417 Bordetella bronchiseptica RB50 short-chain fatty acids transporter NP_886966.1 427040 R 257310 CDS NP_886967.1 33599407 2663129 complement(428493..429425) 1 NC_002927.3 converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA; 3-hydroxybutyryl-CoA dehydrogenase 429425 2663129 BB0418 Bordetella bronchiseptica RB50 3-hydroxybutyryl-CoA dehydrogenase NP_886967.1 428493 R 257310 CDS NP_886968.1 33599408 2663764 complement(429824..432619) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0216; autotransporter subtilisin-like protease 432619 sphB1 2663764 sphB1 Bordetella bronchiseptica RB50 autotransporter subtilisin-like protease NP_886968.1 429824 R 257310 CDS NP_886969.1 33599409 2663386 complement(433213..436161) 1 NC_002927.3 catalyzes the formation of oxaloacetate from phosphoenolpyruvate; phosphoenolpyruvate carboxylase 436161 ppc 2663386 ppc Bordetella bronchiseptica RB50 phosphoenolpyruvate carboxylase NP_886969.1 433213 R 257310 CDS NP_886970.1 33599410 2663579 436218..436952 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0214; hypothetical protein 436952 2663579 BB0421 Bordetella bronchiseptica RB50 hypothetical protein NP_886970.1 436218 D 257310 CDS NP_886971.1 33599411 2663597 complement(436991..437539) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0213; acetyltransferase 437539 2663597 BB0422 Bordetella bronchiseptica RB50 acetyltransferase NP_886971.1 436991 R 257310 CDS NP_886972.1 33599412 2663742 437694..438593 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0212; hydrolase 438593 2663742 BB0423 Bordetella bronchiseptica RB50 hydrolase NP_886972.1 437694 D 257310 CDS NP_886973.1 33599413 2663770 complement(438618..439244) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0282; regulatory protein 439244 2663770 BB0424 Bordetella bronchiseptica RB50 regulatory protein NP_886973.1 438618 R 257310 CDS NP_886974.1 33599414 2663775 complement(439267..440193) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0283; 2-hydroxyacid dehydrogenase 440193 2663775 BB0425 Bordetella bronchiseptica RB50 2-hydroxyacid dehydrogenase NP_886974.1 439267 R 257310 CDS NP_886975.1 33599415 2662928 complement(440202..441788) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0284; peptide ABC transporter substrate-binding protein 441788 2662928 BB0426 Bordetella bronchiseptica RB50 peptide ABC transporter substrate-binding protein NP_886975.1 440202 R 257310 CDS NP_886976.1 33599416 2663067 complement(441785..442825) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0285; acetyl esterase 442825 2663067 BB0427 Bordetella bronchiseptica RB50 acetyl esterase NP_886976.1 441785 R 257310 CDS NP_886977.1 33599417 2663046 442990..443850 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0286; transcriptional regulator 443850 2663046 BB0428 Bordetella bronchiseptica RB50 transcriptional regulator NP_886977.1 442990 D 257310 CDS NP_886978.1 33599418 2663600 complement(443882..444883) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0287; hypothetical protein 444883 leuA 2663600 leuA Bordetella bronchiseptica RB50 hypothetical protein NP_886978.1 443882 R 257310 CDS NP_886979.1 33599419 2663577 444954..445763 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0288; transcriptional regulator 445763 2663577 BB0430 Bordetella bronchiseptica RB50 transcriptional regulator NP_886979.1 444954 D 257310 CDS NP_886980.1 33599420 2663573 445841..447700 1 NC_002927.3 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 447700 ilvD 2663573 ilvD Bordetella bronchiseptica RB50 dihydroxy-acid dehydratase NP_886980.1 445841 D 257310 CDS NP_886981.1 33599421 2663750 complement(447760..449097) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0292; hypothetical protein 449097 2663750 BB0432 Bordetella bronchiseptica RB50 hypothetical protein NP_886981.1 447760 R 257310 CDS NP_886982.1 33599422 2663571 complement(449227..449787) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0294; 5'(3')-deoxyribonucleotidase 449787 2663571 BB0433 Bordetella bronchiseptica RB50 5'(3')-deoxyribonucleotidase NP_886982.1 449227 R 257310 CDS NP_886983.1 33599423 2663816 complement(449847..450434) 1 NC_002927.3 2'-5' RNA ligase 450434 2663816 BB0434 Bordetella bronchiseptica RB50 2'-5' RNA ligase NP_886983.1 449847 R 257310 CDS NP_886984.1 33599424 2663008 complement(450558..452087) 1 NC_002927.3 hypothetical protein 452087 2663008 BB0435 Bordetella bronchiseptica RB50 hypothetical protein NP_886984.1 450558 R 257310 CDS NP_886985.1 33599425 2662777 complement(452084..455269) 1 NC_002927.3 multidrug-efflux system protein 455269 2662777 BB0436 Bordetella bronchiseptica RB50 multidrug-efflux system protein NP_886985.1 452084 R 257310 CDS NP_886986.1 33599426 2663025 complement(455286..456467) 1 NC_002927.3 hemolysin D 456467 2663025 BB0437 Bordetella bronchiseptica RB50 hemolysin D NP_886986.1 455286 R 257310 CDS NP_886987.1 33599427 2663754 456711..457733 1 NC_002927.3 LysR family transcriptional regulator 457733 2663754 BB0438 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_886987.1 456711 D 257310 CDS NP_886988.1 33599428 2663831 457942..459045 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3604; hypothetical protein 459045 2663831 BB0439 Bordetella bronchiseptica RB50 hypothetical protein NP_886988.1 457942 D 257310 CDS NP_886989.1 33599429 2663755 459132..459896 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3605; hypothetical protein 459896 2663755 BB0440 Bordetella bronchiseptica RB50 hypothetical protein NP_886989.1 459132 D 257310 CDS NP_886990.1 33599430 2663714 460018..461208 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3606; voltage-gated potassium channel 461208 2663714 BB0441 Bordetella bronchiseptica RB50 voltage-gated potassium channel NP_886990.1 460018 D 257310 CDS NP_886991.1 33599431 2663594 complement(461216..461611) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0518; hypothetical protein 461611 2663594 BB0442 Bordetella bronchiseptica RB50 hypothetical protein NP_886991.1 461216 R 257310 CDS NP_886992.1 33599432 2663066 461781..462482 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0519; glutathione S-transferase 462482 2663066 BB0443 Bordetella bronchiseptica RB50 glutathione S-transferase NP_886992.1 461781 D 257310 CDS NP_886993.1 33599433 2663088 462745..463605 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0520; hypothetical protein 463605 2663088 BB0444 Bordetella bronchiseptica RB50 hypothetical protein NP_886993.1 462745 D 257310 CDS NP_886994.1 33599434 2663064 complement(463681..464016) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0521; hypothetical protein 464016 2663064 BB0445 Bordetella bronchiseptica RB50 hypothetical protein NP_886994.1 463681 R 257310 CDS NP_886995.1 33599435 2663488 complement(464157..465302) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0522; metal-activated pyridoxal enzyme 465302 2663488 BB0446 Bordetella bronchiseptica RB50 metal-activated pyridoxal enzyme NP_886995.1 464157 R 257310 CDS NP_886996.1 33599436 2663090 complement(465329..465988) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0523; haloacid dehalogenase 465988 2663090 BB0447 Bordetella bronchiseptica RB50 haloacid dehalogenase NP_886996.1 465329 R 257310 CDS NP_886997.1 33599437 2663581 466080..466988 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0524; transcriptional regulator 466988 2663581 BB0448 Bordetella bronchiseptica RB50 transcriptional regulator NP_886997.1 466080 D 257310 CDS NP_886998.1 33599438 2663711 466985..467179 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0525; integrase 467179 2663711 BB0449 Bordetella bronchiseptica RB50 integrase NP_886998.1 466985 D 257310 CDS NP_886999.1 33599439 2663699 467491..473949 1 NC_002927.3 autotransporter 473949 2663699 BB0450 Bordetella bronchiseptica RB50 autotransporter NP_886999.1 467491 D 257310 CDS NP_887000.1 33599440 2662244 474034..474195 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0526; hypothetical protein 474195 2662244 BB0450A Bordetella bronchiseptica RB50 hypothetical protein NP_887000.1 474034 D 257310 CDS NP_887001.1 33599441 2659695 474227..474358 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0527; entericidin A anti-toxin 474358 ecnA1 2659695 ecnA1 Bordetella bronchiseptica RB50 entericidin A anti-toxin NP_887001.1 474227 D 257310 CDS NP_887002.1 33599442 2660195 474574..481707 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0529; autotransporter 481707 2660195 BB0452 Bordetella bronchiseptica RB50 autotransporter NP_887002.1 474574 D 257310 CDS NP_887003.1 33599443 2659612 481759..482340 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0530; hypothetical protein 482340 2659612 BB0453 Bordetella bronchiseptica RB50 hypothetical protein NP_887003.1 481759 D 257310 CDS NP_887004.1 33599444 2661353 482729..483706 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0531; hypothetical protein 483706 2661353 BB0454 Bordetella bronchiseptica RB50 hypothetical protein NP_887004.1 482729 D 257310 CDS NP_887005.1 33599445 2660291 483720..485294 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0532; substrate-CoA ligase 485294 2660291 BB0455 Bordetella bronchiseptica RB50 substrate-CoA ligase NP_887005.1 483720 D 257310 CDS NP_887006.1 33599446 2660150 485302..486042 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0533; transcriptional regulator 486042 2660150 BB0456 Bordetella bronchiseptica RB50 transcriptional regulator NP_887006.1 485302 D 257310 CDS NP_887007.1 33599447 2661190 486066..486830 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0534; enoyl-CoA hydratase 486830 2661190 BB0457 Bordetella bronchiseptica RB50 enoyl-CoA hydratase NP_887007.1 486066 D 257310 CDS NP_887008.1 33599448 2662249 486875..487210 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0535; carboxymuconolactone decarboxylase 487210 2662249 BB0458 Bordetella bronchiseptica RB50 carboxymuconolactone decarboxylase NP_887008.1 486875 D 257310 CDS NP_887009.1 33599449 2662306 487264..488265 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0536; hypothetical protein 488265 2662306 BB0459 Bordetella bronchiseptica RB50 hypothetical protein NP_887009.1 487264 D 257310 CDS NP_887010.1 33599450 2662358 488366..489388 1 NC_002927.3 zinc-binding dehydrogenase 489388 2662358 BB0460 Bordetella bronchiseptica RB50 zinc-binding dehydrogenase NP_887010.1 488366 D 257310 CDS NP_887011.1 33599451 2662386 489480..490733 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0438; hypothetical protein 490733 2662386 BB0461 Bordetella bronchiseptica RB50 hypothetical protein NP_887011.1 489480 D 257310 CDS NP_887012.1 33599452 2661641 complement(490711..491673) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0437; LysR family transcriptional regulator 491673 2661641 BB0462 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_887012.1 490711 R 257310 CDS NP_887013.1 33599453 2659167 491826..492302 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0436; hypothetical protein 492302 2659167 BB0463 Bordetella bronchiseptica RB50 hypothetical protein NP_887013.1 491826 D 257310 CDS NP_887014.1 33599454 2659312 492299..493531 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0435; dehydratase/racemase 493531 2659312 BB0464 Bordetella bronchiseptica RB50 dehydratase/racemase NP_887014.1 492299 D 257310 CDS NP_887015.1 33599455 2659653 493595..494560 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0434; hypothetical protein 494560 2659653 BB0465 Bordetella bronchiseptica RB50 hypothetical protein NP_887015.1 493595 D 257310 CDS NP_887016.1 33599456 2662444 complement(494547..495533) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0433; LysR family transcriptional regulator 495533 2662444 BB0466 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_887016.1 494547 R 257310 CDS NP_887017.1 33599457 2659154 495677..496081 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0432; hypothetical protein 496081 2659154 BB0467 Bordetella bronchiseptica RB50 hypothetical protein NP_887017.1 495677 D 257310 CDS NP_887018.1 33599458 2662408 496261..499632 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0431; molybdopterin oxidoreductase 499632 2662408 BB0468 Bordetella bronchiseptica RB50 molybdopterin oxidoreductase NP_887018.1 496261 D 257310 CDS NP_887019.1 33599459 2662811 499663..501126 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0430; short-chain fatty acids transporter 501126 2662811 BB0469 Bordetella bronchiseptica RB50 short-chain fatty acids transporter NP_887019.1 499663 D 257310 CDS NP_887020.1 33599460 2663179 501283..501918 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0428; GntR family transcriptional regulator 501918 2663179 BB0470 Bordetella bronchiseptica RB50 GntR family transcriptional regulator NP_887020.1 501283 D 257310 CDS NP_887021.1 33599461 2663492 complement(501948..502385) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0427; hypothetical protein 502385 2663492 BB0471 Bordetella bronchiseptica RB50 hypothetical protein NP_887021.1 501948 R 257310 CDS NP_887022.1 33599462 2663713 503887..504090 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0426; cold shock protein 504090 cspA 2663713 cspA Bordetella bronchiseptica RB50 cold shock protein NP_887022.1 503887 D 257310 CDS NP_887023.1 33599463 2662261 504267..505172 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0425; LysR family transcriptional regulator 505172 2662261 BB0473 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_887023.1 504267 D 257310 CDS NP_887024.1 33599464 2662038 complement(505198..506172) 1 NC_002927.3 hypothetical protein 506172 2662038 BB0474 Bordetella bronchiseptica RB50 hypothetical protein NP_887024.1 505198 R 257310 CDS NP_887025.1 33599465 2660258 complement(506183..507772) 1 NC_002927.3 sulfatase 507772 2660258 BB0475 Bordetella bronchiseptica RB50 sulfatase NP_887025.1 506183 R 257310 CDS NP_887026.1 33599466 2660079 complement(507780..508820) 1 NC_002927.3 hypothetical protein 508820 2660079 BB0476 Bordetella bronchiseptica RB50 hypothetical protein NP_887026.1 507780 R 257310 CDS NP_887027.1 33599467 2659615 509096..510103 1 NC_002927.3 hypothetical protein 510103 2659615 BB0477 Bordetella bronchiseptica RB50 hypothetical protein NP_887027.1 509096 D 257310 CDS NP_887028.1 33599468 2659338 510163..511812 1 NC_002927.3 hypothetical protein 511812 2659338 BB0478 Bordetella bronchiseptica RB50 hypothetical protein NP_887028.1 510163 D 257310 CDS NP_887029.1 33599469 2662418 511809..512819 1 NC_002927.3 hypothetical protein 512819 2662418 BB0479 Bordetella bronchiseptica RB50 hypothetical protein NP_887029.1 511809 D 257310 CDS NP_887030.1 33599470 2662173 complement(512946..514190) 1 NC_002927.3 hypothetical protein 514190 2662173 BB0480 Bordetella bronchiseptica RB50 hypothetical protein NP_887030.1 512946 R 257310 CDS NP_887031.1 33599471 2662326 complement(514187..514810) 1 NC_002927.3 TetR family transcriptional regulator 514810 2662326 BB0481 Bordetella bronchiseptica RB50 TetR family transcriptional regulator NP_887031.1 514187 R 257310 CDS NP_887032.1 33599472 2662266 complement(515442..516023) 1 NC_002927.3 no significant database matches; hypothetical protein 516023 2662266 BB0482 Bordetella bronchiseptica RB50 hypothetical protein NP_887032.1 515442 R 257310 CDS NP_887033.1 33599473 2659097 complement(516036..517469) 1 NC_002927.3 Similar to Pediococcus pentosaceus UsG protein usG SWALL:Q9F3X3 (EMBL:AJ276891) (477 aa) fasta scores: E(): 1.7e-64, 43.08% id in 434 aa; hypothetical protein 517469 2659097 BB0483 Bordetella bronchiseptica RB50 hypothetical protein NP_887033.1 516036 R 257310 CDS NP_887034.1 33599474 2660114 complement(517497..517994) 1 NC_002927.3 no significant database matches; hypothetical protein 517994 2660114 BB0484 Bordetella bronchiseptica RB50 hypothetical protein NP_887034.1 517497 R 257310 CDS NP_887035.1 33599475 2662149 complement(518018..518212) 1 NC_002927.3 no significant database matches; hypothetical protein 518212 2662149 BB0484A Bordetella bronchiseptica RB50 hypothetical protein NP_887035.1 518018 R 257310 CDS NP_887036.1 33599476 2662578 complement(518209..518442) 1 NC_002927.3 Similar to Rhizobium meliloti hypothetical 12.7 kDa protein SWALL:Q91UM4 (EMBL:AJ304453) (110 aa) fasta scores: E(): 3.3e-10, 65.45% id in 55 aa, and to Escherichia coli hypothetical 13.1 kDa protein SWALL:Q91UU7 (EMBL:AJ297913) (117 aa) fasta scores: E(): 2.1e-07, 47.22% id in 72 aa; hypothetical protein 518442 2662578 BB0485 Bordetella bronchiseptica RB50 hypothetical protein NP_887036.1 518209 R 257310 CDS NP_887037.1 33599477 2659250 complement(518550..518783) 1 NC_002927.3 no significant database matches; hypothetical protein 518783 2659250 BB0486 Bordetella bronchiseptica RB50 hypothetical protein NP_887037.1 518550 R 257310 CDS NP_887038.1 33599478 2661712 complement(518815..519105) 1 NC_002927.3 no significant database matches; hypothetical protein 519105 2661712 BB0487 Bordetella bronchiseptica RB50 hypothetical protein NP_887038.1 518815 R 257310 CDS NP_887039.1 33599479 2661805 complement(519095..520147) 1 NC_002927.3 Similar to Rhizobium meliloti VirB6 protein SWALL:Q91UR2 (EMBL:AJ304453) (360 aa) fasta scores: E(): 2.9e-40, 46.51% id in 359 aa, and to Escherichia coli VirB6 protein SWALL:Q91UX1 (EMBL:AJ297913) (360 aa) fasta scores: E(): 1.9e-37, 45.4% id in 359 aa; hypothetical protein 520147 virB6 2661805 virB6 Bordetella bronchiseptica RB50 hypothetical protein NP_887039.1 519095 R 257310 CDS NP_887040.1 33599480 2660164 complement(520149..520409) 1 NC_002927.3 Similar to Rhizobium meliloti Eex protein SWALL:Q91UR1 (EMBL:AJ304453) (93 aa) fasta scores: E(): 4.7e-10, 45.94% id in 74 aa, and to Escherichia coli hypothetical 10.3 kDa protein SWALL:Q91UX2 (EMBL:AJ297913) (98 aa) fasta scores: E(): 5.8e-10, 42.85% id in 91 aa; hypothetical protein 520409 2660164 BB0489 Bordetella bronchiseptica RB50 hypothetical protein NP_887040.1 520149 R 257310 CDS NP_887041.1 33599481 2660253 complement(520406..520852) 1 NC_002927.3 no significant database matches; hypothetical protein 520852 2660253 BB0490 Bordetella bronchiseptica RB50 hypothetical protein NP_887041.1 520406 R 257310 CDS NP_887042.1 33599482 2660216 complement(520863..521588) 1 NC_002927.3 Similar to Escherichia coli VirB5 protein SWALL:Q91UX3 (EMBL:AJ297913) (239 aa) fasta scores: E(): 1.1e-50, 67.71% id in 223 aa, and to Rhizobium meliloti VirB5 protein SWALL:Q91UQ9 (EMBL:AJ304453) (242 aa) fasta scores: E(): 4.6e-43, 59.05% id in 232 aa; hypothetical protein 521588 virB5 2660216 virB5 Bordetella bronchiseptica RB50 hypothetical protein NP_887042.1 520863 R 257310 CDS NP_887043.1 33599483 2660130 complement(521846..522124) 1 NC_002927.3 no significant database matches; hypothetical protein 522124 2660130 BB0492 Bordetella bronchiseptica RB50 hypothetical protein NP_887043.1 521846 R 257310 CDS NP_887044.1 33599484 2660313 complement(522129..523124) 1 NC_002927.3 Similar to Escherichia coli VirD2 protein SWALL:Q91UW0 (EMBL:AJ297913) (364 aa) fasta scores: E(): 1.4e-49, 53.65% id in 315 aa, and to Rhizobium meliloti VirD2 protein SWALL:Q91US6 (EMBL:AJ304453) (352 aa) fasta scores: E(): 2.1e-49, 50.13% id in 359 aa; hypothetical protein 523124 virD2 2660313 virD2 Bordetella bronchiseptica RB50 hypothetical protein NP_887044.1 522129 R 257310 CDS NP_887045.1 33599485 2661568 complement(523121..523660) 1 NC_002927.3 Similar to Escherichia coli hypothetical 20.3 kDa protein SWALL:Q91UV9 (EMBL:AJ297913) (180 aa) fasta scores: E(): 2.2e-19, 41.76% id in 170 aa, and to Rhizobium meliloti hypothetical 22.9 kDa protein SWALL:Q91US7 (EMBL:AJ304453) (201 aa) fasta scores: E(): 4e-17, 36.93% id in 176 aa; hypothetical protein 523660 2661568 BB0494 Bordetella bronchiseptica RB50 hypothetical protein NP_887045.1 523121 R 257310 CDS NP_887046.1 33599486 2660244 complement(523657..524667) 1 NC_002927.3 no significant database matches; hypothetical protein 524667 2660244 BB0495 Bordetella bronchiseptica RB50 hypothetical protein NP_887046.1 523657 R 257310 CDS NP_887047.1 33599487 2660162 525357..525713 1 NC_002927.3 Similar to the N-terminal regions of Escherichia coli O157:H7 O218 protein or PphB or z4044 or ecs3590 SWALL:Q9S6P9 (EMBL:AJ006210) (218 aa) fasta scores: E(): 2.6e-09, 42.15% id in 102 aa, and to Escherichia coli O157:H7 PrpB SWALL:Q9XDI3 (EMBL:AF054420) (218 aa) fasta scores: E(): 2.6e-09, 42.15% id in 102 aa; hypothetical protein 525713 2660162 BB0496 Bordetella bronchiseptica RB50 hypothetical protein NP_887047.1 525357 D 257310 CDS NP_887048.1 33599488 2658953 complement(525735..528851) 1 NC_002927.3 no significant database matches; hypothetical protein 528851 2658953 BB0497 Bordetella bronchiseptica RB50 hypothetical protein NP_887048.1 525735 R 257310 CDS NP_887049.1 33599489 2660188 529049..529693 1 NC_002927.3 no significant database matches; hypothetical protein 529693 2660188 BB0498 Bordetella bronchiseptica RB50 hypothetical protein NP_887049.1 529049 D 257310 CDS NP_887050.1 33599490 2660282 complement(529856..530212) 1 NC_002927.3 hypothetical protein 530212 2660282 BB0499 Bordetella bronchiseptica RB50 hypothetical protein NP_887050.1 529856 R 257310 CDS NP_887051.1 33599491 2660169 complement(530239..530604) 1 NC_002927.3 Similar to Haemophilus influenzae integrase/recombinase Hi1572 SWALL:YF72_HAEIN (SWALL:P46495) (366 aa) fasta scores: E(): 0.002, 31.89% id in 116 aa, and to Ralstonia solanacearum probable integrase/recombinase Rsc1655 or Rs03938 SWALL:Q8XYV1 (EMBL:AL646065) (334 aa) fasta scores: E(): 0.023, 39.24% id in 79 aa; integrase 530604 2660169 BB0500 Bordetella bronchiseptica RB50 integrase NP_887051.1 530239 R 257310 CDS NP_887052.1 33599492 2659160 530986..532893 1 NC_002927.3 molecular chaperone; heat shock protein 90 532893 htpG 2659160 htpG Bordetella bronchiseptica RB50 heat shock protein 90 NP_887052.1 530986 D 257310 CDS NP_887053.1 33599493 2662569 complement(533184..533804) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0075; glutathione S-transferase 533804 2662569 BB0502 Bordetella bronchiseptica RB50 glutathione S-transferase NP_887053.1 533184 R 257310 CDS NP_887054.1 33599494 2661213 complement(533836..534417) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0076; N-acetyl-anhydromuranmyl-L-alanine amidase 534417 ampD 2661213 ampD Bordetella bronchiseptica RB50 N-acetyl-anhydromuranmyl-L-alanine amidase NP_887054.1 533836 R 257310 CDS NP_887055.1 33599495 2659212 complement(534503..534754) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0077; hypothetical protein 534754 2659212 BB0504 Bordetella bronchiseptica RB50 hypothetical protein NP_887055.1 534503 R 257310 CDS NP_887056.1 33599496 2662297 complement(534756..535505) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0078; hypothetical protein 535505 2662297 BB0505 Bordetella bronchiseptica RB50 hypothetical protein NP_887056.1 534756 R 257310 CDS NP_887057.1 33599497 2662302 535704..537113 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0079; signal recognition particle protein 537113 ffh 2662302 ffh Bordetella bronchiseptica RB50 signal recognition particle protein NP_887057.1 535704 D 257310 CDS NP_887058.1 33599498 2662387 complement(537246..537797) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3689; LysM domain/BON superfamily protein 537797 2662387 BB0507 Bordetella bronchiseptica RB50 LysM domain/BON superfamily protein NP_887058.1 537246 R 257310 CDS NP_887059.1 33599499 2662439 complement(537837..538037) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3690; hypothetical protein 538037 2662439 BB0508 Bordetella bronchiseptica RB50 hypothetical protein NP_887059.1 537837 R 257310 CDS NP_887060.1 33599500 2662122 complement(538048..538995) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3691; prolyl iminopeptidase 538995 2662122 BB0509 Bordetella bronchiseptica RB50 prolyl iminopeptidase NP_887060.1 538048 R 257310 CDS NP_887061.1 33599501 2659316 complement(538996..539826) 1 NC_002927.3 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 539826 trmB 2659316 trmB Bordetella bronchiseptica RB50 tRNA (guanine-N(7)-)-methyltransferase NP_887061.1 538996 R 257310 CDS NP_887062.1 33599502 2661698 539853..540752 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3693; LysR family transcriptional regulator 540752 2661698 BB0511 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_887062.1 539853 D 257310 CDS NP_887063.1 33599503 2661806 540796..542061 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3694; hypothetical protein 542061 2661806 BB0512 Bordetella bronchiseptica RB50 hypothetical protein NP_887063.1 540796 D 257310 CDS NP_887064.1 33599504 2661897 543053..544036 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3696; hypothetical protein 544036 2661897 BB0514 Bordetella bronchiseptica RB50 hypothetical protein NP_887064.1 543053 D 257310 CDS NP_887065.1 33599505 2660171 complement(544370..544711) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3697; hypothetical protein 544711 2660171 BB0515 Bordetella bronchiseptica RB50 hypothetical protein NP_887065.1 544370 R 257310 CDS NP_887066.1 33599506 2660237 544903..545700 1 NC_002927.3 transcriptional regulator 545700 2660237 BB0516 Bordetella bronchiseptica RB50 transcriptional regulator NP_887066.1 544903 D 257310 CDS NP_887067.1 33599507 2662530 545741..546922 1 NC_002927.3 dioxygenase subunit 546922 2662530 BB0517 Bordetella bronchiseptica RB50 dioxygenase subunit NP_887067.1 545741 D 257310 CDS NP_887068.1 33599508 2662547 546980..547438 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0070; hydroxylase 547438 2662547 BB0518 Bordetella bronchiseptica RB50 hydroxylase NP_887068.1 546980 D 257310 CDS NP_887069.1 33599509 2663362 547459..548640 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0069; hypothetical protein 548640 2663362 BB0519 Bordetella bronchiseptica RB50 hypothetical protein NP_887069.1 547459 D 257310 CDS NP_887070.1 33599510 2663307 548701..549237 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0068; hypothetical protein 549237 2663307 BB0520 Bordetella bronchiseptica RB50 hypothetical protein NP_887070.1 548701 D 257310 CDS NP_887071.1 33599511 2663415 549268..550539 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0067; integral membrane protein 550539 2663415 BB0521 Bordetella bronchiseptica RB50 integral membrane protein NP_887071.1 549268 D 257310 CDS NP_887072.1 33599512 2663226 550574..551632 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0066; oxidoreductase 551632 2663226 BB0522 Bordetella bronchiseptica RB50 oxidoreductase NP_887072.1 550574 D 257310 CDS NP_887073.1 33599513 2663319 551733..552050 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0065; ferredoxin 552050 2663319 BB0523 Bordetella bronchiseptica RB50 ferredoxin NP_887073.1 551733 D 257310 CDS NP_887074.1 33599514 2662960 552063..552644 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0064; hypothetical protein 552644 2662960 BB0524 Bordetella bronchiseptica RB50 hypothetical protein NP_887074.1 552063 D 257310 CDS NP_887075.1 33599515 2662851 552701..553675 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0063; hypothetical protein 553675 2662851 BB0525 Bordetella bronchiseptica RB50 hypothetical protein NP_887075.1 552701 D 257310 CDS NP_887076.1 33599516 2663342 complement(553982..554443) 1 NC_002927.3 no significant database matches; hypothetical protein 554443 2663342 BB0526 Bordetella bronchiseptica RB50 hypothetical protein NP_887076.1 553982 R 257310 CDS NP_887077.1 33599517 2663529 complement(554544..555839) 1 NC_002927.3 hypothetical protein 555839 2663529 BB0527 Bordetella bronchiseptica RB50 hypothetical protein NP_887077.1 554544 R 257310 CDS NP_887078.1 33599518 2663416 complement(555836..556165) 1 NC_002927.3 Similar to Rhizobium etli hypothetical protein Yh035 SWALL:AAM54968 (EMBL:U80928) (101 aa) fasta scores: E(): 9.2e-09, 40.81% id in 98 aa, and to Caulobacter crescentus transcriptional regulator, cro/ci family Cc2771 SWALL:Q9A4Q9 (EMBL:AE005942) (119 aa) fasta scores: E(): 0.043, 30.61% id in 98 aa; DNA-binding protein 556165 2663416 BB0528 Bordetella bronchiseptica RB50 DNA-binding protein NP_887078.1 555836 R 257310 CDS NP_887079.1 33599519 2662876 556234..556410 1 NC_002927.3 no significant database matches; hypothetical protein 556410 2662876 BB0529 Bordetella bronchiseptica RB50 hypothetical protein NP_887079.1 556234 D 257310 CDS NP_887080.1 33599520 2663451 complement(556568..557497) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0059; regulatory protein 557497 2663451 BB0530 Bordetella bronchiseptica RB50 regulatory protein NP_887080.1 556568 R 257310 CDS NP_887081.1 33599521 2663623 557617..558600 1 NC_002927.3 hypothetical protein 558600 2663623 BB0531 Bordetella bronchiseptica RB50 hypothetical protein NP_887081.1 557617 D 257310 CDS NP_887082.1 33599522 2662853 558597..560729 1 NC_002927.3 acyl-CoA synthetase 560729 2662853 BB0532 Bordetella bronchiseptica RB50 acyl-CoA synthetase NP_887082.1 558597 D 257310 CDS NP_887083.1 33599523 2663263 560777..561511 1 NC_002927.3 enoyl-CoA hydratase 561511 2663263 BB0533 Bordetella bronchiseptica RB50 enoyl-CoA hydratase NP_887083.1 560777 D 257310 CDS NP_887084.1 33599524 2663228 561590..562567 1 NC_002927.3 hypothetical protein 562567 2663228 BB0534 Bordetella bronchiseptica RB50 hypothetical protein NP_887084.1 561590 D 257310 CDS NP_887085.1 33599525 2663111 563028..563627 1 NC_002927.3 hypothetical protein 563627 2663111 BB0535 Bordetella bronchiseptica RB50 hypothetical protein NP_887085.1 563028 D 257310 CDS NP_887086.1 33599526 2663156 563696..564688 1 NC_002927.3 hypothetical protein 564688 2663156 BB0536 Bordetella bronchiseptica RB50 hypothetical protein NP_887086.1 563696 D 257310 CDS NP_887087.1 33599527 2663863 564738..566327 1 NC_002927.3 sulfurtransferase 566327 2663863 BB0537 Bordetella bronchiseptica RB50 sulfurtransferase NP_887087.1 564738 D 257310 CDS NP_887088.1 33599528 2663030 566368..567258 1 NC_002927.3 LysR family transcriptional regulator 567258 2663030 BB0538 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_887088.1 566368 D 257310 CDS NP_887089.1 33599529 2663421 567255..568961 1 NC_002927.3 hypothetical protein 568961 2663421 BB0539 Bordetella bronchiseptica RB50 hypothetical protein NP_887089.1 567255 D 257310 CDS NP_887090.1 33599530 2663455 569066..570307 1 NC_002927.3 hypothetical protein 570307 2663455 BB0540 Bordetella bronchiseptica RB50 hypothetical protein NP_887090.1 569066 D 257310 CDS NP_887091.1 33599531 2663110 570304..571074 1 NC_002927.3 enoyl-CoA hydratase 571074 2663110 BB0541 Bordetella bronchiseptica RB50 enoyl-CoA hydratase NP_887091.1 570304 D 257310 CDS NP_887092.1 33599532 2663109 571123..572109 1 NC_002927.3 hypothetical protein 572109 2663109 BB0542 Bordetella bronchiseptica RB50 hypothetical protein NP_887092.1 571123 D 257310 CDS NP_887093.1 33599533 2663408 572106..572918 1 NC_002927.3 transcriptional regulator 572918 2663408 BB0543 Bordetella bronchiseptica RB50 transcriptional regulator NP_887093.1 572106 D 257310 CDS NP_887094.1 33599534 2663748 complement(572943..573905) 1 NC_002927.3 hypothetical protein 573905 2663748 BB0544 Bordetella bronchiseptica RB50 hypothetical protein NP_887094.1 572943 R 257310 CDS NP_887095.1 33599535 2663214 complement(573987..574385) 1 NC_002927.3 hypothetical protein 574385 2663214 BB0545 Bordetella bronchiseptica RB50 hypothetical protein NP_887095.1 573987 R 257310 CDS NP_887096.1 33599536 2663243 complement(574382..575554) 1 NC_002927.3 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 575554 2663243 BB0546 Bordetella bronchiseptica RB50 acetyl-CoA acetyltransferase NP_887096.1 574382 R 257310 CDS NP_887097.1 33599537 2663213 complement(575598..577154) 1 NC_002927.3 ligase 577154 2663213 BB0547 Bordetella bronchiseptica RB50 ligase NP_887097.1 575598 R 257310 CDS NP_887098.1 33599538 2663881 577323..578339 1 NC_002927.3 LacI family regulatory protein 578339 2663881 BB0548 Bordetella bronchiseptica RB50 LacI family regulatory protein NP_887098.1 577323 D 257310 CDS NP_887099.1 33599539 2663606 578507..578845 1 NC_002927.3 hypothetical protein 578845 2663606 BB0549 Bordetella bronchiseptica RB50 hypothetical protein NP_887099.1 578507 D 257310 CDS NP_887100.1 33599540 2663398 complement(578888..579097) 1 NC_002927.3 hypothetical protein 579097 2663398 BB0550 Bordetella bronchiseptica RB50 hypothetical protein NP_887100.1 578888 R 257310 CDS NP_887101.1 33599541 2663231 complement(579104..580525) 1 NC_002927.3 hypothetical protein 580525 2663231 BB0551 Bordetella bronchiseptica RB50 hypothetical protein NP_887101.1 579104 R 257310 CDS NP_887102.1 33599542 2663270 complement(580525..581607) 1 NC_002927.3 Zinc-binding dehydrogenase 581607 2663270 BB0552 Bordetella bronchiseptica RB50 Zinc-binding dehydrogenase NP_887102.1 580525 R 257310 CDS NP_887103.1 33599543 2663035 581839..582741 1 NC_002927.3 hypothetical protein 582741 2663035 BB0553 Bordetella bronchiseptica RB50 hypothetical protein NP_887103.1 581839 D 257310 CDS NP_887104.1 33599544 2663388 582766..583131 1 NC_002927.3 carboxymuconolactone decarboxylase 583131 2663388 BB0554 Bordetella bronchiseptica RB50 carboxymuconolactone decarboxylase NP_887104.1 582766 D 257310 CDS NP_887105.1 33599545 2663062 complement(583179..583949) 1 NC_002927.3 enoyl-CoA hydratase 583949 2663062 BB0555 Bordetella bronchiseptica RB50 enoyl-CoA hydratase NP_887105.1 583179 R 257310 CDS NP_887106.1 33599546 2663668 complement(583996..585183) 1 NC_002927.3 iron-containing alcohol dehydrogenase 585183 2663668 BB0556 Bordetella bronchiseptica RB50 iron-containing alcohol dehydrogenase NP_887106.1 583996 R 257310 CDS NP_887107.1 33599547 2663016 complement(585233..586474) 1 NC_002927.3 CaiB/BaiF family protein 586474 2663016 BB0557 Bordetella bronchiseptica RB50 CaiB/BaiF family protein NP_887107.1 585233 R 257310 CDS NP_887108.1 33599548 2662934 586713..587924 1 NC_002927.3 racemase 587924 2662934 BB0558 Bordetella bronchiseptica RB50 racemase NP_887108.1 586713 D 257310 CDS NP_887109.1 33599549 2663473 588130..589095 1 NC_002927.3 hypothetical protein 589095 2663473 BB0559 Bordetella bronchiseptica RB50 hypothetical protein NP_887109.1 588130 D 257310 CDS NP_887110.1 33599550 2663272 complement(589158..590045) 1 NC_002927.3 LysR family transcriptional regulator 590045 2663272 BB0560 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_887110.1 589158 R 257310 CDS NP_887111.1 33599551 2663720 complement(590154..590864) 1 NC_002927.3 hypothetical protein 590864 2663720 BB0561 Bordetella bronchiseptica RB50 hypothetical protein NP_887111.1 590154 R 257310 CDS NP_887112.1 33599552 2662962 complement(590917..591897) 1 NC_002927.3 hypothetical protein 591897 2662962 BB0562 Bordetella bronchiseptica RB50 hypothetical protein NP_887112.1 590917 R 257310 CDS NP_887113.1 33599553 2663677 592224..593390 1 NC_002927.3 acyl-CoA dehydrogenase 593390 2663677 BB0563 Bordetella bronchiseptica RB50 acyl-CoA dehydrogenase NP_887113.1 592224 D 257310 CDS NP_887114.1 33599554 2663526 593508..594488 1 NC_002927.3 hypothetical protein 594488 2663526 BB0564 Bordetella bronchiseptica RB50 hypothetical protein NP_887114.1 593508 D 257310 CDS NP_887115.1 33599555 2663085 complement(594583..595119) 1 NC_002927.3 hypothetical protein 595119 2663085 BB0565 Bordetella bronchiseptica RB50 hypothetical protein NP_887115.1 594583 R 257310 CDS NP_887116.1 33599556 2663703 complement(595116..596426) 1 NC_002927.3 aconitase family protein 596426 2663703 BB0566 Bordetella bronchiseptica RB50 aconitase family protein NP_887116.1 595116 R 257310 CDS NP_887117.1 33599557 2663783 596595..597488 1 NC_002927.3 LysR family transcriptional regulator 597488 2663783 BB0567 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_887117.1 596595 D 257310 CDS NP_887118.1 33599558 2663596 complement(597522..598937) 1 NC_002927.3 hypothetical protein 598937 2663596 BB0568 Bordetella bronchiseptica RB50 hypothetical protein NP_887118.1 597522 R 257310 CDS NP_887119.1 33599559 2663097 complement(598934..599176) 1 NC_002927.3 hypothetical protein 599176 2663097 BB0569 Bordetella bronchiseptica RB50 hypothetical protein NP_887119.1 598934 R 257310 CDS NP_887120.1 33599560 2663599 complement(599177..600001) 1 NC_002927.3 hydrolase 600001 2663599 BB0570 Bordetella bronchiseptica RB50 hydrolase NP_887120.1 599177 R 257310 CDS NP_887121.1 33599561 2663771 complement(600004..600738) 1 NC_002927.3 branched-chain amino acid transport ATP-binding protein 600738 2663771 BB0571 Bordetella bronchiseptica RB50 branched-chain amino acid transport ATP-binding protein NP_887121.1 600004 R 257310 CDS NP_887122.1 33599562 2662771 complement(600731..601444) 1 NC_002927.3 ABC transporter ATP-binding protein 601444 2662771 BB0572 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_887122.1 600731 R 257310 CDS NP_887123.1 33599563 2663728 complement(601446..602483) 1 NC_002927.3 branched-chain amino acid transport system permease 602483 2663728 BB0573 Bordetella bronchiseptica RB50 branched-chain amino acid transport system permease NP_887123.1 601446 R 257310 CDS NP_887124.1 33599564 2663540 complement(602500..603375) 1 NC_002927.3 branched-chain amino acid transport system permease 603375 2663540 BB0574 Bordetella bronchiseptica RB50 branched-chain amino acid transport system permease NP_887124.1 602500 R 257310 CDS NP_887125.1 33599565 2663727 complement(603399..604688) 1 NC_002927.3 hypothetical protein 604688 2663727 BB0575 Bordetella bronchiseptica RB50 hypothetical protein NP_887125.1 603399 R 257310 CDS NP_887126.1 33599566 2663053 604968..605711 1 NC_002927.3 TetR family transcriptional regulator 605711 2663053 BB0576 Bordetella bronchiseptica RB50 TetR family transcriptional regulator NP_887126.1 604968 D 257310 CDS NP_887127.1 33599567 2662436 complement(605748..606185) 1 NC_002927.3 hypothetical protein 606185 2662436 BB0577 Bordetella bronchiseptica RB50 hypothetical protein NP_887127.1 605748 R 257310 CDS NP_887128.1 33599568 2662397 complement(606182..607381) 1 NC_002927.3 hypothetical protein 607381 2662397 BB0578 Bordetella bronchiseptica RB50 hypothetical protein NP_887128.1 606182 R 257310 CDS NP_887129.1 33599569 2662348 complement(607422..608225) 1 NC_002927.3 hypothetical protein 608225 2662348 BB0579 Bordetella bronchiseptica RB50 hypothetical protein NP_887129.1 607422 R 257310 CDS NP_887130.1 33599570 2662315 complement(608219..608986) 1 NC_002927.3 short chain dehydrogenase 608986 2662315 BB0580 Bordetella bronchiseptica RB50 short chain dehydrogenase NP_887130.1 608219 R 257310 CDS NP_887131.1 33599571 2662254 complement(609049..610206) 1 NC_002927.3 acyl-CoA dehydrogenase 610206 2662254 BB0581 Bordetella bronchiseptica RB50 acyl-CoA dehydrogenase NP_887131.1 609049 R 257310 CDS NP_887132.1 33599572 2660215 complement(610218..610970) 1 NC_002927.3 short chain dehydrogenase 610970 2660215 BB0582 Bordetella bronchiseptica RB50 short chain dehydrogenase NP_887132.1 610218 R 257310 CDS NP_887133.1 33599573 2661725 complement(610988..612673) 1 NC_002927.3 crotonobetaine/carnitine-CoA ligase 612673 2661725 BB0583 Bordetella bronchiseptica RB50 crotonobetaine/carnitine-CoA ligase NP_887133.1 610988 R 257310 CDS NP_887134.1 33599574 2660106 complement(612724..613341) 1 NC_002927.3 hypothetical protein 613341 2660106 BB0584 Bordetella bronchiseptica RB50 hypothetical protein NP_887134.1 612724 R 257310 CDS NP_887135.1 33599575 2660051 613492..614298 1 NC_002927.3 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 614298 2660051 BB0585 Bordetella bronchiseptica RB50 enoyl-CoA hydratase NP_887135.1 613492 D 257310 CDS NP_887136.1 33599576 2661646 614487..615470 1 NC_002927.3 hypothetical protein 615470 2661646 BB0586 Bordetella bronchiseptica RB50 hypothetical protein NP_887136.1 614487 D 257310 CDS NP_887137.1 33599577 2661751 615473..616045 1 NC_002927.3 hypothetical protein 616045 2661751 BB0587 Bordetella bronchiseptica RB50 hypothetical protein NP_887137.1 615473 D 257310 CDS NP_887138.1 33599578 2661845 616063..617826 1 NC_002927.3 proposed role in polysaccahride synthesis; succinate dehydrogenase 617826 2661845 BB0588 Bordetella bronchiseptica RB50 succinate dehydrogenase NP_887138.1 616063 D 257310 CDS NP_887139.1 33599579 2660067 618085..618972 1 NC_002927.3 hypothetical protein 618972 2660067 BB0589 Bordetella bronchiseptica RB50 hypothetical protein NP_887139.1 618085 D 257310 CDS NP_887140.1 33599580 2661839 619008..619463 1 NC_002927.3 hypothetical protein 619463 2661839 BB0590 Bordetella bronchiseptica RB50 hypothetical protein NP_887140.1 619008 D 257310 CDS NP_887141.1 33599581 2662290 619489..620655 1 NC_002927.3 acyl-CoA dehydrogenase 620655 2662290 BB0591 Bordetella bronchiseptica RB50 acyl-CoA dehydrogenase NP_887141.1 619489 D 257310 CDS NP_887142.1 33599582 2662543 620748..621986 1 NC_002927.3 CaiB/BaiF family protein 621986 2662543 BB0592 Bordetella bronchiseptica RB50 CaiB/BaiF family protein NP_887142.1 620748 D 257310 CDS NP_887143.1 33599583 2662484 621988..623163 1 NC_002927.3 CaiB/BaiF family protein 623163 2662484 BB0593 Bordetella bronchiseptica RB50 CaiB/BaiF family protein NP_887143.1 621988 D 257310 CDS NP_887144.1 33599584 2662455 623174..624148 1 NC_002927.3 hypothetical protein 624148 2662455 BB0594 Bordetella bronchiseptica RB50 hypothetical protein NP_887144.1 623174 D 257310 CDS NP_887145.1 33599585 2662423 624159..624581 1 NC_002927.3 hypothetical protein 624581 2662423 BB0595 Bordetella bronchiseptica RB50 hypothetical protein NP_887145.1 624159 D 257310 CDS NP_887146.1 33599586 2662402 624601..625284 1 NC_002927.3 nitroreductase family protein 625284 2662402 BB0596 Bordetella bronchiseptica RB50 nitroreductase family protein NP_887146.1 624601 D 257310 CDS NP_887147.1 33599587 2662380 625319..626092 1 NC_002927.3 enoyl-CoA hydratase 626092 2662380 BB0597 Bordetella bronchiseptica RB50 enoyl-CoA hydratase NP_887147.1 625319 D 257310 CDS NP_887148.1 33599588 2662339 626248..627417 1 NC_002927.3 branched-chain amino acid ABC transporter substrate-binding protein 627417 2662339 BB0598 Bordetella bronchiseptica RB50 branched-chain amino acid ABC transporter substrate-binding protein NP_887148.1 626248 D 257310 CDS NP_887149.1 33599589 2662289 627434..628309 1 NC_002927.3 branched-chain amino acid ABC transporter permease 628309 2662289 BB0599 Bordetella bronchiseptica RB50 branched-chain amino acid ABC transporter permease NP_887149.1 627434 D 257310 CDS NP_887150.1 33599590 2662257 628302..629198 1 NC_002927.3 branched-chain amino acid transport system permease 629198 2662257 BB0600 Bordetella bronchiseptica RB50 branched-chain amino acid transport system permease NP_887150.1 628302 D 257310 CDS NP_887151.1 33599591 2661787 629208..629957 1 NC_002927.3 ABC transporter ATP-binding protein 629957 2661787 BB0601 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_887151.1 629208 D 257310 CDS NP_887152.1 33599592 2661730 629947..630666 1 NC_002927.3 ABC transporter ATP-binding protein 630666 2661730 BB0602 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_887152.1 629947 D 257310 CDS NP_887153.1 33599593 2661999 complement(630681..632651) 1 NC_002927.3 NADH:flavin oxidoreductase / NADH oxidase family protein 632651 2661999 BB0603 Bordetella bronchiseptica RB50 NADH:flavin oxidoreductase / NADH oxidase family protein NP_887153.1 630681 R 257310 CDS NP_887154.1 33599594 2661774 complement(632648..633430) 1 NC_002927.3 short chain dehydrogenase 633430 2661774 BB0604 Bordetella bronchiseptica RB50 short chain dehydrogenase NP_887154.1 632648 R 257310 CDS NP_887155.1 33599595 2660151 633717..634682 1 NC_002927.3 hypothetical protein 634682 2660151 BB0605 Bordetella bronchiseptica RB50 hypothetical protein NP_887155.1 633717 D 257310 CDS NP_887156.1 33599596 2661672 634694..635977 1 NC_002927.3 acetyl-CoA hydrolase/transferase 635977 2661672 BB0606 Bordetella bronchiseptica RB50 acetyl-CoA hydrolase/transferase NP_887156.1 634694 D 257310 CDS NP_887157.1 33599597 2659297 635991..637511 1 NC_002927.3 AMP-binding protein 637511 2659297 BB0607 Bordetella bronchiseptica RB50 AMP-binding protein NP_887157.1 635991 D 257310 CDS NP_887158.1 33599598 2662307 complement(637524..638333) 1 NC_002927.3 IclR family transcriptional regulator 638333 2662307 BB0608 Bordetella bronchiseptica RB50 IclR family transcriptional regulator NP_887158.1 637524 R 257310 CDS NP_887159.1 33599599 2662274 complement(638330..639139) 1 NC_002927.3 IclR family transcriptional regulator 639139 2662274 BB0609 Bordetella bronchiseptica RB50 IclR family transcriptional regulator NP_887159.1 638330 R 257310 CDS NP_887160.1 33599600 2662370 complement(639355..642858) 1 NC_002927.3 biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate; pyruvate carboxylase 642858 2662370 BB0610 Bordetella bronchiseptica RB50 pyruvate carboxylase NP_887160.1 639355 R 257310 CDS NP_887161.1 33599601 2662209 complement(642901..644049) 1 NC_002927.3 acyl-CoA dehydrogenase 644049 2662209 BB0611 Bordetella bronchiseptica RB50 acyl-CoA dehydrogenase NP_887161.1 642901 R 257310 CDS NP_887162.1 33599602 2659353 644138..645163 1 NC_002927.3 enoyl-CoA hydratase 645163 2659353 BB0612 Bordetella bronchiseptica RB50 enoyl-CoA hydratase NP_887162.1 644138 D 257310 CDS NP_887163.1 33599603 2662325 645189..645938 1 NC_002927.3 short chain dehydrogenase 645938 2662325 BB0613 Bordetella bronchiseptica RB50 short chain dehydrogenase NP_887163.1 645189 D 257310 CDS NP_887164.1 33599604 2659395 646042..647247 1 NC_002927.3 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 647247 2659395 BB0614 Bordetella bronchiseptica RB50 acetyl-CoA acetyltransferase NP_887164.1 646042 D 257310 CDS NP_887165.1 33599605 2659351 647257..649206 1 NC_002927.3 AMP-binding protein 649206 2659351 BB0615 Bordetella bronchiseptica RB50 AMP-binding protein NP_887165.1 647257 D 257310 CDS NP_887166.1 33599606 2660268 649220..650071 1 NC_002927.3 IclR family transcriptional regulator 650071 2660268 BB0616 Bordetella bronchiseptica RB50 IclR family transcriptional regulator NP_887166.1 649220 D 257310 CDS NP_887167.1 33599607 2661747 650122..651303 1 NC_002927.3 CaiB/BaiF family protein 651303 2661747 BB0617 Bordetella bronchiseptica RB50 CaiB/BaiF family protein NP_887167.1 650122 D 257310 CDS NP_887168.1 33599608 2661876 complement(651327..652256) 1 NC_002927.3 LysR family transcriptional regulator 652256 2661876 BB0618 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_887168.1 651327 R 257310 CDS NP_887169.1 33599609 2660248 652370..653536 1 NC_002927.3 acyl-CoA dehydrogenase 653536 2660248 BB0619 Bordetella bronchiseptica RB50 acyl-CoA dehydrogenase NP_887169.1 652370 D 257310 CDS NP_887170.1 33599610 2661645 653555..654310 1 NC_002927.3 electron transfer flavoprotein subunit beta 654310 etfB 2661645 etfB Bordetella bronchiseptica RB50 electron transfer flavoprotein subunit beta NP_887170.1 653555 D 257310 CDS NP_887171.1 33599611 2660249 654320..655258 1 NC_002927.3 electron transfer flavoprotein subunit alpha 655258 etfA 2660249 etfA Bordetella bronchiseptica RB50 electron transfer flavoprotein subunit alpha NP_887171.1 654320 D 257310 CDS NP_887172.1 33599612 2659296 655322..656170 1 NC_002927.3 hypothetical protein 656170 2659296 BB0622 Bordetella bronchiseptica RB50 hypothetical protein NP_887172.1 655322 D 257310 CDS NP_887173.1 33599613 2662498 complement(656241..657197) 1 NC_002927.3 LysR family transcriptional regulator 657197 2662498 BB0623 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_887173.1 656241 R 257310 CDS NP_887174.1 33599614 2661815 657308..658732 1 NC_002927.3 hypothetical protein 658732 2661815 BB0624 Bordetella bronchiseptica RB50 hypothetical protein NP_887174.1 657308 D 257310 CDS NP_887175.1 33599615 2661803 658958..659929 1 NC_002927.3 hypothetical protein 659929 2661803 BB0625 Bordetella bronchiseptica RB50 hypothetical protein NP_887175.1 658958 D 257310 CDS NP_887176.1 33599616 2662199 659992..660981 1 NC_002927.3 hypothetical protein 660981 2662199 BB0626 Bordetella bronchiseptica RB50 hypothetical protein NP_887176.1 659992 D 257310 CDS NP_887177.1 33599617 2662074 661132..661743 1 NC_002927.3 hypothetical protein 661743 2662074 BB0627 Bordetella bronchiseptica RB50 hypothetical protein NP_887177.1 661132 D 257310 CDS NP_887178.1 33599618 2662429 complement(661796..663217) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0030; hypothetical protein 663217 2662429 BB0628 Bordetella bronchiseptica RB50 hypothetical protein NP_887178.1 661796 R 257310 CDS NP_887179.1 33599619 2662118 complement(663259..664116) 1 NC_002927.3 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 664116 2662118 BB0629 Bordetella bronchiseptica RB50 enoyl-CoA hydratase NP_887179.1 663259 R 257310 CDS NP_887180.1 33599620 2662562 664279..665040 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3845; nitroreductase family protein 665040 2662562 BB0630 Bordetella bronchiseptica RB50 nitroreductase family protein NP_887180.1 664279 D 257310 CDS NP_887181.1 33599621 2661920 complement(665120..665806) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3846; TetR family transcriptional regulator 665806 2661920 BB0631 Bordetella bronchiseptica RB50 TetR family transcriptional regulator NP_887181.1 665120 R 257310 CDS NP_887182.1 33599622 2661927 666103..666987 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3847; hydroxymethylglutaryl-CoA lyase 666987 2661927 BB0632 Bordetella bronchiseptica RB50 hydroxymethylglutaryl-CoA lyase NP_887182.1 666103 D 257310 CDS NP_887183.1 33599623 2662401 666984..667763 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3848; enoyl-CoA hydratase 667763 2662401 BB0633 Bordetella bronchiseptica RB50 enoyl-CoA hydratase NP_887183.1 666984 D 257310 CDS NP_887184.1 33599624 2662389 667821..669083 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3849; CAIB/BAIF family protein 669083 2662389 BB0634 Bordetella bronchiseptica RB50 CAIB/BAIF family protein NP_887184.1 667821 D 257310 CDS NP_887185.1 33599625 2660592 669182..670153 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3850; lipoprotein 670153 2660592 BB0635 Bordetella bronchiseptica RB50 lipoprotein NP_887185.1 669182 D 257310 CDS NP_887186.1 33599626 2662279 670162..671334 1 NC_002927.3 iron-containing alcohol dehydrogenase 671334 2662279 BB0636 Bordetella bronchiseptica RB50 iron-containing alcohol dehydrogenase NP_887186.1 670162 D 257310 CDS NP_887187.1 33599627 2662368 671357..672115 1 NC_002927.3 enoyl-CoA hydratase 672115 2662368 BB0637 Bordetella bronchiseptica RB50 enoyl-CoA hydratase NP_887187.1 671357 D 257310 CDS NP_887188.1 33599628 2662516 complement(672156..673637) 1 NC_002927.3 amidase 673637 2662516 BB0638 Bordetella bronchiseptica RB50 amidase NP_887188.1 672156 R 257310 CDS NP_887189.1 33599629 2662456 complement(673641..674474) 1 NC_002927.3 hypothetical protein 674474 2662456 BB0639 Bordetella bronchiseptica RB50 hypothetical protein NP_887189.1 673641 R 257310 CDS NP_887190.1 33599630 2662447 complement(674492..674935) 1 NC_002927.3 hypothetical protein 674935 2662447 BB0640 Bordetella bronchiseptica RB50 hypothetical protein NP_887190.1 674492 R 257310 CDS NP_887191.1 33599631 2661226 complement(674975..676432) 1 NC_002927.3 aldehyde dehydrogenase 676432 2661226 BB0641 Bordetella bronchiseptica RB50 aldehyde dehydrogenase NP_887191.1 674975 R 257310 CDS NP_887192.1 33599632 2659298 complement(676440..677048) 1 NC_002927.3 NADPH-dependent FMN reductase 677048 2659298 BB0642 Bordetella bronchiseptica RB50 NADPH-dependent FMN reductase NP_887192.1 676440 R 257310 CDS NP_887193.1 33599633 2659178 complement(677056..677841) 1 NC_002927.3 transport system permease 677841 2659178 BB0643 Bordetella bronchiseptica RB50 transport system permease NP_887193.1 677056 R 257310 CDS NP_887194.1 33599634 2662355 complement(677857..678672) 1 NC_002927.3 ABC transporter ATP-binding protein 678672 2662355 BB0644 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_887194.1 677857 R 257310 CDS NP_887195.1 33599635 2662319 complement(678700..679776) 1 NC_002927.3 hypothetical protein 679776 2662319 BB0645 Bordetella bronchiseptica RB50 hypothetical protein NP_887195.1 678700 R 257310 CDS NP_887196.1 33599636 2661772 complement(679808..680914) 1 NC_002927.3 luciferase-like monooxygenase 680914 2661772 BB0646 Bordetella bronchiseptica RB50 luciferase-like monooxygenase NP_887196.1 679808 R 257310 CDS NP_887197.1 33599637 2662180 681160..681987 1 NC_002927.3 IclR family transcriptional regulator 681987 2662180 BB0647 Bordetella bronchiseptica RB50 IclR family transcriptional regulator NP_887197.1 681160 D 257310 CDS NP_887198.1 33599638 2660276 682015..682719 1 NC_002927.3 regulator 682719 2660276 BB0648 Bordetella bronchiseptica RB50 regulator NP_887198.1 682015 D 257310 CDS NP_887199.1 33599639 2659317 682816..683565 1 NC_002927.3 short chain dehydrogenase 683565 2659317 BB0649 Bordetella bronchiseptica RB50 short chain dehydrogenase NP_887199.1 682816 D 257310 CDS NP_887200.1 33599640 2662262 683633..684610 1 NC_002927.3 hypothetical protein 684610 2662262 BB0650 Bordetella bronchiseptica RB50 hypothetical protein NP_887200.1 683633 D 257310 CDS NP_887201.1 33599641 2661762 complement(684640..686124) 1 NC_002927.3 Similar to Bacillus stearothermophilus aldehyde dehydrogenase AldH SWALL:Q8RKJ5 (EMBL:AJ458323) (494 aa) fasta scores: E(): 1.8e-65, 39.28% id in 476 aa, and to Bacillus halodurans NADP-dependent aldehyde dehydrogenase DhaS or bh0539 SWALL:Q9KFE2 (EMBL:AP001508) (498 aa) fasta scores: E(): 6.6e-66, 38.86% id in 494 aa; aldehyde dehydrogenase 686124 2661762 BB0651 Bordetella bronchiseptica RB50 aldehyde dehydrogenase NP_887201.1 684640 R 257310 CDS NP_887202.1 33599642 2659208 complement(686130..687137) 1 NC_002927.3 Similar to Rhizobium meliloti hypothetical protein Ra1058 or Sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 2.9e-46, 43.16% id in 322 aa, and to Agrobacterium tumefaciens hypothetical protein Atu4727 or Agr_l_312 SWALL:Q8U6S9 (EMBL:AE009401) (329 aa) fasta scores: E(): 1.7e-42, 41.17% id in 323 aa; hypothetical protein 687137 2659208 BB0652 Bordetella bronchiseptica RB50 hypothetical protein NP_887202.1 686130 R 257310 CDS NP_887203.1 33599643 2662013 complement(687227..688513) 1 NC_002927.3 Similar to Homo sapiens 3-hydroxyisobutyrate dehydrogenase, mitochondrial precursor HibadH SWALL:D3HI_HUMAN (SWALL:P31937) (336 aa) fasta scores: E(): 1.1e-26, 36.03% id in 308 aa, and to Yersinia pestis 2-hydroxy-3-oxopropionate reductase Ypo3648 SWALL:Q8ZAY4 (EMBL:AJ414158) (296 aa) fasta scores: E(): 6e-31, 38.96% id in 290 aa; 3-hydroxyisobutyrate dehydrogenase 688513 2662013 BB0653 Bordetella bronchiseptica RB50 3-hydroxyisobutyrate dehydrogenase NP_887203.1 687227 R 257310 CDS NP_887204.1 33599644 2660265 complement(688637..689557) 1 NC_002927.3 Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa3778 SWALL:Q9HXL7 (EMBL:AE004796) (311 aa) fasta scores: E(): 1e-31, 35.19% id in 304 aa, and to Ralstonia solanacearum probable transcriptional regulator transcription regulator protein Rsp1571 or Rs02127 SWALL:Q8XPR7 (EMBL:AL646085) (324 aa) fasta scores: E(): 6.2e-25, 30.71% id in 280 aa; LysR family transcriptional regulator 689557 2660265 BB0654 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_887204.1 688637 R 257310 CDS NP_887205.1 33599645 2662416 complement(689827..690612) 1 NC_002927.3 transcriptional regulator 690612 2662416 BB0655 Bordetella bronchiseptica RB50 transcriptional regulator NP_887205.1 689827 R 257310 CDS NP_887206.1 33599646 2662559 690800..691990 1 NC_002927.3 acyl-CoA dehydrogenase 691990 2662559 BB0656 Bordetella bronchiseptica RB50 acyl-CoA dehydrogenase NP_887206.1 690800 D 257310 CDS NP_887207.1 33599647 2661926 691987..693495 1 NC_002927.3 acetyl-CoA synthetase 693495 2661926 BB0657 Bordetella bronchiseptica RB50 acetyl-CoA synthetase NP_887207.1 691987 D 257310 CDS NP_887208.1 33599648 2659601 693527..694546 1 NC_002927.3 hypothetical protein 694546 2659601 BB0658 Bordetella bronchiseptica RB50 hypothetical protein NP_887208.1 693527 D 257310 CDS NP_887209.1 33599649 2660468 694556..695041 1 NC_002927.3 hypothetical protein 695041 2660468 BB0659 Bordetella bronchiseptica RB50 hypothetical protein NP_887209.1 694556 D 257310 CDS NP_887210.1 33599650 2660486 695104..696087 1 NC_002927.3 hypothetical protein 696087 2660486 BB0660 Bordetella bronchiseptica RB50 hypothetical protein NP_887210.1 695104 D 257310 CDS NP_887211.1 33599651 2662390 complement(696133..696966) 1 NC_002927.3 enoyl-CoA hydratase 696966 2662390 BB0661 Bordetella bronchiseptica RB50 enoyl-CoA hydratase NP_887211.1 696133 R 257310 CDS NP_887212.1 33599652 2661910 complement(696963..698366) 1 NC_002927.3 hypothetical protein 698366 2661910 BB0662 Bordetella bronchiseptica RB50 hypothetical protein NP_887212.1 696963 R 257310 CDS NP_887213.1 33599653 2662545 complement(698363..699589) 1 NC_002927.3 glutaryl-CoA dehydrogenase 699589 gcdH 2662545 gcdH Bordetella bronchiseptica RB50 glutaryl-CoA dehydrogenase NP_887213.1 698363 R 257310 CDS NP_887214.1 33599654 2659225 complement(699636..700436) 1 NC_002927.3 enoyl CoA hydratase 700436 2659225 BB0664 Bordetella bronchiseptica RB50 enoyl CoA hydratase NP_887214.1 699636 R 257310 CDS NP_887215.1 33599655 2662468 complement(700455..701639) 1 NC_002927.3 thiolase 701639 2662468 BB0665 Bordetella bronchiseptica RB50 thiolase NP_887215.1 700455 R 257310 CDS NP_887216.1 33599656 2661773 701906..702880 1 NC_002927.3 hypothetical protein 702880 2661773 BB0666 Bordetella bronchiseptica RB50 hypothetical protein NP_887216.1 701906 D 257310 CDS NP_887217.1 33599657 2662260 702882..704324 1 NC_002927.3 acetyl-CoA synthetase 704324 2662260 BB0667 Bordetella bronchiseptica RB50 acetyl-CoA synthetase NP_887217.1 702882 D 257310 CDS NP_887218.1 33599658 2659301 704340..705053 1 NC_002927.3 hypothetical protein 705053 2659301 BB0668 Bordetella bronchiseptica RB50 hypothetical protein NP_887218.1 704340 D 257310 CDS NP_887219.1 33599659 2660206 complement(705028..705984) 1 NC_002927.3 LysR family transcriptional regulator 705984 2660206 BB0669 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_887219.1 705028 R 257310 CDS NP_887220.1 33599660 2661634 complement(706204..707061) 1 NC_002927.3 hydrolase 707061 2661634 BB0670 Bordetella bronchiseptica RB50 hydrolase NP_887220.1 706204 R 257310 CDS NP_887221.1 33599661 2660223 complement(707087..707689) 1 NC_002927.3 hypothetical protein 707689 2660223 BB0671 Bordetella bronchiseptica RB50 hypothetical protein NP_887221.1 707087 R 257310 CDS NP_887222.1 33599662 2662048 complement(707730..708764) 1 NC_002927.3 hypothetical protein 708764 2662048 BB0672 Bordetella bronchiseptica RB50 hypothetical protein NP_887222.1 707730 R 257310 CDS NP_887223.1 33599663 2662045 709017..709655 1 NC_002927.3 glutathione S-transferase 709655 gst 2662045 gst Bordetella bronchiseptica RB50 glutathione S-transferase NP_887223.1 709017 D 257310 CDS NP_887224.1 33599664 2659361 709693..710658 1 NC_002927.3 hypothetical protein 710658 2659361 BB0674 Bordetella bronchiseptica RB50 hypothetical protein NP_887224.1 709693 D 257310 CDS NP_887225.1 33599665 2661930 complement(710704..711690) 1 NC_002927.3 hypothetical protein 711690 2661930 BB0675 Bordetella bronchiseptica RB50 hypothetical protein NP_887225.1 710704 R 257310 CDS NP_887226.1 33599666 2661912 complement(711833..712531) 1 NC_002927.3 GntR family transcriptional regulator 712531 2661912 BB0676 Bordetella bronchiseptica RB50 GntR family transcriptional regulator NP_887226.1 711833 R 257310 CDS NP_887227.1 33599667 2662288 712745..714274 1 NC_002927.3 aldehyde dehydrogenase 714274 2662288 BB0677 Bordetella bronchiseptica RB50 aldehyde dehydrogenase NP_887227.1 712745 D 257310 CDS NP_887228.1 33599668 2662379 714291..715454 1 NC_002927.3 cystathionine beta-lyase 715454 metC 2662379 metC Bordetella bronchiseptica RB50 cystathionine beta-lyase NP_887228.1 714291 D 257310 CDS NP_887229.1 33599669 2662453 715485..715835 1 NC_002927.3 hypothetical protein 715835 2662453 BB0679 Bordetella bronchiseptica RB50 hypothetical protein NP_887229.1 715485 D 257310 CDS NP_887230.1 33599670 2662474 716138..717097 1 NC_002927.3 hypothetical protein 717097 2662474 BB0680 Bordetella bronchiseptica RB50 hypothetical protein NP_887230.1 716138 D 257310 CDS NP_887231.1 33599671 2662509 717122..718234 1 NC_002927.3 hypothetical protein 718234 2662509 BB0681 Bordetella bronchiseptica RB50 hypothetical protein NP_887231.1 717122 D 257310 CDS NP_887232.1 33599672 2662583 718249..719271 1 NC_002927.3 hypothetical protein 719271 2662583 BB0682 Bordetella bronchiseptica RB50 hypothetical protein NP_887232.1 718249 D 257310 CDS NP_887233.1 33599673 2663332 719268..720269 1 NC_002927.3 hypothetical protein 720269 2663332 BB0683 Bordetella bronchiseptica RB50 hypothetical protein NP_887233.1 719268 D 257310 CDS NP_887234.1 33599674 2663290 720272..720562 1 NC_002927.3 hypothetical protein 720562 2663290 BB0684 Bordetella bronchiseptica RB50 hypothetical protein NP_887234.1 720272 D 257310 CDS NP_887235.1 33599675 2663296 720652..721395 1 NC_002927.3 transcriptional regulator 721395 2663296 BB0685 Bordetella bronchiseptica RB50 transcriptional regulator NP_887235.1 720652 D 257310 CDS NP_887236.1 33599676 2663294 721788..722678 1 NC_002927.3 dihydrodipicolinate synthase 722678 dapA 2663294 dapA Bordetella bronchiseptica RB50 dihydrodipicolinate synthase NP_887236.1 721788 D 257310 CDS NP_887237.1 33599677 2662858 722679..723914 1 NC_002927.3 aspartate aminotransferase 723914 aatB 2662858 aatB Bordetella bronchiseptica RB50 aspartate aminotransferase NP_887237.1 722679 D 257310 CDS NP_887238.1 33599678 2663354 723999..724829 1 NC_002927.3 ABC transporter substrate-binding protein 724829 2663354 BB0688 Bordetella bronchiseptica RB50 ABC transporter substrate-binding protein NP_887238.1 723999 D 257310 CDS NP_887239.1 33599679 2663295 724826..725476 1 NC_002927.3 amino acid ABC transporter permease 725476 2663295 BB0689 Bordetella bronchiseptica RB50 amino acid ABC transporter permease NP_887239.1 724826 D 257310 CDS NP_887240.1 33599680 2663304 725476..726255 1 NC_002927.3 arginine ABC transporter ATP-binding protein 726255 2663304 BB0690 Bordetella bronchiseptica RB50 arginine ABC transporter ATP-binding protein NP_887240.1 725476 D 257310 CDS NP_887241.1 33599681 2663676 726252..727490 1 NC_002927.3 peptidase 727490 2663676 BB0691 Bordetella bronchiseptica RB50 peptidase NP_887241.1 726252 D 257310 CDS NP_887242.1 33599682 2663649 727563..728360 1 NC_002927.3 transcriptional regulator 728360 2663649 BB0692 Bordetella bronchiseptica RB50 transcriptional regulator NP_887242.1 727563 D 257310 CDS NP_887243.1 33599683 2663006 728398..729669 1 NC_002927.3 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase 729669 amaB 2663006 amaB Bordetella bronchiseptica RB50 allantoate amidohydrolase NP_887243.1 728398 D 257310 CDS NP_887244.1 33599684 2663309 complement(729666..730940) 1 NC_002927.3 amidase 730940 2663309 BB0694 Bordetella bronchiseptica RB50 amidase NP_887244.1 729666 R 257310 CDS NP_887245.1 33599685 2663237 complement(730949..731875) 1 NC_002927.3 polysaccharide deacetylase 731875 2663237 BB0695 Bordetella bronchiseptica RB50 polysaccharide deacetylase NP_887245.1 730949 R 257310 CDS NP_887246.1 33599686 2663658 complement(731872..732363) 1 NC_002927.3 catalyzes the formation of glyoxylate from (S)-ureidoglycolate; ureidoglycolate hydrolase 732363 allA 2663658 allA Bordetella bronchiseptica RB50 ureidoglycolate hydrolase NP_887246.1 731872 R 257310 CDS NP_887247.1 33599687 2662974 complement(732380..733672) 1 NC_002927.3 hypothetical protein 733672 2662974 BB0697 Bordetella bronchiseptica RB50 hypothetical protein NP_887247.1 732380 R 257310 CDS NP_887248.1 33599688 2662861 complement(733672..734286) 1 NC_002927.3 hypothetical protein 734286 2662861 BB0698 Bordetella bronchiseptica RB50 hypothetical protein NP_887248.1 733672 R 257310 CDS NP_887249.1 33599689 2663241 complement(734349..735395) 1 NC_002927.3 C4-dicarboxylate ABC transporter substrate-binding porotein 735395 2663241 BB0699 Bordetella bronchiseptica RB50 C4-dicarboxylate ABC transporter substrate-binding porotein NP_887249.1 734349 R 257310 CDS NP_887250.1 33599690 2662857 735537..736442 1 NC_002927.3 LysR family transcriptional regulator 736442 2662857 BB0700 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_887250.1 735537 D 257310 CDS NP_887251.1 33599691 2663806 736544..736930 1 NC_002927.3 hypothetical protein 736930 2663806 BB0701 Bordetella bronchiseptica RB50 hypothetical protein NP_887251.1 736544 D 257310 CDS NP_887252.1 33599692 2662988 complement(736927..737610) 1 NC_002927.3 GntR family transcriptional regulator 737610 2662988 BB0702 Bordetella bronchiseptica RB50 GntR family transcriptional regulator NP_887252.1 736927 R 257310 CDS NP_887253.1 33599693 2663188 737882..738367 1 NC_002927.3 hypothetical protein 738367 2663188 BB0703 Bordetella bronchiseptica RB50 hypothetical protein NP_887253.1 737882 D 257310 CDS NP_887254.1 33599694 2662828 738467..738991 1 NC_002927.3 hypothetical protein 738991 2662828 BB0704 Bordetella bronchiseptica RB50 hypothetical protein NP_887254.1 738467 D 257310 CDS NP_887255.1 33599695 2663864 738988..740343 1 NC_002927.3 hypothetical protein 740343 2663864 BB0705 Bordetella bronchiseptica RB50 hypothetical protein NP_887255.1 738988 D 257310 CDS NP_887256.1 33599696 2662728 740384..741508 1 NC_002927.3 C4-dicarboxylate ABC transporter substrate-binding protein 741508 2662728 BB0706 Bordetella bronchiseptica RB50 C4-dicarboxylate ABC transporter substrate-binding protein NP_887256.1 740384 D 257310 CDS NP_887257.1 33599697 2663027 741557..743065 1 NC_002927.3 GntR family transcriptional regulator 743065 2663027 BB0707 Bordetella bronchiseptica RB50 GntR family transcriptional regulator NP_887257.1 741557 D 257310 CDS NP_887258.1 33599698 2663126 complement(743080..744372) 1 NC_002927.3 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 744372 glyA 2663126 glyA Bordetella bronchiseptica RB50 serine hydroxymethyltransferase NP_887258.1 743080 R 257310 CDS NP_887259.1 33599699 2663359 complement(744369..745604) 1 NC_002927.3 benzoate membrane transport protein 745604 benE 2663359 benE Bordetella bronchiseptica RB50 benzoate membrane transport protein NP_887259.1 744369 R 257310 CDS NP_887260.1 33599700 2662921 745843..746307 1 NC_002927.3 oxidoreductase 746307 2662921 BB0710 Bordetella bronchiseptica RB50 oxidoreductase NP_887260.1 745843 D 257310 CDS NP_887261.1 33599701 2663670 746304..748655 1 NC_002927.3 aldehyde dehydrogenase 748655 2663670 BB0711 Bordetella bronchiseptica RB50 aldehyde dehydrogenase NP_887261.1 746304 D 257310 CDS NP_887262.1 33599702 2662889 748724..749674 1 NC_002927.3 LysR family transcriptional regulator 749674 2662889 BB0712 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_887262.1 748724 D 257310 CDS NP_887263.1 33599703 2663259 complement(749671..750381) 1 NC_002927.3 transcriptional regulator 750381 2663259 BB0713 Bordetella bronchiseptica RB50 transcriptional regulator NP_887263.1 749671 R 257310 CDS NP_887264.1 33599704 2662888 750474..751472 1 NC_002927.3 Similar to Rhodospirillum rubrum 3-hydroxy-3-methylglutaryl-CoA lyase HmgL SWALL:P95639 (EMBL:U41280) (303 aa) fasta scores: E(): 7.9e-37, 42.43% id in 304 aa, and to Bacillus halodurans hydroxymethylglutaryl-CoA lyase Bh1134 SWALL:Q9KDS7 (EMBL:AP001511) (303 aa) fasta scores: E(): 4e-38, 39.4% id in 302 aa; 3-hydroxy-3-methylglutaryl-CoA lyase 751472 hmgL 2662888 hmgL Bordetella bronchiseptica RB50 3-hydroxy-3-methylglutaryl-CoA lyase NP_887264.1 750474 D 257310 CDS NP_887265.1 33599705 2662720 751469..752653 1 NC_002927.3 Similar to Ralstonia solanacearum hypothetical protein Rsp1421 or Rs03121 SWALL:Q8XQ65 (EMBL:AL646084) (383 aa) fasta scores: E(): 6e-80, 55.87% id in 383 aa, and to Rhizobium meliloti conserved membrane-anchored protein Rb0848 or Smb21182 SWALL:Q92V66 (EMBL:AL603645) (394 aa) fasta scores: E(): 9.4e-47, 39.58% id in 384 aa; hypothetical protein 752653 2662720 BB0715 Bordetella bronchiseptica RB50 hypothetical protein NP_887265.1 751469 D 257310 CDS NP_887266.1 33599706 2662721 752650..753318 1 NC_002927.3 Similar to Caulobacter crescentus isochorismatase family protein Cc1170 SWALL:Q9A924 (EMBL:AE005795) (209 aa) fasta scores: E(): 5.4e-17, 35.54% id in 211 aa, and to Thermoplasma volcanium isochorismatase Tv0543 or Tvg0534221 SWALL:Q97BB4 (EMBL:AP000992) (208 aa) fasta scores: E(): 2.1e-10, 24.88% id in 209 aa; isochorismatase 753318 2662721 BB0716 Bordetella bronchiseptica RB50 isochorismatase NP_887266.1 752650 D 257310 CDS NP_887267.1 33599707 2662999 753332..754312 1 NC_002927.3 Similar to Comamonas testosteroni OrfJ protein SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 8e-34, 39.48% id in 309 aa, and to Rhizobium meliloti hypothetical protein Ra1058 or Sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 1.5e-35, 38.15% id in 304 aa; hypothetical protein 754312 2662999 BB0717 Bordetella bronchiseptica RB50 hypothetical protein NP_887267.1 753332 D 257310 CDS NP_887268.1 33599708 2663439 754309..755286 1 NC_002927.3 Similar to Streptomyces hygroscopicus carboxyvinyl-carboxyphosphonate phosphorylmutase BcpA SWALL:CPPM_STRHY (SWALL:P11435) (294 aa) fasta scores: E(): 2.5e-40, 44.75% id in 286 aa, and to Anabaena sp. carboxyphosphonoenolpyruvate phosphonomutase All1863 SWALL:Q8YVW0 (EMBL:AP003587) (287 aa) fasta scores: E(): 1.4e-40, 43.4% id in 288 aa; carboxyvinyl-carboxyphosphonate phosphorylmutase 755286 bcpA 2663439 bcpA Bordetella bronchiseptica RB50 carboxyvinyl-carboxyphosphonate phosphorylmutase NP_887268.1 754309 D 257310 CDS NP_887269.1 33599709 2663203 755365..756345 1 NC_002927.3 Similar to Rhizobium meliloti ABC transporter periplasmic substrate-binding protein Rb0039 or Smb20036 SWALL:Q92XC3 (EMBL:AL603642) (338 aa) fasta scores: E(): 3.3e-10, 24.85% id in 338 aa, and to Fusobacterium nucleatum N-acetylneuraminate-binding protein Fn1472 SWALL:Q8RDN9 (EMBL:AE010653) (327 aa) fasta scores: E(): 5e-09, 25% id in 332 aa; ABC transporter substrate-binding protein 756345 2663203 BB0719 Bordetella bronchiseptica RB50 ABC transporter substrate-binding protein NP_887269.1 755365 D 257310 CDS NP_887270.1 33599710 2663461 756364..756888 1 NC_002927.3 Similar to Rhizobium meliloti hypothetical protein Rb0359 or Smb20373 SWALL:Q92WI0 (EMBL:AL603643) (155 aa) fasta scores: E(): 0.00049, 31.57% id in 152 aa, and to Halomonas elongata small transmembrane protein TeaB SWALL:Q8VPB2 (EMBL:AY061646) (201 aa) fasta scores: E(): 0.00084, 26.7% id in 161 aa; hypothetical protein 756888 2663461 BB0720 Bordetella bronchiseptica RB50 hypothetical protein NP_887270.1 756364 D 257310 CDS NP_887271.1 33599711 2663643 756890..758182 1 NC_002927.3 Similar to Agrobacterium tumefaciens transmembrane protein DctM SWALL:Q9F7C8 (EMBL:AF282677) (416 aa) fasta scores: E(): 4e-51, 40.97% id in 410 aa, and to Pasteurella multocida hypothetical protein Pm1527 SWALL:Q9CKS9 (EMBL:AE006189) (442 aa) fasta scores: E(): 6.5e-44, 35.51% id in 428 aa; hypothetical protein 758182 2663643 BB0721 Bordetella bronchiseptica RB50 hypothetical protein NP_887271.1 756890 D 257310 CDS NP_887272.1 33599712 2662712 758187..759104 1 NC_002927.3 Similar to Xylella fastidiosa hypothetical protein Xf1742 SWALL:Q9PCN6 (EMBL:AE003997) (356 aa) fasta scores: E(): 3.7e-15, 29.96% id in 307 aa, and to Xanthomonas axonopodis gluconolactonase Xac0887 SWALL:AAM35775 (EMBL:AE011720) (286 aa) fasta scores: E(): 7.3e-15, 29.5% id in 261 aa; hypothetical protein 759104 2662712 BB0722 Bordetella bronchiseptica RB50 hypothetical protein NP_887272.1 758187 D 257310 CDS NP_887273.1 33599713 2663057 759101..759421 1 NC_002927.3 Similar to Escherichia coli O157:H7 hypothetical protein Z0890 or Ecs0759 SWALL:Q8X998 (EMBL:AE005251) (105 aa) fasta scores: E(): 7.3e-15, 46.46% id in 99 aa; hypothetical protein 759421 2663057 BB0723 Bordetella bronchiseptica RB50 hypothetical protein NP_887273.1 759101 D 257310 CDS NP_887274.1 33599714 2662846 759418..760839 1 NC_002927.3 Similar to Escherichia coli O157:H7 hypothetical protein Z0891 or Ecs0760 SWALL:Q8X991 (EMBL:AE005251) (456 aa) fasta scores: E(): 5.5e-59, 37.96% id in 453 aa; hypothetical protein 760839 2662846 BB0724 Bordetella bronchiseptica RB50 hypothetical protein NP_887274.1 759418 D 257310 CDS NP_887275.1 33599715 2662800 complement(760870..761646) 1 NC_002927.3 Similar to Agrobacterium tumefaciens transcriptional regulator SWALL:Q9F7C7 (EMBL:AF282677) (260 aa) fasta scores: E(): 1.7e-15, 30.73% id in 257 aa, and to Streptomyces coelicolor IclR-family regulatory protein Sco0574 or Sc5g5.06 SWALL:Q93RZ6 (EMBL:AL591823) (277 aa) fasta scores: E(): 1.5e-15, 31.71% id in 227 aa; transcriptional regulator 761646 2662800 BB0725 Bordetella bronchiseptica RB50 transcriptional regulator NP_887275.1 760870 R 257310 CDS NP_887276.1 33599716 2663338 761810..762784 1 NC_002927.3 Similar to Rhizobium meliloti hypothetical protein Ra1058 or Sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 1.4e-36, 36.42% id in 324 aa, and to Comamonas testosteroni OrfJ protein SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 8.2e-30, 35.22% id in 335 aa; hypothetical protein 762784 2663338 BB0726 Bordetella bronchiseptica RB50 hypothetical protein NP_887276.1 761810 D 257310 CDS NP_887277.1 33599717 2662822 762806..763807 1 NC_002927.3 Similar to Pseudomonas putida toluate 1,2-dioxygenase electron transfer component [includes: ferredoxin; ferredoxin--NAD(+) reductase] xylZ SWALL:XYLZ_PSEPU (SWALL:P23101) (336 aa) fasta scores: E(): 3.2e-31, 34.25% id in 327 aa, and to Burkholderia sp. NK8 electron transfer component of chlorobenzoate 1,2-dioxygenase CbeC SWALL:Q9AQS2 (EMBL:AB024746) (342 aa) fasta scores: E(): 2.1e-31, 35.41% id in 336 aa; electron transfer component of a dioxygenase system 763807 2662822 BB0727 Bordetella bronchiseptica RB50 electron transfer component of a dioxygenase system NP_887277.1 762806 D 257310 CDS NP_887278.1 33599718 2663803 763822..765186 1 NC_002927.3 Similar to Escherichia coli and Escherichia coli O157:H7 3-phenylpropionate dioxygenase alpha subunit HcaE or PhdC1 or HcaA or HcaA1 or DigA or b2538 or z3809 or ecs3404 SWALL:HCAE_ECOLI (SWALL:Q47139) (453 aa) fasta scores: E(): 3.8e-63, 38.2% id in 445 aa, and to Sphingomonas sp ring-hydroxylating dioxygenase, large subunit SWALL:O86913 (EMBL:AJ223220) (416 aa) fasta scores: E(): 4.4e-79, 48.44% id in 386 aa; hydroxylating alpha subunit of a dioxygenase system 765186 hcaE 2663803 hcaE Bordetella bronchiseptica RB50 hydroxylating alpha subunit of a dioxygenase system NP_887278.1 763822 D 257310 CDS NP_887279.1 33599719 2663033 765183..766022 1 NC_002927.3 Similar to Rhizobium etli short chain type dehydrogenase reductase Yp008 SWALL:AAM54803 (EMBL:U80928) (280 aa) fasta scores: E(): 1.1e-17, 37.27% id in 279 aa, and to Ralstonia solanacearum probable toluenesulfonate zinc-independent alcohol dehydrogenase oxidoreductase TsaC or rsc2351 or rs01195 SWALL:Q8XWW9 (EMBL:AL646069) (252 aa) fasta scores: E(): 4.5e-18, 36.82% id in 258 aa; short chain dehydrogenase 766022 2663033 BB0729 Bordetella bronchiseptica RB50 short chain dehydrogenase NP_887279.1 765183 D 257310 CDS NP_887280.1 33599720 2663617 766015..766599 1 NC_002927.3 Similar to Pseudomonas putida benzene 1,2-dioxygenase beta subunit bedc2 SWALL:BED2_PSEPU (SWALL:Q07945) (187 aa) fasta scores: E(): 1.9e-17, 36.99% id in 173 aa, and to Rhodococcus erythropolis isopropylbenzene 2,3-dioxygenase ipba2 SWALL:P72257 (EMBL:U24277) (187 aa) fasta scores: E(): 2.1e-18, 36.31% id in 190 aa; 3-phenylpropionate dioxygenase subunit beta 766599 2663617 BB0730 Bordetella bronchiseptica RB50 3-phenylpropionate dioxygenase subunit beta NP_887280.1 766015 D 257310 CDS NP_887281.1 33599721 2663500 766609..766797 1 NC_002927.3 no significant database matches; hypothetical protein 766797 2663500 BB0731 Bordetella bronchiseptica RB50 hypothetical protein NP_887281.1 766609 D 257310 CDS NP_887282.1 33599722 2663504 766922..768568 1 NC_002927.3 Similar to Pseudomonas putida FAD-monooxygenase CadA SWALL:Q93AG2 (EMBL:AF421356) (553 aa) fasta scores: E(): 1e-121, 56.37% id in 541 aa, and to Nocardia aerocolonigenes monooxygenase SWALL:CAC93716 (EMBL:AJ414559) (529 aa) fasta scores: E(): 3.8e-36, 34.18% id in 550 aa; hypothetical protein 768568 cadA 2663504 cadA Bordetella bronchiseptica RB50 hypothetical protein NP_887282.1 766922 D 257310 CDS NP_887283.1 33599723 2663112 768609..769574 1 NC_002927.3 Similar to Agrobacterium tumefaciens hypothetical protein Atu4727 or Agr_l_312 SWALL:Q8U6S9 (EMBL:AE009401) (329 aa) fasta scores: E(): 1.3e-46, 46.68% id in 317 aa, and to Comamonas testosteroni OrfJ protein SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 6.3e-37, 37.53% id in 325 aa; hypothetical protein 769574 2663112 BB0733 Bordetella bronchiseptica RB50 hypothetical protein NP_887283.1 768609 D 257310 CDS NP_887284.1 33599724 2663717 769619..770293 1 NC_002927.3 Similar to the N-terminal region of Escherichia coli 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase HpaG SWALL:HPAG_ECOLI (SWALL:Q46978) (429 aa) fasta scores: E(): 2.9e-20, 37.25% id in 204 aa, and similar to Pseudomonas aeruginosa hypothetical protein Pa4121 SWALL:Q9HWR0 (EMBL:AE004828) (219 aa) fasta scores: E(): 7.1e-22, 37.25% id in 204 aa; fumarylacetoacetate hydrolase family protein 770293 hpaG 2663717 hpaG Bordetella bronchiseptica RB50 fumarylacetoacetate hydrolase family protein NP_887284.1 769619 D 257310 CDS NP_887285.1 33599725 2663120 770290..771057 1 NC_002927.3 Similar to the N-terminal region of Escherichia coli 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase HpaG SWALL:HPAG_ECOLI (SWALL:Q46978) (429 aa) fasta scores: E(): 1.3e-42, 57.82% id in 211 aa, and to Pseudomonas aeruginosa hypothetical protein Pa4122 SWALL:Q9HWQ9 (EMBL:AE004828) (259 aa) fasta scores: E(): 9.6e-58, 58.98% id in 256 aa; fumarylacetoacetate hydrolase family protein 771057 2663120 BB0735 Bordetella bronchiseptica RB50 fumarylacetoacetate hydrolase family protein NP_887285.1 770290 D 257310 CDS NP_887286.1 33599726 2663091 771067..772536 1 NC_002927.3 Similar to Escherichia coli 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase HpaE SWALL:Q46979 (EMBL:Z37980) (488 aa) fasta scores: E(): 7.9e-133, 67.82% id in 488 aa, and to Salmonella typhimurium 4-hydroxyphenylacetate catabolism HpaE or Stm1102 SWALL:Q8ZQ48 (EMBL:AE008747) (488 aa) fasta scores: E(): 2.5e-133, 68.03% id in 488 aa; 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase 772536 hpaE 2663091 hpaE Bordetella bronchiseptica RB50 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase NP_887286.1 771067 D 257310 CDS NP_887287.1 33599727 2663735 772533..773402 1 NC_002927.3 Similar to Pseudomonas sp. DJ-12 homoprotocatechuate 2,3-dioxygenase HpaD SWALL:Q93A27 (EMBL:AF433158) (287 aa) fasta scores: E(): 1.8e-101, 80.35% id in 285 aa, and to Escherichia coli 3,4-dihydroxyphenylacetate 2,3-dioxygenase HpaD SWALL:Q46980 (EMBL:Z37980) (282 aa) fasta scores: E(): 8.1e-78, 66.54% id in 281 aa; homoprotocatechuate 2,3-dioxygenase 773402 hpaD 2663735 hpaD Bordetella bronchiseptica RB50 homoprotocatechuate 2,3-dioxygenase NP_887287.1 772533 D 257310 CDS NP_887288.1 33599728 2663784 773404..773841 1 NC_002927.3 Similar to Escherichia coli 5-carboxymethyl-2-hydroxymuconate delta-isomerase HpaF SWALL:Q46981 (EMBL:Z37980) (125 aa) fasta scores: E(): 0.008, 25.71% id in 140 aa, and to Deinococcus radiodurans 5-carboxymethyl-2-hydroxymuconate isomerase Dra0227 SWALL:Q9RYT1 (EMBL:AE001863) (128 aa) fasta scores: E(): 0.00078, 31.69% id in 142 aa; 5-carboxymethyl-2-hydroxymuconate delta-isomerase 773841 hpaF 2663784 hpaF Bordetella bronchiseptica RB50 5-carboxymethyl-2-hydroxymuconate delta-isomerase NP_887288.1 773404 D 257310 CDS NP_887289.1 33599729 2663084 773841..774656 1 NC_002927.3 Similar to Rhodococcus sp 2-oxo-hepta-3-ene-1,7-dioic acid hydratase BphE or EtbE SWALL:O05150 (EMBL:D78322) (267 aa) fasta scores: E(): 3.6e-61, 61.11% id in 270 aa, and to Escherichia coli 2-oxo-hepta-3-ene-1,7-dioic acid hydratase HpcG SWALL:HPCG_ECOLI (SWALL:P42270) (264 aa) fasta scores: E(): 2e-52, 56.27% id in 263 aa; 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 774656 hpcG 2663084 hpcG Bordetella bronchiseptica RB50 2-oxo-hepta-3-ene-1,7-dioic acid hydratase NP_887289.1 773841 D 257310 CDS NP_887290.1 33599730 2663079 774659..775468 1 NC_002927.3 Similar to Escherichia coli 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase HpcH or HpaI SWALL:HPAI_ECOLI (SWALL:Q47098) (262 aa) fasta scores: E(): 4.3e-60, 64.88% id in 262 aa, and to Deinococcus radiodurans 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase Dra0291 SWALL:Q9RYM1 (EMBL:AE001863) (277 aa) fasta scores: E(): 1.1e-65, 67.39% id in 273 aa; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 775468 hpaI 2663079 hpaI Bordetella bronchiseptica RB50 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase NP_887290.1 774659 D 257310 CDS NP_887291.1 33599731 2663086 775542..776456 1 NC_002927.3 Similar to Comamonas testosteroni TsaR SWALL:P94678 (EMBL:U32622) (298 aa) fasta scores: E(): 1.8e-19, 31.72% id in 290 aa, and to Escherichia coli transcriptional regulator AbgR or b1339 SWALL:ABGR_ECOLI (SWALL:P77744) (302 aa) fasta scores: E(): 4.3e-19, 26.78% id in 295 aa; LysR family transcriptional regulator 776456 2663086 BB0741 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_887291.1 775542 D 257310 CDS NP_887292.1 33599732 2663592 776599..777576 1 NC_002927.3 Similar to Rhizobium meliloti hypothetical protein Ra1058 or Sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 2.2e-34, 38.94% id in 303 aa, and to Comamonas testosteroni OrfJ protein SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 4.4e-33, 36.47% id in 318 aa; hypothetical protein 777576 2663592 BB0742 Bordetella bronchiseptica RB50 hypothetical protein NP_887292.1 776599 D 257310 CDS NP_887293.1 33599733 2663518 777604..779280 1 NC_002927.3 Similar to Citrobacter freundii valine-sensitive acetohydroxy acid synthase SWALL:P94783 (EMBL:D89674) (561 aa) fasta scores: E(): 5.2e-35, 30.03% id in 536 aa, and to Rhizobium meliloti acetolactate synthase isozyme I large subunit protein IlvB1 or r00567 or smc02263 SWALL:Q92S59 (EMBL:AL591784) (537 aa) fasta scores: E(): 3.6e-42, 35.49% id in 541 aa; hypothetical protein 779280 2663518 BB0743 Bordetella bronchiseptica RB50 hypothetical protein NP_887293.1 777604 D 257310 CDS NP_887294.1 33599734 2663835 779277..780716 1 NC_002927.3 Similar to Rhodococcus ruber 6-oxolauric acid dehydrogenase CddD SWALL:Q938F1 (EMBL:AY052630) (474 aa) fasta scores: E(): 1.9e-68, 43.46% id in 474 aa, and to Deinococcus radiodurans aldehyde dehydrogenase Dra0126 SWALL:Q9RZ27 (EMBL:AE001862) (495 aa) fasta scores: E(): 7.5e-68, 46.48% id in 469 aa; aldehyde dehydrogenase 780716 2663835 BB0744 Bordetella bronchiseptica RB50 aldehyde dehydrogenase NP_887294.1 779277 D 257310 CDS NP_887295.1 33599735 2659782 780822..781784 1 NC_002927.3 Similar to Pseudomonas sp. lipase LipP SWALL:O52270 (EMBL:AF034088) (308 aa) fasta scores: E(): 8.7e-33, 41.4% id in 285 aa, and to Mycobacterium tuberculosis carboxylesterase family protein rv1399c or mtcy21b4.16c or mt1443 SWALL:P71667 (EMBL:Z80108) (319 aa) fasta scores: E(): 5.1e-33, 44.89% id in 274 aa; lipase 781784 2659782 BB0745 Bordetella bronchiseptica RB50 lipase NP_887295.1 780822 D 257310 CDS NP_887296.1 33599736 2659783 complement(781795..782400) 1 NC_002927.3 Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa4987 SWALL:Q9HUH8 (EMBL:AE004911) (199 aa) fasta scores: E(): 4.2e-15, 35.29% id in 187 aa, and to Rhizobium loti hypothetical protein Mll7669 SWALL:Q985H7 (EMBL:AP003012) (205 aa) fasta scores: E(): 1.6e-11, 33.15% id in 190 aa; transcriptional regulator 782400 2659783 BB0746 Bordetella bronchiseptica RB50 transcriptional regulator NP_887296.1 781795 R 257310 CDS NP_887297.1 33599737 2659795 complement(782421..783422) 1 NC_002927.3 Similar to Variovorax paradoxus, and Burkholderia cepacia 2,4-diphenoxyacetic acid gene cluster SWALL:Q9RHQ7 (EMBL:AB028643) (337 aa) fasta scores: E(): 6.1e-38, 40.38% id in 312 aa, and to Rhizobium meliloti hypothetical protein Ra1058 or Sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 1.8e-40, 41.87% id in 320 aa; hypothetical protein 783422 2659795 BB0747 Bordetella bronchiseptica RB50 hypothetical protein NP_887297.1 782421 R 257310 CDS NP_887298.1 33599738 2659820 783714..784088 1 NC_002927.3 Weakly similar to Escherichia coli O157:H7 z3937 protein z3937 or ecs3506 SWALL:Q8X978 (EMBL:AE005493) (131 aa) fasta scores: E(): 0.22, 27.61% id in 105 aa; hypothetical protein 784088 2659820 BB0748 Bordetella bronchiseptica RB50 hypothetical protein NP_887298.1 783714 D 257310 CDS NP_887299.1 33599739 2659838 784138..784476 1 NC_002927.3 Similar to Mycobacterium tuberculosis hypothetical 10.8 kDa protein rv1214c or mtci364.26c or mt1252 SWALL:O05315 (EMBL:Z93777) (110 aa) fasta scores: E(): 7.2, 28.44% id in 109 aa; lipoprotein 784476 2659838 BB0749 Bordetella bronchiseptica RB50 lipoprotein NP_887299.1 784138 D 257310 CDS NP_887300.1 33599740 2659843 complement(784486..785295) 1 NC_002927.3 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 785295 2659843 BB0750 Bordetella bronchiseptica RB50 enoyl-CoA hydratase NP_887300.1 784486 R 257310 CDS NP_887301.1 33599741 2659862 complement(785331..786146) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3187; Similar to Cavia sp peroxisomal trans 2-enoyl CoA reductase SWALL:Q9JIF5 (EMBL:AF232010) (302 aa) fasta scores: E(): 3.4e-26, 39.92% id in 253 aa, and to Rattus norvegicus short-chain dehydrogenase/reductase MrnA, complete cds SWALL:Q9WVK3 (EMBL:AF099742) (303 aa) fasta scores: E(): 6.3e-27, 39.14% id in 258 aa; short-chain dehydrogenase 786146 2659862 BB0751 Bordetella bronchiseptica RB50 short-chain dehydrogenase NP_887301.1 785331 R 257310 CDS NP_887302.1 33599742 2659883 complement(786193..787287) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3188; Similar to Streptomyces coelicolor hypothetical protein sco2032 or sc3a3.10 SWALL:Q9S2Y3 (EMBL:AL109849) (404 aa) fasta scores: E(): 7.9e-21, 33.93% id in 330 aa, and to Rhizobium loti hypothetical protein Mlr6096 SWALL:Q98A97 (EMBL:AP003008) (387 aa) fasta scores: E(): 1.6e-19, 32.78% id in 305 aa; hypothetical protein 787287 2659883 BB0752 Bordetella bronchiseptica RB50 hypothetical protein NP_887302.1 786193 R 257310 CDS NP_887303.1 33599743 2659925 complement(787280..788614) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3189; Similar to Archaeoglobus fulgidus coenzyme F390 synthetase af2013 SWALL:O28266 (EMBL:AE000964) (440 aa) fasta scores: E(): 8e-55, 39.18% id in 444 aa, and to Methanosarcina acetivorans coenzyme A ligase ma2244 SWALL:Q8TNN9 (EMBL:AE010911) (433 aa) fasta scores: E(): 1.7e-47, 37.81% id in 439 aa; coenzyme A ligase 788614 2659925 BB0753 Bordetella bronchiseptica RB50 coenzyme A ligase NP_887303.1 787280 R 257310 CDS NP_887304.1 33599744 2659908 complement(788568..789251) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3190; Similar to Bacillus halodurans transcriptional regulator bh2958 SWALL:Q9K8P5 (EMBL:AP001517) (215 aa) fasta scores: E(): 5.2e-09, 24.73% id in 190 aa, and to Deinococcus radiodurans transcriptional regulator, tetr family dr2376 SWALL:Q9RRV9 (EMBL:AE002068) (197 aa) fasta scores: E(): 5.1e-08, 27.97% id in 193 aa; TetR family transcriptional regulator 789251 2659908 BB0754 Bordetella bronchiseptica RB50 TetR family transcriptional regulator NP_887304.1 788568 R 257310 CDS NP_887305.1 33599745 2659610 complement(789277..790440) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3191; Similar to Thermoanaerobacter tengcongensis acyl-CoA dehydrogenases CaiA or tte0545 SWALL:Q8RC91 (EMBL:AE013024) (380 aa) fasta scores: E(): 2.7e-50, 40.1% id in 379 aa, and to Pseudomonas aeruginosa probable acyl-CoA dehydrogenase pa2552 SWALL:Q9I0T2 (EMBL:AE004683) (375 aa) fasta scores: E(): 2.7e-49, 40.22% id in 363 aa; acyl-CoA dehyrdogenase 790440 2659610 BB0755 Bordetella bronchiseptica RB50 acyl-CoA dehyrdogenase NP_887305.1 789277 R 257310 CDS NP_887306.1 33599746 2660507 complement(790437..791438) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3192; Similar to Deinococcus radiodurans branched-chain amino acid ABC transporter permease Dr0282 SWALL:Q9RXM8 (EMBL:AE001889) (334 aa) fasta scores: E(): 2.3e-21, 31.77% id in 321 aa, and to Archaeoglobus fulgidus branched-chain amino acid ABC transporter permease Af0824 SWALL:O29434 (EMBL:AE001047) (323 aa) fasta scores: E(): 4.6e-21, 28.57% id in 294 aa; branched-chain amino acid ABC transporter permease 791438 2660507 BB0756 Bordetella bronchiseptica RB50 branched-chain amino acid ABC transporter permease NP_887306.1 790437 R 257310 CDS NP_887307.1 33599747 2660521 complement(791438..792310) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3193; Similar to Deinococcus radiodurans branched-chain amino acid ABC transporter permease dr0281 SWALL:Q9RXM9 (EMBL:AE001889) (285 aa) fasta scores: E(): 1.8e-25, 31.57% id in 285 aa, and to Brucella melitensis high-affinity branched-chain amino acid transport system permease livh / high-affinity branched-chain amino acid transport ATP-binding protein livg bmeii0874 SWALL:Q8YBM5 (EMBL:AE009721) (916 aa) fasta scores: E(): 1.3e-26, 34.5% id in 284 aa; branched-chain amino acid ABC transporter permease 792310 2660521 BB0757 Bordetella bronchiseptica RB50 branched-chain amino acid ABC transporter permease NP_887307.1 791438 R 257310 CDS NP_887308.1 33599748 2660593 complement(792307..793056) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3194; Similar to Deinococcus radiodurans branched-chain amino acid ABC transporter ATP-binding protein dra0260 SWALL:Q9RYP9 (EMBL:AE001863) (238 aa) fasta scores: E(): 4.8e-30, 49.19% id in 248 aa, and to Ralstonia solanacearum probable amino-acid composite ATP-binding transmembrane ABC transporter protein rsp0707 or rs01742 SWALL:Q8XRX4 (EMBL:AL646080) (247 aa) fasta scores: E(): 5e-30, 45.37% id in 238 aa; branched-chain amino acid ABC transporter ATP-binding protein 793056 2660593 BB0758 Bordetella bronchiseptica RB50 branched-chain amino acid ABC transporter ATP-binding protein NP_887308.1 792307 R 257310 CDS NP_887309.1 33599749 2658950 complement(793053..793844) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3195; ABC transporter ATP-binding protein 793844 2658950 BB0759 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_887309.1 793053 R 257310 CDS NP_887310.1 33599750 2661119 complement(793841..794980) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3196; Similar to Citrobacter freundii leu/ile/val-binding protein precursor LivJ SWALL:LIVJ_CITFR (SWALL:P25399) (367 aa) fasta scores: E(): 2.4e-14, 28.41% id in 359 aa, and to Rhizobium loti ABC transporter binding protein mlr7721 SWALL:Q985D9 (EMBL:AP003012) (399 aa) fasta scores: E(): 4e-17, 26.68% id in 371 aa; branched-chain amino acid ABC transporter binding protein 794980 2661119 BB0761 Bordetella bronchiseptica RB50 branched-chain amino acid ABC transporter binding protein NP_887310.1 793841 R 257310 CDS NP_887311.1 33599751 2660286 795305..796072 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3197; Similar to Bos taurus 3-hydroxyacyl-CoA dehydrogenase type II HadH2 SWALL:HCD2_BOVIN (SWALL:O02691) (261 aa) fasta scores: E(): 4e-41, 52.17% id in 253 aa, and to Mycobacterium tuberculosis oxidoreductase, short-chain dehydrogenase/reductase family rv1144 or mtci65.11 or mt1177 SWALL:O06544 (EMBL:Z95584) (250 aa) fasta scores: E(): 4.8e-47, 58.98% id in 256 aa; short chain dehydrogenase 796072 2660286 BB0762 Bordetella bronchiseptica RB50 short chain dehydrogenase NP_887311.1 795305 D 257310 CDS NP_887312.1 33599752 2661252 796105..796887 1 NC_002927.3 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 796887 2661252 BB0763 Bordetella bronchiseptica RB50 enoyl-CoA hydratase NP_887312.1 796105 D 257310 CDS NP_887313.1 33599753 2662092 796891..797280 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3199; Similar to Archaeoglobus fulgidus hypothetical protein Af1292 SWALL:O28977 (EMBL:AE001015) (136 aa) fasta scores: E(): 5.3e-05, 31.62% id in 117 aa, and to Methanopyrus kandleri predicted nucleic-acid-binding protein containing a zn-ribbon mk1377 SWALL:Q8TVL2 (EMBL:AE010431) (134 aa) fasta scores: E(): 0.0002, 33.02% id in 109 aa; hypothetical protein 797280 2662092 BB0764 Bordetella bronchiseptica RB50 hypothetical protein NP_887313.1 796891 D 257310 CDS NP_887314.1 33599754 2661866 797277..798428 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3200; Similar to Rhodococcus sp. NCIMB 9784 non-specific lipid carrier-like protein CampC SWALL:Q93TU4 (EMBL:AF323755) (408 aa) fasta scores: E(): 3.7e-23, 31% id in 387 aa, and to Pseudomonas aeruginosa hypothetical protein Pa1016 SWALL:Q9I4V7 (EMBL:AE004534) (383 aa) fasta scores: E(): 1.2e-90, 62.14% id in 383 aa; thiolase 798428 2661866 BB0765 Bordetella bronchiseptica RB50 thiolase NP_887314.1 797277 D 257310 CDS NP_887315.1 33599755 2661781 798425..799300 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3201; Similar to Pseudomonas aeruginosa PhaJ2 or pa1018 SWALL:Q9LBK1 (EMBL:AB040026) (288 aa) fasta scores: E(): 8.9e-40, 46.45% id in 282 aa, and to Mycobacterium tuberculosis maoc family protein rv3389c or mtv004.47c or mt3496 SWALL:Q11198 (EMBL:U27357) (290 aa) fasta scores: E(): 1e-31, 41.61% id in 298 aa; hydratase 799300 2661781 BB0766 Bordetella bronchiseptica RB50 hydratase NP_887315.1 798425 D 257310 CDS NP_887316.1 33599756 2660257 799336..800424 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3202; Similar to Xanthomonas campestris hypothetical protein Xcc2124 SWALL:AAM41409 (EMBL:AE012319) (354 aa) fasta scores: E(): 1.3e-28, 32.7% id in 370 aa, and to Arabidopsis thaliana hypothetical 44.2 kDa protein t22a6.50 or at4g24220 or at4g24220, t22a6.50 SWALL:Q9STX2 (EMBL:AL078637) (388 aa) fasta scores: E(): 1.3e-17, 30.42% id in 378 aa; hypothetical protein 800424 2660257 BB0767 Bordetella bronchiseptica RB50 hypothetical protein NP_887316.1 799336 D 257310 CDS NP_887317.1 33599757 2661756 complement(800458..801438) 1 NC_002927.3 Similar to Comamonas testosteroni OrfJ protein SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 2.2e-40, 39.56% id in 321 aa, and to Rhizobium meliloti hypothetical protein ra1058 ra1058 or sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 5.2e-38, 39.24% id in 316 aa; hypothetical protein 801438 2661756 BB0768 Bordetella bronchiseptica RB50 hypothetical protein NP_887317.1 800458 R 257310 CDS NP_887318.1 33599758 2661662 complement(801540..802562) 1 NC_002927.3 Similar to Streptomyces coelicolor hypothetical protein sco6307 or scif3.09C SWALL:Q93RT4 (EMBL:AL590982) (320 aa) fasta scores: E(): 6.7e-06, 30.83% id in 334 aa, and to Arthrobacter nicotinovorans hypothetical polyketide cyclase SWALL:Q93NG4 (EMBL:AF373840) (310 aa) fasta scores: E(): 0.0014, 30.26% id in 337 aa; hypothetical protein 802562 2661662 BB0769 Bordetella bronchiseptica RB50 hypothetical protein NP_887318.1 801540 R 257310 CDS NP_887319.1 33599759 2661710 complement(802844..803641) 1 NC_002927.3 Similar to Ralstonia solanacearum probable transcription regulator protein rsc3411 or rs01720 SWALL:Q8XTY4 (EMBL:AL646075) (262 aa) fasta scores: E(): 5.1e-31, 42% id in 250 aa, and to Rhodococcus opacus PcaR pcaR SWALL:O67983 (EMBL:AF003947) (265 aa) fasta scores: E(): 1.3e-20, 36.32% id in 234 aa; transcriptional regulator 803641 2661710 BB0770 Bordetella bronchiseptica RB50 transcriptional regulator NP_887319.1 802844 R 257310 CDS NP_887320.1 33599760 2660135 803770..805077 1 NC_002927.3 Similar to Proteus mirabilis amino acid deaminase AaD SWALL:Q51890 (EMBL:U35383) (473 aa) fasta scores: E(): 1.9e-39, 34.33% id in 431 aa, and to Agrobacterium tumefaciens oxidoreductase AgaE or atu3050 or agr_l_3510 SWALL:Q8UBG6 (EMBL:AE009235) (449 aa) fasta scores: E(): 2.1e-67, 45.54% id in 426 aa; FAD dependent oxidoreductase 805077 2660135 BB0771 Bordetella bronchiseptica RB50 FAD dependent oxidoreductase NP_887320.1 803770 D 257310 CDS NP_887321.1 33599761 2660147 805074..806147 1 NC_002927.3 Similar to Brevibacillus borstelensis thermostable dipeptidase Bdp SWALL:Q9KH70 (EMBL:AF268476) (307 aa) fasta scores: E(): 1.9e-16, 33.69% id in 184 aa, and to Ralstonia solanacearum dipeptidase rsp0056 or rs02031 SWALL:Q8XTQ0 (EMBL:AL646076) (323 aa) fasta scores: E(): 4.6e-33, 37.95% id in 332 aa; dipeptidase 806147 2660147 BB0772 Bordetella bronchiseptica RB50 dipeptidase NP_887321.1 805074 D 257310 CDS NP_887322.1 33599762 2660157 806164..807132 1 NC_002927.3 Similar to Alcaligenes eutrophus hypothetical 35.6 kDa protein in gbd 5'region precursor SWALL:YGB7_ALCEU (SWALL:Q44018) (327 aa) fasta scores: E(): 2e-47, 42.3% id in 312 aa, and to Comamonas testosteroni OrfJ protein SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 4.4e-25, 29.19% id in 322 aa; hypothetical protein 807132 2660157 BB0773 Bordetella bronchiseptica RB50 hypothetical protein NP_887322.1 806164 D 257310 CDS NP_887323.1 33599763 2659355 complement(807255..810914) 1 NC_002927.3 no significant database matches; hypothetical protein 810914 2659355 BB0774 Bordetella bronchiseptica RB50 hypothetical protein NP_887323.1 807255 R 257310 CDS NP_887324.1 33599764 2660168 811043..812113 1 NC_002927.3 Similar to Agrobacterium tumefaciens transcriptional regulator, AraC family atu4132 or agr_l_1441 SWALL:Q8U8G0 (EMBL:AE009344) (347 aa) fasta scores: E(): 1.3e-06, 27.88% id in 269 aa, and to Caulobacter crescentus transcriptional regulator, AraC family cc0713 SWALL:Q9AA93 (EMBL:AE005746) (446 aa) fasta scores: E(): 2.2e-05, 25.42% id in 354 aa; transcriptional regulator 812113 2660168 BB0775 Bordetella bronchiseptica RB50 transcriptional regulator NP_887324.1 811043 D 257310 CDS NP_887325.1 33599765 2661813 complement(812110..812829) 1 NC_002927.3 no significant database matches; hypothetical protein 812829 2661813 BB0776 Bordetella bronchiseptica RB50 hypothetical protein NP_887325.1 812110 R 257310 CDS NP_887326.1 33599766 2659257 complement(812826..814037) 1 NC_002927.3 no significant database matches; hypothetical protein 814037 2659257 BB0777 Bordetella bronchiseptica RB50 hypothetical protein NP_887326.1 812826 R 257310 CDS NP_887327.1 33599767 2661702 complement(814034..815071) 1 NC_002927.3 no significant database matches; hypothetical protein 815071 2661702 BB0778 Bordetella bronchiseptica RB50 hypothetical protein NP_887327.1 814034 R 257310 CDS NP_887328.1 33599768 2661635 complement(815064..817331) 1 NC_002927.3 no significant database matches; hypothetical protein 817331 2661635 BB0779 Bordetella bronchiseptica RB50 hypothetical protein NP_887328.1 815064 R 257310 CDS NP_887329.1 33599769 2661713 complement(817328..818581) 1 NC_002927.3 Similar to Pseudomonas putida type 4 fimbrial assembly protein PilC SWALL:PILC_PSEPU (SWALL:P36641) (401 aa) fasta scores: E(): 7.2e-28, 29.68% id in 411 aa, and to Pseudomonas aeruginosa general secretion pathway protein F XcpS or pa3102 SWALL:GSPF_PSEAE (SWALL:Q00513) (405 aa) fasta scores: E(): 5.1e-27, 27.42% id in 412 aa; type II secretion system protein 818581 2661713 BB0780 Bordetella bronchiseptica RB50 type II secretion system protein NP_887329.1 817328 R 257310 CDS NP_887330.1 33599770 2663812 complement(818578..820203) 1 NC_002927.3 Similar to Pseudomonas putida XcpR protein SWALL:Q52292 (EMBL:X81085) (482 aa) fasta scores: E(): 8.6e-51, 43.21% id in 405 aa, and to Vibrio cholerae general secretion pathway protein E EpsE or vc2732 SWALL:GSPE_VIBCH (SWALL:P37093) (503 aa) fasta scores: E(): 6.2e-50, 38.51% id in 457 aa; type II secretion system protein 820203 2663812 BB0781 Bordetella bronchiseptica RB50 type II secretion system protein NP_887330.1 818578 R 257310 CDS NP_887331.1 33599771 2661696 complement(820271..821650) 1 NC_002927.3 Similar to Aeromonas hydrophila general secretion pathway protein A ExeA SWALL:GSPA_AERHY (SWALL:P45754) (547 aa) fasta scores: E(): 8.2e-19, 37.69% id in 260 aa, and to Vibrio cholerae general secretion pathway protein A vc2445 SWALL:Q9KPC7 (EMBL:AE004314) (529 aa) fasta scores: E(): 5.1e-18, 32.55% id in 301 aa; type II secretion system protein 821650 2661696 BB0782 Bordetella bronchiseptica RB50 type II secretion system protein NP_887331.1 820271 R 257310 CDS NP_887332.1 33599772 2659383 complement(821685..822587) 1 NC_002927.3 no significant database matches; hypothetical protein 822587 2659383 BB0783 Bordetella bronchiseptica RB50 hypothetical protein NP_887332.1 821685 R 257310 CDS NP_887333.1 33599773 2661678 complement(822584..824221) 1 NC_002927.3 Similar to Vibrio cholerae mannose-sensitive hemagglutinin D MshD SWALL:Q56673 (EMBL:L19085) (559 aa) fasta scores: E(): 1.8e-19, 24.1% id in 560 aa, and to Xanthomonas campestris general secretion pathway protein D precursor XpsD or PefD or xcc0670 SWALL:GSPD_XANCP (SWALL:P29041) (759 aa) fasta scores: E(): 3.4e-14, 26.76% id in 426 aa; type II secretion system protein 824221 2661678 BB0784 Bordetella bronchiseptica RB50 type II secretion system protein NP_887333.1 822584 R 257310 CDS NP_887334.1 33599774 2659166 complement(824235..824999) 1 NC_002927.3 no significant database matches; hypothetical protein 824999 2659166 BB0785 Bordetella bronchiseptica RB50 hypothetical protein NP_887334.1 824235 R 257310 CDS NP_887335.1 33599775 2659327 complement(824996..825595) 1 NC_002927.3 no significant database matches; hypothetical protein 825595 2659327 BB0786 Bordetella bronchiseptica RB50 hypothetical protein NP_887335.1 824996 R 257310 CDS NP_887336.1 33599776 2659168 complement(825621..826130) 1 NC_002927.3 no significant database matches; hypothetical protein 826130 2659168 BB0787 Bordetella bronchiseptica RB50 hypothetical protein NP_887336.1 825621 R 257310 CDS NP_887337.1 33599777 2660281 complement(826127..827497) 1 NC_002927.3 no significant database matches; hypothetical protein 827497 2660281 BB0788 Bordetella bronchiseptica RB50 hypothetical protein NP_887337.1 826127 R 257310 CDS NP_887338.1 33599778 2661193 complement(827502..828008) 1 NC_002927.3 no significant database matches; hypothetical protein 828008 2661193 BB0789 Bordetella bronchiseptica RB50 hypothetical protein NP_887338.1 827502 R 257310 CDS NP_887339.1 33599779 2660230 complement(828015..828809) 1 NC_002927.3 Similar to Escherichia coli CFA/III pilin CofA SWALL:Q59393 (EMBL:D37957) (238 aa) fasta scores: E(): 7, 25.74% id in 202 aa, and to Escherichia coli hypothetical type II secretion protein GspG gspG SWALL:Q8VRM7 (EMBL:AF426313) (151 aa) fasta scores: E(): 1, 28.7% id in 108 aa; type II secretion system protein 828809 2660230 BB0790 Bordetella bronchiseptica RB50 type II secretion system protein NP_887339.1 828015 R 257310 CDS NP_887340.1 33599780 2661867 complement(828844..829884) 1 NC_002927.3 Similar to Pseudomonas aeruginosa twitching mobility protein PilT or pa0395 SWALL:PILT_PSEAE (SWALL:P24559) (344 aa) fasta scores: E(): 1.1e-74, 66.37% id in 339 aa, and to Xanthomonas axonopodis twitching motility protein PilT or xac2924 or xcc2755 SWALL:AAM42027 (EMBL:AE011934) (345 aa) fasta scores: E(): 1.6e-83, 70.46% id in 342 aa; twitching mobility protein 829884 pilT 2661867 pilT Bordetella bronchiseptica RB50 twitching mobility protein NP_887340.1 828844 R 257310 CDS NP_887341.1 33599781 2662204 830131..830958 1 NC_002927.3 Similar to Burkholderia pseudomallei type 4 prepilin-like proteins leader peptide processing enzyme [includes: leader peptidase gspO SWALL:LEP4_BURPS (SWALL:Q9ZF70) (275 aa) fasta scores: E(): 5.3e-41, 51.35% id in 259 aa, and to Erwinia chrysanthemi type 4 prepilin-like proteins leader peptide processing enzyme outO SWALL:LEP4_ERWCH (SWALL:P31711) (283 aa) fasta scores: E(): 3.7e-37, 49.43% id in 267 aa; type 4 prepilin-like proteins leader peptide processing enzyme 830958 gspO 2662204 gspO Bordetella bronchiseptica RB50 type 4 prepilin-like proteins leader peptide processing enzyme NP_887341.1 830131 D 257310 CDS NP_887342.1 33599782 2659637 831107..833470 1 NC_002927.3 Similar to Salmonella enterica subsp. enterica serovar Typhimurium VrgS protein SWALL:Q93IR3 (EMBL:AJ320483) (729 aa) fasta scores: E(): 5.1e-85, 41.82% id in 593 aa, and to Escherichia coli VgrE protein SWALL:O52660 (EMBL:AF044499) (702 aa) fasta scores: E(): 4.4e-54, 29.18% id in 699 aa; hypothetical protein 833470 vrgS 2659637 vrgS Bordetella bronchiseptica RB50 hypothetical protein NP_887342.1 831107 D 257310 CDS NP_887343.1 33599783 2660256 833487..833900 1 NC_002927.3 hypothetical protein 833900 2660256 BB0794 Bordetella bronchiseptica RB50 hypothetical protein NP_887343.1 833487 D 257310 CDS NP_887344.1 33599784 2661800 833897..836521 1 NC_002927.3 hypothetical protein 836521 2661800 BB0795 Bordetella bronchiseptica RB50 hypothetical protein NP_887344.1 833897 D 257310 CDS NP_887345.1 33599785 2660166 836511..837572 1 NC_002927.3 hypothetical protein 837572 2660166 BB0796 Bordetella bronchiseptica RB50 hypothetical protein NP_887345.1 836511 D 257310 CDS NP_887346.1 33599786 2660201 837603..838511 1 NC_002927.3 hypothetical protein 838511 2660201 BB0797 Bordetella bronchiseptica RB50 hypothetical protein NP_887346.1 837603 D 257310 CDS NP_887347.1 33599787 2660159 838552..839112 1 NC_002927.3 hypothetical protein 839112 2660159 BB0798 Bordetella bronchiseptica RB50 hypothetical protein NP_887347.1 838552 D 257310 CDS NP_887348.1 33599788 2660227 839515..840564 1 NC_002927.3 hypothetical protein 840564 2660227 BB0799 Bordetella bronchiseptica RB50 hypothetical protein NP_887348.1 839515 D 257310 CDS NP_887349.1 33599789 2660272 840607..841170 1 NC_002927.3 hypothetical protein 841170 2660272 BB0800 Bordetella bronchiseptica RB50 hypothetical protein NP_887349.1 840607 D 257310 CDS NP_887350.1 33599790 2660252 841192..842694 1 NC_002927.3 hypothetical protein 842694 2660252 BB0801 Bordetella bronchiseptica RB50 hypothetical protein NP_887350.1 841192 D 257310 CDS NP_887351.1 33599791 2661666 842770..843237 1 NC_002927.3 hypothetical protein 843237 2661666 BB0802 Bordetella bronchiseptica RB50 hypothetical protein NP_887351.1 842770 D 257310 CDS NP_887352.1 33599792 2661632 843287..844096 1 NC_002927.3 hypothetical protein 844096 2661632 BB0803 Bordetella bronchiseptica RB50 hypothetical protein NP_887352.1 843287 D 257310 CDS NP_887353.1 33599793 2661689 844093..844611 1 NC_002927.3 hypothetical protein 844611 2661689 BB0804 Bordetella bronchiseptica RB50 hypothetical protein NP_887353.1 844093 D 257310 CDS NP_887354.1 33599794 2661675 844611..846524 1 NC_002927.3 hypothetical protein 846524 2661675 BB0805 Bordetella bronchiseptica RB50 hypothetical protein NP_887354.1 844611 D 257310 CDS NP_887355.1 33599795 2661784 846559..847218 1 NC_002927.3 hypothetical protein 847218 2661784 BB0806 Bordetella bronchiseptica RB50 hypothetical protein NP_887355.1 846559 D 257310 CDS NP_887356.1 33599796 2661708 847215..848309 1 NC_002927.3 hypothetical protein 848309 2661708 BB0807 Bordetella bronchiseptica RB50 hypothetical protein NP_887356.1 847215 D 257310 CDS NP_887357.1 33599797 2661639 848306..848839 1 NC_002927.3 hypothetical protein 848839 2661639 BB0808 Bordetella bronchiseptica RB50 hypothetical protein NP_887357.1 848306 D 257310 CDS NP_887358.1 33599798 2661799 848829..849206 1 NC_002927.3 hypothetical protein 849206 2661799 BB0809 Bordetella bronchiseptica RB50 hypothetical protein NP_887358.1 848829 D 257310 CDS NP_887359.1 33599799 2661638 849230..851839 1 NC_002927.3 ATPase 851839 2661638 BB0810 Bordetella bronchiseptica RB50 ATPase NP_887359.1 849230 D 257310 CDS NP_887360.1 33599800 2661882 complement(851938..852738) 1 NC_002927.3 hypothetical protein 852738 2661882 BB0811 Bordetella bronchiseptica RB50 hypothetical protein NP_887360.1 851938 R 257310 CDS NP_887361.1 33599801 2660068 complement(852766..853161) 1 NC_002927.3 lipoprotein 853161 2660068 BB0812 Bordetella bronchiseptica RB50 lipoprotein NP_887361.1 852766 R 257310 CDS NP_887362.1 33599802 2661923 853426..853968 1 NC_002927.3 lipoprotein 853968 2661923 BB0813 Bordetella bronchiseptica RB50 lipoprotein NP_887362.1 853426 D 257310 CDS NP_887363.1 33599803 2661892 854014..855348 1 NC_002927.3 hypothetical protein 855348 2661892 BB0814 Bordetella bronchiseptica RB50 hypothetical protein NP_887363.1 854014 D 257310 CDS NP_887364.1 33599804 2661907 855369..856649 1 NC_002927.3 hypothetical protein 856649 2661907 BB0815 Bordetella bronchiseptica RB50 hypothetical protein NP_887364.1 855369 D 257310 CDS NP_887365.1 33599805 2661919 856646..860251 1 NC_002927.3 hypothetical protein 860251 2661919 BB0816 Bordetella bronchiseptica RB50 hypothetical protein NP_887365.1 856646 D 257310 CDS NP_887366.1 33599806 2661896 860248..860982 1 NC_002927.3 hypothetical protein 860982 2661896 BB0817 Bordetella bronchiseptica RB50 hypothetical protein NP_887366.1 860248 D 257310 CDS NP_887367.1 33599807 2661911 861007..862185 1 NC_002927.3 hypothetical protein 862185 2661911 BB0818 Bordetella bronchiseptica RB50 hypothetical protein NP_887367.1 861007 D 257310 CDS NP_887368.1 33599808 2662253 862283..863449 1 NC_002927.3 calcium/proton antiporter 863449 2662253 BB0819 Bordetella bronchiseptica RB50 calcium/proton antiporter NP_887368.1 862283 D 257310 CDS NP_887369.1 33599809 2662258 863623..865035 1 NC_002927.3 lipoprotein 865035 2662258 BB0820 Bordetella bronchiseptica RB50 lipoprotein NP_887369.1 863623 D 257310 CDS NP_887370.1 33599810 2662263 complement(865043..868006) 1 NC_002927.3 autotransporter 868006 2662263 BB0821 Bordetella bronchiseptica RB50 autotransporter NP_887370.1 865043 R 257310 CDS NP_887371.1 33599811 2662285 868456..869934 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3092; phospholipase D 869934 2662285 BB0822 Bordetella bronchiseptica RB50 phospholipase D NP_887371.1 868456 D 257310 CDS NP_887372.1 33599812 2662299 complement(869941..871050) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3093; molybdenum transport ATP-binding protein 871050 modD 2662299 modD Bordetella bronchiseptica RB50 molybdenum transport ATP-binding protein NP_887372.1 869941 R 257310 CDS NP_887373.1 33599813 2662321 complement(871062..871742) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3094; molybdenum transport system permease 871742 modC 2662321 modC Bordetella bronchiseptica RB50 molybdenum transport system permease NP_887373.1 871062 R 257310 CDS NP_887374.1 33599814 2662340 complement(871764..872519) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3095; molybdate ABC transporter substrate-binding protein 872519 modB 2662340 modB Bordetella bronchiseptica RB50 molybdate ABC transporter substrate-binding protein NP_887374.1 871764 R 257310 CDS NP_887375.1 33599815 2662335 complement(872655..873539) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3096; hydrolase 873539 2662335 BB0826 Bordetella bronchiseptica RB50 hydrolase NP_887375.1 872655 R 257310 CDS NP_887376.1 33599816 2662350 873564..874208 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3097; hypothetical protein 874208 2662350 BB0827 Bordetella bronchiseptica RB50 hypothetical protein NP_887376.1 873564 D 257310 CDS NP_887377.1 33599817 2662347 complement(874310..874432) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3098; hypothetical protein 874432 2662347 BB0828 Bordetella bronchiseptica RB50 hypothetical protein NP_887377.1 874310 R 257310 CDS NP_887378.1 33599818 2662364 complement(874478..874777) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3099; hypothetical protein 874777 2662364 BB0829 Bordetella bronchiseptica RB50 hypothetical protein NP_887378.1 874478 R 257310 CDS NP_887379.1 33599819 2662369 complement(874929..875354) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3100; hypothetical protein 875354 2662369 BB0830 Bordetella bronchiseptica RB50 hypothetical protein NP_887379.1 874929 R 257310 CDS NP_887380.1 33599820 2662356 complement(875424..875777) 1 NC_002927.3 hypothetical protein 875777 2662356 BB0831 Bordetella bronchiseptica RB50 hypothetical protein NP_887380.1 875424 R 257310 CDS NP_887381.1 33599821 2662374 complement(875845..877944) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3101; TonB-dependent receptor 877944 2662374 BB0832 Bordetella bronchiseptica RB50 TonB-dependent receptor NP_887381.1 875845 R 257310 CDS NP_887382.1 33599822 2662393 complement(877941..878444) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3102; regulatory protein 878444 2662393 BB0833 Bordetella bronchiseptica RB50 regulatory protein NP_887382.1 877941 R 257310 CDS NP_887383.1 33599823 2662403 878523..879764 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0539; ornithine--oxo-acid transaminase 879764 rocD 2662403 rocD Bordetella bronchiseptica RB50 ornithine--oxo-acid transaminase NP_887383.1 878523 D 257310 CDS NP_887384.1 33599824 2662419 879761..880705 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0538; arginase 880705 2662419 BB0835 Bordetella bronchiseptica RB50 arginase NP_887384.1 879761 D 257310 CDS NP_887385.1 33599825 2662445 complement(880722..881531) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0176; two-component response regulator 881531 2662445 BB0836 Bordetella bronchiseptica RB50 two-component response regulator NP_887385.1 880722 R 257310 CDS NP_887386.1 33599826 2662458 881844..882371 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0177; lipoprotein 882371 2662458 BB0837 Bordetella bronchiseptica RB50 lipoprotein NP_887386.1 881844 D 257310 CDS NP_887387.1 33599827 2662473 882463..883278 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0178; lipoprotein 883278 2662473 BB0838 Bordetella bronchiseptica RB50 lipoprotein NP_887387.1 882463 D 257310 CDS NP_887388.1 33599828 2662487 883339..884073 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0179; rhodanese superfamily protein 884073 2662487 BB0839 Bordetella bronchiseptica RB50 rhodanese superfamily protein NP_887388.1 883339 D 257310 CDS NP_887389.1 33599829 2662481 complement(884111..886189) 1 NC_002927.3 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 886189 metG 2662481 metG Bordetella bronchiseptica RB50 methionyl-tRNA synthetase NP_887389.1 884111 R 257310 CDS NP_887390.1 33599830 2662507 complement(886439..886711) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0181; hypothetical protein 886711 2662507 BB0841 Bordetella bronchiseptica RB50 hypothetical protein NP_887390.1 886439 R 257310 CDS NP_887391.1 33599831 2662514 886810..887898 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0182; iron sulfur binding protein 887898 2662514 BB0842 Bordetella bronchiseptica RB50 iron sulfur binding protein NP_887391.1 886810 D 257310 CDS NP_887392.1 33599832 2662524 887902..889806 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0183; hypothetical protein 889806 2662524 BB0843 Bordetella bronchiseptica RB50 hypothetical protein NP_887392.1 887902 D 257310 CDS NP_887393.1 33599833 2662526 889803..893477 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0184; hypothetical protein 893477 2662526 BB0844 Bordetella bronchiseptica RB50 hypothetical protein NP_887393.1 889803 D 257310 CDS NP_887394.1 33599834 2662539 893538..894101 1 NC_002927.3 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase 894101 dcd 2662539 dcd Bordetella bronchiseptica RB50 deoxycytidine triphosphate deaminase NP_887394.1 893538 D 257310 CDS NP_887395.1 33599835 2662542 complement(894109..894531) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0186; hypothetical protein 894531 2662542 BB0846 Bordetella bronchiseptica RB50 hypothetical protein NP_887395.1 894109 R 257310 CDS NP_887396.1 33599836 2662564 complement(894559..894978) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0187; lyase 894978 2662564 BB0847 Bordetella bronchiseptica RB50 lyase NP_887396.1 894559 R 257310 CDS NP_887397.1 33599837 2662568 complement(895007..895525) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0188; acetyltransferase 895525 2662568 BB0848 Bordetella bronchiseptica RB50 acetyltransferase NP_887397.1 895007 R 257310 CDS NP_887398.1 33599838 2662574 895578..896075 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0189; hypothetical protein 896075 2662574 BB0849 Bordetella bronchiseptica RB50 hypothetical protein NP_887398.1 895578 D 257310 CDS NP_887399.1 33599839 2662585 896230..898500 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0190; Orn/Arg/Lys decarboxylase 898500 2662585 BB0850 Bordetella bronchiseptica RB50 Orn/Arg/Lys decarboxylase NP_887399.1 896230 D 257310 CDS NP_887400.1 33599840 2659126 898544..899776 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0191; hypothetical protein 899776 2659126 BB0851 Bordetella bronchiseptica RB50 hypothetical protein NP_887400.1 898544 D 257310 CDS NP_887401.1 33599841 2659228 899822..900514 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0193; superoxide dismutase 900514 sodA 2659228 sodA Bordetella bronchiseptica RB50 superoxide dismutase NP_887401.1 899822 D 257310 CDS NP_887402.1 33599842 2659709 900511..901404 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0194; metal transporter 901404 2659709 BB0853 Bordetella bronchiseptica RB50 metal transporter NP_887402.1 900511 D 257310 CDS NP_887403.1 33599843 2660134 901799..902899 1 NC_002927.3 catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T 902899 gcvT 2660134 gcvT Bordetella bronchiseptica RB50 glycine cleavage system aminomethyltransferase T NP_887403.1 901799 D 257310 CDS NP_887404.1 33599844 2661701 903044..903355 1 NC_002927.3 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H 903355 gcvH 2661701 gcvH Bordetella bronchiseptica RB50 glycine cleavage system protein H NP_887404.1 903044 D 257310 CDS NP_887405.1 33599845 2661761 903415..906279 1 NC_002927.3 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase 906279 gcvP 2661761 gcvP Bordetella bronchiseptica RB50 glycine dehydrogenase NP_887405.1 903415 D 257310 CDS NP_887406.1 33599846 2660222 complement(906634..907374) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0198; GntR family transcriptional regulator 907374 2660222 BB0857 Bordetella bronchiseptica RB50 GntR family transcriptional regulator NP_887406.1 906634 R 257310 CDS NP_887407.1 33599847 2660262 907444..908655 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0199; hypothetical protein 908655 2660262 BB0858 Bordetella bronchiseptica RB50 hypothetical protein NP_887407.1 907444 D 257310 CDS NP_887408.1 33599848 2661178 908684..909652 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0200; hypothetical protein 909652 2661178 BB0859 Bordetella bronchiseptica RB50 hypothetical protein NP_887408.1 908684 D 257310 CDS NP_887409.1 33599849 2659694 909649..910482 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0201; enoyl-CoA hydratase 910482 2659694 BB0860 Bordetella bronchiseptica RB50 enoyl-CoA hydratase NP_887409.1 909649 D 257310 CDS NP_887410.1 33599850 2661718 complement(910533..912557) 1 NC_002927.3 hypothetical protein 912557 2661718 BB0861 Bordetella bronchiseptica RB50 hypothetical protein NP_887410.1 910533 R 257310 CDS NP_887411.1 33599851 2661782 complement(912685..914133) 1 NC_002927.3 hypothetical protein 914133 2661782 BB0862 Bordetella bronchiseptica RB50 hypothetical protein NP_887411.1 912685 R 257310 CDS NP_887412.1 33599852 2660214 complement(914309..915784) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3163; hypothetical protein 915784 2660214 BB0863 Bordetella bronchiseptica RB50 hypothetical protein NP_887412.1 914309 R 257310 CDS NP_887413.1 33599853 2660247 complement(915828..917486) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3162; ABC transporter ATP-binding protein 917486 2660247 BB0864 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_887413.1 915828 R 257310 CDS NP_887414.1 33599854 2659270 complement(917490..918389) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3161; peptide ABC transporter permease 918389 2659270 BB0865 Bordetella bronchiseptica RB50 peptide ABC transporter permease NP_887414.1 917490 R 257310 CDS NP_887415.1 33599855 2660143 complement(918392..919333) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3160; ABC transporter permease 919333 2660143 BB0866 Bordetella bronchiseptica RB50 ABC transporter permease NP_887415.1 918392 R 257310 CDS NP_887416.1 33599856 2661744 complement(919379..920944) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3159; peptide ABC transporter substrate-binding protein 920944 2661744 BB0867 Bordetella bronchiseptica RB50 peptide ABC transporter substrate-binding protein NP_887416.1 919379 R 257310 CDS NP_887417.1 33599857 2660221 complement(921230..922723) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3158; methylmalonate-semialdehyde dehydrogenase 922723 mmsA 2660221 mmsA Bordetella bronchiseptica RB50 methylmalonate-semialdehyde dehydrogenase NP_887417.1 921230 R 257310 CDS NP_887418.1 33599858 2660200 complement(922755..924038) 1 NC_002927.3 catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate; beta alanine--pyruvate transaminase 924038 2660200 BB0869 Bordetella bronchiseptica RB50 beta alanine--pyruvate transaminase NP_887418.1 922755 R 257310 CDS NP_887419.1 33599859 2661652 924263..925720 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3156; GntR family transcriptional regulator 925720 2661652 BB0870 Bordetella bronchiseptica RB50 GntR family transcriptional regulator NP_887419.1 924263 D 257310 CDS NP_887420.1 33599860 2661736 complement(925684..926181) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3155; dihydrofolate reductase 926181 folA 2661736 folA Bordetella bronchiseptica RB50 dihydrofolate reductase NP_887420.1 925684 R 257310 CDS NP_887421.1 33599861 2660120 complement(926212..927183) 1 NC_002927.3 ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase 927183 thyA 2660120 thyA Bordetella bronchiseptica RB50 thymidylate synthase NP_887421.1 926212 R 257310 CDS NP_887422.1 33599862 2661891 complement(927236..927673) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3153; hypothetical protein 927673 2661891 BB0873 Bordetella bronchiseptica RB50 hypothetical protein NP_887422.1 927236 R 257310 CDS NP_887423.1 33599863 2661905 927797..928465 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3152; hypothetical protein 928465 2661905 BB0874 Bordetella bronchiseptica RB50 hypothetical protein NP_887423.1 927797 D 257310 CDS NP_887424.1 33599864 2661914 929193..930296 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3151; glycosyltransferase 930296 2661914 BB0875 Bordetella bronchiseptica RB50 glycosyltransferase NP_887424.1 929193 D 257310 CDS NP_887425.1 33599865 2662259 930303..931676 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3150; polysaccharide biosynthesis protein 931676 wbpO 2662259 wbpO Bordetella bronchiseptica RB50 polysaccharide biosynthesis protein NP_887425.1 930303 D 257310 CDS NP_887426.1 33599866 2662314 931688..932713 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3149; UDP-N-acetylglucosamine C4 epimerase 932713 2662314 BB0877 Bordetella bronchiseptica RB50 UDP-N-acetylglucosamine C4 epimerase NP_887426.1 931688 D 257310 CDS NP_887427.1 33599867 2662324 932715..934085 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3148; hypothetical protein 934085 2662324 BB0878 Bordetella bronchiseptica RB50 hypothetical protein NP_887427.1 932715 D 257310 CDS NP_887428.1 33599868 2662343 934086..935222 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3147; glycosyltransferase 935222 2662343 BB0879 Bordetella bronchiseptica RB50 glycosyltransferase NP_887428.1 934086 D 257310 CDS NP_887429.1 33599869 2662353 935269..937194 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3146; asparagine synthase 937194 2662353 BB0880 Bordetella bronchiseptica RB50 asparagine synthase NP_887429.1 935269 D 257310 CDS NP_887430.1 33599870 2662410 937191..938312 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3145; glycosyltransferase 938312 2662410 BB0881 Bordetella bronchiseptica RB50 glycosyltransferase NP_887430.1 937191 D 257310 CDS NP_887431.1 33599871 2662428 938309..939463 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3144; glycosyltransferase 939463 2662428 BB0882 Bordetella bronchiseptica RB50 glycosyltransferase NP_887431.1 938309 D 257310 CDS NP_887432.1 33599872 2662438 939460..940590 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3143; glycosyltransferase 940590 2662438 BB0883 Bordetella bronchiseptica RB50 glycosyltransferase NP_887432.1 939460 D 257310 CDS NP_887433.1 33599873 2662471 complement(940598..942163) 1 NC_002927.3 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 942163 pgi 2662471 pgi Bordetella bronchiseptica RB50 glucose-6-phosphate isomerase NP_887433.1 940598 R 257310 CDS NP_887434.1 33599874 2662525 complement(942170..943552) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3141; phosphoglucomutase 943552 pgm 2662525 pgm Bordetella bronchiseptica RB50 phosphoglucomutase NP_887434.1 942170 R 257310 CDS NP_887435.1 33599875 2662098 943831..944442 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3140; hypothetical protein 944442 2662098 BB0886 Bordetella bronchiseptica RB50 hypothetical protein NP_887435.1 943831 D 257310 CDS NP_887436.1 33599876 2659293 944534..945949 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3139; oxidoreductase 945949 2659293 BB0887 Bordetella bronchiseptica RB50 oxidoreductase NP_887436.1 944534 D 257310 CDS NP_887437.1 33599877 2663646 945964..946674 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3138; two-component system response regulator 946674 2663646 BB0888 Bordetella bronchiseptica RB50 two-component system response regulator NP_887437.1 945964 D 257310 CDS NP_887438.1 33599878 2663335 946671..947993 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3137; two-component system sensor protein 947993 2663335 BB0889 Bordetella bronchiseptica RB50 two-component system sensor protein NP_887438.1 946671 D 257310 CDS NP_887439.1 33599879 2663345 948073..950034 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3136; sulfatase 950034 2663345 BB0890 Bordetella bronchiseptica RB50 sulfatase NP_887439.1 948073 D 257310 CDS NP_887440.1 33599880 2663341 complement(950146..951459) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3135; fumarylacetoacetase 951459 fahA 2663341 fahA Bordetella bronchiseptica RB50 fumarylacetoacetase NP_887440.1 950146 R 257310 CDS NP_887441.1 33599881 2663339 complement(951568..952866) 1 NC_002927.3 An oxygenase that acts to open the ring of homogentisate formingmaleylacetoacetate as part of the catabolism of L-tyrosine and L-phenylalanine; homogentisate 1,2-dioxygenase 952866 hmgA 2663339 hmgA Bordetella bronchiseptica RB50 homogentisate 1,2-dioxygenase NP_887441.1 951568 R 257310 CDS NP_887442.1 33599882 2663328 953049..953957 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3133; LysR family transcriptional regulator 953957 2663328 BB0893 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_887442.1 953049 D 257310 CDS NP_887443.1 33599883 2663857 complement(953967..954176) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3132; hypothetical protein 954176 2663857 BB0894 Bordetella bronchiseptica RB50 hypothetical protein NP_887443.1 953967 R 257310 CDS NP_887444.1 33599884 2662775 complement(954188..955867) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3131; FAD-dependent oxidoreductase 955867 2662775 BB0895 Bordetella bronchiseptica RB50 FAD-dependent oxidoreductase NP_887444.1 954188 R 257310 CDS NP_887445.1 33599885 2662690 complement(955969..956988) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3130; cyclase 956988 2662690 BB0896 Bordetella bronchiseptica RB50 cyclase NP_887445.1 955969 R 257310 CDS NP_887446.2 161609281 2663664 complement(957012..957839) 1 NC_002927.3 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 957839 mutM 2663664 mutM Bordetella bronchiseptica RB50 formamidopyrimidine-DNA glycosylase NP_887446.2 957012 R 257310 CDS NP_887447.1 33599887 2663132 957838..959724 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3128; hypothetical protein 959724 2663132 BB0898 Bordetella bronchiseptica RB50 hypothetical protein NP_887447.1 957838 D 257310 CDS NP_887448.1 33599888 2663648 959721..960320 1 NC_002927.3 Incorporates lipoproteins in the outer membrane after they are released by the LolA protein; outer membrane lipoprotein LolB 960320 lolB 2663648 lolB Bordetella bronchiseptica RB50 outer membrane lipoprotein LolB NP_887448.1 959721 D 257310 CDS NP_887449.1 33599889 2663204 960369..961268 1 NC_002927.3 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 961268 ipk 2663204 ipk Bordetella bronchiseptica RB50 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase NP_887449.1 960369 D 257310 CDS NP_887450.1 33599890 2662705 961495..962427 1 NC_002927.3 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase 962427 prsA 2662705 prsA Bordetella bronchiseptica RB50 ribose-phosphate pyrophosphokinase NP_887450.1 961495 D 257310 CDS NP_887451.1 33599891 2663884 962550..963164 1 NC_002927.3 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25 963164 rplY 2663884 rplY Bordetella bronchiseptica RB50 50S ribosomal protein L25 NP_887451.1 962550 D 257310 CDS NP_887452.1 33599892 2662730 963242..963889 1 NC_002927.3 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 963889 pth 2662730 pth Bordetella bronchiseptica RB50 peptidyl-tRNA hydrolase NP_887452.1 963242 D 257310 CDS NP_887453.1 33599893 2662991 963886..964668 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3122; hypothetical protein 964668 2662991 BB0904 Bordetella bronchiseptica RB50 hypothetical protein NP_887453.1 963886 D 257310 CDS NP_887454.1 33599894 2663587 964741..965832 1 NC_002927.3 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 965832 2663587 BB0905 Bordetella bronchiseptica RB50 GTP-dependent nucleic acid-binding protein EngD NP_887454.1 964741 D 257310 CDS NP_887455.1 33599895 2663181 966029..967240 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3120; Similar to Escherichia coli integrase Int SWALL:Q93SE7 (EMBL:AJ278144) (394 aa) fasta scores: E(): 5.8e-38, 32.23% id in 394 aa, and to Shigella flexneri Int SWALL:Q9XCI7 (EMBL:AF141323) (394 aa) fasta scores: E(): 5e-38, 32.48% id in 394 aa; integrase 967240 2663181 BB0906 Bordetella bronchiseptica RB50 integrase NP_887455.1 966029 D 257310 CDS NP_887456.1 33599896 2663159 967588..968634 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3118; Similar to Methanosarcina mazei hypothetical protein Mm2606 SWALL:AAM32302 (EMBL:AE013505) (359 aa) fasta scores: E(): 6.3e-09, 22.75% id in 334 aa, and to Escherichia coli O157:H7 orf, hypothetical protein z5009 or ecs4465 SWALL:Q8XDJ0 (EMBL:AE005585) (431 aa) fasta scores: E(): 1.2e-08, 27.64% id in 322 aa; hypothetical protein 968634 2663159 BB0907 Bordetella bronchiseptica RB50 hypothetical protein NP_887456.1 967588 D 257310 CDS NP_887457.1 33599897 2663694 968645..971932 1 NC_002927.3 Similar to Pasteurella multocida hypothetical protein Pm0696 SWALL:Q9CMV8 (EMBL:AE006106) (1089 aa) fasta scores: E(): 0, 61.3% id in 1101 aa, and to Listeria innocua hypothetical protein Pli0027 pli0027 SWALL:Q926M9 (EMBL:AL592102) (1001 aa) fasta scores: E(): 4.1e-113, 50.14% id in 1031 aa; helicase 971932 2663694 BB0908 Bordetella bronchiseptica RB50 helicase NP_887457.1 968645 D 257310 CDS NP_887458.1 33599898 2663297 971929..972588 1 NC_002927.3 Similar to Pasteurella multocida hypothetical protein Pm0697 SWALL:Q9CMV7 (EMBL:AE006106) (220 aa) fasta scores: E(): 2.7e-27, 38.63% id in 220 aa, and to Chlorobium tepidum TLS hypothetical protein ct0907 SWALL:AAM72142 (EMBL:AE012856) (252 aa) fasta scores: E(): 0.00094, 29.48% id in 234 aa; hypothetical protein 972588 2663297 BB0909 Bordetella bronchiseptica RB50 hypothetical protein NP_887458.1 971929 D 257310 CDS NP_887459.1 33599899 2663795 972650..973645 1 NC_002927.3 Similar to Rhizobium sp. hypothetical 37.6 kDa aaa-family ATPase Y4kL y4kL SWALL:Y4KL_RHISN (SWALL:P55530) (330 aa) fasta scores: E(): 1.8e-38, 41.41% id in 326 aa, and to Salmonella enterica subsp. enterica serovar Typhimurium ATPase s026 SWALL:Q9ADT7 (EMBL:AF261825) (329 aa) fasta scores: E(): 2.2e-28, 34.46% id in 325 aa; ATPase 973645 2663795 BB0910 Bordetella bronchiseptica RB50 ATPase NP_887459.1 972650 D 257310 CDS NP_887460.1 33599900 2663118 973652..976006 1 NC_002927.3 Similar to Rhizobium etli hypothetical protein yp094 SWALL:AAM55046 (EMBL:U80928) (823 aa) fasta scores: E(): 1.7e-08, 24.12% id in 858 aa, and to Agrobacterium tumefaciens hypothetical protein atu6083 atu6083 or agr_pti_160 SWALL:Q8U652 (EMBL:AE009427) (836 aa) fasta scores: E(): 3e-08, 25.19% id in 647 aa; serine protease 976006 2663118 BB0911 Bordetella bronchiseptica RB50 serine protease NP_887460.1 973652 D 257310 CDS NP_887461.1 33599901 2662919 976070..977911 1 NC_002927.3 Similar to Moraxella catarrhalis type III restriction-modification system methyltransferase Mod SWALL:Q93LB8 (EMBL:AY049056) (636 aa) fasta scores: E(): 2e-74, 37.9% id in 612 aa, and to Pasteurella multocida hypothetical protein Pm0698 pm0698 SWALL:Q9CMV6 (EMBL:AE006106) (636 aa) fasta scores: E(): 9.5e-69, 50.31% id in 644 aa; type III restriction-modification system methyltransferase 977911 2662919 BB0912 Bordetella bronchiseptica RB50 type III restriction-modification system methyltransferase NP_887461.1 976070 D 257310 CDS NP_887462.1 33599902 2663666 977922..981008 1 NC_002927.3 Similar to Salmonella typhimurium type III restriction-modification system stylti enzyme res res or stm0358 SWALL:T3RE_SALTY (SWALL:P40815) (990 aa) fasta scores: E(): 1.2e-21, 26.35% id in 1017 aa, and to Pasteurella multocida hypothetical protein Pm0699 pm0699 SWALL:Q9CMV5 (EMBL:AE006106) (1043 aa) fasta scores: E(): 2.4e-134, 52.32% id in 1055 aa; type III restriction enzyme 981008 2663666 BB0913 Bordetella bronchiseptica RB50 type III restriction enzyme NP_887462.1 977922 D 257310 CDS NP_887463.1 33599903 2662952 complement(981172..981885) 1 NC_002927.3 Similar to Salmonella enterica subsp. enterica serovar Typhimurium integrase s020 SWALL:Q9ADU1 (EMBL:AF261825) (321 aa) fasta scores: E(): 1.4e-05, 29.43% id in 214 aa, and to Francisella novicida hypothetical 33.7 kDa protein SWALL:Q9Z5W6 (EMBL:AF121418) (292 aa) fasta scores: E(): 1.2e-31, 41.94% id in 236 aa; integrase 981885 2662952 BB0914 Bordetella bronchiseptica RB50 integrase NP_887463.1 981172 R 257310 CDS NP_887464.1 33599904 2663284 complement(982505..983689) 1 NC_002927.3 Similar to Xanthomonas axonopodis hypothetical protein Xac2208 xac2208 SWALL:AAM37061 (EMBL:AE011858) (407 aa) fasta scores: E(): 8.9e-15, 33.06% id in 366 aa, and to Xylella fastidiosa hypothetical protein Xf1781 xf1781 SWALL:Q9PCJ8 (EMBL:AE004000) (418 aa) fasta scores: E(): 5.3e-14, 32.59% id in 359 aa; hypothetical protein 983689 2663284 BB0915 Bordetella bronchiseptica RB50 hypothetical protein NP_887464.1 982505 R 257310 CDS NP_887465.1 33599905 2663105 complement(984031..988248) 1 NC_002927.3 autotransporter 988248 2663105 BB0916 Bordetella bronchiseptica RB50 autotransporter NP_887465.1 984031 R 257310 CDS NP_887466.1 33599906 2663108 988824..990395 1 NC_002927.3 regulatory protein 990395 2663108 BB0917 Bordetella bronchiseptica RB50 regulatory protein NP_887466.1 988824 D 257310 CDS NP_887467.1 33599907 2663470 complement(990446..991450) 1 NC_002927.3 hypothetical protein 991450 2663470 BB0918 Bordetella bronchiseptica RB50 hypothetical protein NP_887467.1 990446 R 257310 CDS NP_887468.1 33599908 2663071 complement(991824..992564) 1 NC_002927.3 TetR family transcriptional regulator 992564 2663071 BB0919 Bordetella bronchiseptica RB50 TetR family transcriptional regulator NP_887468.1 991824 R 257310 CDS NP_887469.1 33599909 2663300 complement(992791..993738) 1 NC_002927.3 hypothetical protein 993738 2663300 BB0920 Bordetella bronchiseptica RB50 hypothetical protein NP_887469.1 992791 R 257310 CDS NP_887470.1 33599910 2663317 993954..995129 1 NC_002927.3 hypothetical protein 995129 2663317 BB0921 Bordetella bronchiseptica RB50 hypothetical protein NP_887470.1 993954 D 257310 CDS NP_887471.1 33599911 2662936 complement(995176..995961) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3452; GntR family transcriptional regulator 995961 2662936 BB0922 Bordetella bronchiseptica RB50 GntR family transcriptional regulator NP_887471.1 995176 R 257310 CDS NP_887472.1 33599912 2662824 complement(995958..997619) 1 NC_002927.3 catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; also known as acetolactate synthase large subunit; thiamine pyrophosphate protein 997619 2662824 BB0923 Bordetella bronchiseptica RB50 thiamine pyrophosphate protein NP_887472.1 995958 R 257310 CDS NP_887473.1 33599913 2663622 complement(997694..998659) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3454; lipoprotein 998659 2663622 BB0924 Bordetella bronchiseptica RB50 lipoprotein NP_887473.1 997694 R 257310 CDS NP_887474.1 33599914 2663233 complement(998714..999622) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3455; taurine dioxygenase 999622 2663233 BB0925 Bordetella bronchiseptica RB50 taurine dioxygenase NP_887474.1 998714 R 257310 CDS NP_887475.1 33599915 2663218 complement(999929..1002217) 1 NC_002927.3 catalyzes the oxidative decarboxylation of malate to form pyruvate; malic enzyme 1002217 maeB 2663218 maeB Bordetella bronchiseptica RB50 malic enzyme NP_887475.1 999929 R 257310 CDS NP_887476.1 33599916 2662819 1002335..1003330 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3457; LysR family transcriptional regulator 1003330 2662819 BB0927 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_887476.1 1002335 D 257310 CDS NP_887477.1 33599917 2662686 1003582..1004523 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3458; peptide ABC transporter permease 1004523 2662686 BB0928 Bordetella bronchiseptica RB50 peptide ABC transporter permease NP_887477.1 1003582 D 257310 CDS NP_887478.1 33599918 2662803 1004523..1005356 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3459; peptide ABC transporter permease 1005356 2662803 BB0929 Bordetella bronchiseptica RB50 peptide ABC transporter permease NP_887478.1 1004523 D 257310 CDS NP_887479.1 33599919 2662826 1005360..1007210 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3460; ABC transporter ATP-binding protein 1007210 2662826 BB0930 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_887479.1 1005360 D 257310 CDS NP_887480.1 33599920 2662740 1007279..1008871 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3461; peptide ABC transporter substrate-binding protein 1008871 2662740 BB0931 Bordetella bronchiseptica RB50 peptide ABC transporter substrate-binding protein NP_887480.1 1007279 D 257310 CDS NP_887481.1 33599921 2663688 1008890..1010428 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3462; hypothetical protein 1010428 2663688 BB0932 Bordetella bronchiseptica RB50 hypothetical protein NP_887481.1 1008890 D 257310 CDS NP_887482.1 33599922 2663391 complement(1010522..1011463) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3463; LysR family transcriptional regulator 1011463 2663391 BB0933 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_887482.1 1010522 R 257310 CDS NP_887483.1 33599923 2663420 1011533..1012372 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3464; hypothetical protein 1012372 2663420 BB0934 Bordetella bronchiseptica RB50 hypothetical protein NP_887483.1 1011533 D 257310 CDS NP_887484.1 33599924 2663230 complement(1012434..1012940) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3465; hypothetical protein 1012940 2663230 BB0935 Bordetella bronchiseptica RB50 hypothetical protein NP_887484.1 1012434 R 257310 CDS NP_887485.1 33599925 2662885 complement(1012937..1013275) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3466; ArsR family transcriptional regulator 1013275 2662885 BB0936 Bordetella bronchiseptica RB50 ArsR family transcriptional regulator NP_887485.1 1012937 R 257310 CDS NP_887486.1 33599926 2662643 1013713..1016232 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3467; hypothetical protein 1016232 2662643 BB0937 Bordetella bronchiseptica RB50 hypothetical protein NP_887486.1 1013713 D 257310 CDS NP_887487.1 33599927 2663636 1016229..1016615 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3468; hypothetical protein 1016615 2663636 BB0938 Bordetella bronchiseptica RB50 hypothetical protein NP_887487.1 1016229 D 257310 CDS NP_887488.1 33599928 2663637 complement(1016623..1017840) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3469; transport protein 1017840 2663637 BB0939 Bordetella bronchiseptica RB50 transport protein NP_887488.1 1016623 R 257310 CDS NP_887489.1 33599929 2663400 complement(1017837..1018088) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3470; ferredoxin 1018088 fdx 2663400 fdx Bordetella bronchiseptica RB50 ferredoxin NP_887489.1 1017837 R 257310 CDS NP_887490.1 33599930 2663139 complement(1018143..1018652) 1 NC_002927.3 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 1018652 coaD 2663139 coaD Bordetella bronchiseptica RB50 phosphopantetheine adenylyltransferase NP_887490.1 1018143 R 257310 CDS NP_887491.1 33599931 2662808 complement(1018673..1019293) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3472; hypothetical protein 1019293 2662808 BB0942 Bordetella bronchiseptica RB50 hypothetical protein NP_887491.1 1018673 R 257310 CDS NP_887492.1 33599932 2662713 1019501..1020568 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3473; cell division protein 1020568 ftsY 2662713 ftsY Bordetella bronchiseptica RB50 cell division protein NP_887492.1 1019501 D 257310 CDS NP_887493.1 33599933 2663313 complement(1020615..1022213) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3474; hypothetical protein 1022213 2663313 BB0944 Bordetella bronchiseptica RB50 hypothetical protein NP_887493.1 1020615 R 257310 CDS NP_887494.1 33599934 2663189 complement(1022454..1023275) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3476; binding-protein-dependent transport system permease 1023275 2663189 BB0945 Bordetella bronchiseptica RB50 binding-protein-dependent transport system permease NP_887494.1 1022454 R 257310 CDS NP_887495.1 33599935 2663475 complement(1023272..1024162) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3477; phosphate/phosphonate ABC transporter permease 1024162 2663475 BB0946 Bordetella bronchiseptica RB50 phosphate/phosphonate ABC transporter permease NP_887495.1 1023272 R 257310 CDS NP_887496.1 33599936 2662886 complement(1024159..1024929) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3479; transport system ATP-binding protein 1024929 2662886 BB0947 Bordetella bronchiseptica RB50 transport system ATP-binding protein NP_887496.1 1024159 R 257310 CDS NP_887497.1 33599937 2662784 complement(1024932..1025939) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3481; hypothetical protein 1025939 2662784 BB0948 Bordetella bronchiseptica RB50 hypothetical protein NP_887497.1 1024932 R 257310 CDS NP_887498.1 33599938 2662693 complement(1026088..1026915) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3482; transcriptional regulator 1026915 2662693 BB0949 Bordetella bronchiseptica RB50 transcriptional regulator NP_887498.1 1026088 R 257310 CDS NP_887499.1 33599939 2663406 complement(1026921..1027700) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3483; haloacid dehalogenase-like hydrolase 1027700 2663406 BB0950 Bordetella bronchiseptica RB50 haloacid dehalogenase-like hydrolase NP_887499.1 1026921 R 257310 CDS NP_887500.1 33599940 2663236 1027864..1029039 1 NC_002927.3 bifunctional enzyme DHBP synthase/GTP cyclohydrolase II-like protein; functions in riboflavin synthesis; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein 1029039 ribB 2663236 ribB Bordetella bronchiseptica RB50 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein NP_887500.1 1027864 D 257310 CDS NP_887501.1 33599941 2662692 1029053..1029580 1 NC_002927.3 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 1029580 ribH 2662692 ribH Bordetella bronchiseptica RB50 6,7-dimethyl-8-ribityllumazine synthase NP_887501.1 1029053 D 257310 CDS NP_887502.1 33599942 2662948 1029588..1030052 1 NC_002927.3 Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 1030052 nusB 2662948 nusB Bordetella bronchiseptica RB50 transcription antitermination protein NusB NP_887502.1 1029588 D 257310 CDS NP_887503.1 33599943 2663251 1030092..1031108 1 NC_002927.3 catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP; thiamine monophosphate kinase 1031108 thiL 2663251 thiL Bordetella bronchiseptica RB50 thiamine monophosphate kinase NP_887503.1 1030092 D 257310 CDS NP_887504.1 33599944 2663242 1031105..1031647 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3488; phosphatidylglycerophosphatase 1031647 2663242 BB0955 Bordetella bronchiseptica RB50 phosphatidylglycerophosphatase NP_887504.1 1031105 D 257310 CDS NP_887505.1 33599945 2663215 1031644..1032210 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3489; hypothetical protein 1032210 2663215 BB0956 Bordetella bronchiseptica RB50 hypothetical protein NP_887505.1 1031644 D 257310 CDS NP_887506.1 33599946 2663472 complement(1032377..1033198) 1 NC_002927.3 OMP decarboxylase; OMPDCase; OMPdecase; type 2 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase 1033198 pyrF 2663472 pyrF Bordetella bronchiseptica RB50 orotidine 5'-phosphate decarboxylase NP_887506.1 1032377 R 257310 CDS NP_887507.1 33599947 2663303 complement(1033206..1034525) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3491; NADH dehydrogenase 1034525 ndh 2663303 ndh Bordetella bronchiseptica RB50 NADH dehydrogenase NP_887507.1 1033206 R 257310 CDS NP_887508.1 33599948 2662990 complement(1034576..1034974) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3492; diacylglycerol kinase 1034974 dgkA 2662990 dgkA Bordetella bronchiseptica RB50 diacylglycerol kinase NP_887508.1 1034576 R 257310 CDS NP_887509.1 33599949 2663244 complement(1035063..1035953) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3493; serum resistance protein 1035953 brkB 2663244 brkB Bordetella bronchiseptica RB50 serum resistance protein NP_887509.1 1035063 R 257310 CDS NP_887510.1 33599950 2662796 complement(1039390..1041033) 1 NC_002927.3 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL 1041033 groEL 2662796 groEL Bordetella bronchiseptica RB50 chaperonin GroEL NP_887510.1 1039390 R 257310 CDS NP_887511.1 33599951 2662742 complement(1041066..1041353) 1 NC_002927.3 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 1041353 groES 2662742 groES Bordetella bronchiseptica RB50 co-chaperonin GroES NP_887511.1 1041066 R 257310 CDS NP_887512.1 33599952 2662749 complement(1041745..1042374) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3497; hypothetical protein 1042374 2662749 BB0964 Bordetella bronchiseptica RB50 hypothetical protein NP_887512.1 1041745 R 257310 CDS NP_887513.1 33599953 2662724 complement(1042371..1043072) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3498; hypothetical protein 1043072 2662724 BB0965 Bordetella bronchiseptica RB50 hypothetical protein NP_887513.1 1042371 R 257310 CDS NP_887514.1 33599954 2663200 complement(1043121..1043756) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3499; hypothetical protein 1043756 2663200 BB0966 Bordetella bronchiseptica RB50 hypothetical protein NP_887514.1 1043121 R 257310 CDS NP_887515.1 33599955 2663302 complement(1043800..1045509) 1 NC_002927.3 proposed role in polysaccahride synthesis; FAD-binding dehydrogenase 1045509 2663302 BB0967 Bordetella bronchiseptica RB50 FAD-binding dehydrogenase NP_887515.1 1043800 R 257310 CDS NP_887516.1 33599956 2663407 complement(1045571..1046521) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3501; hypothetical protein 1046521 2663407 BB0968 Bordetella bronchiseptica RB50 hypothetical protein NP_887516.1 1045571 R 257310 CDS NP_887517.1 33599957 2662743 complement(1047127..1048140) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3503; LysR family transcriptional regulator 1048140 2662743 BB0969 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_887517.1 1047127 R 257310 CDS NP_887518.1 33599958 2663164 1048188..1049933 1 NC_002927.3 proposed role in polysaccahride synthesis; FAD-binding dehydrogenase 1049933 2663164 BB0970 Bordetella bronchiseptica RB50 FAD-binding dehydrogenase NP_887518.1 1048188 D 257310 CDS NP_887519.1 33599959 2663306 1050044..1051009 1 NC_002927.3 hypothetical protein 1051009 2663306 BB0971 Bordetella bronchiseptica RB50 hypothetical protein NP_887519.1 1050044 D 257310 CDS NP_887520.1 33599960 2663644 complement(1051046..1051798) 1 NC_002927.3 transcriptional regulator 1051798 2663644 BB0972 Bordetella bronchiseptica RB50 transcriptional regulator NP_887520.1 1051046 R 257310 CDS NP_887521.1 33599961 2662878 complement(1051913..1052296) 1 NC_002927.3 carboxymuconolactone decarboxylase 1052296 2662878 BB0973 Bordetella bronchiseptica RB50 carboxymuconolactone decarboxylase NP_887521.1 1051913 R 257310 CDS NP_887522.1 33599962 2663176 complement(1052312..1053301) 1 NC_002927.3 6-phosphogluconate dehydrogenase 1053301 2663176 BB0974 Bordetella bronchiseptica RB50 6-phosphogluconate dehydrogenase NP_887522.1 1052312 R 257310 CDS NP_887523.1 33599963 2662933 complement(1053474..1054160) 1 NC_002927.3 hydrolase 1054160 2662933 BB0975 Bordetella bronchiseptica RB50 hydrolase NP_887523.1 1053474 R 257310 CDS NP_887524.1 33599964 2662926 1054705..1056336 1 NC_002927.3 lactate permease family protein 1056336 2662926 BB0976 Bordetella bronchiseptica RB50 lactate permease family protein NP_887524.1 1054705 D 257310 CDS NP_887525.1 33599965 2663453 1056333..1056545 1 NC_002927.3 hypothetical protein 1056545 2663453 BB0977 Bordetella bronchiseptica RB50 hypothetical protein NP_887525.1 1056333 D 257310 CDS NP_887526.1 33599966 2663616 1056589..1058250 1 NC_002927.3 gamma-glutamyltranspeptidase 1058250 ggt 2663616 ggt Bordetella bronchiseptica RB50 gamma-glutamyltranspeptidase NP_887526.1 1056589 D 257310 CDS NP_887527.1 33599967 2662710 1058269..1058730 1 NC_002927.3 universal stress protein 1058730 2662710 BB0979 Bordetella bronchiseptica RB50 universal stress protein NP_887527.1 1058269 D 257310 CDS NP_887528.1 33599968 2663225 complement(1058748..1059221) 1 NC_002927.3 GNAT family acetyltransferase 1059221 2663225 BB0980 Bordetella bronchiseptica RB50 GNAT family acetyltransferase NP_887528.1 1058748 R 257310 CDS NP_887529.1 33599969 2663449 complement(1059332..1061179) 1 NC_002927.3 acyl-CoA dehydrogenase 1061179 2663449 BB0981 Bordetella bronchiseptica RB50 acyl-CoA dehydrogenase NP_887529.1 1059332 R 257310 CDS NP_887530.1 33599970 2662944 complement(1061213..1062439) 1 NC_002927.3 hypothetical protein 1062439 2662944 BB0982 Bordetella bronchiseptica RB50 hypothetical protein NP_887530.1 1061213 R 257310 CDS NP_887531.1 33599971 2662838 complement(1062488..1063477) 1 NC_002927.3 hypothetical protein 1063477 2662838 BB0983 Bordetella bronchiseptica RB50 hypothetical protein NP_887531.1 1062488 R 257310 CDS NP_887532.1 33599972 2662685 1063618..1064511 1 NC_002927.3 LysR family transcriptional regulator 1064511 2662685 BB0984 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_887532.1 1063618 D 257310 CDS NP_887533.1 33599973 2662812 1064650..1065339 1 NC_002927.3 hypothetical protein 1065339 2662812 BB0985 Bordetella bronchiseptica RB50 hypothetical protein NP_887533.1 1064650 D 257310 CDS NP_887534.1 33599974 2662949 complement(1065323..1066306) 1 NC_002927.3 hypothetical protein 1066306 2662949 BB0986 Bordetella bronchiseptica RB50 hypothetical protein NP_887534.1 1065323 R 257310 CDS NP_887535.1 33599975 2662918 complement(1066387..1067127) 1 NC_002927.3 hypothetical protein 1067127 2662918 BB0987 Bordetella bronchiseptica RB50 hypothetical protein NP_887535.1 1066387 R 257310 CDS NP_887536.1 33599976 2662773 complement(1067143..1068672) 1 NC_002927.3 hypothetical protein 1068672 2662773 BB0988 Bordetella bronchiseptica RB50 hypothetical protein NP_887536.1 1067143 R 257310 CDS NP_887537.1 33599977 2662776 complement(1068685..1069683) 1 NC_002927.3 hypothetical protein 1069683 2662776 BB0989 Bordetella bronchiseptica RB50 hypothetical protein NP_887537.1 1068685 R 257310 CDS NP_887538.1 33599978 2663842 1069793..1070710 1 NC_002927.3 LysR family transcriptional regulator 1070710 2663842 BB0990 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_887538.1 1069793 D 257310 CDS NP_887539.1 33599979 2663682 complement(1070707..1071870) 1 NC_002927.3 hypothetical protein 1071870 2663682 BB0991 Bordetella bronchiseptica RB50 hypothetical protein NP_887539.1 1070707 R 257310 CDS NP_887540.1 33599980 2663458 complement(1072011..1073453) 1 NC_002927.3 pyridine nucleotide-disulfide oxidoreductase 1073453 2663458 BB0992 Bordetella bronchiseptica RB50 pyridine nucleotide-disulfide oxidoreductase NP_887540.1 1072011 R 257310 CDS NP_887541.1 33599981 2663264 complement(1073450..1073758) 1 NC_002927.3 hypothetical protein 1073758 2663264 BB0993 Bordetella bronchiseptica RB50 hypothetical protein NP_887541.1 1073450 R 257310 CDS NP_887542.1 33599982 2662725 complement(1073742..1074896) 1 NC_002927.3 FAD dependent oxidoreductase 1074896 2662725 BB0994 Bordetella bronchiseptica RB50 FAD dependent oxidoreductase NP_887542.1 1073742 R 257310 CDS NP_887543.1 33599983 2662947 complement(1074924..1075973) 1 NC_002927.3 dipeptidase 1075973 2662947 BB0995 Bordetella bronchiseptica RB50 dipeptidase NP_887543.1 1074924 R 257310 CDS NP_887544.1 33599984 2662706 complement(1076032..1077150) 1 NC_002927.3 ABC transporter ATP-binding protein 1077150 2662706 BB0996 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_887544.1 1076032 R 257310 CDS NP_887545.1 33599985 2663685 complement(1077147..1077920) 1 NC_002927.3 spermidine/putrescine ABC transporter permease 1077920 2663685 BB0997 Bordetella bronchiseptica RB50 spermidine/putrescine ABC transporter permease NP_887545.1 1077147 R 257310 CDS NP_887546.1 33599986 2662854 complement(1077917..1078783) 1 NC_002927.3 spermidine/putrescine ABC transporter substrate-binding protein 1078783 2662854 BB0998 Bordetella bronchiseptica RB50 spermidine/putrescine ABC transporter substrate-binding protein NP_887546.1 1077917 R 257310 CDS NP_887547.1 33599987 2662927 complement(1078878..1079939) 1 NC_002927.3 spermidine/putrescine ABC transporter substrate-binding protein 1079939 2662927 BB0999 Bordetella bronchiseptica RB50 spermidine/putrescine ABC transporter substrate-binding protein NP_887547.1 1078878 R 257310 CDS NP_887548.1 33599988 2662902 complement(1080178..1081098) 1 NC_002927.3 LysR family transcriptional regulator 1081098 2662902 BB1000 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_887548.1 1080178 R 257310 CDS NP_887549.1 33599989 2662704 complement(1081317..1082090) 1 NC_002927.3 enoyl-CoA hydratase 1082090 2662704 BB1001 Bordetella bronchiseptica RB50 enoyl-CoA hydratase NP_887549.1 1081317 R 257310 CDS NP_887550.1 33599990 2662659 complement(1082135..1083754) 1 NC_002927.3 long-chain-fatty-acid-CoA ligase 1083754 2662659 BB1002 Bordetella bronchiseptica RB50 long-chain-fatty-acid-CoA ligase NP_887550.1 1082135 R 257310 CDS NP_887551.1 33599991 2663162 complement(1083756..1084724) 1 NC_002927.3 Similar to Comamonas testosteroni OrfJ protein SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 4.3e-30, 36.72% id in 324 aa, and to Rhizobium meliloti hypothetical protein ra1058 ra1058 or sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 7.4e-30, 34.4% id in 311 aa; hypothetical protein 1084724 2663162 BB1003 Bordetella bronchiseptica RB50 hypothetical protein NP_887551.1 1083756 R 257310 CDS NP_887552.1 33599992 2662924 1084893..1085804 1 NC_002927.3 Similar to Salmonella typhimurium OsmT protein SWALL:Q93IN5 (EMBL:AJ313506) (308 aa) fasta scores: E(): 1.1e-19, 29.86% id in 298 aa, and to Salmonella typhi LysR-family transcriptioanl regulator sty3944 SWALL:Q8Z2N3 (EMBL:AL627280) (302 aa) fasta scores: E(): 4e-20, 28.96% id in 290 aa; LysR family transcriptional regulator 1085804 2662924 BB1004 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_887552.1 1084893 D 257310 CDS NP_887553.1 33599993 2662703 complement(1085821..1087470) 1 NC_002927.3 Similar to Pseudomonas aeruginosa probable ATP-binding protein of ABC transporter pa2061 SWALL:Q9I254 (EMBL:AE004632) (536 aa) fasta scores: E(): 4.5e-71, 46.08% id in 523 aa, and to Agrobacterium tumefaciens ABC transporter nucleotide binding/ATPase atu5068 or agr_pat_93 SWALL:Q8UKN2 (EMBL:AE008931) (539 aa) fasta scores: E(): 9.8e-69, 41.87% id in 554 aa; ABC transporter ATP-binding protein 1087470 2662703 BB1005 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_887553.1 1085821 R 257310 CDS NP_887554.1 33599994 2663229 complement(1087479..1088399) 1 NC_002927.3 Similar to Bacillus halodurans oligopeptide ABC transporter AppB or bh0348 SWALL:Q9KFX2 (EMBL:AP001508) (305 aa) fasta scores: E(): 3.6e-28, 32.51% id in 286 aa, and to Ralstonia solanacearum probable transmembrane ABC transporter protein rsc1381 or rs04750 SWALL:Q8XZL4 (EMBL:AL646064) (307 aa) fasta scores: E(): 1.4e-26, 34.69% id in 294 aa; peptide ABC transporter permease 1088399 2663229 BB1006 Bordetella bronchiseptica RB50 peptide ABC transporter permease NP_887554.1 1087479 R 257310 CDS NP_887555.1 33599995 2663377 complement(1088396..1089229) 1 NC_002927.3 Similar to Agrobacterium tumefaciens AgaC SWALL:O50261 (EMBL:AF242881) (275 aa) fasta scores: E(): 7.8e-30, 38.49% id in 265 aa, and to Bacillus halodurans oligopeptide ABC transporter bh0030 SWALL:Q9KGM8 (EMBL:AP001507) (301 aa) fasta scores: E(): 2.7e-30, 35.15% id in 256 aa; peptide ABC transporter permease 1089229 2663377 BB1007 Bordetella bronchiseptica RB50 peptide ABC transporter permease NP_887555.1 1088396 R 257310 CDS NP_887556.1 33599996 2663125 complement(1089229..1090779) 1 NC_002927.3 Similar to Agrobacterium tumefaciens ABC transporter substrate-binding protein atu5343 or agr_pat_490 SWALL:Q8UJY1 (EMBL:AE008956) (517 aa) fasta scores: E(): 1.9e-22, 31.03% id in 406 aa, and to Rhizobium loti dipeptide-binding protein of ABC transporter mlr1186 SWALL:Q98L42 (EMBL:AP002996) (497 aa) fasta scores: E(): 1.8e-21, 28.38% id in 465 aa; peptide ABC transporter substrate-binding protein 1090779 2663125 BB1008 Bordetella bronchiseptica RB50 peptide ABC transporter substrate-binding protein NP_887556.1 1089229 R 257310 CDS NP_887557.1 33599997 2663145 complement(1090776..1092083) 1 NC_002927.3 Weakly similar to Clostridium acetobutylicum ap superfamily cac0477 SWALL:Q97LS7 (EMBL:AE007562) (434 aa) fasta scores: E(): 0.00024, 20.63% id in 441 aa, and to Clostridium perfringens hypothetical protein Cpe1375 cpe1375 SWALL:Q8XKL9 (EMBL:AP003190) (431 aa) fasta scores: E(): 0.13, 20.5% id in 434 aa; hypothetical protein 1092083 2663145 BB1009 Bordetella bronchiseptica RB50 hypothetical protein NP_887557.1 1090776 R 257310 CDS NP_887558.1 33599998 2662717 complement(1092236..1093495) 1 NC_002927.3 Similar to Pseudomonas fluorescens phosphonoacetate hydrolase PhnA SWALL:Q51782 (EMBL:L49465) (407 aa) fasta scores: E(): 1.7e-79, 52.06% id in 411 aa, and to Rhizobium meliloti phosphonoacetate hydrolase PhnA or rb0978 or smb21538 SWALL:Q92UV8 (EMBL:AL603645) (424 aa) fasta scores: E(): 1.7e-70, 46.42% id in 420 aa; phosphonoacetate hydrolase 1093495 phnA 2662717 phnA Bordetella bronchiseptica RB50 phosphonoacetate hydrolase NP_887558.1 1092236 R 257310 CDS NP_887559.1 33599999 2663384 1093635..1094528 1 NC_002927.3 Similar to Pseudomonas fluorescens positive transcriptional regulator PhnR SWALL:O69758 (EMBL:L49465) (299 aa) fasta scores: E(): 1.3e-57, 53.33% id in 285 aa, and to Agrobacterium tumefaciens transcriptional regulator, LysR-family atu4419 or agr_l_895 SWALL:Q8U7N0 (EMBL:AE009370) (306 aa) fasta scores: E(): 4.4e-28, 32.87% id in 292 aa; LysR family transcriptional regulator 1094528 phnR 2663384 phnR Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_887559.1 1093635 D 257310 CDS NP_887560.1 33600000 2663695 complement(1094548..1095480) 1 NC_002927.3 catalyzes the formation of L-proline from L-ornithine; ornithine cyclodeaminase 1095480 2663695 BB1012 Bordetella bronchiseptica RB50 ornithine cyclodeaminase NP_887560.1 1094548 R 257310 CDS NP_887561.1 33600001 2662683 complement(1095517..1096563) 1 NC_002927.3 Similar to Mycoplana ramosa acetylpolyamine aminohydrolase apha or apH SWALL:APHA_MYCRA (SWALL:Q48935) (341 aa) fasta scores: E(): 3.4e-49, 42.64% id in 340 aa, and to Rhizobium loti acetylpolyamine aminohydrolase mll0103 SWALL:Q98NK3 (EMBL:AP002994) (342 aa) fasta scores: E(): 7.8e-74, 54.3% id in 337 aa; acetylpolyamine aminohydrolase 1096563 aphA 2662683 aphA Bordetella bronchiseptica RB50 acetylpolyamine aminohydrolase NP_887561.1 1095517 R 257310 CDS NP_887562.1 33600002 2663175 complement(1096604..1097716) 1 NC_002927.3 Similar to Pseudomonas aeruginosa 3-isopropylmalate dehydrogenase LeuB or pa3118 SWALL:LEU3_PSEAE (SWALL:Q51375) (360 aa) fasta scores: E(): 5.9e-61, 48.09% id in 368 aa, and to Agrobacterium tumefaciens 3-isopropylmalate dehydrogenase LeuB or atu2791 or agr_c_5067 SWALL:LEU3_AGRT5 (SWALL:P24404) (370 aa) fasta scores: E(): 6e-62, 46.72% id in 366 aa; 3-isopropylmalate dehydrogenase 1097716 leuB 2663175 leuB Bordetella bronchiseptica RB50 3-isopropylmalate dehydrogenase NP_887562.1 1096604 R 257310 CDS NP_887563.1 33600003 2662750 complement(1097720..1098349) 1 NC_002927.3 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit 1098349 leuD 2662750 leuD Bordetella bronchiseptica RB50 isopropylmalate isomerase small subunit NP_887563.1 1097720 R 257310 CDS NP_887564.1 33600004 2662989 complement(1098390..1099784) 1 NC_002927.3 dehydratase, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 1099784 leuC 2662989 leuC Bordetella bronchiseptica RB50 isopropylmalate isomerase large subunit NP_887564.1 1098390 R 257310 CDS NP_887565.1 33600005 2663423 complement(1099789..1100853) 1 NC_002927.3 Similar to Ralstonia solanacearum probable signal peptide protein rsc1198 or rs05730 SWALL:Q8Y046 (EMBL:AL646063) (349 aa) fasta scores: E(): 3.9e-52, 48.67% id in 339 aa, and to Brucella melitensis taurine-binding periplasmic protein precursor bmeii0963 SWALL:Q8YBD7 (EMBL:AE009729) (320 aa) fasta scores: E(): 6.3e-45, 42.35% id in 314 aa; taurine ABC transporter substrate-binding protein 1100853 2663423 BB1017 Bordetella bronchiseptica RB50 taurine ABC transporter substrate-binding protein NP_887565.1 1099789 R 257310 CDS NP_887566.1 33600006 2663457 complement(1100946..1101698) 1 NC_002927.3 Similar to Ralstonia solanacearum probable transmembrane permease ABC transporter protein rsc1200 or rs02669 SWALL:Q8Y044 (EMBL:AL646063) (263 aa) fasta scores: E(): 1.1e-60, 68.18% id in 242 aa, and to Brucella melitensis taurine transport permease tauc bmeii0962 SWALL:Q8YBD8 (EMBL:AE009729) (263 aa) fasta scores: E(): 4.1e-53, 57.76% id in 251 aa; transmembrane permease ABC transporter protein 1101698 2663457 BB1018 Bordetella bronchiseptica RB50 transmembrane permease ABC transporter protein NP_887566.1 1100946 R 257310 CDS NP_887567.1 33600007 2662695 complement(1101745..1102578) 1 NC_002927.3 Similar to Ralstonia solanacearum probable ATP-binding ABC transporter protein rsc1199 or rs02665 SWALL:Q8Y045 (EMBL:AL646063) (270 aa) fasta scores: E(): 1.7e-59, 67.17% id in 262 aa, and to Brucella melitensis taurine transport ATP-binding protein TauB bmeii0961 SWALL:Q8YBD9 (EMBL:AE009729) (281 aa) fasta scores: E(): 1.9e-46, 53.48% id in 258 aa; ATP-binding ABC transporter protein 1102578 2662695 BB1019 Bordetella bronchiseptica RB50 ATP-binding ABC transporter protein NP_887567.1 1101745 R 257310 CDS NP_887568.1 33600008 2663385 complement(1102731..1103642) 1 NC_002927.3 Similar to Pseudomonas aeruginosa probable transcriptional regulator pa0877 SWALL:Q9I568 (EMBL:AE004522) (298 aa) fasta scores: E(): 2e-34, 34.01% id in 294 aa, and to Brucella melitensis transcriptional regulatory protein, LysR-family bmeii1077 SWALL:Q8YB24 (EMBL:AE009740) (294 aa) fasta scores: E(): 5.6e-34, 34.12% id in 296 aa; LysR family transcriptional regulator 1103642 2663385 BB1020 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_887568.1 1102731 R 257310 CDS NP_887569.1 33600009 2663450 1103786..1104172 1 NC_002927.3 Similar to Pseudomonas putida hypothetical 15.9 kDa protein SWALL:Q8VMK3 (EMBL:AJ344068) (138 aa) fasta scores: E(): 1.2e-23, 50.42% id in 117 aa, and to Rhizobium meliloti hypothetical protein rb0250 rb0250 or smb20260 SWALL:Q92WS9 (EMBL:AL603642) (130 aa) fasta scores: E(): 4.5e-18, 48.43% id in 128 aa; hypothetical protein 1104172 2663450 BB1021 Bordetella bronchiseptica RB50 hypothetical protein NP_887569.1 1103786 D 257310 CDS NP_887570.1 33600010 2663329 complement(1104180..1104710) 1 NC_002927.3 Similar to Bacillus subtilis probable acetyltransferase YdaF SWALL:P96579 (EMBL:AB001488) (183 aa) fasta scores: E(): 4e-08, 27.84% id in 176 aa, and to Staphylococcus aureus Mw0318 protein SWALL:BAB94183 (EMBL:AP004823) (181 aa) fasta scores: E(): 1.6e-12, 27.48% id in 171 aa; acetyltransferase 1104710 2663329 BB1022 Bordetella bronchiseptica RB50 acetyltransferase NP_887570.1 1104180 R 257310 CDS NP_887571.1 33600011 2663397 complement(1104758..1104895) 1 NC_002927.3 no significant database matches; hypothetical protein 1104895 2663397 BB1023 Bordetella bronchiseptica RB50 hypothetical protein NP_887571.1 1104758 R 257310 CDS NP_887572.1 33600012 2663396 complement(1104915..1105838) 1 NC_002927.3 Similar to Escherichia coli cyn operon transcriptional activator CynR or b0338 SWALL:CYNR_ECOLI (SWALL:P27111) (311 aa) fasta scores: E(): 7.6e-17, 30.16% id in 305 aa, and to Xylella fastidiosa oxidative stress transcriptional regulator xf1532 SWALL:Q9PD47 (EMBL:AE003983) (325 aa) fasta scores: E(): 3.9e-17, 29.54% id in 308 aa; LysR family transcriptional regulator 1105838 2663396 BB1024 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_887572.1 1104915 R 257310 CDS NP_887573.1 33600013 2663603 1105937..1107268 1 NC_002927.3 Similar to Homo sapiens arylsulfatase a precursor ArsA SWALL:ARSA_HUMAN (SWALL:P15289) (507 aa) fasta scores: E(): 1.9e-42, 35.63% id in 449 aa, and to Rhizobium meliloti arylsulfatase AslA1 or rb1214 or smb20915 SWALL:Q92UC0 (EMBL:AL603646) (537 aa) fasta scores: E(): 3.8e-36, 33.1% id in 438 aa; sulfatase 1107268 2663603 BB1025 Bordetella bronchiseptica RB50 sulfatase NP_887573.1 1105937 D 257310 CDS NP_887574.1 33600014 2662696 1107309..1108271 1 NC_002927.3 Similar to Rhizobium meliloti hypothetical protein Ra1058 or sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 2e-28, 33.12% id in 323 aa, and to Pseudomonas putida, and Pseudomonas sp. hypothetical 34.5 kDa protein in clcb-clcd intergenic region precursor SWALL:YCLC_PSEPU (SWALL:Q47100) (329 aa) fasta scores: E(): 5.1e-28, 35.39% id in 308 aa; hypothetical protein 1108271 2662696 BB1026 Bordetella bronchiseptica RB50 hypothetical protein NP_887574.1 1107309 D 257310 CDS NP_887575.1 33600015 2663667 complement(1108387..1109343) 1 NC_002927.3 Similar to Azorhizobium caulinodans Nac protein SWALL:O66393 (EMBL:AJ006238) (311 aa) fasta scores: E(): 3.3e-27, 33.97% id in 312 aa, and to Agrobacterium tumefaciens transcriptional regulator, LysR family Nac or atu4279 or agr_l_1169 SWALL:Q8U820 (EMBL:AE009356) (301 aa) fasta scores: E(): 1.7e-19, 27.74% id in 310 aa; LysR family transcriptional regulator 1109343 2663667 BB1027 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_887575.1 1108387 R 257310 CDS NP_887576.1 33600016 2663602 1109472..1110446 1 NC_002927.3 Similar to Rhizobium meliloti hypothetical protein Ra1058 or sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 3.4e-43, 40.86% id in 323 aa, and to Comamonas testosteroni OrfJ protein SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 9.9e-38, 37.8% id in 328 aa; hypothetical protein 1110446 2663602 BB1028 Bordetella bronchiseptica RB50 hypothetical protein NP_887576.1 1109472 D 257310 CDS NP_887577.1 33600017 2662694 1110443..1111219 1 NC_002927.3 Similar to Clostridium thermosaccharolyticum crotonase crT SWALL:P97087 (EMBL:Z92974) (259 aa) fasta scores: E(): 4.8e-22, 31.87% id in 251 aa, and to Thermoanaerobacter tengcongensis enoyl-coa hydratase/carnithine racemase caid or tte0544 SWALL:Q8RC92 (EMBL:AE013024) (260 aa) fasta scores: E(): 1.5e-21, 31.87% id in 251 aa; enoyl-CoA hydratase 1111219 2662694 BB1029 Bordetella bronchiseptica RB50 enoyl-CoA hydratase NP_887577.1 1110443 D 257310 CDS NP_887578.1 33600018 2663153 complement(1111258..1112229) 1 NC_002927.3 Similar to Rhizobium meliloti hypothetical protein ra1058 or sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 9.8e-48, 45.06% id in 324 aa, and to Comamonas testosteroni OrfJ protein SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 1.3e-40, 40.74% id in 324 aa; hypothetical protein 1112229 2663153 BB1030 Bordetella bronchiseptica RB50 hypothetical protein NP_887578.1 1111258 R 257310 CDS NP_887579.1 33600019 2662938 1112547..1113467 1 NC_002927.3 Similar to Pseudomonas aeruginosa 3-hydroxyisobutyrate dehydrogenase MmsB or pa3569 SWALL:MMSB_PSEAE (SWALL:P28811) (298 aa) fasta scores: E(): 6.2e-21, 35.5% id in 276 aa, and to Rhizobium meliloti hypothetical protein rb1375 rb1375 or smb20668 SWALL:Q92TW9 (EMBL:AL603646) (301 aa) fasta scores: E(): 1.9e-34, 44.48% id in 290 aa; 3-hydroxyisobutyrate dehydrogenase 1113467 2662938 BB1031 Bordetella bronchiseptica RB50 3-hydroxyisobutyrate dehydrogenase NP_887579.1 1112547 D 257310 CDS NP_887580.1 33600020 2663609 1113464..1114324 1 NC_002927.3 Similar to the N-terminal region of Rhodobacter sphaeroides molybdenum cofactor biosynthesis protein a moeA SWALL:Q9ZFA5 (EMBL:AF108766) (394 aa) fasta scores: E(): 0.47, 26.59% id in 282 aa; hypothetical protein 1114324 2663609 BB1032 Bordetella bronchiseptica RB50 hypothetical protein NP_887580.1 1113464 D 257310 CDS NP_887581.1 33600021 2661840 1114349..1115044 1 NC_002927.3 Similar to Escherichia coli 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase HpcH or HpaI SWALL:HPAI_ECOLI (SWALL:Q47098) (262 aa) fasta scores: E(): 8.6e-07, 26.93% id in 245 aa, and to Yersinia pestis 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase HpaI or ypo1767 SWALL:Q8ZFE7 (EMBL:AJ414150) (268 aa) fasta scores: E(): 3.7e-08, 28.76% id in 219 aa; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 1115044 2661840 BB1033 Bordetella bronchiseptica RB50 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase NP_887581.1 1114349 D 257310 CDS NP_887582.1 33600022 2662754 1115041..1116402 1 NC_002927.3 Similar to Rhizobium meliloti hypothetical protein rb0380 or smb20394 SWALL:Q92WF9 (EMBL:AL603643) (442 aa) fasta scores: E(): 1e-47, 41.13% id in 440 aa, and to Rhizobium loti hypothetical protein Mll7005 SWALL:Q987L2 (EMBL:AP003010) (438 aa) fasta scores: E(): 2.1e-44, 39.41% id in 444 aa; hypothetical protein 1116402 2662754 BB1034 Bordetella bronchiseptica RB50 hypothetical protein NP_887582.1 1115041 D 257310 CDS NP_887583.1 33600023 2663854 complement(1116443..1117714) 1 NC_002927.3 Similar to Chlorobium limicola f.sp. thiosulfatophilum rubisco-like protein RbcL SWALL:Q9AMC5 (EMBL:AF326322) (434 aa) fasta scores: E(): 4.1e-40, 33.33% id in 408 aa, and to Rhizobium meliloti ribulose bisphosphate carboxylaseoxygenase, large subunit protein rbcl or rb0379 or smb20393 SWALL:Q92WG0 (EMBL:AL603643) (418 aa) fasta scores: E(): 1.7e-61, 45.52% id in 413 aa; ribulose bisphosphate carboxylaseoxygenase,large subunit 1117714 2663854 BB1035 Bordetella bronchiseptica RB50 ribulose bisphosphate carboxylaseoxygenase,large subunit NP_887583.1 1116443 R 257310 CDS NP_887584.1 33600024 2663389 1117890..1118771 1 NC_002927.3 Similar to Pseudomonas syringae trpba operon transcriptional activator TrpI SWALL:TRPI_PSESY (SWALL:P34818) (298 aa) fasta scores: E(): 3.3e-37, 43.52% id in 301 aa, and to Pseudomonas aeruginosa trpba operon transcriptional activator TrpI or pa0037 SWALL:TRPI_PSEAE (SWALL:P11720) (295 aa) fasta scores: E(): 3.8e-37, 42.28% id in 298 aa; LysR family transcriptional regulator 1118771 2663389 BB1036 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_887584.1 1117890 D 257310 CDS NP_887585.1 33600025 2663482 complement(1118782..1119681) 1 NC_002927.3 Similar to Pseudomonas aeruginosa probable transcriptional regulator pa3594 SWALL:Q9HY32 (EMBL:AE004780) (295 aa) fasta scores: E(): 2.4e-41, 44.56% id in 285 aa, and to Deinococcus radiodurans transcriptional regulator, LysR family dr0615 SWALL:Q9RWQ1 (EMBL:AE001919) (317 aa) fasta scores: E(): 2.2e-32, 38.48% id in 304 aa; LysR family transcriptional regulator 1119681 2663482 BB1037 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_887585.1 1118782 R 257310 CDS NP_887586.1 33600026 2663452 1119810..1120586 1 NC_002927.3 Similar to Escherichia coli probable enoyl-CoA hydratase PaaF or b1393 SWALL:PAAF_ECOLI (SWALL:P76082) (255 aa) fasta scores: E(): 5e-20, 33.06% id in 245 aa, and to Bacillus halodurans enoyl CoA hydratase YngF or PhaA or bh0201 SWALL:Q9Z9V2 (EMBL:AB011837) (257 aa) fasta scores: E(): 4e-23, 31.78% id in 258 aa; enoyl-CoA hydratase 1120586 2663452 BB1038 Bordetella bronchiseptica RB50 enoyl-CoA hydratase NP_887586.1 1119810 D 257310 CDS NP_887587.1 33600027 2662748 1120632..1121597 1 NC_002927.3 Similar to Rhizobium meliloti hypothetical protein Ra1058 or Sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 1e-36, 39.29% id in 313 aa, and to Comamonas testosteroni OrfJ protein OrfJ SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 1.1e-31, 36.76% id in 321 aa; hypothetical protein 1121597 2662748 BB1039 Bordetella bronchiseptica RB50 hypothetical protein NP_887587.1 1120632 D 257310 CDS NP_887588.1 33600028 2663070 1121629..1122837 1 NC_002927.3 Similar to Acinetobacter sp. NCIMB9871 L-carnitine dehydrogenase Orf17 SWALL:Q93RL7 (EMBL:AB026669) (405 aa) fasta scores: E(): 2.9e-82, 53.13% id in 399 aa, and to Ralstonia solanacearum transmembrane protein rsc0796 or rs05041 SWALL:Q8Y194 (EMBL:AL646061) (420 aa) fasta scores: E(): 2.2e-84, 55.77% id in 398 aa; hypothetical protein 1122837 2663070 BB1040 Bordetella bronchiseptica RB50 hypothetical protein NP_887588.1 1121629 D 257310 CDS NP_887589.1 33600029 2663487 complement(1122842..1123732) 1 NC_002927.3 Similar to Rhizobium meliloti LysR type regulator ra0164 or sma0303 SWALL:Q930N1 (EMBL:AE007210) (292 aa) fasta scores: E(): 3.4e-18, 31.35% id in 287 aa, and to Xanthomonas campestris transcriptional regulator TrpI or xcc2544 SWALL:AAM41816 (EMBL:AE012366) (298 aa) fasta scores: E(): 5e-17, 32% id in 300 aa; LysR family transcriptional regulator 1123732 2663487 BB1041 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_887589.1 1122842 R 257310 CDS NP_887590.1 33600030 2663073 1123857..1124840 1 NC_002927.3 Similar to Treponema hyodysenteriae periplasmic-iron-binding protein BitC SWALL:O54369 (EMBL:U75349) (339 aa) fasta scores: E(): 7.1e-28, 30.48% id in 328 aa, and to Agrobacterium tumefaciens ABC transporter substrate-binding protein atu4577 or agr_l_591 SWALL:Q8U777 (EMBL:AE009386) (387 aa) fasta scores: E(): 2.4e-26, 32.45% id in 302 aa; iron ABC transporter substrate-binding protein 1124840 2663073 BB1042 Bordetella bronchiseptica RB50 iron ABC transporter substrate-binding protein NP_887590.1 1123857 D 257310 CDS NP_887591.1 33600031 2663580 1124868..1125932 1 NC_002927.3 Similar to Agrobacterium tumefaciens ABC transporter nucleotide binding/ATPase AfuC or atu4786 or agr_l_193 SWALL:Q8U6M1 (EMBL:AE009407) (353 aa) fasta scores: E(): 1.6e-45, 50.92% id in 324 aa, and to Rhizobium meliloti iron ABC transporter ATP-binding protein rb0349 or smb20363 SWALL:Q92WJ0 (EMBL:AL603643) (353 aa) fasta scores: E(): 2.9e-43, 49.68% id in 322 aa; iron ABC transporter ATP-binding protein 1125932 2663580 BB1043 Bordetella bronchiseptica RB50 iron ABC transporter ATP-binding protein NP_887591.1 1124868 D 257310 CDS NP_887592.1 33600032 2663741 1125929..1127587 1 NC_002927.3 Similar to Agrobacterium tumefaciens ABC transporter membrane spanning protein atu4579 or agr_l_586 SWALL:Q8U775 (EMBL:AE009386) (561 aa) fasta scores: E(): 3.9e-57, 32.1% id in 542 aa, and to Fusobacterium nucleatum iron fn0377 SWALL:Q8RGC7 (EMBL:AE010549) (550 aa) fasta scores: E(): 1.3e-49, 27.58% id in 551 aa; iron ABC transporter permease 1127587 2663741 BB1044 Bordetella bronchiseptica RB50 iron ABC transporter permease NP_887592.1 1125929 D 257310 CDS NP_887593.1 33600033 2663785 1127584..1128810 1 NC_002927.3 Similar to Rhizobium meliloti aspartate aminotransferase b AatB SWALL:AAB2_RHIME (SWALL:Q06191) (410 aa) fasta scores: E(): 5.4e-83, 54.14% id in 410 aa, and to Agrobacterium tumefaciens aspartate aminotransferase a AatA or atu2196 or agr_c_3991 SWALL:Q8UDD1 (EMBL:AE009170) (400 aa) fasta scores: E(): 1.2e-82, 55.44% id in 395 aa; aspartate aminotransferase 1128810 aatB 2663785 aatB Bordetella bronchiseptica RB50 aspartate aminotransferase NP_887593.1 1127584 D 257310 CDS NP_887594.1 33600034 2663653 1128853..1129725 1 NC_002927.3 Similar to Tetrahymena pyriformis phosphoenolpyruvate phosphomutase precursor PepM SWALL:PEPM_TETPY (SWALL:P33182) (300 aa) fasta scores: E(): 3e-38, 41.81% id in 287 aa, and to Mytilus edulis phosphoenolpyruvate phosphomutase SWALL:PEPM_MYTED (SWALL:P56839) (295 aa) fasta scores: E(): 4.8e-37, 42.7% id in 288 aa; phosphoenolpyruvate phosphomutase 1129725 pepM 2663653 pepM Bordetella bronchiseptica RB50 phosphoenolpyruvate phosphomutase NP_887594.1 1128853 D 257310 CDS NP_887595.1 33600035 2663041 complement(1129741..1130712) 1 NC_002927.3 Similar to Rhizobium meliloti hypothetical protein ra1058 or sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 4.8e-38, 39.29% id in 313 aa, and to Comamonas testosteroni OrfJ protein SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 4e-30, 32.4% id in 324 aa; hypothetical protein 1130712 2663041 BB1047 Bordetella bronchiseptica RB50 hypothetical protein NP_887595.1 1129741 R 257310 CDS NP_887596.1 33600036 2662770 complement(1130759..1131679) 1 NC_002927.3 Similar to Zymomonas mobilis gluconolactonase precursor Gnl SWALL:GNL_ZYMMO (SWALL:Q01578) (320 aa) fasta scores: E(): 0.0024, 29.85% id in 211 aa, and to Caulobacter crescentus gluconolactonase, cc2128 SWALL:Q9A6G6 (EMBL:AE005885) (303 aa) fasta scores: E(): 2.4e-47, 47.36% id in 304 aa; gluconolactonase 1131679 2662770 BB1048 Bordetella bronchiseptica RB50 gluconolactonase NP_887596.1 1130759 R 257310 CDS NP_887597.1 33600037 2662774 complement(1131720..1132565) 1 NC_002927.3 Similar to Erwinia chrysanthemi AcsB SWALL:Q93AU1 (EMBL:AF416739) (258 aa) fasta scores: E(): 5.5e-19, 37.26% id in 212 aa, and to Ralstonia solanacearum probable aldolase rsp0423 or rs00880 SWALL:Q8XSP4 (EMBL:AL646078) (267 aa) fasta scores: E(): 2.8e-19, 39.13% id in 207 aa; aldolase 1132565 2662774 BB1049 Bordetella bronchiseptica RB50 aldolase NP_887597.1 1131720 R 257310 CDS NP_887598.1 33600038 2662778 complement(1132562..1133563) 1 NC_002927.3 Similar to Agrobacterium tumefaciens phosphoglycerate dehydrogenase SerA or atu5399 or agr_pat_578 SWALL:Q8UJS6 (EMBL:AE008961) (317 aa) fasta scores: E(): 2.2e-32, 41.33% id in 254 aa, and to Aeropyrum pernix 326aa long hypothetical formate dehydrogenase ape2507 SWALL:Q9Y8X7 (EMBL:AP000064) (326 aa) fasta scores: E(): 8e-30, 35.62% id in 320 aa; dehydrogenase 1133563 2662778 BB1050 Bordetella bronchiseptica RB50 dehydrogenase NP_887598.1 1132562 R 257310 CDS NP_887599.1 33600039 2662842 complement(1135229..1136098) 1 NC_002927.3 Similar to Escherichia coli alpha-ketoglutarate-dependent taurine dioxygenase TauD or SsiD or b0368 SWALL:TAUD_ECOLI (SWALL:P37610) (282 aa) fasta scores: E(): 5.9e-21, 32.5% id in 283 aa, and to Pseudomonas aeruginosa hypothetical protein Pa2310 pa2310 SWALL:Q9I1G5 (EMBL:AE004657) (295 aa) fasta scores: E(): 3.5e-30, 38.72% id in 297 aa; dioxygenase 1136098 2662842 BB1053 Bordetella bronchiseptica RB50 dioxygenase NP_887599.1 1135229 R 257310 CDS NP_887600.1 33600040 2662804 1136220..1137188 1 NC_002927.3 Similar to Escherichia coli transcriptional activator protein LysR or b2839 SWALL:LYSR_ECOLI (SWALL:P03030) (311 aa) fasta scores: E(): 2.3e-21, 33.21% id in 289 aa, and to Rhizobium loti transcriptional regulator mlr7023 SWALL:Q987J8 (EMBL:AP003010) (301 aa) fasta scores: E(): 4.8e-22, 32.74% id in 281 aa; LysR family transcriptional regulator 1137188 2662804 BB1054 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_887600.1 1136220 D 257310 CDS NP_887601.1 33600041 2663604 1137334..1138629 1 NC_002927.3 Similar to Leptospira meyeri O-acetylhomoserine sulfhydrylase MetY SWALL:P94890 (EMBL:Y10744) (442 aa) fasta scores: E(): 4.1e-86, 55.58% id in 439 aa, and to Xanthomonas campestris homocysteine synthase pa5025 MetB or xcc3068 SWALL:AAM42339 (EMBL:AE012421) (428 aa) fasta scores: E(): 7.5e-129, 80.33% id in 422 aa; O-acetylhomoserine sulfhydrylase 1138629 metY 2663604 metY Bordetella bronchiseptica RB50 O-acetylhomoserine sulfhydrylase NP_887601.1 1137334 D 257310 CDS NP_887602.1 33600042 2663678 complement(1138677..1139201) 1 NC_002927.3 Similar to Legionella pneumophila Mip SWALL:Q53427 (EMBL:S71704) (184 aa) fasta scores: E(): 2.6e-06, 30.33% id in 178 aa, and to Pseudomonas aeruginosa hypothetical protein Pa0269 SWALL:Q9I6M1 (EMBL:AE004465) (145 aa) fasta scores: E(): 1.8e-07, 33.82% id in 136 aa; hypothetical protein 1139201 2663678 BB1056 Bordetella bronchiseptica RB50 hypothetical protein NP_887602.1 1138677 R 257310 CDS NP_887603.1 33600043 2663610 complement(1139302..1140096) 1 NC_002927.3 Similar to Rhizobium meliloti hypothetical protein rb1005 or smb21565 SWALL:Q92UT2 (EMBL:AL603645) (248 aa) fasta scores: E(): 2.5e-83, 80.32% id in 244 aa, and to Rhizobium loti hypothetical protein Mlr1911 SWALL:Q98JJ9 (EMBL:AP002998) (249 aa) fasta scores: E(): 3.1e-78, 74.69% id in 245 aa; hypothetical protein 1140096 2663610 BB1057 Bordetella bronchiseptica RB50 hypothetical protein NP_887603.1 1139302 R 257310 CDS NP_887604.1 33600044 2663314 complement(1140221..1140880) 1 NC_002927.3 Similar to Rhizobium loti transcriptional regulator mll7060 SWALL:Q987G6 (EMBL:AP003010) (230 aa) fasta scores: E(): 1.7e-20, 37.11% id in 194 aa, and to Acinetobacter calcoaceticus transcriptional repressor MdcY SWALL:Q9F0Q8 (EMBL:AF209728) (224 aa) fasta scores: E(): 7.2e-18, 32.82% id in 195 aa; GntR family transcriptional regulator 1140880 2663314 BB1058 Bordetella bronchiseptica RB50 GntR family transcriptional regulator NP_887604.1 1140221 R 257310 CDS NP_887605.1 33600045 2663471 1141076..1142263 1 NC_002927.3 Similar to Agrobacterium tumefaciens L-carnitine dehydratase CaiB or atu2127 or agr_c_3858 SWALL:Q8UDJ8 (EMBL:AE009163) (419 aa) fasta scores: E(): 1.3e-50, 40.31% id in 382 aa, and to Thermoplasma volcanium L-carnitine dehydratase tv1186 or tvg1215416 SWALL:Q979H5 (EMBL:AP000995) (399 aa) fasta scores: E(): 4.5e-48, 34.27% id in 388 aa; hypothetical protein 1142263 2663471 BB1059 Bordetella bronchiseptica RB50 hypothetical protein NP_887605.1 1141076 D 257310 CDS NP_887606.1 33600046 2662827 1142343..1143347 1 NC_002927.3 Similar to Pseudomonas stutzeri probable c4 dicarboxylate binding protein DctP SWALL:Q93JT7 (EMBL:AJ313422) (331 aa) fasta scores: E(): 3.9e-26, 32.68% id in 309 aa, and to Rhodobacter capsulatus c4-dicarboxylate-binding periplasmic protein precursor DctP SWALL:DCTP_RHOCA (SWALL:P37735) (333 aa) fasta scores: E(): 6.8e-26, 31.83% id in 333 aa; C4-dicarboxylate ABC transporter substrate-binding protein 1143347 2662827 BB1060 Bordetella bronchiseptica RB50 C4-dicarboxylate ABC transporter substrate-binding protein NP_887606.1 1142343 D 257310 CDS NP_887607.1 33600047 2663886 1143370..1143897 1 NC_002927.3 Similar to Wolinella succinogenes small integral C4-dicarboxylate membrane transport protein, dctQ SWALL:Q9ZEJ3 (EMBL:AJ132740) (170 aa) fasta scores: E(): 7.2e-09, 27.27% id in 165 aa, and to Bacillus halodurans C4-dicarboxylate transport system bh2672 SWALL:Q9K9H5 (EMBL:AP001516) (183 aa) fasta scores: E(): 2.2e-08, 29.57% id in 142 aa; integral membrane transport protein 1143897 2663886 BB1061 Bordetella bronchiseptica RB50 integral membrane transport protein NP_887607.1 1143370 D 257310 CDS NP_887608.1 33600048 2663368 1143919..1145175 1 NC_002927.3 Similar to Pasteurella multocida hypothetical protein Pm0273 SWALL:Q9CNZ7 (EMBL:AE006062) (427 aa) fasta scores: E(): 2.8e-54, 40.09% id in 414 aa, and to Pseudomonas stutzeri probable c4-dicarboxylate transporter DctM SWALL:Q93JT5 (EMBL:AJ313422) (426 aa) fasta scores: E(): 2.1e-51, 40.53% id in 412 aa; C4-dicarboxylate ABC transporter permease 1145175 2663368 BB1062 Bordetella bronchiseptica RB50 C4-dicarboxylate ABC transporter permease NP_887608.1 1143919 D 257310 CDS NP_887609.1 33600049 2663369 1145178..1145978 1 NC_002927.3 Similar to Streptomyces coelicolor hypothetical protein sco2750 or scc57a.21C SWALL:Q9RDH7 (EMBL:AL136519) (287 aa) fasta scores: E(): 1.8e-10, 28.67% id in 265 aa, and to Agrobacterium tumefaciens hypothetical protein atu3118 or agr_l_3383 SWALL:Q8UB98 (EMBL:AE009242) (273 aa) fasta scores: E(): 1e-08, 31.42% id in 245 aa; hypothetical protein 1145978 2663369 BB1063 Bordetella bronchiseptica RB50 hypothetical protein NP_887609.1 1145178 D 257310 CDS NP_887610.1 33600050 2663376 1145984..1146877 1 NC_002927.3 Similar to Ralstonia metallidurans esterase estA SWALL:Q9RBF3 (EMBL:AJ251831) (275 aa) fasta scores: E(): 4.7e-14, 29.03% id in 279 aa, and to Pseudomonas sp. 3-oxoadipate enol-lactone hydrolase catD SWALL:Q8VPF0 (EMBL:AY044272) (262 aa) fasta scores: E(): 4.1e-13, 31.52% id in 276 aa; hydrolase 1146877 2663376 BB1064 Bordetella bronchiseptica RB50 hydrolase NP_887610.1 1145984 D 257310 CDS NP_887611.1 33600051 2662711 1146874..1147881 1 NC_002927.3 Similar to Micromonospora echinospora CalS9 SWALL:AAM70333 (EMBL:AF497482) (329 aa) fasta scores: E(): 9.8e-13, 40.65% id in 182 aa, and to Streptomyces griseus TDP-glucose-4,6-dehydratase homolog GrsE SWALL:Q9X5W0 (EMBL:AF128273) (324 aa) fasta scores: E(): 1.3e-12, 28.09% id in 331 aa; NAD dependent epimerase/dehydratase 1147881 2662711 BB1065 Bordetella bronchiseptica RB50 NAD dependent epimerase/dehydratase NP_887611.1 1146874 D 257310 CDS NP_887612.1 33600052 2663133 1147878..1148783 1 NC_002927.3 Similar to Rhizobium loti hypothetical protein Mll1137 SWALL:Q98L83 (EMBL:AP002996) (291 aa) fasta scores: E(): 4.5e-36, 41.55% id in 296 aa, and to Rhizobium meliloti hypothetical protein transmembrane rb0043 or smb20040 SWALL:Q92XB9 (EMBL:AL603642) (286 aa) fasta scores: E(): 5.1e-36, 42.1% id in 285 aa; hypothetical protein 1148783 2663133 BB1066 Bordetella bronchiseptica RB50 hypothetical protein NP_887612.1 1147878 D 257310 CDS NP_887613.1 33600053 2662702 complement(1148830..1149807) 1 NC_002927.3 Similar to Comamonas testosteroni OrfJ protein SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 9.6e-34, 35.86% id in 329 aa, and to Comamonas testosteroni Orf4 protein SWALL:Q9S155 (EMBL:AB024335) (325 aa) fasta scores: E(): 4e-31, 34.92% id in 315 aa; hypothetical protein 1149807 2662702 BB1067 Bordetella bronchiseptica RB50 hypothetical protein NP_887613.1 1148830 R 257310 CDS NP_887614.1 33600054 2662735 complement(1149804..1151285) 1 NC_002927.3 Similar to Pseudomonas aeruginosa probable aldehyde dehydrogenase pa3504 SWALL:Q9HYA5 (EMBL:AE004771) (494 aa) fasta scores: E(): 4e-65, 44.58% id in 471 aa, and to Rhizobium loti aldehyde dehydrogenase mll2319 SWALL:Q98IP1 (EMBL:AP002999) (498 aa) fasta scores: E(): 5.7e-63, 46.45% id in 480 aa; aldehyde dehydrogenase 1151285 2662735 BB1068 Bordetella bronchiseptica RB50 aldehyde dehydrogenase NP_887614.1 1149804 R 257310 CDS NP_887615.1 33600055 2662729 1151394..1153004 1 NC_002927.3 Similar to Rhizobium loti alcohol dehydrogenase mlr2604 SWALL:Q98I22 (EMBL:AP003000) (538 aa) fasta scores: E(): 3.2e-71, 39.51% id in 534 aa, and to Agrobacterium tumefaciens oxidoreductase, gmc family atu6063 or agr_pti_129 SWALL:Q8U672 (EMBL:AE009425) (541 aa) fasta scores: E(): 4.9e-71, 41.5% id in 530 aa; dehydrogenase 1153004 2662729 BB1069 Bordetella bronchiseptica RB50 dehydrogenase NP_887615.1 1151394 D 257310 CDS NP_887616.1 33600056 2663380 1153037..1153834 1 NC_002927.3 Similar to Yersinia pestis hypothetical protein Ypo3647 SWALL:Q8ZAY5 (EMBL:AJ414158) (275 aa) fasta scores: E(): 3.2e-49, 48.48% id in 264 aa, and to Rhizobium etli hypothetical protein yp053 SWALL:AAM54941 (EMBL:U80928) (169 aa) fasta scores: E(): 3.3e-27, 47.5% id in 160 aa; hypothetical protein 1153834 2663380 BB1070 Bordetella bronchiseptica RB50 hypothetical protein NP_887616.1 1153037 D 257310 CDS NP_887617.1 33600057 2663441 1153989..1154810 1 NC_002927.3 Similar to Bacillus subtilis aliphatic sulfonates transport permease SsuC SWALL:SSUC_BACSU (SWALL:P40401) (276 aa) fasta scores: E(): 3.2e-39, 42.3% id in 260 aa, and to Agrobacterium tumefaciens ABC transporter membrane spanning protein SsuC or atu6057 or agr_pti_116 SWALL:Q8U678 (EMBL:AE009424) (313 aa) fasta scores: E(): 5.3e-54, 58.26% id in 242 aa; ABC transporter permease 1154810 2663441 BB1071 Bordetella bronchiseptica RB50 ABC transporter permease NP_887617.1 1153989 D 257310 CDS NP_887618.1 33600058 2662789 1154823..1155575 1 NC_002927.3 Similar to Pseudomonas putida AtsC SWALL:Q9WWU7 (EMBL:AF126201) (287 aa) fasta scores: E(): 4.9e-39, 51.02% id in 243 aa, and to Agrobacterium tumefaciens ABC transporter nucleotide binding/ATPase SsuB or atu6058 or agr_pti_117 SWALL:Q8U677 (EMBL:AE009424) (267 aa) fasta scores: E(): 1.6e-44, 56.91% id in 246 aa; sulfate ABC transporter ATP-binding protein 1155575 2662789 BB1072 Bordetella bronchiseptica RB50 sulfate ABC transporter ATP-binding protein NP_887618.1 1154823 D 257310 CDS NP_887619.1 33600059 2662741 1155618..1156571 1 NC_002927.3 Similar to Bacillus subtilis aliphatic sulfonates binding protein precursor SsuA SWALL:SSUA_BACSU (SWALL:P40400) (332 aa) fasta scores: E(): 9.8e-19, 28.57% id in 301 aa, and to Agrobacterium tumefaciens ABC transporter substrate-binding protein ssua or atu6059 or agr_pti_119 SWALL:Q8U676 (EMBL:AE009424) (320 aa) fasta scores: E(): 1.1e-37, 36.62% id in 314 aa; substrate binding component of ABC transporter 1156571 2662741 BB1073 Bordetella bronchiseptica RB50 substrate binding component of ABC transporter NP_887619.1 1155618 D 257310 CDS NP_887620.1 33600060 2663868 complement(1156592..1157278) 1 NC_002927.3 Similar to Yersinia pestis GntR-family transcriptional regulatory protein ypo3651 SWALL:Q8ZAY1 (EMBL:AJ414158) (220 aa) fasta scores: E(): 7.9e-24, 40.09% id in 222 aa, and to Rhizobium etli hypothetical protein yp052 SWALL:AAM54940 (EMBL:U80928) (229 aa) fasta scores: E(): 1.6e-27, 42.54% id in 228 aa; GntR family transcriptional regulator 1157278 2663868 BB1074 Bordetella bronchiseptica RB50 GntR family transcriptional regulator NP_887620.1 1156592 R 257310 CDS NP_887621.1 33600061 2662890 1157422..1157829 1 NC_002927.3 Similar to Acinetobacter calcoaceticus 4-carboxymuconolactone decarboxylase PcaC SWALL:DC4C_ACICA (SWALL:P20370) (134 aa) fasta scores: E(): 6.3e-18, 41.6% id in 125 aa, and to Rhizobium etli probable gamma-carboxymuconolactone decarboxylase PcaC1 SWALL:AAM54935 (EMBL:U80928) (158 aa) fasta scores: E(): 5.2e-27, 54.91% id in 122 aa; carboxymuconolactone decarboxylase 1157829 2662890 BB1075 Bordetella bronchiseptica RB50 carboxymuconolactone decarboxylase NP_887621.1 1157422 D 257310 CDS NP_887622.1 33600062 2662788 1157878..1158732 1 NC_002927.3 Similar to Mycobacterium tuberculosis hypothetical protein rv3510c or mtv023.17 or mt3614 SWALL:O53555 (EMBL:AL022022) (278 aa) fasta scores: E(): 2.9e-12, 27.08% id in 288 aa, and to Streptomyces griseus subsp. griseus NonC SWALL:Q9XDF3 (EMBL:AF074603) (317 aa) fasta scores: E(): 2.4e-09, 27.82% id in 248 aa; hypothetical protein 1158732 2662788 BB1076 Bordetella bronchiseptica RB50 hypothetical protein NP_887622.1 1157878 D 257310 CDS NP_887623.1 33600063 2663224 1158738..1159595 1 NC_002927.3 Similar to Sulfolobus solfataricus hypothetical protein sso2112 or c02006 SWALL:P95886 (EMBL:Y08256) (269 aa) fasta scores: E(): 8.8e-10, 28.57% id in 294 aa, and to Mycobacterium tuberculosis hypothetical protein rv2303c or mtcy339.06 or mt2360 SWALL:Q50662 (EMBL:Z77163) (307 aa) fasta scores: E(): 8.9e-16, 27.36% id in 296 aa; hypothetical protein 1159595 2663224 BB1077 Bordetella bronchiseptica RB50 hypothetical protein NP_887623.1 1158738 D 257310 CDS NP_887624.1 33600064 2663465 1159654..1160628 1 NC_002927.3 Similar to Rhizobium meliloti hypothetical protein ra1058 or sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 6.2e-47, 44.69% id in 311 aa, and to Agrobacterium tumefaciens hypothetical protein atu4727 or agr_l_312 SWALL:Q8U6S9 (EMBL:AE009401) (329 aa) fasta scores: E(): 8e-45, 43.12% id in 320 aa; hypothetical protein 1160628 2663465 BB1078 Bordetella bronchiseptica RB50 hypothetical protein NP_887624.1 1159654 D 257310 CDS NP_887625.1 33600065 2663443 1160642..1161904 1 NC_002927.3 Similar to Methanosarcina mazei hydrolase mm2650 SWALL:AAM32346 (EMBL:AE013511) (264 aa) fasta scores: E(): 1.4e-06, 24.4% id in 254 aa, and to Rhizobium etli hypothetical protein yp051 SWALL:AAM54939 (EMBL:U80928) (409 aa) fasta scores: E(): 2.6e-56, 43.6% id in 399 aa; hydrolase 1161904 2663443 BB1079 Bordetella bronchiseptica RB50 hydrolase NP_887625.1 1160642 D 257310 CDS NP_887626.1 33600066 2663851 1162097..1162774 1 NC_002927.3 Similar to Salmonella typhimurium, and Salmonella typhi SlsA or stm3761 or sty4025 SWALL:Q9Z622 (EMBL:AF106566) (226 aa) fasta scores: E(): 1.7e-73, 88.44% id in 225 aa, and to Salmonella typhi hypothetical protein Sty0948 SWALL:Q8Z819 (EMBL:AL627268) (225 aa) fasta scores: E(): 5.5e-74, 89.77% id in 225 aa; isochorismatase 1162774 2663851 BB1080 Bordetella bronchiseptica RB50 isochorismatase NP_887626.1 1162097 D 257310 CDS NP_887627.1 33600067 2662687 1162967..1163911 1 NC_002927.3 Similar to Yersinia pestis LysR family transcriptional regulatory protein ypo2150 SWALL:Q8ZEL4 (EMBL:AJ414151) (301 aa) fasta scores: E(): 3.4e-52, 48.33% id in 300 aa, and to Ralstonia solanacearum probable transcription regulator protein rsp0662 or rs01787 SWALL:Q8XS19 (EMBL:AL646080) (297 aa) fasta scores: E(): 2.2e-52, 49.66% id in 298 aa; LysR family transcriptional regulator 1163911 2662687 BB1081 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_887627.1 1162967 D 257310 CDS NP_887628.1 33600068 2662727 1163966..1164463 1 NC_002927.3 Similar to Clostridium acetobutylicum nh2-acetyltransferase cap0111 SWALL:Q97TJ0 (EMBL:AE001438) (162 aa) fasta scores: E(): 1e-13, 33.33% id in 150 aa, and to Staphylococcus aureus hypothetical protein Mw2581 SWALL:BAB96446 (EMBL:AP004831) (166 aa) fasta scores: E(): 1.1e-11, 28.84% id in 156 aa; acetyltransferase 1164463 2662727 BB1082 Bordetella bronchiseptica RB50 acetyltransferase NP_887628.1 1163966 D 257310 CDS NP_887629.1 33600069 2662734 complement(1164743..1165963) 1 NC_002927.3 Similar to Ralstonia solanacearum hypothetical protein rsc1197 or rs05729 SWALL:Q8Y047 (EMBL:AL646063) (405 aa) fasta scores: E(): 2.1e-60, 44.78% id in 393 aa, and to Caulobacter crescentus hypothetical protein Cc3562 WALL:Q9A2J9 (EMBL:AE006014) (433 aa) fasta scores: E(): 2.5e-68, 47% id in 400 aa; hypothetical protein 1165963 2662734 BB1083 Bordetella bronchiseptica RB50 hypothetical protein NP_887629.1 1164743 R 257310 CDS NP_887630.1 33600070 2662731 complement(1165980..1166579) 1 NC_002927.3 Similar to Streptomyces coelicolor transcriptional regulator sco3833 or sch69.03C SWALL:Q9XA31 (EMBL:AL079308) (209 aa) fasta scores: E(): 5e-10, 33.14% id in 181 aa, and to Azoarcus evansii regulator SWALL:Q9FA56 (EMBL:AJ278756) (194 aa) fasta scores: E(): 5.5e-10, 28.93% id in 197 aa; TetR family transcriptional regulator 1166579 2662731 BB1084 Bordetella bronchiseptica RB50 TetR family transcriptional regulator NP_887630.1 1165980 R 257310 CDS NP_887631.1 33600071 2662714 complement(1166712..1167716) 1 NC_002927.3 Similar to Variovorax paradoxus, and Burkholderia cepacia 2,4-diphenoxyacetic acid gene cluster SWALL:Q9RHQ7 (EMBL:AB028643) (337 aa) fasta scores: E(): 1e-38, 39.55% id in 316 aa, and to Comamonas testosteroni OrfJ protein SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 1e-36, 40.37% id in 317 aa; hypothetical protein 1167716 2662714 BB1085 Bordetella bronchiseptica RB50 hypothetical protein NP_887631.1 1166712 R 257310 CDS NP_887632.1 33600072 2663563 complement(1167779..1168957) 1 NC_002927.3 Similar to Archaeoglobus fulgidus 3-ketoacyl-CoA thiolase af2416 SWALL:O30255 (EMBL:AE001108) (384 aa) fasta scores: E(): 1.7e-41, 39.39% id in 396 aa, and to Methanopyrus kandleri acetyl-CoA acetyltransferase mk1378 SWALL:Q8TVL1 (EMBL:AE010431) (394 aa) fasta scores: E(): 4.2e-39, 37.37% id in 388 aa; thiolase 1168957 2663563 BB1086 Bordetella bronchiseptica RB50 thiolase NP_887632.1 1167779 R 257310 CDS NP_887633.1 33600073 2663634 complement(1168988..1169767) 1 NC_002927.3 Similar to Pseudomonas putida Fadb1X SWALL:Q9AHX8 (EMBL:AF290950) (257 aa) fasta scores: E(): 1.7e-27, 39.53% id in 258 aa, and to Caulobacter crescentus enoyl-CoA hydratase cc0006 SWALL:Q9AC55 (EMBL:AE005675) (262 aa) fasta scores: E(): 1.1e-30, 44.48% id in 254 aa; enoyl-CoA hydratase 1169767 2663634 BB1087 Bordetella bronchiseptica RB50 enoyl-CoA hydratase NP_887633.1 1168988 R 257310 CDS NP_887634.1 33600074 2662753 1169850..1170635 1 NC_002927.3 Similar to Synechocystis sp. 3-oxoacyl-ACP reductase 1 FabG1 or slr0886 SWALL:FAG1_SYNY3 (SWALL:P73574) (247 aa) fasta scores: E(): 1.9e-23, 38.73% id in 253 aa, and to Anabaena sp. 3-oxoacyl-ACP reductase FabG or alr1894 SWALL:Q8YVT0 (EMBL:AP003587) (251 aa) fasta scores: E(): 1.3e-23, 36.61% id in 254 aa; short chain dehydrogenase 1170635 2662753 BB1088 Bordetella bronchiseptica RB50 short chain dehydrogenase NP_887634.1 1169850 D 257310 CDS NP_887635.1 33600075 2662738 1171039..1171833 1 NC_002927.3 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 1171833 2662738 BB1089 Bordetella bronchiseptica RB50 enoyl-CoA hydratase NP_887635.1 1171039 D 257310 CDS NP_887636.1 33600076 2663697 1171833..1172969 1 NC_002927.3 Similar to Rhodococcus sp. AD45 racemase IsoG SWALL:Q9RBP6 (EMBL:AJ249207) (405 aa) fasta scores: E(): 8.5e-41, 35.42% id in 367 aa, and to Streptomyces coelicolor racemase sco0362 or scf41.21 SWALL:Q9RJU8 (EMBL:AL117387) (403 aa) fasta scores: E(): 2.6e-36, 37.13% id in 377 aa; hypothetical protein 1172969 2663697 BB1090 Bordetella bronchiseptica RB50 hypothetical protein NP_887636.1 1171833 D 257310 CDS NP_887637.1 33600077 2663625 1173009..1173923 1 NC_002927.3 Similar to Pseudomonas aeruginosa probable transcriptional regulator pa1998 SWALL:Q9I2B1 (EMBL:AE004626) (306 aa) fasta scores: E(): 2.2e-18, 30.1% id in 289 aa, and to Rhizobium meliloti transcriptional regulator protein rb0123 or smb20123 SWALL:Q92X39 (EMBL:AL603642) (298 aa) fasta scores: E(): 1.2e-20, 28.76% id in 292 aa; LysR family transcriptional regulator 1173923 2663625 BB1091 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_887637.1 1173009 D 257310 CDS NP_887638.1 33600078 2662995 1174036..1175019 1 NC_002927.3 Similar to Rhizobium meliloti hypothetical protein ra1058 or sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 4.7e-37, 35.04% id in 331 aa, and to Xanthomonas axonopodis hypothetical protein Xac2278 SWALL:AAM37131 (EMBL:AE011865) (315 aa) fasta scores: E(): 5.6e-35, 37.07% id in 321 aa; hypothetical protein 1175019 2662995 BB1092 Bordetella bronchiseptica RB50 hypothetical protein NP_887638.1 1174036 D 257310 CDS NP_887639.1 33600079 2663216 1175340..1176317 1 NC_002927.3 Similar to Xanthomonas campestris hypothetical protein Xcc0756 SWALL:AAM40071 (EMBL:AE012175) (347 aa) fasta scores: E(): 8.9e-52, 47.46% id in 316 aa, and to Brucella melitensis hypothetical membrane spanning protein Bmeii0279 SWALL:Q8YD98 (EMBL:AE009666) (331 aa) fasta scores: E(): 6.9e-51, 45.79% id in 321 aa; hypothetical protein 1176317 2663216 BB1093 Bordetella bronchiseptica RB50 hypothetical protein NP_887639.1 1175340 D 257310 CDS NP_887640.1 33600080 2662967 complement(1176298..1176777) 1 NC_002927.3 Similar to Rhizobium loti hypothetical protein Mlr1489 SWALL:Q98KG3 (EMBL:AP002997) (159 aa) fasta scores: E(): 8.3e-12, 31.41% id in 156 aa, and to Pseudomonas aeruginosa hypothetical protein Pa5385 SWALL:Q9HTH9 (EMBL:AE004951) (159 aa) fasta scores: E(): 2.3e-09, 29.67% id in 155 aa; hypothetical protein 1176777 2662967 BB1094 Bordetella bronchiseptica RB50 hypothetical protein NP_887640.1 1176298 R 257310 CDS NP_887641.1 33600081 2663324 complement(1176899..1177870) 1 NC_002927.3 Similar to Rhizobium meliloti hypothetical protein ra1058 or sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 9.8e-50, 48.36% id in 306 aa, and to Comamonas testosteroni OrfJ protein SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 4.9e-42, 40.92% id in 303 aa; hypothetical protein 1177870 2663324 BB1095 Bordetella bronchiseptica RB50 hypothetical protein NP_887641.1 1176899 R 257310 CDS NP_887642.1 33600082 2662772 complement(1177963..1178844) 1 NC_002927.3 Similar to Pseudomonas aeruginosa probable transcriptional regulator pa3594 SWALL:Q9HY32 (EMBL:AE004780) (295 aa) fasta scores: E(): 9.1e-46, 48.74% id in 279 aa, and to Xanthomonas axonopodis transcriptional regulator LysR family xac0316 SWALL:AAM35208 (EMBL:AE011657) (295 aa) fasta scores: E(): 8e-32, 38.56% id in 293 aa; LysR family transcriptional regulator 1178844 2662772 BB1096 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_887642.1 1177963 R 257310 CDS NP_887643.1 33600083 2663882 1178957..1180078 1 NC_002927.3 Similar to Pseudomonas aeruginosa hypothetical protein Pa3592 SWALL:Q9HY34 (EMBL:AE004779) (395 aa) fasta scores: E(): 2.5e-81, 56.78% id in 361 aa, and to Rhizobium meliloti conserved membrane-anchored protein rb0848 or smb21182 SWALL:Q92V66 (EMBL:AL603645) (394 aa) fasta scores: E(): 3.3e-52, 42.89% id in 359 aa; hypothetical protein 1180078 2663882 BB1097 Bordetella bronchiseptica RB50 hypothetical protein NP_887643.1 1178957 D 257310 CDS NP_887644.1 33600084 2663199 1180151..1181809 1 NC_002927.3 Similar to Pseudomonas aeruginosa probable acyl-CoA dehydrogenase pa3593 SWALL:Q9HY33 (EMBL:AE004779) (575 aa) fasta scores: E(): 5e-121, 59.77% id in 542 aa, and to Mycobacterium tuberculosis acyl CoA dehydrogenase fade35 or rv3797 or mtv026.02 or mt3904 SWALL:O53577 (EMBL:AL022076) (593 aa) fasta scores: E(): 1.6e-47, 37.41% id in 564 aa; acyl-CoA dehydrogenase 1181809 2663199 BB1098 Bordetella bronchiseptica RB50 acyl-CoA dehydrogenase NP_887644.1 1180151 D 257310 CDS NP_887645.1 33600085 2662744 1181845..1182840 1 NC_002927.3 Similar to Rhizobium meliloti hypothetical protein ra1058 or sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 7.6e-39, 37.82% id in 312 aa, and to Comamonas testosteroni OrfJ protein SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 7e-38, 37.57% id in 322 aa; no significant database matches; hypothetical protein 1182840 2662744 BB1099 Bordetella bronchiseptica RB50 hypothetical protein NP_887645.1 1181845 D 257310 CDS NP_887646.1 33600086 2662874 1183238..1185994 1 NC_002927.3 P-type ATPase involved in magnesium influx; magnesium-transporting ATPase MgtA 1185994 mgtA 2662874 mgtA Bordetella bronchiseptica RB50 magnesium-transporting ATPase MgtA NP_887646.1 1183238 D 257310 CDS NP_887647.1 33600087 2663207 1186083..1187156 1 NC_002927.3 Similar to Brucella melitensis sensory transduction histidine kinase bmeii0052 SWALL:Q8YDX2 (EMBL:AE009643) (355 aa) fasta scores: E(): 9.4e-55, 51.19% id in 334 aa, and to Xanthomonas axonopodis nodulation protein NodV or xac2149 SWALL:AAM37002 (EMBL:AE011850) (457 aa) fasta scores: E(): 1.9e-60, 51.85% id in 351 aa; two component sensor kinase 1187156 2663207 BB1101 Bordetella bronchiseptica RB50 two component sensor kinase NP_887647.1 1186083 D 257310 CDS NP_887648.1 33600088 2662640 1187153..1187776 1 NC_002927.3 Similar to Xanthomonas axonopodis nodulation protein NodW or xac2150 SWALL:AAM37003 (EMBL:AE011850) (203 aa) fasta scores: E(): 2.3e-50, 70.64% id in 201 aa, and to Brucella melitensis nodulation protein bmeii0051 SWALL:Q8YDX3 (EMBL:AE009643) (212 aa) fasta scores: E(): 2.7e-42, 61.02% id in 195 aa; two component response regulator 1187776 2662640 BB1102 Bordetella bronchiseptica RB50 two component response regulator NP_887648.1 1187153 D 257310 CDS NP_887649.1 33600089 2663114 1188020..1189018 1 NC_002927.3 Similar to Rhizobium meliloti hypothetical protein ra1058 or sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 1.7e-37, 36.94% id in 314 aa, and to Comamonas testosteroni OrfJ protein SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 1e-36, 36.3% id in 325 aa; no significant database matches; hypothetical protein 1189018 2663114 BB1103 Bordetella bronchiseptica RB50 hypothetical protein NP_887649.1 1188020 D 257310 CDS NP_887650.1 33600090 2662757 1189075..1190226 1 NC_002927.3 Similar to Beta vulgaris choline monooxygenase, chloroplast precursor Cmo SWALL:CHMO_BETVU (SWALL:O22553) (446 aa) fasta scores: E(): 4.9e-26, 30.31% id in 376 aa, and to Suaeda liaotungensis choline monooxygenase Cmo SWALL:AAM43920 (EMBL:AF354442) (442 aa) fasta scores: E(): 3.6e-26, 30.25% id in 357 aa; [2Fe-2S] protein 1190226 2662757 BB1104 Bordetella bronchiseptica RB50 [2Fe-2S] protein NP_887650.1 1189075 D 257310 CDS NP_887651.1 33600091 2662745 1190223..1191329 1 NC_002927.3 Similar to Rhizobium loti hypothetical protein Mll9370 SWALL:Q981H8 (EMBL:AP003016) (399 aa) fasta scores: E(): 0.37, 26.56% id in 384 aa, and to Pseudomonas aeruginosa hypothetical protein Pa2597 SWALL:Q9I0P0 (EMBL:AE004688) (383 aa) fasta scores: E(): 1.6, 28.46% id in 260 aa; hypothetical protein 1191329 2662745 BB1105 Bordetella bronchiseptica RB50 hypothetical protein NP_887651.1 1190223 D 257310 CDS NP_887652.1 33600092 2662746 1191364..1191684 1 NC_002927.3 Similar to Rhodococcus erythropolis rhodocoxin ThcC SWALL:THCC_RHOER (SWALL:P43493) (106 aa) fasta scores: E(): 1.8e-12, 43.56% id in 101 aa, and to Corynebacterium glutamicum ferredoxin cgl0549 SWALL:BAB97942 (EMBL:AP005275) (106 aa) fasta scores: E(): 8.4e-13, 46.22% id in 106 aa; ferredoxin 1191684 2662746 BB1106 Bordetella bronchiseptica RB50 ferredoxin NP_887652.1 1191364 D 257310 CDS NP_887653.1 33600093 2663479 1191692..1192942 1 NC_002927.3 Similar to Pseudomonas putida putidaredoxin reductase CamA SWALL:CAMA_PSEPU (SWALL:P16640) (422 aa) fasta scores: E(): 8.9e-64, 49.26% id in 408 aa, and to Acinetobacter sp. EB104 ferredoxin reductase NonO SWALL:Q93SX2 (EMBL:AJ311718) (401 aa) fasta scores: E(): 3.3e-62, 50% id in 400 aa; ferredoxin reductase 1192942 2663479 BB1107 Bordetella bronchiseptica RB50 ferredoxin reductase NP_887653.1 1191692 D 257310 CDS NP_887654.1 33600094 2662843 1192972..1193877 1 NC_002927.3 Similar to Escherichia coli dihydrodipicolinate synthase DapA or b2478 SWALL:DAPA_ECOLI (SWALL:P05640) (292 aa) fasta scores: E(): 1.8e-23, 32.98% id in 285 aa, and to Xanthomonas axonopodis dihydroxydipicolinate synthase DapA or xac1760 SWALL:AAM36624 (EMBL:AE011807) (302 aa) fasta scores: E(): 7.7e-28, 40.22% id in 261 aa; dihydrodipicolinate synthase 1193877 dapA 2662843 dapA Bordetella bronchiseptica RB50 dihydrodipicolinate synthase NP_887654.1 1192972 D 257310 CDS NP_887655.1 33600095 2663180 1193874..1195067 1 NC_002927.3 Similar to Escherichia coli L-lactate dehydrogenase LldD or LctD or b3605 SWALL:LLDD_ECOLI (SWALL:P33232) (396 aa) fasta scores: E(): 1e-45, 38.56% id in 376 aa, and to Pseudomonas putida l MdlB SWALL:MDLB_PSEPU (SWALL:P20932) (393 aa) fasta scores: E(): 2.8e-62, 48.08% id in 391 aa; FMN-dependent dehydrogenase 1195067 lldD 2663180 lldD Bordetella bronchiseptica RB50 FMN-dependent dehydrogenase NP_887655.1 1193874 D 257310 CDS NP_887656.1 33600096 2663442 1195064..1195666 1 NC_002927.3 Similar to Bacillus halodurans hypothetical protein Bh2278 SWALL:YM78_BACHD (SWALL:Q9KAK9) (209 aa) fasta scores: E(): 2.3e-22, 38.07% id in 197 aa, and to Agrobacterium tumefaciens hypothetical protein atu5415 or agr_pat_605 SWALL:Q8UJR1 (EMBL:AE008962) (235 aa) fasta scores: E(): 4.6e-22, 35.46% id in 203 aa; hypothetical protein 1195666 2663442 BB1110 Bordetella bronchiseptica RB50 hypothetical protein NP_887656.1 1195064 D 257310 CDS NP_887657.1 33600097 2663435 1195719..1196555 1 NC_002927.3 Similar to Alcaligenes eutrophus hypothetical 30.8 kDa protein SWALL:Q9L789 (EMBL:AF225972) (279 aa) fasta scores: E(): 3.8e-36, 41.69% id in 259 aa, and to Ralstonia solanacearum probable transcription regulator protein rsc3411 or rs01720 SWALL:Q8XTY4 (EMBL:AL646075) (262 aa) fasta scores: E(): 5.9e-32, 39.76% id in 254 aa; IclR family transcriptional regulator 1196555 2663435 BB1111 Bordetella bronchiseptica RB50 IclR family transcriptional regulator NP_887657.1 1195719 D 257310 CDS NP_887658.1 33600098 2663102 1196612..1197532 1 NC_002927.3 Similar to Escherichia coli cyn operon transcriptional activator CynR or b0338 SWALL:CYNR_ECOLI (SWALL:P27111) (311 aa) fasta scores: E(): 1.2e-13, 28.91% id in 294 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa2206 SWALL:Q9I1R1 (EMBL:AE004647) (315 aa) fasta scores: E(): 1.1e-14, 27.33% id in 289 aa; LysR family transcriptional regulator 1197532 2663102 BB1112 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_887658.1 1196612 D 257310 CDS NP_887659.1 33600099 2663285 1197704..1198501 1 NC_002927.3 Similar to Rhizobium loti probable short chain dehydrogenase mll1981 SWALL:Q98JE4 (EMBL:AP002998) (258 aa) fasta scores: E(): 7.9e-21, 39.83% id in 246 aa, and to Caulobacter crescentus oxidoreductase, short-chain dehydrogenase/reductase family cc2655 SWALL:Q9A514 (EMBL:AE005933) (267 aa) fasta scores: E(): 8.9e-22, 39.39% id in 264 aa; short chain dehydrogenase 1198501 2663285 BB1113 Bordetella bronchiseptica RB50 short chain dehydrogenase NP_887659.1 1197704 D 257310 CDS NP_887660.1 33600100 2663160 1198536..1199513 1 NC_002927.3 Similar to Alcaligenes eutrophus hypothetical 35.6 kDa protein in gbd 5'region precursor SWALL:YGB7_ALCEU (SWALL:Q44018) (327 aa) fasta scores: E(): 3.6e-39, 39.62% id in 318 aa, and to Comamonas testosteroni OrfJ protein SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 5.8e-25, 34.16% id in 281 aa; hypothetical protein 1199513 2663160 BB1114 Bordetella bronchiseptica RB50 hypothetical protein NP_887660.1 1198536 D 257310 CDS NP_887661.1 33600101 2662849 1199515..1200342 1 NC_002927.3 no significant database matches; hypothetical protein 1200342 2662849 BB1115 Bordetella bronchiseptica RB50 hypothetical protein NP_887661.1 1199515 D 257310 CDS NP_887662.1 33600102 2663131 complement(1200356..1201288) 1 NC_002927.3 Similar to Klebsiella pneumoniae nitrilase, bromoxynil-specific Bxn SWALL:NRLB_KLEPO (SWALL:P10045) (349 aa) fasta scores: E(): 4.4e-25, 34.5% id in 313 aa, and to Nicotiana tabacum nitrilase 4 Nit4 SWALL:NRL4_TOBAC (SWALL:Q42965) (349 aa) fasta scores: E(): 3.9e-68, 53.72% id in 309 aa; nitrilase 1201288 2663131 BB1116 Bordetella bronchiseptica RB50 nitrilase NP_887662.1 1200356 R 257310 CDS NP_887663.1 33600103 2663568 complement(1201330..1201692) 1 NC_002927.3 Similar to Streptomyces olivaceus ElmJ SWALL:Q9L4X8 (EMBL:AF263463) (143 aa) fasta scores: E(): 0.0082, 30.47% id in 105 aa, and to Xanthomonas campestris hypothetical protein Xcc2241 SWALL:AAM41520 (EMBL:AE012331) (135 aa) fasta scores: E(): 0.027, 33.01% id in 106 aa; hypothetical protein 1201692 2663568 BB1117 Bordetella bronchiseptica RB50 hypothetical protein NP_887663.1 1201330 R 257310 CDS NP_887664.1 33600104 2663866 complement(1201732..1202700) 1 NC_002927.3 Similar to Variovorax paradoxus, and Burkholderia cepacia 2,4-diphenoxyacetic acid gene cluster SWALL:Q9RHQ7 (EMBL:AB028643) (337 aa) fasta scores: E(): 1e-33, 37.83% id in 296 aa, and to Comamonas testosteroni Orf4 protein SWALL:Q9S155 (EMBL:AB024335) (325 aa) fasta scores: E(): 3.6e-32, 36.57% id in 309 aa; hypothetical protein 1202700 2663866 BB1118 Bordetella bronchiseptica RB50 hypothetical protein NP_887664.1 1201732 R 257310 CDS NP_887665.1 33600105 2663546 1202922..1203815 1 NC_002927.3 Similar to Bacillus subtilis als operon regulatory protein AlsR SWALL:ALSR_BACSU (SWALL:Q04778) (302 aa) fasta scores: E(): 5.4e-36, 36.36% id in 286 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa5029 SWALL:Q9HUE0 (EMBL:AE004916) (301 aa) fasta scores: E(): 1.7e-36, 40.34% id in 290 aa; LysR family transcriptional regulator 1203815 2663546 BB1119 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_887665.1 1202922 D 257310 CDS NP_887666.1 33600106 2663721 complement(1203831..1204457) 1 NC_002927.3 Similar to Ralstonia solanacearum VsrD SWALL:Q45416 (EMBL:U18135) (210 aa) fasta scores: E(): 2.2e-29, 42.85% id in 210 aa, and to Ralstonia solanacearum response regulator transcription regulator protein VsrD or rsc0292 or rs03259 SWALL:Q8Y2P3 (EMBL:AL646058) (210 aa) fasta scores: E(): 2.5e-29, 42.85% id in 210 aa; two-component system response regulator 1204457 2663721 BB1120 Bordetella bronchiseptica RB50 two-component system response regulator NP_887666.1 1203831 R 257310 CDS NP_887667.1 33600107 2663491 complement(1204477..1205466) 1 NC_002927.3 hypothetical protein 1205466 2663491 BB1121 Bordetella bronchiseptica RB50 hypothetical protein NP_887667.1 1204477 R 257310 CDS NP_887668.1 33600108 2663525 1205622..1206719 1 NC_002927.3 two-component system sensor kinase 1206719 2663525 BB1122 Bordetella bronchiseptica RB50 two-component system sensor kinase NP_887668.1 1205622 D 257310 CDS NP_887669.1 33600109 2662795 complement(1206716..1207504) 1 NC_002927.3 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 1207504 2662795 BB1123 Bordetella bronchiseptica RB50 enoyl-CoA hydratase NP_887669.1 1206716 R 257310 CDS NP_887670.1 33600110 2663522 complement(1207524..1208321) 1 NC_002927.3 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 1208321 2663522 BB1124 Bordetella bronchiseptica RB50 enoyl-CoA hydratase NP_887670.1 1207524 R 257310 CDS NP_887671.1 33600111 2663497 complement(1208331..1210208) 1 NC_002927.3 activates fatty acids by binding to coenzyme A; AMP-binding protein 1210208 2663497 BB1125 Bordetella bronchiseptica RB50 AMP-binding protein NP_887671.1 1208331 R 257310 CDS NP_887672.1 33600112 2663578 complement(1210235..1212022) 1 NC_002927.3 acyl-CoA dehydrogenase 1212022 2663578 BB1126 Bordetella bronchiseptica RB50 acyl-CoA dehydrogenase NP_887672.1 1210235 R 257310 CDS NP_887673.1 33600113 2663704 1212140..1213360 1 NC_002927.3 hypothetical protein 1213360 2663704 BB1127 Bordetella bronchiseptica RB50 hypothetical protein NP_887673.1 1212140 D 257310 CDS NP_887674.1 33600114 2663719 1213396..1214034 1 NC_002927.3 hypothetical protein 1214034 2663719 BB1128 Bordetella bronchiseptica RB50 hypothetical protein NP_887674.1 1213396 D 257310 CDS NP_887675.1 33600115 2663732 complement(1214054..1214647) 1 NC_002927.3 hypothetical protein 1214647 2663732 BB1129 Bordetella bronchiseptica RB50 hypothetical protein NP_887675.1 1214054 R 257310 CDS NP_887676.1 33600116 2663716 complement(1214640..1215287) 1 NC_002927.3 hypothetical protein 1215287 2663716 BB1130 Bordetella bronchiseptica RB50 hypothetical protein NP_887676.1 1214640 R 257310 CDS NP_887677.1 33600117 2663790 complement(1215284..1217917) 1 NC_002927.3 hypothetical protein 1217917 2663790 BB1131 Bordetella bronchiseptica RB50 hypothetical protein NP_887677.1 1215284 R 257310 CDS NP_887678.1 33600118 2663549 complement(1217928..1218656) 1 NC_002927.3 hypothetical protein 1218656 2663549 BB1132 Bordetella bronchiseptica RB50 hypothetical protein NP_887678.1 1217928 R 257310 CDS NP_887679.1 33600119 2663550 1218876..1219505 1 NC_002927.3 hypothetical protein 1219505 2663550 BB1133 Bordetella bronchiseptica RB50 hypothetical protein NP_887679.1 1218876 D 257310 CDS NP_887680.1 33600120 2663598 1219610..1220116 1 NC_002927.3 hypothetical protein 1220116 2663598 BB1134 Bordetella bronchiseptica RB50 hypothetical protein NP_887680.1 1219610 D 257310 CDS NP_887681.1 33600121 2663515 complement(1220123..1220512) 1 NC_002927.3 hypothetical protein 1220512 2663515 BB1135 Bordetella bronchiseptica RB50 hypothetical protein NP_887681.1 1220123 R 257310 CDS NP_887682.1 33600122 2663552 complement(1220571..1221650) 1 NC_002927.3 calcium/proton antiporter 1221650 2663552 BB1136 Bordetella bronchiseptica RB50 calcium/proton antiporter NP_887682.1 1220571 R 257310 CDS NP_887683.1 33600123 2663087 1221847..1222278 1 NC_002927.3 hypothetical protein 1222278 2663087 BB1137 Bordetella bronchiseptica RB50 hypothetical protein NP_887683.1 1221847 D 257310 CDS NP_887684.1 33600124 2663532 1222337..1223083 1 NC_002927.3 GntR family transcriptional regulator 1223083 2663532 BB1138 Bordetella bronchiseptica RB50 GntR family transcriptional regulator NP_887684.1 1222337 D 257310 CDS NP_887685.1 33600125 2662719 1223080..1223934 1 NC_002927.3 hypothetical protein 1223934 2662719 BB1139 Bordetella bronchiseptica RB50 hypothetical protein NP_887685.1 1223080 D 257310 CDS NP_887686.1 33600126 2663805 1223931..1224227 1 NC_002927.3 hypothetical protein 1224227 2663805 BB1140 Bordetella bronchiseptica RB50 hypothetical protein NP_887686.1 1223931 D 257310 CDS NP_887687.1 33600127 2663078 complement(1224228..1224890) 1 NC_002927.3 GntR family transcriptional regulator 1224890 2663078 BB1141 Bordetella bronchiseptica RB50 GntR family transcriptional regulator NP_887687.1 1224228 R 257310 CDS NP_887688.1 33600128 2663701 1225152..1226537 1 NC_002927.3 amidase 1226537 2663701 BB1142 Bordetella bronchiseptica RB50 amidase NP_887688.1 1225152 D 257310 CDS NP_887689.1 33600129 2663772 1226540..1227736 1 NC_002927.3 hypothetical protein 1227736 2663772 BB1143 Bordetella bronchiseptica RB50 hypothetical protein NP_887689.1 1226540 D 257310 CDS NP_887690.1 33600130 2663556 1227757..1228560 1 NC_002927.3 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 1228560 2663556 BB1144 Bordetella bronchiseptica RB50 enoyl-CoA hydratase NP_887690.1 1227757 D 257310 CDS NP_887691.1 33600131 2663520 1228640..1229617 1 NC_002927.3 hypothetical protein 1229617 2663520 BB1145 Bordetella bronchiseptica RB50 hypothetical protein NP_887691.1 1228640 D 257310 CDS NP_887692.1 33600132 2663545 1229658..1230515 1 NC_002927.3 nitrate/sulfonate/bicarbonate ABC transporter permease 1230515 2663545 BB1146 Bordetella bronchiseptica RB50 nitrate/sulfonate/bicarbonate ABC transporter permease NP_887692.1 1229658 D 257310 CDS NP_887693.1 33600133 2663028 1230523..1231272 1 NC_002927.3 ABC transporter ATP-binding protein 1231272 2663028 BB1147 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_887693.1 1230523 D 257310 CDS NP_887694.1 33600134 2662998 1231294..1232166 1 NC_002927.3 hypothetical protein 1232166 2662998 BB1148 Bordetella bronchiseptica RB50 hypothetical protein NP_887694.1 1231294 D 257310 CDS NP_887695.1 33600135 2662780 1232195..1232974 1 NC_002927.3 short chain dehydrogenase 1232974 2662780 BB1149 Bordetella bronchiseptica RB50 short chain dehydrogenase NP_887695.1 1232195 D 257310 CDS NP_887696.1 33600136 2663502 complement(1233008..1233805) 1 NC_002927.3 transcriptional regulator 1233805 2663502 BB1150 Bordetella bronchiseptica RB50 transcriptional regulator NP_887696.1 1233008 R 257310 CDS NP_887697.1 33600137 2663537 1234057..1235271 1 NC_002927.3 branched-chain amino acid-binding protein 1235271 2663537 BB1151 Bordetella bronchiseptica RB50 branched-chain amino acid-binding protein NP_887697.1 1234057 D 257310 CDS NP_887698.1 33600138 2663528 1235268..1235747 1 NC_002927.3 hypothetical protein 1235747 2663528 BB1152 Bordetella bronchiseptica RB50 hypothetical protein NP_887698.1 1235268 D 257310 CDS NP_887699.1 33600139 2663584 1235764..1237395 1 NC_002927.3 acetyl-CoA synthetase 1237395 2663584 BB1153 Bordetella bronchiseptica RB50 acetyl-CoA synthetase NP_887699.1 1235764 D 257310 CDS NP_887700.1 33600140 2663738 1237426..1237818 1 NC_002927.3 hypothetical protein 1237818 2663738 BB1154 Bordetella bronchiseptica RB50 hypothetical protein NP_887700.1 1237426 D 257310 CDS NP_887701.1 33600141 2663749 1237812..1238678 1 NC_002927.3 branched chain amino acid ABC transporter permease 1238678 2663749 BB1155 Bordetella bronchiseptica RB50 branched chain amino acid ABC transporter permease NP_887701.1 1237812 D 257310 CDS NP_887702.1 33600142 2663757 1238682..1239644 1 NC_002927.3 branched chain amino acid ABC transporter permease 1239644 2663757 BB1156 Bordetella bronchiseptica RB50 branched chain amino acid ABC transporter permease NP_887702.1 1238682 D 257310 CDS NP_887703.1 33600143 2663765 1239641..1240429 1 NC_002927.3 high-affinity branched-chain amino acid transport ATP-binding protein 1240429 livG 2663765 livG Bordetella bronchiseptica RB50 high-affinity branched-chain amino acid transport ATP-binding protein NP_887703.1 1239641 D 257310 CDS NP_887704.1 33600144 2663798 1240422..1241111 1 NC_002927.3 high-affinity branched-chain amino acid transport ATP-binding protein 1241111 livF 2663798 livF Bordetella bronchiseptica RB50 high-affinity branched-chain amino acid transport ATP-binding protein NP_887704.1 1240422 D 257310 CDS NP_887705.1 33600145 2663029 1241130..1242212 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2883; NADH:flavin oxidoreductase 1242212 2663029 BB1159 Bordetella bronchiseptica RB50 NADH:flavin oxidoreductase NP_887705.1 1241130 D 257310 CDS NP_887706.1 33600146 2662707 complement(1242223..1243104) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2882; lysR family transcriptional regulator 1243104 2662707 BB1160 Bordetella bronchiseptica RB50 lysR family transcriptional regulator NP_887706.1 1242223 R 257310 CDS NP_887707.1 33600147 2663736 1243163..1243858 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2881; hypothetical protein 1243858 2663736 BB1161 Bordetella bronchiseptica RB50 hypothetical protein NP_887707.1 1243163 D 257310 CDS NP_887708.1 33600148 2663789 1243848..1244357 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2880; hypothetical protein 1244357 2663789 BB1162 Bordetella bronchiseptica RB50 hypothetical protein NP_887708.1 1243848 D 257310 CDS NP_887709.1 33600149 2663527 1244354..1245586 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2879; membrane transport protein 1245586 2663527 BB1163 Bordetella bronchiseptica RB50 membrane transport protein NP_887709.1 1244354 D 257310 CDS NP_887710.1 33600150 2663588 complement(1245534..1246436) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2878; LysR family transcriptional regulator 1246436 2663588 BB1164 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_887710.1 1245534 R 257310 CDS NP_887711.1 33600151 2663756 1246589..1247560 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2877; hypothetical protein 1247560 2663756 BB1165 Bordetella bronchiseptica RB50 hypothetical protein NP_887711.1 1246589 D 257310 CDS NP_887712.1 33600152 2663768 1247599..1248972 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2875; amidase 1248972 2663768 BB1166 Bordetella bronchiseptica RB50 amidase NP_887712.1 1247599 D 257310 CDS NP_887713.1 33600153 2663074 complement(1249014..1249715) 1 NC_002927.3 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 1249715 ribE 2663074 ribE Bordetella bronchiseptica RB50 riboflavin synthase subunit alpha NP_887713.1 1249014 R 257310 CDS NP_887714.1 33600154 2662992 1249982..1251019 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2873; hypothetical protein 1251019 2662992 BB1168 Bordetella bronchiseptica RB50 hypothetical protein NP_887714.1 1249982 D 257310 CDS NP_887715.1 33600155 2663083 1251120..1251581 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2872; AsnC family transcriptional regulator 1251581 2663083 BB1169 Bordetella bronchiseptica RB50 AsnC family transcriptional regulator NP_887715.1 1251120 D 257310 CDS NP_887716.1 33600156 2663740 complement(1251597..1252145) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2871; hypothetical protein 1252145 2663740 BB1170 Bordetella bronchiseptica RB50 hypothetical protein NP_887716.1 1251597 R 257310 CDS NP_887717.1 33600157 2663820 complement(1252287..1253777) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2870; acid CoA ligase 1253777 2663820 BB1171 Bordetella bronchiseptica RB50 acid CoA ligase NP_887717.1 1252287 R 257310 CDS NP_887718.1 33600158 2663089 1253883..1254974 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2869; hypothetical protein 1254974 2663089 BB1172 Bordetella bronchiseptica RB50 hypothetical protein NP_887718.1 1253883 D 257310 CDS NP_887719.1 33600159 2662755 complement(1254978..1255760) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2868; ABC transporter 1255760 2662755 BB1173 Bordetella bronchiseptica RB50 ABC transporter NP_887719.1 1254978 R 257310 CDS NP_887720.1 33600160 2663758 complement(1255770..1256558) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2867; ABC transporter ATP-binding protein 1256558 2663758 BB1174 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_887720.1 1255770 R 257310 CDS NP_887721.1 33600161 2663542 complement(1256570..1257646) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2866; hypothetical protein 1257646 2663542 BB1175 Bordetella bronchiseptica RB50 hypothetical protein NP_887721.1 1256570 R 257310 CDS NP_887722.1 33600162 2663521 complement(1257683..1258117) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2865; hypothetical protein 1258117 2663521 BB1176 Bordetella bronchiseptica RB50 hypothetical protein NP_887722.1 1257683 R 257310 CDS NP_887723.1 33600163 2663054 complement(1258114..1259124) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2864; alcohol dehydrogenase 1259124 2663054 BB1177 Bordetella bronchiseptica RB50 alcohol dehydrogenase NP_887723.1 1258114 R 257310 CDS NP_887724.1 33600164 2663495 complement(1259168..1260094) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2863; hypothetical protein 1260094 2663495 BB1178 Bordetella bronchiseptica RB50 hypothetical protein NP_887724.1 1259168 R 257310 CDS NP_887725.1 33600165 2662434 1260381..1260749 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2862; hypothetical protein 1260749 2662434 BB1179 Bordetella bronchiseptica RB50 hypothetical protein NP_887725.1 1260381 D 257310 CDS NP_887726.1 33600166 2662424 1260912..1263338 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2860; cation-transporting ATPase 1263338 2662424 BB1180 Bordetella bronchiseptica RB50 cation-transporting ATPase NP_887726.1 1260912 D 257310 CDS NP_887727.1 33600167 2662385 1263387..1264079 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2859; hypothetical protein 1264079 2662385 BB1181 Bordetella bronchiseptica RB50 hypothetical protein NP_887727.1 1263387 D 257310 CDS NP_887728.1 33600168 2662377 1264152..1265351 1 NC_002927.3 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 1265351 tyrB 2662377 tyrB Bordetella bronchiseptica RB50 aromatic amino acid aminotransferase NP_887728.1 1264152 D 257310 CDS NP_887729.1 33600169 2662334 1265536..1266162 1 NC_002927.3 isochorismatase 1266162 2662334 BB1183 Bordetella bronchiseptica RB50 isochorismatase NP_887729.1 1265536 D 257310 CDS NP_887730.1 33600170 2662323 complement(1266211..1268187) 1 NC_002927.3 hypothetical protein 1268187 2662323 BB1184 Bordetella bronchiseptica RB50 hypothetical protein NP_887730.1 1266211 R 257310 CDS NP_887731.1 33600171 2662292 complement(1268203..1268886) 1 NC_002927.3 hypothetical protein 1268886 2662292 BB1185 Bordetella bronchiseptica RB50 hypothetical protein NP_887731.1 1268203 R 257310 CDS NP_887732.1 33600172 2662275 complement(1268967..1279007) 1 NC_002927.3 hemolysin 1279007 2662275 BB1186 Bordetella bronchiseptica RB50 hemolysin NP_887732.1 1268967 R 257310 CDS NP_887733.1 33600173 2661883 complement(1279258..1279923) 1 NC_002927.3 LuxR family transcriptional regulator 1279923 2661883 BB1187 Bordetella bronchiseptica RB50 LuxR family transcriptional regulator NP_887733.1 1279258 R 257310 CDS NP_887734.1 33600174 2660273 complement(1279945..1281387) 1 NC_002927.3 hemolysin D 1281387 2660273 BB1188 Bordetella bronchiseptica RB50 hemolysin D NP_887734.1 1279945 R 257310 CDS NP_887735.1 33600175 2661729 complement(1281390..1283564) 1 NC_002927.3 ABC transporter 1283564 2661729 BB1189 Bordetella bronchiseptica RB50 ABC transporter NP_887735.1 1281390 R 257310 CDS NP_887736.1 33600176 2660186 complement(1283542..1283757) 1 NC_002927.3 hypothetical protein 1283757 2660186 BB1190 Bordetella bronchiseptica RB50 hypothetical protein NP_887736.1 1283542 R 257310 CDS NP_887737.1 33600177 2660283 complement(1283768..1285237) 1 NC_002927.3 outer membrane protein 1285237 2660283 BB1191 Bordetella bronchiseptica RB50 outer membrane protein NP_887737.1 1283768 R 257310 CDS NP_887738.1 33600178 2662189 complement(1285589..1286779) 1 NC_002927.3 hypothetical protein 1286779 2662189 BB1192 Bordetella bronchiseptica RB50 hypothetical protein NP_887738.1 1285589 R 257310 CDS NP_887739.1 33600179 2660078 1287034..1287360 1 NC_002927.3 transcription regulator ArsR 1287360 arsR 2660078 arsR Bordetella bronchiseptica RB50 transcription regulator ArsR NP_887739.1 1287034 D 257310 CDS NP_887740.1 33600180 2659693 1287357..1288637 1 NC_002927.3 arsenical pump membrane protein 1288637 arsB 2659693 arsB Bordetella bronchiseptica RB50 arsenical pump membrane protein NP_887740.1 1287357 D 257310 CDS NP_887741.1 33600181 2660156 complement(1288678..1289643) 1 NC_002927.3 hypothetical protein 1289643 2660156 BB1195 Bordetella bronchiseptica RB50 hypothetical protein NP_887741.1 1288678 R 257310 CDS NP_887742.1 33600182 2661775 complement(1289687..1290823) 1 NC_002927.3 hypothetical protein 1290823 2661775 BB1196 Bordetella bronchiseptica RB50 hypothetical protein NP_887742.1 1289687 R 257310 CDS NP_887743.1 33600183 2661714 complement(1290853..1291908) 1 NC_002927.3 hypothetical protein 1291908 2661714 BB1197 Bordetella bronchiseptica RB50 hypothetical protein NP_887743.1 1290853 R 257310 CDS NP_887744.1 33600184 2660181 complement(1291923..1292570) 1 NC_002927.3 TetR family transcriptional regulator 1292570 2660181 BB1198 Bordetella bronchiseptica RB50 TetR family transcriptional regulator NP_887744.1 1291923 R 257310 CDS NP_887745.1 33600185 2660189 complement(1292573..1293739) 1 NC_002927.3 acyl-CoA dehydrogenase 1293739 2660189 BB1199 Bordetella bronchiseptica RB50 acyl-CoA dehydrogenase NP_887745.1 1292573 R 257310 CDS NP_887746.1 33600186 2661697 1293953..1294690 1 NC_002927.3 short-chain dehydrogenase 1294690 2661697 BB1200 Bordetella bronchiseptica RB50 short-chain dehydrogenase NP_887746.1 1293953 D 257310 CDS NP_887747.1 33600187 2660207 1294693..1295028 1 NC_002927.3 chaperone 1295028 sugE 2660207 sugE Bordetella bronchiseptica RB50 chaperone NP_887747.1 1294693 D 257310 CDS NP_887748.1 33600188 2662205 1295025..1295645 1 NC_002927.3 TetR family transcriptional regulator 1295645 2662205 BB1202 Bordetella bronchiseptica RB50 TetR family transcriptional regulator NP_887748.1 1295025 D 257310 CDS NP_887749.1 33600189 2661746 complement(1295706..1296590) 1 NC_002927.3 Similar to Rhizobium meliloti hypothetical protein ra1150 or sma2109 SWALL:Q92XU0 (EMBL:AE007300) (308 aa) fasta scores: E(): 2e-76, 70% id in 290 aa, and to Methanosarcina mazei nucleoside-diphosphate-sugar epimerase mm0150 SWALL:AAM29846 (EMBL:AE013236) (289 aa) fasta scores: E(): 8.1e-28, 32.75% id in 290 aa; hypothetical protein 1296590 2661746 BB1203 Bordetella bronchiseptica RB50 hypothetical protein NP_887749.1 1295706 R 257310 CDS NP_887750.1 33600190 2662518 1296698..1297651 1 NC_002927.3 Similar to Rhizobium meliloti probable GstR transcriptional regulator ra1149 or sma2107 SWALL:Q92XU1 (EMBL:AE007300) (301 aa) fasta scores: E(): 4.1e-82, 71.18% id in 295 aa, and to Synechocystis sp. transcriptional regulator slr1245 SWALL:P73778 (EMBL:D90909) (302 aa) fasta scores: E(): 1.8e-37, 37.5% id in 288 aa; LysR family transcriptional regulator 1297651 2662518 BB1204 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_887750.1 1296698 D 257310 CDS NP_887751.1 33600191 2662546 complement(1297681..1299258) 1 NC_002927.3 no significant database matches; hypothetical protein 1299258 2662546 BB1205 Bordetella bronchiseptica RB50 hypothetical protein NP_887751.1 1297681 R 257310 CDS NP_887752.1 33600192 2661648 complement(1299607..1300356) 1 NC_002927.3 no significant database matches; hypothetical protein 1300356 2661648 BB1206 Bordetella bronchiseptica RB50 hypothetical protein NP_887752.1 1299607 R 257310 CDS NP_887753.1 33600193 2662312 1300601..1301395 1 NC_002927.3 hypothetical protein 1301395 2662312 BB1207 Bordetella bronchiseptica RB50 hypothetical protein NP_887753.1 1300601 D 257310 CDS NP_887754.1 33600194 2662384 1301551..1303047 1 NC_002927.3 methyl-accepting chemotaxis protein 1303047 2662384 BB1208 Bordetella bronchiseptica RB50 methyl-accepting chemotaxis protein NP_887754.1 1301551 D 257310 CDS NP_887755.1 33600195 2660139 complement(1303257..1304174) 1 NC_002927.3 LysR family transcriptional regulator 1304174 2660139 BB1209 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_887755.1 1303257 R 257310 CDS NP_887756.1 33600196 2659333 1304283..1304726 1 NC_002927.3 hypothetical protein 1304726 2659333 BB1210 Bordetella bronchiseptica RB50 hypothetical protein NP_887756.1 1304283 D 257310 CDS NP_887757.1 33600197 2661946 1304723..1305172 1 NC_002927.3 hypothetical protein 1305172 2661946 BB1211 Bordetella bronchiseptica RB50 hypothetical protein NP_887757.1 1304723 D 257310 CDS NP_887758.1 33600198 2661186 complement(1305174..1306607) 1 NC_002927.3 hypothetical protein 1306607 2661186 BB1212 Bordetella bronchiseptica RB50 hypothetical protein NP_887758.1 1305174 R 257310 CDS NP_887759.1 33600199 2662587 1306703..1307131 1 NC_002927.3 hypothetical protein 1307131 2662587 BB1213 Bordetella bronchiseptica RB50 hypothetical protein NP_887759.1 1306703 D 257310 CDS NP_887760.1 33600200 2660363 1307306..1308283 1 NC_002927.3 hypothetical protein 1308283 2660363 BB1214 Bordetella bronchiseptica RB50 hypothetical protein NP_887760.1 1307306 D 257310 CDS NP_887761.1 33600201 2660275 1308285..1309943 1 NC_002927.3 hypothetical protein 1309943 2660275 BB1215 Bordetella bronchiseptica RB50 hypothetical protein NP_887761.1 1308285 D 257310 CDS NP_887762.1 33600202 2661771 1309959..1311386 1 NC_002927.3 aldehyde dehydrogenase 1311386 2661771 BB1216 Bordetella bronchiseptica RB50 aldehyde dehydrogenase NP_887762.1 1309959 D 257310 CDS NP_887763.1 33600203 2660203 1311428..1312627 1 NC_002927.3 hypothetical protein 1312627 2660203 BB1217 Bordetella bronchiseptica RB50 hypothetical protein NP_887763.1 1311428 D 257310 CDS NP_887764.1 33600204 2661285 1312644..1313435 1 NC_002927.3 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 1313435 2661285 BB1218 Bordetella bronchiseptica RB50 enoyl-CoA hydratase NP_887764.1 1312644 D 257310 CDS NP_887765.1 33600205 2661737 complement(1313444..1314361) 1 NC_002927.3 LysR family transcriptional regulator 1314361 2661737 BB1219 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_887765.1 1313444 R 257310 CDS NP_887766.1 33600206 2661204 1314427..1316130 1 NC_002927.3 hypothetical protein 1316130 2661204 BB1220 Bordetella bronchiseptica RB50 hypothetical protein NP_887766.1 1314427 D 257310 CDS NP_887767.1 33600207 2661630 complement(1316183..1316461) 1 NC_002927.3 hypothetical protein 1316461 2661630 BB1221 Bordetella bronchiseptica RB50 hypothetical protein NP_887767.1 1316183 R 257310 CDS NP_887768.1 33600208 2662582 1316819..1317070 1 NC_002927.3 hypothetical protein 1317070 2662582 BB1222 Bordetella bronchiseptica RB50 hypothetical protein NP_887768.1 1316819 D 257310 CDS NP_887769.1 33600209 2662373 complement(1317095..1317997) 1 NC_002927.3 no significant database matches; acetyltransferase 1317997 2662373 BB1223 Bordetella bronchiseptica RB50 acetyltransferase NP_887769.1 1317095 R 257310 CDS NP_887770.1 33600210 2662391 1318123..1318914 1 NC_002927.3 streptomycin 3'-adenyltransferase; aminoglycoside resistance protein 1318914 aadA4 2662391 aadA4 Bordetella bronchiseptica RB50 aminoglycoside resistance protein NP_887770.1 1318123 D 257310 CDS NP_887771.1 33600211 2662291 complement(1318920..1320365) 1 NC_002927.3 amidase 1320365 2662291 BB1225 Bordetella bronchiseptica RB50 amidase NP_887771.1 1318920 R 257310 CDS NP_887772.1 33600212 2661888 complement(1320371..1321657) 1 NC_002927.3 hypothetical protein 1321657 2661888 BB1226 Bordetella bronchiseptica RB50 hypothetical protein NP_887772.1 1320371 R 257310 CDS NP_887773.1 33600213 2661898 complement(1321658..1322161) 1 NC_002927.3 hypothetical protein 1322161 2661898 BB1227 Bordetella bronchiseptica RB50 hypothetical protein NP_887773.1 1321658 R 257310 CDS NP_887774.1 33600214 2662495 complement(1322193..1323215) 1 NC_002927.3 C4-dicarboxylate ABC transporter substrate-binding protein 1323215 2662495 BB1228 Bordetella bronchiseptica RB50 C4-dicarboxylate ABC transporter substrate-binding protein NP_887774.1 1322193 R 257310 CDS NP_887775.1 33600215 2659242 complement(1323250..1323870) 1 NC_002927.3 2-hydroxychromene-2-carboxylate isomerase 1323870 2659242 BB1229 Bordetella bronchiseptica RB50 2-hydroxychromene-2-carboxylate isomerase NP_887775.1 1323250 R 257310 CDS NP_887776.1 33600216 2660146 complement(1323921..1324340) 1 NC_002927.3 cyclase 1324340 2660146 BB1230 Bordetella bronchiseptica RB50 cyclase NP_887776.1 1323921 R 257310 CDS NP_887777.1 33600217 2662336 complement(1324542..1325069) 1 NC_002927.3 hypothetical protein 1325069 2662336 BB1231 Bordetella bronchiseptica RB50 hypothetical protein NP_887777.1 1324542 R 257310 CDS NP_887778.1 33600218 2662362 complement(1325107..1325397) 1 NC_002927.3 hypothetical protein 1325397 2662362 BB1232 Bordetella bronchiseptica RB50 hypothetical protein NP_887778.1 1325107 R 257310 CDS NP_887779.1 33600219 2662555 complement(1325394..1326029) 1 NC_002927.3 hypothetical protein 1326029 2662555 BB1233 Bordetella bronchiseptica RB50 hypothetical protein NP_887779.1 1325394 R 257310 CDS NP_887780.1 33600220 2662556 complement(1326026..1327102) 1 NC_002927.3 O6-methylguanine-DNA methyltransferase 1327102 ada 2662556 ada Bordetella bronchiseptica RB50 O6-methylguanine-DNA methyltransferase NP_887780.1 1326026 R 257310 CDS NP_887781.1 33600221 2662451 complement(1327161..1327820) 1 NC_002927.3 DNA-3-methyladenine glycosylase 1 1327820 2662451 BB1235 Bordetella bronchiseptica RB50 DNA-3-methyladenine glycosylase 1 NP_887781.1 1327161 R 257310 CDS NP_887782.1 33600222 2660274 complement(1327922..1328425) 1 NC_002927.3 glyxalase 1328425 2660274 BB1236 Bordetella bronchiseptica RB50 glyxalase NP_887782.1 1327922 R 257310 CDS NP_887783.1 33600223 2662252 complement(1328593..1329750) 1 NC_002927.3 phosphoesterase 1329750 2662252 BB1237 Bordetella bronchiseptica RB50 phosphoesterase NP_887783.1 1328593 R 257310 CDS NP_887784.1 33600224 2662529 1329990..1331378 1 NC_002927.3 cytochrome oxidase subunit I 1331378 cioA 2662529 cioA Bordetella bronchiseptica RB50 cytochrome oxidase subunit I NP_887784.1 1329990 D 257310 CDS NP_887785.1 33600225 2662404 1331380..1332387 1 NC_002927.3 cytochrome oxidase subunit II 1332387 cioB 2662404 cioB Bordetella bronchiseptica RB50 cytochrome oxidase subunit II NP_887785.1 1331380 D 257310 CDS NP_887786.1 33600226 2661765 1332398..1332544 1 NC_002927.3 hypothetical protein 1332544 2661765 BB1240 Bordetella bronchiseptica RB50 hypothetical protein NP_887786.1 1332398 D 257310 CDS NP_887787.1 33600227 2661724 1332561..1333982 1 NC_002927.3 aminotransferase 1333982 2661724 BB1241 Bordetella bronchiseptica RB50 aminotransferase NP_887787.1 1332561 D 257310 CDS NP_887788.1 33600228 2661885 1334134..1334466 1 NC_002927.3 hypothetical protein 1334466 2661885 BB1242 Bordetella bronchiseptica RB50 hypothetical protein NP_887788.1 1334134 D 257310 CDS NP_887789.1 33600229 2660071 complement(1334477..1337638) 1 NC_002927.3 tetrathionate reductase subunit A 1337638 ttrA 2660071 ttrA Bordetella bronchiseptica RB50 tetrathionate reductase subunit A NP_887789.1 1334477 R 257310 CDS NP_887790.1 33600230 2662589 complement(1337665..1338699) 1 NC_002927.3 tetrathionate reductase subunit C 1338699 ttrC 2662589 ttrC Bordetella bronchiseptica RB50 tetrathionate reductase subunit C NP_887790.1 1337665 R 257310 CDS NP_887791.1 33600231 2661838 complement(1338713..1339486) 1 NC_002927.3 tetrathionate reductase subunit B 1339486 ttrB 2661838 ttrB Bordetella bronchiseptica RB50 tetrathionate reductase subunit B NP_887791.1 1338713 R 257310 CDS NP_887792.1 33600232 2659259 1339802..1340155 1 NC_002927.3 hypothetical protein 1340155 2659259 BB1246 Bordetella bronchiseptica RB50 hypothetical protein NP_887792.1 1339802 D 257310 CDS NP_887793.1 33600233 2661831 complement(1340178..1341104) 1 NC_002927.3 hydrolase 1341104 2661831 BB1247 Bordetella bronchiseptica RB50 hydrolase NP_887793.1 1340178 R 257310 CDS NP_887794.1 33600234 2661626 complement(1341430..1343781) 1 NC_002927.3 ATP-dependent protease La 1343781 lon 2661626 lon Bordetella bronchiseptica RB50 ATP-dependent protease La NP_887794.1 1341430 R 257310 CDS NP_887795.1 33600235 2662132 complement(1343778..1344185) 1 NC_002927.3 heat shock protein 1344185 2662132 BB1249 Bordetella bronchiseptica RB50 heat shock protein NP_887795.1 1343778 R 257310 CDS NP_887796.1 33600236 2660176 complement(1344501..1345268) 1 NC_002927.3 Similar to Pseudomonas aeruginosa hypothetical protein Pa0278 SWALL:Q9I6L2 (EMBL:AE004466) (250 aa) fasta scores: E(): 2.7e-37, 57.14% id in 238 aa, and to Rhizobium loti hypothetical protein Mll2193 SWALL:Q98IY4 (EMBL:AP002999) (249 aa) fasta scores: E(): 2.5e-35, 54.25% id in 247 aa; hypothetical protein 1345268 2660176 BB1250 Bordetella bronchiseptica RB50 hypothetical protein NP_887796.1 1344501 R 257310 CDS NP_887797.1 33600237 2659315 complement(1345265..1345615) 1 NC_002927.3 hypothetical protein 1345615 2659315 BB1251 Bordetella bronchiseptica RB50 hypothetical protein NP_887797.1 1345265 R 257310 CDS NP_887798.1 33600238 2661874 1345731..1346636 1 NC_002927.3 LysR family transcriptional regulator 1346636 2661874 BB1252 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_887798.1 1345731 D 257310 CDS NP_887799.1 33600239 2662133 complement(1346633..1347124) 1 NC_002927.3 hypothetical protein 1347124 2662133 BB1253 Bordetella bronchiseptica RB50 hypothetical protein NP_887799.1 1346633 R 257310 CDS NP_887800.1 33600240 2659658 1347223..1348176 1 NC_002927.3 catalyzes the formation of inosine from adenosine; adenosine deaminase 1348176 add 2659658 add Bordetella bronchiseptica RB50 adenosine deaminase NP_887800.1 1347223 D 257310 CDS NP_887801.1 33600241 2660266 complement(1348193..1349155) 1 NC_002927.3 hypothetical protein 1349155 2660266 BB1255 Bordetella bronchiseptica RB50 hypothetical protein NP_887801.1 1348193 R 257310 CDS NP_887802.1 33600242 2661809 complement(1349186..1349815) 1 NC_002927.3 dimethylmenaquinone methyltransferase 1349815 2661809 BB1256 Bordetella bronchiseptica RB50 dimethylmenaquinone methyltransferase NP_887802.1 1349186 R 257310 CDS NP_887803.1 33600243 2661767 complement(1349821..1350540) 1 NC_002927.3 hypothetical protein 1350540 2661767 BB1257 Bordetella bronchiseptica RB50 hypothetical protein NP_887803.1 1349821 R 257310 CDS NP_887804.1 33600244 2659377 1350640..1351347 1 NC_002927.3 transcriptional regulator 1351347 2659377 BB1258 Bordetella bronchiseptica RB50 transcriptional regulator NP_887804.1 1350640 D 257310 CDS NP_887805.1 33600245 2661302 complement(1351361..1352479) 1 NC_002927.3 2-nitropropane dioxygenase 1352479 2661302 BB1259 Bordetella bronchiseptica RB50 2-nitropropane dioxygenase NP_887805.1 1351361 R 257310 CDS NP_887806.1 33600246 2661238 complement(1352476..1353351) 1 NC_002927.3 LysR family transcriptional regulator 1353351 2661238 BB1260 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_887806.1 1352476 R 257310 CDS NP_887807.1 33600247 2660261 complement(1353415..1354359) 1 NC_002927.3 hypothetical protein 1354359 2660261 BB1261 Bordetella bronchiseptica RB50 hypothetical protein NP_887807.1 1353415 R 257310 CDS NP_887808.1 33600248 2661717 complement(1354409..1355212) 1 NC_002927.3 AraC family transcriptional regulator 1355212 2661717 BB1262 Bordetella bronchiseptica RB50 AraC family transcriptional regulator NP_887808.1 1354409 R 257310 CDS NP_887809.1 33600249 2661734 complement(1355261..1357063) 1 NC_002927.3 lipoprotein 1357063 2661734 BB1263 Bordetella bronchiseptica RB50 lipoprotein NP_887809.1 1355261 R 257310 CDS NP_887810.1 33600250 2661705 1357312..1357536 1 NC_002927.3 hypothetical protein 1357536 2661705 BB1264 Bordetella bronchiseptica RB50 hypothetical protein NP_887810.1 1357312 D 257310 CDS NP_887811.1 33600251 2661721 1357662..1358693 1 NC_002927.3 hypothetical protein 1358693 2661721 BB1265 Bordetella bronchiseptica RB50 hypothetical protein NP_887811.1 1357662 D 257310 CDS NP_887812.1 33600252 2660264 complement(1358707..1358925) 1 NC_002927.3 hypothetical protein 1358925 2660264 BB1266 Bordetella bronchiseptica RB50 hypothetical protein NP_887812.1 1358707 R 257310 CDS NP_887813.1 33600253 2659398 1359003..1359485 1 NC_002927.3 hypothetical protein 1359485 2659398 BB1267 Bordetella bronchiseptica RB50 hypothetical protein NP_887813.1 1359003 D 257310 CDS NP_887814.1 33600254 2660191 1359666..1361246 1 NC_002927.3 threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway; threonine dehydratase 1361246 ilvA 2660191 ilvA Bordetella bronchiseptica RB50 threonine dehydratase NP_887814.1 1359666 D 257310 CDS NP_887815.1 33600255 2661682 1361461..1361775 1 NC_002927.3 hypothetical protein 1361775 2661682 BB1269 Bordetella bronchiseptica RB50 hypothetical protein NP_887815.1 1361461 D 257310 CDS NP_887816.1 33600256 2660037 complement(1361798..1362433) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2946; ArsR family transcriptional regulator 1362433 2660037 BB1270 Bordetella bronchiseptica RB50 ArsR family transcriptional regulator NP_887816.1 1361798 R 257310 CDS NP_887817.1 33600257 2660049 1362709..1363875 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2945; acyl-CoA dehydrogenase 1363875 2660049 BB1271 Bordetella bronchiseptica RB50 acyl-CoA dehydrogenase NP_887817.1 1362709 D 257310 CDS NP_887818.1 33600258 2661631 1363889..1364356 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2944; hypothetical protein 1364356 2661631 BB1272 Bordetella bronchiseptica RB50 hypothetical protein NP_887818.1 1363889 D 257310 CDS NP_887819.1 33600259 2661668 1364381..1365370 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2943; hypothetical protein 1365370 2661668 BB1273 Bordetella bronchiseptica RB50 hypothetical protein NP_887819.1 1364381 D 257310 CDS NP_887820.1 33600260 2659352 complement(1365383..1366294) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2942; LysR family transcriptional regulator 1366294 2659352 BB1274 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_887820.1 1365383 R 257310 CDS NP_887821.1 33600261 2660131 1366420..1367541 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2941; racemase 1367541 2660131 BB1275 Bordetella bronchiseptica RB50 racemase NP_887821.1 1366420 D 257310 CDS NP_887822.1 33600262 2660149 complement(1367538..1368770) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2940; integral membrane protein 1368770 2660149 BB1276 Bordetella bronchiseptica RB50 integral membrane protein NP_887822.1 1367538 R 257310 CDS NP_887823.1 33600263 2659243 1368895..1369767 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2939; LysR family transcriptional regulator 1369767 2659243 BB1277 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_887823.1 1368895 D 257310 CDS NP_887824.1 33600264 2660153 1369884..1370489 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2938; hypothetical protein 1370489 2660153 BB1278 Bordetella bronchiseptica RB50 hypothetical protein NP_887824.1 1369884 D 257310 CDS NP_887825.1 33600265 2660205 1370606..1371472 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2937; hypothetical protein 1371472 2660205 BB1279 Bordetella bronchiseptica RB50 hypothetical protein NP_887825.1 1370606 D 257310 CDS NP_887826.1 33600266 2661642 1371654..1372562 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2936; hypothetical protein 1372562 2661642 BB1280 Bordetella bronchiseptica RB50 hypothetical protein NP_887826.1 1371654 D 257310 CDS NP_887827.1 33600267 2661679 1372757..1373968 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2935; two component system sensor kinase 1373968 2661679 BB1281 Bordetella bronchiseptica RB50 two component system sensor kinase NP_887827.1 1372757 D 257310 CDS NP_887828.1 33600268 2661777 1373965..1374519 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2934; two component system response regulator 1374519 2661777 BB1282 Bordetella bronchiseptica RB50 two component system response regulator NP_887828.1 1373965 D 257310 CDS NP_887829.1 33600269 2661727 1374728..1375642 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2933; ubiquinol oxidase polypeptide II 1375642 cyoA 2661727 cyoA Bordetella bronchiseptica RB50 ubiquinol oxidase polypeptide II NP_887829.1 1374728 D 257310 CDS NP_887830.1 33600270 2660236 1375643..1377625 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2932; ubiquinol oxidase subunit I 1377625 cyoB 2660236 cyoB Bordetella bronchiseptica RB50 ubiquinol oxidase subunit I NP_887830.1 1375643 D 257310 CDS NP_887831.1 33600271 2660250 1377629..1378240 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2931; cytochrome O ubiquinol oxidase 1378240 cyoC 2660250 cyoC Bordetella bronchiseptica RB50 cytochrome O ubiquinol oxidase NP_887831.1 1377629 D 257310 CDS NP_887832.1 33600272 2661742 1378240..1378587 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2930; cytochrome 0 ubiquinol oxidase 1378587 cyoD 2661742 cyoD Bordetella bronchiseptica RB50 cytochrome 0 ubiquinol oxidase NP_887832.1 1378240 D 257310 CDS NP_887833.1 33600273 2661928 complement(1378705..1379052) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2929; regulatory protein 1379052 2661928 BB1287 Bordetella bronchiseptica RB50 regulatory protein NP_887833.1 1378705 R 257310 CDS NP_887834.1 33600274 2661881 1379192..1380622 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2928; transport protein 1380622 2661881 BB1288 Bordetella bronchiseptica RB50 transport protein NP_887834.1 1379192 D 257310 CDS NP_887835.1 33600275 2661886 complement(1380654..1381151) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2927; integral membrane protein 1381151 2661886 BB1289 Bordetella bronchiseptica RB50 integral membrane protein NP_887835.1 1380654 R 257310 CDS NP_887836.1 33600276 2660070 complement(1381155..1381910) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2926; hypothetical protein 1381910 2660070 BB1290 Bordetella bronchiseptica RB50 hypothetical protein NP_887836.1 1381155 R 257310 CDS NP_887837.1 33600277 2661884 complement(1381925..1382794) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2925; hypothetical protein 1382794 2661884 BB1291 Bordetella bronchiseptica RB50 hypothetical protein NP_887837.1 1381925 R 257310 CDS NP_887838.1 33600278 2661922 complement(1382806..1383138) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2924; hypothetical protein 1383138 2661922 BB1292 Bordetella bronchiseptica RB50 hypothetical protein NP_887838.1 1382806 R 257310 CDS NP_887839.1 33600279 2661887 1383404..1383841 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2923; lipoprotein 1383841 2661887 BB1293 Bordetella bronchiseptica RB50 lipoprotein NP_887839.1 1383404 D 257310 CDS NP_887840.1 33600280 2661890 1384005..1386203 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2922; TonB-dependent receptor 1386203 bfrG 2661890 bfrG Bordetella bronchiseptica RB50 TonB-dependent receptor NP_887840.1 1384005 D 257310 CDS NP_887841.1 33600281 2661909 1386215..1387684 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2921; hypothetical protein 1387684 2661909 BB1295 Bordetella bronchiseptica RB50 hypothetical protein NP_887841.1 1386215 D 257310 CDS NP_887842.1 33600282 2661917 complement(1387687..1389012) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2920; chromate transport protein 1389012 2661917 BB1296 Bordetella bronchiseptica RB50 chromate transport protein NP_887842.1 1387687 R 257310 CDS NP_887843.1 33600283 2662251 1389131..1389805 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2919; lipoprotein 1389805 2662251 BB1297 Bordetella bronchiseptica RB50 lipoprotein NP_887843.1 1389131 D 257310 CDS NP_887844.1 33600284 2662264 1389927..1390340 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2918; hypothetical protein 1390340 2662264 BB1298 Bordetella bronchiseptica RB50 hypothetical protein NP_887844.1 1389927 D 257310 CDS NP_887845.1 33600285 2662278 complement(1390348..1390800) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2917; hypothetical protein 1390800 2662278 BB1299 Bordetella bronchiseptica RB50 hypothetical protein NP_887845.1 1390348 R 257310 CDS NP_887846.1 33600286 2662282 1390931..1391413 1 NC_002927.3 nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; nucleotide-binding protein 1391413 2662282 BB1300 Bordetella bronchiseptica RB50 nucleotide-binding protein NP_887846.1 1390931 D 257310 CDS NP_887847.1 33600287 2662284 1391553..1391921 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2915; hypothetical protein 1391921 2662284 BB1301 Bordetella bronchiseptica RB50 hypothetical protein NP_887847.1 1391553 D 257310 CDS NP_887848.1 33600288 2662300 1391972..1392499 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2914; RNA polymerase sigma factor 1392499 2662300 BB1302 Bordetella bronchiseptica RB50 RNA polymerase sigma factor NP_887848.1 1391972 D 257310 CDS NP_887849.1 33600289 2662301 1392496..1393299 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2913; hypothetical protein 1393299 2662301 BB1303 Bordetella bronchiseptica RB50 hypothetical protein NP_887849.1 1392496 D 257310 CDS NP_887850.1 33600290 2662308 complement(1393321..1394112) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2725; hypothetical protein 1394112 2662308 BB1304 Bordetella bronchiseptica RB50 hypothetical protein NP_887850.1 1393321 R 257310 CDS NP_887851.1 33600291 2662303 complement(1394144..1394848) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2726; oxidoreductase 1394848 2662303 BB1305 Bordetella bronchiseptica RB50 oxidoreductase NP_887851.1 1394144 R 257310 CDS NP_887852.1 33600292 2662318 complement(1394923..1395723) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2727; cytochrome oxidase biogenesis protein Surf1 1395723 2662318 BB1306 Bordetella bronchiseptica RB50 cytochrome oxidase biogenesis protein Surf1 NP_887852.1 1394923 R 257310 CDS NP_887853.1 33600293 2662327 complement(1395720..1396127) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2728; cytochrome ubiquinol oxidase subunit IV 1396127 2662327 BB1307 Bordetella bronchiseptica RB50 cytochrome ubiquinol oxidase subunit IV NP_887853.1 1395720 R 257310 CDS NP_887854.1 33600294 2662337 complement(1396124..1396762) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2729; cytochrome ubiquinol oxidase subunit III 1396762 2662337 BB1308 Bordetella bronchiseptica RB50 cytochrome ubiquinol oxidase subunit III NP_887854.1 1396124 R 257310 CDS NP_887855.1 33600295 2662344 complement(1396755..1398776) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2730; cytochrome ubiquinol oxidase subunit I 1398776 2662344 BB1309 Bordetella bronchiseptica RB50 cytochrome ubiquinol oxidase subunit I NP_887855.1 1396755 R 257310 CDS NP_887856.1 33600296 2662354 complement(1398813..1399778) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2731; ubiquinol oxidase subunit II 1399778 2662354 BB1310 Bordetella bronchiseptica RB50 ubiquinol oxidase subunit II NP_887856.1 1398813 R 257310 CDS NP_887857.1 33600297 2662365 1400015..1401346 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2732; membrane transport protein 1401346 2662365 BB1311 Bordetella bronchiseptica RB50 membrane transport protein NP_887857.1 1400015 D 257310 CDS NP_887858.1 33600298 2662382 1401454..1401855 1 NC_002927.3 hypothetical protein 1401855 2662382 BB1312 Bordetella bronchiseptica RB50 hypothetical protein NP_887858.1 1401454 D 257310 CDS NP_887859.1 33600299 2662383 complement(1401868..1402854) 1 NC_002927.3 amino-acid dehydratase 1402854 2662383 BB1313 Bordetella bronchiseptica RB50 amino-acid dehydratase NP_887859.1 1401868 R 257310 CDS NP_887860.1 33600300 2662392 complement(1402985..1403788) 1 NC_002927.3 hypothetical protein 1403788 2662392 BB1314 Bordetella bronchiseptica RB50 hypothetical protein NP_887860.1 1402985 R 257310 CDS NP_887861.1 33600301 2662398 complement(1403900..1404325) 1 NC_002927.3 universal stress protein 1404325 2662398 BB1315 Bordetella bronchiseptica RB50 universal stress protein NP_887861.1 1403900 R 257310 CDS NP_887862.1 33600302 2662407 1404504..1405076 1 NC_002927.3 chromate transporter 1405076 2662407 BB1316 Bordetella bronchiseptica RB50 chromate transporter NP_887862.1 1404504 D 257310 CDS NP_887863.1 33600303 2662409 1405073..1405594 1 NC_002927.3 chromate transporter 1405594 2662409 BB1317 Bordetella bronchiseptica RB50 chromate transporter NP_887863.1 1405073 D 257310 CDS NP_887864.1 33600304 2662417 complement(1405615..1406733) 1 NC_002927.3 hypothetical protein 1406733 2662417 BB1318 Bordetella bronchiseptica RB50 hypothetical protein NP_887864.1 1405615 R 257310 CDS NP_887865.1 33600305 2662420 complement(1406870..1407118) 1 NC_002927.3 NAD-dependent formate dehydrogenase subunit delta 1407118 fdsD 2662420 fdsD Bordetella bronchiseptica RB50 NAD-dependent formate dehydrogenase subunit delta NP_887865.1 1406870 R 257310 CDS NP_887866.1 33600306 2662422 complement(1407130..1407960) 1 NC_002927.3 involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth; formate dehydrogenase accessory protein 1407960 fdhD 2662422 fdhD Bordetella bronchiseptica RB50 formate dehydrogenase accessory protein NP_887866.1 1407130 R 257310 CDS NP_887867.1 33600307 2662437 complement(1407976..1410852) 1 NC_002927.3 NAD-dependent formate dehydrogenase subunit alpha 1410852 fdsA 2662437 fdsA Bordetella bronchiseptica RB50 NAD-dependent formate dehydrogenase subunit alpha NP_887867.1 1407976 R 257310 CDS NP_887868.1 33600308 2662469 complement(1410870..1412450) 1 NC_002927.3 NAD-dependent formate dehydrogenase subunit beta 1412450 fdsB 2662469 fdsB Bordetella bronchiseptica RB50 NAD-dependent formate dehydrogenase subunit beta NP_887868.1 1410870 R 257310 CDS NP_887869.1 33600309 2662496 complement(1412447..1413004) 1 NC_002927.3 catalyzes the oxidation of formate to carbon dioxide and hydrogen using NAD or NADP as the acceptor; formate dehydrogenase subunit gamma 1413004 fdsG 2662496 fdsG Bordetella bronchiseptica RB50 formate dehydrogenase subunit gamma NP_887869.1 1412447 R 257310 CDS NP_887870.1 33600310 2662501 1413154..1414260 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2705; molybdenum-binding protein 1414260 2662501 BB1324 Bordetella bronchiseptica RB50 molybdenum-binding protein NP_887870.1 1413154 D 257310 CDS NP_887871.1 33600311 2662505 1414271..1415368 1 NC_002927.3 together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 1415368 moaA 2662505 moaA Bordetella bronchiseptica RB50 molybdenum cofactor biosynthesis protein A NP_887871.1 1414271 D 257310 CDS NP_887872.1 33600312 2662519 complement(1415556..1416761) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2707; molybdopterin cofactor biosynthesis protein 1416761 moeA 2662519 moeA Bordetella bronchiseptica RB50 molybdopterin cofactor biosynthesis protein NP_887872.1 1415556 R 257310 CDS NP_887873.1 33600313 2662537 complement(1416768..1417289) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2708; molybdenum cofactor biosynthesis protein 1417289 moaB 2662537 moaB Bordetella bronchiseptica RB50 molybdenum cofactor biosynthesis protein NP_887873.1 1416768 R 257310 CDS NP_887874.1 33600314 2662540 complement(1417286..1417777) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2709; molybdopterin converting factor 1417777 moaE 2662540 moaE Bordetella bronchiseptica RB50 molybdopterin converting factor NP_887874.1 1417286 R 257310 CDS NP_887875.1 33600315 2662554 complement(1417774..1418025) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2710; molybdopterin converting factor 1418025 moaD 2662554 moaD Bordetella bronchiseptica RB50 molybdopterin converting factor NP_887875.1 1417774 R 257310 CDS NP_887876.1 33600316 2662566 complement(1418006..1418491) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2711; molybdenum cofactor biosynthesis protein 1418491 moaC 2662566 moaC Bordetella bronchiseptica RB50 molybdenum cofactor biosynthesis protein NP_887876.1 1418006 R 257310 CDS NP_887877.1 33600317 2662573 1418627..1422076 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2712; hypothetical protein 1422076 2662573 BB1331 Bordetella bronchiseptica RB50 hypothetical protein NP_887877.1 1418627 D 257310 CDS NP_887878.1 33600318 2662575 1422073..1422978 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2713; hydrolase 1422978 2662575 BB1332 Bordetella bronchiseptica RB50 hydrolase NP_887878.1 1422073 D 257310 CDS NP_887879.1 33600319 2662130 complement(1422988..1423419) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2714; lipoprotein 1423419 2662130 BB1333 Bordetella bronchiseptica RB50 lipoprotein NP_887879.1 1422988 R 257310 CDS NP_887880.1 33600320 2662480 1423658..1424161 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2715; AhpC/TSA-family protein 1424161 2662480 BB1334 Bordetella bronchiseptica RB50 AhpC/TSA-family protein NP_887880.1 1423658 D 257310 CDS NP_887881.1 33600321 2662860 1424173..1425639 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2716; membrane transport protein 1425639 2662860 BB1335 Bordetella bronchiseptica RB50 membrane transport protein NP_887881.1 1424173 D 257310 CDS NP_887882.1 33600322 2662912 complement(1425753..1426628) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2717; hypothetical protein 1426628 2662912 BB1336 Bordetella bronchiseptica RB50 hypothetical protein NP_887882.1 1425753 R 257310 CDS NP_887883.1 33600323 2663486 complement(1426625..1427632) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2718; biotin synthase 1427632 2663486 BB1337 Bordetella bronchiseptica RB50 biotin synthase NP_887883.1 1426625 R 257310 CDS NP_887884.1 33600324 2663334 1428101..1428406 1 NC_002927.3 hypothetical protein 1428406 2663334 BB1338 Bordetella bronchiseptica RB50 hypothetical protein NP_887884.1 1428101 D 257310 CDS NP_887885.1 33600325 2663336 1428470..1428775 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2719; hypothetical protein 1428775 2663336 BB1339 Bordetella bronchiseptica RB50 hypothetical protein NP_887885.1 1428470 D 257310 CDS NP_887886.1 33600326 2663331 1428902..1429492 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2720; TetR family transcriptional regulator 1429492 2663331 BB1340 Bordetella bronchiseptica RB50 TetR family transcriptional regulator NP_887886.1 1428902 D 257310 CDS NP_887887.1 33600327 2663343 complement(1430145..1431038) 1 NC_002927.3 carboxyvinyl-carboxyphosphonate phosphorylmutase 1431038 2663343 BB1341 Bordetella bronchiseptica RB50 carboxyvinyl-carboxyphosphonate phosphorylmutase NP_887887.1 1430145 R 257310 CDS NP_887888.1 33600328 2663647 1431238..1433922 1 NC_002927.3 Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 1433922 acnA 2663647 acnA Bordetella bronchiseptica RB50 aconitate hydratase NP_887888.1 1431238 D 257310 CDS NP_887889.1 33600329 2663211 1433947..1435320 1 NC_002927.3 dihydroorotase-like protein 1435320 2663211 BB1343 Bordetella bronchiseptica RB50 dihydroorotase-like protein NP_887889.1 1433947 D 257310 CDS NP_887890.1 33600330 2663330 1435354..1436073 1 NC_002927.3 hydrolase 1436073 2663330 BB1344 Bordetella bronchiseptica RB50 hydrolase NP_887890.1 1435354 D 257310 CDS NP_887891.1 33600331 2663151 1436084..1437085 1 NC_002927.3 hypothetical protein 1437085 2663151 BB1345 Bordetella bronchiseptica RB50 hypothetical protein NP_887891.1 1436084 D 257310 CDS NP_887892.1 33600332 2662768 1437223..1438242 1 NC_002927.3 hypothetical protein 1438242 2662768 BB1346 Bordetella bronchiseptica RB50 hypothetical protein NP_887892.1 1437223 D 257310 CDS NP_887893.1 33600333 2662980 1438261..1439646 1 NC_002927.3 fumarate reductase flavoprotein subunit 1439646 2662980 BB1347 Bordetella bronchiseptica RB50 fumarate reductase flavoprotein subunit NP_887893.1 1438261 D 257310 CDS NP_887894.1 33600334 2663660 1439643..1441019 1 NC_002927.3 hypothetical protein 1441019 2663660 BB1348 Bordetella bronchiseptica RB50 hypothetical protein NP_887894.1 1439643 D 257310 CDS NP_887895.1 33600335 2663373 1441088..1442083 1 NC_002927.3 hypothetical protein 1442083 2663373 BB1349 Bordetella bronchiseptica RB50 hypothetical protein NP_887895.1 1441088 D 257310 CDS NP_887896.1 33600336 2663134 complement(1442114..1443499) 1 NC_002927.3 hypothetical protein 1443499 2663134 BB1350 Bordetella bronchiseptica RB50 hypothetical protein NP_887896.1 1442114 R 257310 CDS NP_887897.1 33600337 2663448 complement(1443496..1444194) 1 NC_002927.3 GntR family transcriptional regulator 1444194 2663448 BB1351 Bordetella bronchiseptica RB50 GntR family transcriptional regulator NP_887897.1 1443496 R 257310 CDS NP_887898.1 33600338 2663353 1445104..1446111 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1036; aldo/keto reductase 1446111 2663353 BB1352 Bordetella bronchiseptica RB50 aldo/keto reductase NP_887898.1 1445104 D 257310 CDS NP_887899.1 33600339 2663650 complement(1446108..1447751) 1 NC_002927.3 Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase 1447751 lnt 2663650 lnt Bordetella bronchiseptica RB50 apolipoprotein N-acyltransferase NP_887899.1 1446108 R 257310 CDS NP_887900.1 33600340 2663248 complement(1447748..1448650) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1038; magnesium and cobalt efflux protein 1448650 corC 2663248 corC Bordetella bronchiseptica RB50 magnesium and cobalt efflux protein NP_887900.1 1447748 R 257310 CDS NP_887901.1 33600341 2663318 complement(1448776..1449249) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1039; metalloprotease 1449249 2663318 BB1355 Bordetella bronchiseptica RB50 metalloprotease NP_887901.1 1448776 R 257310 CDS NP_887902.1 33600342 2663315 complement(1449239..1450261) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1040; PhoH-like protein 1450261 2663315 BB1356 Bordetella bronchiseptica RB50 PhoH-like protein NP_887902.1 1449239 R 257310 CDS NP_887903.1 33600343 2663852 complement(1450258..1451685) 1 NC_002927.3 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 1451685 2663852 BB1357 Bordetella bronchiseptica RB50 (dimethylallyl)adenosine tRNA methylthiotransferase NP_887903.1 1450258 R 257310 CDS NP_887904.1 33600344 2663167 1451842..1452570 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1042; hypothetical protein 1452570 2663167 BB1358 Bordetella bronchiseptica RB50 hypothetical protein NP_887904.1 1451842 D 257310 CDS NP_887905.1 33600345 2662887 complement(1452733..1453668) 1 NC_002927.3 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 1453668 secF 2662887 secF Bordetella bronchiseptica RB50 preprotein translocase subunit SecF NP_887905.1 1452733 R 257310 CDS NP_887906.1 33600346 2663662 complement(1453718..1455598) 1 NC_002927.3 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 1455598 secD 2663662 secD Bordetella bronchiseptica RB50 preprotein translocase subunit SecD NP_887906.1 1453718 R 257310 CDS NP_887907.1 33600347 2663063 complement(1455665..1456009) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1047; secreted protein 1456009 2663063 BB1361 Bordetella bronchiseptica RB50 secreted protein NP_887907.1 1455665 R 257310 CDS NP_887908.1 33600348 2663862 complement(1456158..1457294) 1 NC_002927.3 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 1457294 tgt 2663862 tgt Bordetella bronchiseptica RB50 queuine tRNA-ribosyltransferase NP_887908.1 1456158 R 257310 CDS NP_887909.1 33600349 2663589 complement(1457291..1458364) 1 NC_002927.3 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 1458364 queA 2663589 queA Bordetella bronchiseptica RB50 S-adenosylmethionine--tRNA ribosyltransferase-isomerase NP_887909.1 1457291 R 257310 CDS NP_887910.1 33600350 2662955 1458522..1459958 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1051; D-alanyl-D-alanine carboxypeptidase 1459958 2662955 BB1364 Bordetella bronchiseptica RB50 D-alanyl-D-alanine carboxypeptidase NP_887910.1 1458522 D 257310 CDS NP_887911.1 33600351 2663024 1460048..1460689 1 NC_002927.3 Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase 1460689 upp 2663024 upp Bordetella bronchiseptica RB50 uracil phosphoribosyltransferase NP_887911.1 1460048 D 257310 CDS NP_887912.1 33600352 2663000 1461346..1464096 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1054; pertactin precursor 1464096 prn 2663000 prn Bordetella bronchiseptica RB50 pertactin precursor NP_887912.1 1461346 D 257310 CDS NP_887913.1 33600353 2663154 complement(1464164..1465585) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1055; siroheme synthase 1465585 cysG 2663154 cysG Bordetella bronchiseptica RB50 siroheme synthase NP_887913.1 1464164 R 257310 CDS NP_887914.1 33600354 2663709 1465850..1466566 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1056; hypothetical protein 1466566 2663709 BB1368 Bordetella bronchiseptica RB50 hypothetical protein NP_887914.1 1465850 D 257310 CDS NP_887915.1 33600355 2663115 1466651..1466968 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1057; hypothetical protein 1466968 2663115 BB1369 Bordetella bronchiseptica RB50 hypothetical protein NP_887915.1 1466651 D 257310 CDS NP_887916.1 33600356 2663081 1467009..1467422 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1058; hypothetical protein 1467422 2663081 BB1370 Bordetella bronchiseptica RB50 hypothetical protein NP_887916.1 1467009 D 257310 CDS NP_887917.1 33600357 2662956 1467424..1467783 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1059; hypothetical protein 1467783 2662956 BB1371 Bordetella bronchiseptica RB50 hypothetical protein NP_887917.1 1467424 D 257310 CDS NP_887918.1 33600358 2662954 complement(1467826..1469370) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1060; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 1469370 ubiD 2662954 ubiD Bordetella bronchiseptica RB50 3-octaprenyl-4-hydroxybenzoate carboxy-lyase NP_887918.1 1467826 R 257310 CDS NP_887919.1 33600359 2662794 1469454..1470284 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1061; transglycosylase 1470284 2662794 BB1373 Bordetella bronchiseptica RB50 transglycosylase NP_887919.1 1469454 D 257310 CDS NP_887920.1 33600360 2663157 complement(1470319..1471473) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1062; aminotransferase 1471473 2663157 BB1374 Bordetella bronchiseptica RB50 aminotransferase NP_887920.1 1470319 R 257310 CDS NP_887921.1 33600361 2663533 1471648..1472388 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1063; hypothetical protein 1472388 2663533 BB1375 Bordetella bronchiseptica RB50 hypothetical protein NP_887921.1 1471648 D 257310 CDS NP_887922.1 33600362 2663534 1472406..1474793 1 NC_002927.3 NAD-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; does not decarboxylate oxaloacetate; malic enzyme 1474793 maeB 2663534 maeB Bordetella bronchiseptica RB50 malic enzyme NP_887922.1 1472406 D 257310 CDS NP_887923.1 33600363 2663310 1474843..1476006 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1065; hypothetical protein 1476006 2663310 BB1377 Bordetella bronchiseptica RB50 hypothetical protein NP_887923.1 1474843 D 257310 CDS NP_887924.1 33600364 2663103 1476003..1476467 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1066; hypothetical protein 1476467 2663103 BB1378 Bordetella bronchiseptica RB50 hypothetical protein NP_887924.1 1476003 D 257310 CDS NP_887925.1 33600365 2662799 complement(1476494..1477234) 1 NC_002927.3 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 1477234 2662799 BB1379 Bordetella bronchiseptica RB50 16S ribosomal RNA methyltransferase RsmE NP_887925.1 1476494 R 257310 CDS NP_887926.1 33600366 2662798 1477429..1479465 1 NC_002927.3 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 1479465 tktA 2662798 tktA Bordetella bronchiseptica RB50 transketolase NP_887926.1 1477429 D 257310 CDS NP_887927.1 33600367 2663383 1479483..1480493 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1000; glyceraldehyde-3-phosphate dehydrogenase 1480493 gap 2663383 gap Bordetella bronchiseptica RB50 glyceraldehyde-3-phosphate dehydrogenase NP_887927.1 1479483 D 257310 CDS NP_887928.1 33600368 2662959 1480611..1481804 1 NC_002927.3 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 1481804 pgk 2662959 pgk Bordetella bronchiseptica RB50 phosphoglycerate kinase NP_887928.1 1480611 D 257310 CDS NP_887929.1 33600369 2662932 complement(1481834..1482607) 1 NC_002927.3 Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-ACP reductase 1482607 fabI 2662932 fabI Bordetella bronchiseptica RB50 enoyl-ACP reductase NP_887929.1 1481834 R 257310 CDS NP_887930.1 33600370 2663348 complement(1482604..1483794) 1 NC_002927.3 AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase 1483794 ackA 2663348 ackA Bordetella bronchiseptica RB50 acetate kinase NP_887930.1 1482604 R 257310 CDS NP_887931.1 33600371 2663293 complement(1483820..1484758) 1 NC_002927.3 catalyzes the formation of acetyl phosphate from acetyl-CoA and phosphate; can also act with other short-chain acyl-CoAs; phosphate acetyltransferase 1484758 2663293 BB1385 Bordetella bronchiseptica RB50 phosphate acetyltransferase NP_887931.1 1483820 R 257310 CDS NP_887932.1 33600372 2662964 complement(1484755..1487085) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1005; hypothetical protein 1487085 2662964 BB1386 Bordetella bronchiseptica RB50 hypothetical protein NP_887932.1 1484755 R 257310 CDS NP_887933.1 33600373 2663352 complement(1487240..1487947) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1006; glutathione S-transferase 1487947 2663352 BB1387 Bordetella bronchiseptica RB50 glutathione S-transferase NP_887933.1 1487240 R 257310 CDS NP_887934.1 33600374 2663220 complement(1487985..1488314) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1008; hypothetical protein 1488314 2663220 BB1388 Bordetella bronchiseptica RB50 hypothetical protein NP_887934.1 1487985 R 257310 CDS NP_887935.1 33600375 2663222 complement(1488346..1488894) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1009; hypothetical protein 1488894 2663222 BB1389 Bordetella bronchiseptica RB50 hypothetical protein NP_887935.1 1488346 R 257310 CDS NP_887936.1 33600376 2663687 complement(1488913..1489398) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1010; acetyltransferase 1489398 2663687 BB1390 Bordetella bronchiseptica RB50 acetyltransferase NP_887936.1 1488913 R 257310 CDS NP_887937.1 33600377 2663201 1489711..1490514 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1011; curved DNA-binding protein 1490514 cbpA 2663201 cbpA Bordetella bronchiseptica RB50 curved DNA-binding protein NP_887937.1 1489711 D 257310 CDS NP_887938.1 33600378 2663128 1490517..1490834 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1012; hypothetical protein 1490834 2663128 BB1392 Bordetella bronchiseptica RB50 hypothetical protein NP_887938.1 1490517 D 257310 CDS NP_887939.1 33600379 2662894 1490880..1491593 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1013; hypothetical protein 1491593 2662894 BB1393 Bordetella bronchiseptica RB50 hypothetical protein NP_887939.1 1490880 D 257310 CDS NP_887940.1 33600380 2663417 1491590..1491934 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1013; hypothetical protein 1491934 2663417 BB1394 Bordetella bronchiseptica RB50 hypothetical protein NP_887940.1 1491590 D 257310 CDS NP_887941.1 33600381 2663349 complement(1491955..1493430) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1014; phosphate transporter 1493430 pitA 2663349 pitA Bordetella bronchiseptica RB50 phosphate transporter NP_887941.1 1491955 R 257310 CDS NP_887942.1 33600382 2662810 1493615..1494265 1 NC_002927.3 forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MogA 1494265 mogA 2662810 mogA Bordetella bronchiseptica RB50 molybdenum cofactor biosynthesis protein MogA NP_887942.1 1493615 D 257310 CDS NP_887943.1 33600383 2662982 1494319..1494654 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1016; hypothetical protein 1494654 2662982 BB1397 Bordetella bronchiseptica RB50 hypothetical protein NP_887943.1 1494319 D 257310 CDS NP_887944.1 33600384 2663011 1494651..1495511 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1017; peptidase 1495511 2663011 BB1398 Bordetella bronchiseptica RB50 peptidase NP_887944.1 1494651 D 257310 CDS NP_887945.1 33600385 2663815 complement(1495528..1495809) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1018; hypothetical protein 1495809 2663815 BB1399 Bordetella bronchiseptica RB50 hypothetical protein NP_887945.1 1495528 R 257310 CDS NP_887946.1 33600386 2663845 complement(1495883..1496146) 1 NC_002927.3 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 1496146 infA 2663845 infA Bordetella bronchiseptica RB50 translation initiation factor IF-1 NP_887946.1 1495883 R 257310 CDS NP_887947.1 33600387 2662814 complement(1496509..1496913) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1512; hypothetical protein 1496913 2662814 BB1401 Bordetella bronchiseptica RB50 hypothetical protein NP_887947.1 1496509 R 257310 CDS NP_887948.1 33600388 2662818 complement(1496987..1498186) 1 NC_002927.3 Catalyzes the reversible two-electron oxidation of formate to carbon dioxide. It allows the assimilation of carbon dioxide and provides energy for growth through oxidative phosphorylation coupled to the reduction of oxygen, nitrate, sulphate or fumarate; formate dehydrogenase 1498186 2662818 BB1402 Bordetella bronchiseptica RB50 formate dehydrogenase NP_887948.1 1496987 R 257310 CDS NP_887949.1 33600389 2662829 complement(1498220..1498546) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1514; hypothetical protein 1498546 2662829 BB1403 Bordetella bronchiseptica RB50 hypothetical protein NP_887949.1 1498220 R 257310 CDS NP_887950.1 33600390 2663393 complement(1498569..1499084) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1515; transporter protein 1499084 2663393 BB1404 Bordetella bronchiseptica RB50 transporter protein NP_887950.1 1498569 R 257310 CDS NP_887951.1 33600391 2662790 complement(1499143..1500369) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1516; formamidase 1500369 fmdA 2662790 fmdA Bordetella bronchiseptica RB50 formamidase NP_887951.1 1499143 R 257310 CDS NP_887952.1 33600392 2663524 complement(1500547..1501677) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1517; LuxR family transcriptional regulator 1501677 2663524 BB1406 Bordetella bronchiseptica RB50 LuxR family transcriptional regulator NP_887952.1 1500547 R 257310 CDS NP_887953.1 33600393 2663478 1501912..1502454 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1518; hypothetical protein 1502454 2663478 BB1407 Bordetella bronchiseptica RB50 hypothetical protein NP_887953.1 1501912 D 257310 CDS NP_887954.1 33600394 2662805 1502630..1503694 1 NC_002927.3 class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis; fructose-1,6-bisphosphate aldolase 1503694 fba 2662805 fba Bordetella bronchiseptica RB50 fructose-1,6-bisphosphate aldolase NP_887954.1 1502630 D 257310 CDS NP_887955.1 33600395 2663001 complement(1503780..1504226) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1520; hypothetical protein 1504226 2663001 BB1409 Bordetella bronchiseptica RB50 hypothetical protein NP_887955.1 1503780 R 257310 CDS NP_887956.1 33600396 2663002 1504452..1505333 1 NC_002927.3 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 1505333 hemH 2663002 hemH Bordetella bronchiseptica RB50 phosphoribosylaminoimidazole-succinocarboxamide synthase NP_887956.1 1504452 D 257310 CDS NP_887957.1 33600397 2663428 1505616..1505912 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1522; hypothetical protein 1505912 2663428 BB1411 Bordetella bronchiseptica RB50 hypothetical protein NP_887957.1 1505616 D 257310 CDS NP_887958.1 33600398 2663464 1505915..1506316 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1523; DNA-binding protein 1506316 2663464 BB1412 Bordetella bronchiseptica RB50 DNA-binding protein NP_887958.1 1505915 D 257310 CDS NP_887959.1 33600399 2662953 1506336..1506572 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1524; hypothetical protein 1506572 2662953 BB1413 Bordetella bronchiseptica RB50 hypothetical protein NP_887959.1 1506336 D 257310 CDS NP_887960.1 33600400 2662815 1506580..1507059 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1525; hypothetical protein 1507059 2662815 BB1414 Bordetella bronchiseptica RB50 hypothetical protein NP_887960.1 1506580 D 257310 CDS NP_887961.1 33600401 2663322 1507243..1507722 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1526; phosphoribosylaminoimidazole carboxylase catalytic subunit 1507722 purE 2663322 purE Bordetella bronchiseptica RB50 phosphoribosylaminoimidazole carboxylase catalytic subunit NP_887961.1 1507243 D 257310 CDS NP_887962.1 33600402 2663460 1507725..1508915 1 NC_002927.3 With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit 1508915 purK 2663460 purK Bordetella bronchiseptica RB50 phosphoribosylaminoimidazole carboxylase ATPase subunit NP_887962.1 1507725 D 257310 CDS NP_887963.1 33600403 2662958 1508935..1509972 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1528; hypothetical protein 1509972 2662958 BB1417 Bordetella bronchiseptica RB50 hypothetical protein NP_887963.1 1508935 D 257310 CDS NP_887964.1 33600404 2663258 1510109..1511131 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1529; amino acid ABC transporter substrate-binding protein 1511131 2663258 BB1418 Bordetella bronchiseptica RB50 amino acid ABC transporter substrate-binding protein NP_887964.1 1510109 D 257310 CDS NP_887965.1 33600405 2662986 1511223..1512059 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1530; IclR family transcriptional regulator 1512059 2662986 BB1419 Bordetella bronchiseptica RB50 IclR family transcriptional regulator NP_887965.1 1511223 D 257310 CDS NP_887966.1 33600406 2663193 1512252..1513157 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1531; arginase 1513157 2663193 BB1420 Bordetella bronchiseptica RB50 arginase NP_887966.1 1512252 D 257310 CDS NP_887967.1 33600407 2663253 1513184..1513975 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1532; amino acid ABC transporter substrate-binding protein 1513975 2663253 BB1421 Bordetella bronchiseptica RB50 amino acid ABC transporter substrate-binding protein NP_887967.1 1513184 D 257310 CDS NP_887968.1 33600408 2663877 1513998..1514690 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1533; amino acid ABC transporter permease 1514690 2663877 BB1422 Bordetella bronchiseptica RB50 amino acid ABC transporter permease NP_887968.1 1513998 D 257310 CDS NP_887969.1 33600409 2662997 1514712..1515464 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1534; amino acid ABC transporter ATP-binding protein 1515464 2662997 BB1423 Bordetella bronchiseptica RB50 amino acid ABC transporter ATP-binding protein NP_887969.1 1514712 D 257310 CDS NP_887970.1 33600410 2663629 1515593..1517152 1 NC_002927.3 thiamine-pyrophosphate requiring enzyme; hypothetical protein 1517152 2663629 BB1424 Bordetella bronchiseptica RB50 hypothetical protein NP_887970.1 1515593 D 257310 CDS NP_887971.1 33600411 2663880 1517184..1517729 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1536; hypothetical protein 1517729 2663880 BB1425 Bordetella bronchiseptica RB50 hypothetical protein NP_887971.1 1517184 D 257310 CDS NP_887972.1 33600412 2663174 complement(1517869..1519125) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1537; glutaryl-CoA dehydrogenase 1519125 gcdH 2663174 gcdH Bordetella bronchiseptica RB50 glutaryl-CoA dehydrogenase NP_887972.1 1517869 R 257310 CDS NP_887973.1 33600413 2663143 complement(1519142..1520836) 1 NC_002927.3 catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; also known as acetolactate synthase large subunit; thiamine pyrophosphate protein 1520836 ilvG 2663143 ilvG Bordetella bronchiseptica RB50 thiamine pyrophosphate protein NP_887973.1 1519142 R 257310 CDS NP_887974.1 33600414 2662968 1520994..1521881 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1539; LysR family transcriptional regulator 1521881 2662968 BB1428 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_887974.1 1520994 D 257310 CDS NP_887975.1 33600415 2663346 1521919..1522851 1 NC_002927.3 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerD 1522851 xerD 2663346 xerD Bordetella bronchiseptica RB50 site-specific tyrosine recombinase XerD NP_887975.1 1521919 D 257310 CDS NP_887976.1 33600416 2662931 1522865..1523353 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1541; hypothetical protein 1523353 2662931 BB1430 Bordetella bronchiseptica RB50 hypothetical protein NP_887976.1 1522865 D 257310 CDS NP_887977.1 33600417 2663217 1523422..1524051 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1542; hypothetical protein 1524051 2663217 BB1431 Bordetella bronchiseptica RB50 hypothetical protein NP_887977.1 1523422 D 257310 CDS NP_887978.1 33600418 2663456 1524113..1524514 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1543; hypothetical protein 1524514 2663456 BB1432 Bordetella bronchiseptica RB50 hypothetical protein NP_887978.1 1524113 D 257310 CDS NP_887979.1 33600419 2662994 complement(1524521..1525300) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1545; D-alanyl-D-alanine carboxypeptidase 1525300 pbpG 2662994 pbpG Bordetella bronchiseptica RB50 D-alanyl-D-alanine carboxypeptidase NP_887979.1 1524521 R 257310 CDS NP_887980.1 33600420 2663477 1525299..1525559 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1545A; hypothetical protein 1525559 2663477 BB1434 Bordetella bronchiseptica RB50 hypothetical protein NP_887980.1 1525299 D 257310 CDS NP_887981.1 33600421 2663395 1526320..1527522 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1546; hypothetical protein 1527522 2663395 BB1435 Bordetella bronchiseptica RB50 hypothetical protein NP_887981.1 1526320 D 257310 CDS NP_887982.1 33600422 2663638 1527726..1530386 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1547; hypothetical protein 1530386 2663638 BB1436 Bordetella bronchiseptica RB50 hypothetical protein NP_887982.1 1527726 D 257310 CDS NP_887983.1 33600423 2662751 1530399..1533803 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1548; nuclease/helicase 1533803 2662751 BB1437 Bordetella bronchiseptica RB50 nuclease/helicase NP_887983.1 1530399 D 257310 CDS NP_887984.2 161609280 2662830 1534507..1536603 1 NC_002927.3 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau 1536603 dnaX 2662830 dnaX Bordetella bronchiseptica RB50 DNA polymerase III subunits gamma and tau NP_887984.2 1534507 D 257310 CDS NP_887985.1 33600425 2662831 1536650..1536976 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1550; hypothetical protein 1536976 2662831 BB1439 Bordetella bronchiseptica RB50 hypothetical protein NP_887985.1 1536650 D 257310 CDS NP_887986.1 33600426 2663010 1537026..1537634 1 NC_002927.3 involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 1537634 recR 2663010 recR Bordetella bronchiseptica RB50 recombination protein RecR NP_887986.1 1537026 D 257310 CDS NP_887987.1 33600427 2662862 1537709..1538959 1 NC_002927.3 hypothetical protein 1538959 2662862 BB1441 Bordetella bronchiseptica RB50 hypothetical protein NP_887987.1 1537709 D 257310 CDS NP_887988.1 33600428 2663375 1539065..1540105 1 NC_002927.3 hypothetical protein 1540105 2663375 BB1442 Bordetella bronchiseptica RB50 hypothetical protein NP_887988.1 1539065 D 257310 CDS NP_887989.1 33600429 2663257 1540098..1540907 1 NC_002927.3 ABC transporter ATP-binding protein 1540907 2663257 BB1443 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_887989.1 1540098 D 257310 CDS NP_887990.1 33600430 2662950 1540911..1541705 1 NC_002927.3 transmembrane permease ABC transporter protein 1541705 2662950 BB1444 Bordetella bronchiseptica RB50 transmembrane permease ABC transporter protein NP_887990.1 1540911 D 257310 CDS NP_887991.2 161609279 2663299 complement(1541747..1542709) 1 NC_002927.3 Maintains the balance of metabolites in the pentose-phosphate pathway; transaldolase B 1542709 talB 2663299 talB Bordetella bronchiseptica RB50 transaldolase B NP_887991.2 1541747 R 257310 CDS NP_887992.1 33600432 2663627 1543047..1544090 1 NC_002927.3 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 1544090 carA 2663627 carA Bordetella bronchiseptica RB50 carbamoyl phosphate synthase small subunit NP_887992.1 1543047 D 257310 CDS NP_887993.1 33600433 2663320 1544101..1547343 1 NC_002927.3 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 1547343 carB 2663320 carB Bordetella bronchiseptica RB50 carbamoyl phosphate synthase large subunit NP_887993.1 1544101 D 257310 CDS NP_887994.1 33600434 2662809 1547495..1548259 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1454; short chain dehydrogenase 1548259 2662809 BB1448 Bordetella bronchiseptica RB50 short chain dehydrogenase NP_887994.1 1547495 D 257310 CDS NP_887995.1 33600435 2663379 complement(1548440..1549084) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1455; phosphoglycerate mutase 1549084 gpmB 2663379 gpmB Bordetella bronchiseptica RB50 phosphoglycerate mutase NP_887995.1 1548440 R 257310 CDS NP_887996.1 33600436 2662972 complement(1549095..1549994) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1456; LysR family transcriptional regulator 1549994 2662972 BB1450 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_887996.1 1549095 R 257310 CDS NP_887997.1 33600437 2662870 complement(1550042..1551127) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1457; ABC transporter ATP-binding protein 1551127 2662870 BB1451 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_887997.1 1550042 R 257310 CDS NP_887998.1 33600438 2663485 complement(1551124..1552833) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1458; ABC transporter permease 1552833 2663485 BB1452 Bordetella bronchiseptica RB50 ABC transporter permease NP_887998.1 1551124 R 257310 CDS NP_887999.1 33600439 2663124 complement(1552910..1554232) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2271; regulatory lipoprotein 1554232 2663124 BB1453 Bordetella bronchiseptica RB50 regulatory lipoprotein NP_887999.1 1552910 R 257310 CDS NP_888000.1 33600440 2663564 1554784..1556097 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2269; xanthine/uracil family permease 1556097 2663564 BB1455 Bordetella bronchiseptica RB50 xanthine/uracil family permease NP_888000.1 1554784 D 257310 CDS NP_888001.1 33600441 2663289 complement(1556128..1557759) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2268; methyl-accepting chemotaxis protein 1557759 2663289 BB1456 Bordetella bronchiseptica RB50 methyl-accepting chemotaxis protein NP_888001.1 1556128 R 257310 CDS NP_888002.1 33600442 2663605 1558389..1558865 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2267; transcription elongation factor 1558865 greA 2663605 greA Bordetella bronchiseptica RB50 transcription elongation factor NP_888002.1 1558389 D 257310 CDS NP_888003.1 33600443 2663654 complement(1559220..1559822) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1079; hypothetical protein 1559822 2663654 BB1458 Bordetella bronchiseptica RB50 hypothetical protein NP_888003.1 1559220 R 257310 CDS NP_888004.1 33600444 2663275 1559841..1560473 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1078; ribosomal RNA large subunit methyltransferase j 1560473 rrmJ 2663275 rrmJ Bordetella bronchiseptica RB50 ribosomal RNA large subunit methyltransferase j NP_888004.1 1559841 D 257310 CDS NP_888005.1 33600445 2662820 1560711..1562597 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1077; cell division protein 1562597 ftsH 2662820 ftsH Bordetella bronchiseptica RB50 cell division protein NP_888005.1 1560711 D 257310 CDS NP_888006.1 33600446 2662898 1562616..1563458 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1076; dihydropteroate synthase 1563458 folP 2662898 folP Bordetella bronchiseptica RB50 dihydropteroate synthase NP_888006.1 1562616 D 257310 CDS NP_888007.1 33600447 2663878 1563455..1564813 1 NC_002927.3 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 1564813 glmM 2663878 glmM Bordetella bronchiseptica RB50 phosphoglucosamine mutase NP_888007.1 1563455 D 257310 CDS NP_888008.1 33600448 2663582 1565034..1565828 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1074; hypothetical protein 1565828 2663582 BB1463 Bordetella bronchiseptica RB50 hypothetical protein NP_888008.1 1565034 D 257310 CDS NP_888009.1 33600449 2662872 complement(1566134..1567627) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1073; exopolyphosphatase 1567627 ppx 2662872 ppx Bordetella bronchiseptica RB50 exopolyphosphatase NP_888009.1 1566134 R 257310 CDS NP_888010.1 33600450 2662961 1567863..1569944 1 NC_002927.3 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 1569944 ppk 2662961 ppk Bordetella bronchiseptica RB50 polyphosphate kinase NP_888010.1 1567863 D 257310 CDS NP_888011.1 33600451 2662979 1570139..1571179 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1071; phosphate ABC transporter substrate-binding portein 1571179 pstS 2662979 pstS Bordetella bronchiseptica RB50 phosphate ABC transporter substrate-binding portein NP_888011.1 1570139 D 257310 CDS NP_888012.1 33600452 2663135 1571314..1572330 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1070; phosphate ABC transporter permease 1572330 pstC 2663135 pstC Bordetella bronchiseptica RB50 phosphate ABC transporter permease NP_888012.1 1571314 D 257310 CDS NP_888013.1 33600453 2662943 1572352..1573209 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1069; phosphate ABC transporter permease 1573209 pstA 2662943 pstA Bordetella bronchiseptica RB50 phosphate ABC transporter permease NP_888013.1 1572352 D 257310 CDS NP_888014.1 33600454 2663444 1573206..1574030 1 NC_002927.3 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein 1574030 pstB 2663444 pstB Bordetella bronchiseptica RB50 phosphate transporter ATP-binding protein NP_888014.1 1573206 D 257310 CDS NP_888015.1 33600455 2662873 complement(1574264..1575265) 1 NC_002927.3 Similar to Pseudomonas aeruginosa hypothetical protein Pa1166 SWALL:Q9I4H1 (EMBL:AE004547) (262 aa) fasta scores: E(): 0.00026, 26.66% id in 240 aa, and to Methanosarcina acetivorans predicted protein ma0077 SWALL:Q8TUJ0 (EMBL:AE010664) (288 aa) fasta scores: E(): 0.0024, 28.37% id in 215 aa; hypothetical protein 1575265 2662873 BB1470 Bordetella bronchiseptica RB50 hypothetical protein NP_888015.1 1574264 R 257310 CDS NP_888016.1 33600456 2663283 complement(1575274..1576242) 1 NC_002927.3 Similar to Comamonas testosteroni OrfJ protein SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 6.2e-30, 35.43% id in 302 aa, and to Rhizobium meliloti hypothetical protein ra1058 or sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 5.6e-29, 33.33% id in 324 aa; hypothetical protein 1576242 2663283 BB1471 Bordetella bronchiseptica RB50 hypothetical protein NP_888016.1 1575274 R 257310 CDS NP_888017.1 33600457 2663182 complement(1576283..1576630) 1 NC_002927.3 Similar to Pseudomonas aeruginosa hypothetical protein Pa1917 SWALL:Q9I2I7 (EMBL:AE004617) (115 aa) fasta scores: E(): 7.9e-16, 44.82% id in 116 aa, and to Rhizobium meliloti hypothetical protein ra1014 or sma1840 SWALL:Q92Y73 (EMBL:AE007287) (117 aa) fasta scores: E(): 5.4e-08, 39.08% id in 87 aa; hypothetical protein 1576630 2663182 BB1472 Bordetella bronchiseptica RB50 hypothetical protein NP_888017.1 1576283 R 257310 CDS NP_888018.1 33600458 2663686 complement(1576648..1578006) 1 NC_002927.3 Similar to Escherichia coli probable oxidoreductase OrdL or b1301 SWALL:ORDL_ECOLI (SWALL:P37906) (426 aa) fasta scores: E(): 2.8e-23, 30.66% id in 437 aa, and to Agrobacterium tumefaciens oxidoreductase OrdL or atu3404 or agr_l_2836 SWALL:Q8UAH0 (EMBL:AE009271) (424 aa) fasta scores: E(): 5.8e-34, 32.42% id in 404 aa; oxidoreductase 1578006 2663686 BB1473 Bordetella bronchiseptica RB50 oxidoreductase NP_888018.1 1576648 R 257310 CDS NP_888019.1 33600459 2663184 1578153..1578671 1 NC_002927.3 Similar to Brucella melitensis transcriptional regulator, MerR family bmeii0372 SWALL:Q8YD05 (EMBL:AE009674) (182 aa) fasta scores: E(): 1.2e-22, 41.37% id in 174 aa, and to Pseudomonas aeruginosa probable transcriptional regulator Pa5301 SWALL:Q9HTQ3 (EMBL:AE004943) (182 aa) fasta scores: E(): 4.6e-22, 39.2% id in 176 aa; DNA-binding protein 1578671 2663184 BB1474 Bordetella bronchiseptica RB50 DNA-binding protein NP_888019.1 1578153 D 257310 CDS NP_888020.1 33600460 2662769 1579051..1579749 1 NC_002927.3 hypothetical protein 1579749 2662769 BB1475 Bordetella bronchiseptica RB50 hypothetical protein NP_888020.1 1579051 D 257310 CDS NP_888021.1 33600461 2663068 1579753..1581522 1 NC_002927.3 gluconate dehydrogenase 1581522 2663068 BB1476 Bordetella bronchiseptica RB50 gluconate dehydrogenase NP_888021.1 1579753 D 257310 CDS NP_888022.1 33600462 2663839 1581533..1582888 1 NC_002927.3 cytochrome C precursor 1582888 2663839 BB1477 Bordetella bronchiseptica RB50 cytochrome C precursor NP_888022.1 1581533 D 257310 CDS NP_888023.1 33600463 2663601 complement(1582900..1583640) 1 NC_002927.3 carbonic anhydrase precursor 1583640 2663601 BB1478 Bordetella bronchiseptica RB50 carbonic anhydrase precursor NP_888023.1 1582900 R 257310 CDS NP_888024.1 33600464 2663583 complement(1583738..1584685) 1 NC_002927.3 regulatory protein 1584685 2663583 BB1479 Bordetella bronchiseptica RB50 regulatory protein NP_888024.1 1583738 R 257310 CDS NP_888025.1 33600465 2663761 1584851..1585990 1 NC_002927.3 NAD-dependent 4-hydroxybutyrate dehydrogenase 1585990 gbd 2663761 gbd Bordetella bronchiseptica RB50 NAD-dependent 4-hydroxybutyrate dehydrogenase NP_888025.1 1584851 D 257310 CDS NP_888026.1 33600466 2663769 1586033..1587613 1 NC_002927.3 ketoglutarate semialdehyde dehydrogenase 1587613 2663769 BB1481 Bordetella bronchiseptica RB50 ketoglutarate semialdehyde dehydrogenase NP_888026.1 1586033 D 257310 CDS NP_888027.1 33600467 2663819 1587712..1588170 1 NC_002927.3 hypothetical protein 1588170 2663819 BB1482 Bordetella bronchiseptica RB50 hypothetical protein NP_888027.1 1587712 D 257310 CDS NP_888028.1 33600468 2663791 1588244..1588987 1 NC_002927.3 hypothetical protein 1588987 2663791 BB1483 Bordetella bronchiseptica RB50 hypothetical protein NP_888028.1 1588244 D 257310 CDS NP_888029.1 33600469 2663804 1589263..1590114 1 NC_002927.3 branched chain amino acid ABC transporter ATP-binding protein 1590114 2663804 BB1484 Bordetella bronchiseptica RB50 branched chain amino acid ABC transporter ATP-binding protein NP_888029.1 1589263 D 257310 CDS NP_888030.1 33600470 2663007 1590107..1590811 1 NC_002927.3 branched chain amino acid ABC transporter ATP-binding protein 1590811 2663007 BB1485 Bordetella bronchiseptica RB50 branched chain amino acid ABC transporter ATP-binding protein NP_888030.1 1590107 D 257310 CDS NP_888031.1 33600471 2663557 1590815..1591702 1 NC_002927.3 high-affinity branched-chain amino acid transporter membrane protein 1591702 2663557 BB1486 Bordetella bronchiseptica RB50 high-affinity branched-chain amino acid transporter membrane protein NP_888031.1 1590815 D 257310 CDS NP_888032.1 33600472 2663496 1591710..1592723 1 NC_002927.3 branched chain amino acid ABC transporter 1592723 2663496 BB1487 Bordetella bronchiseptica RB50 branched chain amino acid ABC transporter NP_888032.1 1591710 D 257310 CDS NP_888033.1 33600473 2662985 1592807..1594033 1 NC_002927.3 branched chain amino-acid ABC transporter substrate-binding protein 1594033 2662985 BB1488 Bordetella bronchiseptica RB50 branched chain amino-acid ABC transporter substrate-binding protein NP_888033.1 1592807 D 257310 CDS NP_888034.1 33600474 2662976 complement(1594058..1594780) 1 NC_002927.3 high-affinity branched-chain amino acid transporter ATP-binding protein 1594780 2662976 BB1489 Bordetella bronchiseptica RB50 high-affinity branched-chain amino acid transporter ATP-binding protein NP_888034.1 1594058 R 257310 CDS NP_888035.1 33600475 2663298 complement(1594777..1595511) 1 NC_002927.3 branched chain amino acid ABC transporter ATP-binding protein 1595511 2663298 BB1490 Bordetella bronchiseptica RB50 branched chain amino acid ABC transporter ATP-binding protein NP_888035.1 1594777 R 257310 CDS NP_888036.1 33600476 2663645 complement(1595508..1596455) 1 NC_002927.3 high-affinity branched-chain amino acid transporter membrane protein 1596455 2663645 BB1491 Bordetella bronchiseptica RB50 high-affinity branched-chain amino acid transporter membrane protein NP_888036.1 1595508 R 257310 CDS NP_888037.1 33600477 2663431 complement(1596452..1597315) 1 NC_002927.3 high-affinity branched-chain amino acid transporter membrane protein 1597315 2663431 BB1492 Bordetella bronchiseptica RB50 high-affinity branched-chain amino acid transporter membrane protein NP_888037.1 1596452 R 257310 CDS NP_888038.1 33600478 2663875 complement(1597343..1598551) 1 NC_002927.3 branched chain amino-acid ABC transporter substrate-binding protein 1598551 2663875 BB1493 Bordetella bronchiseptica RB50 branched chain amino-acid ABC transporter substrate-binding protein NP_888038.1 1597343 R 257310 CDS NP_888039.1 33600479 2663611 1598775..1600154 1 NC_002927.3 hypothetical protein 1600154 2663611 BB1494 Bordetella bronchiseptica RB50 hypothetical protein NP_888039.1 1598775 D 257310 CDS NP_888040.1 33600480 2663467 1600151..1600936 1 NC_002927.3 transcriptional regulator 1600936 2663467 BB1495 Bordetella bronchiseptica RB50 transcriptional regulator NP_888040.1 1600151 D 257310 CDS NP_888041.1 33600481 2663652 1601068..1601817 1 NC_002927.3 short chain dehydrogenase 1601817 2663652 BB1496 Bordetella bronchiseptica RB50 short chain dehydrogenase NP_888041.1 1601068 D 257310 CDS NP_888042.1 33600482 2663544 1601884..1602858 1 NC_002927.3 hypothetical protein 1602858 2663544 BB1497 Bordetella bronchiseptica RB50 hypothetical protein NP_888042.1 1601884 D 257310 CDS NP_888043.1 33600483 2662689 1602910..1603758 1 NC_002927.3 hydrolase 1603758 2662689 BB1498 Bordetella bronchiseptica RB50 hydrolase NP_888043.1 1602910 D 257310 CDS NP_888044.1 33600484 2663378 1603775..1605289 1 NC_002927.3 monoxygenase 1605289 2663378 BB1499 Bordetella bronchiseptica RB50 monoxygenase NP_888044.1 1603775 D 257310 CDS NP_888045.1 33600485 2663642 1605286..1606194 1 NC_002927.3 3-hydroxybutyryl-CoA dehydrogenase 1606194 2663642 BB1500 Bordetella bronchiseptica RB50 3-hydroxybutyryl-CoA dehydrogenase NP_888045.1 1605286 D 257310 CDS NP_888046.1 33600486 2662765 1606631..1607398 1 NC_002927.3 enoyl-CoA hydratase 1607398 2662765 BB1501 Bordetella bronchiseptica RB50 enoyl-CoA hydratase NP_888046.1 1606631 D 257310 CDS NP_888047.1 33600487 2663618 1607436..1608638 1 NC_002927.3 L-carnitine dehydrogenase 1608638 2663618 BB1502 Bordetella bronchiseptica RB50 L-carnitine dehydrogenase NP_888047.1 1607436 D 257310 CDS NP_888048.1 33600488 2662752 1608725..1609963 1 NC_002927.3 ABC transporter substrate-binding protein 1609963 2662752 BB1503 Bordetella bronchiseptica RB50 ABC transporter substrate-binding protein NP_888048.1 1608725 D 257310 CDS NP_888049.1 33600489 2662747 1610001..1610876 1 NC_002927.3 ABC transporter permease 1610876 2662747 BB1504 Bordetella bronchiseptica RB50 ABC transporter permease NP_888049.1 1610001 D 257310 CDS NP_888050.1 33600490 2663044 1610877..1611776 1 NC_002927.3 ABC transporter permease 1611776 2663044 BB1505 Bordetella bronchiseptica RB50 ABC transporter permease NP_888050.1 1610877 D 257310 CDS NP_888051.1 33600491 2663572 1611779..1612540 1 NC_002927.3 ABC transporter ATP-binding protein 1612540 2663572 BB1506 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_888051.1 1611779 D 257310 CDS NP_888052.1 33600492 2662691 1612537..1613262 1 NC_002927.3 ABC transporter ATP-binding protein 1613262 2662691 BB1507 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_888052.1 1612537 D 257310 CDS NP_888053.1 33600493 2662907 1613259..1614641 1 NC_002927.3 amidase 1614641 2662907 BB1508 Bordetella bronchiseptica RB50 amidase NP_888053.1 1613259 D 257310 CDS NP_888054.1 33600494 2663651 1614721..1616115 1 NC_002927.3 hypothetical protein 1616115 2663651 BB1509 Bordetella bronchiseptica RB50 hypothetical protein NP_888054.1 1614721 D 257310 CDS NP_888055.1 33600495 2662915 1616180..1616893 1 NC_002927.3 GntR family transcriptional regulator 1616893 2662915 BB1510 Bordetella bronchiseptica RB50 GntR family transcriptional regulator NP_888055.1 1616180 D 257310 CDS NP_888056.1 33600496 2663281 complement(1616937..1617245) 1 NC_002927.3 hypothetical protein 1617245 2663281 BB1511 Bordetella bronchiseptica RB50 hypothetical protein NP_888056.1 1616937 R 257310 CDS NP_888057.1 33600497 2663620 complement(1617265..1618044) 1 NC_002927.3 Similar to Gluconobacter oxydans gluconate 5-dehydrogenase Gno SWALL:GNO_GLUOX (SWALL:P50199) (256 aa) fasta scores: E(): 3.4e-28, 38.61% id in 259 aa, and to Ralstonia solanacearum probable gluconate 5-dehydrogenase oxidoreductase IdnO or rsp0947 or rs05386 SWALL:Q8XRB1 (EMBL:AL646081) (258 aa) fasta scores: E(): 1.1e-30, 39.6% id in 250 aa; short chain dehydrogenase 1618044 2663620 BB1512 Bordetella bronchiseptica RB50 short chain dehydrogenase NP_888057.1 1617265 R 257310 CDS NP_888058.1 33600498 2663474 complement(1618064..1618846) 1 NC_002927.3 Similar to Acinetobacter sp. ADP1 DcaC SWALL:Q937T4 (EMBL:L05770) (253 aa) fasta scores: E(): 5.4e-33, 43.37% id in 249 aa, and to Rhizobium loti probable short chain dehydrogenase mll1036 SWALL:Q98LG1 (EMBL:AP002996) (268 aa) fasta scores: E(): 2.8e-39, 47.01% id in 251 aa; short chain dehydrogenase 1618846 2663474 BB1513 Bordetella bronchiseptica RB50 short chain dehydrogenase NP_888058.1 1618064 R 257310 CDS NP_888059.1 33600499 2662840 complement(1618881..1620161) 1 NC_002927.3 ABC transporter 1620161 2662840 BB1514 Bordetella bronchiseptica RB50 ABC transporter NP_888059.1 1618881 R 257310 CDS NP_888060.1 33600500 2663446 complement(1620161..1620673) 1 NC_002927.3 ABC transporter 1620673 2663446 BB1515 Bordetella bronchiseptica RB50 ABC transporter NP_888060.1 1620161 R 257310 CDS NP_888061.1 33600501 2663254 complement(1620752..1621813) 1 NC_002927.3 ABC transporter substrate-binding protein 1621813 2663254 BB1516 Bordetella bronchiseptica RB50 ABC transporter substrate-binding protein NP_888061.1 1620752 R 257310 CDS NP_888062.1 33600502 2663277 complement(1621810..1622205) 1 NC_002927.3 hypothetical protein 1622205 2663277 BB1517 Bordetella bronchiseptica RB50 hypothetical protein NP_888062.1 1621810 R 257310 CDS NP_888063.1 33600503 2663661 complement(1622246..1623160) 1 NC_002927.3 hydrolase 1623160 2663661 BB1518 Bordetella bronchiseptica RB50 hydrolase NP_888063.1 1622246 R 257310 CDS NP_888064.1 33600504 2663117 complement(1623207..1623878) 1 NC_002927.3 GntR family transcriptional regulator 1623878 2663117 BB1519 Bordetella bronchiseptica RB50 GntR family transcriptional regulator NP_888064.1 1623207 R 257310 CDS NP_888065.1 33600505 2663234 complement(1624028..1624519) 1 NC_002927.3 AsnC family transcriptional regulator 1624519 2663234 BB1520 Bordetella bronchiseptica RB50 AsnC family transcriptional regulator NP_888065.1 1624028 R 257310 CDS NP_888066.1 33600506 2662971 complement(1624754..1625956) 1 NC_002927.3 catalyzes the formation of pyruvate from 2,3-diaminopropionate; diaminopropionate ammonia-lyase 1625956 2662971 BB1521 Bordetella bronchiseptica RB50 diaminopropionate ammonia-lyase NP_888066.1 1624754 R 257310 CDS NP_888067.1 33600507 2663100 1626329..1627513 1 NC_002927.3 peptidase 1627513 2663100 BB1522 Bordetella bronchiseptica RB50 peptidase NP_888067.1 1626329 D 257310 CDS NP_888068.1 33600508 2663142 1627510..1628520 1 NC_002927.3 ABC transporter substrate-binding protein 1628520 2663142 BB1523 Bordetella bronchiseptica RB50 ABC transporter substrate-binding protein NP_888068.1 1627510 D 257310 CDS NP_888069.1 33600509 2663265 1628651..1629862 1 NC_002927.3 ABC transporter 1629862 2663265 BB1524 Bordetella bronchiseptica RB50 ABC transporter NP_888069.1 1628651 D 257310 CDS NP_888070.1 33600510 2663543 1629875..1631029 1 NC_002927.3 ABC transporter 1631029 2663543 BB1525 Bordetella bronchiseptica RB50 ABC transporter NP_888070.1 1629875 D 257310 CDS NP_888071.1 33600511 2663267 1631035..1631823 1 NC_002927.3 ABC transporter ATP-binding protein 1631823 2663267 BB1526 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_888071.1 1631035 D 257310 CDS NP_888072.1 33600512 2662832 1631908..1632252 1 NC_002927.3 hypothetical protein 1632252 2662832 BB1527 Bordetella bronchiseptica RB50 hypothetical protein NP_888072.1 1631908 D 257310 CDS NP_888073.1 33600513 2663250 complement(1632272..1633495) 1 NC_002927.3 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 1633495 2663250 BB1528 Bordetella bronchiseptica RB50 aspartate aminotransferase NP_888073.1 1632272 R 257310 CDS NP_888074.1 33600514 2663402 complement(1633517..1634509) 1 NC_002927.3 dehydrogenase 1634509 2663402 BB1529 Bordetella bronchiseptica RB50 dehydrogenase NP_888074.1 1633517 R 257310 CDS NP_888075.1 33600515 2663106 complement(1634506..1635780) 1 NC_002927.3 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase 1635780 2663106 BB1530 Bordetella bronchiseptica RB50 allantoate amidohydrolase NP_888075.1 1634506 R 257310 CDS NP_888076.1 33600516 2662940 complement(1635785..1636582) 1 NC_002927.3 decarboxylase 1636582 2662940 BB1531 Bordetella bronchiseptica RB50 decarboxylase NP_888076.1 1635785 R 257310 CDS NP_888077.1 33600517 2663853 complement(1636582..1637376) 1 NC_002927.3 aldolase 1637376 2663853 BB1532 Bordetella bronchiseptica RB50 aldolase NP_888077.1 1636582 R 257310 CDS NP_888078.1 33600518 2663787 complement(1637373..1638167) 1 NC_002927.3 creatinine amidohydrolase 1638167 2663787 BB1533 Bordetella bronchiseptica RB50 creatinine amidohydrolase NP_888078.1 1637373 R 257310 CDS NP_888079.1 33600519 2663801 complement(1638206..1639174) 1 NC_002927.3 hypothetical protein 1639174 2663801 BB1534 Bordetella bronchiseptica RB50 hypothetical protein NP_888079.1 1638206 R 257310 CDS NP_888080.1 33600520 2663788 complement(1639171..1640130) 1 NC_002927.3 hypothetical protein 1640130 2663788 BB1535 Bordetella bronchiseptica RB50 hypothetical protein NP_888080.1 1639171 R 257310 CDS NP_888081.1 33600521 2663752 1640337..1641236 1 NC_002927.3 LysR family transcriptional regulator 1641236 2663752 BB1536 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_888081.1 1640337 D 257310 CDS NP_888082.1 33600522 2662761 1641328..1641903 1 NC_002927.3 hypothetical protein 1641903 2662761 BB1537 Bordetella bronchiseptica RB50 hypothetical protein NP_888082.1 1641328 D 257310 CDS NP_888083.1 33600523 2663698 1642125..1643840 1 NC_002927.3 hypothetical protein 1643840 2663698 BB1538 Bordetella bronchiseptica RB50 hypothetical protein NP_888083.1 1642125 D 257310 CDS NP_888084.1 33600524 2663523 complement(1643837..1644727) 1 NC_002927.3 LysR family transcriptional regulator 1644727 2663523 BB1539 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_888084.1 1643837 R 257310 CDS NP_888085.1 33600525 2663498 1644835..1645425 1 NC_002927.3 hypothetical protein 1645425 2663498 BB1540 Bordetella bronchiseptica RB50 hypothetical protein NP_888085.1 1644835 D 257310 CDS NP_888086.1 33600526 2663553 1645427..1647028 1 NC_002927.3 transferase 1647028 2663553 BB1541 Bordetella bronchiseptica RB50 transferase NP_888086.1 1645427 D 257310 CDS NP_888087.1 33600527 2663723 1647059..1648285 1 NC_002927.3 cystathionase beta-lyase 1648285 metC 2663723 metC Bordetella bronchiseptica RB50 cystathionase beta-lyase NP_888087.1 1647059 D 257310 CDS NP_888088.1 33600528 2663018 1648282..1649313 1 NC_002927.3 hypothetical protein 1649313 2663018 BB1543 Bordetella bronchiseptica RB50 hypothetical protein NP_888088.1 1648282 D 257310 CDS NP_888089.1 33600529 2663846 1649368..1650360 1 NC_002927.3 hypothetical protein 1650360 2663846 BB1544 Bordetella bronchiseptica RB50 hypothetical protein NP_888089.1 1649368 D 257310 CDS NP_888090.1 33600530 2663099 1650421..1652760 1 NC_002927.3 biotin sulfoxide reductase 1652760 bisC 2663099 bisC Bordetella bronchiseptica RB50 biotin sulfoxide reductase NP_888090.1 1650421 D 257310 CDS NP_888091.1 33600531 2663753 complement(1652773..1653603) 1 NC_002927.3 hypothetical protein 1653603 2663753 BB1546 Bordetella bronchiseptica RB50 hypothetical protein NP_888091.1 1652773 R 257310 CDS NP_888092.1 33600532 2663591 complement(1653617..1654369) 1 NC_002927.3 amino acid ABC transporter ATP-binding protein 1654369 2663591 BB1547 Bordetella bronchiseptica RB50 amino acid ABC transporter ATP-binding protein NP_888092.1 1653617 R 257310 CDS NP_888093.1 33600533 2663706 complement(1654362..1655165) 1 NC_002927.3 amino acid ABC transporter ATP-binding protein 1655165 2663706 BB1548 Bordetella bronchiseptica RB50 amino acid ABC transporter ATP-binding protein NP_888093.1 1654362 R 257310 CDS NP_888094.1 33600534 2663056 complement(1655162..1656166) 1 NC_002927.3 amino acid ABC transporter 1656166 2663056 BB1549 Bordetella bronchiseptica RB50 amino acid ABC transporter NP_888094.1 1655162 R 257310 CDS NP_888095.1 33600535 2663017 complement(1656163..1657035) 1 NC_002927.3 amino acid ABC transporter 1657035 2663017 BB1550 Bordetella bronchiseptica RB50 amino acid ABC transporter NP_888095.1 1656163 R 257310 CDS NP_888096.1 33600536 2663514 complement(1657100..1658239) 1 NC_002927.3 amino acid ABC transporter substrate-binding protein 1658239 2663514 BB1551 Bordetella bronchiseptica RB50 amino acid ABC transporter substrate-binding protein NP_888096.1 1657100 R 257310 CDS NP_888097.1 33600537 2662726 complement(1658393..1658713) 1 NC_002927.3 hypothetical protein 1658713 2662726 BB1552 Bordetella bronchiseptica RB50 hypothetical protein NP_888097.1 1658393 R 257310 CDS NP_888098.1 33600538 2663020 1659004..1659207 1 NC_002927.3 hypothetical protein 1659207 2663020 BB1553 Bordetella bronchiseptica RB50 hypothetical protein NP_888098.1 1659004 D 257310 CDS NP_888099.1 33600539 2663055 1659328..1660629 1 NC_002927.3 UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1660629 2663055 BB1554 Bordetella bronchiseptica RB50 UDP-N-acetylglucosamine 1-carboxyvinyltransferase NP_888099.1 1659328 D 257310 CDS NP_888100.1 33600540 2663098 complement(1660834..1661376) 1 NC_002927.3 hypothetical protein 1661376 2663098 BB1555 Bordetella bronchiseptica RB50 hypothetical protein NP_888100.1 1660834 R 257310 CDS NP_888101.1 33600541 2663049 complement(1661421..1663271) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0872; ABC transporter ATP-binding protein 1663271 2663049 BB1556 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_888101.1 1661421 R 257310 CDS NP_888102.1 33600542 2663707 1663652..1664311 1 NC_002927.3 catalyzes the S-adenosylmethionine-dependent transmethylation of thiopurine compounds; may be involved in selenium cycling by forming dimethylselenide and/or dimethyldiselenide; thiopurine S-methyltransferase 1664311 tpm 2663707 tpm Bordetella bronchiseptica RB50 thiopurine S-methyltransferase NP_888102.1 1663652 D 257310 CDS NP_888103.1 33600543 2663026 1664399..1664551 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0874; vir-repressed protein 1664551 vir-18 2663026 vir-18 Bordetella bronchiseptica RB50 vir-repressed protein NP_888103.1 1664399 D 257310 CDS NP_888104.1 33600544 2663731 1664660..1664827 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0875; hypothetical protein 1664827 2663731 BB1559 Bordetella bronchiseptica RB50 hypothetical protein NP_888104.1 1664660 D 257310 CDS NP_888105.1 33600545 2663746 complement(1664839..1665519) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0876; lipoprotein 1665519 2663746 BB1560 Bordetella bronchiseptica RB50 lipoprotein NP_888105.1 1664839 R 257310 CDS NP_888106.1 33600546 2663780 1665801..1666517 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0877; hypothetical protein 1666517 2663780 BB1561 Bordetella bronchiseptica RB50 hypothetical protein NP_888106.1 1665801 D 257310 CDS NP_888107.1 33600547 2663797 complement(1666533..1667834) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0878; phospholipase 1667834 2663797 BB1562 Bordetella bronchiseptica RB50 phospholipase NP_888107.1 1666533 R 257310 CDS NP_888108.1 33600548 2663814 complement(1667969..1669471) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0879; aldehyde dehydrogenase 1669471 2663814 BB1563 Bordetella bronchiseptica RB50 aldehyde dehydrogenase NP_888108.1 1667969 R 257310 CDS NP_888109.1 33600549 2663037 1669991..1672879 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0880; hypothetical protein 1672879 2663037 BB1564 Bordetella bronchiseptica RB50 hypothetical protein NP_888109.1 1669991 D 257310 CDS NP_888110.1 33600550 2663510 1673103..1674455 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0882; hypothetical protein 1674455 2663510 BB1565 Bordetella bronchiseptica RB50 hypothetical protein NP_888110.1 1673103 D 257310 CDS NP_888111.1 33600551 2663506 1674484..1675008 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0883; biotin carboxyl carrier protein 1675008 2663506 BB1566 Bordetella bronchiseptica RB50 biotin carboxyl carrier protein NP_888111.1 1674484 D 257310 CDS NP_888112.1 33600552 2663551 1675005..1676459 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0884; carboxylase 1676459 2663551 BB1567 Bordetella bronchiseptica RB50 carboxylase NP_888112.1 1675005 D 257310 CDS NP_888113.1 33600553 2663718 1676494..1676802 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0885; hypothetical protein 1676802 2663718 BB1568 Bordetella bronchiseptica RB50 hypothetical protein NP_888113.1 1676494 D 257310 CDS NP_888114.1 33600554 2663725 1676848..1677723 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0886; hypothetical protein 1677723 2663725 BB1569 Bordetella bronchiseptica RB50 hypothetical protein NP_888114.1 1676848 D 257310 CDS NP_888115.1 33600555 2663726 1677749..1678804 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0887; hypothetical protein 1678804 2663726 BB1570 Bordetella bronchiseptica RB50 hypothetical protein NP_888115.1 1677749 D 257310 CDS NP_888116.1 33600556 2663745 1678817..1679608 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0888; GntR family transcriptional regulator 1679608 2663745 BB1571 Bordetella bronchiseptica RB50 GntR family transcriptional regulator NP_888116.1 1678817 D 257310 CDS NP_888117.1 33600557 2663387 1679641..1681011 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0889; biotin carboxylase 1681011 accC 2663387 accC Bordetella bronchiseptica RB50 biotin carboxylase NP_888117.1 1679641 D 257310 CDS NP_888118.1 33600558 2663576 1681027..1682562 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0890; acyl-CoA carboxylase 1682562 2663576 BB1573 Bordetella bronchiseptica RB50 acyl-CoA carboxylase NP_888118.1 1681027 D 257310 CDS NP_888119.1 33600559 2663792 1682608..1682829 1 NC_002927.3 biotinylated protein 1682829 2663792 BB1574 Bordetella bronchiseptica RB50 biotinylated protein NP_888119.1 1682608 D 257310 CDS NP_888120.1 33600560 2663705 1682826..1683551 1 NC_002927.3 acetyl-CoA synthetase 1683551 2663705 BB1575 Bordetella bronchiseptica RB50 acetyl-CoA synthetase NP_888120.1 1682826 D 257310 CDS NP_888121.1 33600561 2663036 1683559..1685055 1 NC_002927.3 hypothetical protein 1685055 2663036 BB1576 Bordetella bronchiseptica RB50 hypothetical protein NP_888121.1 1683559 D 257310 CDS NP_888122.1 33600562 2663012 1685094..1686101 1 NC_002927.3 substrate-binding protein 1686101 2663012 BB1577 Bordetella bronchiseptica RB50 substrate-binding protein NP_888122.1 1685094 D 257310 CDS NP_888123.1 33600563 2663813 1686204..1686761 1 NC_002927.3 hypothetical protein 1686761 2663813 BB1578 Bordetella bronchiseptica RB50 hypothetical protein NP_888123.1 1686204 D 257310 CDS NP_888124.1 33600564 2663759 1686779..1688065 1 NC_002927.3 hypothetical protein 1688065 2663759 BB1579 Bordetella bronchiseptica RB50 hypothetical protein NP_888124.1 1686779 D 257310 CDS NP_888125.1 33600565 2663034 1688078..1689316 1 NC_002927.3 hypothetical protein 1689316 2663034 BB1580 Bordetella bronchiseptica RB50 hypothetical protein NP_888125.1 1688078 D 257310 CDS NP_888126.1 33600566 2663065 1689417..1690649 1 NC_002927.3 reductase 1690649 2663065 BB1581 Bordetella bronchiseptica RB50 reductase NP_888126.1 1689417 D 257310 CDS NP_888127.1 33600567 2663793 1690748..1691158 1 NC_002927.3 hypothetical protein 1691158 2663793 BB1582 Bordetella bronchiseptica RB50 hypothetical protein NP_888127.1 1690748 D 257310 CDS NP_888128.1 33600568 2663708 1691185..1691994 1 NC_002927.3 decarboxylase 1691994 2663708 BB1583 Bordetella bronchiseptica RB50 decarboxylase NP_888128.1 1691185 D 257310 CDS NP_888129.1 33600569 2663013 1692177..1693121 1 NC_002927.3 LysR family transcriptional regulator 1693121 2663013 BB1584 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_888129.1 1692177 D 257310 CDS NP_888130.1 33600570 2662462 complement(1693118..1694017) 1 NC_002927.3 hypothetical protein 1694017 2662462 BB1585 Bordetella bronchiseptica RB50 hypothetical protein NP_888130.1 1693118 R 257310 CDS NP_888131.1 33600571 2659882 1694202..1694525 1 NC_002927.3 ferredoxin 1694525 ndoA 2659882 ndoA Bordetella bronchiseptica RB50 ferredoxin NP_888131.1 1694202 D 257310 CDS NP_888132.1 33600572 2661331 1694647..1695510 1 NC_002927.3 oxygenase 1695510 2661331 BB1587 Bordetella bronchiseptica RB50 oxygenase NP_888132.1 1694647 D 257310 CDS NP_888133.1 33600573 2661540 1695522..1696520 1 NC_002927.3 cyclodeaminase 1696520 2661540 BB1588 Bordetella bronchiseptica RB50 cyclodeaminase NP_888133.1 1695522 D 257310 CDS NP_888134.1 33600574 2659311 1696548..1697666 1 NC_002927.3 dioxygenase 1697666 2659311 BB1589 Bordetella bronchiseptica RB50 dioxygenase NP_888134.1 1696548 D 257310 CDS NP_888135.1 33600575 2662055 1697695..1698192 1 NC_002927.3 dioxygenase small subunit 1698192 2662055 BB1590 Bordetella bronchiseptica RB50 dioxygenase small subunit NP_888135.1 1697695 D 257310 CDS NP_888136.1 33600576 2659016 1698208..1699449 1 NC_002927.3 oxygenase (large subunit) 1699449 2659016 BB1591 Bordetella bronchiseptica RB50 oxygenase (large subunit) NP_888136.1 1698208 D 257310 CDS NP_888137.1 33600577 2658977 1699524..1700744 1 NC_002927.3 ABC transporter substrate-binding protein 1700744 2658977 BB1592 Bordetella bronchiseptica RB50 ABC transporter substrate-binding protein NP_888137.1 1699524 D 257310 CDS NP_888138.1 33600578 2660116 1700812..1701675 1 NC_002927.3 ABC transporter 1701675 2660116 BB1593 Bordetella bronchiseptica RB50 ABC transporter NP_888138.1 1700812 D 257310 CDS NP_888139.1 33600579 2660259 1701678..1702679 1 NC_002927.3 ABC transporter 1702679 2660259 BB1594 Bordetella bronchiseptica RB50 ABC transporter NP_888139.1 1701678 D 257310 CDS NP_888140.1 33600580 2661673 1702676..1703419 1 NC_002927.3 ABC transporter ATP-binding protein 1703419 2661673 BB1595 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_888140.1 1702676 D 257310 CDS NP_888141.1 33600581 2661790 1703419..1704114 1 NC_002927.3 ABC transporter ATP-binding protein 1704114 2661790 BB1596 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_888141.1 1703419 D 257310 CDS NP_888142.1 33600582 2661159 1704123..1704866 1 NC_002927.3 oxidoreductase 1704866 2661159 BB1597 Bordetella bronchiseptica RB50 oxidoreductase NP_888142.1 1704123 D 257310 CDS NP_888143.1 33600583 2662563 complement(1704902..1706497) 1 NC_002927.3 glutamyltransferase 1706497 2662563 BB1598 Bordetella bronchiseptica RB50 glutamyltransferase NP_888143.1 1704902 R 257310 CDS NP_888144.1 33600584 2662502 complement(1706520..1707491) 1 NC_002927.3 hypothetical protein 1707491 2662502 BB1599 Bordetella bronchiseptica RB50 hypothetical protein NP_888144.1 1706520 R 257310 CDS NP_888145.1 33600585 2662425 1707679..1708335 1 NC_002927.3 GntR family transcriptional regulator 1708335 2662425 BB1600 Bordetella bronchiseptica RB50 GntR family transcriptional regulator NP_888145.1 1707679 D 257310 CDS NP_888146.1 33600586 2659127 1708451..1709728 1 NC_002927.3 hypothetical protein 1709728 2659127 BB1601 Bordetella bronchiseptica RB50 hypothetical protein NP_888146.1 1708451 D 257310 CDS NP_888147.1 33600587 2662506 complement(1709730..1710293) 1 NC_002927.3 hypothetical protein 1710293 2662506 BB1602 Bordetella bronchiseptica RB50 hypothetical protein NP_888147.1 1709730 R 257310 CDS NP_888148.1 33600588 2662588 complement(1710290..1710871) 1 NC_002927.3 hypothetical protein 1710871 2662588 BB1603 Bordetella bronchiseptica RB50 hypothetical protein NP_888148.1 1710290 R 257310 CDS NP_888149.1 33600589 2662590 complement(1710868..1711458) 1 NC_002927.3 hypothetical protein 1711458 2662590 BB1604 Bordetella bronchiseptica RB50 hypothetical protein NP_888149.1 1710868 R 257310 CDS NP_888150.1 33600590 2662482 complement(1711631..1713004) 1 NC_002927.3 hypothetical protein 1713004 2662482 BB1605 Bordetella bronchiseptica RB50 hypothetical protein NP_888150.1 1711631 R 257310 CDS NP_888151.1 33600591 2662533 complement(1713075..1714139) 1 NC_002927.3 oxidoreductase 1714139 2662533 BB1606 Bordetella bronchiseptica RB50 oxidoreductase NP_888151.1 1713075 R 257310 CDS NP_888152.1 33600592 2659055 1714239..1715165 1 NC_002927.3 LysR family transcriptional regulator 1715165 2659055 BB1607 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_888152.1 1714239 D 257310 CDS NP_888153.1 33600593 2662283 1715407..1715862 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2265; hypothetical protein 1715862 2662283 BB1608 Bordetella bronchiseptica RB50 hypothetical protein NP_888153.1 1715407 D 257310 CDS NP_888154.1 33600594 2663945 complement(1715899..1716165) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2264; type III secretion protein 1716165 bscF 2663945 bscF Bordetella bronchiseptica RB50 type III secretion protein NP_888154.1 1715899 R 257310 CDS NP_888155.1 33600595 2661889 complement(1716155..1716454) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2263; hypothetical protein 1716454 bscE 2661889 bscE Bordetella bronchiseptica RB50 hypothetical protein NP_888155.1 1716155 R 257310 CDS NP_888156.1 33600596 2661903 complement(1716495..1717775) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2262; type III secretion protein 1717775 bscD 2661903 bscD Bordetella bronchiseptica RB50 type III secretion protein NP_888156.1 1716495 R 257310 CDS NP_888157.1 33600597 2660167 complement(1717772..1719871) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2261; type III secretion pore protein 1719871 bcrD 2660167 bcrD Bordetella bronchiseptica RB50 type III secretion pore protein NP_888157.1 1717772 R 257310 CDS NP_888158.1 33600598 2659207 complement(1719868..1720236) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2260; hypothetical protein 1720236 2659207 BB1613 Bordetella bronchiseptica RB50 hypothetical protein NP_888158.1 1719868 R 257310 CDS NP_888159.1 33600599 2660263 complement(1720233..1720643) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2259; hypothetical protein 1720643 2660263 BB1614 Bordetella bronchiseptica RB50 hypothetical protein NP_888159.1 1720233 R 257310 CDS NP_888160.1 33600600 2662200 complement(1720648..1721025) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2258; hypothetical protein 1721025 2662200 BB1615 Bordetella bronchiseptica RB50 hypothetical protein NP_888160.1 1720648 R 257310 CDS NP_888161.1 33600601 2661677 complement(1721022..1722119) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2257; outer protein N 1722119 bopN 2661677 bopN Bordetella bronchiseptica RB50 outer protein N NP_888161.1 1721022 R 257310 CDS NP_888162.1 33600602 2660218 1722283..1722900 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2256; secreted protein 1722900 bsp22 2660218 bsp22 Bordetella bronchiseptica RB50 secreted protein NP_888162.1 1722283 D 257310 CDS NP_888163.1 33600603 2661758 1722923..1723198 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2255; hypothetical protein 1723198 2661758 BB1618 Bordetella bronchiseptica RB50 hypothetical protein NP_888163.1 1722923 D 257310 CDS NP_888164.1 33600604 2661789 1723214..1723699 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2254; regulatory protein 1723699 bcrH1 2661789 bcrH1 Bordetella bronchiseptica RB50 regulatory protein NP_888164.1 1723214 D 257310 CDS NP_888165.1 33600605 2659170 1723747..1724688 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2253; outer protein D 1724688 bopD 2659170 bopD Bordetella bronchiseptica RB50 outer protein D NP_888165.1 1723747 D 257310 CDS NP_888166.1 33600606 2660119 1724718..1725920 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2252; outer protein B 1725920 bopB 2660119 bopB Bordetella bronchiseptica RB50 outer protein B NP_888166.1 1724718 D 257310 CDS NP_888167.1 33600607 2659350 1725944..1726405 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2251; regulatory protein 1726405 bcrH2 2659350 bcrH2 Bordetella bronchiseptica RB50 regulatory protein NP_888167.1 1725944 D 257310 CDS NP_888168.1 33600608 2660600 1726410..1726931 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2250; hypothetical protein 1726931 bcr4 2660600 bcr4 Bordetella bronchiseptica RB50 hypothetical protein NP_888168.1 1726410 D 257310 CDS NP_888169.1 33600609 2660534 1726928..1727356 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2249; type III secretion protein 1727356 bscI 2660534 bscI Bordetella bronchiseptica RB50 type III secretion protein NP_888169.1 1726928 D 257310 CDS NP_888170.1 33600610 2660407 1727353..1728177 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2248; type III secretion protein 1728177 bscJ 2660407 bscJ Bordetella bronchiseptica RB50 type III secretion protein NP_888170.1 1727353 D 257310 CDS NP_888171.1 33600611 2661230 1728170..1728832 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2247; hypothetical protein 1728832 bscK 2661230 bscK Bordetella bronchiseptica RB50 hypothetical protein NP_888171.1 1728170 D 257310 CDS NP_888172.1 33600612 2659498 1728877..1729440 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2246; type III secretion system protein 1729440 bscL 2659498 bscL Bordetella bronchiseptica RB50 type III secretion system protein NP_888172.1 1728877 D 257310 CDS NP_888173.1 33600613 2662485 1729445..1730779 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2245; type III secretion system ATPase 1730779 bscN 2662485 bscN Bordetella bronchiseptica RB50 type III secretion system ATPase NP_888173.1 1729445 D 257310 CDS NP_888174.1 33600614 2659846 1730779..1731288 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2244; type III secretion protein 1731288 bscO 2659846 bscO Bordetella bronchiseptica RB50 type III secretion protein NP_888174.1 1730779 D 257310 CDS NP_888175.1 33600615 2659853 1731285..1731833 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2243; hypothetical protein 1731833 bscP 2659853 bscP Bordetella bronchiseptica RB50 hypothetical protein NP_888175.1 1731285 D 257310 CDS NP_888176.1 33600616 2659861 1731830..1732909 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2241; type III secretion protein 1732909 bscQ 2659861 bscQ Bordetella bronchiseptica RB50 type III secretion protein NP_888176.1 1731830 D 257310 CDS NP_888177.1 33600617 2661312 1732906..1733577 1 NC_002927.3 part of a set of proteins involved in the infection of eukaryotic cells; in plant pathogens involved in the hypersensitivity response; type III secretion system protein 1733577 bscR 2661312 bscR Bordetella bronchiseptica RB50 type III secretion system protein NP_888177.1 1732906 D 257310 CDS NP_888178.1 33600618 2661604 1733574..1733849 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2239; type III secretion protein 1733849 bscS 2661604 bscS Bordetella bronchiseptica RB50 type III secretion protein NP_888178.1 1733574 D 257310 CDS NP_888179.1 33600619 2659871 1733861..1734661 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2238; type III secretion protein 1734661 bscT 2659871 bscT Bordetella bronchiseptica RB50 type III secretion protein NP_888179.1 1733861 D 257310 CDS NP_888180.1 33600620 2661171 1734658..1735707 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2237; type III secretion protein 1735707 bscU 2661171 bscU Bordetella bronchiseptica RB50 type III secretion protein NP_888180.1 1734658 D 257310 CDS NP_888181.1 33600621 2659779 1735704..1736102 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2236; hypothetical protein 1736102 bscW 2659779 bscW Bordetella bronchiseptica RB50 hypothetical protein NP_888181.1 1735704 D 257310 CDS NP_888182.1 33600622 2662270 1736093..1737895 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2235; type III secretion protein 1737895 bscC 2662270 bscC Bordetella bronchiseptica RB50 type III secretion protein NP_888182.1 1736093 D 257310 CDS NP_888183.1 33600623 2661921 complement(1737917..1738519) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2234; RNA polymerase sigma factor 1738519 btrS 2661921 btrS Bordetella bronchiseptica RB50 RNA polymerase sigma factor NP_888183.1 1737917 R 257310 CDS NP_888184.1 33600624 2659248 complement(1738694..1739374) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2233; hypothetical protein 1739374 2659248 BB1639 Bordetella bronchiseptica RB50 hypothetical protein NP_888184.1 1738694 R 257310 CDS NP_888185.1 33600625 2662579 1739436..1740920 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2232; hypothetical protein 1740920 2662579 BB1640 Bordetella bronchiseptica RB50 hypothetical protein NP_888185.1 1739436 D 257310 CDS NP_888186.1 33600626 2662073 complement(1740962..1742149) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2231; hypothetical protein 1742149 2662073 BB1641 Bordetella bronchiseptica RB50 hypothetical protein NP_888186.1 1740962 R 257310 CDS NP_888187.1 33600627 2662560 complement(1742146..1744167) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2230; regulator 1744167 btrU 2662560 btrU Bordetella bronchiseptica RB50 regulator NP_888187.1 1742146 R 257310 CDS NP_888188.1 33600628 2662531 1744252..1746699 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2229; inner membrane transport protein 1746699 2662531 BB1643 Bordetella bronchiseptica RB50 inner membrane transport protein NP_888188.1 1744252 D 257310 CDS NP_888189.1 33600629 2661802 complement(1746696..1747859) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2228; alanine racemase, catabolic 1747859 alr 2661802 alr Bordetella bronchiseptica RB50 alanine racemase, catabolic NP_888189.1 1746696 R 257310 CDS NP_888190.1 33600630 2661695 complement(1747943..1748371) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2227; anti-sigma factor 1748371 btrW 2661695 btrW Bordetella bronchiseptica RB50 anti-sigma factor NP_888190.1 1747943 R 257310 CDS NP_888191.1 33600631 2661684 1748515..1748865 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2226; anti-sigma factor antagonist 1748865 btrV 2661684 btrV Bordetella bronchiseptica RB50 anti-sigma factor antagonist NP_888191.1 1748515 D 257310 CDS NP_888192.1 33600632 2659360 complement(1748862..1750406) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2225; phospholipase 1750406 2659360 BB1647 Bordetella bronchiseptica RB50 phospholipase NP_888192.1 1748862 R 257310 CDS NP_888193.1 33600633 2661778 complement(1750724..1751191) 1 NC_002927.3 Similar to Salmonella typhi acetyltransferase YjaB or sty4399 SWALL:Q8Z1W2 (EMBL:AL627282) (145 aa) fasta scores: E(): 1.3e-30, 56.73% id in 141 aa, and to Escherichia coli hypothetical acetyltransferase YjaB or b4012 SWALL:YJAB_ECOLI (SWALL:P09163) (147 aa) fasta scores: E(): 6.1e-29, 54.67% id in 139 aa; hypothetical protein 1751191 2661778 BB1648 Bordetella bronchiseptica RB50 hypothetical protein NP_888193.1 1750724 R 257310 CDS NP_888194.1 33600634 2661757 1751345..1754056 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2224; autotransporter 1754056 bapA 2661757 bapA Bordetella bronchiseptica RB50 autotransporter NP_888194.1 1751345 D 257310 CDS NP_888195.1 33600635 2661733 1754319..1754591 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2222; hypothetical protein 1754591 2661733 BB1650 Bordetella bronchiseptica RB50 hypothetical protein NP_888195.1 1754319 D 257310 CDS NP_888196.1 33600636 2660155 complement(1754661..1755425) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1553; hypothetical protein 1755425 2660155 BB1651 Bordetella bronchiseptica RB50 hypothetical protein NP_888196.1 1754661 R 257310 CDS NP_888197.1 33600637 2660229 complement(1755422..1756021) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1554; hypothetical protein 1756021 2660229 BB1652 Bordetella bronchiseptica RB50 hypothetical protein NP_888197.1 1755422 R 257310 CDS NP_888198.1 33600638 2662131 complement(1756126..1756971) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1555; hypothetical protein 1756971 2662131 BB1653 Bordetella bronchiseptica RB50 hypothetical protein NP_888198.1 1756126 R 257310 CDS NP_888199.1 33600639 2659202 1757039..1757665 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1556; hypothetical protein 1757665 2659202 BB1654 Bordetella bronchiseptica RB50 hypothetical protein NP_888199.1 1757039 D 257310 CDS NP_888200.1 33600640 2662460 1757698..1758369 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1571; hypothetical protein 1758369 2662460 BB1655 Bordetella bronchiseptica RB50 hypothetical protein NP_888200.1 1757698 D 257310 CDS NP_888201.1 33600641 2661167 1758455..1759360 1 NC_002927.3 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 1759360 dapA 2661167 dapA Bordetella bronchiseptica RB50 dihydrodipicolinate synthase NP_888201.1 1758455 D 257310 CDS NP_888202.1 33600642 2662792 1759372..1760499 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1569; lipoprotein 1760499 2662792 BB1657 Bordetella bronchiseptica RB50 lipoprotein NP_888202.1 1759372 D 257310 CDS NP_888203.1 33600643 2662807 complement(1760587..1761213) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1568; serotype 3 fimbrial subunit precursor 1761213 fim3 2662807 fim3 Bordetella bronchiseptica RB50 serotype 3 fimbrial subunit precursor NP_888203.1 1760587 R 257310 CDS NP_888204.1 33600644 2663107 complement(1761942..1763129) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1567; hypothetical protein 1763129 2663107 BB1659 Bordetella bronchiseptica RB50 hypothetical protein NP_888204.1 1761942 R 257310 CDS NP_888205.1 33600645 2662916 complement(1763126..1765723) 1 NC_002927.3 This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 1765723 mutS 2662916 mutS Bordetella bronchiseptica RB50 DNA mismatch repair protein MutS NP_888205.1 1763126 R 257310 CDS NP_888206.1 33600646 2662900 complement(1765780..1766739) 1 NC_002927.3 Similar to Bacteriophage HK022 integrase SWALL:AAF30377 (EMBL:AF069308) (357 aa) fasta scores: E(): 6.6e-11, 29.88% id in 338 aa, and to Escherichia coli O157:H7 integrase for cryptic prophage cp-933m z1323 or ecs1055 SWALL:Q8XD80 (EMBL:AE005287) (339 aa) fasta scores: E(): 3.1e-19, 29.32% id in 324 aa; integrase 1766739 2662900 BB1661 Bordetella bronchiseptica RB50 integrase NP_888206.1 1765780 R 257310 CDS NP_888207.1 33600647 2663075 complement(1766747..1766959) 1 NC_002927.3 no significant database matches; hypothetical protein 1766959 2663075 BB1662 Bordetella bronchiseptica RB50 hypothetical protein NP_888207.1 1766747 R 257310 CDS NP_888208.1 33600648 2662756 complement(1767116..1767763) 1 NC_002927.3 Similar to Xylella fastidiosa phage-related protein xf0485 SWALL:Q9PG17 (EMBL:AE003898) (181 aa) fasta scores: E(): 6.5e-16, 36.4% id in 206 aa, and to Sinorhizobium meliloti phage PBC5 hypothetical 28.0 kDa protein orf72 SWALL:Q8W6F5 (EMBL:AF448724) (246 aa) fasta scores: E(): 3.7e-14, 35.65% id in 244 aa; hypothetical protein 1767763 2662756 BB1663 Bordetella bronchiseptica RB50 hypothetical protein NP_888208.1 1767116 R 257310 CDS NP_888209.1 33600649 2662906 complement(1767760..1767882) 1 NC_002927.3 no significant database matches; phage-related membrane protein 1767882 2662906 BB1664 Bordetella bronchiseptica RB50 phage-related membrane protein NP_888209.1 1767760 R 257310 CDS NP_888210.1 33600650 2663404 complement(1767875..1768051) 1 NC_002927.3 no significant database matches; hypothetical protein 1768051 2663404 BB1665 Bordetella bronchiseptica RB50 hypothetical protein NP_888210.1 1767875 R 257310 CDS NP_888211.1 33600651 2662875 complement(1768048..1769559) 1 NC_002927.3 no significant database matches; hypothetical protein 1769559 2662875 BB1666 Bordetella bronchiseptica RB50 hypothetical protein NP_888211.1 1768048 R 257310 CDS NP_888212.1 33600652 2663440 complement(1769556..1769789) 1 NC_002927.3 no significant database matches; hypothetical protein 1769789 2663440 BB1667 Bordetella bronchiseptica RB50 hypothetical protein NP_888212.1 1769556 R 257310 CDS NP_888213.1 33600653 2663619 complement(1769786..1771720) 1 NC_002927.3 Similar to Bacteriophage phi-H cytosine methylase dcm5A SWALL:Q38204 (EMBL:X80164) (245 aa) fasta scores: E(): 3e-09, 30.7% id in 241 aa, and to Rhizobium loti modification methylase mlr8517 SWALL:Q982S6 (EMBL:AP003014) (667 aa) fasta scores: E(): 2.4e-41, 40.73% id in 680 aa; modification methylase 1771720 2663619 BB1668 Bordetella bronchiseptica RB50 modification methylase NP_888213.1 1769786 R 257310 CDS NP_888214.1 33600654 2663365 complement(1771722..1772207) 1 NC_002927.3 Similar to Neisseria gonorrhoeae DNA N-4 cytosine methyltransferase m.ngomxv SWALL:Q9AKV2 (EMBL:AJ004687) (153 aa) fasta scores: E(): 8.2e-28, 47.68% id in 151 aa, and to Salmonella typhi methyltransferase sty1026 SWALL:Q8Z7X6 (EMBL:AL627268) (157 aa) fasta scores: E(): 1.2e-39, 60.25% id in 156 aa; methyltransferase 1772207 2663365 BB1669 Bordetella bronchiseptica RB50 methyltransferase NP_888214.1 1771722 R 257310 CDS NP_888215.1 33600655 2663357 complement(1772209..1772550) 1 NC_002927.3 no significant database matches; hypothetical protein 1772550 2663357 BB1670 Bordetella bronchiseptica RB50 hypothetical protein NP_888215.1 1772209 R 257310 CDS NP_888216.1 33600656 2663418 complement(1772547..1772774) 1 NC_002927.3 no significant database matches; hypothetical protein 1772774 2663418 BB1671 Bordetella bronchiseptica RB50 hypothetical protein NP_888216.1 1772547 R 257310 CDS NP_888217.1 33600657 2663433 complement(1772771..1773292) 1 NC_002927.3 no significant database matches; hypothetical protein 1773292 2663433 BB1672 Bordetella bronchiseptica RB50 hypothetical protein NP_888217.1 1772771 R 257310 CDS NP_888218.1 33600658 2663860 complement(1773289..1773933) 1 NC_002927.3 no significant database matches; hypothetical protein 1773933 2663860 BB1673 Bordetella bronchiseptica RB50 hypothetical protein NP_888218.1 1773289 R 257310 CDS NP_888219.1 33600659 2663837 complement(1773930..1774754) 1 NC_002927.3 Similar to Bacteriophage phiE125 Gp58 58 SWALL:Q8W6P2 (EMBL:AF447491) (273 aa) fasta scores: E(): 1.9e-39, 49.43% id in 267 aa, and to Chlamydia muridarum probable chromosome partitioning protein ParB or tc0060 SWALL:PARB_CHLMU (SWALL:Q9PLN9) (280 aa) fasta scores: E(): 0.00047, 25.68% id in 218 aa; hypothetical protein 1774754 2663837 BB1674 Bordetella bronchiseptica RB50 hypothetical protein NP_888219.1 1773930 R 257310 CDS NP_888220.1 33600660 2663827 complement(1774775..1775146) 1 NC_002927.3 no significant database matches; hypothetical protein 1775146 2663827 BB1675 Bordetella bronchiseptica RB50 hypothetical protein NP_888220.1 1774775 R 257310 CDS NP_888221.1 33600661 2663434 complement(1775157..1775393) 1 NC_002927.3 no significant database matches; phage-related membrane protein 1775393 2663434 BB1676 Bordetella bronchiseptica RB50 phage-related membrane protein NP_888221.1 1775157 R 257310 CDS NP_888222.1 33600662 2662963 1775766..1776062 1 NC_002927.3 no significant database matches; hypothetical protein 1776062 2662963 BB1677 Bordetella bronchiseptica RB50 hypothetical protein NP_888222.1 1775766 D 257310 CDS NP_888223.1 33600663 2663015 complement(1776367..1777050) 1 NC_002927.3 Similar to Bacteriophage HK97 prophage repressor CI SWALL:Q9MCQ2 (EMBL:AF069529) (237 aa) fasta scores: E(): 6e-08, 28.88% id in 225 aa, and to Bacteriophage P27 lambda repressor SWALL:Q8W648 (EMBL:AJ298298) (218 aa) fasta scores: E(): 4.7e-10, 32.9% id in 231 aa; phage repressor 1777050 2663015 BB1678 Bordetella bronchiseptica RB50 phage repressor NP_888223.1 1776367 R 257310 CDS NP_888224.1 33600664 2662688 1777452..1777982 1 NC_002927.3 Similar to Ralstonia solanacearum hypothetical protein rsc1675 rsc1675 or rs04063 SWALL:Q8XYT3 (EMBL:AL646065) (167 aa) fasta scores: E(): 0.009, 28.96% id in 145 aa; hypothetical protein 1777982 2662688 BB1679 Bordetella bronchiseptica RB50 hypothetical protein NP_888224.1 1777452 D 257310 CDS NP_888225.1 33600665 2663286 1777979..1778284 1 NC_002927.3 no significant database matches; hypothetical protein 1778284 2663286 BB1680 Bordetella bronchiseptica RB50 hypothetical protein NP_888225.1 1777979 D 257310 CDS NP_888226.1 33600666 2663432 1778277..1778579 1 NC_002927.3 no significant database matches; hypothetical protein 1778579 2663432 BB1681 Bordetella bronchiseptica RB50 hypothetical protein NP_888226.1 1778277 D 257310 CDS NP_888227.1 33600667 2663430 1778576..1779070 1 NC_002927.3 no significant database matches; hypothetical protein 1779070 2663430 BB1682 Bordetella bronchiseptica RB50 hypothetical protein NP_888227.1 1778576 D 257310 CDS NP_888228.1 33600668 2663665 1779067..1780023 1 NC_002927.3 no significant database matches; hypothetical protein 1780023 2663665 BB1683 Bordetella bronchiseptica RB50 hypothetical protein NP_888228.1 1779067 D 257310 CDS NP_888229.1 33600669 2663410 1780265..1780744 1 NC_002927.3 no significant database matches; hypothetical protein 1780744 2663410 BB1684 Bordetella bronchiseptica RB50 hypothetical protein NP_888229.1 1780265 D 257310 CDS NP_888230.1 33600670 2663858 1780741..1781109 1 NC_002927.3 no significant database matches; hypothetical protein 1781109 2663858 BB1685 Bordetella bronchiseptica RB50 hypothetical protein NP_888230.1 1780741 D 257310 CDS NP_888231.1 33600671 2663539 1781109..1781606 1 NC_002927.3 Similar to Bacteriophage D3 Orf76 orf76 SWALL:Q9MC52 (EMBL:AF165214) (169 aa) fasta scores: E(): 1.6e-09, 28.65% id in 171 aa; hypothetical protein 1781606 2663539 BB1686 Bordetella bronchiseptica RB50 hypothetical protein NP_888231.1 1781109 D 257310 CDS NP_888232.1 33600672 2662987 1781607..1782290 1 NC_002927.3 no significant database matches; hypothetical protein 1782290 2662987 BB1687 Bordetella bronchiseptica RB50 hypothetical protein NP_888232.1 1781607 D 257310 CDS NP_888233.1 33600673 2663630 complement(1782547..1782825) 1 NC_002927.3 Similar to Xylella fastidiosa hypothetical protein Xf1563 SWALL:Q9PD17 (EMBL:AE003986) (112 aa) fasta scores: E(): 3.9e-07, 50% id in 108 aa, and to Neisseria meningitidis hypothetical protein Nma1326 SWALL:Q9JUG2 (EMBL:AL162755) (100 aa) fasta scores: E(): 2.8e-05, 40.69% id in 86 aa; hypothetical protein 1782825 2663630 BB1688 Bordetella bronchiseptica RB50 hypothetical protein NP_888233.1 1782547 R 257310 CDS NP_888234.1 33600674 2663873 complement(1782812..1783078) 1 NC_002927.3 Similar to Xylella fastidiosa hypothetical protein Xf1562 SWALL:Q9PD18 (EMBL:AE003986) (88 aa) fasta scores: E(): 6.7e-16, 56.81% id in 88 aa, and to Synechocystis sp. hypothetical protein Sll1965 SWALL:P73378 (EMBL:D90905) (136 aa) fasta scores: E(): 1.5e-05, 38.37% id in 86 aa; hypothetical protein 1783078 2663873 BB1689 Bordetella bronchiseptica RB50 hypothetical protein NP_888234.1 1782812 R 257310 CDS NP_888235.1 33600675 2662911 1783437..1784057 1 NC_002927.3 no significant database matches; phage-related endonuclease 1784057 2662911 BB1690 Bordetella bronchiseptica RB50 phage-related endonuclease NP_888235.1 1783437 D 257310 CDS NP_888236.1 33600676 2663844 1784163..1784582 1 NC_002927.3 no significant database matches; hypothetical protein 1784582 2663844 BB1691 Bordetella bronchiseptica RB50 hypothetical protein NP_888236.1 1784163 D 257310 CDS NP_888237.1 33600677 2663426 1784560..1786329 1 NC_002927.3 Similar to Bacteriophage D3 terminase orf2 SWALL:Q9XJT6 (EMBL:AF165214) (563 aa) fasta scores: E(): 1e-25, 32.43% id in 592 aa, and to Bacteriophage P27 terminase SWALL:Q8W631 (EMBL:AJ298298) (570 aa) fasta scores: E(): 1.4e-28, 29.69% id in 586 aa; terminase 1786329 2663426 BB1692 Bordetella bronchiseptica RB50 terminase NP_888237.1 1784560 D 257310 CDS NP_888238.1 33600678 2663371 1786326..1787621 1 NC_002927.3 Similar to Bacteriophage D3 portal protein orf4 SWALL:Q9XJT5 (EMBL:AF165214) (434 aa) fasta scores: E(): 2.4e-69, 44.44% id in 414 aa, and to Bacteriophage HK97 portal protein 3 SWALL:VP3_BPHK7 (SWALL:P49859) (424 aa) fasta scores: E(): 1.5e-31, 31.68% id in 385 aa; portal protein 1787621 2663371 BB1693 Bordetella bronchiseptica RB50 portal protein NP_888238.1 1786326 D 257310 CDS NP_888239.1 33600679 2662779 1787633..1788508 1 NC_002927.3 Similar to Bacteriophage D3 ClpP protease orf5 SWALL:Q9XJT4 (EMBL:AF165214) (296 aa) fasta scores: E(): 1.8e-53, 54% id in 287 aa, and to Rhizobium loti hypothetical protein Mlr8523 SWALL:Q982R9 (EMBL:AP003014) (281 aa) fasta scores: E(): 1.5e-36, 44.77% id in 268 aa; phage-related Clp protease 1788508 2662779 BB1694 Bordetella bronchiseptica RB50 phage-related Clp protease NP_888239.1 1787633 D 257310 CDS NP_888240.1 33600680 2663531 1788513..1789712 1 NC_002927.3 Similar to Bacteriophage D3 major head protein orf6 SWALL:Q9XJT3 (EMBL:AF165214) (395 aa) fasta scores: E(): 7.8e-60, 46.58% id in 395 aa, and to Bacteriophage HK022 major capsid subunit precursor SWALL:AAF30357 (EMBL:AF069308) (385 aa) fasta scores: E(): 1.1e-49, 42.38% id in 394 aa; major head protein 1789712 2663531 BB1695 Bordetella bronchiseptica RB50 major head protein NP_888240.1 1788513 D 257310 CDS NP_888241.1 33600681 2663700 1789762..1789995 1 NC_002927.3 no significant database matches; hypothetical protein 1789995 2663700 BB1696 Bordetella bronchiseptica RB50 hypothetical protein NP_888241.1 1789762 D 257310 CDS NP_888242.1 33600682 2663796 1789998..1790327 1 NC_002927.3 Similar to Bacteriophage D3 Orf9 SWALL:Q9XJT1 (EMBL:AF165214) (106 aa) fasta scores: E(): 1.7e-16, 57.79% id in 109 aa; hypothetical protein 1790327 2663796 BB1697 Bordetella bronchiseptica RB50 hypothetical protein NP_888242.1 1789998 D 257310 CDS NP_888243.1 33600683 2663009 1790324..1790701 1 NC_002927.3 Similar to Bacteriophage D3 Orf10 SWALL:Q9XJT0 (EMBL:AF165214) (118 aa) fasta scores: E(): 7.7e-21, 49.19% id in 124 aa, and to Bacteriophage HK022 Gp9 SWALL:Q9MCV2 (EMBL:AF069308) (110 aa) fasta scores: E(): 0.37, 30.46% id in 128 aa; hypothetical protein 1790701 2663009 BB1698 Bordetella bronchiseptica RB50 hypothetical protein NP_888243.1 1790324 D 257310 CDS NP_888244.1 33600684 2663508 1790704..1790922 1 NC_002927.3 no significant database matches; hypothetical protein 1790922 2663508 BB1699 Bordetella bronchiseptica RB50 hypothetical protein NP_888244.1 1790704 D 257310 CDS NP_888245.1 33600685 2662977 1790919..1791404 1 NC_002927.3 no significant database matches; hypothetical protein 1791404 2662977 BB1700 Bordetella bronchiseptica RB50 hypothetical protein NP_888245.1 1790919 D 257310 CDS NP_888246.1 33600686 2663737 1791404..1791775 1 NC_002927.3 Similar to Bacteriophage D3 Orf15 orf15 SWALL:Q9MCA6 (EMBL:AF165214) (121 aa) fasta scores: E(): 2.8e-10, 37.6% id in 125 aa, and to Bacteriophage HK022 gp11 SWALL:Q9MCV0 (EMBL:AF069308) (121 aa) fasta scores: E(): 5.7e-08, 32.79% id in 125 aa; hypothetical protein 1791775 2663737 BB1701 Bordetella bronchiseptica RB50 hypothetical protein NP_888246.1 1791404 D 257310 CDS NP_888247.1 33600687 2663733 1791838..1792335 1 NC_002927.3 Similar to Bacteriophage D3 orf15 orf16 SWALL:Q9MCA5 (EMBL:AF165214) (173 aa) fasta scores: E(): 2.6e-07, 35.63% id in 174 aa, and to Pseudomonas aeruginosa vf2 protein or pa0633 SWALL:Q9R3G3 (EMBL:AB030825) (164 aa) fasta scores: E(): 4.6e-09, 32.53% id in 166 aa; hypothetical protein 1792335 2663733 BB1702 Bordetella bronchiseptica RB50 hypothetical protein NP_888247.1 1791838 D 257310 CDS NP_888248.1 33600688 2663823 1792345..1792677 1 NC_002927.3 no significant database matches; hypothetical protein 1792677 2663823 BB1703 Bordetella bronchiseptica RB50 hypothetical protein NP_888248.1 1792345 D 257310 CDS NP_888249.1 33600689 2662922 1792737..1793003 1 NC_002927.3 no significant database matches; hypothetical protein 1793003 2662922 BB1704 Bordetella bronchiseptica RB50 hypothetical protein NP_888249.1 1792737 D 257310 CDS NP_888250.1 33600690 2663834 1793117..1793476 1 NC_002927.3 no significant database matches; hypothetical protein 1793476 2663834 BB1705 Bordetella bronchiseptica RB50 hypothetical protein NP_888250.1 1793117 D 257310 CDS NP_888251.1 33600691 2663031 1793694..1796516 1 NC_002927.3 Similar to Escherichia coli O157:H7 minor tail protein precursor H or ecs2949 SWALL:Q9EYE1 (EMBL:AP000400) (881 aa) fasta scores: E(): 4.9e-18, 24.74% id in 885 aa, and to Salmonella typhimurium fels-1 prophage, minor tail protein stm0918 SWALL:Q8ZQG3 (EMBL:AE008738) (1053 aa) fasta scores: E(): 6e-14, 22.86% id in 888 aa; tail component of prophage 1796516 2663031 BB1706 Bordetella bronchiseptica RB50 tail component of prophage NP_888251.1 1793694 D 257310 CDS NP_888252.1 33600692 2663810 1796518..1796865 1 NC_002927.3 no significant database matches; hypothetical protein 1796865 2663810 BB1707 Bordetella bronchiseptica RB50 hypothetical protein NP_888252.1 1796518 D 257310 CDS NP_888253.1 33600693 2663809 1796867..1797343 1 NC_002927.3 no significant database matches; hypothetical protein 1797343 2663809 BB1708 Bordetella bronchiseptica RB50 hypothetical protein NP_888253.1 1796867 D 257310 CDS NP_888254.1 33600694 2663763 1797343..1797729 1 NC_002927.3 no significant database matches; hypothetical protein 1797729 2663763 BB1709 Bordetella bronchiseptica RB50 hypothetical protein NP_888254.1 1797343 D 257310 CDS NP_888255.1 33600695 2663829 1797756..1801562 1 NC_002927.3 no significant database matches; hypothetical protein 1801562 2663829 BB1710 Bordetella bronchiseptica RB50 hypothetical protein NP_888255.1 1797756 D 257310 CDS NP_888256.1 33600696 2663888 1801567..1802343 1 NC_002927.3 no significant database matches; hypothetical protein 1802343 2663888 BB1711 Bordetella bronchiseptica RB50 hypothetical protein NP_888256.1 1801567 D 257310 CDS NP_888257.1 33600697 2661676 1802340..1802729 1 NC_002927.3 no significant database matches; hypothetical protein 1802729 2661676 BB1712 Bordetella bronchiseptica RB50 hypothetical protein NP_888257.1 1802340 D 257310 CDS NP_888258.1 33600698 2661629 1802789..1803259 1 NC_002927.3 no significant database matches; phage-related membrane protein 1803259 2661629 BB1713 Bordetella bronchiseptica RB50 phage-related membrane protein NP_888258.1 1802789 D 257310 CDS NP_888259.1 33600699 2660148 1803256..1803804 1 NC_002927.3 no significant database matches; hypothetical protein 1803804 2660148 BB1714 Bordetella bronchiseptica RB50 hypothetical protein NP_888259.1 1803256 D 257310 CDS NP_888260.1 33600700 2661711 1803804..1804070 1 NC_002927.3 no significant database matches; hypothetical protein 1804070 2661711 BB1715 Bordetella bronchiseptica RB50 hypothetical protein NP_888260.1 1803804 D 257310 CDS NP_888261.1 33600701 2659634 complement(1804172..1804498) 1 NC_002927.3 no significant database matches; hypothetical protein 1804498 2659634 BB1716 Bordetella bronchiseptica RB50 hypothetical protein NP_888261.1 1804172 R 257310 CDS NP_888262.1 33600702 2662160 complement(1804550..1805209) 1 NC_002927.3 Similar to Bacteriophage phiE125 gp33 33 SWALL:Q8W6R8 (EMBL:AF447491) (223 aa) fasta scores: E(): 8.8e-13, 34.73% id in 167 aa, and to Pseudomonas syringae pv. maculicola hypothetical 24.0 kDa protein SWALL:Q93TE6 (EMBL:AF359557) (213 aa) fasta scores: E(): 3.7e-36, 49.54% id in 218 aa; hypothetical protein 1805209 2662160 BB1717 Bordetella bronchiseptica RB50 hypothetical protein NP_888262.1 1804550 R 257310 CDS NP_888263.1 33600703 2660217 1805664..1805879 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1565; hypothetical protein 1805879 2660217 BB1718 Bordetella bronchiseptica RB50 hypothetical protein NP_888263.1 1805664 D 257310 CDS NP_888264.1 33600704 2661726 complement(1806335..1806889) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1563; chromate reductase 1806889 2661726 BB1719 Bordetella bronchiseptica RB50 chromate reductase NP_888264.1 1806335 R 257310 CDS NP_888265.1 33600705 2660142 1807168..1807716 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1562; hypothetical protein 1807716 2660142 BB1720 Bordetella bronchiseptica RB50 hypothetical protein NP_888265.1 1807168 D 257310 CDS NP_888266.1 33600706 2660255 1807828..1809132 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1561; hypothetical protein 1809132 2660255 BB1721 Bordetella bronchiseptica RB50 hypothetical protein NP_888266.1 1807828 D 257310 CDS NP_888267.1 33600707 2659169 1809129..1810640 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1560; hypothetical protein 1810640 2659169 BB1722 Bordetella bronchiseptica RB50 hypothetical protein NP_888267.1 1809129 D 257310 CDS NP_888268.1 33600708 2661694 1810670..1811758 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1559; hypothetical protein 1811758 2661694 BB1723 Bordetella bronchiseptica RB50 hypothetical protein NP_888268.1 1810670 D 257310 CDS NP_888269.1 33600709 2661707 1811748..1812854 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1558; hypothetical protein 1812854 2661707 BB1724 Bordetella bronchiseptica RB50 hypothetical protein NP_888269.1 1811748 D 257310 CDS NP_888270.1 33600710 2661292 1812960..1813793 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1898; hypothetical protein 1813793 2661292 BB1725 Bordetella bronchiseptica RB50 hypothetical protein NP_888270.1 1812960 D 257310 CDS NP_888271.1 33600711 2661495 complement(1813800..1814618) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1899; transcriptional regulator 1814618 2661495 BB1726 Bordetella bronchiseptica RB50 transcriptional regulator NP_888271.1 1813800 R 257310 CDS NP_888272.1 33600712 2660269 1814720..1815712 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1900; hypothetical protein 1815712 2660269 BB1727 Bordetella bronchiseptica RB50 hypothetical protein NP_888272.1 1814720 D 257310 CDS NP_888273.1 33600713 2660182 complement(1815931..1816707) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1901; methyltransferase 1816707 2660182 BB1728 Bordetella bronchiseptica RB50 methyltransferase NP_888273.1 1815931 R 257310 CDS NP_888274.1 33600714 2660091 1816815..1817597 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1902; probable inositol monophosphatase; inositol-1-monophosphatase 1817597 suhB 2660091 suhB Bordetella bronchiseptica RB50 inositol-1-monophosphatase NP_888274.1 1816815 D 257310 CDS NP_888275.1 33600715 2661715 1817752..1819338 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1903; hypothetical protein 1819338 2661715 BB1730 Bordetella bronchiseptica RB50 hypothetical protein NP_888275.1 1817752 D 257310 CDS NP_888276.1 33600716 2661924 1819363..1820226 1 NC_002927.3 BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase 1820226 uppP 2661924 uppP Bordetella bronchiseptica RB50 undecaprenyl pyrophosphate phosphatase NP_888276.1 1819363 D 257310 CDS NP_888277.1 33600717 2661904 complement(1820381..1821157) 1 NC_002927.3 catalyzes the formation of 2,3=diacylglucosamine 1-phosphate from UDP-2,3=diacylglucosamine; UDP-2,3-diacylglucosamine hydrolase 1821157 lpxH 2661904 lpxH Bordetella bronchiseptica RB50 UDP-2,3-diacylglucosamine hydrolase NP_888277.1 1820381 R 257310 CDS NP_888278.1 33600718 2662248 complement(1821150..1821659) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1906; peptidyl-prolyl cis-trans isomerase B 1821659 ppiB 2662248 ppiB Bordetella bronchiseptica RB50 peptidyl-prolyl cis-trans isomerase B NP_888278.1 1821150 R 257310 CDS NP_888279.1 33600719 2661900 complement(1821788..1822471) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1907; hypothetical protein 1822471 2661900 BB1734 Bordetella bronchiseptica RB50 hypothetical protein NP_888279.1 1821788 R 257310 CDS NP_888280.1 33600720 2662322 1822711..1824168 1 NC_002927.3 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 1824168 cysS 2662322 cysS Bordetella bronchiseptica RB50 cysteinyl-tRNA synthetase NP_888280.1 1822711 D 257310 CDS NP_888281.1 33600721 2662330 1824189..1824833 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1909; DNA-3-methyladenine glycosylase 1824833 2662330 BB1736 Bordetella bronchiseptica RB50 DNA-3-methyladenine glycosylase NP_888281.1 1824189 D 257310 CDS NP_888282.1 33600722 2662304 1824870..1825835 1 NC_002927.3 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha 1825835 accA 2662304 accA Bordetella bronchiseptica RB50 acetyl-CoA carboxylase carboxyltransferase subunit alpha NP_888282.1 1824870 D 257310 CDS NP_888283.1 33600723 2662351 1825896..1826930 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1912; hypothetical protein 1826930 2662351 BB1738 Bordetella bronchiseptica RB50 hypothetical protein NP_888283.1 1825896 D 257310 CDS NP_888284.1 33600724 2662342 1827003..1828295 1 NC_002927.3 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase 1828295 ask 2662342 ask Bordetella bronchiseptica RB50 aspartate kinase NP_888284.1 1827003 D 257310 CDS NP_888285.1 33600725 2662396 1828838..1829338 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1915; hypothetical protein 1829338 2662396 BB1740 Bordetella bronchiseptica RB50 hypothetical protein NP_888285.1 1828838 D 257310 CDS NP_888286.1 33600726 2662287 1829380..1829694 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1916; hypothetical protein 1829694 2662287 BB1741 Bordetella bronchiseptica RB50 hypothetical protein NP_888286.1 1829380 D 257310 CDS NP_888287.1 33600727 2662367 1829704..1830645 1 NC_002927.3 Converts (S)-3-hydroxyactk-CoA to 3-oxoayl-CoA; 3-hydroxyacyl-CoA dehydrogenase 1830645 2662367 BB1742 Bordetella bronchiseptica RB50 3-hydroxyacyl-CoA dehydrogenase NP_888287.1 1829704 D 257310 CDS NP_888288.1 33600728 2662286 1830642..1831166 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1918; hypothetical protein 1831166 2662286 BB1743 Bordetella bronchiseptica RB50 hypothetical protein NP_888288.1 1830642 D 257310 CDS NP_888289.1 33600729 2662450 1831169..1832437 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1919; hypothetical protein 1832437 2662450 BB1744 Bordetella bronchiseptica RB50 hypothetical protein NP_888289.1 1831169 D 257310 CDS NP_888290.1 33600730 2662459 1832466..1833449 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1920; hypothetical protein 1833449 2662459 BB1745 Bordetella bronchiseptica RB50 hypothetical protein NP_888290.1 1832466 D 257310 CDS NP_888291.1 33600731 2662461 1833446..1834255 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1921; hydrolase 1834255 bioH 2662461 bioH Bordetella bronchiseptica RB50 hydrolase NP_888291.1 1833446 D 257310 CDS NP_888292.1 33600732 2662476 1834252..1835055 1 NC_002927.3 catalyzes the formation of L-aspartate to iminoaspartate in NAD(+) biosynthesis; L-aspartate dehydrogenase 1835055 2662476 BB1747 Bordetella bronchiseptica RB50 L-aspartate dehydrogenase NP_888292.1 1834252 D 257310 CDS NP_888293.1 33600733 2662489 1835070..1835837 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1923; short chain dehydrogenase 1835837 2662489 BB1748 Bordetella bronchiseptica RB50 short chain dehydrogenase NP_888293.1 1835070 D 257310 CDS NP_888294.1 33600734 2662532 1835925..1836563 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1924; TetR family transcriptional regulator 1836563 2662532 BB1749 Bordetella bronchiseptica RB50 TetR family transcriptional regulator NP_888294.1 1835925 D 257310 CDS NP_888295.1 33600735 2662457 complement(1836568..1837521) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1925; LysR family transcriptional regulator 1837521 2662457 BB1750 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_888295.1 1836568 R 257310 CDS NP_888296.1 33600736 2662577 1837633..1838757 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1926; spermidine/putrescine ABC transporter substrate-binding protein 1838757 2662577 BB1751 Bordetella bronchiseptica RB50 spermidine/putrescine ABC transporter substrate-binding protein NP_888296.1 1837633 D 257310 CDS NP_888297.1 33600737 2662549 1838768..1840408 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1927; hypothetical protein 1840408 2662549 BB1752 Bordetella bronchiseptica RB50 hypothetical protein NP_888297.1 1838768 D 257310 CDS NP_888298.1 33600738 2662570 1840411..1841238 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1928; ABC transporter permease 1841238 2662570 BB1753 Bordetella bronchiseptica RB50 ABC transporter permease NP_888298.1 1840411 D 257310 CDS NP_888299.1 33600739 2662576 1841235..1842038 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1929; ABC transporter permease 1842038 2662576 BB1754 Bordetella bronchiseptica RB50 ABC transporter permease NP_888299.1 1841235 D 257310 CDS NP_888300.1 33600740 2659025 1842035..1843126 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1930; ABC transporter ATP-binding protein 1843126 2659025 BB1755 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_888300.1 1842035 D 257310 CDS NP_888301.1 33600741 2662515 complement(1843504..1844532) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1931; NADH-dependent flavin oxidoreductase 1844532 2662515 BB1756 Bordetella bronchiseptica RB50 NADH-dependent flavin oxidoreductase NP_888301.1 1843504 R 257310 CDS NP_888302.1 33600742 2662565 complement(1844529..1845395) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1932; transcriptional regulator 1845395 2662565 BB1757 Bordetella bronchiseptica RB50 transcriptional regulator NP_888302.1 1844529 R 257310 CDS NP_888303.1 33600743 2662513 complement(1845404..1847524) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1933; pimeloyl-CoA synthetase 1847524 2662513 BB1758 Bordetella bronchiseptica RB50 pimeloyl-CoA synthetase NP_888303.1 1845404 R 257310 CDS NP_888304.1 33600744 2662440 complement(1847525..1848550) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1934; hypothetical protein 1848550 2662440 BB1759 Bordetella bronchiseptica RB50 hypothetical protein NP_888304.1 1847525 R 257310 CDS NP_888305.1 33600745 2662491 complement(1848550..1848942) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1935; hypothetical protein 1848942 2662491 BB1760 Bordetella bronchiseptica RB50 hypothetical protein NP_888305.1 1848550 R 257310 CDS NP_888306.1 33600746 2662486 complement(1848946..1849434) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1936; hypothetical protein 1849434 2662486 BB1761 Bordetella bronchiseptica RB50 hypothetical protein NP_888306.1 1848946 R 257310 CDS NP_888307.1 33600747 2662426 complement(1849448..1849783) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1937; hypothetical protein 1849783 2662426 BB1762 Bordetella bronchiseptica RB50 hypothetical protein NP_888307.1 1849448 R 257310 CDS NP_888308.1 33600748 2662483 complement(1849790..1850239) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1938; hypothetical protein 1850239 2662483 BB1763 Bordetella bronchiseptica RB50 hypothetical protein NP_888308.1 1849790 R 257310 CDS NP_888309.1 33600749 2662430 1850447..1850746 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1939; ArsR family transcriptional regulator 1850746 2662430 BB1764 Bordetella bronchiseptica RB50 ArsR family transcriptional regulator NP_888309.1 1850447 D 257310 CDS NP_888310.1 33600750 2662405 1850788..1851900 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1940; N-ethylmaleimide reductase 1851900 nemA 2662405 nemA Bordetella bronchiseptica RB50 N-ethylmaleimide reductase NP_888310.1 1850788 D 257310 CDS NP_888311.1 33600751 2662472 complement(1851905..1852555) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1941; hypothetical protein 1852555 2662472 BB1766 Bordetella bronchiseptica RB50 hypothetical protein NP_888311.1 1851905 R 257310 CDS NP_888312.1 33600752 2662454 complement(1852536..1853795) 1 NC_002927.3 predicted polysaccharide polymerase involved in biofilm formation; required for the synthesis of the beta-1,6-N-acetylglucosamine polysaccharide; PgaC; in Yersinia the HmsR protein is an inner membrane protein; N-glycosyltransferase 1853795 hmsR 2662454 hmsR Bordetella bronchiseptica RB50 N-glycosyltransferase NP_888312.1 1852536 R 257310 CDS NP_888313.1 33600753 2662388 complement(1853799..1855904) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1943; hemin storage protein 1855904 hmsF 2662388 hmsF Bordetella bronchiseptica RB50 hemin storage protein NP_888313.1 1853799 R 257310 CDS NP_888314.1 33600754 2662421 complement(1855910..1857895) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1944; hemin storage protein 1857895 hmsH 2662421 hmsH Bordetella bronchiseptica RB50 hemin storage protein NP_888314.1 1855910 R 257310 CDS NP_888315.1 33600755 2662441 1858104..1858340 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1945; hypothetical protein 1858340 2662441 BB1770 Bordetella bronchiseptica RB50 hypothetical protein NP_888315.1 1858104 D 257310 CDS NP_888316.1 33600756 2662375 1858687..1859172 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1946; MarR family transcriptional regulator 1859172 2662375 BB1771 Bordetella bronchiseptica RB50 MarR family transcriptional regulator NP_888316.1 1858687 D 257310 CDS NP_888317.1 33600757 2662432 1859488..1860696 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1948; branched-chain amino acid-binding protein 1860696 2662432 BB1772 Bordetella bronchiseptica RB50 branched-chain amino acid-binding protein NP_888317.1 1859488 D 257310 CDS NP_888318.1 33600758 2662346 1860788..1862737 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1949; branched-chain amino acid ABCtransporter permease 1862737 2662346 BB1773 Bordetella bronchiseptica RB50 branched-chain amino acid ABCtransporter permease NP_888318.1 1860788 D 257310 CDS NP_888319.1 33600759 2662376 1862734..1863510 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1950; branched-chain amino acid ABC transporter ATP-binding protein 1863510 2662376 BB1774 Bordetella bronchiseptica RB50 branched-chain amino acid ABC transporter ATP-binding protein NP_888319.1 1862734 D 257310 CDS NP_888320.1 33600760 2662338 1863507..1864277 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1951; branched-chain amino acid ABC transporter ATP-binding protein 1864277 2662338 BB1775 Bordetella bronchiseptica RB50 branched-chain amino acid ABC transporter ATP-binding protein NP_888320.1 1863507 D 257310 CDS NP_888321.1 33600761 2662320 complement(1864431..1867271) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1952; cytochrome 1867271 2662320 BB1776 Bordetella bronchiseptica RB50 cytochrome NP_888321.1 1864431 R 257310 CDS NP_888322.1 33600762 2662311 complement(1867268..1867756) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1953; oxidoreductase 1867756 2662311 BB1777 Bordetella bronchiseptica RB50 oxidoreductase NP_888322.1 1867268 R 257310 CDS NP_888323.1 33600763 2661899 complement(1867866..1869017) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1954; monooxygenase 1869017 2661899 BB1778 Bordetella bronchiseptica RB50 monooxygenase NP_888323.1 1867866 R 257310 CDS NP_888324.1 33600764 2661674 1869318..1870070 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1955; maleate cis-trans isomerase 1870070 maiA 2661674 maiA Bordetella bronchiseptica RB50 maleate cis-trans isomerase NP_888324.1 1869318 D 257310 CDS NP_888325.1 33600765 2660199 1870090..1870911 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1956; alpha/beta hydrolase 1870911 2660199 BB1780 Bordetella bronchiseptica RB50 alpha/beta hydrolase NP_888325.1 1870090 D 257310 CDS NP_888326.1 33600766 2661880 1870939..1871970 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1957; hypothetical protein 1871970 2661880 BB1781 Bordetella bronchiseptica RB50 hypothetical protein NP_888326.1 1870939 D 257310 CDS NP_888327.1 33600767 2660211 1871986..1872603 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1958; isochorismatase 1872603 2660211 BB1782 Bordetella bronchiseptica RB50 isochorismatase NP_888327.1 1871986 D 257310 CDS NP_888328.1 33600768 2661743 1872600..1874924 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1960; aldehyde dehydrogenase 1874924 2661743 BB1783 Bordetella bronchiseptica RB50 aldehyde dehydrogenase NP_888328.1 1872600 D 257310 CDS NP_888329.1 33600769 2661801 1874975..1876381 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1961; flavocytochrome 1876381 2661801 BB1784 Bordetella bronchiseptica RB50 flavocytochrome NP_888329.1 1874975 D 257310 CDS NP_888330.1 33600770 2660040 complement(1876392..1878500) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1962; ferrisiderophore receptor 1878500 bfrI 2660040 bfrI Bordetella bronchiseptica RB50 ferrisiderophore receptor NP_888330.1 1876392 R 257310 CDS NP_888331.1 33600771 2662078 complement(1878627..1879154) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1963; transcriptional regulator 1879154 2662078 BB1786 Bordetella bronchiseptica RB50 transcriptional regulator NP_888331.1 1878627 R 257310 CDS NP_888332.1 33600772 2661663 1879248..1880213 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1965; hypothetical protein 1880213 2661663 BB1787 Bordetella bronchiseptica RB50 hypothetical protein NP_888332.1 1879248 D 257310 CDS NP_888333.1 33600773 2661187 1880230..1881795 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1966; sulfatase 1881795 2661187 BB1788 Bordetella bronchiseptica RB50 sulfatase NP_888333.1 1880230 D 257310 CDS NP_888334.1 33600774 2661194 complement(1881817..1883490) 1 NC_002927.3 long-chain-fatty-acid--CoA ligase 1883490 fadD 2661194 fadD Bordetella bronchiseptica RB50 long-chain-fatty-acid--CoA ligase NP_888334.1 1881817 R 257310 CDS NP_888335.1 33600775 2661749 complement(1883499..1884047) 1 NC_002927.3 hypothetical protein 1884047 2661749 BB1790 Bordetella bronchiseptica RB50 hypothetical protein NP_888335.1 1883499 R 257310 CDS NP_888336.1 33600776 2659405 complement(1884044..1885243) 1 NC_002927.3 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 1885243 2659405 BB1791 Bordetella bronchiseptica RB50 acetyl-CoA acetyltransferase NP_888336.1 1884044 R 257310 CDS NP_888337.1 33600777 2659165 complement(1885253..1887643) 1 NC_002927.3 3-hydroxyacyl-CoA dehydrogenase oxidoreductase 1887643 2659165 BB1792 Bordetella bronchiseptica RB50 3-hydroxyacyl-CoA dehydrogenase oxidoreductase NP_888337.1 1885253 R 257310 CDS NP_888338.1 33600778 2659390 complement(1887714..1889018) 1 NC_002927.3 fatty acid transport system, membrane protein 1889018 2659390 BB1793 Bordetella bronchiseptica RB50 fatty acid transport system, membrane protein NP_888338.1 1887714 R 257310 CDS NP_888339.1 33600779 2661655 complement(1889090..1891033) 1 NC_002927.3 enoyl-CoA hydratase 1891033 2661655 BB1794 Bordetella bronchiseptica RB50 enoyl-CoA hydratase NP_888339.1 1889090 R 257310 CDS NP_888340.1 33600780 2660224 complement(1891030..1892322) 1 NC_002927.3 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 1892322 2660224 BB1795 Bordetella bronchiseptica RB50 acetyl-CoA acetyltransferase NP_888340.1 1891030 R 257310 CDS NP_888341.1 33600781 2659716 complement(1892335..1894683) 1 NC_002927.3 functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; acyl-CoA dehydrogenase 1894683 fadE 2659716 fadE Bordetella bronchiseptica RB50 acyl-CoA dehydrogenase NP_888341.1 1892335 R 257310 CDS NP_888342.1 33600782 2659753 complement(1894709..1895374) 1 NC_002927.3 TetR family transcriptional regulator 1895374 2659753 BB1797 Bordetella bronchiseptica RB50 TetR family transcriptional regulator NP_888342.1 1894709 R 257310 CDS NP_888343.1 33600783 2660190 1896537..1897301 1 NC_002927.3 LuxR family transcriptional regulator 1897301 2660190 BB1798 Bordetella bronchiseptica RB50 LuxR family transcriptional regulator NP_888343.1 1896537 D 257310 CDS NP_888344.1 33600784 2659319 1897611..1898267 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1969; LuxR family transcriptional regulator 1898267 2659319 BB1799 Bordetella bronchiseptica RB50 LuxR family transcriptional regulator NP_888344.1 1897611 D 257310 CDS NP_888345.1 33600785 2659382 1898369..1899796 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1970; phosphoglucomutase 1899796 pgm 2659382 pgm Bordetella bronchiseptica RB50 phosphoglucomutase NP_888345.1 1898369 D 257310 CDS NP_888346.1 33600786 2661198 1899806..1901377 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1971; glucose-6-phosphate isomerase 1901377 pgi 2661198 pgi Bordetella bronchiseptica RB50 glucose-6-phosphate isomerase NP_888346.1 1899806 D 257310 CDS NP_888347.1 33600787 2661759 1901560..1902513 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1972; serine acetyltransferase 1902513 srpH 2661759 srpH Bordetella bronchiseptica RB50 serine acetyltransferase NP_888347.1 1901560 D 257310 CDS NP_888348.1 33600788 2659378 1902575..1903801 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1973; hypothetical protein 1903801 2659378 BB1803 Bordetella bronchiseptica RB50 hypothetical protein NP_888348.1 1902575 D 257310 CDS NP_888349.1 33600789 2660140 1903814..1904638 1 NC_002927.3 Modulates the activities of several enzymes which are inactive in their acetylated form; NAD-dependent deacetylase 1904638 2660140 BB1804 Bordetella bronchiseptica RB50 NAD-dependent deacetylase NP_888349.1 1903814 D 257310 CDS NP_888350.1 33600790 2661738 complement(1904762..1905628) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1975; inositol monophosphatase 1905628 2661738 BB1805 Bordetella bronchiseptica RB50 inositol monophosphatase NP_888350.1 1904762 R 257310 CDS NP_888351.1 33600791 2661783 complement(1905790..1907259) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1976; succinate-semialdehyde dehydrogenase 1907259 gabD 2661783 gabD Bordetella bronchiseptica RB50 succinate-semialdehyde dehydrogenase NP_888351.1 1905790 R 257310 CDS NP_888352.1 33600792 2661647 complement(1907339..1908604) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1977; 4-aminobutyrate aminotransferase 1908604 goaG 2661647 goaG Bordetella bronchiseptica RB50 4-aminobutyrate aminotransferase NP_888352.1 1907339 R 257310 CDS NP_888353.1 33600793 2660251 1908801..1910234 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1978; GntR family transcriptional regulator 1910234 2660251 BB1808 Bordetella bronchiseptica RB50 GntR family transcriptional regulator NP_888353.1 1908801 D 257310 CDS NP_888354.1 33600794 2660133 complement(1910235..1911215) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1979; hypothetical protein 1911215 2660133 BB1809 Bordetella bronchiseptica RB50 hypothetical protein NP_888354.1 1910235 R 257310 CDS NP_888355.1 33600795 2660231 1911214..1913307 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1980; ATP-dependent DNA helicase 1913307 2660231 BB1810 Bordetella bronchiseptica RB50 ATP-dependent DNA helicase NP_888355.1 1911214 D 257310 CDS NP_888356.1 33600796 2660254 1913386..1914390 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1981; magnesium transporter 1914390 2660254 BB1811 Bordetella bronchiseptica RB50 magnesium transporter NP_888356.1 1913386 D 257310 CDS NP_888357.1 33600797 2661627 1914453..1915091 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1982; nuclease 1915091 2661627 BB1812 Bordetella bronchiseptica RB50 nuclease NP_888357.1 1914453 D 257310 CDS NP_888358.1 33600798 2660184 1915188..1917437 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1983; Ser/Thr protein kinase 1917437 2660184 BB1813 Bordetella bronchiseptica RB50 Ser/Thr protein kinase NP_888358.1 1915188 D 257310 CDS NP_888359.1 33600799 2660122 1917434..1918411 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1984; oligopeptide transport system permease 1918411 2660122 BB1814 Bordetella bronchiseptica RB50 oligopeptide transport system permease NP_888359.1 1917434 D 257310 CDS NP_888360.1 33600800 2661915 1918417..1919868 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1985; oligopeptide transport integral membrane protein 1919868 2661915 BB1815 Bordetella bronchiseptica RB50 oligopeptide transport integral membrane protein NP_888360.1 1918417 D 257310 CDS NP_888361.1 33600801 2662256 1919865..1921541 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1986; ABC transporter ATP-binding protein 1921541 2662256 BB1816 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_888361.1 1919865 D 257310 CDS NP_888362.1 33600802 2663641 complement(1921590..1922141) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1987; MarR family transcriptional regulator 1922141 2663641 BB1817 Bordetella bronchiseptica RB50 MarR family transcriptional regulator NP_888362.1 1921590 R 257310 CDS NP_888363.1 33600803 2663195 complement(1922175..1923782) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1988; hypothetical protein 1923782 2663195 BB1818 Bordetella bronchiseptica RB50 hypothetical protein NP_888363.1 1922175 R 257310 CDS NP_888364.1 33600804 2663045 complement(1924087..1925799) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1989; hypothetical protein 1925799 2663045 BB1819 Bordetella bronchiseptica RB50 hypothetical protein NP_888364.1 1924087 R 257310 CDS NP_888365.1 33600805 2662813 1926274..1927074 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1990; hypothetical protein 1927074 2662813 BB1820 Bordetella bronchiseptica RB50 hypothetical protein NP_888365.1 1926274 D 257310 CDS NP_888366.1 33600806 2662837 1927172..1927348 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1991; hypothetical protein 1927348 2662837 BB1821 Bordetella bronchiseptica RB50 hypothetical protein NP_888366.1 1927172 D 257310 CDS NP_888367.1 33600807 2663205 1927418..1927942 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1992; hypothetical protein 1927942 2663205 BB1822 Bordetella bronchiseptica RB50 hypothetical protein NP_888367.1 1927418 D 257310 CDS NP_888368.1 33600808 2662847 1927939..1928346 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1993; hypothetical protein 1928346 2662847 BB1823 Bordetella bronchiseptica RB50 hypothetical protein NP_888368.1 1927939 D 257310 CDS NP_888369.1 33600809 2663278 1928348..1928824 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1994; hypothetical protein 1928824 2663278 BB1824 Bordetella bronchiseptica RB50 hypothetical protein NP_888369.1 1928348 D 257310 CDS NP_888370.1 33600810 2663422 1928821..1929762 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1995; hypothetical protein 1929762 2663422 BB1825 Bordetella bronchiseptica RB50 hypothetical protein NP_888370.1 1928821 D 257310 CDS NP_888371.1 33600811 2663672 1929818..1931164 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1996; type II secretion system protein 1931164 2663672 BB1826 Bordetella bronchiseptica RB50 type II secretion system protein NP_888371.1 1929818 D 257310 CDS NP_888372.1 33600812 2663082 1931161..1932510 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1997; hypothetical protein 1932510 2663082 BB1827 Bordetella bronchiseptica RB50 hypothetical protein NP_888372.1 1931161 D 257310 CDS NP_888373.1 33600813 2663183 1932519..1933874 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1998; type II secretion system protein 1933874 2663183 BB1828 Bordetella bronchiseptica RB50 type II secretion system protein NP_888373.1 1932519 D 257310 CDS NP_888374.1 33600814 2663847 1933871..1934797 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1999; hypothetical protein 1934797 2663847 BB1829 Bordetella bronchiseptica RB50 hypothetical protein NP_888374.1 1933871 D 257310 CDS NP_888375.1 33600815 2662736 1934806..1935792 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2000; hypothetical protein 1935792 2662736 BB1830 Bordetella bronchiseptica RB50 hypothetical protein NP_888375.1 1934806 D 257310 CDS NP_888376.1 33600816 2663516 1935792..1936634 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2001; lipoprotein 1936634 2663516 BB1831 Bordetella bronchiseptica RB50 lipoprotein NP_888376.1 1935792 D 257310 CDS NP_888377.1 33600817 2663621 1936653..1937120 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2002; hypothetical protein 1937120 2663621 BB1832 Bordetella bronchiseptica RB50 hypothetical protein NP_888377.1 1936653 D 257310 CDS NP_888378.1 33600818 2662939 1937134..1939377 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2003; hypothetical protein 1939377 2662939 BB1833 Bordetella bronchiseptica RB50 hypothetical protein NP_888378.1 1937134 D 257310 CDS NP_888379.1 33600819 2663149 1939399..1940790 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2004; response regulator 1940790 2663149 BB1834 Bordetella bronchiseptica RB50 response regulator NP_888379.1 1939399 D 257310 CDS NP_888380.1 33600820 2662709 1940870..1941565 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2005; lipoprotein 1941565 2662709 BB1835 Bordetella bronchiseptica RB50 lipoprotein NP_888380.1 1940870 D 257310 CDS NP_888381.1 33600821 2662766 1941638..1942120 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2006; hypothetical protein 1942120 2662766 BB1836 Bordetella bronchiseptica RB50 hypothetical protein NP_888381.1 1941638 D 257310 CDS NP_888382.1 33600822 2663828 1942178..1942882 1 NC_002927.3 member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 1942882 2663828 BB1837 Bordetella bronchiseptica RB50 RNA polymerase sigma factor NP_888382.1 1942178 D 257310 CDS NP_888383.1 33600823 2663198 1943029..1943598 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2008; hypothetical protein 1943598 2663198 BB1838 Bordetella bronchiseptica RB50 hypothetical protein NP_888383.1 1943029 D 257310 CDS NP_888384.1 33600824 2663005 1943595..1944005 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2009; cytochrome c 1944005 2663005 BB1839 Bordetella bronchiseptica RB50 cytochrome c NP_888384.1 1943595 D 257310 CDS NP_888385.1 33600825 2662923 complement(1944173..1944730) 1 NC_002927.3 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 1944730 efp 2662923 efp Bordetella bronchiseptica RB50 elongation factor P NP_888385.1 1944173 R 257310 CDS NP_888386.1 33600826 2663454 complement(1944873..1945985) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2011; hypothetical protein 1945985 2663454 BB1841 Bordetella bronchiseptica RB50 hypothetical protein NP_888386.1 1944873 R 257310 CDS NP_888387.1 33600827 2662864 complement(1946001..1947203) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2012; hypothetical protein 1947203 2662864 BB1842 Bordetella bronchiseptica RB50 hypothetical protein NP_888387.1 1946001 R 257310 CDS NP_888388.1 33600828 2662708 1947310..1948149 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2013; hypothetical protein 1948149 2662708 BB1843 Bordetella bronchiseptica RB50 hypothetical protein NP_888388.1 1947310 D 257310 CDS NP_888389.1 33600829 2663140 complement(1948258..1950963) 1 NC_002927.3 catalyzes the conversion of citrate to isocitrate; aconitate hydratase 1950963 acnA 2663140 acnA Bordetella bronchiseptica RB50 aconitate hydratase NP_888389.1 1948258 R 257310 CDS NP_888390.1 33600830 2663130 complement(1951201..1951803) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2015; lipoprotein 1951803 2663130 BB1845 Bordetella bronchiseptica RB50 lipoprotein NP_888390.1 1951201 R 257310 CDS NP_888391.1 33600831 2663121 1952080..1954284 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2016; ferric siderophore receptor 1954284 brfB 2663121 brfB Bordetella bronchiseptica RB50 ferric siderophore receptor NP_888391.1 1952080 D 257310 CDS NP_888392.1 33600832 2662883 1954446..1955183 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2017; haloacid-type dehydrogenase 1955183 2662883 BB1847 Bordetella bronchiseptica RB50 haloacid-type dehydrogenase NP_888392.1 1954446 D 257310 CDS NP_888393.1 33600833 2662733 complement(1955189..1955791) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2019; lipoprotein 1955791 2662733 BB1848 Bordetella bronchiseptica RB50 lipoprotein NP_888393.1 1955189 R 257310 CDS NP_888394.1 33600834 2663279 complement(1955793..1956131) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2020; hypothetical protein 1956131 2663279 BB1849 Bordetella bronchiseptica RB50 hypothetical protein NP_888394.1 1955793 R 257310 CDS NP_888395.1 33600835 2662865 complement(1956526..1959117) 1 NC_002927.3 catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 1959117 acnB 2662865 acnB Bordetella bronchiseptica RB50 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase NP_888395.1 1956526 R 257310 CDS NP_888396.1 33600836 2662839 1959184..1959927 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2022; exonuclease 1959927 2662839 BB1851 Bordetella bronchiseptica RB50 exonuclease NP_888396.1 1959184 D 257310 CDS NP_888397.1 33600837 2663595 1959940..1960326 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2023; hypothetical protein 1960326 2663595 BB1852 Bordetella bronchiseptica RB50 hypothetical protein NP_888397.1 1959940 D 257310 CDS NP_888398.1 33600838 2662969 complement(1960333..1960623) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2024; hypothetical protein 1960623 2662969 BB1853 Bordetella bronchiseptica RB50 hypothetical protein NP_888398.1 1960333 R 257310 CDS NP_888399.1 33600839 2663555 1960759..1961058 1 NC_002927.3 unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity; YciI-like protein 1961058 2663555 BB1854 Bordetella bronchiseptica RB50 YciI-like protein NP_888399.1 1960759 D 257310 CDS NP_888400.1 33600840 2663865 1961127..1962029 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2026; integral membrane protein 1962029 2663865 BB1855 Bordetella bronchiseptica RB50 integral membrane protein NP_888400.1 1961127 D 257310 CDS NP_888401.1 33600841 2663058 1962033..1962803 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2027; integral membrane protein 1962803 2663058 BB1856 Bordetella bronchiseptica RB50 integral membrane protein NP_888401.1 1962033 D 257310 CDS NP_888402.1 33600842 2663266 1963189..1963638 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2028; hypothetical protein 1963638 2663266 BB1857 Bordetella bronchiseptica RB50 hypothetical protein NP_888402.1 1963189 D 257310 CDS NP_888403.1 33600843 2663824 1963694..1964257 1 NC_002927.3 hypothetical protein 1964257 2663824 BB1858 Bordetella bronchiseptica RB50 hypothetical protein NP_888403.1 1963694 D 257310 CDS NP_888404.1 33600844 2663077 complement(1964271..1966691) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2029A; hypothetical protein 1966691 2663077 BB1859 Bordetella bronchiseptica RB50 hypothetical protein NP_888404.1 1964271 R 257310 CDS NP_888405.1 33600845 2663822 complement(1966836..1967747) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2030; LysR family transcriptional regulator 1967747 2663822 BB1860 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_888405.1 1966836 R 257310 CDS NP_888406.1 33600846 2663503 1967973..1969490 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2031; acyl-CoA transferase 1969490 2663503 BB1861 Bordetella bronchiseptica RB50 acyl-CoA transferase NP_888406.1 1967973 D 257310 CDS NP_888407.1 33600847 2663585 complement(1969540..1970598) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2032; transmembrane transport protein 1970598 2663585 BB1862 Bordetella bronchiseptica RB50 transmembrane transport protein NP_888407.1 1969540 R 257310 CDS NP_888408.1 33600848 2663558 complement(1970720..1971682) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2034; LysR family transcriptional regulator 1971682 2663558 BB1863 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_888408.1 1970720 R 257310 CDS NP_888409.1 33600849 2663743 1979287..1982034 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2315; autotransporter 1982034 vag8 2663743 vag8 Bordetella bronchiseptica RB50 autotransporter NP_888409.1 1979287 D 257310 CDS NP_888410.1 33600850 2662920 complement(1982053..1982676) 1 NC_002927.3 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 1982676 maf 2662920 maf Bordetella bronchiseptica RB50 Maf-like protein NP_888410.1 1982053 R 257310 CDS NP_888411.1 33600851 2662737 complement(1982688..1983158) 1 NC_002927.3 SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 1983158 2662737 BB1866 Bordetella bronchiseptica RB50 rRNA large subunit methyltransferase NP_888411.1 1982688 R 257310 CDS NP_888412.1 33600852 2663684 complement(1983170..1983556) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2312; hypothetical protein 1983556 2663684 BB1867 Bordetella bronchiseptica RB50 hypothetical protein NP_888412.1 1983170 R 257310 CDS NP_888413.1 33600853 2662701 complement(1983619..1984206) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2311; nicotinate-nucleotide adenylyltransferase 1984206 nadD 2662701 nadD Bordetella bronchiseptica RB50 nicotinate-nucleotide adenylyltransferase NP_888413.1 1983619 R 257310 CDS NP_888414.1 33600854 2663574 complement(1984203..1985114) 1 NC_002927.3 catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase 1985114 hemF 2663574 hemF Bordetella bronchiseptica RB50 coproporphyrinogen III oxidase NP_888414.1 1984203 R 257310 CDS NP_888415.1 33600855 2663399 complement(1985130..1986503) 1 NC_002927.3 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 1986503 purD 2663399 purD Bordetella bronchiseptica RB50 phosphoribosylamine--glycine ligase NP_888415.1 1985130 R 257310 CDS NP_888416.1 33600856 2663821 complement(1986538..1987269) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2308; hypothetical protein 1987269 2663821 BB1871 Bordetella bronchiseptica RB50 hypothetical protein NP_888416.1 1986538 R 257310 CDS NP_888417.1 33600857 2663781 1987346..1988944 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2307; ATP-binding protein 1988944 2663781 BB1872 Bordetella bronchiseptica RB50 ATP-binding protein NP_888417.1 1987346 D 257310 CDS NP_888418.1 33600858 2663409 complement(1989014..1990384) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2305; aminotransferase 1990384 2663409 BB1873 Bordetella bronchiseptica RB50 aminotransferase NP_888418.1 1989014 R 257310 CDS NP_888419.1 33600859 2663586 1990521..1991453 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2304; 2-hydroxyacid dehydrogenase 1991453 2663586 BB1874 Bordetella bronchiseptica RB50 2-hydroxyacid dehydrogenase NP_888419.1 1990521 D 257310 CDS NP_888420.1 33600860 2663501 complement(1991464..1992957) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2303; aldehyde dehydrogenase 1992957 2663501 BB1875 Bordetella bronchiseptica RB50 aldehyde dehydrogenase NP_888420.1 1991464 R 257310 CDS NP_888421.1 33600861 2663859 complement(1992954..1993877) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2302; hypothetical protein 1993877 2663859 BB1876 Bordetella bronchiseptica RB50 hypothetical protein NP_888421.1 1992954 R 257310 CDS NP_888422.1 33600862 2663734 complement(1993880..1995142) 1 NC_002927.3 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase 1995142 2663734 BB1877 Bordetella bronchiseptica RB50 allantoate amidohydrolase NP_888422.1 1993880 R 257310 CDS NP_888423.1 33600863 2659974 complement(1995162..1996226) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2300; acetylpolyamine aminohydrolase 1996226 2659974 BB1878 Bordetella bronchiseptica RB50 acetylpolyamine aminohydrolase NP_888423.1 1995162 R 257310 CDS NP_888424.1 33600864 2661497 complement(1996249..1996572) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2299; hypothetical protein 1996572 2661497 BB1879 Bordetella bronchiseptica RB50 hypothetical protein NP_888424.1 1996249 R 257310 CDS NP_888425.1 33600865 2661498 complement(1996569..1997843) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2298; aminobutyrate aminotransferase 1997843 2661498 BB1880 Bordetella bronchiseptica RB50 aminobutyrate aminotransferase NP_888425.1 1996569 R 257310 CDS NP_888426.1 33600866 2661581 complement(1997884..1999521) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2296; ABC transporter ATP-binding protein 1999521 2661581 BB1881 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_888426.1 1997884 R 257310 CDS NP_888427.1 33600867 2660886 complement(1999526..2000365) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2295; integral membrane transport protein 2000365 2660886 BB1882 Bordetella bronchiseptica RB50 integral membrane transport protein NP_888427.1 1999526 R 257310 CDS NP_888428.1 33600868 2660855 complement(2000362..2001378) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2294; integral membrane transport protein 2001378 2660855 BB1883 Bordetella bronchiseptica RB50 integral membrane transport protein NP_888428.1 2000362 R 257310 CDS NP_888429.1 33600869 2660348 complement(2001486..2003060) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2293; ABC transporter substrate-binding protein 2003060 2660348 BB1884 Bordetella bronchiseptica RB50 ABC transporter substrate-binding protein NP_888429.1 2001486 R 257310 CDS NP_888430.1 33600870 2661542 2003480..2005024 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2292; transcriptional regulator 2005024 2661542 BB1885 Bordetella bronchiseptica RB50 transcriptional regulator NP_888430.1 2003480 D 257310 CDS NP_888431.1 33600871 2662604 2005129..2006196 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2291; tartrate dehydrogenase 2006196 2662604 BB1886 Bordetella bronchiseptica RB50 tartrate dehydrogenase NP_888431.1 2005129 D 257310 CDS NP_888432.1 33600872 2662631 complement(2006215..2007801) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2290; multidrug resistance protein 2007801 2662631 BB1887 Bordetella bronchiseptica RB50 multidrug resistance protein NP_888432.1 2006215 R 257310 CDS NP_888433.1 33600873 2661449 complement(2007798..2009012) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2289; multidrug resistance protein 2009012 2661449 BB1888 Bordetella bronchiseptica RB50 multidrug resistance protein NP_888433.1 2007798 R 257310 CDS NP_888434.1 33600874 2661342 complement(2009009..2010430) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2287; outer membrane protein 2010430 2661342 BB1889 Bordetella bronchiseptica RB50 outer membrane protein NP_888434.1 2009009 R 257310 CDS NP_888435.1 33600875 2659952 complement(2010554..2011042) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2286; MarR family transcriptional regulator 2011042 2659952 BB1890 Bordetella bronchiseptica RB50 MarR family transcriptional regulator NP_888435.1 2010554 R 257310 CDS NP_888436.1 33600876 2661362 complement(2011102..2011959) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2285; hypothetical protein 2011959 2661362 BB1891 Bordetella bronchiseptica RB50 hypothetical protein NP_888436.1 2011102 R 257310 CDS NP_888437.1 33600877 2661517 2012022..2012972 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2284; hypothetical protein 2012972 2661517 BB1892 Bordetella bronchiseptica RB50 hypothetical protein NP_888437.1 2012022 D 257310 CDS NP_888438.1 33600878 2660551 2013035..2014024 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2283; quinone oxidoreductase 2014024 qor 2660551 qor Bordetella bronchiseptica RB50 quinone oxidoreductase NP_888438.1 2013035 D 257310 CDS NP_888439.1 33600879 2660867 complement(2014100..2014981) 1 NC_002927.3 metalloprotease; heat shock protein HtpX 2014981 2660867 BB1894 Bordetella bronchiseptica RB50 heat shock protein HtpX NP_888439.1 2014100 R 257310 CDS NP_888440.1 33600880 2661622 2015135..2015989 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2281; integral membrane protein 2015989 2661622 BB1895 Bordetella bronchiseptica RB50 integral membrane protein NP_888440.1 2015135 D 257310 CDS NP_888441.1 33600881 2659828 2016042..2016893 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2280; sulfurtransferase 2016893 2659828 BB1896 Bordetella bronchiseptica RB50 sulfurtransferase NP_888441.1 2016042 D 257310 CDS NP_888442.1 33600882 2660369 complement(2016910..2017479) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2279; hypothetical protein 2017479 2660369 BB1897 Bordetella bronchiseptica RB50 hypothetical protein NP_888442.1 2016910 R 257310 CDS NP_888443.1 33600883 2660947 complement(2017510..2018340) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2278; transcriptional regulator 2018340 2660947 BB1898 Bordetella bronchiseptica RB50 transcriptional regulator NP_888443.1 2017510 R 257310 CDS NP_888444.1 33600884 2660647 2018533..2019609 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2277; ABC transporter ATP-binding protein 2019609 2660647 BB1899 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_888444.1 2018533 D 257310 CDS NP_888445.1 33600885 2660364 2019674..2021368 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2276; ABC transporter permease 2021368 2660364 BB1900 Bordetella bronchiseptica RB50 ABC transporter permease NP_888445.1 2019674 D 257310 CDS NP_888446.1 33600886 2662622 2021385..2022215 1 NC_002927.3 catalyzes the degradation of phosphonoacetaldehyde to acetaldehyde and phosphate; phosphonoacetaldehyde hydrolase 2022215 2662622 BB1901 Bordetella bronchiseptica RB50 phosphonoacetaldehyde hydrolase NP_888446.1 2021385 D 257310 CDS NP_888447.1 33600887 2661505 2022244..2023266 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2274; hypothetical protein 2023266 2661505 BB1902 Bordetella bronchiseptica RB50 hypothetical protein NP_888447.1 2022244 D 257310 CDS NP_888448.1 33600888 2661503 2023331..2024458 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2273; secreted oxidoreductase 2024458 2661503 BB1903 Bordetella bronchiseptica RB50 secreted oxidoreductase NP_888448.1 2023331 D 257310 CDS NP_888449.1 33600889 2661559 complement(2024678..2025211) 1 NC_002927.3 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 2025211 2661559 BB1904 Bordetella bronchiseptica RB50 RNA polymerase sigma factor NP_888449.1 2024678 R 257310 CDS NP_888450.1 33600890 2661548 2025420..2028362 1 NC_002927.3 TonB-dependent receptor 2028362 2661548 BB1905 Bordetella bronchiseptica RB50 TonB-dependent receptor NP_888450.1 2025420 D 257310 CDS NP_888451.1 33600891 2661593 complement(2028427..2029719) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2804; iron-sulfur protein 2029719 2661593 BB1906 Bordetella bronchiseptica RB50 iron-sulfur protein NP_888451.1 2028427 R 257310 CDS NP_888452.1 33600892 2660317 complement(2029726..2030736) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2803; integral membrane protein 2030736 2660317 BB1907 Bordetella bronchiseptica RB50 integral membrane protein NP_888452.1 2029726 R 257310 CDS NP_888453.1 33600893 2661579 complement(2030907..2031872) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2802; hypothetical protein 2031872 2661579 BB1908 Bordetella bronchiseptica RB50 hypothetical protein NP_888453.1 2030907 R 257310 CDS NP_888454.1 33600894 2661616 2031990..2032877 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2801; transcriptional regulator 2032877 2661616 BB1909 Bordetella bronchiseptica RB50 transcriptional regulator NP_888454.1 2031990 D 257310 CDS NP_888455.1 33600895 2660586 2032964..2033230 1 NC_002927.3 catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit 2033230 xseB 2660586 xseB Bordetella bronchiseptica RB50 exodeoxyribonuclease VII small subunit NP_888455.1 2032964 D 257310 CDS NP_888456.1 33600896 2660948 2033235..2034146 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2799; geranyltranstransferase 2034146 2660948 BB1911 Bordetella bronchiseptica RB50 geranyltranstransferase NP_888456.1 2033235 D 257310 CDS NP_888457.1 33600897 2660472 2034196..2036058 1 NC_002927.3 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 2036058 dxs 2660472 dxs Bordetella bronchiseptica RB50 1-deoxy-D-xylulose-5-phosphate synthase NP_888457.1 2034196 D 257310 CDS NP_888458.1 33600898 2661835 2036215..2037012 1 NC_002927.3 similar protein in Methanocaldococcus converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate as the first step in methanopterin biosynthesis; GTP cyclohydrolase 2037012 2661835 BB1913 Bordetella bronchiseptica RB50 GTP cyclohydrolase NP_888458.1 2036215 D 257310 CDS NP_888459.2 161609278 2660439 2037236..2037616 1 NC_002927.3 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 2037616 rpsF 2660439 rpsF Bordetella bronchiseptica RB50 30S ribosomal protein S6 NP_888459.2 2037236 D 257310 CDS NP_888460.1 33600900 2660690 2037664..2037987 1 NC_002927.3 binds single-stranded DNA at the primosome assembly site; primosomal replication protein N 2037987 priB 2660690 priB Bordetella bronchiseptica RB50 primosomal replication protein N NP_888460.1 2037664 D 257310 CDS NP_888461.1 33600901 2660691 2038080..2038352 1 NC_002927.3 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 2038352 rpsR 2660691 rpsR Bordetella bronchiseptica RB50 30S ribosomal protein S18 NP_888461.1 2038080 D 257310 CDS NP_888462.1 33600902 2660557 2038368..2038823 1 NC_002927.3 in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 2038823 rplI 2660557 rplI Bordetella bronchiseptica RB50 50S ribosomal protein L9 NP_888462.1 2038368 D 257310 CDS NP_888463.1 33600903 2660512 2038940..2039776 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2792; hypothetical protein 2039776 2660512 BB1918 Bordetella bronchiseptica RB50 hypothetical protein NP_888463.1 2038940 D 257310 CDS NP_888464.1 33600904 2660474 2039773..2041146 1 NC_002927.3 unwinds double stranded DNA; replicative DNA helicase 2041146 dnaB 2660474 dnaB Bordetella bronchiseptica RB50 replicative DNA helicase NP_888464.1 2039773 D 257310 CDS NP_888465.1 33600905 2661415 complement(2041167..2042135) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2790; hypothetical protein 2042135 2661415 BB1920 Bordetella bronchiseptica RB50 hypothetical protein NP_888465.1 2041167 R 257310 CDS NP_888466.1 33600906 2661366 complement(2042215..2043192) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2789; hypothetical protein 2043192 2661366 BB1921 Bordetella bronchiseptica RB50 hypothetical protein NP_888466.1 2042215 R 257310 CDS NP_888467.1 33600907 2660734 complement(2043297..2044976) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2788; hypothetical protein 2044976 2660734 BB1922 Bordetella bronchiseptica RB50 hypothetical protein NP_888467.1 2043297 R 257310 CDS NP_888468.1 33600908 2660794 complement(2045034..2045498) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2787; hypothetical protein 2045498 2660794 BB1923 Bordetella bronchiseptica RB50 hypothetical protein NP_888468.1 2045034 R 257310 CDS NP_888469.1 33600909 2660322 complement(2045501..2045953) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2786; hypothetical protein 2045953 2660322 BB1924 Bordetella bronchiseptica RB50 hypothetical protein NP_888469.1 2045501 R 257310 CDS NP_888470.1 33600910 2660537 2046050..2047357 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2785; aminotransferase 2047357 2660537 BB1925 Bordetella bronchiseptica RB50 aminotransferase NP_888470.1 2046050 D 257310 CDS NP_888471.1 33600911 2660528 2047354..2048658 1 NC_002927.3 catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 2048658 2660528 BB1926 Bordetella bronchiseptica RB50 homoserine dehydrogenase NP_888471.1 2047354 D 257310 CDS NP_888472.1 33600912 2660608 2048655..2050061 1 NC_002927.3 catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 2050061 thrC 2660608 thrC Bordetella bronchiseptica RB50 threonine synthase NP_888472.1 2048655 D 257310 CDS NP_888473.1 33600913 2660657 2050275..2050496 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2782; lipoprotein 2050496 2660657 BB1928 Bordetella bronchiseptica RB50 lipoprotein NP_888473.1 2050275 D 257310 CDS NP_888474.1 33600914 2660720 complement(2050603..2051622) 1 NC_002927.3 catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase 2051622 fbp 2660720 fbp Bordetella bronchiseptica RB50 fructose-1,6-bisphosphatase NP_888474.1 2050603 R 257310 CDS NP_888475.1 33600915 2660771 complement(2051632..2054340) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0869; aminopeptidase N 2054340 pepN 2660771 pepN Bordetella bronchiseptica RB50 aminopeptidase N NP_888475.1 2051632 R 257310 CDS NP_888476.1 33600916 2659978 2054488..2055126 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0870; hypothetical protein 2055126 2659978 BB1931 Bordetella bronchiseptica RB50 hypothetical protein NP_888476.1 2054488 D 257310 CDS NP_888477.1 33600917 2661394 complement(2055225..2055596) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) bph3; DNA-binding protein (histone) 2055596 bph3 2661394 bph3 Bordetella bronchiseptica RB50 DNA-binding protein (histone) NP_888477.1 2055225 R 257310 CDS NP_888478.1 33600918 2661395 2055721..2056551 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2910; hydrolase 2056551 2661395 BB1933 Bordetella bronchiseptica RB50 hydrolase NP_888478.1 2055721 D 257310 CDS NP_888479.1 33600919 2661407 2056562..2058022 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2909; hypothetical protein 2058022 2661407 BB1934 Bordetella bronchiseptica RB50 hypothetical protein NP_888479.1 2056562 D 257310 CDS NP_888480.1 33600920 2661424 2058279..2059352 1 NC_002927.3 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 2059352 aroG 2661424 aroG Bordetella bronchiseptica RB50 phospho-2-dehydro-3-deoxyheptonate aldolase NP_888480.1 2058279 D 257310 CDS NP_888481.1 33600921 2661608 complement(2059374..2072030) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2907; adhesin 2072030 fhaL 2661608 fhaL Bordetella bronchiseptica RB50 adhesin NP_888481.1 2059374 R 257310 CDS NP_888482.1 33600922 2659536 2072160..2073569 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2906; oxidoreductase 2073569 2659536 BB1937 Bordetella bronchiseptica RB50 oxidoreductase NP_888482.1 2072160 D 257310 CDS NP_888483.1 33600923 2659598 2073704..2075203 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2905; glycolate oxidase subunit 2075203 glcD 2659598 glcD Bordetella bronchiseptica RB50 glycolate oxidase subunit NP_888483.1 2073704 D 257310 CDS NP_888484.1 33600924 2660807 2075215..2076324 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2904; glycolate oxidase FAD binding subunit 2076324 glcE 2660807 glcE Bordetella bronchiseptica RB50 glycolate oxidase FAD binding subunit NP_888484.1 2075215 D 257310 CDS NP_888485.1 33600925 2660818 2076357..2077586 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2903; glycolate oxidase iron-sulfur subunit 2077586 glcF 2660818 glcF Bordetella bronchiseptica RB50 glycolate oxidase iron-sulfur subunit NP_888485.1 2076357 D 257310 CDS NP_888486.1 33600926 2661462 complement(2077577..2078488) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2902; hypothetical protein 2078488 2661462 BB1941 Bordetella bronchiseptica RB50 hypothetical protein NP_888486.1 2077577 R 257310 CDS NP_888487.2 229220826 2661564 complement(2078491..2080704) 1 NC_002927.3 Fep; Cbt; Cbr; FeuB; FepA; PfeA; IroN; BfeA; outer membrane receptor of ferric enterobactin and colicins B and D; interacts with the TonB-ExbBD complex which catalyzes the translocation of the siderophore to the periplasmic space; outer membrane receptor FepA 2080704 bfeA 2661564 bfeA Bordetella bronchiseptica RB50 outer membrane receptor FepA NP_888487.2 2078491 R 257310 CDS NP_888488.1 33600928 2659933 2080880..2081890 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2900; transcriptional regulator 2081890 2659933 BB1943 Bordetella bronchiseptica RB50 transcriptional regulator NP_888488.1 2080880 D 257310 CDS NP_888489.1 33600929 2660584 complement(2081934..2083370) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2899; NAD(P) transhydrogenase subunit beta 2083370 pntB 2660584 pntB Bordetella bronchiseptica RB50 NAD(P) transhydrogenase subunit beta NP_888489.1 2081934 R 257310 CDS NP_888490.1 33600930 2660864 complement(2083367..2083684) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2898; NAD(P) transhydrogenase subunit alpha part 2 2083684 pntAB 2660864 pntAB Bordetella bronchiseptica RB50 NAD(P) transhydrogenase subunit alpha part 2 NP_888490.1 2083367 R 257310 CDS NP_888491.1 33600931 2660905 complement(2083686..2084804) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2897; NAD(P) transhydrogenase subunit alpha part 1 2084804 pntaA 2660905 pntaA Bordetella bronchiseptica RB50 NAD(P) transhydrogenase subunit alpha part 1 NP_888491.1 2083686 R 257310 CDS NP_888492.1 33600932 2659584 complement(2085059..2085934) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2896; hydrolase 2085934 2659584 BB1947 Bordetella bronchiseptica RB50 hydrolase NP_888492.1 2085059 R 257310 CDS NP_888493.1 33600933 2659585 complement(2085994..2086980) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2895; hypothetical protein 2086980 2659585 BB1948 Bordetella bronchiseptica RB50 hypothetical protein NP_888493.1 2085994 R 257310 CDS NP_888494.1 33600934 2660511 2087152..2088072 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2894; LysR family transcriptional regulator 2088072 2660511 BB1949 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_888494.1 2087152 D 257310 CDS NP_888495.1 33600935 2661114 2088085..2089200 1 NC_002927.3 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 2089200 mnmA 2661114 mnmA Bordetella bronchiseptica RB50 tRNA-specific 2-thiouridylase MnmA NP_888495.1 2088085 D 257310 CDS NP_888496.1 33600936 2661064 2089301..2090119 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2892; integral membrane protein 2090119 2661064 BB1951 Bordetella bronchiseptica RB50 integral membrane protein NP_888496.1 2089301 D 257310 CDS NP_888497.1 33600937 2661067 complement(2090217..2090828) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2891; hypothetical protein 2090828 2661067 BB1952 Bordetella bronchiseptica RB50 hypothetical protein NP_888497.1 2090217 R 257310 CDS NP_888498.1 33600938 2662109 2090943..2092364 1 NC_002927.3 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 2092364 purB 2662109 purB Bordetella bronchiseptica RB50 adenylosuccinate lyase NP_888498.1 2090943 D 257310 CDS NP_888499.1 33600939 2659718 2092427..2092885 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2889; c'cytochrome 2092885 2659718 BB1954 Bordetella bronchiseptica RB50 c'cytochrome NP_888499.1 2092427 D 257310 CDS NP_888500.1 33600940 2659373 complement(2092970..2093665) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2888; integral membrane protein 2093665 2659373 BB1955 Bordetella bronchiseptica RB50 integral membrane protein NP_888500.1 2092970 R 257310 CDS NP_888501.1 33600941 2660044 complement(2093727..2094008) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2887; hypothetical protein 2094008 2660044 BB1956 Bordetella bronchiseptica RB50 hypothetical protein NP_888501.1 2093727 R 257310 CDS NP_888502.1 33600942 2660045 2094520..2095323 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2886; lipoprotein 2095323 2660045 BB1957 Bordetella bronchiseptica RB50 lipoprotein NP_888502.1 2094520 D 257310 CDS NP_888503.1 33600943 2660298 2095368..2096444 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2885; hypothetical protein 2096444 2660298 BB1958 Bordetella bronchiseptica RB50 hypothetical protein NP_888503.1 2095368 D 257310 CDS NP_888504.1 33600944 2661841 2096526..2097173 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3506; hypothetical protein 2097173 2661841 BB1959 Bordetella bronchiseptica RB50 hypothetical protein NP_888504.1 2096526 D 257310 CDS NP_888505.1 33600945 2660666 complement(2097188..2098615) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3507; hypothetical protein 2098615 2660666 BB1960 Bordetella bronchiseptica RB50 hypothetical protein NP_888505.1 2097188 R 257310 CDS NP_888506.1 33600946 2660318 complement(2098781..2099386) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3508; hypothetical protein 2099386 2660318 BB1961 Bordetella bronchiseptica RB50 hypothetical protein NP_888506.1 2098781 R 257310 CDS NP_888507.1 33600947 2659765 2099422..2099745 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3509; hypothetical protein 2099745 2659765 BB1962 Bordetella bronchiseptica RB50 hypothetical protein NP_888507.1 2099422 D 257310 CDS NP_888508.1 33600948 2659766 complement(2099767..2100033) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3511; hypothetical protein 2100033 2659766 BB1963 Bordetella bronchiseptica RB50 hypothetical protein NP_888508.1 2099767 R 257310 CDS NP_888509.1 33600949 2663895 2100363..2100599 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3512; hypothetical protein 2100599 2663895 BB1964 Bordetella bronchiseptica RB50 hypothetical protein NP_888509.1 2100363 D 257310 CDS NP_888510.1 33600950 2663896 2100616..2100873 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3513; hypothetical protein 2100873 2663896 BB1965 Bordetella bronchiseptica RB50 hypothetical protein NP_888510.1 2100616 D 257310 CDS NP_888511.1 33600951 2661166 complement(2101145..2102470) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3514; hypothetical protein 2102470 2661166 BB1966 Bordetella bronchiseptica RB50 hypothetical protein NP_888511.1 2101145 R 257310 CDS NP_888512.1 33600952 2658989 complement(2102492..2103466) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3515; hypothetical protein 2103466 2658989 BB1967 Bordetella bronchiseptica RB50 hypothetical protein NP_888512.1 2102492 R 257310 CDS NP_888513.1 33600953 2662024 2103798..2104397 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3517; hypothetical protein 2104397 2662024 BB1968 Bordetella bronchiseptica RB50 hypothetical protein NP_888513.1 2103798 D 257310 CDS NP_888514.1 33600954 2661952 2104385..2105815 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3518; phospholipase D 2105815 2661952 BB1969 Bordetella bronchiseptica RB50 phospholipase D NP_888514.1 2104385 D 257310 CDS NP_888515.1 33600955 2661059 complement(2105825..2107486) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3521; hypothetical protein 2107486 2661059 BB1970 Bordetella bronchiseptica RB50 hypothetical protein NP_888515.1 2105825 R 257310 CDS NP_888516.1 33600956 2661094 complement(2107561..2108868) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3522; hypothetical protein 2108868 2661094 BB1971 Bordetella bronchiseptica RB50 hypothetical protein NP_888516.1 2107561 R 257310 CDS NP_888517.1 33600957 2660397 complement(2108929..2109876) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3523; hypothetical protein 2109876 2660397 BB1972 Bordetella bronchiseptica RB50 hypothetical protein NP_888517.1 2108929 R 257310 CDS NP_888518.1 33600958 2661115 2110001..2110444 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3524; acetyltransferase 2110444 2661115 BB1973 Bordetella bronchiseptica RB50 acetyltransferase NP_888518.1 2110001 D 257310 CDS NP_888519.1 33600959 2659648 2110784..2111395 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3525; hypothetical protein 2111395 2659648 BB1974 Bordetella bronchiseptica RB50 hypothetical protein NP_888519.1 2110784 D 257310 CDS NP_888520.1 33600960 2661496 2111957..2114377 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3526; ribonuclease R 2114377 rnr 2661496 rnr Bordetella bronchiseptica RB50 ribonuclease R NP_888520.1 2111957 D 257310 CDS NP_888521.1 33600961 2661484 2114502..2115239 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3527; tRNA/rRNA methyltransferase 2115239 2661484 BB1976 Bordetella bronchiseptica RB50 tRNA/rRNA methyltransferase NP_888521.1 2114502 D 257310 CDS NP_888522.1 33600962 2659134 2115293..2116537 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3528; hypothetical protein 2116537 2659134 BB1977 Bordetella bronchiseptica RB50 hypothetical protein NP_888522.1 2115293 D 257310 CDS NP_888523.1 33600963 2661621 2116578..2117258 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3529; hydroxylase 2117258 2661621 BB1978 Bordetella bronchiseptica RB50 hydroxylase NP_888523.1 2116578 D 257310 CDS NP_888524.1 33600964 2659071 2117579..2117851 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3530; DNA-binding protein HU-beta 2117851 hupB 2659071 hupB Bordetella bronchiseptica RB50 DNA-binding protein HU-beta NP_888524.1 2117579 D 257310 CDS NP_888525.1 33600965 2663930 2118348..2119154 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3531; siderophore-mediated iron transport protein 2119154 tonB 2663930 tonB Bordetella bronchiseptica RB50 siderophore-mediated iron transport protein NP_888525.1 2118348 D 257310 CDS NP_888526.1 33600966 2660730 2119156..2120133 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3532; MotA/TolQ/ExbB proton channel family protein 2120133 exbB 2660730 exbB Bordetella bronchiseptica RB50 MotA/TolQ/ExbB proton channel family protein NP_888526.1 2119156 D 257310 CDS NP_888527.1 33600967 2660552 2120133..2120600 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3533; biopolymer transport protein ExbD/TolR 2120600 exbD 2660552 exbD Bordetella bronchiseptica RB50 biopolymer transport protein ExbD/TolR NP_888527.1 2120133 D 257310 CDS NP_888528.1 33600968 2660587 2120683..2121354 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3534; response regulator protein 2121354 basR 2660587 basR Bordetella bronchiseptica RB50 response regulator protein NP_888528.1 2120683 D 257310 CDS NP_888529.1 33600969 2660834 2121413..2122531 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3535; sensor kinase 2122531 2660834 BB1984 Bordetella bronchiseptica RB50 sensor kinase NP_888529.1 2121413 D 257310 CDS NP_888530.1 33600970 2661103 2122528..2124438 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3536; potassium uptake protein 2124438 kup 2661103 kup Bordetella bronchiseptica RB50 potassium uptake protein NP_888530.1 2122528 D 257310 CDS NP_888531.1 33600971 2661205 complement(2124523..2125860) 1 NC_002927.3 catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis; argininosuccinate synthase 2125860 argG 2661205 argG Bordetella bronchiseptica RB50 argininosuccinate synthase NP_888531.1 2124523 R 257310 CDS NP_888532.1 33600972 2659266 complement(2126011..2126952) 1 NC_002927.3 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 2126952 argF 2659266 argF Bordetella bronchiseptica RB50 ornithine carbamoyltransferase NP_888532.1 2126011 R 257310 CDS NP_888533.1 33600973 2661768 complement(2127004..2128185) 1 NC_002927.3 catalyzes the formation of N-acetyl-l-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine aminotransferase 2128185 argD 2661768 argD Bordetella bronchiseptica RB50 acetylornithine aminotransferase NP_888533.1 2127004 R 257310 CDS NP_888534.1 33600974 2659060 2128396..2128686 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3540; hypothetical protein 2128686 2659060 BB1989 Bordetella bronchiseptica RB50 hypothetical protein NP_888534.1 2128396 D 257310 CDS NP_888535.1 33600975 2659061 complement(2128691..2129599) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3541; LysR family transcriptional regulator 2129599 2659061 BB1990 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_888535.1 2128691 R 257310 CDS NP_888536.1 33600976 2662208 complement(2129663..2130436) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3542; short chain dehydrogenase 2130436 2662208 BB1991 Bordetella bronchiseptica RB50 short chain dehydrogenase NP_888536.1 2129663 R 257310 CDS NP_888537.1 33600977 2659174 complement(2130583..2131536) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3543; D-isomer specific 2-hydroxyacid dehydrogenase 2131536 2659174 BB1992 Bordetella bronchiseptica RB50 D-isomer specific 2-hydroxyacid dehydrogenase NP_888537.1 2130583 R 257310 CDS NP_888538.1 33600978 2658972 complement(2131639..2132610) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3544; lipoprotein 2132610 2658972 BB1993 Bordetella bronchiseptica RB50 lipoprotein NP_888538.1 2131639 R 257310 CDS NP_888539.1 33600979 2661944 complement(2132692..2132883) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3545; hypothetical protein 2132883 2661944 BB1994 Bordetella bronchiseptica RB50 hypothetical protein NP_888539.1 2132692 R 257310 CDS NP_888540.1 33600980 2661945 2133092..2134009 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3546; hypothetical protein 2134009 2661945 BB1995 Bordetella bronchiseptica RB50 hypothetical protein NP_888540.1 2133092 D 257310 CDS NP_888541.1 33600981 2661471 2134072..2134842 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3547; GntR family transcriptional regulator 2134842 2661471 BB1996 Bordetella bronchiseptica RB50 GntR family transcriptional regulator NP_888541.1 2134072 D 257310 CDS NP_888542.1 33600982 2661461 2134899..2136011 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2780; malate dehydrogenase 2136011 2661461 BB1997 Bordetella bronchiseptica RB50 malate dehydrogenase NP_888542.1 2134899 D 257310 CDS NP_888543.1 33600983 2661458 2136060..2137805 1 NC_002927.3 catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; dihydroxy-acid dehydratase 2137805 2661458 BB1998 Bordetella bronchiseptica RB50 dihydroxy-acid dehydratase NP_888543.1 2136060 D 257310 CDS NP_888544.1 33600984 2659903 2137851..2138840 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2775; hypothetical protein 2138840 2659903 BB1999 Bordetella bronchiseptica RB50 hypothetical protein NP_888544.1 2137851 D 257310 CDS NP_888545.1 33600985 2661231 2138891..2139667 1 NC_002927.3 cleaves 5-dehydro-4-deoxy-glucarate and 2-dehydro-3-deoxy-D-glucarate; alpha-dehydro-beta-deoxy-D-glucarate aldolase 2139667 2661231 BB2000 Bordetella bronchiseptica RB50 alpha-dehydro-beta-deoxy-D-glucarate aldolase NP_888545.1 2138891 D 257310 CDS NP_888546.1 33600986 2660344 complement(2139785..2140048) 1 NC_002927.3 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 2140048 rpsT 2660344 rpsT Bordetella bronchiseptica RB50 30S ribosomal protein S20 NP_888546.1 2139785 R 257310 CDS NP_888547.1 33600987 2661472 complement(2140149..2141153) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2772; hypothetical protein 2141153 2661472 BB2002 Bordetella bronchiseptica RB50 hypothetical protein NP_888547.1 2140149 R 257310 CDS NP_888548.1 33600988 2660026 complement(2141363..2142955) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2771; integral membrane protein 2142955 2660026 BB2003 Bordetella bronchiseptica RB50 integral membrane protein NP_888548.1 2141363 R 257310 CDS NP_888549.1 33600989 2661445 complement(2142981..2143739) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2770; short-chain dehydrogenase 2143739 2661445 BB2004 Bordetella bronchiseptica RB50 short-chain dehydrogenase NP_888549.1 2142981 R 257310 CDS NP_888550.1 33600990 2660718 complement(2143831..2144487) 1 NC_002927.3 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 2144487 adk 2660718 adk Bordetella bronchiseptica RB50 adenylate kinase NP_888550.1 2143831 R 257310 CDS NP_888551.1 33600991 2659609 complement(2144578..2145342) 1 NC_002927.3 CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase 2145342 2659609 BB2006 Bordetella bronchiseptica RB50 3-deoxy-manno-octulosonate cytidylyltransferase NP_888551.1 2144578 R 257310 CDS NP_888552.1 33600992 2660704 complement(2145352..2145540) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2767; hypothetical protein 2145540 2660704 BB2007 Bordetella bronchiseptica RB50 hypothetical protein NP_888552.1 2145352 R 257310 CDS NP_888553.1 33600993 2660736 complement(2145596..2146639) 1 NC_002927.3 transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase 2146639 lpxK 2660736 lpxK Bordetella bronchiseptica RB50 tetraacyldisaccharide 4'-kinase NP_888553.1 2145596 R 257310 CDS NP_888554.1 33600994 2660302 complement(2146636..2147049) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2765; biopolymer transport protein 2147049 2660302 BB2009 Bordetella bronchiseptica RB50 biopolymer transport protein NP_888554.1 2146636 R 257310 CDS NP_888555.1 33600995 2660314 complement(2147046..2147666) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2764; biopolymer transport protein 2147666 2660314 BB2010 Bordetella bronchiseptica RB50 biopolymer transport protein NP_888555.1 2147046 R 257310 CDS NP_888556.1 33600996 2659970 2148016..2149407 1 NC_002927.3 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 2149407 xseA 2659970 xseA Bordetella bronchiseptica RB50 exodeoxyribonuclease VII large subunit NP_888556.1 2148016 D 257310 CDS NP_888557.1 33600997 2660687 2149480..2150058 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2761; superoxide dismutase 2150058 sodB 2660687 sodB Bordetella bronchiseptica RB50 superoxide dismutase NP_888557.1 2149480 D 257310 CDS NP_888558.1 33600998 2661825 2151689..2152894 1 NC_002927.3 catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA; beta-ketoadipyl CoA thiolase 2152894 2661825 BB2014 Bordetella bronchiseptica RB50 beta-ketoadipyl CoA thiolase NP_888558.1 2151689 D 257310 CDS NP_888559.1 33600999 2659565 complement(2152994..2153512) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2758; hypothetical protein 2153512 2659565 BB2015 Bordetella bronchiseptica RB50 hypothetical protein NP_888559.1 2152994 R 257310 CDS NP_888560.1 33601000 2662591 complement(2153607..2153852) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2757; cold-shock protein 2153852 2662591 BB2016 Bordetella bronchiseptica RB50 cold-shock protein NP_888560.1 2153607 R 257310 CDS NP_888561.1 33601001 2661953 2154080..2154394 1 NC_002927.3 involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA; ATP-dependent Clp protease adaptor protein ClpS 2154394 clpS 2661953 clpS Bordetella bronchiseptica RB50 ATP-dependent Clp protease adaptor protein ClpS NP_888561.1 2154080 D 257310 CDS NP_888562.1 33601002 2661305 2154493..2159673 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2755; hypothetical protein 2159673 2661305 BB2018 Bordetella bronchiseptica RB50 hypothetical protein NP_888562.1 2154493 D 257310 CDS NP_888563.1 33601003 2661014 2159670..2161838 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2754; penicillin-binding protein 2161838 pbp 2661014 pbp Bordetella bronchiseptica RB50 penicillin-binding protein NP_888563.1 2159670 D 257310 CDS NP_888564.1 33601004 2661120 2161858..2164206 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2753; ATP-dependent Clp protease ATP-binding 2164206 clpA 2661120 clpA Bordetella bronchiseptica RB50 ATP-dependent Clp protease ATP-binding NP_888564.1 2161858 D 257310 CDS NP_888565.1 33601005 2660782 2164211..2165530 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2752; hypothetical protein 2165530 2660782 BB2021 Bordetella bronchiseptica RB50 hypothetical protein NP_888565.1 2164211 D 257310 CDS NP_888566.1 33601006 2659510 2165549..2167222 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2751; hypothetical protein 2167222 2659510 BB2022 Bordetella bronchiseptica RB50 hypothetical protein NP_888566.1 2165549 D 257310 CDS NP_888567.1 33601007 2659916 2167227..2167895 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2750; lipoprotein 2167895 2659916 BB2023 Bordetella bronchiseptica RB50 lipoprotein NP_888567.1 2167227 D 257310 CDS NP_888568.1 33601008 2661991 2168052..2171873 1 NC_002927.3 proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus; forms dimers and is a peripherally membrane-associated protein; trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 2171873 putA 2661991 putA Bordetella bronchiseptica RB50 trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase NP_888568.1 2168052 D 257310 CDS NP_888569.1 33601009 2663934 2172126..2173271 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2747; ABC transport substrate-binding protein 2173271 2663934 BB2025 Bordetella bronchiseptica RB50 ABC transport substrate-binding protein NP_888569.1 2172126 D 257310 CDS NP_888570.1 33601010 2661615 2173421..2174350 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2746; ABC transporter 2174350 2661615 BB2026 Bordetella bronchiseptica RB50 ABC transporter NP_888570.1 2173421 D 257310 CDS NP_888571.1 33601011 2660112 2174347..2175435 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2745; ABC transporter ATP-binding protein 2175435 2660112 BB2027 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_888571.1 2174347 D 257310 CDS NP_888572.1 33601012 2662215 2175432..2176235 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2744; ABC transporter ATP-binding protein 2176235 2662215 BB2028 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_888572.1 2175432 D 257310 CDS NP_888573.1 33601013 2660225 2176232..2176963 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2743; ABC transporter ATP-binding protein 2176963 2660225 BB2029 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_888573.1 2176232 D 257310 CDS NP_888574.1 33601014 2662201 complement(2177021..2178310) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2742; hypothetical protein 2178310 2662201 BB2030 Bordetella bronchiseptica RB50 hypothetical protein NP_888574.1 2177021 R 257310 CDS NP_888575.1 33601015 2658952 2178407..2179009 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2741; TetR family transcriptional regulator 2179009 2658952 BB2031 Bordetella bronchiseptica RB50 TetR family transcriptional regulator NP_888575.1 2178407 D 257310 CDS NP_888576.1 33601016 2660340 2179242..2182223 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2738; bapc seems to undergo phase variation at a poly C; autotransporter 2182223 bapC 2660340 bapC Bordetella bronchiseptica RB50 autotransporter NP_888576.1 2179242 D 257310 CDS NP_888577.1 33601017 2658957 complement(2182286..2183524) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2737; ammonium transporter 2183524 amtB 2658957 amtB Bordetella bronchiseptica RB50 ammonium transporter NP_888577.1 2182286 R 257310 CDS NP_888578.1 33601018 2663926 complement(2183550..2183888) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2736; nitrogen regulatory protein P-II 2183888 2663926 BB2035 Bordetella bronchiseptica RB50 nitrogen regulatory protein P-II NP_888578.1 2183550 R 257310 CDS NP_888579.1 33601019 2661234 2184558..2184863 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2735; hypothetical protein 2184863 2661234 BB2036 Bordetella bronchiseptica RB50 hypothetical protein NP_888579.1 2184558 D 257310 CDS NP_888580.1 33601020 2662039 2184970..2186472 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2734; chelatase 2186472 2662039 BB2037 Bordetella bronchiseptica RB50 chelatase NP_888580.1 2184970 D 257310 CDS NP_888581.1 33601021 2662040 2186808..2187005 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2576; 50S ribosomal protein L35 2187005 rpmI 2662040 rpmI Bordetella bronchiseptica RB50 50S ribosomal protein L35 NP_888581.1 2186808 D 257310 CDS NP_888582.1 33601022 2659445 2187021..2187380 1 NC_002927.3 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 2187380 rplT 2659445 rplT Bordetella bronchiseptica RB50 50S ribosomal protein L20 NP_888582.1 2187021 D 257310 CDS NP_888583.2 161609277 2661544 2187455..2188477 1 NC_002927.3 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 2188477 pheS 2661544 pheS Bordetella bronchiseptica RB50 phenylalanyl-tRNA synthetase subunit alpha NP_888583.2 2187455 D 257310 CDS NP_888584.1 33601024 2659832 2188490..2190907 1 NC_002927.3 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 2190907 pheT 2659832 pheT Bordetella bronchiseptica RB50 phenylalanyl-tRNA synthetase subunit beta NP_888584.1 2188490 D 257310 CDS NP_888585.1 33601025 2661463 2190913..2191254 1 NC_002927.3 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit alpha 2191254 ihfA 2661463 ihfA Bordetella bronchiseptica RB50 integration host factor subunit alpha NP_888585.1 2190913 D 257310 CDS NP_888586.1 33601026 2661508 2191313..2191723 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2571; MerR family transcriptional regulator 2191723 2661508 BB2043 Bordetella bronchiseptica RB50 MerR family transcriptional regulator NP_888586.1 2191313 D 257310 CDS NP_888587.1 33601027 2660805 complement(2192119..2193210) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2570; hypothetical protein 2193210 2660805 BB2044 Bordetella bronchiseptica RB50 hypothetical protein NP_888587.1 2192119 R 257310 CDS NP_888588.1 33601028 2660806 2193394..2193990 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2569; lipoprotein 2193990 2660806 BB2045 Bordetella bronchiseptica RB50 lipoprotein NP_888588.1 2193394 D 257310 CDS NP_888589.1 33601029 2659267 complement(2194529..2195242) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2583; hypothetical protein 2195242 2659267 BB2046 Bordetella bronchiseptica RB50 hypothetical protein NP_888589.1 2194529 R 257310 CDS NP_888590.1 33601030 2661769 complement(2195365..2195838) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2584; acetyltransferase 2195838 2661769 BB2047 Bordetella bronchiseptica RB50 acetyltransferase NP_888590.1 2195365 R 257310 CDS NP_888591.1 33601031 2659370 complement(2195841..2196218) 1 NC_002927.3 hypothetical protein 2196218 2659370 BB2048 Bordetella bronchiseptica RB50 hypothetical protein NP_888591.1 2195841 R 257310 CDS NP_888592.1 33601032 2659371 2196343..2197260 1 NC_002927.3 beta-lactamase 2197260 2659371 BB2049 Bordetella bronchiseptica RB50 beta-lactamase NP_888592.1 2196343 D 257310 CDS NP_888593.1 33601033 2662618 complement(2197275..2197628) 1 NC_002927.3 hypothetical protein 2197628 2662618 BB2050 Bordetella bronchiseptica RB50 hypothetical protein NP_888593.1 2197275 R 257310 CDS NP_888594.1 33601034 2660295 complement(2197646..2198164) 1 NC_002927.3 regulatory protein 2198164 2660295 BB2051 Bordetella bronchiseptica RB50 regulatory protein NP_888594.1 2197646 R 257310 CDS NP_888595.1 33601035 2660610 complement(2198175..2198777) 1 NC_002927.3 hypothetical protein 2198777 2660610 BB2052 Bordetella bronchiseptica RB50 hypothetical protein NP_888595.1 2198175 R 257310 CDS NP_888596.1 33601036 2661082 2198881..2199162 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2581; hypothetical protein 2199162 2661082 BB2053 Bordetella bronchiseptica RB50 hypothetical protein NP_888596.1 2198881 D 257310 CDS NP_888597.1 33601037 2661083 complement(2199277..2200890) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2580; GntR family transcriptional regulator 2200890 2661083 BB2054 Bordetella bronchiseptica RB50 GntR family transcriptional regulator NP_888597.1 2199277 R 257310 CDS NP_888598.1 33601038 2661244 2201475..2201807 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2567; hypothetical protein 2201807 2661244 BB2055 Bordetella bronchiseptica RB50 hypothetical protein NP_888598.1 2201475 D 257310 CDS NP_888599.1 33601039 2660277 complement(2201949..2202689) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2566; endonulease 2202689 2660277 BB2056 Bordetella bronchiseptica RB50 endonulease NP_888599.1 2201949 R 257310 CDS NP_888600.1 33601040 2660278 2202865..2202996 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2565; entericidin A anti-toxin precursor 2202996 ecnA2 2660278 ecnA2 Bordetella bronchiseptica RB50 entericidin A anti-toxin precursor NP_888600.1 2202865 D 257310 CDS NP_888601.1 33601041 2659738 2203122..2203556 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2564; lipoprotein 2203556 2659738 BB2058 Bordetella bronchiseptica RB50 lipoprotein NP_888601.1 2203122 D 257310 CDS NP_888602.1 33601042 2659291 2203558..2203974 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2563; integral membrane protein 2203974 2659291 BB2059 Bordetella bronchiseptica RB50 integral membrane protein NP_888602.1 2203558 D 257310 CDS NP_888603.2 161609276 2659396 2204081..2205376 1 NC_002927.3 catalyzes the conversion of carbamoyl phosphate and aspartate to form N-carbamoyl aspartate; aspartate carbamoyltransferase 2205376 pyrB 2659396 pyrB Bordetella bronchiseptica RB50 aspartate carbamoyltransferase NP_888603.2 2204081 D 257310 CDS NP_888604.1 33601044 2662003 complement(2205416..2206315) 1 NC_002927.3 Required for efficient pilin antigenic variation; recombination associated protein 2206315 rdgC 2662003 rdgC Bordetella bronchiseptica RB50 recombination associated protein NP_888604.1 2205416 R 257310 CDS NP_888605.1 33601045 2662004 2206469..2206687 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2560; hypothetical protein 2206687 2662004 BB2062 Bordetella bronchiseptica RB50 hypothetical protein NP_888605.1 2206469 D 257310 CDS NP_888606.1 33601046 2659911 complement(2206951..2208258) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2559; hypothetical protein 2208258 2659911 BB2063 Bordetella bronchiseptica RB50 hypothetical protein NP_888606.1 2206951 R 257310 CDS NP_888607.1 33601047 2662235 complement(2208276..2209163) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2558; LysR family transcriptional regulator 2209163 2662235 BB2064 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_888607.1 2208276 R 257310 CDS NP_888608.1 33601048 2662621 2209379..2210542 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2557; hypothetical protein 2210542 2662621 BB2065 Bordetella bronchiseptica RB50 hypothetical protein NP_888608.1 2209379 D 257310 CDS NP_888609.1 33601049 2660418 2210550..2210942 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2556; hypothetical protein 2210942 2660418 BB2066 Bordetella bronchiseptica RB50 hypothetical protein NP_888609.1 2210550 D 257310 CDS NP_888610.1 33601050 2660419 2210943..2211386 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2555; hypothetical protein 2211386 2660419 BB2067 Bordetella bronchiseptica RB50 hypothetical protein NP_888610.1 2210943 D 257310 CDS NP_888611.1 33601051 2660312 2211387..2212133 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2554; 3-oxoacyl-ACP reductase 2212133 fabG 2660312 fabG Bordetella bronchiseptica RB50 3-oxoacyl-ACP reductase NP_888611.1 2211387 D 257310 CDS NP_888612.1 33601052 2660405 2212171..2213208 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2553; iron ABC transporter substrate-binding protein 2213208 2660405 BB2069 Bordetella bronchiseptica RB50 iron ABC transporter substrate-binding protein NP_888612.1 2212171 D 257310 CDS NP_888613.1 33601053 2662603 2213249..2214988 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2552; ABC transporter substrate-binding protein 2214988 2662603 BB2070 Bordetella bronchiseptica RB50 ABC transporter substrate-binding protein NP_888613.1 2213249 D 257310 CDS NP_888614.1 33601054 2660319 2214985..2216049 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2551; ABC transporter ATP-binding protein 2216049 2660319 BB2071 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_888614.1 2214985 D 257310 CDS NP_888615.1 33601055 2660884 2216077..2216853 1 NC_002927.3 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 2216853 2660884 BB2072 Bordetella bronchiseptica RB50 enoyl-CoA hydratase NP_888615.1 2216077 D 257310 CDS NP_888616.1 33601056 2660683 complement(2217102..2218778) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2549; sugar transport protein 2218778 2660683 BB2073 Bordetella bronchiseptica RB50 sugar transport protein NP_888616.1 2217102 R 257310 CDS NP_888617.1 33601057 2659483 complement(2218973..2220331) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2548; two-component system histidine kinase 2220331 2659483 BB2074 Bordetella bronchiseptica RB50 two-component system histidine kinase NP_888617.1 2218973 R 257310 CDS NP_888618.1 33601058 2659276 complement(2220447..2221136) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2547; two-component response regulatory protein 2221136 2659276 BB2075 Bordetella bronchiseptica RB50 two-component response regulatory protein NP_888618.1 2220447 R 257310 CDS NP_888619.1 33601059 2661160 2221376..2222437 1 NC_002927.3 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 2222437 recA 2661160 recA Bordetella bronchiseptica RB50 recombinase A NP_888619.1 2221376 D 257310 CDS NP_888620.1 33601060 2661016 2222470..2223036 1 NC_002927.3 binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities; recombination regulator RecX 2223036 recX 2661016 recX Bordetella bronchiseptica RB50 recombination regulator RecX NP_888620.1 2222470 D 257310 CDS NP_888621.1 33601061 2662015 complement(2223111..2224040) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2544; transcriptional regulatory protein 2224040 metR 2662015 metR Bordetella bronchiseptica RB50 transcriptional regulatory protein NP_888621.1 2223111 R 257310 CDS NP_888622.1 33601062 2660297 2224202..2226496 1 NC_002927.3 catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 2226496 metE 2660297 metE Bordetella bronchiseptica RB50 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase NP_888622.1 2224202 D 257310 CDS NP_888623.1 33601063 2661597 2226701..2227303 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2542; hypothetical protein 2227303 2661597 BB2080 Bordetella bronchiseptica RB50 hypothetical protein NP_888623.1 2226701 D 257310 CDS NP_888624.1 33601064 2661419 2227314..2228474 1 NC_002927.3 catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 2228474 sucC 2661419 sucC Bordetella bronchiseptica RB50 succinyl-CoA synthetase subunit beta NP_888624.1 2227314 D 257310 CDS NP_888625.1 33601065 2661572 2228494..2229375 1 NC_002927.3 Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha 2229375 sucD 2661572 sucD Bordetella bronchiseptica RB50 succinyl-CoA synthetase subunit alpha NP_888625.1 2228494 D 257310 CDS NP_888626.1 33601066 2659364 2229651..2230346 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2539; integral membrane protein 2230346 2659364 BB2083 Bordetella bronchiseptica RB50 integral membrane protein NP_888626.1 2229651 D 257310 CDS NP_888627.1 33601067 2659176 2230418..2231224 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2538; integral membrane protein 2231224 2659176 BB2084 Bordetella bronchiseptica RB50 integral membrane protein NP_888627.1 2230418 D 257310 CDS NP_888628.1 33601068 2662220 2231343..2232287 1 NC_002927.3 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 2232287 hemC 2662220 hemC Bordetella bronchiseptica RB50 porphobilinogen deaminase NP_888628.1 2231343 D 257310 CDS NP_888629.1 33601069 2659047 2232284..2233108 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2536; uroporphyrinogen-III synthase 2233108 2659047 BB2086 Bordetella bronchiseptica RB50 uroporphyrinogen-III synthase NP_888629.1 2232284 D 257310 CDS NP_888630.1 33601070 2659109 2233146..2234330 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2535; hypothetical protein 2234330 2659109 BB2087 Bordetella bronchiseptica RB50 hypothetical protein NP_888630.1 2233146 D 257310 CDS NP_888631.1 33601071 2659052 2234334..2235929 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2534; hypothetical protein 2235929 2659052 BB2088 Bordetella bronchiseptica RB50 hypothetical protein NP_888631.1 2234334 D 257310 CDS NP_888632.1 33601072 2659227 2235958..2236494 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2533; inorganic pyrophosphatase 2236494 ppa 2659227 ppa Bordetella bronchiseptica RB50 inorganic pyrophosphatase NP_888632.1 2235958 D 257310 CDS NP_888633.1 33601073 2659647 2236678..2237373 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2532; hypothetical protein 2237373 2659647 BB2090 Bordetella bronchiseptica RB50 hypothetical protein NP_888633.1 2236678 D 257310 CDS NP_888634.1 33601074 2660611 2237400..2237531 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2531; entericidin B-like bacteriolytic toxin 2237531 ecnB 2660611 ecnB Bordetella bronchiseptica RB50 entericidin B-like bacteriolytic toxin NP_888634.1 2237400 D 257310 CDS NP_888635.1 33601075 2660599 2237889..2238152 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2530; integral membrane protein 2238152 2660599 BB2092 Bordetella bronchiseptica RB50 integral membrane protein NP_888635.1 2237889 D 257310 CDS NP_888636.1 33601076 2659414 2238149..2239465 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2529; hypothetical protein 2239465 2659414 BB2093 Bordetella bronchiseptica RB50 hypothetical protein NP_888636.1 2238149 D 257310 CDS NP_888637.1 33601077 2659887 2239462..2240085 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2528A; hypothetical protein 2240085 2659887 BB2094 Bordetella bronchiseptica RB50 hypothetical protein NP_888637.1 2239462 D 257310 CDS NP_888638.1 33601078 2659888 2240082..2240744 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2528; hypothetical protein 2240744 2659888 BB2095 Bordetella bronchiseptica RB50 hypothetical protein NP_888638.1 2240082 D 257310 CDS NP_888639.1 33601079 2659889 2240741..2241574 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2527; hypothetical protein 2241574 2659889 BB2096 Bordetella bronchiseptica RB50 hypothetical protein NP_888639.1 2240741 D 257310 CDS NP_888640.1 33601080 2662592 2241571..2242983 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2526; secretory apparatus 2242983 2662592 BB2097 Bordetella bronchiseptica RB50 secretory apparatus NP_888640.1 2241571 D 257310 CDS NP_888641.1 33601081 2660336 2242980..2244596 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2525A; secretory protein 2244596 2660336 BB2098 Bordetella bronchiseptica RB50 secretory protein NP_888641.1 2242980 D 257310 CDS NP_888642.1 33601082 2659646 2244593..2245438 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2525; hypothetical protein 2245438 2659646 BB2099 Bordetella bronchiseptica RB50 hypothetical protein NP_888642.1 2244593 D 257310 CDS NP_888643.1 33601083 2660735 2245449..2246345 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2524A+BP1081; hypothetical protein 2246345 2660735 BB2100 Bordetella bronchiseptica RB50 hypothetical protein NP_888643.1 2245449 D 257310 CDS NP_888644.1 33601084 2662099 complement(2246567..2247367) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1083; hypothetical protein 2247367 2662099 BB2101 Bordetella bronchiseptica RB50 hypothetical protein NP_888644.1 2246567 R 257310 CDS NP_888645.1 33601085 2660860 complement(2247411..2248397) 1 NC_002927.3 catalyzes the formation of O-phospho-L-homoserine from L-homoserine; homoserine kinase 2248397 thrB 2660860 thrB Bordetella bronchiseptica RB50 homoserine kinase NP_888645.1 2247411 R 257310 CDS NP_888646.1 33601086 2659193 2248537..2249550 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1085; tRNA-dihydrouridine synthase A 2249550 2659193 BB2103 Bordetella bronchiseptica RB50 tRNA-dihydrouridine synthase A NP_888646.1 2248537 D 257310 CDS NP_888647.1 33601087 2660875 complement(2249561..2250019) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1087; hypothetical protein 2250019 2660875 BB2104 Bordetella bronchiseptica RB50 hypothetical protein NP_888647.1 2249561 R 257310 CDS NP_888648.1 33601088 2660906 complement(2250056..2251369) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1088; hypothetical protein 2251369 2660906 BB2105 Bordetella bronchiseptica RB50 hypothetical protein NP_888648.1 2250056 R 257310 CDS NP_888649.1 33601089 2660017 2251387..2251758 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1089; hypothetical protein 2251758 2660017 BB2106 Bordetella bronchiseptica RB50 hypothetical protein NP_888649.1 2251387 D 257310 CDS NP_888650.1 33601090 2661239 2251755..2253242 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1090; hypothetical protein 2253242 2661239 BB2107 Bordetella bronchiseptica RB50 hypothetical protein NP_888650.1 2251755 D 257310 CDS NP_888651.1 33601091 2659069 2253335..2254111 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1091; two-component response regulator 2254111 2659069 BB2108 Bordetella bronchiseptica RB50 two-component response regulator NP_888651.1 2253335 D 257310 CDS NP_888652.1 33601092 2659958 complement(2254093..2256975) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1092; two-component histidine kinase 2256975 2659958 BB2109 Bordetella bronchiseptica RB50 two-component histidine kinase NP_888652.1 2254093 R 257310 CDS NP_888653.1 33601093 2659956 2257195..2258571 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1460; hypothetical protein 2258571 2659956 BB2110 Bordetella bronchiseptica RB50 hypothetical protein NP_888653.1 2257195 D 257310 CDS NP_888654.1 33601094 2661324 2258613..2259674 1 NC_002927.3 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 2259674 aroC 2661324 aroC Bordetella bronchiseptica RB50 chorismate synthase NP_888654.1 2258613 D 257310 CDS NP_888655.1 33601095 2662624 2259708..2260544 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1463; lipoprotein 2260544 2662624 BB2112 Bordetella bronchiseptica RB50 lipoprotein NP_888655.1 2259708 D 257310 CDS NP_888656.1 33601096 2661532 complement(2260554..2261096) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1464; molybdopterin-guanine dinucleotide biosynthesis protein B 2261096 mobB 2661532 mobB Bordetella bronchiseptica RB50 molybdopterin-guanine dinucleotide biosynthesis protein B NP_888656.1 2260554 R 257310 CDS NP_888657.1 33601097 2661557 complement(2261110..2262402) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1465; molybdopterin biosynthesis protein 2262402 moeA 2661557 moeA Bordetella bronchiseptica RB50 molybdopterin biosynthesis protein NP_888657.1 2261110 R 257310 CDS NP_888658.1 33601098 2660646 complement(2262399..2263007) 1 NC_002927.3 in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis; molybdopterin-guanine dinucleotide biosynthesis protein MobA 2263007 mobA 2660646 mobA Bordetella bronchiseptica RB50 molybdopterin-guanine dinucleotide biosynthesis protein MobA NP_888658.1 2262399 R 257310 CDS NP_888659.1 33601099 2660833 2263144..2264241 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1467; iron sulfur binding protein 2264241 2660833 BB2116 Bordetella bronchiseptica RB50 iron sulfur binding protein NP_888659.1 2263144 D 257310 CDS NP_888660.1 33601100 2660931 2264248..2264808 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1468; hypothetical protein 2264808 2660931 BB2117 Bordetella bronchiseptica RB50 hypothetical protein NP_888660.1 2264248 D 257310 CDS NP_888661.1 33601101 2660889 2264805..2265485 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1469; hypothetical protein 2265485 2660889 BB2118 Bordetella bronchiseptica RB50 hypothetical protein NP_888661.1 2264805 D 257310 CDS NP_888662.1 33601102 2660890 2265482..2267599 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1470; iron-sulfur binding protein 2267599 2660890 BB2119 Bordetella bronchiseptica RB50 iron-sulfur binding protein NP_888662.1 2265482 D 257310 CDS NP_888663.1 33601103 2662169 2267596..2268225 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1471; hypothetical protein 2268225 2662169 BB2120 Bordetella bronchiseptica RB50 hypothetical protein NP_888663.1 2267596 D 257310 CDS NP_888664.1 33601104 2662056 2268601..2271570 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1472; formate dehydrogenase large subunit 2271570 fdhA 2662056 fdhA Bordetella bronchiseptica RB50 formate dehydrogenase large subunit NP_888664.1 2268601 D 257310 CDS NP_888665.1 33601105 2661154 2271581..2272210 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1473; formate dehydrogenase iron-sulfur subunit 2272210 fdhB 2661154 fdhB Bordetella bronchiseptica RB50 formate dehydrogenase iron-sulfur subunit NP_888665.1 2271581 D 257310 CDS NP_888666.1 33601106 2662062 2272207..2272440 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1474; lipoprotein 2272440 2662062 BB2123 Bordetella bronchiseptica RB50 lipoprotein NP_888666.1 2272207 D 257310 CDS NP_888667.1 33601107 2659408 2272453..2273610 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1475; formate dehydrogenase subunit C precursor 2273610 fdhC 2659408 fdhC Bordetella bronchiseptica RB50 formate dehydrogenase subunit C precursor NP_888667.1 2272453 D 257310 CDS NP_888668.1 33601108 2658960 2273633..2274007 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1476; hypothetical protein 2274007 2658960 BB2125 Bordetella bronchiseptica RB50 hypothetical protein NP_888668.1 2273633 D 257310 CDS NP_888669.1 33601109 2659657 complement(2274041..2275156) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1477; hypothetical protein 2275156 2659657 BB2126 Bordetella bronchiseptica RB50 hypothetical protein NP_888669.1 2274041 R 257310 CDS NP_888670.1 33601110 2660339 2275318..2276055 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1478; ABC transporter permease 2276055 2660339 BB2127 Bordetella bronchiseptica RB50 ABC transporter permease NP_888670.1 2275318 D 257310 CDS NP_888671.1 33601111 2659840 2276052..2276756 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1479; ABC transporter ATP-binding protein 2276756 2659840 BB2128 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_888671.1 2276052 D 257310 CDS NP_888672.1 33601112 2661377 2276753..2277571 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1480; hypothetical protein 2277571 2661377 BB2129 Bordetella bronchiseptica RB50 hypothetical protein NP_888672.1 2276753 D 257310 CDS NP_888673.1 33601113 2661406 2277825..2279258 1 NC_002927.3 dehydratase, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 2279258 leuC 2661406 leuC Bordetella bronchiseptica RB50 isopropylmalate isomerase large subunit NP_888673.1 2277825 D 257310 CDS NP_888674.2 161609275 2660903 2279273..2279923 1 NC_002927.3 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit 2279923 leuD 2660903 leuD Bordetella bronchiseptica RB50 isopropylmalate isomerase small subunit NP_888674.2 2279273 D 257310 CDS NP_888675.1 33601115 2660922 2280005..2281081 1 NC_002927.3 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 2281081 leuB 2660922 leuB Bordetella bronchiseptica RB50 3-isopropylmalate dehydrogenase NP_888675.1 2280005 D 257310 CDS NP_888676.1 33601116 2661008 2281268..2282398 1 NC_002927.3 catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase 2282398 asd 2661008 asd Bordetella bronchiseptica RB50 aspartate-semialdehyde dehydrogenase NP_888676.1 2281268 D 257310 CDS NP_888677.1 33601117 2661006 2282449..2284233 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1485; hypothetical protein 2284233 2661006 BB2134 Bordetella bronchiseptica RB50 hypothetical protein NP_888677.1 2282449 D 257310 CDS NP_888678.1 33601118 2660995 2284237..2285049 1 NC_002927.3 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 2285049 truA 2660995 truA Bordetella bronchiseptica RB50 tRNA pseudouridine synthase A NP_888678.1 2284237 D 257310 CDS NP_888679.1 33601119 2660982 2285194..2286288 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1487; ABC transporter substrate-binding protein 2286288 smoM 2660982 smoM Bordetella bronchiseptica RB50 ABC transporter substrate-binding protein NP_888679.1 2285194 D 257310 CDS NP_888680.1 33601120 2659701 2286500..2287129 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1488; hypothetical protein 2287129 2659701 BB2137 Bordetella bronchiseptica RB50 hypothetical protein NP_888680.1 2286500 D 257310 CDS NP_888681.1 33601121 2661268 2287132..2288799 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1489; hypothetical protein 2288799 2661268 BB2138 Bordetella bronchiseptica RB50 hypothetical protein NP_888681.1 2287132 D 257310 CDS NP_888682.1 33601122 2659216 2288814..2289470 1 NC_002927.3 catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis; N-(5'-phosphoribosyl)anthranilate isomerase 2289470 trpF 2659216 trpF Bordetella bronchiseptica RB50 N-(5'-phosphoribosyl)anthranilate isomerase NP_888682.1 2288814 D 257310 CDS NP_888683.1 33601123 2663939 complement(2289771..2290049) 1 NC_002927.3 hypothetical protein 2290049 2663939 BB2140 Bordetella bronchiseptica RB50 hypothetical protein NP_888683.1 2289771 R 257310 CDS NP_888684.1 33601124 2662125 complement(2290036..2290302) 1 NC_002927.3 hypothetical protein 2290302 2662125 BB2141 Bordetella bronchiseptica RB50 hypothetical protein NP_888684.1 2290036 R 257310 CDS NP_888685.1 33601125 2662126 complement(2290533..2292074) 1 NC_002927.3 hypothetical protein 2292074 2662126 BB2142 Bordetella bronchiseptica RB50 hypothetical protein NP_888685.1 2290533 R 257310 CDS NP_888686.1 33601126 2659300 complement(2292136..2293014) 1 NC_002927.3 hypothetical protein 2293014 2659300 BB2143 Bordetella bronchiseptica RB50 hypothetical protein NP_888686.1 2292136 R 257310 CDS NP_888687.1 33601127 2661245 2293411..2294043 1 NC_002927.3 hypothetical protein 2294043 2661245 BB2144 Bordetella bronchiseptica RB50 hypothetical protein NP_888687.1 2293411 D 257310 CDS NP_888688.1 33601128 2659678 2294154..2294864 1 NC_002927.3 porin involved in osmoregulation allowing water to move into and out of the cell in response to osmotic pressure; aquaporin Z 2294864 aqpZ 2659678 aqpZ Bordetella bronchiseptica RB50 aquaporin Z NP_888688.1 2294154 D 257310 CDS NP_888689.1 33601129 2660137 complement(2294903..2295175) 1 NC_002927.3 hypothetical protein 2295175 2660137 BB2146 Bordetella bronchiseptica RB50 hypothetical protein NP_888689.1 2294903 R 257310 CDS NP_888690.1 33601130 2660138 2295335..2296759 1 NC_002927.3 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 2296759 hemN 2660138 hemN Bordetella bronchiseptica RB50 coproporphyrinogen III oxidase NP_888690.1 2295335 D 257310 CDS NP_888691.1 33601131 2659367 complement(2296756..2297148) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1495; hypothetical protein 2297148 2659367 BB2148 Bordetella bronchiseptica RB50 hypothetical protein NP_888691.1 2296756 R 257310 CDS NP_888692.1 33601132 2659279 complement(2297154..2297930) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1496; two-component response regulator 2297930 2659279 BB2149 Bordetella bronchiseptica RB50 two-component response regulator NP_888692.1 2297154 R 257310 CDS NP_888693.1 33601133 2661457 2298318..2300267 1 NC_002927.3 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 2300267 thrS 2661457 thrS Bordetella bronchiseptica RB50 threonyl-tRNA synthetase NP_888693.1 2298318 D 257310 CDS NP_888694.1 33601134 2660603 2300339..2300833 1 NC_002927.3 IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 2300833 infC 2660603 infC Bordetella bronchiseptica RB50 translation initiation factor IF-3 NP_888694.1 2300339 D 257310 CDS NP_888695.1 33601135 2660613 2300970..2301926 1 NC_002927.3 catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase 2301926 gshB 2660613 gshB Bordetella bronchiseptica RB50 glutathione synthetase NP_888695.1 2300970 D 257310 CDS NP_888696.1 33601136 2660757 2301937..2302335 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1500; PTS system subunit IIA 2302335 2660757 BB2153 Bordetella bronchiseptica RB50 PTS system subunit IIA NP_888696.1 2301937 D 257310 CDS NP_888697.1 33601137 2660651 2302451..2302720 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1501; phosphocarrier protein HPr 2302720 ptsH 2660651 ptsH Bordetella bronchiseptica RB50 phosphocarrier protein HPr NP_888697.1 2302451 D 257310 CDS NP_888698.1 33601138 2660803 2302842..2304536 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1502; phosphoenolpyruvate-protein phosphotransferase 2304536 ptsI 2660803 ptsI Bordetella bronchiseptica RB50 phosphoenolpyruvate-protein phosphotransferase NP_888698.1 2302842 D 257310 CDS NP_888699.1 33601139 2660938 complement(2304701..2304925) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1503; hypothetical protein 2304925 2660938 BB2156 Bordetella bronchiseptica RB50 hypothetical protein NP_888699.1 2304701 R 257310 CDS NP_888700.1 33601140 2660939 complement(2304922..2305347) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1504; osmotically inducible protein C 2305347 osmC 2660939 osmC Bordetella bronchiseptica RB50 osmotically inducible protein C NP_888700.1 2304922 R 257310 CDS NP_888701.1 33601141 2661262 2305522..2306472 1 NC_002927.3 catalyzes the formation of L-proline from L-ornithine; ornithine cyclodeaminase 2306472 2661262 BB2158 Bordetella bronchiseptica RB50 ornithine cyclodeaminase NP_888701.1 2305522 D 257310 CDS NP_888702.1 33601142 2659171 2306514..2307674 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1506; hypothetical protein 2307674 2659171 BB2159 Bordetella bronchiseptica RB50 hypothetical protein NP_888702.1 2306514 D 257310 CDS NP_888703.1 33601143 2659652 2307835..2308755 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1507; ectoine/hydroxyectoine ABC transporter substrate-binding protein 2308755 2659652 BB2160 Bordetella bronchiseptica RB50 ectoine/hydroxyectoine ABC transporter substrate-binding protein NP_888703.1 2307835 D 257310 CDS NP_888704.1 33601144 2659739 2308768..2309409 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1508; inner membrane component of binding-protein-dependent transport system 2309409 2659739 BB2161 Bordetella bronchiseptica RB50 inner membrane component of binding-protein-dependent transport system NP_888704.1 2308768 D 257310 CDS NP_888705.1 33601145 2659271 2309406..2310077 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1509; inner membrane component of binding-protein-dependent transport system 2310077 2659271 BB2162 Bordetella bronchiseptica RB50 inner membrane component of binding-protein-dependent transport system NP_888705.1 2309406 D 257310 CDS NP_888706.1 33601146 2659265 2310074..2310844 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1510; phosphate ABC transporter ATP-binding protein 2310844 2659265 BB2163 Bordetella bronchiseptica RB50 phosphate ABC transporter ATP-binding protein NP_888706.1 2310074 D 257310 CDS NP_888707.1 33601147 2659294 complement(2310841..2311290) 1 NC_002927.3 catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase 2311290 dut 2659294 dut Bordetella bronchiseptica RB50 deoxyuridine 5'-triphosphate nucleotidohydrolase NP_888707.1 2310841 R 257310 CDS NP_888708.1 33601148 2661222 complement(2311384..2311932) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2584A; hypothetical protein 2311932 2661222 BB2165 Bordetella bronchiseptica RB50 hypothetical protein NP_888708.1 2311384 R 257310 CDS NP_888709.1 33601149 2659676 complement(2311929..2312567) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2585; DedA family integral membrane protein 2312567 2659676 BB2166 Bordetella bronchiseptica RB50 DedA family integral membrane protein NP_888709.1 2311929 R 257310 CDS NP_888710.1 33601150 2661940 2312640..2313710 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2586; integral membrane protein 2313710 2661940 BB2167 Bordetella bronchiseptica RB50 integral membrane protein NP_888710.1 2312640 D 257310 CDS NP_888711.1 33601151 2660232 complement(2313707..2314180) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1749; AsnC family transcriptional regulator 2314180 2660232 BB2168 Bordetella bronchiseptica RB50 AsnC family transcriptional regulator NP_888711.1 2313707 R 257310 CDS NP_888712.1 33601152 2659203 2314342..2315280 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1750; hypothetical protein 2315280 2659203 BB2169 Bordetella bronchiseptica RB50 hypothetical protein NP_888712.1 2314342 D 257310 CDS NP_888713.1 33601153 2662625 complement(2315282..2316490) 1 NC_002927.3 catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 2316490 dfp 2662625 dfp Bordetella bronchiseptica RB50 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase NP_888713.1 2315282 R 257310 CDS NP_888714.1 33601154 2659810 complement(2316595..2317101) 1 NC_002927.3 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 2317101 lspA 2659810 lspA Bordetella bronchiseptica RB50 lipoprotein signal peptidase NP_888714.1 2316595 R 257310 CDS NP_888715.1 33601155 2659830 complement(2317104..2319965) 1 NC_002927.3 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 2319965 ileS 2659830 ileS Bordetella bronchiseptica RB50 isoleucyl-tRNA synthetase NP_888715.1 2317104 R 257310 CDS NP_888716.1 33601156 2659929 complement(2319955..2320920) 1 NC_002927.3 catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase 2320920 ribF 2659929 ribF Bordetella bronchiseptica RB50 bifunctional riboflavin kinase/FMN adenylyltransferase NP_888716.1 2319955 R 257310 CDS NP_888717.1 33601157 2659971 2320980..2321633 1 NC_002927.3 glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate; phosphoribosylglycinamide formyltransferase 2321633 purN 2659971 purN Bordetella bronchiseptica RB50 phosphoribosylglycinamide formyltransferase NP_888717.1 2320980 D 257310 CDS NP_888718.1 33601158 2659972 2321821..2323122 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1756; hypothetical protein 2323122 2659972 BB2175 Bordetella bronchiseptica RB50 hypothetical protein NP_888718.1 2321821 D 257310 CDS NP_888719.1 33601159 2661367 complement(2323119..2323493) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1757; hypothetical protein 2323493 2661367 BB2176 Bordetella bronchiseptica RB50 hypothetical protein NP_888719.1 2323119 R 257310 CDS NP_888720.1 33601160 2661385 2323755..2324963 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1758; fatty acid desaturase 2324963 2661385 BB2177 Bordetella bronchiseptica RB50 fatty acid desaturase NP_888720.1 2323755 D 257310 CDS NP_888721.1 33601161 2661428 2324960..2327260 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1759; DNA helicase II 2327260 uvrD 2661428 uvrD Bordetella bronchiseptica RB50 DNA helicase II NP_888721.1 2324960 D 257310 CDS NP_888722.1 33601162 2659443 complement(2327313..2329925) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1760; hypothetical protein 2329925 2659443 BB2179 Bordetella bronchiseptica RB50 hypothetical protein NP_888722.1 2327313 R 257310 CDS NP_888723.1 33601163 2659444 complement(2330285..2332210) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1761; ABC transporter ATP-binding protein 2332210 2659444 BB2180 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_888723.1 2330285 R 257310 CDS NP_888724.1 33601164 2660811 complement(2332207..2333103) 1 NC_002927.3 involved in methylation of ribosomal protein L3; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 2333103 2660811 BB2181 Bordetella bronchiseptica RB50 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase NP_888724.1 2332207 R 257310 CDS NP_888725.1 33601165 2660812 complement(2333110..2334249) 1 NC_002927.3 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 2334249 dapE 2660812 dapE Bordetella bronchiseptica RB50 succinyl-diaminopimelate desuccinylase NP_888725.1 2333110 R 257310 CDS NP_888726.1 33601166 2660853 complement(2334249..2335070) 1 NC_002927.3 catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 2335070 dapD 2660853 dapD Bordetella bronchiseptica RB50 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase NP_888726.1 2334249 R 257310 CDS NP_888727.1 33601167 2659618 complement(2335096..2336310) 1 NC_002927.3 catalyzes the formation of succinyldiaminopimelate from N-succinyl-2-amino-6-ketopimelate; succinyldiaminopimelate transaminase 2336310 dapC 2659618 dapC Bordetella bronchiseptica RB50 succinyldiaminopimelate transaminase NP_888727.1 2335096 R 257310 CDS NP_888728.1 33601168 2662211 2336592..2337581 1 NC_002927.3 Similar to Ralstonia solanacearum probable integrase/recombinase rsc1655 or rs03938 SWALL:Q8XYV1 (EMBL:AL646065) (334 aa) fasta scores: E(): 6.7e-47, 43.88% id in 335 aa, and to Pasteurella multocida integrase/recombinase rcI SWALL:Q9L6A5 (EMBL:AF237934) (329 aa) fasta scores: E(): 1.3e-36, 37.34% id in 332 aa; integrase 2337581 2662211 BB2185 Bordetella bronchiseptica RB50 integrase NP_888728.1 2336592 D 257310 CDS NP_888729.1 33601169 2662212 complement(2337578..2337778) 1 NC_002927.3 Similar to Vibrio cholerae transcriptional regulator vc0497 SWALL:Q9KUL8 (EMBL:AE004136) (66 aa) fasta scores: E(): 0.032, 28.57% id in 63 aa; hypothetical protein 2337778 2662212 BB2186 Bordetella bronchiseptica RB50 hypothetical protein NP_888729.1 2337578 R 257310 CDS NP_888730.1 33601170 2659236 complement(2337779..2337898) 1 NC_002927.3 no significant database matches; hypothetical protein 2337898 2659236 BB2187 Bordetella bronchiseptica RB50 hypothetical protein NP_888730.1 2337779 R 257310 CDS NP_888731.1 33601171 2659237 complement(2337891..2338556) 1 NC_002927.3 Similar to Bacteriophage Mx8 hypothetical 25.3 kDa protein SWALL:O03965 (EMBL:U64984) (222 aa) fasta scores: E(): 0.00013, 42.54% id in 228 aa, and to Xylella fastidiosa phage-related protein xf0485 SWALL:Q9PG17 (EMBL:AE003898) (181 aa) fasta scores: E(): 0.0047, 37.73% id in 212 aa; hypothetical protein 2338556 2659237 BB2188 Bordetella bronchiseptica RB50 hypothetical protein NP_888731.1 2337891 R 257310 CDS NP_888732.1 33601172 2659238 complement(2338549..2339718) 1 NC_002927.3 no significant database matches; hypothetical protein 2339718 2659238 BB2189 Bordetella bronchiseptica RB50 hypothetical protein NP_888732.1 2338549 R 257310 CDS NP_888733.1 33601173 2658973 complement(2339818..2340237) 1 NC_002927.3 no significant database matches; hypothetical protein 2340237 2658973 BB2190 Bordetella bronchiseptica RB50 hypothetical protein NP_888733.1 2339818 R 257310 CDS NP_888734.1 33601174 2658974 complement(2340326..2340973) 1 NC_002927.3 Similar to Bacteriophage VT2-Sa ExOnuclease exO SWALL:Q9T1N7 (EMBL:AP000363) (226 aa) fasta scores: E(): 1.4e-11, 31.06% id in 206 aa, and to Escherichia coli O157:H7 exonuclease exo or ecs1174 SWALL:Q9KXG3 (EMBL:AP000422) (226 aa) fasta scores: E(): 1.2e-11, 31.06% id in 206 aa; phage-related exonuclease 2340973 2658974 BB2191 Bordetella bronchiseptica RB50 phage-related exonuclease NP_888734.1 2340326 R 257310 CDS NP_888735.1 33601175 2658975 complement(2340970..2341956) 1 NC_002927.3 Similar to Escherichia coli rect protein RecT or b1349 SWALL:RECT_ECOLI (SWALL:P33228) (269 aa) fasta scores: E(): 8e-10, 30.51% id in 213 aa, and to Proteus vulgaris DNA recombination protein orf223 SWALL:BAB93785 (EMBL:AP004237) (510 aa) fasta scores: E(): 7.8e-13, 31.74% id in 315 aa; phage-related DNA recombination protein 2341956 2658975 BB2192 Bordetella bronchiseptica RB50 phage-related DNA recombination protein NP_888735.1 2340970 R 257310 CDS NP_888736.1 33601176 2662179 complement(2341960..2342142) 1 NC_002927.3 no significant database matches; phage-related membrane protein 2342142 2662179 BB2193 Bordetella bronchiseptica RB50 phage-related membrane protein NP_888736.1 2341960 R 257310 CDS NP_888737.1 33601177 2660002 complement(2342139..2342516) 1 NC_002927.3 no significant database matches; hypothetical protein 2342516 2660002 BB2194 Bordetella bronchiseptica RB50 hypothetical protein NP_888737.1 2342139 R 257310 CDS NP_888738.1 33601178 2660003 complement(2342519..2342728) 1 NC_002927.3 no significant database matches; hypothetical protein 2342728 2660003 BB2195 Bordetella bronchiseptica RB50 hypothetical protein NP_888738.1 2342519 R 257310 CDS NP_888739.1 33601179 2660329 complement(2342748..2343215) 1 NC_002927.3 no significant database matches; hypothetical protein 2343215 2660329 BB2196 Bordetella bronchiseptica RB50 hypothetical protein NP_888739.1 2342748 R 257310 CDS NP_888740.1 33601180 2660330 complement(2343251..2343493) 1 NC_002927.3 no significant database matches; hypothetical protein 2343493 2660330 BB2197 Bordetella bronchiseptica RB50 hypothetical protein NP_888740.1 2343251 R 257310 CDS NP_888741.1 33601181 2660331 complement(2343690..2344712) 1 NC_002927.3 Similar to Bacteriophage 933W, and Stx2 converting bacteriophage I hypothetical 39.1 kDa protein l0095 SWALL:Q9T208 (EMBL:AF125520) (349 aa) fasta scores: E(): 1.5e-57, 51.17% id in 342 aa, and to Escherichia coli O157:H7 hypothetical protein Z1456 SWALL:Q8X497 (EMBL:AE005296) (347 aa) fasta scores: E(): 1.5e-57, 51.17% id in 342 aa; hypothetical protein 2344712 2660331 BB2198 Bordetella bronchiseptica RB50 hypothetical protein NP_888741.1 2343690 R 257310 CDS NP_888742.1 33601182 2659308 complement(2344851..2345480) 1 NC_002927.3 Similar to Bacteriophage D3 repressor protein CI SWALL:RPC1_BPD3 (SWALL:Q37906) (223 aa) fasta scores: E(): 1.1e-05, 28.67% id in 143 aa, and to Neisseria meningitidis regulator nma1884 SWALL:Q9JTC1 (EMBL:AL162757) (234 aa) fasta scores: E(): 3.9e-06, 28.72% id in 188 aa; phage repressor protein 2345480 2659308 BB2199 Bordetella bronchiseptica RB50 phage repressor protein NP_888742.1 2344851 R 257310 CDS NP_888743.1 33601183 2659309 complement(2345960..2346280) 1 NC_002927.3 no significant database matches; hypothetical protein 2346280 2659309 BB2200 Bordetella bronchiseptica RB50 hypothetical protein NP_888743.1 2345960 R 257310 CDS NP_888744.1 33601184 2659310 complement(2346273..2346971) 1 NC_002927.3 no significant database matches; phage-related membrane protein 2346971 2659310 BB2201 Bordetella bronchiseptica RB50 phage-related membrane protein NP_888744.1 2346273 R 257310 CDS NP_888745.1 33601185 2659132 complement(2346986..2347240) 1 NC_002927.3 no significant database matches; hypothetical protein 2347240 2659132 BB2201A Bordetella bronchiseptica RB50 hypothetical protein NP_888745.1 2346986 R 257310 CDS NP_888746.1 33601186 2659230 complement(2347326..2347490) 1 NC_002927.3 no significant database matches; hypothetical protein 2347490 2659230 BB2202 Bordetella bronchiseptica RB50 hypothetical protein NP_888746.1 2347326 R 257310 CDS NP_888747.1 33601187 2659231 2347578..2347886 1 NC_002927.3 Similar to Ralstonia solanacearum hypothetical protein rsc1905 or rs03473 SWALL:Q8XY58 (EMBL:AL646067) (57 aa) fasta scores: E(): 0.00041, 39.62% id in 53 aa; hypothetical protein 2347886 2659231 BB2203 Bordetella bronchiseptica RB50 hypothetical protein NP_888747.1 2347578 D 257310 CDS NP_888748.1 33601188 2661998 2347889..2348296 1 NC_002927.3 Similar to Bacteriophage lambda protein NinB SWALL:NINB_LAMBD (SWALL:P03765) (146 aa) fasta scores: E(): 1.5e-09, 34.92% id in 126 aa, and to Yersinia pestis phage protein NinB or ypo2089 SWALL:Q8ZER6 (EMBL:AJ414151) (142 aa) fasta scores: E(): 2.1e-12, 47.17% id in 106 aa; hypothetical protein 2348296 ninB 2661998 ninB Bordetella bronchiseptica RB50 hypothetical protein NP_888748.1 2347889 D 257310 CDS NP_888749.1 33601189 2661288 2348296..2348745 1 NC_002927.3 Similar to Bacteriophage T7 hypothetical gene 7.7 protein 7.7 SWALL:Y77_BPT7 (SWALL:P03796) (130 aa) fasta scores: E(): 1.6e-11, 34.32% id in 134 aa, and to Ralstonia solanacearum bacteriophage-related protein rsc3236 or rs02453 SWALL:Q8XUF2 (EMBL:AL646074) (183 aa) fasta scores: E(): 1e-15, 41.06% id in 151 aa; hypothetical protein 2348745 2661288 BB2205 Bordetella bronchiseptica RB50 hypothetical protein NP_888749.1 2348296 D 257310 CDS NP_888750.1 33601190 2661289 2348742..2349158 1 NC_002927.3 Similar to Bacteriophage phiE125 gp63 63 SWALL:Q8W6N7 (EMBL:AF447491) (112 aa) fasta scores: E(): 6.7e-12, 45.09% id in 102 aa, and to Escherichia coli, and Bacteriophage 82 hypothetical protein ybco in lambdoid dlp12 prophage region ybco or b0549 SWALL:YBCO_ECOLI (SWALL:Q47271) (96 aa) fasta scores: E(): 0.73, 37.66% id in 77 aa; hypothetical protein 2349158 2661289 BB2206 Bordetella bronchiseptica RB50 hypothetical protein NP_888750.1 2348742 D 257310 CDS NP_888751.1 33601191 2661306 2349158..2349982 1 NC_002927.3 Similar to Salmonella typhi hypothetical protein Sty2063 SWALL:Q8Z5Z8 (EMBL:AL627272) (262 aa) fasta scores: E(): 1.5e-07, 24.43% id in 266 aa, and to Escherichia coli O157:H7 hypothetical protein z2397 z2397 or ecs1944 SWALL:Q8X8R8 (EMBL:AE005370) (262 aa) fasta scores: E(): 1.7e-06, 25.46% id in 267 aa; hypothetical protein 2349982 2661306 BB2207 Bordetella bronchiseptica RB50 hypothetical protein NP_888751.1 2349158 D 257310 CDS NP_888752.1 33601192 2661307 2349979..2350350 1 NC_002927.3 no significant database matches; hypothetical protein 2350350 2661307 BB2208 Bordetella bronchiseptica RB50 hypothetical protein NP_888752.1 2349979 D 257310 CDS NP_888753.1 33601193 2661308 2350347..2351288 1 NC_002927.3 no significant database matches; hypothetical protein 2351288 2661308 BB2209 Bordetella bronchiseptica RB50 hypothetical protein NP_888753.1 2350347 D 257310 CDS NP_888754.1 33601194 2658976 2351285..2351968 1 NC_002927.3 Similar to bacteriophage WO hypothetical 16.7 kDa protein gp11 SWALL:Q9JMN0 (EMBL:AB036666) (151 aa) fasta scores: E(): 1.7e-13, 36.61% id in 142 aa, and to Ralstonia solanacearum bacteriophage-related protein rsc3228 or rs02445 SWALL:Q8XUG0 (EMBL:AL646074) (154 aa) fasta scores: E(): 1.1e-21, 46.35% id in 151 aa; hypothetical protein 2351968 2658976 BB2210 Bordetella bronchiseptica RB50 hypothetical protein NP_888754.1 2351285 D 257310 CDS NP_888755.1 33601195 2659005 2351965..2352168 1 NC_002927.3 no significant database matches; hypothetical protein 2352168 2659005 BB2211 Bordetella bronchiseptica RB50 hypothetical protein NP_888755.1 2351965 D 257310 CDS NP_888756.1 33601196 2659006 2352165..2352605 1 NC_002927.3 no significant database matches; hypothetical protein 2352605 2659006 BB2212 Bordetella bronchiseptica RB50 hypothetical protein NP_888756.1 2352165 D 257310 CDS NP_888757.1 33601197 2659007 2352924..2353295 1 NC_002927.3 Similar to Lactobacillus delbrueckii DNA binding protein SWALL:Q8VN11 (EMBL:AJ421486) (112 aa) fasta scores: E(): 0.0039, 31.81% id in 88 aa; phage-related DNA binding protein 2353295 2659007 BB2213 Bordetella bronchiseptica RB50 phage-related DNA binding protein NP_888757.1 2352924 D 257310 CDS NP_888758.1 33601198 2662058 2353282..2354559 1 NC_002927.3 Similar to Bacillus subtilis PbsX phage terminase large subunit XtmB SWALL:XTMB_BACSU (SWALL:P39786) (433 aa) fasta scores: E(): 0.2, 21.58% id in 417 aa, and to Yersinia pestis hypothetical 47.8 kDa protein y1030 or ypmt1.24C SWALL:O68741 (EMBL:AF074611) (418 aa) fasta scores: E(): 2.8e-17, 27.75% id in 436 aa; phage terminase 2354559 2662058 BB2214 Bordetella bronchiseptica RB50 phage terminase NP_888758.1 2353282 D 257310 CDS NP_888759.1 33601199 2659009 2354562..2355980 1 NC_002927.3 Similar to Bacteriophage MB78 60 kDa protein gp62 SWALL:Q9T0Q3 (EMBL:Y19202) (540 aa) fasta scores: E(): 2.1e-31, 31.2% id in 455 aa; hypothetical protein 2355980 2659009 BB2215 Bordetella bronchiseptica RB50 hypothetical protein NP_888759.1 2354562 D 257310 CDS NP_888760.1 33601200 2659638 2356009..2357061 1 NC_002927.3 Similar to bacteriophage phi ETA orf42 SWALL:Q9G003 (EMBL:AP001553) (320 aa) fasta scores: E(): 0.89, 23.1% id in 264 aa, and to Yersinia pestis hypothetical phage protein Ypo2108 ypo2108 SWALL:Q8ZEQ2 (EMBL:AJ414151) (370 aa) fasta scores: E(): 4.2e-52, 43.17% id in 359 aa; hypothetical protein 2357061 2659638 BB2216 Bordetella bronchiseptica RB50 hypothetical protein NP_888760.1 2356009 D 257310 CDS NP_888761.1 33601201 2659639 2357061..2357309 1 NC_002927.3 no significant database matches; hypothetical protein 2357309 2659639 BB2217 Bordetella bronchiseptica RB50 hypothetical protein NP_888761.1 2357061 D 257310 CDS NP_888762.1 33601202 2659640 2357433..2358035 1 NC_002927.3 no significant database matches; hypothetical protein 2358035 2659640 BB2218 Bordetella bronchiseptica RB50 hypothetical protein NP_888762.1 2357433 D 257310 CDS NP_888763.1 33601203 2659713 2358062..2359030 1 NC_002927.3 Similar to Yersinia pestis phage protein ypo2110 SWALL:Q8ZEQ0 (EMBL:AJ414151) (401 aa) fasta scores: E(): 1.1e-09, 27.98% id in 318 aa; no significant database matches; hypothetical protein 2359030 2659713 BB2219 Bordetella bronchiseptica RB50 hypothetical protein NP_888763.1 2358062 D 257310 CDS NP_888764.1 33601204 2659714 2359040..2359297 1 NC_002927.3 no significant database matches; hypothetical protein 2359297 2659714 BB2220 Bordetella bronchiseptica RB50 hypothetical protein NP_888764.1 2359040 D 257310 CDS NP_888765.1 33601205 2659715 2359360..2359842 1 NC_002927.3 Similar to Yersinia pestis hypothetical phage protein Ypo2111 SWALL:Q8ZEP9 (EMBL:AJ414151) (176 aa) fasta scores: E(): 4.1, 26.94% id in 167 aa; hypothetical protein 2359842 2659715 BB2221 Bordetella bronchiseptica RB50 hypothetical protein NP_888765.1 2359360 D 257310 CDS NP_888766.1 33601206 2662070 2359844..2360044 1 NC_002927.3 no significant database matches; hypothetical protein 2360044 2662070 BB2222 Bordetella bronchiseptica RB50 hypothetical protein NP_888766.1 2359844 D 257310 CDS NP_888767.1 33601207 2662071 2360044..2360439 1 NC_002927.3 Similar to Rhizobium loti hypothetical protein Mlr8012 SWALL:Q984G8 (EMBL:AP003013) (130 aa) fasta scores: E(): 6.8, 26.82% id in 123 aa; hypothetical protein 2360439 2662071 BB2223 Bordetella bronchiseptica RB50 hypothetical protein NP_888767.1 2360044 D 257310 CDS NP_888768.1 33601208 2662072 2360436..2360834 1 NC_002927.3 Weakly similar to Yersinia pestis hypothetical phage protein Ypo2114 SWALL:Q8ZEP6 (EMBL:AJ414151) (194 aa) fasta scores: E(): 1.8e-08, 36.93% id in 111 aa; hypothetical protein 2360834 2662072 BB2224 Bordetella bronchiseptica RB50 hypothetical protein NP_888768.1 2360436 D 257310 CDS NP_888769.1 33601209 2662182 2360831..2361253 1 NC_002927.3 Similar to Yersinia pestis hypothetical phage protein Ypo2115 SWALL:Q8ZEP5 (EMBL:AJ414151) (135 aa) fasta scores: E(): 5.8e-10, 34.58% id in 133 aa, and to Rhizobium loti hypothetical protein Mlr8015 SWALL:Q984G5 (EMBL:AP003013) (137 aa) fasta scores: E(): 8.8e-06, 33.91% id in 115 aa; hypothetical protein 2361253 2662182 BB2225 Bordetella bronchiseptica RB50 hypothetical protein NP_888769.1 2360831 D 257310 CDS NP_888770.1 33601210 2662183 2361261..2361761 1 NC_002927.3 Similar to Bacteriophage phiYeO3-12 1.45 protein 1.45 SWALL:Q9T140 (EMBL:AJ251805) (157 aa) fasta scores: E(): 2.6e-06, 36.06% id in 122 aa, and to Escherichia coli O157:H7 hypothetical protein z3935 z3935 or ecs3504 SWALL:Q8X989 (EMBL:AE005493) (201 aa) fasta scores: E(): 2.1e-14, 37.5% id in 144 aa; hypothetical protein 2361761 2662183 BB2226 Bordetella bronchiseptica RB50 hypothetical protein NP_888770.1 2361261 D 257310 CDS NP_888771.1 33601211 2662184 2362016..2362531 1 NC_002927.3 Similar to Ralstonia solanacearum hypothetical protein rsc1689 or rs04083 SWALL:Q8XYR9 (EMBL:AL646065) (217 aa) fasta scores: E(): 4.3e-22, 41.07% id in 168 aa; hypothetical protein 2362531 2662184 BB2227 Bordetella bronchiseptica RB50 hypothetical protein NP_888771.1 2362016 D 257310 CDS NP_888772.1 33601212 2659329 2362544..2362873 1 NC_002927.3 Similar to Yersinia pestis hypothetical phage protein Ypo2117 SWALL:Q8ZEP3 (EMBL:AJ414151) (103 aa) fasta scores: E(): 2.7e-07, 36.79% id in 106 aa; hypothetical protein 2362873 2659329 BB2228 Bordetella bronchiseptica RB50 hypothetical protein NP_888772.1 2362544 D 257310 CDS NP_888773.1 33601213 2659244 2362891..2363181 1 NC_002927.3 Similar to Yersinia pestis hypothetical phage protein Ypo2118 SWALL:Q8ZEP2 (EMBL:AJ414151) (73 aa) fasta scores: E(): 1.3e-08, 52.05% id in 73 aa; hypothetical protein 2363181 2659244 BB2229 Bordetella bronchiseptica RB50 hypothetical protein NP_888773.1 2362891 D 257310 CDS NP_888774.1 33601214 2659245 2363209..2365809 1 NC_002927.3 Similar to Ralstonia solanacearum probable phage hk97 tail length tape measure-related protein rsc1690 or rs04085 SWALL:Q8XYR8 (EMBL:AL646065) (957 aa) fasta scores: E(): 1.4e-47, 35.26% id in 913 aa, and to Bacteriophage N15 gp16 gene 16 SWALL:O64330 (EMBL:AF064539) (838 aa) fasta scores: E(): 1.2e-28, 28.1% id in 861 aa; phage tail protein 2365809 2659245 BB2230 Bordetella bronchiseptica RB50 phage tail protein NP_888774.1 2363209 D 257310 CDS NP_888775.1 33601215 2663941 2365819..2366178 1 NC_002927.3 Similar to Bacteriophage D3 Orf21 SWALL:Q9MCA0 (EMBL:AF165214) (159 aa) fasta scores: E(): 0.00045, 31.37% id in 102 aa; hypothetical protein 2366178 2663941 BB2231 Bordetella bronchiseptica RB50 hypothetical protein NP_888775.1 2365819 D 257310 CDS NP_888776.1 33601216 2663942 2366185..2366778 1 NC_002927.3 Similar to Bacteriophage D3 Orf22 SWALL:Q9MC99 (EMBL:AF165214) (163 aa) fasta scores: E(): 0.1, 25.43% id in 173 aa; hypothetical protein 2366778 2663942 BB2232 Bordetella bronchiseptica RB50 hypothetical protein NP_888776.1 2366185 D 257310 CDS NP_888777.1 33601217 2659214 2366775..2367164 1 NC_002927.3 Similar to Bacteriophage D3 Orf25 SWALL:Q9MC96 (EMBL:AF165214) (135 aa) fasta scores: E(): 0.00047, 30.46% id in 128 aa; hypothetical protein 2367164 2659214 BB2233 Bordetella bronchiseptica RB50 hypothetical protein NP_888777.1 2366775 D 257310 CDS NP_888778.1 33601218 2659215 2367157..2371113 1 NC_002927.3 Weakly similar to Bacteriophage D3 Orf26 orf26 SWALL:Q9MC95 (EMBL:AF165214) (909 aa) fasta scores: E(): 4.8e-23, 25.98% id in 689 aa; hypothetical protein 2371113 2659215 BB2234 Bordetella bronchiseptica RB50 hypothetical protein NP_888778.1 2367157 D 257310 CDS NP_888779.1 33601219 2660015 2371118..2371534 1 NC_002927.3 no significant database matches; hypothetical protein 2371534 2660015 BB2235 Bordetella bronchiseptica RB50 hypothetical protein NP_888779.1 2371118 D 257310 CDS NP_888780.1 33601220 2660016 2371753..2372016 1 NC_002927.3 no significant database matches; hypothetical protein 2372016 2660016 BB2237 Bordetella bronchiseptica RB50 hypothetical protein NP_888780.1 2371753 D 257310 CDS NP_888781.1 33601221 2663947 2372016..2372828 1 NC_002927.3 no significant database matches; hypothetical protein 2372828 2663947 BB2238 Bordetella bronchiseptica RB50 hypothetical protein NP_888781.1 2372016 D 257310 CDS NP_888782.1 33601222 2663948 2372833..2373075 1 NC_002927.3 Similar to Serratia marcescens phage-holin analog protein regA SWALL:Q54422 (EMBL:U31763) (88 aa) fasta scores: E(): 0.97, 30.13% id in 73 aa, and to Haemophilus somnus holin SWALL:Q48281 (EMBL:U28154) (74 aa) fasta scores: E(): 2.7, 28.57% id in 63 aa; hypothetical protein 2373075 2663948 BB2239 Bordetella bronchiseptica RB50 hypothetical protein NP_888782.1 2372833 D 257310 CDS NP_888783.1 33601223 2662106 2373054..2373605 1 NC_002927.3 Similar to Escherichia coli probable lysozyme from lambdoid prophage qin ydfq or b1554 SWALL:LYCW_ECOLI (SWALL:P76159) (177 aa) fasta scores: E(): 0.044, 27.56% id in 185 aa, and to Bacteriophage phi-Ea1h lysozyme lyZ SWALL:Q9FZS7 (EMBL:AJ278614) (178 aa) fasta scores: E(): 0.081, 26.7% id in 191 aa; phage lysozyme 2373605 2662106 BB2240 Bordetella bronchiseptica RB50 phage lysozyme NP_888783.1 2373054 D 257310 CDS NP_888784.1 33601224 2662107 2373605..2374120 1 NC_002927.3 Similar to Salmonella typhimurium homology to phage-tail assembly proteins stm1869 SWALL:Q8ZNX8 (EMBL:AE008783) (177 aa) fasta scores: E(): 1.6e-08, 35.92% id in 167 aa, and to Bacteriophage N15 protein gp55 precursor 55 SWALL:VG55_BPN15 (SWALL:O64363) (181 aa) fasta scores: E(): 0.00029, 32.14% id in 168 aa; hypothetical protein 2374120 2662107 BB2241 Bordetella bronchiseptica RB50 hypothetical protein NP_888784.1 2373605 D 257310 CDS NP_888785.1 33601225 2660006 complement(2374117..2374398) 1 NC_002927.3 no significant database matches; hypothetical protein 2374398 2660006 BB2242 Bordetella bronchiseptica RB50 hypothetical protein NP_888785.1 2374117 R 257310 CDS NP_888786.1 33601226 2660007 complement(2374398..2375027) 1 NC_002927.3 no significant database matches; phage-like hypothetical protein 2375027 2660007 BB2243 Bordetella bronchiseptica RB50 phage-like hypothetical protein NP_888786.1 2374398 R 257310 CDS NP_888787.1 33601227 2660008 complement(2375233..2375904) 1 NC_002927.3 Similar to Bacteriophage SPBc2 YoqW protein yoqW SWALL:O64131 (EMBL:AF020713) (224 aa) fasta scores: E(): 6.8e-10, 29.69% id in 229 aa, and to Salmonella typhimurium gifsy-2 prophage stm1053 SWALL:Q8ZQ78 (EMBL:AE008745) (208 aa) fasta scores: E(): 9.1e-17, 40% id in 185 aa; hypothetical protein 2375904 2660008 BB2244 Bordetella bronchiseptica RB50 hypothetical protein NP_888787.1 2375233 R 257310 CDS NP_888788.1 33601228 2662186 complement(2376231..2376560) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1766; hypothetical protein 2376560 2662186 BB2245 Bordetella bronchiseptica RB50 hypothetical protein NP_888788.1 2376231 R 257310 CDS NP_888789.1 33601229 2659247 2376943..2378190 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1767; autotransporter 2378190 phg 2659247 phg Bordetella bronchiseptica RB50 autotransporter NP_888789.1 2376943 D 257310 CDS NP_888790.1 33601230 2659194 2378265..2378546 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1768; hypothetical protein 2378546 2659194 BB2247 Bordetella bronchiseptica RB50 hypothetical protein NP_888790.1 2378265 D 257310 CDS NP_888791.1 33601231 2662616 2378588..2378908 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1769; hypothetical protein 2378908 2662616 BB2248 Bordetella bronchiseptica RB50 hypothetical protein NP_888791.1 2378588 D 257310 CDS NP_888792.1 33601232 2662617 2379173..2379418 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1770; cold shock-like protein 2379418 cspA 2662617 cspA Bordetella bronchiseptica RB50 cold shock-like protein NP_888792.1 2379173 D 257310 CDS NP_888793.1 33601233 2661513 2379502..2380068 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1771; hypothetical protein 2380068 2661513 BB2250 Bordetella bronchiseptica RB50 hypothetical protein NP_888793.1 2379502 D 257310 CDS NP_888794.1 33601234 2661514 2380414..2380620 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1772; cold shock-like protein 2380620 cspA 2661514 cspA Bordetella bronchiseptica RB50 cold shock-like protein NP_888794.1 2380414 D 257310 CDS NP_888795.1 33601235 2660585 complement(2380718..2381296) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1773; hypothetical protein 2381296 2660585 BB2252 Bordetella bronchiseptica RB50 hypothetical protein NP_888795.1 2380718 R 257310 CDS NP_888796.1 33601236 2660871 2381475..2382785 1 NC_002927.3 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 2382785 tig 2660871 tig Bordetella bronchiseptica RB50 trigger factor NP_888796.1 2381475 D 257310 CDS NP_888797.1 33601237 2661248 2382788..2383441 1 NC_002927.3 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 2383441 clpP 2661248 clpP Bordetella bronchiseptica RB50 ATP-dependent Clp protease proteolytic subunit NP_888797.1 2382788 D 257310 CDS NP_888798.2 161609274 2659700 2383546..2384850 1 NC_002927.3 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding protein ClpX 2384850 clpX 2659700 clpX Bordetella bronchiseptica RB50 ATP-dependent protease ATP-binding protein ClpX NP_888798.2 2383546 D 257310 CDS NP_888799.1 33601239 2659314 2385039..2387492 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1777; ATP-dependent protease La 2387492 lon 2659314 lon Bordetella bronchiseptica RB50 ATP-dependent protease La NP_888799.1 2385039 D 257310 CDS NP_888800.1 33601240 2660633 complement(2387624..2388574) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1778; LysR family transcriptional regulator 2388574 2660633 BB2257 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_888800.1 2387624 R 257310 CDS NP_888801.1 33601241 2659939 2388802..2390025 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1779; hypothetical protein 2390025 2659939 BB2258 Bordetella bronchiseptica RB50 hypothetical protein NP_888801.1 2388802 D 257310 CDS NP_888802.1 33601242 2659945 2390091..2391062 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1780; hypothetical protein 2391062 2659945 BB2259 Bordetella bronchiseptica RB50 hypothetical protein NP_888802.1 2390091 D 257310 CDS NP_888803.1 33601243 2661420 2391067..2391531 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1781; hypothetical protein 2391531 2661420 BB2260 Bordetella bronchiseptica RB50 hypothetical protein NP_888803.1 2391067 D 257310 CDS NP_888804.1 33601244 2661446 2391545..2392348 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1782; enoyl-CoA hydratase 2392348 2661446 BB2261 Bordetella bronchiseptica RB50 enoyl-CoA hydratase NP_888804.1 2391545 D 257310 CDS NP_888805.1 33601245 2661492 2392345..2392776 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1783; hypothetical protein 2392776 2661492 BB2262 Bordetella bronchiseptica RB50 hypothetical protein NP_888805.1 2392345 D 257310 CDS NP_888806.1 33601246 2661493 2392773..2393930 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1784; thiolase 2393930 2661493 BB2263 Bordetella bronchiseptica RB50 thiolase NP_888806.1 2392773 D 257310 CDS NP_888807.1 33601247 2661573 2393937..2394728 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1785; 3-oxoacyl-ACP reductase 2394728 fabG 2661573 fabG Bordetella bronchiseptica RB50 3-oxoacyl-ACP reductase NP_888807.1 2393937 D 257310 CDS NP_888808.1 33601248 2659413 2394725..2395888 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1786; acyl-CoA dehydrogenase 2395888 2659413 BB2265 Bordetella bronchiseptica RB50 acyl-CoA dehydrogenase NP_888808.1 2394725 D 257310 CDS NP_888809.1 33601249 2660437 2395910..2396905 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1787; acyl-CoA dehydrogenase 2396905 2660437 BB2266 Bordetella bronchiseptica RB50 acyl-CoA dehydrogenase NP_888809.1 2395910 D 257310 CDS NP_888810.1 33601250 2660639 2396902..2397618 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1788; 3-oxoadipate CoA-transferase subunit A 2397618 pcaI 2660639 pcaI Bordetella bronchiseptica RB50 3-oxoadipate CoA-transferase subunit A NP_888810.1 2396902 D 257310 CDS NP_888811.1 33601251 2660667 2397611..2398252 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1789; 3-oxoadipate CoA-transferase subunit B 2398252 pcaJ 2660667 pcaJ Bordetella bronchiseptica RB50 3-oxoadipate CoA-transferase subunit B NP_888811.1 2397611 D 257310 CDS NP_888812.1 33601252 2660894 2398287..2399249 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1790; hypothetical protein 2399249 2660894 BB2269 Bordetella bronchiseptica RB50 hypothetical protein NP_888812.1 2398287 D 257310 CDS NP_888813.1 33601253 2660895 2399520..2401199 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1793; autotransporter 2401199 2660895 BB2270 Bordetella bronchiseptica RB50 autotransporter NP_888813.1 2399520 D 257310 CDS NP_888814.1 33601254 2660925 complement(2401510..2402238) 1 NC_002927.3 Represses a number of genes involved in the response to DNA damage; LexA repressor 2402238 lexA 2660925 lexA Bordetella bronchiseptica RB50 LexA repressor NP_888814.1 2401510 R 257310 CDS NP_888815.1 33601255 2660935 complement(2402289..2403491) 1 NC_002927.3 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 2403491 tyrB 2660935 tyrB Bordetella bronchiseptica RB50 aromatic amino acid aminotransferase NP_888815.1 2402289 R 257310 CDS NP_888816.1 33601256 2659059 2403569..2405596 1 NC_002927.3 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 2405596 uvrB 2659059 uvrB Bordetella bronchiseptica RB50 excinuclease ABC subunit B NP_888816.1 2403569 D 257310 CDS NP_888817.1 33601257 2661165 2405858..2406349 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1797; low molecular weight protein-tyrosine-phosphatase 2406349 ptpA 2661165 ptpA Bordetella bronchiseptica RB50 low molecular weight protein-tyrosine-phosphatase NP_888817.1 2405858 D 257310 CDS NP_888818.1 33601258 2661300 2406565..2407077 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1798; DNA-binding protein 2407077 2661300 BB2275 Bordetella bronchiseptica RB50 DNA-binding protein NP_888818.1 2406565 D 257310 CDS NP_888819.1 33601259 2659751 2407095..2408306 1 NC_002927.3 catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis; cysteine desulfurase 2408306 iscS 2659751 iscS Bordetella bronchiseptica RB50 cysteine desulfurase NP_888819.1 2407095 D 257310 CDS NP_888820.1 33601260 2659767 2408340..2408750 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1800; scaffold protein 2408750 iscU 2659767 iscU Bordetella bronchiseptica RB50 scaffold protein NP_888820.1 2408340 D 257310 CDS NP_888821.1 33601261 2662145 2408752..2409075 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1801; [Fe-S] cluster formation/repair protein 2409075 iscA 2662145 iscA Bordetella bronchiseptica RB50 [Fe-S] cluster formation/repair protein NP_888821.1 2408752 D 257310 CDS NP_888822.1 33601262 2661321 2409078..2409590 1 NC_002927.3 J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone; may function in biogenesis of iron-sulfur proteins; co-chaperone HscB 2409590 hscB 2661321 hscB Bordetella bronchiseptica RB50 co-chaperone HscB NP_888822.1 2409078 D 257310 CDS NP_888823.2 161609273 2661336 2409720..2411582 1 NC_002927.3 involved in the maturation of iron-sulfur cluster-containing proteins; chaperone protein HscA 2411582 hscA 2661336 hscA Bordetella bronchiseptica RB50 chaperone protein HscA NP_888823.2 2409720 D 257310 CDS NP_888824.1 33601264 2660025 2411592..2411933 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1804; ferredoxin, 2Fe-2S 2411933 fdx 2660025 fdx Bordetella bronchiseptica RB50 ferredoxin, 2Fe-2S NP_888824.1 2411592 D 257310 CDS NP_888825.1 33601265 2660669 2411933..2412127 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1805; hypothetical protein 2412127 2660669 BB2282 Bordetella bronchiseptica RB50 hypothetical protein NP_888825.1 2411933 D 257310 CDS NP_888826.1 33601266 2660670 2412252..2413145 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1806; hypothetical protein 2413145 2660670 BB2283 Bordetella bronchiseptica RB50 hypothetical protein NP_888826.1 2412252 D 257310 CDS NP_888827.1 33601267 2660686 complement(2413168..2413977) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1808; enoyl-CoA hydratase 2413977 2660686 BB2284 Bordetella bronchiseptica RB50 enoyl-CoA hydratase NP_888827.1 2413168 R 257310 CDS NP_888828.1 33601268 2660858 2414247..2415071 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1094; high-affinity branched-chain amino acid transport ATP-binding protein 2415071 livG 2660858 livG Bordetella bronchiseptica RB50 high-affinity branched-chain amino acid transport ATP-binding protein NP_888828.1 2414247 D 257310 CDS NP_888829.1 33601269 2660839 2415071..2415949 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1095; high-affinity branched-chain amino acid transport system permease 2415949 livH 2660839 livH Bordetella bronchiseptica RB50 high-affinity branched-chain amino acid transport system permease NP_888829.1 2415071 D 257310 CDS NP_888830.1 33601270 2660880 2415953..2416990 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1096; high-affinity branched-chain amino acid transport system permease 2416990 livM 2660880 livM Bordetella bronchiseptica RB50 high-affinity branched-chain amino acid transport system permease NP_888830.1 2415953 D 257310 CDS NP_888831.1 33601271 2662164 2417028..2418206 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1097; amino acids binding protein 2418206 livK 2662164 livK Bordetella bronchiseptica RB50 amino acids binding protein NP_888831.1 2417028 D 257310 CDS NP_888832.1 33601272 2659403 2418214..2419029 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1098; high-affinity branched-chain amino acid transport ATP-binding protein 2419029 livF 2659403 livF Bordetella bronchiseptica RB50 high-affinity branched-chain amino acid transport ATP-binding protein NP_888832.1 2418214 D 257310 CDS NP_888833.1 33601273 2659172 2419026..2420891 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1099; long-chain fatty-acid--CoA ligase 2420891 2659172 BB2290 Bordetella bronchiseptica RB50 long-chain fatty-acid--CoA ligase NP_888833.1 2419026 D 257310 CDS NP_888834.1 33601274 2660388 2420970..2421602 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1100; TetR family transcriptional regulator 2421602 2660388 BB2291 Bordetella bronchiseptica RB50 TetR family transcriptional regulator NP_888834.1 2420970 D 257310 CDS NP_888835.1 33601275 2663898 complement(2421599..2421934) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1101; hypothetical protein 2421934 2663898 BB2292 Bordetella bronchiseptica RB50 hypothetical protein NP_888835.1 2421599 R 257310 CDS NP_888836.1 33601276 2663917 complement(2421951..2423471) 1 NC_002927.3 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 2423471 lysS 2663917 lysS Bordetella bronchiseptica RB50 lysyl-tRNA synthetase NP_888836.1 2421951 R 257310 CDS NP_888837.1 33601277 2660640 complement(2423478..2424233) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1103; short chain dehydrogenase 2424233 2660640 BB2294 Bordetella bronchiseptica RB50 short chain dehydrogenase NP_888837.1 2423478 R 257310 CDS NP_888838.1 33601278 2660706 complement(join(2424263..2425285,2425287..2425367)) 1 NC_002927.3 recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1; peptide chain release factor 2 2425367 prfB 2660706 prfB Bordetella bronchiseptica RB50 peptide chain release factor 2 NP_888838.1 2424263 R 257310 CDS NP_888839.1 33601279 2660916 complement(2425470..2427038) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1105; single-stranded-DNA-specific exonuclease 2427038 recJ 2660916 recJ Bordetella bronchiseptica RB50 single-stranded-DNA-specific exonuclease NP_888839.1 2425470 R 257310 CDS NP_888840.1 33601280 2662230 complement(2427152..2428129) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1106; hypothetical protein 2428129 2662230 BB2297 Bordetella bronchiseptica RB50 hypothetical protein NP_888840.1 2427152 R 257310 CDS NP_888841.1 33601281 2661140 2428187..2429419 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1107; lipoprotein releasing system transmembrane protein 2429419 lolC 2661140 lolC Bordetella bronchiseptica RB50 lipoprotein releasing system transmembrane protein NP_888841.1 2428187 D 257310 CDS NP_888842.1 33601282 2660047 2429412..2430107 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1108; lipoprotein releasing system ATP-binding protein 2430107 lolD 2660047 lolD Bordetella bronchiseptica RB50 lipoprotein releasing system ATP-binding protein NP_888842.1 2429412 D 257310 CDS NP_888843.1 33601283 2659613 2430141..2430968 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1109; deoxyribonuclease 2430968 2659613 BB2300 Bordetella bronchiseptica RB50 deoxyribonuclease NP_888843.1 2430141 D 257310 CDS NP_888844.1 33601284 2662187 2431250..2434480 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1110; serine protease 2434480 sphB3 2662187 sphB3 Bordetella bronchiseptica RB50 serine protease NP_888844.1 2431250 D 257310 CDS NP_888845.1 33601285 2660208 2435248..2435424 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1111; no significant database matches; hypothetical protein 2435424 2660208 BB2302 Bordetella bronchiseptica RB50 hypothetical protein NP_888845.1 2435248 D 257310 CDS NP_888846.1 33601286 2659760 2435715..2440451 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1112; outer membrane ligand binding protein 2440451 bipA 2659760 bipA Bordetella bronchiseptica RB50 outer membrane ligand binding protein NP_888846.1 2435715 D 257310 CDS NP_888847.1 33601287 2660108 2440624..2443098 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1113; competence protein 2443098 2660108 BB2304 Bordetella bronchiseptica RB50 competence protein NP_888847.1 2440624 D 257310 CDS NP_888848.1 33601288 2659768 2443098..2444066 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1115; hydrolase 2444066 2659768 BB2305 Bordetella bronchiseptica RB50 hydrolase NP_888848.1 2443098 D 257310 CDS NP_888849.1 33601289 2659909 2444136..2444981 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1116; hypothetical protein 2444981 2659909 BB2306 Bordetella bronchiseptica RB50 hypothetical protein NP_888849.1 2444136 D 257310 CDS NP_888850.1 33601290 2659950 2445049..2445603 1 NC_002927.3 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreB 2445603 greB 2659950 greB Bordetella bronchiseptica RB50 transcription elongation factor GreB NP_888850.1 2445049 D 257310 CDS NP_888851.1 33601291 2661392 complement(2445794..2446822) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2671; hypothetical protein 2446822 2661392 BB2308 Bordetella bronchiseptica RB50 hypothetical protein NP_888851.1 2445794 R 257310 CDS NP_888852.1 33601292 2661393 complement(2446902..2448200) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2670; membrane permease 2448200 2661393 BB2309 Bordetella bronchiseptica RB50 membrane permease NP_888852.1 2446902 R 257310 CDS NP_888853.1 33601293 2660708 complement(2448197..2448778) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2669; integral membrane protein 2448778 2660708 BB2310 Bordetella bronchiseptica RB50 integral membrane protein NP_888853.1 2448197 R 257310 CDS NP_888854.1 33601294 2660940 2449091..2453137 1 NC_002927.3 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase 2453137 purL 2660940 purL Bordetella bronchiseptica RB50 phosphoribosylformylglycinamidine synthase NP_888854.1 2449091 D 257310 CDS NP_888855.1 33601295 2661997 2453379..2462999 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2667; adhesin 2462999 fhaS 2661997 fhaS Bordetella bronchiseptica RB50 adhesin NP_888855.1 2453379 D 257310 CDS NP_888856.1 33601296 2659285 2463092..2464564 1 NC_002927.3 peptidase 2464564 2659285 BB2313 Bordetella bronchiseptica RB50 peptidase NP_888856.1 2463092 D 257310 CDS NP_888857.1 33601297 2659286 2464598..2465149 1 NC_002927.3 hypothetical protein 2465149 2659286 BB2314 Bordetella bronchiseptica RB50 hypothetical protein NP_888857.1 2464598 D 257310 CDS NP_888858.1 33601298 2662053 complement(2465264..2466556) 1 NC_002927.3 acyl coenzyme A thioester hydrolase 2466556 2662053 BB2315 Bordetella bronchiseptica RB50 acyl coenzyme A thioester hydrolase NP_888858.1 2465264 R 257310 CDS NP_888859.1 33601299 2662054 complement(2466568..2467554) 1 NC_002927.3 hypothetical protein 2467554 2662054 BB2316 Bordetella bronchiseptica RB50 hypothetical protein NP_888859.1 2466568 R 257310 CDS NP_888860.1 33601300 2660058 complement(2467752..2468588) 1 NC_002927.3 hypothetical protein 2468588 2660058 BB2317 Bordetella bronchiseptica RB50 hypothetical protein NP_888860.1 2467752 R 257310 CDS NP_888861.1 33601301 2660059 2468880..2469677 1 NC_002927.3 hypothetical protein 2469677 2660059 BB2318 Bordetella bronchiseptica RB50 hypothetical protein NP_888861.1 2468880 D 257310 CDS NP_888862.1 33601302 2662185 2469674..2470489 1 NC_002927.3 thiol:disulfide interchange protein 2470489 2662185 BB2319 Bordetella bronchiseptica RB50 thiol:disulfide interchange protein NP_888862.1 2469674 D 257310 CDS NP_888863.1 33601303 2663953 2470519..2471355 1 NC_002927.3 Involved in disulfide bond formation; disulfide isomerase/thiol-disulfide oxidase 2471355 dsbG 2663953 dsbG Bordetella bronchiseptica RB50 disulfide isomerase/thiol-disulfide oxidase NP_888863.1 2470519 D 257310 CDS NP_888864.1 33601304 2660522 2471352..2471669 1 NC_002927.3 hypothetical protein 2471669 2660522 BB2321 Bordetella bronchiseptica RB50 hypothetical protein NP_888864.1 2471352 D 257310 CDS NP_888865.1 33601305 2660523 complement(2472130..2472804) 1 NC_002927.3 hypothetical protein 2472804 2660523 BB2322 Bordetella bronchiseptica RB50 hypothetical protein NP_888865.1 2472130 R 257310 CDS NP_888866.1 33601306 2660524 2473117..2474244 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2629; transcriptional regulator 2474244 2660524 BB2323 Bordetella bronchiseptica RB50 transcriptional regulator NP_888866.1 2473117 D 257310 CDS NP_888867.1 33601307 2659789 2474494..2476650 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2627; autotransporter 2476650 2659789 BB2324 Bordetella bronchiseptica RB50 autotransporter NP_888867.1 2474494 D 257310 CDS NP_888868.1 33601308 2659794 complement(2476647..2477258) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2626; hypothetical protein 2477258 2659794 BB2325 Bordetella bronchiseptica RB50 hypothetical protein NP_888868.1 2476647 R 257310 CDS NP_888869.1 33601309 2661361 2477481..2478941 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2625; inosine-5'-monophosphate dehydrogenase 2478941 guaB 2661361 guaB Bordetella bronchiseptica RB50 inosine-5'-monophosphate dehydrogenase NP_888869.1 2477481 D 257310 CDS NP_888870.1 33601310 2661990 2479038..2480630 1 NC_002927.3 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 2480630 guaA 2661990 guaA Bordetella bronchiseptica RB50 GMP synthase NP_888870.1 2479038 D 257310 CDS NP_888871.1 33601311 2659218 complement(2481226..2481915) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2621; TetR family transcriptional regulator 2481915 2659218 BB2329 Bordetella bronchiseptica RB50 TetR family transcriptional regulator NP_888871.1 2481226 R 257310 CDS NP_888872.1 33601312 2662239 2481928..2483358 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2620; membrane efflux protein 2483358 2662239 BB2330 Bordetella bronchiseptica RB50 membrane efflux protein NP_888872.1 2481928 D 257310 CDS NP_888873.1 33601313 2659117 complement(2483391..2484647) 1 NC_002927.3 hypothetical protein 2484647 2659117 BB2331 Bordetella bronchiseptica RB50 hypothetical protein NP_888873.1 2483391 R 257310 CDS NP_888874.1 33601314 2659008 2484757..2485203 1 NC_002927.3 transcriptional regulator 2485203 2659008 BB2332 Bordetella bronchiseptica RB50 transcriptional regulator NP_888874.1 2484757 D 257310 CDS NP_888875.1 33601315 2661933 2485289..2486368 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2619; Similar to Pyrococcus abyssi C4-dicarboxylate transporter pab2393 SWALL:Q9V0I5 (EMBL:AJ248285) (339 aa) fasta scores: E(): 1.4e-10, 25.14% id in 350 aa, and to Methanococcus jannaschii hypothetical protein Mj0762 SWALL:Y762_METJA (SWALL:Q58172) (342 aa) fasta scores: E(): 1.1e-14, 25.46% id in 322 aa; C4-dicarboxylate ABC transporter permease 2486368 2661933 BB2333 Bordetella bronchiseptica RB50 C4-dicarboxylate ABC transporter permease NP_888875.1 2485289 D 257310 CDS NP_888876.1 33601316 2660893 complement(2486406..2487632) 1 NC_002927.3 Similar to Pseudomonas aeruginosa transcription regulatory protein OpdE or pa2219 SWALL:OPDE_PSEAE (SWALL:Q01602) (402 aa) fasta scores: E(): 9.5e-112, 77.09% id in 393 aa, and to Xylella fastidiosa transcriptional regulator xf1749 SWALL:Q9PCM9 (EMBL:AE003997) (409 aa) fasta scores: E(): 3.6e-122, 84.42% id in 398 aa; transporter 2487632 opdE 2660893 opdE Bordetella bronchiseptica RB50 transporter NP_888876.1 2486406 R 257310 CDS NP_888877.1 33601317 2660183 complement(2487651..2487782) 1 NC_002927.3 Similar to the C-terminal region of Xylella fastidiosa hypothetical protein Xf1750 SWALL:Q9PCM8 (EMBL:AE003998) (378 aa) fasta scores: E(): 2.4e-06, 71.87% id in 32 aa; hypothetical protein 2487782 2660183 BB2335 Bordetella bronchiseptica RB50 hypothetical protein NP_888877.1 2487651 R 257310 CDS NP_888878.1 33601318 2661848 complement(2487852..2488331) 1 NC_002927.3 Similar to Xylella fastidiosa hypothetical protein Xf1751 xf1751 SWALL:Q9PCM7 (EMBL:AE003998) (167 aa) fasta scores: E(): 3.1e-37, 69.75% id in 162 aa, and to Ralstonia solanacearum hypothetical protein rsc0630 rsc0630 or rs01532 SWALL:Q8Y1Q9 (EMBL:AL646060) (118 aa) fasta scores: E(): 1.1e-18, 52.13% id in 117 aa; hypothetical protein 2488331 2661848 BB2336 Bordetella bronchiseptica RB50 hypothetical protein NP_888878.1 2487852 R 257310 CDS NP_888879.1 33601319 2661849 2488439..2489398 1 NC_002927.3 Similar to Pseudomonas aeruginosa transcriptional regulator pa2220 SWALL:OPRR_PSEAE (SWALL:Q01610) (306 aa) fasta scores: E(): 1.8e-95, 81.35% id in 295 aa, and to Xylella fastidiosa transcriptional regulator xf1752 SWALL:Q9PCM6 (EMBL:AE003998) (324 aa) fasta scores: E(): 1.9e-105, 83.75% id in 314 aa; LysR family transcriptional regulator 2489398 2661849 BB2337 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_888879.1 2488439 D 257310 CDS NP_888880.1 33601320 2659745 complement(2489320..2490729) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2611; transcriptional regulator 2490729 2659745 BB2338 Bordetella bronchiseptica RB50 transcriptional regulator NP_888880.1 2489320 R 257310 CDS NP_888881.1 33601321 2659746 complement(2490790..2492517) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2610; solute transport protein 2492517 2659746 BB2339 Bordetella bronchiseptica RB50 solute transport protein NP_888881.1 2490790 R 257310 CDS NP_888882.1 33601322 2663905 2492629..2493987 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2609; hypothetical protein 2493987 2663905 BB2340 Bordetella bronchiseptica RB50 hypothetical protein NP_888882.1 2492629 D 257310 CDS NP_888883.1 33601323 2659204 complement(2494007..2494912) 1 NC_002927.3 AraC family transcriptional regulator 2494912 2659204 BB2341 Bordetella bronchiseptica RB50 AraC family transcriptional regulator NP_888883.1 2494007 R 257310 CDS NP_888884.1 33601324 2659772 2495196..2496185 1 NC_002927.3 hypothetical protein 2496185 2659772 BB2342 Bordetella bronchiseptica RB50 hypothetical protein NP_888884.1 2495196 D 257310 CDS NP_888885.1 33601325 2661826 2496211..2497302 1 NC_002927.3 hypothetical protein 2497302 2661826 BB2343 Bordetella bronchiseptica RB50 hypothetical protein NP_888885.1 2496211 D 257310 CDS NP_888886.1 33601326 2661827 complement(2497367..2498353) 1 NC_002927.3 Similar to Rhizobium meliloti hypothetical protein ra1058 or sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 5.2e-47, 43.97% id in 332 aa, and to Agrobacterium tumefaciens hypothetical protein atu4727 or agr_l_312 SWALL:Q8U6S9 (EMBL:AE009401) (329 aa) fasta scores: E(): 1.5e-45, 44.23% id in 321 aa; hypothetical protein 2498353 2661827 BB2344 Bordetella bronchiseptica RB50 hypothetical protein NP_888886.1 2497367 R 257310 CDS NP_888887.1 33601327 2659731 2498655..2499653 1 NC_002927.3 hypothetical protein 2499653 2659731 BB2345 Bordetella bronchiseptica RB50 hypothetical protein NP_888887.1 2498655 D 257310 CDS NP_888888.1 33601328 2659732 2499783..2501036 1 NC_002927.3 acyl-CoA transferase/carnitine dehydratase 2501036 2659732 BB2346 Bordetella bronchiseptica RB50 acyl-CoA transferase/carnitine dehydratase NP_888888.1 2499783 D 257310 CDS NP_888889.1 33601329 2661842 2501038..2502183 1 NC_002927.3 hypothetical protein 2502183 2661842 BB2347 Bordetella bronchiseptica RB50 hypothetical protein NP_888889.1 2501038 D 257310 CDS NP_888890.1 33601330 2661846 2502207..2502623 1 NC_002927.3 hypothetical protein 2502623 2661846 BB2348 Bordetella bronchiseptica RB50 hypothetical protein NP_888890.1 2502207 D 257310 CDS NP_888891.1 33601331 2661847 2502639..2503544 1 NC_002927.3 2-pyrone-4,6-dicarboxylic acid hydrolase 2503544 2661847 BB2349 Bordetella bronchiseptica RB50 2-pyrone-4,6-dicarboxylic acid hydrolase NP_888891.1 2502639 D 257310 CDS NP_888892.1 33601332 2659079 2503541..2504893 1 NC_002927.3 hypothetical protein 2504893 2659079 BB2350 Bordetella bronchiseptica RB50 hypothetical protein NP_888892.1 2503541 D 257310 CDS NP_888893.1 33601333 2659080 2504905..2506428 1 NC_002927.3 succinate-semialdehyde dehydrogenase 2506428 gabG 2659080 gabG Bordetella bronchiseptica RB50 succinate-semialdehyde dehydrogenase NP_888893.1 2504905 D 257310 CDS NP_888894.1 33601334 2660107 complement(2506421..2507410) 1 NC_002927.3 LysR family transcriptional regulator 2507410 2660107 BB2352 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_888894.1 2506421 R 257310 CDS NP_888895.1 33601335 2661871 complement(2507420..2508481) 1 NC_002927.3 hypothetical protein 2508481 2661871 BB2353 Bordetella bronchiseptica RB50 hypothetical protein NP_888895.1 2507420 R 257310 CDS NP_888896.1 33601336 2662654 2508675..2509664 1 NC_002927.3 hypothetical protein 2509664 2662654 BB2354 Bordetella bronchiseptica RB50 hypothetical protein NP_888896.1 2508675 D 257310 CDS NP_888897.1 33601337 2662655 2509826..2510896 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2607; hypothetical protein 2510896 2662655 BB2355 Bordetella bronchiseptica RB50 hypothetical protein NP_888897.1 2509826 D 257310 CDS NP_888898.1 33601338 2661836 2512508..2513131 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2598; hypothetical protein 2513131 2661836 BB2357 Bordetella bronchiseptica RB50 hypothetical protein NP_888898.1 2512508 D 257310 CDS NP_888899.1 33601339 2661821 2513162..2513773 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2597; membrane transport protein 2513773 2661821 BB2358 Bordetella bronchiseptica RB50 membrane transport protein NP_888899.1 2513162 D 257310 CDS NP_888900.1 33601340 2661833 2513809..2514279 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2596; hypothetical protein 2514279 2661833 BB2359 Bordetella bronchiseptica RB50 hypothetical protein NP_888900.1 2513809 D 257310 CDS NP_888901.1 33601341 2661834 2514454..2515710 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2595; peptidase 2515710 2661834 BB2360 Bordetella bronchiseptica RB50 peptidase NP_888901.1 2514454 D 257310 CDS NP_888902.1 33601342 2660009 2515747..2517261 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2594; ABC transporter substrate-binding protein 2517261 2660009 BB2361 Bordetella bronchiseptica RB50 ABC transporter substrate-binding protein NP_888902.1 2515747 D 257310 CDS NP_888903.1 33601343 2661229 2517265..2518224 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2593; ABC transporter 2518224 2661229 BB2362 Bordetella bronchiseptica RB50 ABC transporter NP_888903.1 2517265 D 257310 CDS NP_888904.1 33601344 2661837 2518253..2519056 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2592; ABC transporter 2519056 2661837 BB2363 Bordetella bronchiseptica RB50 ABC transporter NP_888904.1 2518253 D 257310 CDS NP_888905.1 33601345 2661982 2519058..2520692 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2591; ABC transporter ATP-binding protein 2520692 2661982 BB2364 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_888905.1 2519058 D 257310 CDS NP_888906.1 33601346 2662088 2520776..2521837 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2590; LacI family transcriptional regulator 2521837 2662088 BB2365 Bordetella bronchiseptica RB50 LacI family transcriptional regulator NP_888906.1 2520776 D 257310 CDS NP_888907.1 33601347 2660915 2522309..2522833 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2589; DNA-binding protein 2522833 2660915 BB2366 Bordetella bronchiseptica RB50 DNA-binding protein NP_888907.1 2522309 D 257310 CDS NP_888908.1 33601348 2661332 complement(2522842..2523333) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2588; regulatory protein 2523333 2661332 BB2367 Bordetella bronchiseptica RB50 regulatory protein NP_888908.1 2522842 R 257310 CDS NP_888909.1 33601349 2659951 2523384..2523878 1 NC_002927.3 hypothetical protein 2523878 2659951 BB2368 Bordetella bronchiseptica RB50 hypothetical protein NP_888909.1 2523384 D 257310 CDS NP_888910.1 33601350 2659814 complement(2523919..2525073) 1 NC_002927.3 hypothetical protein 2525073 2659814 BB2369 Bordetella bronchiseptica RB50 hypothetical protein NP_888910.1 2523919 R 257310 CDS NP_888911.1 33601351 2661214 complement(2525070..2525936) 1 NC_002927.3 (R)-specific enoyl-CoA hydratase 2525936 2661214 BB2370 Bordetella bronchiseptica RB50 (R)-specific enoyl-CoA hydratase NP_888911.1 2525070 R 257310 CDS NP_888912.1 33601352 2661215 complement(2525950..2526918) 1 NC_002927.3 hypothetical protein 2526918 2661215 BB2371 Bordetella bronchiseptica RB50 hypothetical protein NP_888912.1 2525950 R 257310 CDS NP_888913.1 33601353 2659200 complement(2526944..2527687) 1 NC_002927.3 GntR family transcriptional regulator 2527687 2659200 BB2372 Bordetella bronchiseptica RB50 GntR family transcriptional regulator NP_888913.1 2526944 R 257310 CDS NP_888914.1 33601354 2659133 complement(2527869..2528858) 1 NC_002927.3 hypothetical protein 2528858 2659133 BB2373 Bordetella bronchiseptica RB50 hypothetical protein NP_888914.1 2527869 R 257310 CDS NP_888915.1 33601355 2662030 complement(2528894..2529964) 1 NC_002927.3 malate/L-lactate dehydrogenase 2529964 2662030 BB2374 Bordetella bronchiseptica RB50 malate/L-lactate dehydrogenase NP_888915.1 2528894 R 257310 CDS NP_888916.1 33601356 2662031 complement(2529976..2531166) 1 NC_002927.3 FAD dependent oxidoreductase 2531166 2662031 BB2375 Bordetella bronchiseptica RB50 FAD dependent oxidoreductase NP_888916.1 2529976 R 257310 CDS NP_888917.1 33601357 2660074 2531278..2532072 1 NC_002927.3 pyrroline-5-carboxylate reductase 2532072 proC 2660074 proC Bordetella bronchiseptica RB50 pyrroline-5-carboxylate reductase NP_888917.1 2531278 D 257310 CDS NP_888918.1 33601358 2659211 complement(2532088..2532741) 1 NC_002927.3 GntR family transcriptional regulator 2532741 2659211 BB2377 Bordetella bronchiseptica RB50 GntR family transcriptional regulator NP_888918.1 2532088 R 257310 CDS NP_888919.1 33601359 2659368 2532961..2533437 1 NC_002927.3 hypothetical protein 2533437 2659368 BB2378 Bordetella bronchiseptica RB50 hypothetical protein NP_888919.1 2532961 D 257310 CDS NP_888920.1 33601360 2659369 complement(2533447..2534934) 1 NC_002927.3 outer membrane efflux protein 2534934 2659369 BB2379 Bordetella bronchiseptica RB50 outer membrane efflux protein NP_888920.1 2533447 R 257310 CDS NP_888921.1 33601361 2661560 complement(2534949..2536070) 1 NC_002927.3 hypothetical protein 2536070 2661560 BB2380 Bordetella bronchiseptica RB50 hypothetical protein NP_888921.1 2534949 R 257310 CDS NP_888922.1 33601362 2659359 complement(2536077..2537216) 1 NC_002927.3 hypothetical protein 2537216 2659359 BB2381 Bordetella bronchiseptica RB50 hypothetical protein NP_888922.1 2536077 R 257310 CDS NP_888923.1 33601363 2661857 complement(2537213..2538973) 1 NC_002927.3 ABC transporter ATP-binding protein 2538973 2661857 BB2382 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_888923.1 2537213 R 257310 CDS NP_888924.1 33601364 2662063 complement(2538970..2539983) 1 NC_002927.3 hemolysin D 2539983 2662063 BB2383 Bordetella bronchiseptica RB50 hemolysin D NP_888924.1 2538970 R 257310 CDS NP_888925.1 33601365 2662064 2540102..2540749 1 NC_002927.3 TetR family transcriptional regulator 2540749 2662064 BB2384 Bordetella bronchiseptica RB50 TetR family transcriptional regulator NP_888925.1 2540102 D 257310 CDS NP_888926.1 33601366 2661985 2540809..2542569 1 NC_002927.3 hypothetical protein 2542569 2661985 BB2385 Bordetella bronchiseptica RB50 hypothetical protein NP_888926.1 2540809 D 257310 CDS NP_888927.1 33601367 2659733 complement(2542570..2543415) 1 NC_002927.3 aldo/keto reductase-family protein 2543415 2659733 BB2386 Bordetella bronchiseptica RB50 aldo/keto reductase-family protein NP_888927.1 2542570 R 257310 CDS NP_888928.1 33601368 2659143 complement(2543458..2545326) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2158; sigma-54-dependent transcriptional regulator 2545326 2659143 BB2387 Bordetella bronchiseptica RB50 sigma-54-dependent transcriptional regulator NP_888928.1 2543458 R 257310 CDS NP_888929.1 33601369 2660642 2545584..2547113 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2157; aldehyde dehydrogenase 2547113 acoD 2660642 acoD Bordetella bronchiseptica RB50 aldehyde dehydrogenase NP_888929.1 2545584 D 257310 CDS NP_888930.1 33601370 2661251 complement(2547250..2547900) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2156; hypothetical protein 2547900 2661251 BB2389 Bordetella bronchiseptica RB50 hypothetical protein NP_888930.1 2547250 R 257310 CDS NP_888931.1 33601371 2659514 2548032..2548958 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2154; LysR family transcriptional regulator 2548958 2659514 BB2390 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_888931.1 2548032 D 257310 CDS NP_888932.1 33601372 2660558 2548955..2550250 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2153; hypothetical protein 2550250 2660558 BB2391 Bordetella bronchiseptica RB50 hypothetical protein NP_888932.1 2548955 D 257310 CDS NP_888933.1 33601373 2659999 complement(2550272..2551156) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2152; lysR family transcriptional regulator 2551156 2659999 BB2392 Bordetella bronchiseptica RB50 lysR family transcriptional regulator NP_888933.1 2550272 R 257310 CDS NP_888934.1 33601374 2659260 2551255..2552130 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2151; oxidoreductase 2552130 2659260 BB2393 Bordetella bronchiseptica RB50 oxidoreductase NP_888934.1 2551255 D 257310 CDS NP_888935.1 33601375 2662100 complement(2552120..2552476) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2150; hypothetical protein 2552476 2662100 BB2394 Bordetella bronchiseptica RB50 hypothetical protein NP_888935.1 2552120 R 257310 CDS NP_888936.1 33601376 2661319 2552550..2553581 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2149; AraC family transcriptional regulator 2553581 2661319 BB2395 Bordetella bronchiseptica RB50 AraC family transcriptional regulator NP_888936.1 2552550 D 257310 CDS NP_888937.1 33601377 2659641 complement(2553754..2553933) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2148; hypothetical protein 2553933 2659641 BB2396 Bordetella bronchiseptica RB50 hypothetical protein NP_888937.1 2553754 R 257310 CDS NP_888938.1 33601378 2659642 2554031..2554555 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2147; hypothetical protein 2554555 2659642 BB2398 Bordetella bronchiseptica RB50 hypothetical protein NP_888938.1 2554031 D 257310 CDS NP_888939.1 33601379 2661158 complement(2554566..2555402) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2146; hypothetical protein 2555402 2661158 BB2399 Bordetella bronchiseptica RB50 hypothetical protein NP_888939.1 2554566 R 257310 CDS NP_888940.1 33601380 2660546 2555515..2555886 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2145; ArsR family transcriptional regulator 2555886 2660546 BB2400 Bordetella bronchiseptica RB50 ArsR family transcriptional regulator NP_888940.1 2555515 D 257310 CDS NP_888941.1 33601381 2659289 2555883..2556434 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2144; hypothetical protein 2556434 2659289 BB2401 Bordetella bronchiseptica RB50 hypothetical protein NP_888941.1 2555883 D 257310 CDS NP_888942.1 33601382 2659290 complement(2556450..2558141) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2143; sulfate transporter 2558141 2659290 BB2402 Bordetella bronchiseptica RB50 sulfate transporter NP_888942.1 2556450 R 257310 CDS NP_888943.1 33601383 2658961 complement(2558190..2558870) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2142; GntR family transcriptional regulator 2558870 2658961 BB2403 Bordetella bronchiseptica RB50 GntR family transcriptional regulator NP_888943.1 2558190 R 257310 CDS NP_888944.1 33601384 2663825 complement(2559119..2559577) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2141; hypothetical protein 2559577 2663825 BB2404 Bordetella bronchiseptica RB50 hypothetical protein NP_888944.1 2559119 R 257310 CDS NP_888945.1 33601385 2663826 2559747..2560676 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2140; hypothetical protein 2560676 2663826 BB2405 Bordetella bronchiseptica RB50 hypothetical protein NP_888945.1 2559747 D 257310 CDS NP_888946.1 33601386 2661507 complement(2560689..2561336) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2139; lipoprotein 2561336 2661507 BB2406 Bordetella bronchiseptica RB50 lipoprotein NP_888946.1 2560689 R 257310 CDS NP_888947.1 33601387 2662619 complement(2561410..2563227) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2138; ABC transporter ATP-binding protein 2563227 2662619 BB2407 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_888947.1 2561410 R 257310 CDS NP_888948.1 33601388 2661207 complement(2563311..2563862) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2136; acetyltransferase 2563862 2661207 BB2408 Bordetella bronchiseptica RB50 acetyltransferase NP_888948.1 2563311 R 257310 CDS NP_888949.1 33601389 2659282 2563917..2564111 1 NC_002927.3 hypothetical protein 2564111 2659282 BB2409 Bordetella bronchiseptica RB50 hypothetical protein NP_888949.1 2563917 D 257310 CDS NP_888950.1 33601390 2659283 complement(2564130..2564477) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2134; hypothetical protein 2564477 2659283 BB2410 Bordetella bronchiseptica RB50 hypothetical protein NP_888950.1 2564130 R 257310 CDS NP_888951.1 33601391 2659121 complement(2564506..2565945) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2133; transmembrane efflux protein 2565945 2659121 BB2411 Bordetella bronchiseptica RB50 transmembrane efflux protein NP_888951.1 2564506 R 257310 CDS NP_888952.1 33601392 2661249 complement(2565964..2566383) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2132; hypothetical protein 2566383 2661249 BB2412 Bordetella bronchiseptica RB50 hypothetical protein NP_888952.1 2565964 R 257310 CDS NP_888953.1 33601393 2661250 2566534..2567142 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2131; hypothetical protein 2567142 2661250 BB2413 Bordetella bronchiseptica RB50 hypothetical protein NP_888953.1 2566534 D 257310 CDS NP_888954.1 33601394 2659074 2567155..2567973 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2130; hypothetical protein 2567973 2659074 BB2414 Bordetella bronchiseptica RB50 hypothetical protein NP_888954.1 2567155 D 257310 CDS NP_888955.1 33601395 2659075 complement(2567925..2568899) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2129; AraC family transcriptional regulator 2568899 2659075 BB2415 Bordetella bronchiseptica RB50 AraC family transcriptional regulator NP_888955.1 2567925 R 257310 CDS NP_888956.1 33601396 2659077 complement(2568928..2569989) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2128; hypothetical protein 2569989 2659077 BB2416 Bordetella bronchiseptica RB50 hypothetical protein NP_888956.1 2568928 R 257310 CDS NP_888957.1 33601397 2659108 complement(2569986..2572199) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2127; oxidoreductase subunit 2572199 2659108 BB2417 Bordetella bronchiseptica RB50 oxidoreductase subunit NP_888957.1 2569986 R 257310 CDS NP_888958.1 33601398 2660535 complement(2572213..2572671) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2126; oxidoreductase subunit 2572671 2660535 BB2418 Bordetella bronchiseptica RB50 oxidoreductase subunit NP_888958.1 2572213 R 257310 CDS NP_888959.1 33601399 2661473 complement(2572829..2573173) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2125A; hypothetical protein 2573173 2661473 BB2419 Bordetella bronchiseptica RB50 hypothetical protein NP_888959.1 2572829 R 257310 CDS NP_888960.1 33601400 2661474 2573366..2574235 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2125; lysR family transcriptional regulator 2574235 2661474 BB2420 Bordetella bronchiseptica RB50 lysR family transcriptional regulator NP_888960.1 2573366 D 257310 CDS NP_888961.1 33601401 2661488 2574322..2575335 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2124; hypothetical protein 2575335 2661488 BB2421 Bordetella bronchiseptica RB50 hypothetical protein NP_888961.1 2574322 D 257310 CDS NP_888962.1 33601402 2661828 complement(2575343..2576461) 1 NC_002927.3 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, tyrosine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 2576461 aroG 2661828 aroG Bordetella bronchiseptica RB50 phospho-2-dehydro-3-deoxyheptonate aldolase NP_888962.1 2575343 R 257310 CDS NP_888963.1 33601403 2661829 complement(2576583..2577227) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2122; hypothetical protein 2577227 2661829 BB2423 Bordetella bronchiseptica RB50 hypothetical protein NP_888963.1 2576583 R 257310 CDS NP_888964.1 33601404 2662011 complement(2577429..2578781) 1 NC_002927.3 catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense; glutathione reductase 2578781 gor 2662011 gor Bordetella bronchiseptica RB50 glutathione reductase NP_888964.1 2577429 R 257310 CDS NP_888965.1 33601405 2662594 2578956..2579252 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2119; hypothetical protein 2579252 2662594 BB2425 Bordetella bronchiseptica RB50 hypothetical protein NP_888965.1 2578956 D 257310 CDS NP_888966.1 33601406 2662623 2579277..2579654 1 NC_002927.3 hypothetical protein 2579654 2662623 BB2426 Bordetella bronchiseptica RB50 hypothetical protein NP_888966.1 2579277 D 257310 CDS NP_888967.1 33601407 2660626 2579695..2580390 1 NC_002927.3 glutathione S-transferase 2580390 2660626 BB2427 Bordetella bronchiseptica RB50 glutathione S-transferase NP_888967.1 2579695 D 257310 CDS NP_888968.1 33601408 2660316 complement(2580401..2581882) 1 NC_002927.3 GntR family transcriptional regulator 2581882 2660316 BB2428 Bordetella bronchiseptica RB50 GntR family transcriptional regulator NP_888968.1 2580401 R 257310 CDS NP_888969.1 33601409 2660308 2581959..2582669 1 NC_002927.3 GNAT family acetyltransferase 2582669 2660308 BB2429 Bordetella bronchiseptica RB50 GNAT family acetyltransferase NP_888969.1 2581959 D 257310 CDS NP_888970.1 33601410 2660671 complement(2582772..2583698) 1 NC_002927.3 integral membrane protein 2583698 2660671 BB2430 Bordetella bronchiseptica RB50 integral membrane protein NP_888970.1 2582772 R 257310 CDS NP_888971.1 33601411 2659064 complement(2583701..2584036) 1 NC_002927.3 thioredoxin 2584036 2659064 BB2431 Bordetella bronchiseptica RB50 thioredoxin NP_888971.1 2583701 R 257310 CDS NP_888972.1 33601412 2661776 complement(2584094..2585356) 1 NC_002927.3 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase 2585356 amaB 2661776 amaB Bordetella bronchiseptica RB50 allantoate amidohydrolase NP_888972.1 2584094 R 257310 CDS NP_888973.1 33601413 2659284 complement(2585386..2586768) 1 NC_002927.3 multidrug resistance protein 2586768 norM 2659284 norM Bordetella bronchiseptica RB50 multidrug resistance protein NP_888973.1 2585386 R 257310 CDS NP_888974.1 33601414 2659771 2586956..2588812 1 NC_002927.3 catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP; phosphoenolpyruvate carboxykinase 2588812 pckG 2659771 pckG Bordetella bronchiseptica RB50 phosphoenolpyruvate carboxykinase NP_888974.1 2586956 D 257310 CDS NP_888975.1 33601415 2661533 2588873..2589496 1 NC_002927.3 hypothetical protein 2589496 2661533 BB2435 Bordetella bronchiseptica RB50 hypothetical protein NP_888975.1 2588873 D 257310 CDS NP_888976.1 33601416 2661534 2589550..2590017 1 NC_002927.3 hypothetical protein 2590017 2661534 BB2436 Bordetella bronchiseptica RB50 hypothetical protein NP_888976.1 2589550 D 257310 CDS NP_888977.1 33601417 2661535 complement(2590150..2591013) 1 NC_002927.3 hypothetical protein 2591013 2661535 BB2437 Bordetella bronchiseptica RB50 hypothetical protein NP_888977.1 2590150 R 257310 CDS NP_888978.1 33601418 2661015 complement(2591010..2591972) 1 NC_002927.3 3-hydroxybutyryl-CoA dehydrogenase 2591972 2661015 BB2438 Bordetella bronchiseptica RB50 3-hydroxybutyryl-CoA dehydrogenase NP_888978.1 2591010 R 257310 CDS NP_888979.1 33601419 2662108 2592087..2593088 1 NC_002927.3 LysR family transcriptional regulator 2593088 2662108 BB2439 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_888979.1 2592087 D 257310 CDS NP_888980.1 33601420 2662216 complement(2593012..2594304) 1 NC_002927.3 hypothetical protein 2594304 2662216 BB2440 Bordetella bronchiseptica RB50 hypothetical protein NP_888980.1 2593012 R 257310 CDS NP_888981.1 33601421 2660957 complement(2594297..2594788) 1 NC_002927.3 hypothetical protein 2594788 2660957 BB2441 Bordetella bronchiseptica RB50 hypothetical protein NP_888981.1 2594297 R 257310 CDS NP_888982.1 33601422 2661202 complement(2594798..2595829) 1 NC_002927.3 C4-dicarboxylate ABC transporter substrate-binding protein 2595829 2661202 BB2442 Bordetella bronchiseptica RB50 C4-dicarboxylate ABC transporter substrate-binding protein NP_888982.1 2594798 R 257310 CDS NP_888983.1 33601423 2658992 complement(2595885..2596844) 1 NC_002927.3 hypothetical protein 2596844 2658992 BB2443 Bordetella bronchiseptica RB50 hypothetical protein NP_888983.1 2595885 R 257310 CDS NP_888984.1 33601424 2658993 complement(2596832..2597638) 1 NC_002927.3 hypothetical protein 2597638 2658993 BB2444 Bordetella bronchiseptica RB50 hypothetical protein NP_888984.1 2596832 R 257310 CDS NP_888985.1 33601425 2658994 complement(2597635..2598531) 1 NC_002927.3 dehydrogenase 2598531 2658994 BB2445 Bordetella bronchiseptica RB50 dehydrogenase NP_888985.1 2597635 R 257310 CDS NP_888986.1 33601426 2662097 complement(2598528..2600240) 1 NC_002927.3 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 2600240 ilvD 2662097 ilvD Bordetella bronchiseptica RB50 dihydroxy-acid dehydratase NP_888986.1 2598528 R 257310 CDS NP_888987.1 33601427 2659484 complement(2600281..2600961) 1 NC_002927.3 GntR family transcriptional regulator 2600961 2659484 BB2447 Bordetella bronchiseptica RB50 GntR family transcriptional regulator NP_888987.1 2600281 R 257310 CDS NP_888988.1 33601428 2659233 complement(2601157..2602647) 1 NC_002927.3 Similar to Rhizobium meliloti hypothetical signal peptide protein smc01185 r01608 or smc01185 SWALL:Q92PW5 (EMBL:AL591787) (495 aa) fasta scores: E(): 2.1e-147, 71.51% id in 488 aa; hypothetical protein 2602647 2659233 BB2448 Bordetella bronchiseptica RB50 hypothetical protein NP_888988.1 2601157 R 257310 CDS NP_888989.1 33601429 2661966 complement(2602731..2604182) 1 NC_002927.3 Similar to Rhizobium meliloti hypothetical transmembrane protein smc01184 r01609 or smc01184 SWALL:Q92PW4 (EMBL:AL591787) (512 aa) fasta scores: E(): 2.8e-135, 68.44% id in 469 aa; hypothetical protein 2604182 2661966 BB2449 Bordetella bronchiseptica RB50 hypothetical protein NP_888989.1 2602731 R 257310 CDS NP_888990.1 33601430 2661967 2604437..2605345 1 NC_002927.3 Weakly similar to Pseudomonas putida EbdR protein ebdR SWALL:Q9K4R5 (EMBL:AJ293588) (332 aa) fasta scores: E(): 0.036, 25.81% id in 275 aa; hypothetical protein 2605345 2661967 BB2450 Bordetella bronchiseptica RB50 hypothetical protein NP_888990.1 2604437 D 257310 CDS NP_888991.1 33601431 2661968 complement(2605384..2606070) 1 NC_002927.3 GntR family transcriptional regulator 2606070 2661968 BB2451 Bordetella bronchiseptica RB50 GntR family transcriptional regulator NP_888991.1 2605384 R 257310 CDS NP_888992.1 33601432 2660466 complement(2606077..2607819) 1 NC_002927.3 catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; dihydroxy-acid dehydratase 2607819 ilvD 2660466 ilvD Bordetella bronchiseptica RB50 dihydroxy-acid dehydratase NP_888992.1 2606077 R 257310 CDS NP_888993.1 33601433 2660543 2608052..2609056 1 NC_002927.3 hypothetical protein 2609056 2660543 BB2453 Bordetella bronchiseptica RB50 hypothetical protein NP_888993.1 2608052 D 257310 CDS NP_888994.1 33601434 2661274 complement(2609070..2610707) 1 NC_002927.3 alcohol dehydrogenase 2610707 alkJ 2661274 alkJ Bordetella bronchiseptica RB50 alcohol dehydrogenase NP_888994.1 2609070 R 257310 CDS NP_888995.1 33601435 2661962 complement(2610724..2611731) 1 NC_002927.3 hypothetical protein 2611731 2661962 BB2455 Bordetella bronchiseptica RB50 hypothetical protein NP_888995.1 2610724 R 257310 CDS NP_888996.1 33601436 2661963 complement(2611754..2612575) 1 NC_002927.3 taurine ABC transporter ATP-binding protein 2612575 2661963 BB2456 Bordetella bronchiseptica RB50 taurine ABC transporter ATP-binding protein NP_888996.1 2611754 R 257310 CDS NP_888997.1 33601437 2662141 complement(2612595..2613362) 1 NC_002927.3 taurine ABC transporter permease 2613362 2662141 BB2457 Bordetella bronchiseptica RB50 taurine ABC transporter permease NP_888997.1 2612595 R 257310 CDS NP_888998.1 33601438 2660715 2613462..2614187 1 NC_002927.3 GntR family transcriptional regulator 2614187 2660715 BB2458 Bordetella bronchiseptica RB50 GntR family transcriptional regulator NP_888998.1 2613462 D 257310 CDS NP_888999.1 33601439 2659186 2614195..2615343 1 NC_002927.3 mandelate racemase/muconate lactonizing enzyme 2615343 2659186 BB2459 Bordetella bronchiseptica RB50 mandelate racemase/muconate lactonizing enzyme NP_888999.1 2614195 D 257310 CDS NP_889000.1 33601440 2660115 complement(2615359..2616279) 1 NC_002927.3 LysR family transcriptional regulator 2616279 2660115 BB2460 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_889000.1 2615359 R 257310 CDS NP_889001.1 33601441 2659173 2616394..2617134 1 NC_002927.3 member of a large family of NAD or NADP-dependent oxidoreductases; paralogs occur in many bacteria; short chain dehydrogenase 2617134 2659173 BB2461 Bordetella bronchiseptica RB50 short chain dehydrogenase NP_889001.1 2616394 D 257310 CDS NP_889002.1 33601442 2659671 complement(2617266..2617958) 1 NC_002927.3 lipoprotein 2617958 2659671 BB2462 Bordetella bronchiseptica RB50 lipoprotein NP_889002.1 2617266 R 257310 CDS NP_889003.1 33601443 2661553 2618319..2618741 1 NC_002927.3 hypothetical protein 2618741 2661553 BB2463 Bordetella bronchiseptica RB50 hypothetical protein NP_889003.1 2618319 D 257310 CDS NP_889004.1 33601444 2661554 2618863..2620056 1 NC_002927.3 hypothetical protein 2620056 2661554 BB2464 Bordetella bronchiseptica RB50 hypothetical protein NP_889004.1 2618863 D 257310 CDS NP_889005.1 33601445 2662103 complement(2620063..2621034) 1 NC_002927.3 LysR family transcriptional regulator 2621034 2662103 BB2465 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_889005.1 2620063 R 257310 CDS NP_889006.1 33601446 2661556 2621101..2622687 1 NC_002927.3 sulfatase 2622687 2661556 BB2466 Bordetella bronchiseptica RB50 sulfatase NP_889006.1 2621101 D 257310 CDS NP_889007.1 33601447 2661444 2622729..2623706 1 NC_002927.3 hypothetical protein 2623706 2661444 BB2467 Bordetella bronchiseptica RB50 hypothetical protein NP_889007.1 2622729 D 257310 CDS NP_889008.1 33601448 2659251 complement(2623727..2624239) 1 NC_002927.3 hypothetical protein 2624239 2659251 BB2468 Bordetella bronchiseptica RB50 hypothetical protein NP_889008.1 2623727 R 257310 CDS NP_889009.1 33601449 2661824 2624738..2626243 1 NC_002927.3 hypothetical protein 2626243 2661824 BB2469 Bordetella bronchiseptica RB50 hypothetical protein NP_889009.1 2624738 D 257310 CDS NP_889010.1 33601450 2660553 complement(2626341..2626805) 1 NC_002927.3 hypothetical protein 2626805 2660553 BB2470 Bordetella bronchiseptica RB50 hypothetical protein NP_889010.1 2626341 R 257310 CDS NP_889011.1 33601451 2660554 complement(2626915..2627340) 1 NC_002927.3 plasmid stability protein 2627340 stbB 2660554 stbB Bordetella bronchiseptica RB50 plasmid stability protein NP_889011.1 2626915 R 257310 CDS NP_889012.1 33601452 2659602 complement(2627337..2627576) 1 NC_002927.3 plasmid stability protein 2627576 stbC 2659602 stbC Bordetella bronchiseptica RB50 plasmid stability protein NP_889012.1 2627337 R 257310 CDS NP_889013.1 33601453 2659603 complement(2627650..2628492) 1 NC_002927.3 AraC family transcriptional regulator 2628492 2659603 BB2473 Bordetella bronchiseptica RB50 AraC family transcriptional regulator NP_889013.1 2627650 R 257310 CDS NP_889014.1 33601454 2660594 2628630..2629175 1 NC_002927.3 hypothetical protein 2629175 mip 2660594 mip Bordetella bronchiseptica RB50 hypothetical protein NP_889014.1 2628630 D 257310 CDS NP_889015.1 33601455 2659140 2629234..2629746 1 NC_002927.3 hypothetical protein 2629746 2659140 BB2475 Bordetella bronchiseptica RB50 hypothetical protein NP_889015.1 2629234 D 257310 CDS NP_889016.1 33601456 2659141 2629773..2630060 1 NC_002927.3 hypothetical protein 2630060 2659141 BB2476 Bordetella bronchiseptica RB50 hypothetical protein NP_889016.1 2629773 D 257310 CDS NP_889017.1 33601457 2659516 2630057..2630617 1 NC_002927.3 hypothetical protein 2630617 2659516 BB2477 Bordetella bronchiseptica RB50 hypothetical protein NP_889017.1 2630057 D 257310 CDS NP_889018.1 33601458 2659517 2630695..2631741 1 NC_002927.3 hypothetical protein 2631741 2659517 BB2478 Bordetella bronchiseptica RB50 hypothetical protein NP_889018.1 2630695 D 257310 CDS NP_889019.1 33601459 2661469 2631738..2632541 1 NC_002927.3 bacteriocin 2632541 linM18 2661469 linM18 Bordetella bronchiseptica RB50 bacteriocin NP_889019.1 2631738 D 257310 CDS NP_889020.1 33601460 2661470 complement(2632596..2633894) 1 NC_002927.3 hypothetical protein 2633894 2661470 BB2480 Bordetella bronchiseptica RB50 hypothetical protein NP_889020.1 2632596 R 257310 CDS NP_889021.1 33601461 2660637 complement(2633898..2634419) 1 NC_002927.3 hypothetical protein 2634419 2660637 BB2481 Bordetella bronchiseptica RB50 hypothetical protein NP_889021.1 2633898 R 257310 CDS NP_889022.1 33601462 2660638 complement(2634461..2635468) 1 NC_002927.3 C4-dicarboxylate ABC transporter substrate-binding protein 2635468 2660638 BB2482 Bordetella bronchiseptica RB50 C4-dicarboxylate ABC transporter substrate-binding protein NP_889022.1 2634461 R 257310 CDS NP_889023.1 33601463 2660661 complement(2635493..2636119) 1 NC_002927.3 isochorismatase 2636119 2660661 BB2483 Bordetella bronchiseptica RB50 isochorismatase NP_889023.1 2635493 R 257310 CDS NP_889024.1 33601464 2660387 complement(2636694..2637515) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2117; transcriptional regulator 2637515 2660387 BB2484 Bordetella bronchiseptica RB50 transcriptional regulator NP_889024.1 2636694 R 257310 CDS NP_889025.1 33601465 2659953 2637554..2638525 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2116; hypothetical protein 2638525 2659953 BB2485 Bordetella bronchiseptica RB50 hypothetical protein NP_889025.1 2637554 D 257310 CDS NP_889026.1 33601466 2661314 2638529..2639383 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2115; hypothetical protein 2639383 2661314 BB2486 Bordetella bronchiseptica RB50 hypothetical protein NP_889026.1 2638529 D 257310 CDS NP_889027.1 33601467 2661315 2639402..2640220 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2114; hydrolase 2640220 2661315 BB2487 Bordetella bronchiseptica RB50 hydrolase NP_889027.1 2639402 D 257310 CDS NP_889028.1 33601468 2659494 2640240..2641700 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2113; amidase 2641700 2659494 BB2488 Bordetella bronchiseptica RB50 amidase NP_889028.1 2640240 D 257310 CDS NP_889029.1 33601469 2660412 2641703..2642491 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2112; oxidoreductase 2642491 2660412 BB2489 Bordetella bronchiseptica RB50 oxidoreductase NP_889029.1 2641703 D 257310 CDS NP_889030.1 33601470 2660582 2642893..2644887 1 NC_002927.3 Similar to Lactococcus lactis abortive infection phage resistance protein abiu SWALL:Q9F9J7 (EMBL:AF188839) (589 aa) fasta scores: E(): 2.3e-36, 30.17% id in 570 aa; abortive infection phage resistance protein 2644887 2660582 BB2490 Bordetella bronchiseptica RB50 abortive infection phage resistance protein NP_889030.1 2642893 D 257310 CDS NP_889031.1 33601471 2659895 complement(2646061..2646321) 1 NC_002927.3 Similar to Caulobacter crescentus insertion sequence IS511 orfa and orfb genes, complete cds cc2741 and cc0514 and cc2291 and cc2689 SWALL:Q45992 (EMBL:U39501) (88 aa) fasta scores: E(): 8.2e-19, 67.81% id in 87 aa, and to Agrobacterium tumefaciens IS3 family transposase orfa or atu4605 or agr_l_545 SWALL:Q8U750 (EMBL:AE009388) (88 aa) fasta scores: E(): 2.9e-21, 75.29% id in 85 aa; transposase 2646321 2659895 BB2492 Bordetella bronchiseptica RB50 transposase NP_889031.1 2646061 R 257310 CDS NP_889032.1 33601472 2658956 complement(2646550..2647761) 1 NC_002927.3 Similar to Streptomyces coelicolor DNA-binding protein sco3537 or sce2.18C SWALL:Q9X8B2 (EMBL:AL049645) (390 aa) fasta scores: E(): 1.3e-17, 29.85% id in 345 aa, and to Neisseria meningitidis transcriptional regulator, hth_3 family nmb2012 SWALL:Q9JXJ6 (EMBL:AE002551) (363 aa) fasta scores: E(): 6.9e-18, 27.83% id in 370 aa; phage-related DNA-binding protein 2647761 2658956 BB2493 Bordetella bronchiseptica RB50 phage-related DNA-binding protein NP_889032.1 2646550 R 257310 CDS NP_889033.1 33601473 2663909 complement(2647758..2648414) 1 NC_002927.3 no significant database matches; phage-like hypothetical protein 2648414 2663909 BB2494 Bordetella bronchiseptica RB50 phage-like hypothetical protein NP_889033.1 2647758 R 257310 CDS NP_889034.1 33601474 2660103 complement(2649010..2650515) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2111; hypothetical protein 2650515 2660103 BB2495 Bordetella bronchiseptica RB50 hypothetical protein NP_889034.1 2649010 R 257310 CDS NP_889035.1 33601475 2660104 complement(2650557..2651339) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2110; exodeoxyribonuclease III 2651339 2660104 BB2496 Bordetella bronchiseptica RB50 exodeoxyribonuclease III NP_889035.1 2650557 R 257310 CDS NP_889036.1 33601476 2661146 complement(2651409..2651855) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2109; hypothetical protein 2651855 2661146 BB2497 Bordetella bronchiseptica RB50 hypothetical protein NP_889036.1 2651409 R 257310 CDS NP_889037.1 33601477 2659063 complement(2651852..2653078) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2108; hypothetical protein 2653078 2659063 BB2498 Bordetella bronchiseptica RB50 hypothetical protein NP_889037.1 2651852 R 257310 CDS NP_889038.1 33601478 2659130 complement(2653071..2653475) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2107; hypothetical protein 2653475 2659130 BB2499 Bordetella bronchiseptica RB50 hypothetical protein NP_889038.1 2653071 R 257310 CDS NP_889039.1 33601479 2659131 2653635..2653937 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2106; hypothetical protein 2653937 2659131 BB2500 Bordetella bronchiseptica RB50 hypothetical protein NP_889039.1 2653635 D 257310 CDS NP_889040.1 33601480 2662121 complement(2653934..2654704) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1362; amino-acid ABC transporter ATP-binding protein 2654704 2662121 BB2501 Bordetella bronchiseptica RB50 amino-acid ABC transporter ATP-binding protein NP_889040.1 2653934 R 257310 CDS NP_889041.1 33601481 2661986 complement(2654701..2655381) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1363; amino-acid ABC transporter permease 2655381 2661986 BB2502 Bordetella bronchiseptica RB50 amino-acid ABC transporter permease NP_889041.1 2654701 R 257310 CDS NP_889042.1 33601482 2661977 complement(2655448..2656236) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1364; amino acid ABC transporter substrate-binding protein 2656236 2661977 BB2503 Bordetella bronchiseptica RB50 amino acid ABC transporter substrate-binding protein NP_889042.1 2655448 R 257310 CDS NP_889043.1 33601483 2662022 complement(2656511..2658847) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2722; membrane transport ATPase 2658847 2662022 BB2504 Bordetella bronchiseptica RB50 membrane transport ATPase NP_889043.1 2656511 R 257310 CDS NP_889044.1 33601484 2662584 2658930..2659364 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2723; MerR family transcriptional regulator 2659364 2662584 BB2505 Bordetella bronchiseptica RB50 MerR family transcriptional regulator NP_889044.1 2658930 D 257310 CDS NP_889045.1 33601485 2662630 2659467..2660051 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2703; hypothetical protein 2660051 2662630 BB2506 Bordetella bronchiseptica RB50 hypothetical protein NP_889045.1 2659467 D 257310 CDS NP_889046.1 33601486 2663883 complement(2660121..2661542) 1 NC_002927.3 catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 2661542 argH 2663883 argH Bordetella bronchiseptica RB50 argininosuccinate lyase NP_889046.1 2660121 R 257310 CDS NP_889047.1 33601487 2661210 2661650..2662996 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2701; membrane transport protein 2662996 2661210 BB2508 Bordetella bronchiseptica RB50 membrane transport protein NP_889047.1 2661650 D 257310 CDS NP_889048.1 33601488 2659404 2663035..2664669 1 NC_002927.3 NH(3)-dependent; catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 2664669 nadE 2659404 nadE Bordetella bronchiseptica RB50 NAD synthetase NP_889048.1 2663035 D 257310 CDS NP_889049.1 33601489 2659554 2664713..2665051 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2699; nitrogen regulatory protein 2665051 glnB 2659554 glnB Bordetella bronchiseptica RB50 nitrogen regulatory protein NP_889049.1 2664713 D 257310 CDS NP_889050.1 33601490 2660482 complement(2665076..2665450) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2698; endonuclease 2665450 2660482 BB2511 Bordetella bronchiseptica RB50 endonuclease NP_889050.1 2665076 R 257310 CDS NP_889051.1 33601491 2660102 2665536..2665916 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2697; heat shock protein 2665916 2660102 BB2512 Bordetella bronchiseptica RB50 heat shock protein NP_889051.1 2665536 D 257310 CDS NP_889052.1 33601492 2659019 2666033..2667970 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2696; phosphatase 2667970 2659019 BB2513 Bordetella bronchiseptica RB50 phosphatase NP_889052.1 2666033 D 257310 CDS NP_889053.1 33601493 2659020 complement(2668120..2668665) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2695; hypothetical protein 2668665 2659020 BB2514 Bordetella bronchiseptica RB50 hypothetical protein NP_889053.1 2668120 R 257310 CDS NP_889054.1 33601494 2662077 complement(2668738..2669619) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2694; LysR family transcriptional regulator 2669619 2662077 BB2515 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_889054.1 2668738 R 257310 CDS NP_889055.1 33601495 2660679 2669727..2671355 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2693; gamma-glutamyltranspeptidase 2671355 2660679 BB2516 Bordetella bronchiseptica RB50 gamma-glutamyltranspeptidase NP_889055.1 2669727 D 257310 CDS NP_889056.1 33601496 2661209 2671397..2672914 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2692; ABC transporter substrate-binding protein 2672914 2661209 BB2517 Bordetella bronchiseptica RB50 ABC transporter substrate-binding protein NP_889056.1 2671397 D 257310 CDS NP_889057.1 33601497 2660012 2673009..2673953 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2691; peptide ABC transporter permease 2673953 2660012 BB2518 Bordetella bronchiseptica RB50 peptide ABC transporter permease NP_889057.1 2673009 D 257310 CDS NP_889058.1 33601498 2660689 2673950..2674825 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2690; ABC transporter inner membrane protein 2674825 2660689 BB2519 Bordetella bronchiseptica RB50 ABC transporter inner membrane protein NP_889058.1 2673950 D 257310 CDS NP_889059.1 33601499 2660632 2674828..2676687 1 NC_002927.3 ABC transporter ATP-binding protein 2676687 2660632 BB2520 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_889059.1 2674828 D 257310 CDS NP_889060.1 33601500 2659159 complement(2676690..2677334) 1 NC_002927.3 LysE family efflux protein 2677334 2659159 BB2521 Bordetella bronchiseptica RB50 LysE family efflux protein NP_889060.1 2676690 R 257310 CDS NP_889061.1 33601501 2662018 2677426..2677962 1 NC_002927.3 hypothetical protein 2677962 2662018 BB2522 Bordetella bronchiseptica RB50 hypothetical protein NP_889061.1 2677426 D 257310 CDS NP_889062.1 33601502 2662019 complement(2678096..2679286) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0980; hypothetical protein 2679286 2662019 BB2523 Bordetella bronchiseptica RB50 hypothetical protein NP_889062.1 2678096 R 257310 CDS NP_889063.1 33601503 2659213 complement(2679353..2679925) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0981; hypothetical protein 2679925 2659213 BB2524 Bordetella bronchiseptica RB50 hypothetical protein NP_889063.1 2679353 R 257310 CDS NP_889064.1 33601504 2659107 2679985..2680716 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0982; RNA pseudouridylate synthase 2680716 2659107 BB2525 Bordetella bronchiseptica RB50 RNA pseudouridylate synthase NP_889064.1 2679985 D 257310 CDS NP_889065.1 33601505 2659240 complement(2680768..2681685) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0983; LysR family transcriptional regulator 2681685 2659240 BB2526 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_889065.1 2680768 R 257310 CDS NP_889066.1 33601506 2662081 2681936..2683126 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0984; acriflavine resistance protein a precursor 2683126 acrA 2662081 acrA Bordetella bronchiseptica RB50 acriflavine resistance protein a precursor NP_889066.1 2681936 D 257310 CDS NP_889067.1 33601507 2662148 2683139..2686318 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0985; acriflavine resistance protein B 2686318 acrB 2662148 acrB Bordetella bronchiseptica RB50 acriflavine resistance protein B NP_889067.1 2683139 D 257310 CDS NP_889068.1 33601508 2659744 2686315..2687781 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0986; outer membrane lipoprotein 2687781 cusC 2659744 cusC Bordetella bronchiseptica RB50 outer membrane lipoprotein NP_889068.1 2686315 D 257310 CDS NP_889069.1 33601509 2659755 complement(2687851..2688102) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0987; hypothetical protein 2688102 2659755 BB2530 Bordetella bronchiseptica RB50 hypothetical protein NP_889069.1 2687851 R 257310 CDS NP_889070.1 33601510 2660113 complement(2688248..2688898) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0988; hypothetical protein 2688898 2660113 BB2531 Bordetella bronchiseptica RB50 hypothetical protein NP_889070.1 2688248 R 257310 CDS NP_889071.1 33601511 2659907 complement(2689054..2691168) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0989; oligopeptidase A 2691168 prlC 2659907 prlC Bordetella bronchiseptica RB50 oligopeptidase A NP_889071.1 2689054 R 257310 CDS NP_889072.1 33601512 2659442 complement(2691244..2692095) 1 NC_002927.3 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 2692095 folD 2659442 folD Bordetella bronchiseptica RB50 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase NP_889072.1 2691244 R 257310 CDS NP_889073.1 33601513 2661512 complement(2692092..2692718) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0991; two-component response regulator 2692718 2661512 BB2534 Bordetella bronchiseptica RB50 two-component response regulator NP_889073.1 2692092 R 257310 CDS NP_889074.1 33601514 2661519 complement(2692715..2694469) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0992; tw-component sensor kinase 2694469 2661519 BB2535 Bordetella bronchiseptica RB50 tw-component sensor kinase NP_889074.1 2692715 R 257310 CDS NP_889075.1 33601515 2659917 2694762..2697467 1 NC_002927.3 E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1 2697467 aceE 2659917 aceE Bordetella bronchiseptica RB50 pyruvate dehydrogenase subunit E1 NP_889075.1 2694762 D 257310 CDS NP_889076.1 33601516 2659918 2697480..2699135 1 NC_002927.3 Catalyzes the transfer of acetyl from acetyldihydrolipoamide to coenzyme A to form acetyl CoA; dihydrolipoamide acetyltransferase 2699135 aceF 2659918 aceF Bordetella bronchiseptica RB50 dihydrolipoamide acetyltransferase NP_889076.1 2697480 D 257310 CDS NP_889077.1 33601517 2660663 2699148..2700923 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0995; dihydrolipoamide dehydrogenase 2700923 lpdA 2660663 lpdA Bordetella bronchiseptica RB50 dihydrolipoamide dehydrogenase NP_889077.1 2699148 D 257310 CDS NP_889078.1 33601518 2660033 complement(2701146..2702321) 1 NC_002927.3 structural flagella protein; flagellin 2702321 flaA 2660033 flaA Bordetella bronchiseptica RB50 flagellin NP_889078.1 2701146 R 257310 CDS NP_889079.1 33601519 2662241 complement(2702708..2703445) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1021; RNA polymerase sigma factor for flagellar operon 2703445 fliA 2662241 fliA Bordetella bronchiseptica RB50 RNA polymerase sigma factor for flagellar operon NP_889079.1 2702708 R 257310 CDS NP_889080.1 33601520 2660623 2703881..2704204 1 NC_002927.3 with FlhC is involved in the activation of class 2 flagellar genes and is involved in the regulation of a number of other genetic systems; transcriptional activator FlhD 2704204 flhD 2660623 flhD Bordetella bronchiseptica RB50 transcriptional activator FlhD NP_889080.1 2703881 D 257310 CDS NP_889081.1 33601521 2660624 2704239..2704799 1 NC_002927.3 With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems; transcriptional activator FlhC 2704799 flhC 2660624 flhC Bordetella bronchiseptica RB50 transcriptional activator FlhC NP_889081.1 2704239 D 257310 CDS NP_889082.1 33601522 2660625 2704920..2705795 1 NC_002927.3 With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotA 2705795 motA 2660625 motA Bordetella bronchiseptica RB50 flagellar motor protein MotA NP_889082.1 2704920 D 257310 CDS NP_889083.1 33601523 2660620 2705808..2706755 1 NC_002927.3 with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotB 2706755 motB 2660620 motB Bordetella bronchiseptica RB50 flagellar motor protein MotB NP_889083.1 2705808 D 257310 CDS NP_889084.1 33601524 2661001 2706770..2707150 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1026; chemotaxis protein CheY 2707150 cheY 2661001 cheY Bordetella bronchiseptica RB50 chemotaxis protein CheY NP_889084.1 2706770 D 257310 CDS NP_889085.1 33601525 2660464 2707177..2709240 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1028; chemotaxis protein CheA 2709240 cheA 2660464 cheA Bordetella bronchiseptica RB50 chemotaxis protein CheA NP_889085.1 2707177 D 257310 CDS NP_889086.1 33601526 2661017 2709255..2709755 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1029; chemotaxis protein CheW 2709755 cheW 2661017 cheW Bordetella bronchiseptica RB50 chemotaxis protein CheW NP_889086.1 2709255 D 257310 CDS NP_889087.1 33601527 2661023 2709829..2711535 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1030; methyl-accepting chemotaxis protein I 2711535 tsr 2661023 tsr Bordetella bronchiseptica RB50 methyl-accepting chemotaxis protein I NP_889087.1 2709829 D 257310 CDS NP_889088.1 33601528 2661038 2711544..2712404 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1031; chemotaxis protein methyltransferase 2712404 cheR 2661038 cheR Bordetella bronchiseptica RB50 chemotaxis protein methyltransferase NP_889088.1 2711544 D 257310 CDS NP_889089.1 33601529 2660852 2712401..2713453 1 NC_002927.3 regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase 2713453 cheB 2660852 cheB Bordetella bronchiseptica RB50 chemotaxis-specific methylesterase NP_889089.1 2712401 D 257310 CDS NP_889090.1 33601530 2659526 2713506..2713895 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1033; chemotaxis protein CheY 2713895 cheY 2659526 cheY Bordetella bronchiseptica RB50 chemotaxis protein CheY NP_889090.1 2713506 D 257310 CDS NP_889091.1 33601531 2659527 2713904..2714536 1 NC_002927.3 cytosolic phosphatase which functions in the chemotaxis signal transduction complex by controlling the level of phosphorylated CheY through dephosphorylation; chemotaxis regulator CheZ 2714536 cheZ 2659527 cheZ Bordetella bronchiseptica RB50 chemotaxis regulator CheZ NP_889091.1 2713904 D 257310 CDS NP_889092.1 33601532 2660354 2714764..2715918 1 NC_002927.3 membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB 2715918 flhB 2660354 flhB Bordetella bronchiseptica RB50 flagellar biosynthesis protein FlhB NP_889092.1 2714764 D 257310 CDS NP_889093.1 33601533 2660978 2715922..2718039 1 NC_002927.3 membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 2718039 flhA 2660978 flhA Bordetella bronchiseptica RB50 flagellar biosynthesis protein FlhA NP_889093.1 2715922 D 257310 CDS NP_889094.1 33601534 2661558 2718036..2720408 1 NC_002927.3 positive regulator of class III flagellar genes; flagellar biosynthesis regulator FlhF 2720408 flhF 2661558 flhF Bordetella bronchiseptica RB50 flagellar biosynthesis regulator FlhF NP_889094.1 2718036 D 257310 CDS NP_889095.1 33601535 2661475 complement(2720426..2720908) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1370; hypothetical protein 2720908 2661475 BB2556 Bordetella bronchiseptica RB50 hypothetical protein NP_889095.1 2720426 R 257310 CDS NP_889096.1 33601536 2661476 complement(2720925..2721215) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1371; negative regulator of flagellin synthesis 2721215 flgM 2661476 flgM Bordetella bronchiseptica RB50 negative regulator of flagellin synthesis NP_889096.1 2720925 R 257310 CDS NP_889097.1 33601537 2661477 complement(2721342..2722052) 1 NC_002927.3 required for the assembly of the flagellar basal body P-ring; flagellar basal body P-ring biosynthesis protein FlgA 2722052 flgA 2661477 flgA Bordetella bronchiseptica RB50 flagellar basal body P-ring biosynthesis protein FlgA NP_889097.1 2721342 R 257310 CDS NP_889098.1 33601538 2659455 2722236..2722643 1 NC_002927.3 with FlgF and C makes up the proximal portion of the flagellar basal body rod; Vibrio parahaemolyticus protein is associated with the polar flagella; flagellar basal body rod protein FlgB 2722643 flgB 2659455 flgB Bordetella bronchiseptica RB50 flagellar basal body rod protein FlgB NP_889098.1 2722236 D 257310 CDS NP_889099.1 33601539 2659544 2722656..2723075 1 NC_002927.3 with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC 2723075 flgC 2659544 flgC Bordetella bronchiseptica RB50 flagellar basal body rod protein FlgC NP_889099.1 2722656 D 257310 CDS NP_889100.1 33601540 2659946 2723123..2723827 1 NC_002927.3 acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; flagellar basal body rod modification protein 2723827 flgD 2659946 flgD Bordetella bronchiseptica RB50 flagellar basal body rod modification protein NP_889100.1 2723123 D 257310 CDS NP_889101.1 33601541 2659947 2723894..2725315 1 NC_002927.3 the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE 2725315 flgE 2659947 flgE Bordetella bronchiseptica RB50 flagellar hook protein FlgE NP_889101.1 2723894 D 257310 CDS NP_889102.1 33601542 2659896 2725354..2726118 1 NC_002927.3 FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgF 2726118 flgF 2659896 flgF Bordetella bronchiseptica RB50 flagellar basal body rod protein FlgF NP_889102.1 2725354 D 257310 CDS NP_889103.1 33601543 2661208 2726162..2726947 1 NC_002927.3 makes up the distal portion of the flagellar basal body rod; flagellar basal body rod protein FlgG 2726947 flgG 2661208 flgG Bordetella bronchiseptica RB50 flagellar basal body rod protein FlgG NP_889103.1 2726162 D 257310 CDS NP_889104.1 33601544 2659762 2726944..2727636 1 NC_002927.3 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar basal body L-ring protein 2727636 flgH 2659762 flgH Bordetella bronchiseptica RB50 flagellar basal body L-ring protein NP_889104.1 2726944 D 257310 CDS NP_889105.1 33601545 2660829 2727639..2728772 1 NC_002927.3 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein 2728772 flgI 2660829 flgI Bordetella bronchiseptica RB50 flagellar basal body P-ring protein NP_889105.1 2727639 D 257310 CDS NP_889106.1 33601546 2660830 2728790..2729809 1 NC_002927.3 Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space; flagellar rod assembly protein/muramidase FlgJ 2729809 flgJ 2660830 flgJ Bordetella bronchiseptica RB50 flagellar rod assembly protein/muramidase FlgJ NP_889106.1 2728790 D 257310 CDS NP_889107.1 33601547 2661941 2729879..2731525 1 NC_002927.3 with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgK 2731525 flgK 2661941 flgK Bordetella bronchiseptica RB50 flagellar hook-associated protein FlgK NP_889107.1 2729879 D 257310 CDS NP_889108.1 33601548 2661196 2731559..2733091 1 NC_002927.3 With FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgL 2733091 flgL 2661196 flgL Bordetella bronchiseptica RB50 flagellar hook-associated protein FlgL NP_889108.1 2731559 D 257310 CDS NP_889109.1 33601549 2661197 2733170..2735002 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1384; methyl-accepting chemotaxis protein I 2735002 tsr 2661197 tsr Bordetella bronchiseptica RB50 methyl-accepting chemotaxis protein I NP_889109.1 2733170 D 257310 CDS NP_889110.1 33601550 2660767 2736988..2737431 1 NC_002927.3 no significant database matches; lipoprotein 2737431 2660767 BB2573 Bordetella bronchiseptica RB50 lipoprotein NP_889110.1 2736988 D 257310 CDS NP_889111.1 33601551 2662665 2737658..2739268 1 NC_002927.3 Similar to Salmonella typhimurium methyl-accepting chemotaxis protein ii tar or chem or stm1919 SWALL:MCP2_SALTY (SWALL:P02941) (553 aa) fasta scores: E(): 1.8e-65, 47.92% id in 530 aa, and to Escherichia coli methyl-accepting chemotaxis protein ii tar or chem or b1886 SWALL:MCP2_ECOLI (SWALL:P07017) (553 aa) fasta scores: E(): 1.1e-63, 47.81% id in 525 aa; methyl-accepting chemotaxis protein 2739268 tar 2662665 tar Bordetella bronchiseptica RB50 methyl-accepting chemotaxis protein NP_889111.1 2737658 D 257310 CDS NP_889112.1 33601552 2662181 2739447..2741045 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1386; methyl-accepting chemotaxis protein 2741045 2662181 BB2575 Bordetella bronchiseptica RB50 methyl-accepting chemotaxis protein NP_889112.1 2739447 D 257310 CDS NP_889113.1 33601553 2661958 complement(2741150..2741938) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1389; flagellar biosynthetic protein 2741938 fliR 2661958 fliR Bordetella bronchiseptica RB50 flagellar biosynthetic protein NP_889113.1 2741150 R 257310 CDS NP_889114.1 33601554 2661033 complement(2741961..2742230) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1390; flagellar biosynthetic protein FliQ 2742230 fliQ 2661033 fliQ Bordetella bronchiseptica RB50 flagellar biosynthetic protein FliQ NP_889114.1 2741961 R 257310 CDS NP_889115.1 33601555 2663954 complement(2742247..2743038) 1 NC_002927.3 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 2743038 fliP 2663954 fliP Bordetella bronchiseptica RB50 flagellar biosynthesis protein FliP NP_889115.1 2742247 R 257310 CDS NP_889116.1 33601556 2660927 complement(2743050..2743391) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1392; flagellar protein FliO 2743391 fliO 2660927 fliO Bordetella bronchiseptica RB50 flagellar protein FliO NP_889116.1 2743050 R 257310 CDS NP_889117.1 33601557 2660490 complement(2743402..2743920) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1393; flagellar motor switch protein 2743920 fliN 2660490 fliN Bordetella bronchiseptica RB50 flagellar motor switch protein NP_889117.1 2743402 R 257310 CDS NP_889118.1 33601558 2661030 complement(2743913..2744923) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1394; flagellar motor switch protein FliM 2744923 fliM 2661030 fliM Bordetella bronchiseptica RB50 flagellar motor switch protein FliM NP_889118.1 2743913 R 257310 CDS NP_889119.1 33601559 2660991 complement(2744926..2745498) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1395; flagellar protein FliL 2745498 fliL 2660991 fliL Bordetella bronchiseptica RB50 flagellar protein FliL NP_889119.1 2744926 R 257310 CDS NP_889120.1 33601560 2660992 complement(2745640..2746983) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1398; flagellar hook-length control protein 2746983 fliK 2660992 fliK Bordetella bronchiseptica RB50 flagellar hook-length control protein NP_889120.1 2745640 R 257310 CDS NP_889121.1 33601561 2659966 complement(2746989..2747435) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1399; flagellar protein FliJ 2747435 fliJ 2659966 fliJ Bordetella bronchiseptica RB50 flagellar protein FliJ NP_889121.1 2746989 R 257310 CDS NP_889122.1 33601562 2659428 complement(2747428..2748903) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1400; flagellum-specific ATP synthase FliI 2748903 fliI 2659428 fliI Bordetella bronchiseptica RB50 flagellum-specific ATP synthase FliI NP_889122.1 2747428 R 257310 CDS NP_889123.1 33601563 2660850 complement(2748900..2749655) 1 NC_002927.3 binds to and inhibits the function of flagella specific ATPase FliI; flagellar assembly protein H 2749655 fliH 2660850 fliH Bordetella bronchiseptica RB50 flagellar assembly protein H NP_889123.1 2748900 R 257310 CDS NP_889124.1 33601564 2662041 complement(2749648..2750658) 1 NC_002927.3 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G 2750658 fliG 2662041 fliG Bordetella bronchiseptica RB50 flagellar motor switch protein G NP_889124.1 2749648 R 257310 CDS NP_889125.1 33601565 2662174 complement(2750648..2752324) 1 NC_002927.3 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein 2752324 fliF 2662174 fliF Bordetella bronchiseptica RB50 flagellar MS-ring protein NP_889125.1 2750648 R 257310 CDS NP_889126.1 33601566 2659384 2752637..2752969 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1404; flagellar hook-basal body complex protein FliE 2752969 fliE 2659384 fliE Bordetella bronchiseptica RB50 flagellar hook-basal body complex protein FliE NP_889126.1 2752637 D 257310 CDS NP_889127.1 33601567 2659385 complement(2752983..2753378) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1405; hypothetical protein 2753378 2659385 BB2590 Bordetella bronchiseptica RB50 hypothetical protein NP_889127.1 2752983 R 257310 CDS NP_889128.1 33601568 2661181 complement(2753388..2753702) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1406; flagellar protein 2753702 2661181 BB2591 Bordetella bronchiseptica RB50 flagellar protein NP_889128.1 2753388 R 257310 CDS NP_889129.1 33601569 2661182 complement(2753699..2754970) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1407; hypothetical protein 2754970 2661182 BB2592 Bordetella bronchiseptica RB50 hypothetical protein NP_889129.1 2753699 R 257310 CDS NP_889130.1 33601570 2661183 complement(2754967..2755347) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1408; flagellar protein FliT 2755347 fliT 2661183 fliT Bordetella bronchiseptica RB50 flagellar protein FliT NP_889130.1 2754967 R 257310 CDS NP_889131.1 33601571 2659344 complement(2755365..2755793) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1409; flagellar protein FliS 2755793 fliS 2659344 fliS Bordetella bronchiseptica RB50 flagellar protein FliS NP_889131.1 2755365 R 257310 CDS NP_889132.1 33601572 2659345 complement(2755801..2757174) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1410; flagellar hook-associated protein 2 2757174 fliD 2659345 fliD Bordetella bronchiseptica RB50 flagellar hook-associated protein 2 NP_889132.1 2755801 R 257310 CDS NP_889133.1 33601573 2658983 complement(2757315..2757692) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1411; Similar to Pseudomonas aeruginosa FlaG SWALL:O33420 (EMBL:L81176) (128 aa) fasta scores: E(): 0.035, 31.35% id in 118 aa, and to Aeromonas salmonicida FlaGellin protein flaG SWALL:O30378 (EMBL:AF002709) (146 aa) fasta scores: E(): 1.9, 35.48% id in 62 aa; flagellar protein 2757692 flaG 2658983 flaG Bordetella bronchiseptica RB50 flagellar protein NP_889133.1 2757315 R 257310 CDS NP_889134.1 33601574 2658984 2758182..2759489 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1412; bifunctional folylpolyglutamate synthase/dihydrofolate synthase FolC 2759489 folC 2658984 folC Bordetella bronchiseptica RB50 bifunctional folylpolyglutamate synthase/dihydrofolate synthase FolC NP_889134.1 2758182 D 257310 CDS NP_889135.1 33601575 2662648 2759550..2760380 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1413; hypothetical protein 2760380 2662648 BB2598 Bordetella bronchiseptica RB50 hypothetical protein NP_889135.1 2759550 D 257310 CDS NP_889136.1 33601576 2662649 2760377..2760865 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1414; colicin V production protein 2760865 cvpA 2662649 cvpA Bordetella bronchiseptica RB50 colicin V production protein NP_889136.1 2760377 D 257310 CDS NP_889137.1 33601577 2662660 2760907..2762427 1 NC_002927.3 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 2762427 purF 2662660 purF Bordetella bronchiseptica RB50 amidophosphoribosyltransferase NP_889137.1 2760907 D 257310 CDS NP_889138.1 33601578 2662653 complement(2762471..2762947) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1416; disulfide bond formation protein B 2762947 dsbB 2662653 dsbB Bordetella bronchiseptica RB50 disulfide bond formation protein B NP_889138.1 2762471 R 257310 CDS NP_889139.1 33601579 2662668 complement(2762998..2763711) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1416A; multiple antibiotic resistance protein 2763711 marC 2662668 marC Bordetella bronchiseptica RB50 multiple antibiotic resistance protein NP_889139.1 2762998 R 257310 CDS NP_889140.1 33601580 2662666 complement(2763750..2766347) 1 NC_002927.3 catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; PII uridylyl-transferase 2766347 glnD 2662666 glnD Bordetella bronchiseptica RB50 PII uridylyl-transferase NP_889140.1 2763750 R 257310 CDS NP_889141.1 33601581 2662681 complement(2766377..2767198) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1418; methionine aminopeptidase 2767198 map 2662681 map Bordetella bronchiseptica RB50 methionine aminopeptidase NP_889141.1 2766377 R 257310 CDS NP_889142.1 33601582 2662682 2767925..2768674 1 NC_002927.3 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 2768674 rpsB 2662682 rpsB Bordetella bronchiseptica RB50 30S ribosomal protein S2 NP_889142.1 2767925 D 257310 CDS NP_889143.2 161609272 2662629 2768858..2769736 1 NC_002927.3 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 2769736 tsf 2662629 tsf Bordetella bronchiseptica RB50 elongation factor Ts NP_889143.2 2768858 D 257310 CDS NP_889144.2 161609271 2661830 2769834..2770550 1 NC_002927.3 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 2770550 pyrH 2661830 pyrH Bordetella bronchiseptica RB50 uridylate kinase NP_889144.2 2769834 D 257310 CDS NP_889145.1 33601585 2660989 2770565..2771125 1 NC_002927.3 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 2771125 frr 2660989 frr Bordetella bronchiseptica RB50 ribosome recycling factor NP_889145.1 2770565 D 257310 CDS NP_889146.1 33601586 2660349 2771163..2772056 1 NC_002927.3 catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate; undecaprenyl pyrophosphate synthase 2772056 uppS 2660349 uppS Bordetella bronchiseptica RB50 undecaprenyl pyrophosphate synthase NP_889146.1 2771163 D 257310 CDS NP_889147.1 33601587 2660350 2772076..2772933 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1424; phosphatidate cytidylyltransferase 2772933 cdsA 2660350 cdsA Bordetella bronchiseptica RB50 phosphatidate cytidylyltransferase NP_889147.1 2772076 D 257310 CDS NP_889148.1 33601588 2659809 2772930..2774129 1 NC_002927.3 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2774129 dxr 2659809 dxr Bordetella bronchiseptica RB50 1-deoxy-D-xylulose 5-phosphate reductoisomerase NP_889148.1 2772930 D 257310 CDS NP_889149.1 33601589 2659434 2774169..2775503 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1426; hypothetical protein 2775503 2659434 BB2612 Bordetella bronchiseptica RB50 hypothetical protein NP_889149.1 2774169 D 257310 CDS NP_889150.1 33601590 2660609 2775556..2777892 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1427; surface antigen 2777892 2660609 BB2613 Bordetella bronchiseptica RB50 surface antigen NP_889150.1 2775556 D 257310 CDS NP_889151.1 33601591 2660662 2778018..2778581 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1428; outer membrane protein 2778581 2660662 BB2614 Bordetella bronchiseptica RB50 outer membrane protein NP_889151.1 2778018 D 257310 CDS NP_889152.1 33601592 2661817 2778590..2779681 1 NC_002927.3 adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 2779681 lpxD 2661817 lpxD Bordetella bronchiseptica RB50 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase NP_889152.1 2778590 D 257310 CDS NP_889153.1 33601593 2659000 2779753..2780208 1 NC_002927.3 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 2780208 fabZ 2659000 fabZ Bordetella bronchiseptica RB50 (3R)-hydroxymyristoyl-ACP dehydratase NP_889153.1 2779753 D 257310 CDS NP_889154.1 33601594 2659254 2780209..2781003 1 NC_002927.3 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase 2781003 lpxA 2659254 lpxA Bordetella bronchiseptica RB50 UDP-N-acetylglucosamine acyltransferase NP_889154.1 2780209 D 257310 CDS NP_889155.1 33601595 2661937 2781000..2782181 1 NC_002927.3 catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; lipid-A-disaccharide synthase 2782181 lpxB 2661937 lpxB Bordetella bronchiseptica RB50 lipid-A-disaccharide synthase NP_889155.1 2781000 D 257310 CDS NP_889156.1 33601596 2661938 2782168..2782773 1 NC_002927.3 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 2782773 rnhB 2661938 rnhB Bordetella bronchiseptica RB50 ribonuclease HII NP_889156.1 2782168 D 257310 CDS NP_889157.1 33601597 2659147 2782770..2783543 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1434; RNA methyltransferase 2783543 2659147 BB2620 Bordetella bronchiseptica RB50 RNA methyltransferase NP_889157.1 2782770 D 257310 CDS NP_889158.1 33601598 2662658 complement(2783555..2784382) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1435; hypothetical protein 2784382 2662658 BB2621 Bordetella bronchiseptica RB50 hypothetical protein NP_889158.1 2783555 R 257310 CDS NP_889159.1 33601599 2662661 2784543..2786906 1 NC_002927.3 catalyzes the formation of phosphoenolpyruvate from pyruvate; phosphoenolpyruvate synthase 2786906 ppsA 2662661 ppsA Bordetella bronchiseptica RB50 phosphoenolpyruvate synthase NP_889159.1 2784543 D 257310 CDS NP_889160.1 33601600 2660345 complement(2786974..2787693) 1 NC_002927.3 Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group; glutamine amidotransferase 2787693 2660345 BB2623 Bordetella bronchiseptica RB50 glutamine amidotransferase NP_889160.1 2786974 R 257310 CDS NP_889161.1 33601601 2659473 2787817..2788242 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1438; hypothetical protein 2788242 2659473 BB2624 Bordetella bronchiseptica RB50 hypothetical protein NP_889161.1 2787817 D 257310 CDS NP_889162.1 33601602 2659474 2788296..2789222 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1440; hypothetical protein 2789222 2659474 BB2625 Bordetella bronchiseptica RB50 hypothetical protein NP_889162.1 2788296 D 257310 CDS NP_889163.1 33601603 2659180 2789288..2790445 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1441; hypothetical protein 2790445 2659180 BB2626 Bordetella bronchiseptica RB50 hypothetical protein NP_889163.1 2789288 D 257310 CDS NP_889164.1 33601604 2660294 complement(2790426..2790893) 1 NC_002927.3 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 2790893 smpB 2660294 smpB Bordetella bronchiseptica RB50 SsrA-binding protein NP_889164.1 2790426 R 257310 CDS NP_889165.1 33601605 2661623 2790959..2791393 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1443; hypothetical protein 2791393 2661623 BB2628 Bordetella bronchiseptica RB50 hypothetical protein NP_889165.1 2790959 D 257310 CDS NP_889166.1 33601606 2662032 2791383..2791733 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1444; hypothetical protein 2791733 2662032 BB2629 Bordetella bronchiseptica RB50 hypothetical protein NP_889166.1 2791383 D 257310 CDS NP_889167.1 33601607 2659346 2791930..2793084 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1445; acyl-CoA dehydrogenase 2793084 2659346 BB2630 Bordetella bronchiseptica RB50 acyl-CoA dehydrogenase NP_889167.1 2791930 D 257310 CDS NP_889168.1 33601608 2662084 2793081..2794253 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1446; enoly-CoA hydratase 2794253 2662084 BB2631 Bordetella bronchiseptica RB50 enoly-CoA hydratase NP_889168.1 2793081 D 257310 CDS NP_889169.1 33601609 2662085 2794301..2795194 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1447; 3-hydroxyisobutyrate dehydrogenase 2795194 mmsB 2662085 mmsB Bordetella bronchiseptica RB50 3-hydroxyisobutyrate dehydrogenase NP_889169.1 2794301 D 257310 CDS NP_889170.1 33601610 2662194 2795240..2795677 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1448; hypothetical protein 2795677 2662194 BB2633 Bordetella bronchiseptica RB50 hypothetical protein NP_889170.1 2795240 D 257310 CDS NP_889171.1 33601611 2660346 2795737..2796426 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1449; hypothetical protein 2796426 2660346 BB2634 Bordetella bronchiseptica RB50 hypothetical protein NP_889171.1 2795737 D 257310 CDS NP_889172.1 33601612 2660347 complement(2796436..2797452) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1845; hypothetical protein 2797452 2660347 BB2635 Bordetella bronchiseptica RB50 hypothetical protein NP_889172.1 2796436 R 257310 CDS NP_889173.1 33601613 2662044 2797619..2798665 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1846; hypothetical protein 2798665 2662044 BB2636 Bordetella bronchiseptica RB50 hypothetical protein NP_889173.1 2797619 D 257310 CDS NP_889174.1 33601614 2662127 2798662..2799288 1 NC_002927.3 catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase 2799288 tmk 2662127 tmk Bordetella bronchiseptica RB50 thymidylate kinase NP_889174.1 2798662 D 257310 CDS NP_889175.1 33601615 2660160 2799285..2800337 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1848; DNA polymerase III subunit delta' 2800337 holB 2660160 holB Bordetella bronchiseptica RB50 DNA polymerase III subunit delta' NP_889175.1 2799285 D 257310 CDS NP_889176.1 33601616 2659348 2800378..2801157 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1849; hypothetical protein 2801157 2659348 BB2639 Bordetella bronchiseptica RB50 hypothetical protein NP_889176.1 2800378 D 257310 CDS NP_889177.1 33601617 2659320 2801208..2802044 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1850; hypothetical protein 2802044 2659320 BB2640 Bordetella bronchiseptica RB50 hypothetical protein NP_889177.1 2801208 D 257310 CDS NP_889178.1 33601618 2659347 2802361..2803098 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1851; transcriptional regulator 2803098 2659347 BB2641 Bordetella bronchiseptica RB50 transcriptional regulator NP_889178.1 2802361 D 257310 CDS NP_889179.1 33601619 2660080 2803173..2803916 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1852; glutamine ABC transporter substrate-binding protein 2803916 2660080 BB2642 Bordetella bronchiseptica RB50 glutamine ABC transporter substrate-binding protein NP_889179.1 2803173 D 257310 CDS NP_889180.1 33601620 2660092 2803913..2804581 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1853; glutamine transport system permease 2804581 2660092 BB2643 Bordetella bronchiseptica RB50 glutamine transport system permease NP_889180.1 2803913 D 257310 CDS NP_889181.1 33601621 2659256 2804578..2805351 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1855; glutamine transport ATP-binding protein 2805351 glnQ 2659256 glnQ Bordetella bronchiseptica RB50 glutamine transport ATP-binding protein NP_889181.1 2804578 D 257310 CDS NP_889182.1 33601622 2659334 2805348..2806301 1 NC_002927.3 catalyzes the formation of glutamate and formamide from N-formimidoyl-L-glutamate; formimidoylglutamase 2806301 2659334 BB2645 Bordetella bronchiseptica RB50 formimidoylglutamase NP_889182.1 2805348 D 257310 CDS NP_889183.1 33601623 2659702 2806494..2807783 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1857; glutamate dehydrogenase 2807783 gdhA 2659702 gdhA Bordetella bronchiseptica RB50 glutamate dehydrogenase NP_889183.1 2806494 D 257310 CDS NP_889184.1 33601624 2660241 complement(2807859..2809355) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1858; aldehyde dehydrogenase 2809355 aldH 2660241 aldH Bordetella bronchiseptica RB50 aldehyde dehydrogenase NP_889184.1 2807859 R 257310 CDS NP_889185.1 33601625 2660154 complement(2809405..2810652) 1 NC_002927.3 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase 2810652 amaB 2660154 amaB Bordetella bronchiseptica RB50 allantoate amidohydrolase NP_889185.1 2809405 R 257310 CDS NP_889186.1 33601626 2660163 complement(2810662..2812371) 1 NC_002927.3 catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; also known as acetolactate synthase large subunit; thiamine pyrophosphate protein 2812371 ilvG 2660163 ilvG Bordetella bronchiseptica RB50 thiamine pyrophosphate protein NP_889186.1 2810662 R 257310 CDS NP_889187.1 33601627 2661719 complement(2812368..2813306) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1861; citrate lyase subunit beta 2813306 citE 2661719 citE Bordetella bronchiseptica RB50 citrate lyase subunit beta NP_889187.1 2812368 R 257310 CDS NP_889188.1 33601628 2661720 complement(2813303..2814586) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1862; hypothetical protein 2814586 2661720 BB2651 Bordetella bronchiseptica RB50 hypothetical protein NP_889188.1 2813303 R 257310 CDS NP_889189.1 33601629 2659406 complement(2814590..2815072) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1863; hypothetical protein 2815072 2659406 BB2652 Bordetella bronchiseptica RB50 hypothetical protein NP_889189.1 2814590 R 257310 CDS NP_889190.1 33601630 2661624 complement(2815073..2816068) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1864; hypothetical protein 2816068 2661624 BB2653 Bordetella bronchiseptica RB50 hypothetical protein NP_889190.1 2815073 R 257310 CDS NP_889191.1 33601631 2661704 complement(2816232..2816951) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1865; GntR family transcriptional regulator 2816951 2661704 BB2654 Bordetella bronchiseptica RB50 GntR family transcriptional regulator NP_889191.1 2816232 R 257310 CDS NP_889192.1 33601632 2661191 complement(2817068..2817451) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1867; hypothetical protein 2817451 2661191 BB2655 Bordetella bronchiseptica RB50 hypothetical protein NP_889192.1 2817068 R 257310 CDS NP_889193.1 33601633 2661192 2817506..2817988 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1868; cytochrome 2817988 2661192 BB2656 Bordetella bronchiseptica RB50 cytochrome NP_889193.1 2817506 D 257310 CDS NP_889194.1 33601634 2661267 complement(2818001..2819698) 1 NC_002927.3 hypothetical protein 2819698 2661267 BB2657 Bordetella bronchiseptica RB50 hypothetical protein NP_889194.1 2818001 R 257310 CDS NP_889195.1 33601635 2660173 complement(2819803..2821176) 1 NC_002927.3 glutamate decarboxylase 2821176 2660173 BB2658 Bordetella bronchiseptica RB50 glutamate decarboxylase NP_889195.1 2819803 R 257310 CDS NP_889196.1 33601636 2660235 complement(2821582..2823435) 1 NC_002927.3 hypothetical protein 2823435 2660235 BB2659 Bordetella bronchiseptica RB50 hypothetical protein NP_889196.1 2821582 R 257310 CDS NP_889197.1 33601637 2661808 2823548..2825050 1 NC_002927.3 hypothetical protein 2825050 2661808 BB2660 Bordetella bronchiseptica RB50 hypothetical protein NP_889197.1 2823548 D 257310 CDS NP_889198.1 33601638 2661754 2825155..2825706 1 NC_002927.3 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; possibly involved in prevention of copper toxicity; RNA polymerase sigma factor 2825706 2661754 BB2661 Bordetella bronchiseptica RB50 RNA polymerase sigma factor NP_889198.1 2825155 D 257310 CDS NP_889199.1 33601639 2661755 2825711..2826502 1 NC_002927.3 hypothetical protein 2826502 2661755 BB2662 Bordetella bronchiseptica RB50 hypothetical protein NP_889199.1 2825711 D 257310 CDS NP_889200.1 33601640 2660212 2826591..2827313 1 NC_002927.3 hypothetical protein 2827313 2660212 BB2663 Bordetella bronchiseptica RB50 hypothetical protein NP_889200.1 2826591 D 257310 CDS NP_889201.1 33601641 2660213 complement(2827492..2828703) 1 NC_002927.3 two-component response regulator 2828703 2660213 BB2664 Bordetella bronchiseptica RB50 two-component response regulator NP_889201.1 2827492 R 257310 CDS NP_889202.1 33601642 2660192 2829017..2829526 1 NC_002927.3 hypothetical protein 2829526 2660192 BB2665 Bordetella bronchiseptica RB50 hypothetical protein NP_889202.1 2829017 D 257310 CDS NP_889203.1 33601643 2660193 2829593..2830444 1 NC_002927.3 transmembrane regulator 2830444 2660193 BB2666 Bordetella bronchiseptica RB50 transmembrane regulator NP_889203.1 2829593 D 257310 CDS NP_889204.1 33601644 2660194 2830638..2831075 1 NC_002927.3 universal stress protein 2831075 2660194 BB2667 Bordetella bronchiseptica RB50 universal stress protein NP_889204.1 2830638 D 257310 CDS NP_889205.1 33601645 2660245 2831176..2832165 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1176; succinylglutamate desuccinylase 2832165 astE 2660245 astE Bordetella bronchiseptica RB50 succinylglutamate desuccinylase NP_889205.1 2831176 D 257310 CDS NP_889206.1 33601646 2660246 2832249..2832617 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1175; hypothetical protein 2832617 2660246 BB2669 Bordetella bronchiseptica RB50 hypothetical protein NP_889206.1 2832249 D 257310 CDS NP_889207.1 33601647 2661643 complement(2832695..2833303) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1174; hypothetical protein 2833303 2661643 BB2670 Bordetella bronchiseptica RB50 hypothetical protein NP_889207.1 2832695 R 257310 CDS NP_889208.1 33601648 2661644 2833372..2834964 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1172; hypothetical protein 2834964 2661644 BB2671 Bordetella bronchiseptica RB50 hypothetical protein NP_889208.1 2833372 D 257310 CDS NP_889209.1 33601649 2661659 complement(2834979..2835557) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1171; hypothetical protein 2835557 2661659 BB2672 Bordetella bronchiseptica RB50 hypothetical protein NP_889209.1 2834979 R 257310 CDS NP_889210.1 33601650 2661660 complement(2835582..2836535) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1170; hypothetical protein 2836535 2661660 BB2673 Bordetella bronchiseptica RB50 hypothetical protein NP_889210.1 2835582 R 257310 CDS NP_889211.1 33601651 2661691 complement(2836575..2837492) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1169; oxidoreductase 2837492 2661691 BB2674 Bordetella bronchiseptica RB50 oxidoreductase NP_889211.1 2836575 R 257310 CDS NP_889212.1 33601652 2660024 2837614..2838540 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1168; LysR family transcriptional regulator 2838540 2660024 BB2675 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_889212.1 2837614 D 257310 CDS NP_889213.1 33601653 2661681 complement(2838548..2839294) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1167; hypothetical protein 2839294 2661681 BB2676 Bordetella bronchiseptica RB50 hypothetical protein NP_889213.1 2838548 R 257310 CDS NP_889214.1 33601654 2659306 2839621..2840562 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1166; muramoyltetrapeptide carboxypeptidase 2840562 ldcA 2659306 ldcA Bordetella bronchiseptica RB50 muramoyltetrapeptide carboxypeptidase NP_889214.1 2839621 D 257310 CDS NP_889215.1 33601655 2659307 complement(2840638..2840760) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1165A; hypothetical protein 2840760 2659307 BB2678 Bordetella bronchiseptica RB50 hypothetical protein NP_889215.1 2840638 R 257310 CDS NP_889216.1 33601656 2662150 complement(2840789..2842687) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1165; sodium/solute symporter 2842687 2662150 BB2679 Bordetella bronchiseptica RB50 sodium/solute symporter NP_889216.1 2840789 R 257310 CDS NP_889217.1 33601657 2660342 complement(2842921..2844375) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1164; hypothetical protein 2844375 2660342 BB2680 Bordetella bronchiseptica RB50 hypothetical protein NP_889217.1 2842921 R 257310 CDS NP_889218.1 33601658 2660343 complement(2844529..2845308) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1163; short-chain dehydrogenase 2845308 2660343 BB2681 Bordetella bronchiseptica RB50 short-chain dehydrogenase NP_889218.1 2844529 R 257310 CDS NP_889219.1 33601659 2658951 complement(2845433..2846317) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1162; LysR family transcriptional regulator 2846317 2658951 BB2682 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_889219.1 2845433 R 257310 CDS NP_889220.1 33601660 2659422 2846417..2847541 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1161; racemase 2847541 2659422 BB2683 Bordetella bronchiseptica RB50 racemase NP_889220.1 2846417 D 257310 CDS NP_889221.1 33601661 2660209 2847587..2848549 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1160; lipoprotein 2848549 2660209 BB2684 Bordetella bronchiseptica RB50 lipoprotein NP_889221.1 2847587 D 257310 CDS NP_889222.1 33601662 2661084 2848542..2849396 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1159; 2-pyrone-4,6-dicarboxylic acid hydrolase 2849396 2661084 BB2685 Bordetella bronchiseptica RB50 2-pyrone-4,6-dicarboxylic acid hydrolase NP_889222.1 2848542 D 257310 CDS NP_889223.1 33601663 2659979 2849502..2849912 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1158; dioxygenase 2849912 2659979 BB2686 Bordetella bronchiseptica RB50 dioxygenase NP_889223.1 2849502 D 257310 CDS NP_889224.1 33601664 2659980 complement(2849941..2851152) 1 NC_002927.3 hypothetical protein 2851152 2659980 BB2687 Bordetella bronchiseptica RB50 hypothetical protein NP_889224.1 2849941 R 257310 CDS NP_889225.1 33601665 2662550 complement(2851199..2851423) 1 NC_002927.3 biotin protein 2851423 madF 2662550 madF Bordetella bronchiseptica RB50 biotin protein NP_889225.1 2851199 R 257310 CDS NP_889226.1 33601666 2662551 complement(2851444..2852808) 1 NC_002927.3 Similar to Escherichia coli biotin carboxylase accc or fabg or b3256 SWALL:ACCC_ECOLI (SWALL:P24182) (449 aa) fasta scores: E(): 4.6e-68, 47.81% id in 435 aa, and to Ralstonia solanacearum probable biotin carboxylase accc1 or rsc2787 or rs00060 SWALL:Q8XVP3 (EMBL:AL646071) (456 aa) fasta scores: E(): 7.7e-72, 50.7% id in 428 aa; biotin carboxylase 2852808 accC 2662551 accC Bordetella bronchiseptica RB50 biotin carboxylase NP_889226.1 2851444 R 257310 CDS NP_889227.1 33601667 2659572 complement(2852818..2854350) 1 NC_002927.3 Similar to Sulfolobus metallicus carboxyl transferase PccB SWALL:O52601 (EMBL:AF042099) (517 aa) fasta scores: E(): 1.8e-49, 32.59% id in 497 aa, and to Archaeoglobus fulgidus methylmalonyl-CoA decarboxylase, subunit alpha af2217 SWALL:O28066 (EMBL:AE000952) (516 aa) fasta scores: E(): 1.1e-54, 35.81% id in 497 aa; carboxyl transferase 2854350 2659572 BB2690 Bordetella bronchiseptica RB50 carboxyl transferase NP_889227.1 2852818 R 257310 CDS NP_889228.1 33601668 2661683 complement(2854403..2855383) 1 NC_002927.3 Similar to Rhizobium meliloti hypothetical protein ra1058 or sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 6.9e-35, 37.46% id in 323 aa, and to Variovorax paradoxus, and Burkholderia cepacia 2,4-diphenoxyacetic acid gene cluster SWALL:Q9RHQ7 (EMBL:AB028643) (337 aa) fasta scores: E(): 7.1e-33, 36.57% id in 309 aa; hypothetical protein 2855383 2661683 BB2691 Bordetella bronchiseptica RB50 hypothetical protein NP_889228.1 2854403 R 257310 CDS NP_889229.1 33601669 2662465 2855517..2856068 1 NC_002927.3 Similar to Rhizobium loti hypothetical protein Mlr2046 SWALL:Q98J90 (EMBL:AP002998) (151 aa) fasta scores: E(): 0.0027, 29.56% id in 115 aa; hypothetical protein 2856068 2662465 BB2692 Bordetella bronchiseptica RB50 hypothetical protein NP_889229.1 2855517 D 257310 CDS NP_889230.1 33601670 2662466 complement(2856160..2857446) 1 NC_002927.3 Similar to Ralstonia solanacearum oxidoreductase rsc3407 or rs01716 SWALL:Q8XTY8 (EMBL:AL646075) (435 aa) fasta scores: E(): 2.3e-85, 56% id in 425 aa, and to Rhizobium loti probable oxidoreductase mll7103 SWALL:Q987C9 (EMBL:AP003011) (427 aa) fasta scores: E(): 2.3e-56, 44.39% id in 419 aa; FAD dependent oxidoreductase 2857446 2662466 BB2693 Bordetella bronchiseptica RB50 FAD dependent oxidoreductase NP_889230.1 2856160 R 257310 CDS NP_889231.1 33601671 2662467 complement(2857454..2859694) 1 NC_002927.3 large subunit of N,N-dimethylformamidase 2859694 dmfA2 2662467 dmfA2 Bordetella bronchiseptica RB50 large subunit of N,N-dimethylformamidase NP_889231.1 2857454 R 257310 CDS NP_889232.1 33601672 2661796 complement(2859751..2860059) 1 NC_002927.3 small subunit of N,N-dimethylformamidase 2860059 dmfA1 2661796 dmfA1 Bordetella bronchiseptica RB50 small subunit of N,N-dimethylformamidase NP_889232.1 2859751 R 257310 CDS NP_889233.1 33601673 2661797 complement(2860086..2860877) 1 NC_002927.3 ABC transporter permease 2860877 2661797 BB2696 Bordetella bronchiseptica RB50 ABC transporter permease NP_889233.1 2860086 R 257310 CDS NP_889234.1 33601674 2661814 complement(2860879..2861718) 1 NC_002927.3 ABC transporter permease 2861718 2661814 BB2697 Bordetella bronchiseptica RB50 ABC transporter permease NP_889234.1 2860879 R 257310 CDS NP_889235.1 33601675 2662676 complement(2861729..2862781) 1 NC_002927.3 ABC transporter substrate-binding protein 2862781 2662676 BB2698 Bordetella bronchiseptica RB50 ABC transporter substrate-binding protein NP_889235.1 2861729 R 257310 CDS NP_889236.1 33601676 2662684 complement(2862807..2863895) 1 NC_002927.3 ABC transporter ATP-binding protein 2863895 2662684 BB2699 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_889236.1 2862807 R 257310 CDS NP_889237.1 33601677 2662723 2864044..2864838 1 NC_002927.3 transcriptional regulator 2864838 2662723 BB2700 Bordetella bronchiseptica RB50 transcriptional regulator NP_889237.1 2864044 D 257310 CDS NP_889238.1 33601678 2662759 complement(2864849..2865628) 1 NC_002927.3 dehydrogenase 2865628 2662759 BB2701 Bordetella bronchiseptica RB50 dehydrogenase NP_889238.1 2864849 R 257310 CDS NP_889239.1 33601679 2662801 complement(2865640..2866386) 1 NC_002927.3 carboxymethylenebutenolidase 2866386 2662801 BB2702 Bordetella bronchiseptica RB50 carboxymethylenebutenolidase NP_889239.1 2865640 R 257310 CDS NP_889240.1 33601680 2662802 complement(2866383..2867126) 1 NC_002927.3 transcriptional regulator 2867126 2662802 BB2703 Bordetella bronchiseptica RB50 transcriptional regulator NP_889240.1 2866383 R 257310 CDS NP_889241.1 33601681 2662941 complement(2867132..2868418) 1 NC_002927.3 hypothetical protein 2868418 2662941 BB2704 Bordetella bronchiseptica RB50 hypothetical protein NP_889241.1 2867132 R 257310 CDS NP_889242.1 33601682 2662957 complement(2868438..2868953) 1 NC_002927.3 hypothetical protein 2868953 2662957 BB2705 Bordetella bronchiseptica RB50 hypothetical protein NP_889242.1 2868438 R 257310 CDS NP_889243.1 33601683 2663042 complement(2868964..2869965) 1 NC_002927.3 hypothetical protein 2869965 2663042 BB2706 Bordetella bronchiseptica RB50 hypothetical protein NP_889243.1 2868964 R 257310 CDS NP_889244.1 33601684 2663043 complement(2870077..2871060) 1 NC_002927.3 agmatinase 2871060 2663043 BB2707 Bordetella bronchiseptica RB50 agmatinase NP_889244.1 2870077 R 257310 CDS NP_889245.1 33601685 2663095 complement(2871126..2872121) 1 NC_002927.3 hypothetical protein 2872121 2663095 BB2708 Bordetella bronchiseptica RB50 hypothetical protein NP_889245.1 2871126 R 257310 CDS NP_889246.1 33601686 2663101 2872297..2873199 1 NC_002927.3 LysR family transcriptional regulator 2873199 2663101 BB2709 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_889246.1 2872297 D 257310 CDS NP_889247.1 33601687 2663165 complement(2873207..2873992) 1 NC_002927.3 hypothetical protein 2873992 2663165 BB2710 Bordetella bronchiseptica RB50 hypothetical protein NP_889247.1 2873207 R 257310 CDS NP_889248.1 33601688 2663186 complement(2873989..2874726) 1 NC_002927.3 hypothetical protein 2874726 2663186 BB2711 Bordetella bronchiseptica RB50 hypothetical protein NP_889248.1 2873989 R 257310 CDS NP_889249.1 33601689 2663187 complement(2874827..2875912) 1 NC_002927.3 sugar ABC transport system, substrate-binding protein 2875912 2663187 BB2712 Bordetella bronchiseptica RB50 sugar ABC transport system, substrate-binding protein NP_889249.1 2874827 R 257310 CDS NP_889250.1 33601690 2663194 complement(2875953..2876918) 1 NC_002927.3 sugar ABC transport system, permease 2876918 2663194 BB2713 Bordetella bronchiseptica RB50 sugar ABC transport system, permease NP_889250.1 2875953 R 257310 CDS NP_889251.1 33601691 2663232 complement(2876908..2878461) 1 NC_002927.3 sugar ABC transporter ATP-binding protein 2878461 2663232 BB2714 Bordetella bronchiseptica RB50 sugar ABC transporter ATP-binding protein NP_889251.1 2876908 R 257310 CDS NP_889252.1 33601692 2663355 complement(2878501..2879385) 1 NC_002927.3 hypothetical protein 2879385 2663355 BB2715 Bordetella bronchiseptica RB50 hypothetical protein NP_889252.1 2878501 R 257310 CDS NP_889253.1 33601693 2663381 complement(2879410..2879829) 1 NC_002927.3 hypothetical protein 2879829 2663381 BB2716 Bordetella bronchiseptica RB50 hypothetical protein NP_889253.1 2879410 R 257310 CDS NP_889254.1 33601694 2663382 complement(2879886..2881238) 1 NC_002927.3 dipeptidase 2881238 2663382 BB2717 Bordetella bronchiseptica RB50 dipeptidase NP_889254.1 2879886 R 257310 CDS NP_889255.1 33601695 2663436 complement(2881247..2882086) 1 NC_002927.3 hydrolase 2882086 2663436 BB2718 Bordetella bronchiseptica RB50 hydrolase NP_889255.1 2881247 R 257310 CDS NP_889256.1 33601696 2663437 2882246..2882938 1 NC_002927.3 regulatory protein 2882938 2663437 BB2719 Bordetella bronchiseptica RB50 regulatory protein NP_889256.1 2882246 D 257310 CDS NP_889257.1 33601697 2663462 complement(2882985..2884331) 1 NC_002927.3 hypothetical protein 2884331 2663462 BB2720 Bordetella bronchiseptica RB50 hypothetical protein NP_889257.1 2882985 R 257310 CDS NP_889258.1 33601698 2663463 complement(2884328..2884699) 1 NC_002927.3 transcriptional regulator 2884699 2663463 BB2721 Bordetella bronchiseptica RB50 transcriptional regulator NP_889258.1 2884328 R 257310 CDS NP_889259.1 33601699 2663476 2884970..2885425 1 NC_002927.3 hypothetical protein 2885425 2663476 BB2722 Bordetella bronchiseptica RB50 hypothetical protein NP_889259.1 2884970 D 257310 CDS NP_889260.1 33601700 2663530 complement(2885422..2886159) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1646; hypothetical protein 2886159 2663530 BB2723 Bordetella bronchiseptica RB50 hypothetical protein NP_889260.1 2885422 R 257310 CDS NP_889261.1 33601701 2663567 complement(2886349..2887107) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1645; short-chain dehydrogenase 2887107 2663567 BB2724 Bordetella bronchiseptica RB50 short-chain dehydrogenase NP_889261.1 2886349 R 257310 CDS NP_889262.1 33601702 2663631 complement(2887154..2888143) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1644; hypothetical protein 2888143 2663631 BB2725 Bordetella bronchiseptica RB50 hypothetical protein NP_889262.1 2887154 R 257310 CDS NP_889263.1 33601703 2663632 complement(2888325..2889293) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1643; hypothetical protein 2889293 2663632 BB2726 Bordetella bronchiseptica RB50 hypothetical protein NP_889263.1 2888325 R 257310 CDS NP_889264.1 33601704 2663633 2889637..2890779 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1642; hypothetical protein 2890779 2663633 BB2727 Bordetella bronchiseptica RB50 hypothetical protein NP_889264.1 2889637 D 257310 CDS NP_889265.1 33601705 2663674 2890835..2891803 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1641; regulatory protein 2891803 2663674 BB2728 Bordetella bronchiseptica RB50 regulatory protein NP_889265.1 2890835 D 257310 CDS NP_889266.1 33601706 2663675 2891812..2892753 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1640; hypothetical protein 2892753 2663675 BB2729 Bordetella bronchiseptica RB50 hypothetical protein NP_889266.1 2891812 D 257310 CDS NP_889267.1 33601707 2663786 2892750..2893241 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1639A; hypothetical protein 2893241 2663786 BB2731 Bordetella bronchiseptica RB50 hypothetical protein NP_889267.1 2892750 D 257310 CDS NP_889268.1 33601708 2663782 2893228..2894238 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1639; hypothetical protein 2894238 2663782 BB2732 Bordetella bronchiseptica RB50 hypothetical protein NP_889268.1 2893228 D 257310 CDS NP_889269.1 33601709 2663799 2894229..2895743 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1638; hypothetical protein 2895743 2663799 BB2733 Bordetella bronchiseptica RB50 hypothetical protein NP_889269.1 2894229 D 257310 CDS NP_889270.1 33601710 2663800 2895740..2897086 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1637; hypothetical protein 2897086 2663800 BB2734 Bordetella bronchiseptica RB50 hypothetical protein NP_889270.1 2895740 D 257310 CDS NP_889271.1 33601711 2663811 2897089..2898123 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1636; nonspecific acid phosphatase precursor 2898123 2663811 BB2735 Bordetella bronchiseptica RB50 nonspecific acid phosphatase precursor NP_889271.1 2897089 D 257310 CDS NP_889272.1 33601712 2663832 2898173..2899801 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1635; arylsulfatase 2899801 2663832 BB2736 Bordetella bronchiseptica RB50 arylsulfatase NP_889272.1 2898173 D 257310 CDS NP_889273.1 33601713 2663840 2899880..2902426 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1634; hypothetical protein 2902426 2663840 BB2737 Bordetella bronchiseptica RB50 hypothetical protein NP_889273.1 2899880 D 257310 CDS NP_889274.1 33601714 2663841 2902429..2903391 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1657; hypothetical protein 2903391 2663841 BB2738 Bordetella bronchiseptica RB50 hypothetical protein NP_889274.1 2902429 D 257310 CDS NP_889275.1 33601715 2663855 complement(2903334..2905277) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1658; two-component sensor histidine kinase 2905277 2663855 BB2739 Bordetella bronchiseptica RB50 two-component sensor histidine kinase NP_889275.1 2903334 R 257310 CDS NP_889276.1 33601716 2663874 complement(2905270..2905944) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1659; response regulatory protein 2905944 2663874 BB2740 Bordetella bronchiseptica RB50 response regulatory protein NP_889276.1 2905270 R 257310 CDS NP_889277.1 33601717 2660616 2906074..2909151 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1660; autotransporter 2909151 sphB2 2660616 sphB2 Bordetella bronchiseptica RB50 autotransporter NP_889277.1 2906074 D 257310 CDS NP_889278.1 33601718 2660438 complement(2909165..2909464) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1662; DNA-binding protein 2909464 2660438 BB2742 Bordetella bronchiseptica RB50 DNA-binding protein NP_889278.1 2909165 R 257310 CDS NP_889279.1 33601719 2659335 complement(2909467..2909778) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1663; hypothetical protein 2909778 2659335 BB2743 Bordetella bronchiseptica RB50 hypothetical protein NP_889279.1 2909467 R 257310 CDS NP_889280.1 33601720 2662202 complement(2909892..2910515) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1664; glutathione S-transferase 2910515 gst 2662202 gst Bordetella bronchiseptica RB50 glutathione S-transferase NP_889280.1 2909892 R 257310 CDS NP_889281.1 33601721 2662203 complement(2910634..2911587) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1674; LysR family transcriptional regulator 2911587 2662203 BB2745 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_889281.1 2910634 R 257310 CDS NP_889282.1 33601722 2659012 2911703..2912665 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1675; hypothetical protein 2912665 2659012 BB2746 Bordetella bronchiseptica RB50 hypothetical protein NP_889282.1 2911703 D 257310 CDS NP_889283.1 33601723 2662226 2912680..2914074 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1676; sulfatase 2914074 2662226 BB2747 Bordetella bronchiseptica RB50 sulfatase NP_889283.1 2912680 D 257310 CDS NP_889284.1 33601724 2663892 2914071..2914658 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1677; hypothetical protein 2914658 2663892 BB2748 Bordetella bronchiseptica RB50 hypothetical protein NP_889284.1 2914071 D 257310 CDS NP_889285.1 33601725 2663893 complement(2914674..2915645) 1 NC_002927.3 Similar to Brucella melitensis alkanal monooxygenase alpha chain bmei0894 SWALL:Q8YHA8 (EMBL:AE009530) (327 aa) fasta scores: E(): 4.5e-57, 51.52% id in 328 aa, and to Escherichia coli hypothetical protein yhbw or b3160 SWALL:YHBW_ECOLI (SWALL:P45529) (335 aa) fasta scores: E(): 1.1e-53, 50.31% id in 318 aa; monooxygenase 2915645 2663893 BB2749 Bordetella bronchiseptica RB50 monooxygenase NP_889285.1 2914674 R 257310 CDS NP_889286.1 33601726 2663894 complement(2915698..2916795) 1 NC_002927.3 Similar to Escherichia coli N-ethylmaleimide reductase NemA or b1650 SWALL:NEMA_ECOLI (SWALL:P77258) (365 aa) fasta scores: E(): 2.2e-53, 43.83% id in 365 aa, and to Yersinia pestis morphinone reductase MorB SWALL:Q93AB5 (EMBL:AF426171) (369 aa) fasta scores: E(): 6.9e-72, 52.17% id in 368 aa; NADH:flavin oxidoreductase 2916795 2663894 BB2750 Bordetella bronchiseptica RB50 NADH:flavin oxidoreductase NP_889286.1 2915698 R 257310 CDS NP_889287.1 33601727 2659304 complement(2916803..2917819) 1 NC_002927.3 Similar to Ralstonia solanacearum hypothetical protein rsp0908 or rs01680 SWALL:Q8XRE6 (EMBL:AL646081) (319 aa) fasta scores: E(): 2e-44, 44.65% id in 318 aa, and to Pseudomonas aeruginosa hypothetical protein Pa1186 SWALL:Q9I4F2 (EMBL:AE004549) (339 aa) fasta scores: E(): 4.6e-42, 43.51% id in 324 aa; monooxygenase 2917819 2659304 BB2751 Bordetella bronchiseptica RB50 monooxygenase NP_889287.1 2916803 R 257310 CDS NP_889288.1 33601728 2662305 complement(2917936..2918862) 1 NC_002927.3 Similar to Rhizobium loti probable transcriptional regulator mlr2579 SWALL:Q98I42 (EMBL:AP003000) (304 aa) fasta scores: E(): 3.7e-37, 40.26% id in 303 aa, and to Yersinia pestis transcriptional regulator mlr2579 SWALL:Q93AB4 (EMBL:AF426171) (303 aa) fasta scores: E(): 3.4e-35, 37.37% id in 297 aa; LysR family transcriptional regulator 2918862 2662305 BB2752 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_889288.1 2917936 R 257310 CDS NP_889289.1 33601729 2659815 complement(2919039..2920247) 1 NC_002927.3 Similar to Alcaligenes eutrophus hypothetical 42.8 kDa protein SWALL:Q9RBG0 (EMBL:AF130250) (401 aa) fasta scores: E(): 1.2e-45, 40.81% id in 370 aa, and to Ralstonia solanacearum salicylate hydroxylase oxidoreductase rsp0911 or rs01683 SWALL:Q8XRE3 (EMBL:AL646081) (397 aa) fasta scores: E(): 2.9e-44, 38.77% id in 374 aa; hypothetical protein 2920247 2659815 BB2753 Bordetella bronchiseptica RB50 hypothetical protein NP_889289.1 2919039 R 257310 CDS NP_889290.1 33601730 2661422 complement(2920240..2920725) 1 NC_002927.3 Similar to Ralstonia solanacearum hypothetical protein rsc2017 or rs03585 SWALL:Q8XXU6 (EMBL:AL646067) (134 aa) fasta scores: E(): 0.00069, 33.84% id in 130 aa, and to Arabidopsis thaliana at2g28420/t1b3.6 SWALL:Q941C8 (EMBL:AY052254) (184 aa) fasta scores: E(): 0.013, 31.54% id in 168 aa; dioxygenase 2920725 2661422 BB2754 Bordetella bronchiseptica RB50 dioxygenase NP_889290.1 2920240 R 257310 CDS NP_889291.1 33601731 2661423 2920922..2922127 1 NC_002927.3 Similar to Ralstonia solanacearum substrate-binding periplasmic rsc3342 or rs02578 SWALL:Q8XU51 (EMBL:AL646074) (402 aa) fasta scores: E(): 7.2e-29, 31.13% id in 395 aa, and to Brucella melitensis branched-chain amino acid ABC transporter periplasmic amino acid-binding protein bmeii0344 SWALL:Q8YD33 (EMBL:AE009671) (401 aa) fasta scores: E(): 3.3e-21, 26.75% id in 385 aa; ABC transporter substrate-binding protein 2922127 2661423 BB2755 Bordetella bronchiseptica RB50 ABC transporter substrate-binding protein NP_889291.1 2920922 D 257310 CDS NP_889292.1 33601732 2659569 2922179..2923054 1 NC_002927.3 Similar to Rhizobium meliloti permease ABC transporter protein r02975 or smc03118 SWALL:Q92LQ5 (EMBL:AL591792) (295 aa) fasta scores: E(): 6.5e-47, 50.17% id in 281 aa, and to Agrobacterium tumefaciens ABC transporter membrane spanning protein atu4126 or agr_l_1455 SWALL:Q8U8G6 (EMBL:AE009343) (295 aa) fasta scores: E(): 6.5e-47, 48.44% id in 289 aa; permease of ABC transporter protein 2923054 2659569 BB2756 Bordetella bronchiseptica RB50 permease of ABC transporter protein NP_889292.1 2922179 D 257310 CDS NP_889293.1 33601733 2659890 2923066..2924055 1 NC_002927.3 Similar to Agrobacterium tumefaciens ABC transporter membrane spanning protein atu4127 or agr_l_1453 SWALL:Q8U8G5 (EMBL:AE009343) (335 aa) fasta scores: E(): 3.7e-37, 40.82% id in 316 aa, and to Ralstonia solanacearum probable transmembrane ABC transporter protein rsc3340 or rs02575 SWALL:Q8XU53 (EMBL:AL646074) (328 aa) fasta scores: E(): 6e-36, 42.12% id in 311 aa; ABC transporter permease 2924055 2659890 BB2757 Bordetella bronchiseptica RB50 ABC transporter permease NP_889293.1 2923066 D 257310 CDS NP_889294.1 33601734 2660571 2924045..2924797 1 NC_002927.3 Similar to Ralstonia solanacearum probable ATP-binding ABC transporter protein rsc3344 or rs02581 SWALL:Q8XU49 (EMBL:AL646074) (256 aa) fasta scores: E(): 2.5e-35, 46.15% id in 247 aa, and to Deinococcus radiodurans branched-chain amino acid ABC transporter ATP-binding protein dr0283 SWALL:Q9RXM7 (EMBL:AE001889) (290 aa) fasta scores: E(): 4.3e-33, 44.96% id in 258 aa; branched-chain amino acid ABC transporter ATP-binding protein 2924797 2660571 BB2758 Bordetella bronchiseptica RB50 branched-chain amino acid ABC transporter ATP-binding protein NP_889294.1 2924045 D 257310 CDS NP_889295.1 33601735 2661598 2924806..2925510 1 NC_002927.3 Similar to Thermotoga maritima branched chain amino acid ABC transporter ATP-binding protein tm1139 SWALL:Q9X0M3 (EMBL:AE001771) (239 aa) fasta scores: E(): 1.4e-32, 47.05% id in 238 aa, and to Deinococcus radiodurans branched-chain amino acid ABC transporter ATP-binding protein dr1034 SWALL:Q9RVJ4 (EMBL:AE001955) (252 aa) fasta scores: E(): 5.8e-32, 46.12% id in 232 aa; branched-chain amino acid ABC transporter ATP-binding protein 2925510 2661598 BB2759 Bordetella bronchiseptica RB50 branched-chain amino acid ABC transporter ATP-binding protein NP_889295.1 2924806 D 257310 CDS NP_889296.1 33601736 2659932 2925667..2926257 1 NC_002927.3 Similar to Thermotoga maritima transcriptional regulator, TetR family tm1030 SWALL:Q9X0C0 (EMBL:AE001764) (200 aa) fasta scores: E(): 0.032, 22.88% id in 201 aa, and to Clostridium acetobutylicum transcriptional regulator, AcRR family cac3271 SWALL:Q97E45 (EMBL:AE007822) (205 aa) fasta scores: E(): 0.0027, 20.94% id in 191 aa; TetR family transcriptional regulator 2926257 2659932 BB2760 Bordetella bronchiseptica RB50 TetR family transcriptional regulator NP_889296.1 2925667 D 257310 CDS NP_889297.1 33601737 2660187 complement(2926271..2927098) 1 NC_002927.3 transcriptional regulatory protein 2927098 2660187 BB2761 Bordetella bronchiseptica RB50 transcriptional regulatory protein NP_889297.1 2926271 R 257310 CDS NP_889298.1 33601738 2659272 complement(2927250..2928476) 1 NC_002927.3 hypothetical protein 2928476 2659272 BB2762 Bordetella bronchiseptica RB50 hypothetical protein NP_889298.1 2927250 R 257310 CDS NP_889299.1 33601739 2659649 complement(2928514..2929656) 1 NC_002927.3 thiolase 2929656 2659649 BB2763 Bordetella bronchiseptica RB50 thiolase NP_889299.1 2928514 R 257310 CDS NP_889300.1 33601740 2659747 complement(2929676..2930095) 1 NC_002927.3 hypothetical protein 2930095 2659747 BB2764 Bordetella bronchiseptica RB50 hypothetical protein NP_889300.1 2929676 R 257310 CDS NP_889301.1 33601741 2659189 complement(2930175..2931191) 1 NC_002927.3 hypothetical protein 2931191 2659189 BB2765 Bordetella bronchiseptica RB50 hypothetical protein NP_889301.1 2930175 R 257310 CDS NP_889302.1 33601742 2659190 complement(2931336..2932274) 1 NC_002927.3 short chain dehydrogenase 2932274 2659190 BB2766 Bordetella bronchiseptica RB50 short chain dehydrogenase NP_889302.1 2931336 R 257310 CDS NP_889303.1 33601743 2660365 complement(2932365..2933246) 1 NC_002927.3 LysR family transcriptional regulator 2933246 2660365 BB2767 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_889303.1 2932365 R 257310 CDS NP_889304.1 33601744 2659340 2933408..2934379 1 NC_002927.3 hypothetical protein 2934379 2659340 BB2768 Bordetella bronchiseptica RB50 hypothetical protein NP_889304.1 2933408 D 257310 CDS NP_889305.1 33601745 2659084 2934376..2935623 1 NC_002927.3 hypothetical protein 2935623 2659084 BB2769 Bordetella bronchiseptica RB50 hypothetical protein NP_889305.1 2934376 D 257310 CDS NP_889306.1 33601746 2662732 2935620..2936378 1 NC_002927.3 carnitinyl-CoA dehydratase 2936378 caiD 2662732 caiD Bordetella bronchiseptica RB50 carnitinyl-CoA dehydratase NP_889306.1 2935620 D 257310 CDS NP_889307.1 33601747 2662763 2936407..2937207 1 NC_002927.3 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 2937207 paaG 2662763 paaG Bordetella bronchiseptica RB50 enoyl-CoA hydratase NP_889307.1 2936407 D 257310 CDS NP_889308.1 33601748 2662764 2937238..2938212 1 NC_002927.3 hypothetical protein 2938212 2662764 BB2772 Bordetella bronchiseptica RB50 hypothetical protein NP_889308.1 2937238 D 257310 CDS NP_889309.1 33601749 2662945 2938223..2940307 1 NC_002927.3 enoyl-CoA hydratase 2940307 2662945 BB2773 Bordetella bronchiseptica RB50 enoyl-CoA hydratase NP_889309.1 2938223 D 257310 CDS NP_889310.1 33601750 2662984 2940304..2941488 1 NC_002927.3 ketoacyl CoA thiolase 2941488 2662984 BB2774 Bordetella bronchiseptica RB50 ketoacyl CoA thiolase NP_889310.1 2940304 D 257310 CDS NP_889311.1 33601751 2663021 2941485..2942639 1 NC_002927.3 alcohol dehydrogenase 2942639 2663021 BB2775 Bordetella bronchiseptica RB50 alcohol dehydrogenase NP_889311.1 2941485 D 257310 CDS NP_889312.1 33601752 2663122 2942636..2943103 1 NC_002927.3 4-hydroxybenzoyl-CoA thioesterase 2943103 2663122 BB2776 Bordetella bronchiseptica RB50 4-hydroxybenzoyl-CoA thioesterase NP_889312.1 2942636 D 257310 CDS NP_889313.1 33601753 2663268 complement(2943134..2944345) 1 NC_002927.3 catalyzes the oxidative deamination of D-amino acids; D-amino acid dehydrogenase small subunit 2944345 dadA3 2663268 dadA3 Bordetella bronchiseptica RB50 D-amino acid dehydrogenase small subunit NP_889313.1 2943134 R 257310 CDS NP_889314.1 33601754 2663269 complement(2944689..2945894) 1 NC_002927.3 monooxygenase 2945894 2663269 BB2778 Bordetella bronchiseptica RB50 monooxygenase NP_889314.1 2944689 R 257310 CDS NP_889315.1 33601755 2663344 complement(2945934..2946929) 1 NC_002927.3 hypothetical protein 2946929 2663344 BB2779 Bordetella bronchiseptica RB50 hypothetical protein NP_889315.1 2945934 R 257310 CDS NP_889316.1 33601756 2663350 2947087..2947989 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1679; LysR family transcriptional regulator 2947989 2663350 BB2780 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_889316.1 2947087 D 257310 CDS NP_889317.1 33601757 2663358 complement(2947986..2948708) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1680; NADPH-dependent FMN reductase 2948708 arsH 2663358 arsH Bordetella bronchiseptica RB50 NADPH-dependent FMN reductase NP_889317.1 2947986 R 257310 CDS NP_889318.1 33601758 2663394 complement(2948701..2949144) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1681; arsenate reductase 2949144 arsC 2663394 arsC Bordetella bronchiseptica RB50 arsenate reductase NP_889318.1 2948701 R 257310 CDS NP_889319.1 33601759 2663489 complement(2949147..2950334) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1682; hypothetical protein 2950334 2663489 BB2783 Bordetella bronchiseptica RB50 hypothetical protein NP_889319.1 2949147 R 257310 CDS NP_889320.1 33601760 2663490 complement(2950338..2950718) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1683; transcriptional regulator 2950718 2663490 BB2784 Bordetella bronchiseptica RB50 transcriptional regulator NP_889320.1 2950338 R 257310 CDS NP_889321.1 33601761 2663493 2950936..2952675 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1684; hypothetical protein 2952675 2663493 BB2785 Bordetella bronchiseptica RB50 hypothetical protein NP_889321.1 2950936 D 257310 CDS NP_889322.1 33601762 2663494 2952736..2953707 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1685; hypothetical protein 2953707 2663494 BB2786 Bordetella bronchiseptica RB50 hypothetical protein NP_889322.1 2952736 D 257310 CDS NP_889323.1 33601763 2663509 2953721..2954434 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1686; short chain dehydrogenase 2954434 2663509 BB2787 Bordetella bronchiseptica RB50 short chain dehydrogenase NP_889323.1 2953721 D 257310 CDS NP_889324.1 33601764 2663519 complement(2954439..2955356) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1687; LysR family transcriptional regulator 2955356 2663519 BB2788 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_889324.1 2954439 R 257310 CDS NP_889325.1 33601765 2663565 2955463..2955759 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1688; hypothetical protein 2955759 2663565 BB2789 Bordetella bronchiseptica RB50 hypothetical protein NP_889325.1 2955463 D 257310 CDS NP_889326.1 33601766 2663566 complement(2955920..2956867) 1 NC_002927.3 hypothetical protein 2956867 2663566 BB2790 Bordetella bronchiseptica RB50 hypothetical protein NP_889326.1 2955920 R 257310 CDS NP_889327.1 33601767 2663590 2957088..2958251 1 NC_002927.3 Similar to Alcaligenes eutrophus maleylacetate reductase I TfdfI or TfdF SWALL:TFF1_ALCEU (SWALL:P27137) (354 aa) fasta scores: E(): 1e-15, 27.71% id in 368 aa, and to Sulfolobus solfataricus maleylacetate reductase ClcE or sso2490 SWALL:Q97VW4 (EMBL:AE006847) (327 aa) fasta scores: E(): 5.2e-18, 28.74% id in 334 aa; iron-containing alcohol dehydrogenase 2958251 2663590 BB2791 Bordetella bronchiseptica RB50 iron-containing alcohol dehydrogenase NP_889327.1 2957088 D 257310 CDS NP_889328.1 33601768 2663722 2958311..2959852 1 NC_002927.3 hypothetical protein 2959852 2663722 BB2792 Bordetella bronchiseptica RB50 hypothetical protein NP_889328.1 2958311 D 257310 CDS NP_889329.1 33601769 2663747 2959894..2960655 1 NC_002927.3 hypothetical protein 2960655 2663747 BB2793 Bordetella bronchiseptica RB50 hypothetical protein NP_889329.1 2959894 D 257310 CDS NP_889330.1 33601770 2660580 complement(2960665..2961285) 1 NC_002927.3 Similar to Rhizobium meliloti hypothetical protein rb0633 rb0633 or smb21054 SWALL:Q92VR6 (EMBL:AL603644) (205 aa) fasta scores: E(): 1.1e-07, 28.23% id in 209 aa; hypothetical protein 2961285 2660580 BB2794 Bordetella bronchiseptica RB50 hypothetical protein NP_889330.1 2960665 R 257310 CDS NP_889331.1 33601771 2660581 complement(2961440..2962192) 1 NC_002927.3 Similar to Salmonella typhi ABC-transport ATP-binding protein sty2159 SWALL:Q8Z5T0 (EMBL:AL627272) (250 aa) fasta scores: E(): 3.1e-43, 56.62% id in 249 aa, and to Streptomyces coelicolor ATP-binding protein atrc or sco5258 or 2sc7g11.20C SWALL:Q9F3K7 (EMBL:AL391763) (253 aa) fasta scores: E(): 6.7e-43, 55.6% id in 250 aa; ABC transporter ATP-binding protein 2962192 2660581 BB2795 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_889331.1 2961440 R 257310 CDS NP_889332.1 33601772 2660885 complement(2962218..2962871) 1 NC_002927.3 Similar to Escherichia coli O157:H7 transport system permease YecS or z3006 or ecs2656 SWALL:Q8XBC8 (EMBL:AE005414) (222 aa) fasta scores: E(): 1.6e-23, 40.27% id in 221 aa, and to Listeria innocua hypothetical protein Lin1851 lin1851 SWALL:Q92AR8 (EMBL:AL596170) (213 aa) fasta scores: E(): 7.1e-40, 50.23% id in 215 aa; ABC transporter permease 2962871 2660885 BB2796 Bordetella bronchiseptica RB50 ABC transporter permease NP_889332.1 2962218 R 257310 CDS NP_889333.1 33601773 2660093 complement(2962966..2963757) 1 NC_002927.3 Similar to Clostridium perfringens probable amino acid ABC transporter cpe1324 SWALL:Q8XKS0 (EMBL:AP003190) (262 aa) fasta scores: E(): 2.5e-36, 41.79% id in 268 aa, and to Streptococcus pneumoniae R6 ABC transporter substrate-binding protein-glutamine transport glnH SWALL:AAL00157 (EMBL:AE008505) (278 aa) fasta scores: E(): 8.9e-29, 34.81% id in 270 aa; amino acid ABC transporter substrate-binding protein 2963757 2660093 BB2797 Bordetella bronchiseptica RB50 amino acid ABC transporter substrate-binding protein NP_889333.1 2962966 R 257310 CDS NP_889334.1 33601774 2661818 2964055..2964213 1 NC_002927.3 Similar to Paracoccus pantotrophus NapE protein napE SWALL:NAPE_PARPN (SWALL:Q56348) (59 aa) fasta scores: E(): 1.7e-05, 43.75% id in 48 aa, and to Pseudomonas sp. G-179 NapE napE SWALL:Q9Z3W7 (EMBL:AF083948) (71 aa) fasta scores: E(): 2.9e-05, 50% id in 42 aa; nitrate reductase NapE 2964213 napE 2661818 napE Bordetella bronchiseptica RB50 nitrate reductase NapE NP_889334.1 2964055 D 257310 CDS NP_889335.1 33601775 2661819 2964213..2964548 1 NC_002927.3 Similar to Rhodobacter sphaeroides f. sp. denitrificans NapD precursor SWALL:O88156 (EMBL:AF069545) (88 aa) fasta scores: E(): 0.0007, 33.33% id in 84 aa, and to Agrobacterium tumefaciens periplasmic nitrate reductase, napd protein napd or atu4407 or agr_l_919 SWALL:Q8U7P2 (EMBL:AE009369) (95 aa) fasta scores: E(): 0.00016, 30.33% id in 89 aa; nitrate reductase NapD 2964548 napD 2661819 napD Bordetella bronchiseptica RB50 nitrate reductase NapD NP_889335.1 2964213 D 257310 CDS NP_889336.1 33601776 2661370 2964538..2967027 1 NC_002927.3 periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC; nitrate reductase NapA 2967027 napA 2661370 napA Bordetella bronchiseptica RB50 nitrate reductase NapA NP_889336.1 2964538 D 257310 CDS NP_889337.1 33601777 2661854 2967047..2967523 1 NC_002927.3 diheme cytochrome C precursor 2967523 napB 2661854 napB Bordetella bronchiseptica RB50 diheme cytochrome C precursor NP_889337.1 2967047 D 257310 CDS NP_889338.1 33601778 2661102 2967531..2968193 1 NC_002927.3 cytochrome C-type protein 2968193 napC 2661102 napC Bordetella bronchiseptica RB50 cytochrome C-type protein NP_889338.1 2967531 D 257310 CDS NP_889339.1 33601779 2660050 2968180..2968854 1 NC_002927.3 heme export protein 2968854 ccmA 2660050 ccmA Bordetella bronchiseptica RB50 heme export protein NP_889339.1 2968180 D 257310 CDS NP_889340.1 33601780 2662767 2968910..2969485 1 NC_002927.3 Heme exporter protein B 2969485 ccmB 2662767 ccmB Bordetella bronchiseptica RB50 Heme exporter protein B NP_889340.1 2968910 D 257310 CDS NP_889341.1 33601781 2662675 2969493..2970278 1 NC_002927.3 heme export protein 2970278 ccmC 2662675 ccmC Bordetella bronchiseptica RB50 heme export protein NP_889341.1 2969493 D 257310 CDS NP_889342.1 33601782 2660595 2970275..2970427 1 NC_002927.3 hypothetical protein 2970427 2660595 BB2806 Bordetella bronchiseptica RB50 hypothetical protein NP_889342.1 2970275 D 257310 CDS NP_889343.1 33601783 2660596 2970414..2970875 1 NC_002927.3 CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane; cytochrome C biogenesis protein CcmE 2970875 ccmE 2660596 ccmE Bordetella bronchiseptica RB50 cytochrome C biogenesis protein CcmE NP_889343.1 2970414 D 257310 CDS NP_889344.1 33601784 2660750 2970872..2972866 1 NC_002927.3 cytochrome C-type biogenesis protein 2972866 ccmF 2660750 ccmF Bordetella bronchiseptica RB50 cytochrome C-type biogenesis protein NP_889344.1 2970872 D 257310 CDS NP_889345.1 33601785 2659699 2972866..2973387 1 NC_002927.3 cytochrome C-type biogenesis protein 2973387 ccmG 2659699 ccmG Bordetella bronchiseptica RB50 cytochrome C-type biogenesis protein NP_889345.1 2972866 D 257310 CDS NP_889346.1 33601786 2660824 2973384..2973806 1 NC_002927.3 cytochrome C-type biogenesis protein 2973806 ccmH 2660824 ccmH Bordetella bronchiseptica RB50 cytochrome C-type biogenesis protein NP_889346.1 2973384 D 257310 CDS NP_889347.1 33601787 2660898 2973803..2975032 1 NC_002927.3 cytochrome C-type biogenesis protein 2975032 cycH 2660898 cycH Bordetella bronchiseptica RB50 cytochrome C-type biogenesis protein NP_889347.1 2973803 D 257310 CDS NP_889348.1 33601788 2659660 2975111..2975524 1 NC_002927.3 hypothetical protein 2975524 2659660 BB2812 Bordetella bronchiseptica RB50 hypothetical protein NP_889348.1 2975111 D 257310 CDS NP_889349.1 33601789 2659661 2975638..2976060 1 NC_002927.3 hypothetical protein 2976060 2659661 BB2813 Bordetella bronchiseptica RB50 hypothetical protein NP_889349.1 2975638 D 257310 CDS NP_889350.1 33601790 2659659 complement(2976221..2977138) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1360; ketopantoate reductase 2977138 2659659 BB2814 Bordetella bronchiseptica RB50 ketopantoate reductase NP_889350.1 2976221 R 257310 CDS NP_889351.1 33601791 2659988 complement(2977149..2978327) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1359; mandelate racemase 2978327 2659988 BB2815 Bordetella bronchiseptica RB50 mandelate racemase NP_889351.1 2977149 R 257310 CDS NP_889352.1 33601792 2660840 complement(2978347..2979342) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1358; hypothetical protein 2979342 2660840 BB2816 Bordetella bronchiseptica RB50 hypothetical protein NP_889352.1 2978347 R 257310 CDS NP_889353.1 33601793 2660841 2979512..2980939 1 NC_002927.3 dehydratase, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 2980939 leuC 2660841 leuC Bordetella bronchiseptica RB50 isopropylmalate isomerase large subunit NP_889353.1 2979512 D 257310 CDS NP_889354.1 33601794 2662101 2980941..2981549 1 NC_002927.3 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit 2981549 leuD 2662101 leuD Bordetella bronchiseptica RB50 isopropylmalate isomerase small subunit NP_889354.1 2980941 D 257310 CDS NP_889355.1 33601795 2662102 2981537..2982577 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1355; LacI family transcriptional regulator 2982577 2662102 BB2819 Bordetella bronchiseptica RB50 LacI family transcriptional regulator NP_889355.1 2981537 D 257310 CDS NP_889356.1 33601796 2663956 complement(2982595..2983557) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1354; hypothetical protein 2983557 2663956 BB2820 Bordetella bronchiseptica RB50 hypothetical protein NP_889356.1 2982595 R 257310 CDS NP_889357.1 33601797 2660303 complement(2983554..2984747) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1353; hypothetical protein 2984747 2660303 BB2821 Bordetella bronchiseptica RB50 hypothetical protein NP_889357.1 2983554 R 257310 CDS NP_889358.1 33601798 2660862 complement(2984744..2985541) 1 NC_002927.3 Catalyzes the first step in the citric acid cycle. Oxaloacetate and acetyl-CoA bind to citrate synthase, which then catalyzes the reaction which joins the two compounds together; citrate synthase 2985541 2660862 BB2822 Bordetella bronchiseptica RB50 citrate synthase NP_889358.1 2984744 R 257310 CDS NP_889359.1 33601799 2660863 complement(2985567..2986553) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1351; hypothetical protein 2986553 2660863 BB2823 Bordetella bronchiseptica RB50 hypothetical protein NP_889359.1 2985567 R 257310 CDS NP_889360.1 33601800 2662119 complement(2986572..2988611) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1350; acetyl-CoA synthetase 2988611 2662119 BB2824 Bordetella bronchiseptica RB50 acetyl-CoA synthetase NP_889360.1 2986572 R 257310 CDS NP_889361.1 33601801 2661206 2988813..2989493 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1349; GntR family transcriptional regulator 2989493 2661206 BB2825 Bordetella bronchiseptica RB50 GntR family transcriptional regulator NP_889361.1 2988813 D 257310 CDS NP_889362.1 33601802 2661223 complement(2989507..2990418) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1348; citrate lyase subunit beta 2990418 citE 2661223 citE Bordetella bronchiseptica RB50 citrate lyase subunit beta NP_889362.1 2989507 R 257310 CDS NP_889363.1 33601803 2661224 complement(2990415..2990993) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1347; reductase 2990993 2661224 BB2827 Bordetella bronchiseptica RB50 reductase NP_889363.1 2990415 R 257310 CDS NP_889364.1 33601804 2661225 2991132..2992037 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1346; LysR family transcriptional regulator 2992037 2661225 BB2828 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_889364.1 2991132 D 257310 CDS NP_889365.1 33601805 2659076 2992045..2995464 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1345; hypothetical protein 2995464 2659076 BB2829 Bordetella bronchiseptica RB50 hypothetical protein NP_889365.1 2992045 D 257310 CDS NP_889366.1 33601806 2658996 complement(2995452..2998001) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1344; autotransporter 2998001 2658996 BB2830 Bordetella bronchiseptica RB50 autotransporter NP_889366.1 2995452 R 257310 CDS NP_889367.1 33601807 2659057 complement(2998214..2999014) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1343; iron utilization protein 2999014 mxcB 2659057 mxcB Bordetella bronchiseptica RB50 iron utilization protein NP_889367.1 2998214 R 257310 CDS NP_889368.1 33601808 2659058 complement(2999040..2999672) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1342; hypothetical protein 2999672 2659058 BB2832 Bordetella bronchiseptica RB50 hypothetical protein NP_889368.1 2999040 R 257310 CDS NP_889369.1 33601809 2662442 complement(2999780..2999992) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1341; hypothetical protein 2999992 2662442 BB2833 Bordetella bronchiseptica RB50 hypothetical protein NP_889369.1 2999780 R 257310 CDS NP_889370.1 33601810 2662443 3000086..3000844 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1340; hypothetical protein 3000844 2662443 BB2834 Bordetella bronchiseptica RB50 hypothetical protein NP_889370.1 3000086 D 257310 CDS NP_889371.1 33601811 2660892 3000841..3002043 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1339; cardiolipin synthase 2 3002043 2660892 BB2835 Bordetella bronchiseptica RB50 cardiolipin synthase 2 NP_889371.1 3000841 D 257310 CDS NP_889372.1 33601812 2661405 3002040..3002987 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1338; hypothetical protein 3002987 2661405 BB2836 Bordetella bronchiseptica RB50 hypothetical protein NP_889372.1 3002040 D 257310 CDS NP_889373.1 33601813 2662833 3003041..3004186 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1335; hypothetical protein 3004186 2662833 BB2837 Bordetella bronchiseptica RB50 hypothetical protein NP_889373.1 3003041 D 257310 CDS NP_889374.1 33601814 2662834 3004206..3004928 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1334; hypothetical protein 3004928 2662834 BB2838 Bordetella bronchiseptica RB50 hypothetical protein NP_889374.1 3004206 D 257310 CDS NP_889375.1 33601815 2662835 3005045..3005224 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1333; hypothetical protein 3005224 2662835 BB2839 Bordetella bronchiseptica RB50 hypothetical protein NP_889375.1 3005045 D 257310 CDS NP_889376.1 33601816 2662879 3005221..3006246 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1332A; hypothetical protein 3006246 2662879 BB2840 Bordetella bronchiseptica RB50 hypothetical protein NP_889376.1 3005221 D 257310 CDS NP_889377.1 33601817 2662880 complement(3006232..3006531) 1 NC_002927.3 hypothetical protein 3006531 2662880 BB2841 Bordetella bronchiseptica RB50 hypothetical protein NP_889377.1 3006232 R 257310 CDS NP_889378.1 33601818 2662881 3006622..3006954 1 NC_002927.3 hypothetical protein 3006954 2662881 BB2842 Bordetella bronchiseptica RB50 hypothetical protein NP_889378.1 3006622 D 257310 CDS NP_889379.1 33601819 2662882 3007015..3007338 1 NC_002927.3 hypothetical protein 3007338 2662882 BB2843 Bordetella bronchiseptica RB50 hypothetical protein NP_889379.1 3007015 D 257310 CDS NP_889380.1 33601820 2662929 3007388..3008314 1 NC_002927.3 hypothetical protein 3008314 2662929 BB2844 Bordetella bronchiseptica RB50 hypothetical protein NP_889380.1 3007388 D 257310 CDS NP_889381.1 33601821 2662930 3008333..3010795 1 NC_002927.3 catalyzes the ATP dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA; ATP-dependent DNA ligase 3010795 ligD 2662930 ligD Bordetella bronchiseptica RB50 ATP-dependent DNA ligase NP_889381.1 3008333 D 257310 CDS NP_889382.1 33601822 2662981 3010866..3011873 1 NC_002927.3 short chain dehydrogenase 3011873 2662981 BB2846 Bordetella bronchiseptica RB50 short chain dehydrogenase NP_889382.1 3010866 D 257310 CDS NP_889383.1 33601823 2663190 complement(3011878..3012351) 1 NC_002927.3 hypothetical protein 3012351 2663190 BB2847 Bordetella bronchiseptica RB50 hypothetical protein NP_889383.1 3011878 R 257310 CDS NP_889384.1 33601824 2663191 complement(3012483..3013142) 1 NC_002927.3 hypothetical protein 3013142 2663191 BB2848 Bordetella bronchiseptica RB50 hypothetical protein NP_889384.1 3012483 R 257310 CDS NP_889385.1 33601825 2663208 complement(3013139..3013879) 1 NC_002927.3 hypothetical protein 3013879 2663208 BB2849 Bordetella bronchiseptica RB50 hypothetical protein NP_889385.1 3013139 R 257310 CDS NP_889386.1 33601826 2663209 3013963..3014382 1 NC_002927.3 hypothetical protein 3014382 2663209 BB2850 Bordetella bronchiseptica RB50 hypothetical protein NP_889386.1 3013963 D 257310 CDS NP_889387.1 33601827 2663210 3014434..3014922 1 NC_002927.3 hypothetical protein 3014922 2663210 BB2851 Bordetella bronchiseptica RB50 hypothetical protein NP_889387.1 3014434 D 257310 CDS NP_889388.1 33601828 2663245 complement(3014973..3015416) 1 NC_002927.3 hypothetical protein 3015416 2663245 BB2852 Bordetella bronchiseptica RB50 hypothetical protein NP_889388.1 3014973 R 257310 CDS NP_889389.1 33601829 2663246 complement(3015431..3016174) 1 NC_002927.3 hypothetical protein 3016174 2663246 BB2853 Bordetella bronchiseptica RB50 hypothetical protein NP_889389.1 3015431 R 257310 CDS NP_889390.1 33601830 2663247 complement(3016363..3016707) 1 NC_002927.3 hypothetical protein 3016707 2663247 BB2854 Bordetella bronchiseptica RB50 hypothetical protein NP_889390.1 3016363 R 257310 CDS NP_889391.1 33601831 2663363 complement(3016813..3017046) 1 NC_002927.3 hypothetical protein 3017046 2663363 BB2855 Bordetella bronchiseptica RB50 hypothetical protein NP_889391.1 3016813 R 257310 CDS NP_889392.1 33601832 2663364 complement(3017095..3018861) 1 NC_002927.3 catalyzes the formation of acetate from pyruvate; thiamine pyrophosphate protein 3018861 2663364 BB2856 Bordetella bronchiseptica RB50 thiamine pyrophosphate protein NP_889392.1 3017095 R 257310 CDS NP_889393.1 33601833 2663414 complement(3018937..3020325) 1 NC_002927.3 transcriptional regulatory protein 3020325 zraR 2663414 zraR Bordetella bronchiseptica RB50 transcriptional regulatory protein NP_889393.1 3018937 R 257310 CDS NP_889394.1 33601834 2663547 3020645..3021583 1 NC_002927.3 transcriptional regulatory protein 3021583 2663547 BB2858 Bordetella bronchiseptica RB50 transcriptional regulatory protein NP_889394.1 3020645 D 257310 CDS NP_889395.1 33601835 2663663 3021666..3023114 1 NC_002927.3 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 3023114 rpoN 2663663 rpoN Bordetella bronchiseptica RB50 RNA polymerase factor sigma-54 NP_889395.1 3021666 D 257310 CDS NP_889396.1 33601836 2663692 complement(3023143..3023559) 1 NC_002927.3 hypothetical protein 3023559 2663692 BB2860 Bordetella bronchiseptica RB50 hypothetical protein NP_889396.1 3023143 R 257310 CDS NP_889397.1 33601837 2663693 3023817..3025349 1 NC_002927.3 catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose; glycogen synthase 3025349 glgA 2663693 glgA Bordetella bronchiseptica RB50 glycogen synthase NP_889397.1 3023817 D 257310 CDS NP_889398.1 33601838 2663715 3025361..3028549 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1330; alpha-amylase 3028549 2663715 BB2862 Bordetella bronchiseptica RB50 alpha-amylase NP_889398.1 3025361 D 257310 CDS NP_889399.1 33601839 2663760 3028561..3031902 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1329; alpha-glucosidase 3031902 2663760 BB2863 Bordetella bronchiseptica RB50 alpha-glucosidase NP_889399.1 3028561 D 257310 CDS NP_889400.1 33601840 2659811 3031899..3034094 1 NC_002927.3 catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching protein 3034094 glgB 2659811 glgB Bordetella bronchiseptica RB50 glycogen branching protein NP_889400.1 3031899 D 257310 CDS NP_889401.1 33601841 2661379 3034099..3036219 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1327; glycosyl hydrolase 3036219 glgX 2661379 glgX Bordetella bronchiseptica RB50 glycosyl hydrolase NP_889401.1 3034099 D 257310 CDS NP_889402.1 33601842 2661363 3036216..3037970 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1326; alpha-amylase 3037970 2661363 BB2866 Bordetella bronchiseptica RB50 alpha-amylase NP_889402.1 3036216 D 257310 CDS NP_889403.1 33601843 2661341 3037967..3039985 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1324; 4-alpha-glucanotransferase 3039985 malQ 2661341 malQ Bordetella bronchiseptica RB50 4-alpha-glucanotransferase NP_889403.1 3037967 D 257310 CDS NP_889404.1 33601844 2659833 3039982..3042525 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1323; alpha-amylase 3042525 2659833 BB2868 Bordetella bronchiseptica RB50 alpha-amylase NP_889404.1 3039982 D 257310 CDS NP_889405.1 33601845 2660674 complement(3042516..3045488) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1322; two-component sensor histidine kinase 3045488 2660674 BB2869 Bordetella bronchiseptica RB50 two-component sensor histidine kinase NP_889405.1 3042516 R 257310 CDS NP_889406.1 33601846 2661752 complement(3045589..3046443) 1 NC_002927.3 catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal; pyridoxal kinase 3046443 pdxK 2661752 pdxK Bordetella bronchiseptica RB50 pyridoxal kinase NP_889406.1 3045589 R 257310 CDS NP_889407.1 33601847 2661753 complement(3046440..3047255) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1320; hypothetical protein 3047255 2661753 BB2871 Bordetella bronchiseptica RB50 hypothetical protein NP_889407.1 3046440 R 257310 CDS NP_889408.1 33601848 2660085 3047315..3048646 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1319; GntR family transcriptional regulator 3048646 2660085 BB2872 Bordetella bronchiseptica RB50 GntR family transcriptional regulator NP_889408.1 3047315 D 257310 CDS NP_889409.1 33601849 2659234 3048685..3049191 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1318; hypothetical protein 3049191 2659234 BB2873 Bordetella bronchiseptica RB50 hypothetical protein NP_889409.1 3048685 D 257310 CDS NP_889410.1 33601850 2659235 3049232..3049786 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1316; hypothetical protein 3049786 2659235 BB2874 Bordetella bronchiseptica RB50 hypothetical protein NP_889410.1 3049232 D 257310 CDS NP_889411.1 33601851 2660109 3049858..3050283 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1315; universal stress family protein 3050283 2660109 BB2875 Bordetella bronchiseptica RB50 universal stress family protein NP_889411.1 3049858 D 257310 CDS NP_889412.1 33601852 2660233 3050316..3051203 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1314; hypothetical protein 3051203 2660233 BB2876 Bordetella bronchiseptica RB50 hypothetical protein NP_889412.1 3050316 D 257310 CDS NP_889413.1 33601853 2660234 complement(3051206..3051529) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1313; hypothetical protein 3051529 2660234 BB2877 Bordetella bronchiseptica RB50 hypothetical protein NP_889413.1 3051206 R 257310 CDS NP_889414.1 33601854 2659313 complement(3051526..3052563) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1312; metalloprotease 3052563 2659313 BB2878 Bordetella bronchiseptica RB50 metalloprotease NP_889414.1 3051526 R 257310 CDS NP_889415.1 33601855 2661295 3052768..3053172 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1311; hypothetical protein 3053172 2661295 BB2879 Bordetella bronchiseptica RB50 hypothetical protein NP_889415.1 3052768 D 257310 CDS NP_889416.1 33601856 2659672 3053354..3054583 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1310; hypothetical protein 3054583 2659672 BB2880 Bordetella bronchiseptica RB50 hypothetical protein NP_889416.1 3053354 D 257310 CDS NP_889417.1 33601857 2659673 3054676..3055215 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1307; bacterioferritin comigratory protein 3055215 2659673 BB2881 Bordetella bronchiseptica RB50 bacterioferritin comigratory protein NP_889417.1 3054676 D 257310 CDS NP_889418.1 33601858 2661669 complement(3055322..3055666) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1306; arsenate reductase 3055666 arsC 2661669 arsC Bordetella bronchiseptica RB50 arsenate reductase NP_889418.1 3055322 R 257310 CDS NP_889419.1 33601859 2663935 complement(3055724..3057172) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1305; hypothetical protein 3057172 2663935 BB2883 Bordetella bronchiseptica RB50 hypothetical protein NP_889419.1 3055724 R 257310 CDS NP_889420.1 33601860 2663936 complement(3057360..3057695) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1304; hypothetical protein 3057695 2663936 BB2884 Bordetella bronchiseptica RB50 hypothetical protein NP_889420.1 3057360 R 257310 CDS NP_889421.1 33601861 2660304 3057871..3059463 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1303; hypothetical protein 3059463 2660304 BB2885 Bordetella bronchiseptica RB50 hypothetical protein NP_889421.1 3057871 D 257310 CDS NP_889422.1 33601862 2660305 3059487..3060665 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1302; hypothetical protein 3060665 2660305 BB2886 Bordetella bronchiseptica RB50 hypothetical protein NP_889422.1 3059487 D 257310 CDS NP_889423.1 33601863 2660306 3060748..3061248 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1301; glutathione peroxidase 3061248 2660306 BB2887 Bordetella bronchiseptica RB50 glutathione peroxidase NP_889423.1 3060748 D 257310 CDS NP_889424.1 33601864 2660929 3061274..3062059 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1300; glutathione transferase 3062059 2660929 BB2888 Bordetella bronchiseptica RB50 glutathione transferase NP_889424.1 3061274 D 257310 CDS NP_889425.1 33601865 2660926 3062071..3062535 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1299; acetyltransferase 3062535 2660926 BB2889 Bordetella bronchiseptica RB50 acetyltransferase NP_889425.1 3062071 D 257310 CDS NP_889426.1 33601866 2660923 3062532..3062825 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1298; hypothetical protein 3062825 2660923 BB2890 Bordetella bronchiseptica RB50 hypothetical protein NP_889426.1 3062532 D 257310 CDS NP_889427.1 33601867 2660924 3062822..3063598 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1297; lipoate-protein ligase A 3063598 2660924 BB2891 Bordetella bronchiseptica RB50 lipoate-protein ligase A NP_889427.1 3062822 D 257310 CDS NP_889428.1 33601868 2660919 3063627..3064454 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1296; lipoprotein 3064454 2660919 BB2892 Bordetella bronchiseptica RB50 lipoprotein NP_889428.1 3063627 D 257310 CDS NP_889429.1 33601869 2660847 3064580..3065050 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1295; hypothetical protein 3065050 2660847 BB2893 Bordetella bronchiseptica RB50 hypothetical protein NP_889429.1 3064580 D 257310 CDS NP_889430.1 33601870 2660848 3065177..3066070 1 NC_002927.3 catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine; phosphatidylserine decarboxylase 3066070 psd 2660848 psd Bordetella bronchiseptica RB50 phosphatidylserine decarboxylase NP_889430.1 3065177 D 257310 CDS NP_889431.1 33601871 2660849 3066155..3067363 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1293; L-lactate dehydrogenase 3067363 lldD 2660849 lldD Bordetella bronchiseptica RB50 L-lactate dehydrogenase NP_889431.1 3066155 D 257310 CDS NP_889432.1 33601872 2660801 complement(3067376..3068191) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1292; hypothetical protein 3068191 2660801 BB2896 Bordetella bronchiseptica RB50 hypothetical protein NP_889432.1 3067376 R 257310 CDS NP_889433.1 33601873 2660744 complement(3068325..3068846) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1291; hypothetical protein 3068846 2660744 BB2897 Bordetella bronchiseptica RB50 hypothetical protein NP_889433.1 3068325 R 257310 CDS NP_889434.1 33601874 2660745 complement(3068843..3069340) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1290; hypothetical protein 3069340 2660745 BB2898 Bordetella bronchiseptica RB50 hypothetical protein NP_889434.1 3068843 R 257310 CDS NP_889435.1 33601875 2660741 3069488..3069865 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1289; hypothetical protein 3069865 2660741 BB2899 Bordetella bronchiseptica RB50 hypothetical protein NP_889435.1 3069488 D 257310 CDS NP_889436.1 33601876 2660742 3069862..3070746 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1288+BP1269; hypothetical protein 3070746 2660742 BB2900 Bordetella bronchiseptica RB50 hypothetical protein NP_889436.1 3069862 D 257310 CDS NP_889437.1 33601877 2660601 complement(3070759..3071397) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1270; glutathione S-transferase 3071397 2660601 BB2901 Bordetella bronchiseptica RB50 glutathione S-transferase NP_889437.1 3070759 R 257310 CDS NP_889438.1 33601878 2660602 complement(3071394..3072566) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1271; hypothetical protein 3072566 2660602 BB2902 Bordetella bronchiseptica RB50 hypothetical protein NP_889438.1 3071394 R 257310 CDS NP_889439.1 33601879 2660451 3072691..3073305 1 NC_002927.3 glutathione S-transferase 3073305 gst 2660451 gst Bordetella bronchiseptica RB50 glutathione S-transferase NP_889439.1 3072691 D 257310 CDS NP_889440.1 33601880 2661609 3073422..3074165 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1272; aspartate racemase 3074165 2661609 BB2904 Bordetella bronchiseptica RB50 aspartate racemase NP_889440.1 3073422 D 257310 CDS NP_889441.1 33601881 2661603 complement(3074283..3074984) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1273; high-affinity branched-chain amino acid transport ATP-binding protein 3074984 livF 2661603 livF Bordetella bronchiseptica RB50 high-affinity branched-chain amino acid transport ATP-binding protein NP_889441.1 3074283 R 257310 CDS NP_889442.1 33601882 2661550 complement(3074985..3075752) 1 NC_002927.3 Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; leucine/isoleucine/valine transporter ATP-binding protein 3075752 livG 2661550 livG Bordetella bronchiseptica RB50 leucine/isoleucine/valine transporter ATP-binding protein NP_889442.1 3074985 R 257310 CDS NP_889443.1 33601883 2661506 complement(3075749..3076987) 1 NC_002927.3 Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; leucine/isoleucine/valine transporter permease subunit 3076987 livM 2661506 livM Bordetella bronchiseptica RB50 leucine/isoleucine/valine transporter permease subunit NP_889443.1 3075749 R 257310 CDS NP_889444.1 33601884 2663405 complement(3076987..3077913) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1276; high-affinity branched-chain amino acid transport system permease 3077913 livH 2663405 livH Bordetella bronchiseptica RB50 high-affinity branched-chain amino acid transport system permease NP_889444.1 3076987 R 257310 CDS NP_889445.1 33601885 2663889 complement(3078016..3079131) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1277; leu/Ile/val-binding protein precursor 3079131 livJ 2663889 livJ Bordetella bronchiseptica RB50 leu/Ile/val-binding protein precursor NP_889445.1 3078016 R 257310 CDS NP_889446.1 33601886 2660089 complement(3079402..3079983) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1279; hypothetical protein 3079983 2660089 BB2910 Bordetella bronchiseptica RB50 hypothetical protein NP_889446.1 3079402 R 257310 CDS NP_889447.1 33601887 2663932 complement(3079980..3080813) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1280; pyrroline-5-carboxylate reductase 3080813 proC 2663932 proC Bordetella bronchiseptica RB50 pyrroline-5-carboxylate reductase NP_889447.1 3079980 R 257310 CDS NP_889448.1 33601888 2663933 3081024..3082337 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1281; glycerol-3-phosphate ABC transporter substrate-binding protein 3082337 ugpB 2663933 ugpB Bordetella bronchiseptica RB50 glycerol-3-phosphate ABC transporter substrate-binding protein NP_889448.1 3081024 D 257310 CDS NP_889449.1 33601889 2659354 3082514..3083395 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1282; sn-glycerol-3-phosphate ABC transporter permease 3083395 ugpA 2659354 ugpA Bordetella bronchiseptica RB50 sn-glycerol-3-phosphate ABC transporter permease NP_889449.1 3082514 D 257310 CDS NP_889450.1 33601890 2661957 3083415..3084266 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1283; sn-glycerol-3-phosphate ABC transporter permease 3084266 ugpE 2661957 ugpE Bordetella bronchiseptica RB50 sn-glycerol-3-phosphate ABC transporter permease NP_889450.1 3083415 D 257310 CDS NP_889451.1 33601891 2661948 3084319..3085407 1 NC_002927.3 part of the UgpABCE glycerol-3-phosphate uptake system; glycerol-3-phosphate transporter ATP-binding protein 3085407 ugpC 2661948 ugpC Bordetella bronchiseptica RB50 glycerol-3-phosphate transporter ATP-binding protein NP_889451.1 3084319 D 257310 CDS NP_889452.1 33601892 2663902 complement(3085563..3086690) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1285; leu/Ile/val-binding protein precursor 3086690 livJ 2663902 livJ Bordetella bronchiseptica RB50 leu/Ile/val-binding protein precursor NP_889452.1 3085563 R 257310 CDS NP_889453.1 33601893 2663903 3086925..3087536 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1286; hypothetical protein 3087536 2663903 BB2917 Bordetella bronchiseptica RB50 hypothetical protein NP_889453.1 3086925 D 257310 CDS NP_889454.1 33601894 2663912 3088087..3095670 1 NC_002927.3 type I polyketide synthase 3095670 wcbR 2663912 wcbR Bordetella bronchiseptica RB50 type I polyketide synthase NP_889454.1 3088087 D 257310 CDS NP_889455.1 33601895 2659156 3095667..3097019 1 NC_002927.3 polyketide synthase 3097019 wcbT 2659156 wcbT Bordetella bronchiseptica RB50 polyketide synthase NP_889455.1 3095667 D 257310 CDS NP_889456.1 33601896 2659157 complement(3097016..3098572) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1654; capsular polysaccharide biosynthesis protein 3098572 wcbQ 2659157 wcbQ Bordetella bronchiseptica RB50 capsular polysaccharide biosynthesis protein NP_889456.1 3097016 R 257310 CDS NP_889457.1 33601897 2661329 complement(3098565..3099338) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1655; oxidoreductase 3099338 wcbP 2661329 wcbP Bordetella bronchiseptica RB50 oxidoreductase NP_889457.1 3098565 R 257310 CDS NP_889458.1 33601898 2661500 complement(3099335..3100555) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1632; capsular polysaccharide export protein 3100555 wcbO 2661500 wcbO Bordetella bronchiseptica RB50 capsular polysaccharide export protein NP_889458.1 3099335 R 257310 CDS NP_889459.1 33601899 2661501 complement(3100569..3102626) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1631; capsular polysaccharide export protein 3102626 wcbA 2661501 wcbA Bordetella bronchiseptica RB50 capsular polysaccharide export protein NP_889459.1 3100569 R 257310 CDS NP_889460.1 33601900 2659688 complement(3102623..3103648) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1630; capsular polysaccharide biosynthesis protein 3103648 wbpP 2659688 wbpP Bordetella bronchiseptica RB50 capsular polysaccharide biosynthesis protein NP_889460.1 3102623 R 257310 CDS NP_889461.1 33601901 2659689 complement(3103662..3104951) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1629; capsular polysaccharide biosynthesis protein 3104951 wbpO 2659689 wbpO Bordetella bronchiseptica RB50 capsular polysaccharide biosynthesis protein NP_889461.1 3103662 R 257310 CDS NP_889462.1 33601902 2662620 complement(3104974..3106071) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1628; capsular polysaccharide export protein 3106071 wza 2662620 wza Bordetella bronchiseptica RB50 capsular polysaccharide export protein NP_889462.1 3104974 R 257310 CDS NP_889463.1 33601903 2660288 complement(3106068..3106958) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1627; capsular polysaccharide biosynthesis protein 3106958 vipC 2660288 vipC Bordetella bronchiseptica RB50 capsular polysaccharide biosynthesis protein NP_889463.1 3106068 R 257310 CDS NP_889464.1 33601904 2660289 complement(3106955..3109039) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1626; capsular polysaccharide biosynthesis protein 3109039 wbpT 2660289 wbpT Bordetella bronchiseptica RB50 capsular polysaccharide biosynthesis protein NP_889464.1 3106955 R 257310 CDS NP_889465.1 33601905 2660290 complement(3109071..3110240) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1625; capsule polysaccharide export inner-membrane protein 3110240 wcbD 2660290 wcbD Bordetella bronchiseptica RB50 capsule polysaccharide export inner-membrane protein NP_889465.1 3109071 R 257310 CDS NP_889466.1 33601906 2660933 complement(3110282..3111019) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1624; polysialic acid transport ATP-binding protein 3111019 kpsT 2660933 kpsT Bordetella bronchiseptica RB50 polysialic acid transport ATP-binding protein NP_889466.1 3110282 R 257310 CDS NP_889467.1 33601907 2660904 complement(3111016..3111786) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1623; polysialic acid transport protein 3111786 kpsM 2660904 kpsM Bordetella bronchiseptica RB50 polysialic acid transport protein NP_889467.1 3111016 R 257310 CDS NP_889468.1 33601908 2660854 3112111..3113424 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1620; glycosyl transferase 3113424 2660854 BB2932 Bordetella bronchiseptica RB50 glycosyl transferase NP_889468.1 3112111 D 257310 CDS NP_889469.1 33601909 2660836 3113451..3115535 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1619; hypothetical protein 3115535 2660836 BB2933 Bordetella bronchiseptica RB50 hypothetical protein NP_889469.1 3113451 D 257310 CDS NP_889470.1 33601910 2660532 3115673..3117841 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1618+BP1617; capsular polysaccharide biosynthesis protein 3117841 tviD 2660532 tviD Bordetella bronchiseptica RB50 capsular polysaccharide biosynthesis protein NP_889470.1 3115673 D 257310 CDS NP_889471.1 33601911 2660533 complement(3117980..3118480) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1616; DNA-binding protein 3118480 dps 2660533 dps Bordetella bronchiseptica RB50 DNA-binding protein NP_889471.1 3117980 R 257310 CDS NP_889472.1 33601912 2659588 complement(3118579..3120093) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1615; aldehyde dehydrogenase 3120093 2659588 BB2936 Bordetella bronchiseptica RB50 aldehyde dehydrogenase NP_889472.1 3118579 R 257310 CDS NP_889473.1 33601913 2659468 3120231..3121118 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1614; LysR family transcriptional regulator 3121118 2659468 BB2937 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_889473.1 3120231 D 257310 CDS NP_889474.1 33601914 2659412 complement(3121133..3122086) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1613; LysR family transcriptional regulator 3122086 2659412 BB2938 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_889474.1 3121133 R 257310 CDS NP_889475.1 33601915 2661555 complement(3122138..3124129) 1 NC_002927.3 catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 3124129 recG 2661555 recG Bordetella bronchiseptica RB50 ATP-dependent DNA helicase RecG NP_889475.1 3122138 R 257310 CDS NP_889476.1 33601916 2661386 complement(3124244..3124630) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1611; translational inhibitor 3124630 2661386 BB2940 Bordetella bronchiseptica RB50 translational inhibitor NP_889476.1 3124244 R 257310 CDS NP_889477.1 33601917 2661387 complement(3124807..3127620) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1610; autotransporter 3127620 2661387 BB2941 Bordetella bronchiseptica RB50 autotransporter NP_889477.1 3124807 R 257310 CDS NP_889478.1 33601918 2659910 complement(3127784..3128587) 1 NC_002927.3 catalyzes the reduction of 2,5-diketo-D-gluconic acid to 2-keto-L-gulonic acid; 2,5-diketo-D-gluconate reductase B 3128587 dkgB 2659910 dkgB Bordetella bronchiseptica RB50 2,5-diketo-D-gluconate reductase B NP_889478.1 3127784 R 257310 CDS NP_889479.1 33601919 2659844 complement(3128659..3129822) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1608; hypothetical protein 3129822 2659844 BB2943 Bordetella bronchiseptica RB50 hypothetical protein NP_889479.1 3128659 R 257310 CDS NP_889480.1 33601920 2661654 3129924..3130826 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1607; LysR family transcriptional regulator 3130826 2661654 BB2944 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_889480.1 3129924 D 257310 CDS NP_889481.1 33601921 2662868 complement(3130891..3131667) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1606; ferredoxin--NADP reductase 3131667 fpr 2662868 fpr Bordetella bronchiseptica RB50 ferredoxin--NADP reductase NP_889481.1 3130891 R 257310 CDS NP_889482.1 33601922 2662909 3131989..3133038 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1605; iron binding protein 3133038 2662909 BB2946 Bordetella bronchiseptica RB50 iron binding protein NP_889482.1 3131989 D 257310 CDS NP_889483.1 33601923 2662910 3133162..3134832 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1604; inner membrane component of binding-protein-dependent transport system 3134832 2662910 BB2947 Bordetella bronchiseptica RB50 inner membrane component of binding-protein-dependent transport system NP_889483.1 3133162 D 257310 CDS NP_889484.1 33601924 2662680 3134837..3135613 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1603; ABC transporter ATP-binding protein 3135613 2662680 BB2948 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_889484.1 3134837 D 257310 CDS NP_889485.1 33601925 2661686 complement(3135633..3136538) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1601; hypothetical protein 3136538 2661686 BB2949 Bordetella bronchiseptica RB50 hypothetical protein NP_889485.1 3135633 R 257310 CDS NP_889486.1 33601926 2661687 complement(3136616..3137314) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1600; hypothetical protein 3137314 2661687 BB2950 Bordetella bronchiseptica RB50 hypothetical protein NP_889486.1 3136616 R 257310 CDS NP_889487.1 33601927 2662544 3137474..3138418 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1599; LysR family transcriptional regulator 3138418 2662544 BB2951 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_889487.1 3137474 D 257310 CDS NP_889488.1 33601928 2662273 complement(3138428..3139918) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1598; nitrogen regulation protein NR(I) 3139918 glnG 2662273 glnG Bordetella bronchiseptica RB50 nitrogen regulation protein NR(I) NP_889488.1 3138428 R 257310 CDS NP_889489.1 33601929 2660204 complement(3139915..3140982) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1597; nitrogen regulation protein NR(II) 3140982 glnL 2660204 glnL Bordetella bronchiseptica RB50 nitrogen regulation protein NR(II) NP_889489.1 3139915 R 257310 CDS NP_889490.1 33601930 2661637 complement(3141046..3142458) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1596; glutamine synthetase 3142458 glnA 2661637 glnA Bordetella bronchiseptica RB50 glutamine synthetase NP_889490.1 3141046 R 257310 CDS NP_889491.1 33601931 2661934 complement(3142644..3143864) 1 NC_002927.3 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 3143864 2661934 BB2955 Bordetella bronchiseptica RB50 coproporphyrinogen III oxidase NP_889491.1 3142644 R 257310 CDS NP_889492.1 33601932 2658991 complement(3143886..3144536) 1 NC_002927.3 HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; deoxyribonucleotide triphosphate pyrophosphatase 3144536 2658991 BB2956 Bordetella bronchiseptica RB50 deoxyribonucleotide triphosphate pyrophosphatase NP_889492.1 3143886 R 257310 CDS NP_889493.1 33601933 2661201 3144654..3146456 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1592; hypothetical protein 3146456 2661201 BB2957 Bordetella bronchiseptica RB50 hypothetical protein NP_889493.1 3144654 D 257310 CDS NP_889494.1 33601934 2659226 complement(3146334..3148073) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1591; methyl-accepting chemotaxis protein 3148073 2659226 BB2958 Bordetella bronchiseptica RB50 methyl-accepting chemotaxis protein NP_889494.1 3146334 R 257310 CDS NP_889495.1 33601935 2659116 complement(3148108..3149013) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1590; transcriptional regulator 3149013 2659116 BB2959 Bordetella bronchiseptica RB50 transcriptional regulator NP_889495.1 3148108 R 257310 CDS NP_889496.1 33601936 2660953 3149196..3150572 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1589; hypothetical protein 3150572 2660953 BB2960 Bordetella bronchiseptica RB50 hypothetical protein NP_889496.1 3149196 D 257310 CDS NP_889497.1 33601937 2660896 complement(3150780..3151520) 1 NC_002927.3 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH 3151520 rph 2660896 rph Bordetella bronchiseptica RB50 ribonuclease PH NP_889497.1 3150780 R 257310 CDS NP_889498.1 33601938 2660876 3151657..3152583 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1587; hypothetical protein 3152583 2660876 BB2962 Bordetella bronchiseptica RB50 hypothetical protein NP_889498.1 3151657 D 257310 CDS NP_889499.1 33601939 2660877 3152854..3153009 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1586; hypothetical protein 3153009 2660877 BB2963 Bordetella bronchiseptica RB50 hypothetical protein NP_889499.1 3152854 D 257310 CDS NP_889500.1 33601940 2660508 3153022..3153150 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1585; hypothetical protein 3153150 2660508 BB2964 Bordetella bronchiseptica RB50 hypothetical protein NP_889500.1 3153022 D 257310 CDS NP_889501.1 33601941 2660509 3153147..3153431 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1584; DNA-binding protein 3153431 2660509 BB2965 Bordetella bronchiseptica RB50 DNA-binding protein NP_889501.1 3153147 D 257310 CDS NP_889502.1 33601942 2660510 complement(3153490..3154980) 1 NC_002927.3 Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile; AMP nucleosidase 3154980 amn 2660510 amn Bordetella bronchiseptica RB50 AMP nucleosidase NP_889502.1 3153490 R 257310 CDS NP_889503.1 33601943 2660443 3155225..3155824 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1582; hypothetical protein 3155824 2660443 BB2967 Bordetella bronchiseptica RB50 hypothetical protein NP_889503.1 3155225 D 257310 CDS NP_889504.1 33601944 2659416 complement(3155829..3156599) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1581; oxidoreductase 3156599 2659416 BB2968 Bordetella bronchiseptica RB50 oxidoreductase NP_889504.1 3155829 R 257310 CDS NP_889505.1 33601945 2661481 3156837..3157550 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1580; cytochrome C 3157550 2661481 BB2969 Bordetella bronchiseptica RB50 cytochrome C NP_889505.1 3156837 D 257310 CDS NP_889506.1 33601946 2659852 3157547..3158464 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1579; cytochrome C 3158464 2659852 BB2970 Bordetella bronchiseptica RB50 cytochrome C NP_889506.1 3157547 D 257310 CDS NP_889507.1 33601947 2659931 3158585..3159232 1 NC_002927.3 Essential for recycling GMP and indirectly, cGMP; guanylate kinase 3159232 gmk 2659931 gmk Bordetella bronchiseptica RB50 guanylate kinase NP_889507.1 3158585 D 257310 CDS NP_889508.1 33601948 2659816 3159274..3159477 1 NC_002927.3 Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega 3159477 rpoZ 2659816 rpoZ Bordetella bronchiseptica RB50 DNA-directed RNA polymerase subunit omega NP_889508.1 3159274 D 257310 CDS NP_889509.1 33601949 2659817 3159502..3161781 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1576; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase 3161781 spoT 2659817 spoT Bordetella bronchiseptica RB50 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase NP_889509.1 3159502 D 257310 CDS NP_889510.1 33601950 2660920 complement(3161794..3162522) 1 NC_002927.3 similar to ATP-binding protein of ABC transporters; glutamine ABC transporter ATP-binding protein 3162522 glnQ 2660920 glnQ Bordetella bronchiseptica RB50 glutamine ABC transporter ATP-binding protein NP_889510.1 3161794 R 257310 CDS NP_889511.1 33601951 2663166 complement(3162519..3163178) 1 NC_002927.3 similar to permease of ABC transporters; mutations impair ability of Escherichia coli to transport and utilize glutamine; glutamine ABC transporter permease 3163178 glnP 2663166 glnP Bordetella bronchiseptica RB50 glutamine ABC transporter permease NP_889511.1 3162519 R 257310 CDS NP_889512.1 33601952 2660866 complement(3163247..3163999) 1 NC_002927.3 similar to periplasmic-binding component of ABC transporters; glutamine ABC transporter substrate-binding protein 3163999 glnH 2660866 glnH Bordetella bronchiseptica RB50 glutamine ABC transporter substrate-binding protein NP_889512.1 3163247 R 257310 CDS NP_889513.1 33601953 2659122 3164187..3165218 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1896; hypothetical protein 3165218 2659122 BB2977 Bordetella bronchiseptica RB50 hypothetical protein NP_889513.1 3164187 D 257310 CDS NP_889514.1 33601954 2659123 complement(3165232..3168855) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1895; 5-oxoprolinase 3168855 oplaH 2659123 oplaH Bordetella bronchiseptica RB50 5-oxoprolinase NP_889514.1 3165232 R 257310 CDS NP_889515.1 33601955 2659164 complement(3168934..3169446) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1894; hypothetical protein 3169446 2659164 BB2979 Bordetella bronchiseptica RB50 hypothetical protein NP_889515.1 3168934 R 257310 CDS NP_889516.1 33601956 2662136 3169590..3170522 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1893; LysR family transcriptional regulator 3170522 2662136 BB2980 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_889516.1 3169590 D 257310 CDS NP_889517.1 33601957 2659617 3170687..3171391 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1892; hypothetical protein 3171391 2659617 BB2981 Bordetella bronchiseptica RB50 hypothetical protein NP_889517.1 3170687 D 257310 CDS NP_889518.1 33601958 2659734 3171412..3172377 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1891; hypothetical protein 3172377 2659734 BB2982 Bordetella bronchiseptica RB50 hypothetical protein NP_889518.1 3171412 D 257310 CDS NP_889519.1 33601959 2659735 3172391..3172882 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1890; hypothetical protein 3172882 2659735 BB2983 Bordetella bronchiseptica RB50 hypothetical protein NP_889519.1 3172391 D 257310 CDS NP_889520.1 33601960 2662161 3172875..3174173 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1888; hypothetical protein 3174173 2662161 BB2984 Bordetella bronchiseptica RB50 hypothetical protein NP_889520.1 3172875 D 257310 CDS NP_889521.1 33601961 2659769 3174326..3175411 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1887; hypothetical protein 3175411 2659769 BB2985 Bordetella bronchiseptica RB50 hypothetical protein NP_889521.1 3174326 D 257310 CDS NP_889522.1 33601962 2659770 3175418..3175918 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1886; hypothetical protein 3175918 2659770 BB2986 Bordetella bronchiseptica RB50 hypothetical protein NP_889522.1 3175418 D 257310 CDS NP_889523.1 33601963 2662198 3175911..3177212 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1885; hypothetical protein 3177212 2662198 BB2987 Bordetella bronchiseptica RB50 hypothetical protein NP_889523.1 3175911 D 257310 CDS NP_889524.1 33601964 2659930 complement(3177238..3178989) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1884; hemolysin activator-like protein 3178989 fhaC 2659930 fhaC Bordetella bronchiseptica RB50 hemolysin activator-like protein NP_889524.1 3177238 R 257310 CDS NP_889525.1 33601965 2659962 complement(3178982..3180079) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1883; fimbrial adhesin 3180079 fimD 2659962 fimD Bordetella bronchiseptica RB50 fimbrial adhesin NP_889525.1 3178982 R 257310 CDS NP_889526.1 33601966 2659981 complement(3180093..3182714) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1882; outer membrane usher protein precursor 3182714 fimC 2659981 fimC Bordetella bronchiseptica RB50 outer membrane usher protein precursor NP_889526.1 3180093 R 257310 CDS NP_889527.1 33601967 2661390 complement(3182777..3183601) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1881; chaperone protein 3183601 fimB 2661390 fimB Bordetella bronchiseptica RB50 chaperone protein NP_889527.1 3182777 R 257310 CDS NP_889528.1 33601968 2660378 complement(3183761..3184366) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1880; fimbrial protein 3184366 fimA 2660378 fimA Bordetella bronchiseptica RB50 fimbrial protein NP_889528.1 3183761 R 257310 CDS NP_889529.1 33601969 2660379 complement(3184702..3195660) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1879; filamentous hemagglutinin/adhesin 3195660 fhaB 2660379 fhaB Bordetella bronchiseptica RB50 filamentous hemagglutinin/adhesin NP_889529.1 3184702 R 257310 CDS NP_889530.1 33601970 2659034 3196207..3196890 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1878; virulence factors transcription regulator 3196890 bvgA 2659034 bvgA Bordetella bronchiseptica RB50 virulence factors transcription regulator NP_889530.1 3196207 D 257310 CDS NP_889531.1 33601971 2659742 3196899..3200615 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1877; virulence sensor protein 3200615 bvgS 2659742 bvgS Bordetella bronchiseptica RB50 virulence sensor protein NP_889531.1 3196899 D 257310 CDS NP_889532.1 33601972 2659976 complement(3200662..3201537) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1876; regulatory protein BvgR 3201537 bvgR 2659976 bvgR Bordetella bronchiseptica RB50 regulatory protein BvgR NP_889532.1 3200662 R 257310 CDS NP_889533.1 33601973 2661426 complement(3201671..3202504) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1875; hypothetical protein 3202504 2661426 BB2997 Bordetella bronchiseptica RB50 hypothetical protein NP_889533.1 3201671 R 257310 CDS NP_889534.1 33601974 2661427 complement(3202523..3203872) 1 NC_002927.3 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase 3203872 2661427 BB2998 Bordetella bronchiseptica RB50 amidase NP_889534.1 3202523 R 257310 CDS NP_889535.1 33601975 2661478 complement(3203933..3204652) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1871; hypothetical protein 3204652 2661478 BB2999 Bordetella bronchiseptica RB50 hypothetical protein NP_889535.1 3203933 R 257310 CDS NP_889536.1 33601976 2661479 complement(3204675..3205958) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1870; hypothetical protein 3205958 2661479 BB3000 Bordetella bronchiseptica RB50 hypothetical protein NP_889536.1 3204675 R 257310 CDS NP_889537.1 33601977 2660941 complement(3205955..3206575) 1 NC_002927.3 hypothetical protein 3206575 2660941 BB3001 Bordetella bronchiseptica RB50 hypothetical protein NP_889537.1 3205955 R 257310 CDS NP_889538.1 33601978 2660942 complement(3206685..3207734) 1 NC_002927.3 transport protein 3207734 2660942 BB3002 Bordetella bronchiseptica RB50 transport protein NP_889538.1 3206685 R 257310 CDS NP_889539.1 33601979 2660390 complement(3208077..3208985) 1 NC_002927.3 LysR family transcriptional regulator 3208985 2660390 BB3003 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_889539.1 3208077 R 257310 CDS NP_889540.1 33601980 2661056 3209089..3210051 1 NC_002927.3 integral membrane protein 3210051 2661056 BB3004 Bordetella bronchiseptica RB50 integral membrane protein NP_889540.1 3209089 D 257310 CDS NP_889541.1 33601981 2659261 complement(3210055..3210768) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1734; ABC transporter ATP-binding protein 3210768 2659261 BB3005 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_889541.1 3210055 R 257310 CDS NP_889542.1 33601982 2661037 3210845..3211393 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1733; acyl-CoA thioesterase 3211393 tesA 2661037 tesA Bordetella bronchiseptica RB50 acyl-CoA thioesterase NP_889542.1 3210845 D 257310 CDS NP_889543.1 33601983 2659221 complement(3211375..3213390) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1732; peptidyl-prolyl cis-trans isomerase D 3213390 ppiD 2659221 ppiD Bordetella bronchiseptica RB50 peptidyl-prolyl cis-trans isomerase D NP_889543.1 3211375 R 257310 CDS NP_889544.1 33601984 2661053 3213573..3214322 1 NC_002927.3 hydrolyzes diesters during transport at the inner face of the cytoplasmic membrane to glycerol-3-phosphate and alcohol; induced when cells are starved for inorganic phosphate; glycerophosphodiester phosphodiesterase 3214322 ugpQ 2661053 ugpQ Bordetella bronchiseptica RB50 glycerophosphodiester phosphodiesterase NP_889544.1 3213573 D 257310 CDS NP_889545.1 33601985 2663773 3214335..3215198 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1730; hypothetical protein 3215198 2663773 BB3009 Bordetella bronchiseptica RB50 hypothetical protein NP_889545.1 3214335 D 257310 CDS NP_889546.1 33601986 2663774 complement(3215202..3216617) 1 NC_002927.3 Catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 3216617 2663774 BB3010 Bordetella bronchiseptica RB50 dihydrolipoamide dehydrogenase NP_889546.1 3215202 R 257310 CDS NP_889547.1 33601987 2663879 complement(3216751..3217479) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1728; glutaredoxin 3217479 2663879 BB3011 Bordetella bronchiseptica RB50 glutaredoxin NP_889547.1 3216751 R 257310 CDS NP_889548.1 33601988 2662642 complement(3217618..3217818) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1727; hypothetical protein 3217818 2662642 BB3012 Bordetella bronchiseptica RB50 hypothetical protein NP_889548.1 3217618 R 257310 CDS NP_889549.1 33601989 2662657 3217994..3218392 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1726; MerR family transcriptional regulator 3218392 2662657 BB3013 Bordetella bronchiseptica RB50 MerR family transcriptional regulator NP_889549.1 3217994 D 257310 CDS NP_889550.1 33601990 2661895 complement(3218416..3219816) 1 NC_002927.3 in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S]; 23S rRNA 5-methyluridine methyltransferase 3219816 rumA 2661895 rumA Bordetella bronchiseptica RB50 23S rRNA 5-methyluridine methyltransferase NP_889550.1 3218416 R 257310 CDS NP_889551.1 33601991 2662165 complement(3219935..3220684) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1724; hypothetical protein 3220684 2662165 BB3015 Bordetella bronchiseptica RB50 hypothetical protein NP_889551.1 3219935 R 257310 CDS NP_889552.1 33601992 2662166 complement(3220973..3221650) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1723; hypothetical protein 3221650 2662166 BB3016 Bordetella bronchiseptica RB50 hypothetical protein NP_889552.1 3220973 R 257310 CDS NP_889553.1 33601993 2661281 complement(3221677..3222456) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1722; hypothetical protein 3222456 2661281 BB3017 Bordetella bronchiseptica RB50 hypothetical protein NP_889553.1 3221677 R 257310 CDS NP_889554.1 33601994 2661282 complement(3222453..3223331) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1721; peptidase 3223331 2661282 BB3018 Bordetella bronchiseptica RB50 peptidase NP_889554.1 3222453 R 257310 CDS NP_889555.1 33601995 2659223 complement(3223349..3224038) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1720; protein-L-isoaspartate O-methyltransferase 3224038 pcm 2659223 pcm Bordetella bronchiseptica RB50 protein-L-isoaspartate O-methyltransferase NP_889555.1 3223349 R 257310 CDS NP_889556.1 33601996 2660385 complement(3224113..3224871) 1 NC_002927.3 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 3224871 surE 2660385 surE Bordetella bronchiseptica RB50 stationary phase survival protein SurE NP_889556.1 3224113 R 257310 CDS NP_889557.1 33601997 2660386 3224997..3225644 1 NC_002927.3 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX; glycerol-3-phosphate acyltransferase PlsY 3225644 2660386 BB3021 Bordetella bronchiseptica RB50 glycerol-3-phosphate acyltransferase PlsY NP_889557.1 3224997 D 257310 CDS NP_889558.1 33601998 2660721 complement(3225689..3226729) 1 NC_002927.3 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease 3226729 gcp 2660721 gcp Bordetella bronchiseptica RB50 DNA-binding/iron metalloprotein/AP endonuclease NP_889558.1 3225689 R 257310 CDS NP_889559.1 33601999 2659599 3226864..3228156 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1715; permease 3228156 2659599 BB3023 Bordetella bronchiseptica RB50 permease NP_889559.1 3226864 D 257310 CDS NP_889560.1 33602000 2661372 3228362..3229387 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1714; hypothetical protein 3229387 2661372 BB3024 Bordetella bronchiseptica RB50 hypothetical protein NP_889560.1 3228362 D 257310 CDS NP_889561.1 33602001 2660932 3229523..3229906 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1713; thioredoxin 2 3229906 trxC 2660932 trxC Bordetella bronchiseptica RB50 thioredoxin 2 NP_889561.1 3229523 D 257310 CDS NP_889562.1 33602002 2659656 complement(3229925..3230512) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1712; hypothetical protein 3230512 2659656 BB3026 Bordetella bronchiseptica RB50 hypothetical protein NP_889562.1 3229925 R 257310 CDS NP_889563.1 33602003 2659686 complement(3230550..3231407) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1710; substrate-binding protein 3231407 2659686 BB3027 Bordetella bronchiseptica RB50 substrate-binding protein NP_889563.1 3230550 R 257310 CDS NP_889564.1 33602004 2659687 complement(3231435..3232208) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1709; permease of ABC transporter 3232208 2659687 BB3028 Bordetella bronchiseptica RB50 permease of ABC transporter NP_889564.1 3231435 R 257310 CDS NP_889565.1 33602005 2663937 complement(3232205..3233203) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1708; hypothetical protein 3233203 2663937 BB3029 Bordetella bronchiseptica RB50 hypothetical protein NP_889565.1 3232205 R 257310 CDS NP_889566.1 33602006 2663938 complement(3233288..3234064) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1707; ABC transporter ATP-binding protein 3234064 2663938 BB3030 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_889566.1 3233288 R 257310 CDS NP_889567.1 33602007 2661936 complement(3234219..3235886) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1706; ABC transporter ATP-binding protein 3235886 2661936 BB3031 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_889567.1 3234219 R 257310 CDS NP_889568.1 33602008 2660612 3236203..3237327 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1705; hypothetical protein 3237327 2660612 BB3032 Bordetella bronchiseptica RB50 hypothetical protein NP_889568.1 3236203 D 257310 CDS NP_889569.1 33602009 2663014 3237454..3238077 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1704; hypothetical protein 3238077 2663014 BB3033 Bordetella bronchiseptica RB50 hypothetical protein NP_889569.1 3237454 D 257310 CDS NP_889570.1 33602010 2663291 3238074..3239975 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1703; hypothetical protein 3239975 2663291 BB3034 Bordetella bronchiseptica RB50 hypothetical protein NP_889570.1 3238074 D 257310 CDS NP_889571.1 33602011 2663292 3240024..3240818 1 NC_002927.3 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 3240818 2663292 BB3035 Bordetella bronchiseptica RB50 enoyl-CoA hydratase NP_889571.1 3240024 D 257310 CDS NP_889572.1 33602012 2663413 complement(3240831..3241832) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1701; muramoyltetrapeptide carboxypeptidase 3241832 ldcA 2663413 ldcA Bordetella bronchiseptica RB50 muramoyltetrapeptide carboxypeptidase NP_889572.1 3240831 R 257310 CDS NP_889573.1 33602013 2663480 complement(3241829..3242335) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1700; zinc-binding hydrolase 3242335 cumB 2663480 cumB Bordetella bronchiseptica RB50 zinc-binding hydrolase NP_889573.1 3241829 R 257310 CDS NP_889574.1 33602014 2662785 complement(3242328..3243176) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1699; hypothetical protein 3243176 2662785 BB3038 Bordetella bronchiseptica RB50 hypothetical protein NP_889574.1 3242328 R 257310 CDS NP_889575.1 33602015 2662786 complement(3243274..3243843) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1698; hypothetical protein 3243843 2662786 BB3039 Bordetella bronchiseptica RB50 hypothetical protein NP_889575.1 3243274 R 257310 CDS NP_889576.1 33602016 2662787 complement(3243944..3244270) 1 NC_002927.3 subunit G of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit G 3244270 phaG 2662787 phaG Bordetella bronchiseptica RB50 monovalent cation/H+ antiporter subunit G NP_889576.1 3243944 R 257310 CDS NP_889577.1 33602017 2661272 complement(3244267..3244551) 1 NC_002927.3 subunit F of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; monovalent cation/H+ antiporter subunit F 3244551 phaF 2661272 phaF Bordetella bronchiseptica RB50 monovalent cation/H+ antiporter subunit F NP_889577.1 3244267 R 257310 CDS NP_889578.1 33602018 2660065 complement(3244548..3245027) 1 NC_002927.3 subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; monovalent cation/H+ antiporter subunit E 3245027 phaE 2660065 phaE Bordetella bronchiseptica RB50 monovalent cation/H+ antiporter subunit E NP_889578.1 3244548 R 257310 CDS NP_889579.1 33602019 2661343 complement(3245024..3246652) 1 NC_002927.3 subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; monovalent cation/H+ antiporter subunit D 3246652 phaD 2661343 phaD Bordetella bronchiseptica RB50 monovalent cation/H+ antiporter subunit D NP_889579.1 3245024 R 257310 CDS NP_889580.1 33602020 2662593 complement(3246649..3246993) 1 NC_002927.3 subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit C 3246993 phaC 2662593 phaC Bordetella bronchiseptica RB50 monovalent cation/H+ antiporter subunit C NP_889580.1 3246649 R 257310 CDS NP_889581.1 33602021 2662634 complement(3246993..3249926) 1 NC_002927.3 subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+; monovalent cation/H+ antiporter subunit A 3249926 phaA 2662634 phaA Bordetella bronchiseptica RB50 monovalent cation/H+ antiporter subunit A NP_889581.1 3246993 R 257310 CDS NP_889582.1 33602022 2661414 3250349..3251332 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1690+BP2631; hypothetical protein 3251332 2661414 BB3046 Bordetella bronchiseptica RB50 hypothetical protein NP_889582.1 3250349 D 257310 CDS NP_889583.1 33602023 2661539 complement(3251380..3254025) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2632; GTP-binding protein 3254025 2661539 BB3047 Bordetella bronchiseptica RB50 GTP-binding protein NP_889583.1 3251380 R 257310 CDS NP_889584.1 33602024 2659467 complement(3254022..3255143) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2633; exonuclease 3255143 2659467 BB3048 Bordetella bronchiseptica RB50 exonuclease NP_889584.1 3254022 R 257310 CDS NP_889585.1 33602025 2661184 complement(3255220..3256524) 1 NC_002927.3 catalyzes the oxidative deamination of D-amino acids; D-amino acid dehydrogenase small subunit 3256524 dadA 2661184 dadA Bordetella bronchiseptica RB50 D-amino acid dehydrogenase small subunit NP_889585.1 3255220 R 257310 CDS NP_889586.1 33602026 2661185 3256660..3257127 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2635; leucine-responsive regulatory protein 3257127 lrp 2661185 lrp Bordetella bronchiseptica RB50 leucine-responsive regulatory protein NP_889586.1 3256660 D 257310 CDS NP_889587.1 33602027 2662188 3257199..3257912 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2636; hypothetical protein 3257912 2662188 BB3051 Bordetella bronchiseptica RB50 hypothetical protein NP_889587.1 3257199 D 257310 CDS NP_889588.1 33602028 2661188 3258041..3259186 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2637; lipoprotein 3259186 2661188 BB3052 Bordetella bronchiseptica RB50 lipoprotein NP_889588.1 3258041 D 257310 CDS NP_889589.1 33602029 2661189 complement(3259188..3260918) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2638; hypothetical protein 3260918 2661189 BB3053 Bordetella bronchiseptica RB50 hypothetical protein NP_889589.1 3259188 R 257310 CDS NP_889590.1 33602030 2662026 complement(3261036..3261344) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2639; integral membrane protein 3261344 2662026 BB3054 Bordetella bronchiseptica RB50 integral membrane protein NP_889590.1 3261036 R 257310 CDS NP_889591.1 33602031 2662113 complement(3261357..3262169) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2640; ABC transporter 3262169 2662113 BB3055 Bordetella bronchiseptica RB50 ABC transporter NP_889591.1 3261357 R 257310 CDS NP_889592.1 33602032 2661515 complement(3262162..3263052) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2641; ABC transporter 3263052 2661515 BB3056 Bordetella bronchiseptica RB50 ABC transporter NP_889592.1 3262162 R 257310 CDS NP_889593.1 33602033 2659906 complement(3263049..3264137) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2642; ABC transporter ATP-binding protein 3264137 2659906 BB3057 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_889593.1 3263049 R 257310 CDS NP_889594.1 33602034 2661440 complement(3264137..3265219) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2642A; ABC transporter ATP-binding protein 3265219 2661440 BB3058 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_889594.1 3264137 R 257310 CDS NP_889595.1 33602035 2661525 3265324..3266133 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2643; glycerol-3-phosphate regulon repressor protein 3266133 glpR 2661525 glpR Bordetella bronchiseptica RB50 glycerol-3-phosphate regulon repressor protein NP_889595.1 3265324 D 257310 CDS NP_889596.1 33602036 2659417 3266173..3267777 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2644; glycerol-3-phosphate dehydrogenase 3267777 2659417 BB3060 Bordetella bronchiseptica RB50 glycerol-3-phosphate dehydrogenase NP_889596.1 3266173 D 257310 CDS NP_889597.1 33602037 2659507 3267858..3268598 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2645; IclR family transcriptional regulator 3268598 2659507 BB3061 Bordetella bronchiseptica RB50 IclR family transcriptional regulator NP_889597.1 3267858 D 257310 CDS NP_889598.1 33602038 2660353 complement(3268606..3269475) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2646; oxidoreductase 3269475 2660353 BB3062 Bordetella bronchiseptica RB50 oxidoreductase NP_889598.1 3268606 R 257310 CDS NP_889599.1 33602039 2659262 complement(3269472..3270491) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2647; hypothetical protein 3270491 2659262 BB3063 Bordetella bronchiseptica RB50 hypothetical protein NP_889599.1 3269472 R 257310 CDS NP_889600.1 33602040 2659263 complement(3270488..3271870) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2648; hypothetical protein 3271870 2659263 BB3064 Bordetella bronchiseptica RB50 hypothetical protein NP_889600.1 3270488 R 257310 CDS NP_889601.1 33602041 2659264 complement(3271903..3272763) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2649; hypothetical protein 3272763 2659264 BB3065 Bordetella bronchiseptica RB50 hypothetical protein NP_889601.1 3271903 R 257310 CDS NP_889602.1 33602042 2662816 complement(3273013..3273705) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2650; hypothetical protein 3273705 2662816 BB3066 Bordetella bronchiseptica RB50 hypothetical protein NP_889602.1 3273013 R 257310 CDS NP_889603.1 33602043 2662817 3273787..3274668 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2651; hypothetical protein 3274668 2662817 BB3067 Bordetella bronchiseptica RB50 hypothetical protein NP_889603.1 3273787 D 257310 CDS NP_889604.1 33602044 2662844 3274727..3275164 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2652; hypothetical protein 3275164 2662844 BB3068 Bordetella bronchiseptica RB50 hypothetical protein NP_889604.1 3274727 D 257310 CDS NP_889605.1 33602045 2662845 complement(3275255..3276226) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2653; hypothetical protein 3276226 2662845 BB3069 Bordetella bronchiseptica RB50 hypothetical protein NP_889605.1 3275255 R 257310 CDS NP_889606.1 33602046 2662884 complement(3276265..3277209) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2654; dihydrodipicolinate synthase 3277209 2662884 BB3070 Bordetella bronchiseptica RB50 dihydrodipicolinate synthase NP_889606.1 3276265 R 257310 CDS NP_889607.1 33602047 2662895 3277428..3278114 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2655; IclR family transcriptional regulator 3278114 2662895 BB3071 Bordetella bronchiseptica RB50 IclR family transcriptional regulator NP_889607.1 3277428 D 257310 CDS NP_889608.1 33602048 2662896 complement(3278294..3278689) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2656; hypothetical protein 3278689 2662896 BB3072 Bordetella bronchiseptica RB50 hypothetical protein NP_889608.1 3278294 R 257310 CDS NP_889609.1 33602049 2662935 complement(3278775..3279467) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2657; integral membrane protein 3279467 2662935 BB3073 Bordetella bronchiseptica RB50 integral membrane protein NP_889609.1 3278775 R 257310 CDS NP_889610.1 33602050 2662970 complement(3279460..3279876) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2658; peptidyl-tRNA hydrolase domain-containing protein 3279876 2662970 BB3074 Bordetella bronchiseptica RB50 peptidyl-tRNA hydrolase domain-containing protein NP_889610.1 3279460 R 257310 CDS NP_889611.1 33602051 2663038 3279987..3280619 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2659; hypothetical protein 3280619 2663038 BB3075 Bordetella bronchiseptica RB50 hypothetical protein NP_889611.1 3279987 D 257310 CDS NP_889612.1 33602052 2663039 3280648..3281091 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2660; hypothetical protein 3281091 2663039 BB3076 Bordetella bronchiseptica RB50 hypothetical protein NP_889612.1 3280648 D 257310 CDS NP_889613.1 33602053 2663040 complement(3281113..3282204) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2661; hypothetical protein 3282204 2663040 BB3077 Bordetella bronchiseptica RB50 hypothetical protein NP_889613.1 3281113 R 257310 CDS NP_889614.1 33602054 2663052 complement(3282259..3283050) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2662; class II aldolase/adducin domain-containing protein 3283050 2663052 BB3078 Bordetella bronchiseptica RB50 class II aldolase/adducin domain-containing protein NP_889614.1 3282259 R 257310 CDS NP_889615.1 33602055 2663072 3283195..3283815 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2663; transcriptional regulatory protein 3283815 2663072 BB3079 Bordetella bronchiseptica RB50 transcriptional regulatory protein NP_889615.1 3283195 D 257310 CDS NP_889616.1 33602056 2663127 3284064..3284537 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2664; MarR family transcriptional regulator 3284537 2663127 BB3080 Bordetella bronchiseptica RB50 MarR family transcriptional regulator NP_889616.1 3284064 D 257310 CDS NP_889617.1 33602057 2663137 3284534..3286579 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2665; hypothetical protein 3286579 2663137 BB3081 Bordetella bronchiseptica RB50 hypothetical protein NP_889617.1 3284534 D 257310 CDS NP_889618.1 33602058 2663138 3286576..3286788 1 NC_002927.3 hypothetical protein 3286788 2663138 BB3082 Bordetella bronchiseptica RB50 hypothetical protein NP_889618.1 3286576 D 257310 CDS NP_889619.1 33602059 2663223 3286793..3287686 1 NC_002927.3 hemolysin D 3287686 2663223 BB3083 Bordetella bronchiseptica RB50 hemolysin D NP_889619.1 3286793 D 257310 CDS NP_889620.1 33602060 2663219 3287714..3289135 1 NC_002927.3 outer membrane efflux protein 3289135 2663219 BB3084 Bordetella bronchiseptica RB50 outer membrane efflux protein NP_889620.1 3287714 D 257310 CDS NP_889621.1 33602061 2663260 complement(3289142..3289846) 1 NC_002927.3 Displays esterase activity toward palmitoyl-CoA and pNP-butyrate; esterase YpfH 3289846 2663260 BB3085 Bordetella bronchiseptica RB50 esterase YpfH NP_889621.1 3289142 R 257310 CDS NP_889622.1 33602062 2663261 3289957..3290664 1 NC_002927.3 hypothetical protein 3290664 2663261 BB3086 Bordetella bronchiseptica RB50 hypothetical protein NP_889622.1 3289957 D 257310 CDS NP_889623.1 33602063 2663262 3290681..3292066 1 NC_002927.3 hypothetical protein 3292066 2663262 BB3087 Bordetella bronchiseptica RB50 hypothetical protein NP_889623.1 3290681 D 257310 CDS NP_889624.1 33602064 2663274 3292075..3295233 1 NC_002927.3 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis. It is not the major replicative DNA polymerase.; error-prone DNA polymerase 3295233 dnaE2 2663274 dnaE2 Bordetella bronchiseptica RB50 error-prone DNA polymerase NP_889624.1 3292075 D 257310 CDS NP_889625.1 33602065 2663287 complement(3295299..3296588) 1 NC_002927.3 catalyzes the oxidative deamination of D-amino acids; D-amino acid dehydrogenase small subunit 3296588 2663287 BB3089 Bordetella bronchiseptica RB50 D-amino acid dehydrogenase small subunit NP_889625.1 3295299 R 257310 CDS NP_889626.1 33602066 2663308 complement(3296707..3297177) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2211; DNA-binding protein 3297177 2663308 BB3090 Bordetella bronchiseptica RB50 DNA-binding protein NP_889626.1 3296707 R 257310 CDS NP_889627.1 33602067 2663316 complement(3297188..3298396) 1 NC_002927.3 flavohemoprotein; catalyzes the formation of nitrate from nitric oxide; can also catalyze the reduction of dihydropteridine; nitric oxide dioxygenase 3298396 fhp 2663316 fhp Bordetella bronchiseptica RB50 nitric oxide dioxygenase NP_889627.1 3297188 R 257310 CDS NP_889628.1 33602068 2663323 3298543..3299007 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2213; hypothetical protein 3299007 2663323 BB3092 Bordetella bronchiseptica RB50 hypothetical protein NP_889628.1 3298543 D 257310 CDS NP_889629.1 33602069 2663326 complement(3299031..3300116) 1 NC_002927.3 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV 3300116 dinP 2663326 dinP Bordetella bronchiseptica RB50 DNA polymerase IV NP_889629.1 3299031 R 257310 CDS NP_889630.1 33602070 2663327 3300214..3300624 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0908; hypothetical protein 3300624 2663327 BB3094 Bordetella bronchiseptica RB50 hypothetical protein NP_889630.1 3300214 D 257310 CDS NP_889631.1 33602071 2663536 complement(3300627..3301079) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0907; lipoprotein 3301079 2663536 BB3095 Bordetella bronchiseptica RB50 lipoprotein NP_889631.1 3300627 R 257310 CDS NP_889632.1 33602072 2663561 3301239..3303152 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0906; peptidase 3303152 2663561 BB3096 Bordetella bronchiseptica RB50 peptidase NP_889632.1 3301239 D 257310 CDS NP_889633.1 33602073 2663562 3303288..3305900 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0905; penicillin-binding protein 1A 3305900 mrcA 2663562 mrcA Bordetella bronchiseptica RB50 penicillin-binding protein 1A NP_889633.1 3303288 D 257310 CDS NP_889634.1 33602074 2663575 complement(3305902..3306636) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0904; serine/threonine protein phosphatase 1 3306636 pphA 2663575 pphA Bordetella bronchiseptica RB50 serine/threonine protein phosphatase 1 NP_889634.1 3305902 R 257310 CDS NP_889635.1 33602075 2663593 3306800..3307981 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0903; hypothetical protein 3307981 2663593 BB3099 Bordetella bronchiseptica RB50 hypothetical protein NP_889635.1 3306800 D 257310 CDS NP_889636.1 33602076 2663614 3307978..3308190 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0902; hypothetical protein 3308190 2663614 BB3100 Bordetella bronchiseptica RB50 hypothetical protein NP_889636.1 3307978 D 257310 CDS NP_889637.1 33602077 2663615 complement(3308187..3309167) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0901; oxidoreductase 3309167 2663615 BB3101 Bordetella bronchiseptica RB50 oxidoreductase NP_889637.1 3308187 R 257310 CDS NP_889638.1 33602078 2663624 complement(3309213..3310130) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0900; oxidoreductase 3310130 2663624 BB3102 Bordetella bronchiseptica RB50 oxidoreductase NP_889638.1 3309213 R 257310 CDS NP_889639.1 33602079 2663635 3310238..3312004 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0899; ABC transporter ATP-binding protein 3312004 2663635 BB3103 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_889639.1 3310238 D 257310 CDS NP_889640.1 33602080 2663657 3312059..3312442 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0898; ferredoxin 3312442 2663657 BB3104 Bordetella bronchiseptica RB50 ferredoxin NP_889640.1 3312059 D 257310 CDS NP_889641.1 33602081 2663679 complement(3312452..3312703) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0896; hypothetical protein 3312703 2663679 BB3105 Bordetella bronchiseptica RB50 hypothetical protein NP_889641.1 3312452 R 257310 CDS NP_889642.1 33602082 2663680 complement(3312897..3313112) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0895; hypothetical protein 3313112 2663680 BB3106 Bordetella bronchiseptica RB50 hypothetical protein NP_889642.1 3312897 R 257310 CDS NP_889643.1 33602083 2663681 complement(3313209..3314327) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0894; mannose-6-phosphate isomerase 3314327 pmi 2663681 pmi Bordetella bronchiseptica RB50 mannose-6-phosphate isomerase NP_889643.1 3313209 R 257310 CDS NP_889644.1 33602084 2663689 complement(3314447..3314659) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0893; hypothetical protein 3314659 2663689 BB3108 Bordetella bronchiseptica RB50 hypothetical protein NP_889644.1 3314447 R 257310 CDS NP_889645.1 33602085 2663690 complement(3314819..3315040) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0892; hypothetical protein 3315040 2663690 BB3109 Bordetella bronchiseptica RB50 hypothetical protein NP_889645.1 3314819 R 257310 CDS NP_889646.1 33602086 2663691 complement(3315334..3317646) 1 NC_002927.3 autotransporter 3317646 2663691 BB3110 Bordetella bronchiseptica RB50 autotransporter NP_889646.1 3315334 R 257310 CDS NP_889647.1 33602087 2663729 complement(3317747..3319333) 1 NC_002927.3 autotransporter 3319333 2663729 BB3111 Bordetella bronchiseptica RB50 autotransporter NP_889647.1 3317747 R 257310 CDS NP_889648.1 33602088 2663730 3320136..3320441 1 NC_002927.3 hypothetical protein 3320441 2663730 BB3112 Bordetella bronchiseptica RB50 hypothetical protein NP_889648.1 3320136 D 257310 CDS NP_889649.1 33602089 2663778 complement(3320454..3321425) 1 NC_002927.3 hypothetical protein 3321425 2663778 BB3113 Bordetella bronchiseptica RB50 hypothetical protein NP_889649.1 3320454 R 257310 CDS NP_889650.1 33602090 2663779 complement(3321493..3322920) 1 NC_002927.3 hypothetical protein 3322920 2663779 BB3114 Bordetella bronchiseptica RB50 hypothetical protein NP_889650.1 3321493 R 257310 CDS NP_889651.1 33602091 2659096 complement(3323269..3324927) 1 NC_002927.3 methyl-accepting chemotaxis protein 3324927 2659096 BB3115 Bordetella bronchiseptica RB50 methyl-accepting chemotaxis protein NP_889651.1 3323269 R 257310 CDS NP_889652.1 33602092 2661280 complement(3325087..3326661) 1 NC_002927.3 hypothetical protein 3326661 2661280 BB3116 Bordetella bronchiseptica RB50 hypothetical protein NP_889652.1 3325087 R 257310 CDS NP_889653.1 33602093 2661569 3327048..3327389 1 NC_002927.3 protein secretion chaperone 3327389 csaA 2661569 csaA Bordetella bronchiseptica RB50 protein secretion chaperone NP_889653.1 3327048 D 257310 CDS NP_889654.1 33602094 2661570 3327591..3327869 1 NC_002927.3 hypothetical protein 3327869 2661570 BB3118 Bordetella bronchiseptica RB50 hypothetical protein NP_889654.1 3327591 D 257310 CDS NP_889655.1 33602095 2661571 3328104..3328547 1 NC_002927.3 hypothetical protein 3328547 2661571 BB3119 Bordetella bronchiseptica RB50 hypothetical protein NP_889655.1 3328104 D 257310 CDS NP_889656.1 33602096 2660444 3328703..3330277 1 NC_002927.3 lysine-specific permease 3330277 lysP 2660444 lysP Bordetella bronchiseptica RB50 lysine-specific permease NP_889656.1 3328703 D 257310 CDS NP_889657.1 33602097 2660979 complement(3330317..3331048) 1 NC_002927.3 hypothetical protein 3331048 2660979 BB3121 Bordetella bronchiseptica RB50 hypothetical protein NP_889657.1 3330317 R 257310 CDS NP_889658.1 33602098 2660772 3331301..3331525 1 NC_002927.3 hypothetical protein 3331525 2660772 BB3122 Bordetella bronchiseptica RB50 hypothetical protein NP_889658.1 3331301 D 257310 CDS NP_889659.1 33602099 2660052 complement(3331547..3332545) 1 NC_002927.3 hypothetical protein 3332545 2660052 BB3123 Bordetella bronchiseptica RB50 hypothetical protein NP_889659.1 3331547 R 257310 CDS NP_889660.1 33602100 2660053 complement(3332558..3333484) 1 NC_002927.3 hydroxymethylglutaryl-CoA lyase 3333484 hmgL 2660053 hmgL Bordetella bronchiseptica RB50 hydroxymethylglutaryl-CoA lyase NP_889660.1 3332558 R 257310 CDS NP_889661.1 33602101 2659722 complement(3333489..3334685) 1 NC_002927.3 hypothetical protein 3334685 2659722 BB3125 Bordetella bronchiseptica RB50 hypothetical protein NP_889661.1 3333489 R 257310 CDS NP_889662.1 33602102 2659723 3334857..3336785 1 NC_002927.3 propionate catabolism operon regulatory protein 3336785 prpR 2659723 prpR Bordetella bronchiseptica RB50 propionate catabolism operon regulatory protein NP_889662.1 3334857 D 257310 CDS NP_889663.1 33602103 2661320 3336909..3337610 1 NC_002927.3 protein involved in resistance to different drugs (tetracycline, chloramphenicol, beta-lactams, and quinolones); part of the multiple antibiotic resistance (mar) locus, which is composed by the genes marC and marRAB; unknown function; multiple drug resistance protein MarC 3337610 marC 2661320 marC Bordetella bronchiseptica RB50 multiple drug resistance protein MarC NP_889663.1 3336909 D 257310 CDS NP_889664.1 33602104 2661612 complement(3337799..3339370) 1 NC_002927.3 hypothetical protein 3339370 2661612 BB3128 Bordetella bronchiseptica RB50 hypothetical protein NP_889664.1 3337799 R 257310 CDS NP_889665.1 33602105 2661494 3339763..3339897 1 NC_002927.3 hypothetical protein 3339897 2661494 BB3129 Bordetella bronchiseptica RB50 hypothetical protein NP_889665.1 3339763 D 257310 CDS NP_889666.1 33602106 2659763 3340058..3340270 1 NC_002927.3 hypothetical protein 3340270 2659763 BB3130 Bordetella bronchiseptica RB50 hypothetical protein NP_889666.1 3340058 D 257310 CDS NP_889667.1 33602107 2659764 complement(3340317..3341480) 1 NC_002927.3 acyl-CoA dehydrogenase 3341480 2659764 BB3131 Bordetella bronchiseptica RB50 acyl-CoA dehydrogenase NP_889667.1 3340317 R 257310 CDS NP_889668.1 33602108 2661418 complement(3341517..3342686) 1 NC_002927.3 hypothetical protein 3342686 2661418 BB3132 Bordetella bronchiseptica RB50 hypothetical protein NP_889668.1 3341517 R 257310 CDS NP_889669.1 33602109 2660778 complement(3342683..3344116) 1 NC_002927.3 succinate-semialdehyde dehydrogenase 3344116 gabD 2660778 gabD Bordetella bronchiseptica RB50 succinate-semialdehyde dehydrogenase NP_889669.1 3342683 R 257310 CDS NP_889670.1 33602110 2659537 complement(3344127..3345809) 1 NC_002927.3 hypothetical protein 3345809 ilvB 2659537 ilvB Bordetella bronchiseptica RB50 hypothetical protein NP_889670.1 3344127 R 257310 CDS NP_889671.1 33602111 2659756 complement(3345822..3346796) 1 NC_002927.3 hypothetical protein 3346796 2659756 BB3135 Bordetella bronchiseptica RB50 hypothetical protein NP_889671.1 3345822 R 257310 CDS NP_889672.1 33602112 2659757 complement(3347157..3348122) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2103; hypothetical protein 3348122 2659757 BB3136 Bordetella bronchiseptica RB50 hypothetical protein NP_889672.1 3347157 R 257310 CDS NP_889673.1 33602113 2661237 complement(3348260..3349165) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2102; lysR family transcriptional regulator 3349165 2661237 BB3137 Bordetella bronchiseptica RB50 lysR family transcriptional regulator NP_889673.1 3348260 R 257310 CDS NP_889674.1 33602114 2663916 3349261..3351510 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2101; hypothetical protein 3351510 2663916 BB3138 Bordetella bronchiseptica RB50 hypothetical protein NP_889674.1 3349261 D 257310 CDS NP_889675.1 33602115 2663918 3351756..3353240 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2100; hypothetical protein 3353240 2663918 BB3139 Bordetella bronchiseptica RB50 hypothetical protein NP_889675.1 3351756 D 257310 CDS NP_889676.1 33602116 2663919 3353251..3354447 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2099; acetyl-CoA acetyltransferase 3354447 2663919 BB3140 Bordetella bronchiseptica RB50 acetyl-CoA acetyltransferase NP_889676.1 3353251 D 257310 CDS NP_889677.1 33602117 2660279 3354520..3355839 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2098; acyl-CoA ligase 3355839 2660279 BB3141 Bordetella bronchiseptica RB50 acyl-CoA ligase NP_889677.1 3354520 D 257310 CDS NP_889678.1 33602118 2660280 3355836..3356723 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2097; esterase 3356723 2660280 BB3142 Bordetella bronchiseptica RB50 esterase NP_889678.1 3355836 D 257310 CDS NP_889679.1 33602119 2661009 complement(3356754..3357926) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2096; fatty-acyl-CoA racemase 3357926 2661009 BB3143 Bordetella bronchiseptica RB50 fatty-acyl-CoA racemase NP_889679.1 3356754 R 257310 CDS NP_889680.1 33602120 2660125 complement(3357923..3358237) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2095; ferredoxin 3358237 2660125 BB3144 Bordetella bronchiseptica RB50 ferredoxin NP_889680.1 3357923 R 257310 CDS NP_889681.1 33602121 2661085 complement(3358259..3358981) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2094; 3-oxoacyl-ACP reductase 3358981 2661085 BB3145 Bordetella bronchiseptica RB50 3-oxoacyl-ACP reductase NP_889681.1 3358259 R 257310 CDS NP_889682.1 33602122 2661416 complement(3358981..3359799) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2093; enoyl-CoA hydratase-like protein 3359799 2661416 BB3146 Bordetella bronchiseptica RB50 enoyl-CoA hydratase-like protein NP_889682.1 3358981 R 257310 CDS NP_889683.1 33602123 2661417 complement(3359804..3360331) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2092; dioxygenase 3360331 2661417 BB3147 Bordetella bronchiseptica RB50 dioxygenase NP_889683.1 3359804 R 257310 CDS NP_889684.1 33602124 2661620 complement(3360337..3361602) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2091; dioxygenase hydroxylase 3361602 2661620 BB3148 Bordetella bronchiseptica RB50 dioxygenase hydroxylase NP_889684.1 3360337 R 257310 CDS NP_889685.1 33602125 2661124 3361954..3363093 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2090; ABC transporter substrate-binding protein 3363093 2661124 BB3149 Bordetella bronchiseptica RB50 ABC transporter substrate-binding protein NP_889685.1 3361954 D 257310 CDS NP_889686.1 33602126 2661088 3363171..3364043 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2089; ABC transporter permease 3364043 2661088 BB3150 Bordetella bronchiseptica RB50 ABC transporter permease NP_889686.1 3363171 D 257310 CDS NP_889687.1 33602127 2661057 3364047..3365003 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2088+BP1648; ABC transporter permease 3365003 2661057 BB3151 Bordetella bronchiseptica RB50 ABC transporter permease NP_889687.1 3364047 D 257310 CDS NP_889688.1 33602128 2660740 3365000..3365782 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1649; high-affinity branched-chain amino acid transport ATP-binding protein 3365782 livG 2660740 livG Bordetella bronchiseptica RB50 high-affinity branched-chain amino acid transport ATP-binding protein NP_889688.1 3365000 D 257310 CDS NP_889689.1 33602129 2660799 3365776..3366477 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1650; high-affinity branched-chain amino acid transport ATP-binding protein 3366477 livF 2660799 livF Bordetella bronchiseptica RB50 high-affinity branched-chain amino acid transport ATP-binding protein NP_889689.1 3365776 D 257310 CDS NP_889690.1 33602130 2660825 3366716..3367318 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1651; TetR family transcriptional regulator 3367318 2660825 BB3154 Bordetella bronchiseptica RB50 TetR family transcriptional regulator NP_889690.1 3366716 D 257310 CDS NP_889691.1 33602131 2660826 complement(3367294..3368523) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1652; oxidoreductase 3368523 2660826 BB3155 Bordetella bronchiseptica RB50 oxidoreductase NP_889691.1 3367294 R 257310 CDS NP_889692.1 33602132 2660891 3368673..3369071 1 NC_002927.3 translational inhibitor 3369071 2660891 BB3156 Bordetella bronchiseptica RB50 translational inhibitor NP_889692.1 3368673 D 257310 CDS NP_889693.1 33602133 2660652 complement(3369073..3369390) 1 NC_002927.3 hypothetical protein 3369390 2660652 BB3157 Bordetella bronchiseptica RB50 hypothetical protein NP_889693.1 3369073 R 257310 CDS NP_889694.1 33602134 2660653 complement(3369624..3370031) 1 NC_002927.3 hypothetical protein 3370031 2660653 BB3158 Bordetella bronchiseptica RB50 hypothetical protein NP_889694.1 3369624 R 257310 CDS NP_889695.1 33602135 2660654 complement(3370372..3370749) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2182; hypothetical protein 3370749 2660654 BB3159 Bordetella bronchiseptica RB50 hypothetical protein NP_889695.1 3370372 R 257310 CDS NP_889696.1 33602136 2660655 complement(3370746..3371048) 1 NC_002927.3 hypothetical protein 3371048 2660655 BB3160 Bordetella bronchiseptica RB50 hypothetical protein NP_889696.1 3370746 R 257310 CDS NP_889697.1 33602137 2661516 complement(3371278..3373446) 1 NC_002927.3 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD 3373446 rpoD 2661516 rpoD Bordetella bronchiseptica RB50 RNA polymerase sigma factor RpoD NP_889697.1 3371278 R 257310 CDS NP_889698.1 33602138 2660918 complement(3374239..3376269) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2185; DNA primase 3376269 dnaG 2660918 dnaG Bordetella bronchiseptica RB50 DNA primase NP_889698.1 3374239 R 257310 CDS NP_889699.2 161609270 2659973 complement(3376289..3376501) 1 NC_002927.3 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 3376501 rpsU 2659973 rpsU Bordetella bronchiseptica RB50 30S ribosomal protein S21 NP_889699.2 3376289 R 257310 CDS NP_889700.1 33602140 2660707 complement(3376779..3377318) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2187; transferase 3377318 2660707 BB3164 Bordetella bronchiseptica RB50 transferase NP_889700.1 3376779 R 257310 CDS NP_889701.1 33602141 2660561 complement(3377432..3378739) 1 NC_002927.3 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 3378739 purA 2660561 purA Bordetella bronchiseptica RB50 adenylosuccinate synthetase NP_889701.1 3377432 R 257310 CDS NP_889702.1 33602142 2661588 complement(3378804..3379961) 1 NC_002927.3 May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine; ATP phosphoribosyltransferase regulatory subunit 3379961 hisZ 2661588 hisZ Bordetella bronchiseptica RB50 ATP phosphoribosyltransferase regulatory subunit NP_889702.1 3378804 R 257310 CDS NP_889703.1 33602143 2661589 complement(3380145..3381044) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2190; inner membrane-anchored protein 3381044 hflC 2661589 hflC Bordetella bronchiseptica RB50 inner membrane-anchored protein NP_889703.1 3380145 R 257310 CDS NP_889704.1 33602144 2659927 complement(3381063..3382205) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2191; hypothetical protein 3382205 hflK 2659927 hflK Bordetella bronchiseptica RB50 hypothetical protein NP_889704.1 3381063 R 257310 CDS NP_889705.1 33602145 2660578 complement(3382333..3383370) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2192; GTP-binding protein 3383370 hflX 2660578 hflX Bordetella bronchiseptica RB50 GTP-binding protein NP_889705.1 3382333 R 257310 CDS NP_889706.1 33602146 2659362 complement(3383527..3383763) 1 NC_002927.3 Stimulates the elongation of poly(A) tails; RNA-binding protein Hfq 3383763 hfq 2659362 hfq Bordetella bronchiseptica RB50 RNA-binding protein Hfq NP_889706.1 3383527 R 257310 CDS NP_889707.1 33602147 2659363 complement(3383902..3384972) 1 NC_002927.3 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 3384972 hisC 2659363 hisC Bordetella bronchiseptica RB50 histidinol-phosphate aminotransferase NP_889707.1 3383902 R 257310 CDS NP_889708.1 33602148 2658981 complement(3384976..3386331) 1 NC_002927.3 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 3386331 engA 2658981 engA Bordetella bronchiseptica RB50 GTP-binding protein EngA NP_889708.1 3384976 R 257310 CDS NP_889709.1 33602149 2659086 complement(3386358..3387518) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2196; quinoprotein 3387518 2659086 BB3173 Bordetella bronchiseptica RB50 quinoprotein NP_889709.1 3386358 R 257310 CDS NP_889710.1 33602150 2661594 complement(3387521..3388159) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2197; hypothetical protein 3388159 2661594 BB3174 Bordetella bronchiseptica RB50 hypothetical protein NP_889710.1 3387521 R 257310 CDS NP_889711.1 33602151 2659506 complement(3388161..3389447) 1 NC_002927.3 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 3389447 hisS 2659506 hisS Bordetella bronchiseptica RB50 histidyl-tRNA synthetase NP_889711.1 3388161 R 257310 CDS NP_889712.1 33602152 2659792 complement(3389500..3390801) 1 NC_002927.3 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 3390801 ispG 2659792 ispG Bordetella bronchiseptica RB50 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase NP_889712.1 3389500 R 257310 CDS NP_889713.1 33602153 2659793 complement(3390808..3391314) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2200; hypothetical protein 3391314 2659793 BB3177 Bordetella bronchiseptica RB50 hypothetical protein NP_889713.1 3390808 R 257310 CDS NP_889714.1 33602154 2661269 complement(3391311..3392459) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2201; hypothetical protein 3392459 2661269 BB3178 Bordetella bronchiseptica RB50 hypothetical protein NP_889714.1 3391311 R 257310 CDS NP_889715.1 33602155 2661270 complement(3392487..3392912) 1 NC_002927.3 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 3392912 ndk 2661270 ndk Bordetella bronchiseptica RB50 nucleoside diphosphate kinase NP_889715.1 3392487 R 257310 CDS NP_889716.1 33602156 2660619 3393234..3396116 1 NC_002927.3 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 3396116 valS 2660619 valS Bordetella bronchiseptica RB50 valyl-tRNA synthetase NP_889716.1 3393234 D 257310 CDS NP_889717.1 33602157 2659667 complement(3396209..3396964) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2204; outer membrane (scaffolding) protein 3396964 2659667 BB3181 Bordetella bronchiseptica RB50 outer membrane (scaffolding) protein NP_889717.1 3396209 R 257310 CDS NP_889718.1 33602158 2659668 3397094..3397765 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2205; two-component response regulator 3397765 2659668 BB3182 Bordetella bronchiseptica RB50 two-component response regulator NP_889718.1 3397094 D 257310 CDS NP_889719.1 33602159 2661170 3397762..3399111 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2206; two component sensor kinase 3399111 2661170 BB3183 Bordetella bronchiseptica RB50 two component sensor kinase NP_889719.1 3397762 D 257310 CDS NP_889720.1 33602160 2660579 3399153..3399659 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1843; hypothetical protein 3399659 2660579 BB3184 Bordetella bronchiseptica RB50 hypothetical protein NP_889720.1 3399153 D 257310 CDS NP_889721.1 33602161 2662641 3399685..3400893 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1842; class-V aminotransferase 3400893 2662641 BB3185 Bordetella bronchiseptica RB50 class-V aminotransferase NP_889721.1 3399685 D 257310 CDS NP_889722.1 33602162 2660022 complement(3400890..3401663) 1 NC_002927.3 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 3401663 trmD 2660022 trmD Bordetella bronchiseptica RB50 tRNA (guanine-N(1)-)-methyltransferase NP_889722.1 3400890 R 257310 CDS NP_889723.1 33602163 2660023 complement(3401663..3402286) 1 NC_002927.3 Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 3402286 rimM 2660023 rimM Bordetella bronchiseptica RB50 16S rRNA-processing protein RimM NP_889723.1 3401663 R 257310 CDS NP_889724.2 161609269 2660539 complement(3402452..3402712) 1 NC_002927.3 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 3402712 rpsP 2660539 rpsP Bordetella bronchiseptica RB50 30S ribosomal protein S16 NP_889724.2 3402452 R 257310 CDS NP_889725.1 33602165 2660540 3403016..3403597 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1838; hypothetical protein 3403597 2660540 BB3189 Bordetella bronchiseptica RB50 hypothetical protein NP_889725.1 3403016 D 257310 CDS NP_889726.1 33602166 2660541 complement(3403666..3403920) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1837; hypothetical protein 3403920 2660541 BB3190 Bordetella bronchiseptica RB50 hypothetical protein NP_889726.1 3403666 R 257310 CDS NP_889727.1 33602167 2660548 complement(3403907..3406531) 1 NC_002927.3 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 3406531 alaS 2660548 alaS Bordetella bronchiseptica RB50 alanyl-tRNA synthetase NP_889727.1 3403907 R 257310 CDS NP_889728.1 33602168 2661070 complement(3406603..3407421) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1835; hypothetical protein 3407421 2661070 BB3192 Bordetella bronchiseptica RB50 hypothetical protein NP_889728.1 3406603 R 257310 CDS NP_889729.1 33602169 2661071 complement(3407418..3408023) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1834; fimbrial protein 3408023 2661071 BB3193 Bordetella bronchiseptica RB50 fimbrial protein NP_889729.1 3407418 R 257310 CDS NP_889730.1 33602170 2659802 complement(3408061..3409194) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1833; general secretion pathway protein 3409194 2659802 BB3194 Bordetella bronchiseptica RB50 general secretion pathway protein NP_889730.1 3408061 R 257310 CDS NP_889731.1 33602171 2659803 complement(3409187..3410902) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1832; general secretion pathway protein 3410902 2659803 BB3195 Bordetella bronchiseptica RB50 general secretion pathway protein NP_889731.1 3409187 R 257310 CDS NP_889732.1 33602172 2661382 complement(3410899..3411282) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1831; hypothetical protein 3411282 2661382 BB3196 Bordetella bronchiseptica RB50 hypothetical protein NP_889732.1 3410899 R 257310 CDS NP_889733.1 33602173 2661383 complement(3411380..3412648) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1830; hypothetical protein 3412648 2661383 BB3197 Bordetella bronchiseptica RB50 hypothetical protein NP_889733.1 3411380 R 257310 CDS NP_889734.1 33602174 2661384 complement(3412652..3414229) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1829; lipoprotein 3414229 2661384 BB3198 Bordetella bronchiseptica RB50 lipoprotein NP_889734.1 3412652 R 257310 CDS NP_889735.1 33602175 2661443 complement(3414226..3414987) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1828; lipoprotein 3414987 2661443 BB3199 Bordetella bronchiseptica RB50 lipoprotein NP_889735.1 3414226 R 257310 CDS NP_889736.1 33602176 2661468 complement(3415165..3416520) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1827; amidase 3416520 2661468 BB3200 Bordetella bronchiseptica RB50 amidase NP_889736.1 3415165 R 257310 CDS NP_889737.1 33602177 2661528 complement(3416517..3418151) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1826; ABC transporter ATP-binding protein 3418151 2661528 BB3201 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_889737.1 3416517 R 257310 CDS NP_889738.1 33602178 2659177 complement(3418144..3418974) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1825; inner membrane component of binding-protein-dependent transport system 3418974 2659177 BB3202 Bordetella bronchiseptica RB50 inner membrane component of binding-protein-dependent transport system NP_889738.1 3418144 R 257310 CDS NP_889739.1 33602179 2659407 complement(3418992..3419936) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1824; inner membrane component of binding-protein-dependent transport system 3419936 2659407 BB3203 Bordetella bronchiseptica RB50 inner membrane component of binding-protein-dependent transport system NP_889739.1 3418992 R 257310 CDS NP_889740.1 33602180 2660117 complement(3419989..3421563) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1823; peptide ABC transporter substrate-binding protein 3421563 2660117 BB3204 Bordetella bronchiseptica RB50 peptide ABC transporter substrate-binding protein NP_889740.1 3419989 R 257310 CDS NP_889741.1 33602181 2659150 complement(3421611..3421961) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1822; hypothetical protein 3421961 2659150 BB3205 Bordetella bronchiseptica RB50 hypothetical protein NP_889741.1 3421611 R 257310 CDS NP_889742.1 33602182 2659151 complement(3421963..3423339) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1821; hypothetical protein 3423339 2659151 BB3206 Bordetella bronchiseptica RB50 hypothetical protein NP_889742.1 3421963 R 257310 CDS NP_889743.1 33602183 2659152 3423436..3424386 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1820; LysR family transcriptional regulator 3424386 2659152 BB3207 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_889743.1 3423436 D 257310 CDS NP_889744.1 33602184 2659128 complement(3424656..3425993) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1819; glycerol-3-phosphate ABC transporter substrate-binding protein 3425993 ugpB 2659128 ugpB Bordetella bronchiseptica RB50 glycerol-3-phosphate ABC transporter substrate-binding protein NP_889744.1 3424656 R 257310 CDS NP_889745.1 33602185 2659129 complement(3425998..3427254) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1818; D-amino acid dehydrogenase small subunit 3427254 dadA 2659129 dadA Bordetella bronchiseptica RB50 D-amino acid dehydrogenase small subunit NP_889745.1 3425998 R 257310 CDS NP_889746.1 33602186 2663429 complement(3427450..3428496) 1 NC_002927.3 catalyzes the formation of 3,6-dideoxy-D-glycero-D-glycero-4-hexulose; CDP-6-deoxy-delta-3,4-glucoseen reductase 3428496 ascD 2663429 ascD Bordetella bronchiseptica RB50 CDP-6-deoxy-delta-3,4-glucoseen reductase NP_889746.1 3427450 R 257310 CDS NP_889747.1 33602187 2661273 complement(3428554..3428922) 1 NC_002927.3 Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase 3428922 panD 2661273 panD Bordetella bronchiseptica RB50 aspartate alpha-decarboxylase NP_889747.1 3428554 R 257310 CDS NP_889748.1 33602188 2661344 complement(3429053..3429925) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1815; hypothetical protein 3429925 2661344 BB3212 Bordetella bronchiseptica RB50 hypothetical protein NP_889748.1 3429053 R 257310 CDS NP_889749.1 33602189 2660788 complement(3430002..3430904) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1814; GntR family transcriptional regulator 3430904 2660788 BB3213 Bordetella bronchiseptica RB50 GntR family transcriptional regulator NP_889749.1 3430002 R 257310 CDS NP_889750.1 33602190 2660789 complement(3430909..3431964) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1813; pyridoxal phosphate biosynthetic protein 3431964 pdxA 2660789 pdxA Bordetella bronchiseptica RB50 pyridoxal phosphate biosynthetic protein NP_889750.1 3430909 R 257310 CDS NP_889751.1 33602191 2659458 complement(3431961..3433178) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1812; hypothetical protein 3433178 2659458 BB3215 Bordetella bronchiseptica RB50 hypothetical protein NP_889751.1 3431961 R 257310 CDS NP_889752.1 33602192 2659459 complement(3433179..3434201) 1 NC_002927.3 transports degraded pectin products into the bacterial cell; 2-keto-3-deoxygluconate permease 3434201 kdgT 2659459 kdgT Bordetella bronchiseptica RB50 2-keto-3-deoxygluconate permease NP_889752.1 3433179 R 257310 CDS NP_889753.1 33602193 2662598 complement(3434451..3435377) 1 NC_002927.3 L-proline 4-hydroxylase 3435377 2662598 BB3217 Bordetella bronchiseptica RB50 L-proline 4-hydroxylase NP_889753.1 3434451 R 257310 CDS NP_889754.1 33602194 2662599 complement(3435396..3435791) 1 NC_002927.3 N-acetyldiaminobutyrate dehydratase; catalyzes the formation of the osmoprotectant ecotoine from gamma-N-acetyl-alpha,gamma-diaminobutyric acid; L-ectoine synthase 3435791 ectC 2662599 ectC Bordetella bronchiseptica RB50 L-ectoine synthase NP_889754.1 3435396 R 257310 CDS NP_889755.1 33602195 2662600 complement(3435788..3437095) 1 NC_002927.3 catalyzes the reversible formation of diaminobutyrate and 2-oxoglutarate from glutamate and L-aspartic beta-semialdehyde; diaminobutyrate--2-oxoglutarate aminotransferase 3437095 ectB 2662600 ectB Bordetella bronchiseptica RB50 diaminobutyrate--2-oxoglutarate aminotransferase NP_889755.1 3435788 R 257310 CDS NP_889756.1 33602196 2662635 complement(3437206..3437766) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2215; L-2,4-diaminobutyric acid acetyltransferase 3437766 ectA 2662635 ectA Bordetella bronchiseptica RB50 L-2,4-diaminobutyric acid acetyltransferase NP_889756.1 3437206 R 257310 CDS NP_889757.1 33602197 2661283 complement(3437763..3438374) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2216; MarR family transcriptional regulator 3438374 2661283 BB3221 Bordetella bronchiseptica RB50 MarR family transcriptional regulator NP_889757.1 3437763 R 257310 CDS NP_889758.1 33602198 2659499 3438504..3439538 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2217; SIS family regulator 3439538 2659499 BB3222 Bordetella bronchiseptica RB50 SIS family regulator NP_889758.1 3438504 D 257310 CDS NP_889759.1 33602199 2659500 3439579..3440919 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2218; hypothetical protein 3440919 2659500 BB3223 Bordetella bronchiseptica RB50 hypothetical protein NP_889759.1 3439579 D 257310 CDS NP_889760.1 33602200 2660531 3441028..3442032 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2219; cell surface protein 3442032 2660531 BB3224 Bordetella bronchiseptica RB50 cell surface protein NP_889760.1 3441028 D 257310 CDS NP_889761.1 33602201 2660549 3442139..3444739 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2220; inner membrane protein 3444739 2660549 BB3225 Bordetella bronchiseptica RB50 inner membrane protein NP_889761.1 3442139 D 257310 CDS NP_889762.1 33602202 2660550 complement(3444736..3445947) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1267; hypothetical protein 3445947 2660550 BB3226 Bordetella bronchiseptica RB50 hypothetical protein NP_889762.1 3444736 R 257310 CDS NP_889763.1 33602203 2660944 complement(3445950..3448265) 1 NC_002927.3 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 3448265 parC 2660944 parC Bordetella bronchiseptica RB50 DNA topoisomerase IV subunit A NP_889763.1 3445950 R 257310 CDS NP_889764.1 33602204 2660945 complement(3448283..3448894) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1265; hypothetical protein 3448894 2660945 BB3228 Bordetella bronchiseptica RB50 hypothetical protein NP_889764.1 3448283 R 257310 CDS NP_889765.1 33602205 2659949 complement(3448894..3450906) 1 NC_002927.3 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 3450906 parE 2659949 parE Bordetella bronchiseptica RB50 DNA topoisomerase IV subunit B NP_889765.1 3448894 R 257310 CDS NP_889766.1 33602206 2662580 3451049..3451474 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1263; thioredoxin 1 3451474 trxA 2662580 trxA Bordetella bronchiseptica RB50 thioredoxin 1 NP_889766.1 3451049 D 257310 CDS NP_889767.1 33602207 2662581 3451586..3452842 1 NC_002927.3 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 3452842 rho 2662581 rho Bordetella bronchiseptica RB50 transcription termination factor Rho NP_889767.1 3451586 D 257310 CDS NP_889768.1 33602208 2659740 complement(3452910..3456569) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1261; hypothetical protein 3456569 2659740 BB3232 Bordetella bronchiseptica RB50 hypothetical protein NP_889768.1 3452910 R 257310 CDS NP_889769.1 33602209 2659741 3456603..3459428 1 NC_002927.3 catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 3459428 glnE 2659741 glnE Bordetella bronchiseptica RB50 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase NP_889769.1 3456603 D 257310 CDS NP_889770.1 33602210 2659627 3459464..3460123 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1259; hypothetical protein 3460123 2659627 BB3234 Bordetella bronchiseptica RB50 hypothetical protein NP_889770.1 3459464 D 257310 CDS NP_889771.1 33602211 2659197 complement(3460274..3461671) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1258; L-serine dehydratase 1 3461671 sdaA 2659197 sdaA Bordetella bronchiseptica RB50 L-serine dehydratase 1 NP_889771.1 3460274 R 257310 CDS NP_889772.1 33602212 2659628 3461833..3463494 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1257; hypothetical protein 3463494 2659628 BB3236 Bordetella bronchiseptica RB50 hypothetical protein NP_889772.1 3461833 D 257310 CDS NP_889773.1 33602213 2661779 complement(3463528..3464316) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1256; carboxymethylenebutenolidase 3464316 2661779 BB3237 Bordetella bronchiseptica RB50 carboxymethylenebutenolidase NP_889773.1 3463528 R 257310 CDS NP_889774.1 33602214 2661780 complement(3464371..3465207) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1255; hypothetical protein 3465207 2661780 BB3238 Bordetella bronchiseptica RB50 hypothetical protein NP_889774.1 3464371 R 257310 CDS NP_889775.1 33602215 2662000 complement(3465318..3468032) 1 NC_002927.3 has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I 3468032 polA 2662000 polA Bordetella bronchiseptica RB50 DNA polymerase I NP_889775.1 3465318 R 257310 CDS NP_889776.1 33602216 2662650 3468142..3468714 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1253; hypothetical protein 3468714 2662650 BB3240 Bordetella bronchiseptica RB50 hypothetical protein NP_889776.1 3468142 D 257310 CDS NP_889777.1 33602217 2660819 3468863..3469267 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1252; hypothetical protein 3469267 2660819 BB3241 Bordetella bronchiseptica RB50 hypothetical protein NP_889777.1 3468863 D 257310 CDS NP_889778.1 33602218 2660820 3469264..3469989 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1251; toxin 3469989 2660820 BB3242 Bordetella bronchiseptica RB50 toxin NP_889778.1 3469264 D 257310 CDS NP_889779.1 33602219 2662607 complement(3470060..3471880) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1250; GTP-binding elongation factor 3471880 typA 2662607 typA Bordetella bronchiseptica RB50 GTP-binding elongation factor NP_889779.1 3470060 R 257310 CDS NP_889780.1 33602220 2660328 complement(3471897..3472631) 1 NC_002927.3 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 3472631 truB 2660328 truB Bordetella bronchiseptica RB50 tRNA pseudouridine synthase B NP_889780.1 3471897 R 257310 CDS NP_889781.1 33602221 2660326 complement(3472676..3473077) 1 NC_002927.3 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 3473077 rbfA 2660326 rbfA Bordetella bronchiseptica RB50 ribosome-binding factor A NP_889781.1 3472676 R 257310 CDS NP_889782.1 33602222 2660327 complement(3473105..3476098) 1 NC_002927.3 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 3476098 infB 2660327 infB Bordetella bronchiseptica RB50 translation initiation factor IF-2 NP_889782.1 3473105 R 257310 CDS NP_889783.1 33602223 2661051 complement(3476175..3477653) 1 NC_002927.3 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 3477653 nusA 2661051 nusA Bordetella bronchiseptica RB50 transcription elongation factor NusA NP_889783.1 3476175 R 257310 CDS NP_889784.1 33602224 2660590 complement(3477650..3478156) 1 NC_002927.3 in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein 3478156 2660590 BB3248 Bordetella bronchiseptica RB50 hypothetical protein NP_889784.1 3477650 R 257310 CDS NP_889785.1 33602225 2660591 complement(3478618..3480399) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1244; hypothetical protein 3480399 2660591 BB3249 Bordetella bronchiseptica RB50 hypothetical protein NP_889785.1 3478618 R 257310 CDS NP_889786.1 33602226 2660731 complement(3480396..3481490) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1243; hypothetical protein 3481490 2660731 BB3250 Bordetella bronchiseptica RB50 hypothetical protein NP_889786.1 3480396 R 257310 CDS NP_889787.1 33602227 2659837 complement(3482451..3483362) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1242; LysR family transcriptional regulator 3483362 2659837 BB3251 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_889787.1 3482451 R 257310 CDS NP_889788.1 33602228 2660530 3483467..3484057 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1241; hypothetical protein 3484057 2660530 BB3252 Bordetella bronchiseptica RB50 hypothetical protein NP_889788.1 3483467 D 257310 CDS NP_889789.1 33602229 2660766 complement(3484110..3485207) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1240; hypothetical protein 3485207 2660766 BB3253 Bordetella bronchiseptica RB50 hypothetical protein NP_889789.1 3484110 R 257310 CDS NP_889790.1 33602230 2659926 3485324..3485659 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1239; hypothetical protein 3485659 2659926 BB3254 Bordetella bronchiseptica RB50 hypothetical protein NP_889790.1 3485324 D 257310 CDS NP_889791.1 33602231 2661459 complement(3486158..3486802) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1238; glutathione-S-transferase 3486802 2661459 BB3255 Bordetella bronchiseptica RB50 glutathione-S-transferase NP_889791.1 3486158 R 257310 CDS NP_889792.1 33602232 2661460 complement(3486841..3487821) 1 NC_002927.3 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 3487821 ispH 2661460 ispH Bordetella bronchiseptica RB50 4-hydroxy-3-methylbut-2-enyl diphosphate reductase NP_889792.1 3486841 R 257310 CDS NP_889793.1 33602233 2659420 complement(3487818..3488294) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1236; FkbP-type peptidyl-prolyl cis-trans isomerase 3488294 fkpB 2659420 fkpB Bordetella bronchiseptica RB50 FkbP-type peptidyl-prolyl cis-trans isomerase NP_889793.1 3487818 R 257310 CDS NP_889794.1 33602234 2659421 3488347..3489024 1 NC_002927.3 Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC 3489024 radC 2659421 radC Bordetella bronchiseptica RB50 DNA repair protein RadC NP_889794.1 3488347 D 257310 CDS NP_889795.1 33602235 2661432 3489111..3489740 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1234; hypothetical protein 3489740 2661432 BB3259 Bordetella bronchiseptica RB50 hypothetical protein NP_889795.1 3489111 D 257310 CDS NP_889796.1 33602236 2661433 3489768..3490622 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1233; tryptophan oxygenase 3490622 2661433 BB3260 Bordetella bronchiseptica RB50 tryptophan oxygenase NP_889796.1 3489768 D 257310 CDS NP_889797.1 33602237 2659437 3490791..3491057 1 NC_002927.3 RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 3491057 rpmE2 2659437 rpmE2 Bordetella bronchiseptica RB50 50S ribosomal protein L31 NP_889797.1 3490791 D 257310 CDS NP_889798.1 33602238 2659785 3491173..3492909 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1231; hypothetical protein 3492909 2659785 BB3262 Bordetella bronchiseptica RB50 hypothetical protein NP_889798.1 3491173 D 257310 CDS NP_889799.1 33602239 2659786 3492906..3494312 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1230; multidrug resistance protein 3494312 norM 2659786 norM Bordetella bronchiseptica RB50 multidrug resistance protein NP_889799.1 3492906 D 257310 CDS NP_889800.1 33602240 2659758 complement(3494380..3494607) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1229; hypothetical protein 3494607 2659758 BB3264 Bordetella bronchiseptica RB50 hypothetical protein NP_889800.1 3494380 R 257310 CDS NP_889801.1 33602241 2662234 complement(3494766..3495539) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1228; hypothetical protein 3495539 2662234 BB3265 Bordetella bronchiseptica RB50 hypothetical protein NP_889801.1 3494766 R 257310 CDS NP_889802.1 33602242 2661942 complement(3495562..3496815) 1 NC_002927.3 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 3496815 radA 2661942 radA Bordetella bronchiseptica RB50 DNA repair protein RadA NP_889802.1 3495562 R 257310 CDS NP_889803.1 33602243 2661943 3497050..3498765 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1226; hypothetical protein 3498765 2661943 BB3267 Bordetella bronchiseptica RB50 hypothetical protein NP_889803.1 3497050 D 257310 CDS NP_889804.2 161609268 2663897 3498843..3499421 1 NC_002927.3 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 3499421 2663897 BB3268 Bordetella bronchiseptica RB50 RNA polymerase sigma factor NP_889804.2 3498843 D 257310 CDS NP_889805.1 33602245 2660028 3499425..3500147 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1223; hypothetical protein 3500147 2660028 BB3269 Bordetella bronchiseptica RB50 hypothetical protein NP_889805.1 3499425 D 257310 CDS NP_889806.1 33602246 2659048 complement(3500161..3500877) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1222; short chain dehydrogenase 3500877 2659048 BB3270 Bordetella bronchiseptica RB50 short chain dehydrogenase NP_889806.1 3500161 R 257310 CDS NP_889807.1 33602247 2659049 complement(3501029..3502156) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1221; alanine racemase, catabolic 3502156 dadX 2659049 dadX Bordetella bronchiseptica RB50 alanine racemase, catabolic NP_889807.1 3501029 R 257310 CDS NP_889808.1 33602248 2660054 3502285..3503115 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1220; phytoene synthase 3503115 2660054 BB3272 Bordetella bronchiseptica RB50 phytoene synthase NP_889808.1 3502285 D 257310 CDS NP_889809.1 33602249 2661180 3503117..3503980 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1219; phytoene synthase 3503980 2661180 BB3273 Bordetella bronchiseptica RB50 phytoene synthase NP_889809.1 3503117 D 257310 CDS NP_889810.1 33602250 2659070 3503977..3505308 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1218; hypothetical protein 3505308 2659070 BB3274 Bordetella bronchiseptica RB50 hypothetical protein NP_889810.1 3503977 D 257310 CDS NP_889811.1 33602251 2660100 complement(3505331..3505717) 1 NC_002927.3 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB 3505717 ccrB 2660100 ccrB Bordetella bronchiseptica RB50 camphor resistance protein CrcB NP_889811.1 3505331 R 257310 CDS NP_889812.1 33602252 2660516 complement(3505727..3506287) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1216; hypothetical protein 3506287 2660516 BB3276 Bordetella bronchiseptica RB50 hypothetical protein NP_889812.1 3505727 R 257310 CDS NP_889813.1 33602253 2660517 complement(3506388..3507173) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1215; ABC transporter permease 3507173 nodJ 2660517 nodJ Bordetella bronchiseptica RB50 ABC transporter permease NP_889813.1 3506388 R 257310 CDS NP_889814.1 33602254 2662605 complement(3507170..3508117) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1214; ABC transporter ATP-binding protein 3508117 nodI 2662605 nodI Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_889814.1 3507170 R 257310 CDS NP_889815.1 33602255 2660702 3508265..3508894 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1213; hypothetical protein 3508894 2660702 BB3279 Bordetella bronchiseptica RB50 hypothetical protein NP_889815.1 3508265 D 257310 CDS NP_889816.1 33602256 2660703 3508917..3509432 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1212; hypothetical protein 3509432 2660703 BB3280 Bordetella bronchiseptica RB50 hypothetical protein NP_889816.1 3508917 D 257310 CDS NP_889817.1 33602257 2660983 3509462..3510262 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1211; hypothetical protein 3510262 2660983 BB3281 Bordetella bronchiseptica RB50 hypothetical protein NP_889817.1 3509462 D 257310 CDS NP_889818.1 33602258 2660984 3510267..3511283 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1210; thiamine biosynthesis protein 3511283 apbE 2660984 apbE Bordetella bronchiseptica RB50 thiamine biosynthesis protein NP_889818.1 3510267 D 257310 CDS NP_889819.1 33602259 2660985 3511283..3512662 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1209; oxidoreductase 3512662 2660985 BB3283 Bordetella bronchiseptica RB50 oxidoreductase NP_889819.1 3511283 D 257310 CDS NP_889820.1 33602260 2659967 complement(3512678..3513634) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1208; hypothetical protein 3513634 2659967 BB3284 Bordetella bronchiseptica RB50 hypothetical protein NP_889820.1 3512678 R 257310 CDS NP_889821.1 33602261 2659968 complement(3513682..3515124) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1207; N-acyl-D-glutamate deacylase 3515124 2659968 BB3285 Bordetella bronchiseptica RB50 N-acyl-D-glutamate deacylase NP_889821.1 3513682 R 257310 CDS NP_889822.1 33602262 2659969 3515229..3516191 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1206; LysR family transcriptional regulator 3516191 2659969 BB3286 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_889822.1 3515229 D 257310 CDS NP_889823.1 33602263 2659477 complement(3516199..3516651) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1205; hypothetical protein 3516651 2659477 BB3287 Bordetella bronchiseptica RB50 hypothetical protein NP_889823.1 3516199 R 257310 CDS NP_889824.1 33602264 2659478 complement(3516719..3517549) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1204; hypothetical protein 3517549 2659478 BB3288 Bordetella bronchiseptica RB50 hypothetical protein NP_889824.1 3516719 R 257310 CDS NP_889825.1 33602265 2659479 complement(3517559..3518767) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1203; hypothetical protein 3518767 2659479 BB3289 Bordetella bronchiseptica RB50 hypothetical protein NP_889825.1 3517559 R 257310 CDS NP_889826.1 33602266 2660485 3518931..3519614 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1202; TetR family transcriptional regulator 3519614 2660485 BB3290 Bordetella bronchiseptica RB50 TetR family transcriptional regulator NP_889826.1 3518931 D 257310 CDS NP_889827.1 33602267 2660515 complement(3521978..3523819) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1200; autotransporter 3523819 bapB 2660515 bapB Bordetella bronchiseptica RB50 autotransporter NP_889827.1 3521978 R 257310 CDS NP_889828.1 33602268 2659866 complement(3524136..3526733) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1198; ATP-dependent protease, ATPase subunit 3526733 clpB 2659866 clpB Bordetella bronchiseptica RB50 ATP-dependent protease, ATPase subunit NP_889828.1 3524136 R 257310 CDS NP_889829.1 33602269 2659035 3527056..3527784 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1197; transcriptional regulatory protein 3527784 btr 2659035 btr Bordetella bronchiseptica RB50 transcriptional regulatory protein NP_889829.1 3527056 D 257310 CDS NP_889830.1 33602270 2661992 3527781..3528935 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1196; hypothetical protein 3528935 2661992 BB3295 Bordetella bronchiseptica RB50 hypothetical protein NP_889830.1 3527781 D 257310 CDS NP_889831.1 33602271 2661993 complement(3528972..3529313) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1195; ferredoxin 3529313 2661993 BB3296 Bordetella bronchiseptica RB50 ferredoxin NP_889831.1 3528972 R 257310 CDS NP_889832.1 33602272 2660095 complement(3529310..3529927) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1194; hypothetical protein 3529927 2660095 BB3297 Bordetella bronchiseptica RB50 hypothetical protein NP_889832.1 3529310 R 257310 CDS NP_889833.1 33602273 2660096 complement(3529977..3530195) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1193; hypothetical protein 3530195 2660096 BB3298 Bordetella bronchiseptica RB50 hypothetical protein NP_889833.1 3529977 R 257310 CDS NP_889834.1 33602274 2662191 complement(3530220..3530546) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1192; hypothetical protein 3530546 2662191 BB3299 Bordetella bronchiseptica RB50 hypothetical protein NP_889834.1 3530220 R 257310 CDS NP_889835.1 33602275 2662192 complement(3530691..3531596) 1 NC_002927.3 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor SigJ 3531596 2662192 BB3300 Bordetella bronchiseptica RB50 RNA polymerase sigma factor SigJ NP_889835.1 3530691 R 257310 CDS NP_889836.1 33602276 2662193 complement(3531589..3532035) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1190; hypothetical protein 3532035 2662193 BB3301 Bordetella bronchiseptica RB50 hypothetical protein NP_889836.1 3531589 R 257310 CDS NP_889837.1 33602277 2661254 3532263..3532691 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1189; lipoprotein 3532691 2661254 BB3302 Bordetella bronchiseptica RB50 lipoprotein NP_889837.1 3532263 D 257310 CDS NP_889838.1 33602278 2661255 complement(3532699..3532917) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1188A; hypothetical protein 3532917 2661255 BB3303 Bordetella bronchiseptica RB50 hypothetical protein NP_889838.1 3532699 R 257310 CDS NP_889839.1 33602279 2661791 complement(3532929..3533813) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1188; hypothetical protein 3533813 2661791 BB3304 Bordetella bronchiseptica RB50 hypothetical protein NP_889839.1 3532929 R 257310 CDS NP_889840.1 33602280 2661792 3534507..3535130 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1186; hypothetical protein 3535130 2661792 BB3305 Bordetella bronchiseptica RB50 hypothetical protein NP_889840.1 3534507 D 257310 CDS NP_889841.1 33602281 2661793 3535127..3536329 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1185; aspartate aminotransferase 3536329 aspC 2661793 aspC Bordetella bronchiseptica RB50 aspartate aminotransferase NP_889841.1 3535127 D 257310 CDS NP_889842.1 33602282 2660494 3536395..3537213 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1184; substrate-binding protein 3537213 2660494 BB3307 Bordetella bronchiseptica RB50 substrate-binding protein NP_889842.1 3536395 D 257310 CDS NP_889843.1 33602283 2662222 3537317..3538006 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1183; amino acids ABC transporter permease 3538006 2662222 BB3308 Bordetella bronchiseptica RB50 amino acids ABC transporter permease NP_889843.1 3537317 D 257310 CDS NP_889844.1 33602284 2661873 3537999..3538688 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1182; amino acids ABC transporter permease 3538688 2661873 BB3309 Bordetella bronchiseptica RB50 amino acids ABC transporter permease NP_889844.1 3537999 D 257310 CDS NP_889845.1 33602285 2660420 3538708..3539445 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1181; amino acids ABC transporter ATP-binding protein 3539445 glnQ 2660420 glnQ Bordetella bronchiseptica RB50 amino acids ABC transporter ATP-binding protein NP_889845.1 3538708 D 257310 CDS NP_889846.1 33602286 2661139 3539519..3540493 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1180; LysR family transcriptional regulator 3540493 2661139 BB3311 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_889846.1 3539519 D 257310 CDS NP_889847.1 33602287 2661563 3540839..3541702 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1178; hypothetical protein 3541702 2661563 BB3312 Bordetella bronchiseptica RB50 hypothetical protein NP_889847.1 3540839 D 257310 CDS NP_889848.1 33602288 2661868 complement(3541951..3542361) 1 NC_002927.3 dioxygenase 3542361 2661868 BB3313 Bordetella bronchiseptica RB50 dioxygenase NP_889848.1 3541951 R 257310 CDS NP_889849.1 33602289 2659195 3542536..3542748 1 NC_002927.3 hypothetical protein 3542748 2659195 BB3314 Bordetella bronchiseptica RB50 hypothetical protein NP_889849.1 3542536 D 257310 CDS NP_889850.1 33602290 2659196 complement(3542847..3544133) 1 NC_002927.3 transporter 3544133 2659196 BB3315 Bordetella bronchiseptica RB50 transporter NP_889850.1 3542847 R 257310 CDS NP_889851.1 33602291 2661706 3544243..3545133 1 NC_002927.3 LysR family transcriptional regulator 3545133 2661706 BB3316 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_889851.1 3544243 D 257310 CDS NP_889852.1 33602292 2659036 3545256..3547331 1 NC_002927.3 signalling protein 3547331 2659036 BB3317 Bordetella bronchiseptica RB50 signalling protein NP_889852.1 3545256 D 257310 CDS NP_889853.1 33602293 2660013 3547432..3548514 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2180; hypothetical protein 3548514 2660013 BB3318 Bordetella bronchiseptica RB50 hypothetical protein NP_889853.1 3547432 D 257310 CDS NP_889854.1 33602294 2662697 complement(3548530..3549291) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2179; ABC transporter 3549291 2662697 BB3319 Bordetella bronchiseptica RB50 ABC transporter NP_889854.1 3548530 R 257310 CDS NP_889855.1 33602295 2659580 complement(3549288..3550211) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2178; ABC transporter ATP-binding protein 3550211 2659580 BB3320 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_889855.1 3549288 R 257310 CDS NP_889856.1 33602296 2660496 complement(3550310..3550834) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2177; hypothetical protein 3550834 2660496 BB3321 Bordetella bronchiseptica RB50 hypothetical protein NP_889856.1 3550310 R 257310 CDS NP_889857.1 33602297 2660497 complement(3550843..3551586) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2176; inner membrane protein 3551586 2660497 BB3322 Bordetella bronchiseptica RB50 inner membrane protein NP_889857.1 3550843 R 257310 CDS NP_889858.1 33602298 2660465 complement(3551682..3551921) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2175; inner membrane protein 3551921 2660465 BB3323 Bordetella bronchiseptica RB50 inner membrane protein NP_889858.1 3551682 R 257310 CDS NP_889859.1 33602299 2658971 complement(3551935..3552144) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2174; lipoprotein 3552144 2658971 BB3324 Bordetella bronchiseptica RB50 lipoprotein NP_889859.1 3551935 R 257310 CDS NP_889860.1 33602300 2659292 complement(3552173..3553663) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2173; ferredoxin 3553663 2659292 BB3325 Bordetella bronchiseptica RB50 ferredoxin NP_889860.1 3552173 R 257310 CDS NP_889861.1 33602301 2660309 complement(3553755..3554693) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2172; cytochrome C oxidase subunit 3554693 2660309 BB3326 Bordetella bronchiseptica RB50 cytochrome C oxidase subunit NP_889861.1 3553755 R 257310 CDS NP_889862.1 33602302 2661430 complement(3554690..3554866) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2171; cytochrome C oxidase subunit 3554866 2661430 BB3327 Bordetella bronchiseptica RB50 cytochrome C oxidase subunit NP_889862.1 3554690 R 257310 CDS NP_889863.1 33602303 2661431 complement(3554869..3555531) 1 NC_002927.3 CcoO; FixO; cbb3-type cytochrome c oxidase subunit II 3555531 2661431 BB3328 Bordetella bronchiseptica RB50 cbb3-type cytochrome c oxidase subunit II NP_889863.1 3554869 R 257310 CDS NP_889864.1 33602304 2663767 complement(3555542..3557029) 1 NC_002927.3 CcoN; FixN; cbb3-type cytochrome c oxidase subunit I 3557029 2663767 BB3329 Bordetella bronchiseptica RB50 cbb3-type cytochrome c oxidase subunit I NP_889864.1 3555542 R 257310 CDS NP_889865.1 33602305 2661947 complement(3557154..3557297) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2168; outer membrane protein 3557297 2661947 BB3330 Bordetella bronchiseptica RB50 outer membrane protein NP_889865.1 3557154 R 257310 CDS NP_889866.1 33602306 2661401 complement(3557294..3558268) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2167; hypothetical protein 3558268 2661401 BB3331 Bordetella bronchiseptica RB50 hypothetical protein NP_889866.1 3557294 R 257310 CDS NP_889867.1 33602307 2661402 complement(3558333..3559607) 1 NC_002927.3 catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 3559607 bioA 2661402 bioA Bordetella bronchiseptica RB50 adenosylmethionine-8-amino-7-oxononanoate aminotransferase NP_889867.1 3558333 R 257310 CDS NP_889868.1 33602308 2661549 3559705..3560904 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2164; 8-amino-7-oxononanoate synthase 3560904 2661549 BB3333 Bordetella bronchiseptica RB50 8-amino-7-oxononanoate synthase NP_889868.1 3559705 D 257310 CDS NP_889869.1 33602309 2660307 3560901..3561554 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2163; hypothetical protein 3561554 2660307 BB3334 Bordetella bronchiseptica RB50 hypothetical protein NP_889869.1 3560901 D 257310 CDS NP_889870.1 33602310 2660809 3561551..3562987 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2162; biotin synthesis protein 3562987 2660809 BB3335 Bordetella bronchiseptica RB50 biotin synthesis protein NP_889870.1 3561551 D 257310 CDS NP_889871.1 33602311 2660810 3562975..3563334 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2161; integral membrane protein 3563334 2660810 BB3336 Bordetella bronchiseptica RB50 integral membrane protein NP_889871.1 3562975 D 257310 CDS NP_889872.1 33602312 2661044 3563327..3564070 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2160; hypothetical protein 3564070 2661044 BB3337 Bordetella bronchiseptica RB50 hypothetical protein NP_889872.1 3563327 D 257310 CDS NP_889873.1 33602313 2661045 complement(3564081..3564791) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2086; hypothetical protein 3564791 2661045 BB3338 Bordetella bronchiseptica RB50 hypothetical protein NP_889873.1 3564081 R 257310 CDS NP_889874.1 33602314 2660375 complement(3565251..3566573) 1 NC_002927.3 Catalyzes the first step in the glyoxalate cycle, which converts lipids to carbohydrates; isocitrate lyase 3566573 aceA 2660375 aceA Bordetella bronchiseptica RB50 isocitrate lyase NP_889874.1 3565251 R 257310 CDS NP_889875.2 161609267 2660959 3566892..3567713 1 NC_002927.3 catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 3567713 queF 2660959 queF Bordetella bronchiseptica RB50 7-cyano-7-deazaguanine reductase NP_889875.2 3566892 D 257310 CDS NP_889876.1 33602316 2661619 complement(3567720..3568973) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2083; transmembrane transport protein 3568973 2661619 BB3341 Bordetella bronchiseptica RB50 transmembrane transport protein NP_889876.1 3567720 R 257310 CDS NP_889877.1 33602317 2660709 complement(3569137..3569709) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2082; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 3569709 pgsA 2660709 pgsA Bordetella bronchiseptica RB50 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase NP_889877.1 3569137 R 257310 CDS NP_889878.1 33602318 2661340 complement(3569749..3571488) 1 NC_002927.3 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 3571488 uvrC 2661340 uvrC Bordetella bronchiseptica RB50 excinuclease ABC subunit C NP_889878.1 3569749 R 257310 CDS NP_889879.1 33602319 2661310 complement(3571541..3572602) 1 NC_002927.3 hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides; beta-hexosaminidase 3572602 nagZ 2661310 nagZ Bordetella bronchiseptica RB50 beta-hexosaminidase NP_889879.1 3571541 R 257310 CDS NP_889880.1 33602320 2661311 complement(3572641..3573102) 1 NC_002927.3 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 3573102 acpS 2661311 acpS Bordetella bronchiseptica RB50 4'-phosphopantetheinyl transferase NP_889880.1 3572641 R 257310 CDS NP_889881.1 33602321 2662217 complement(3573187..3573933) 1 NC_002927.3 involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 3573933 pdxJ 2662217 pdxJ Bordetella bronchiseptica RB50 pyridoxine 5'-phosphate synthase NP_889881.1 3573187 R 257310 CDS NP_889882.1 33602322 2662218 complement(3573930..3575429) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2077; efflux system outer membrane component 3575429 2662218 BB3347 Bordetella bronchiseptica RB50 efflux system outer membrane component NP_889882.1 3573930 R 257310 CDS NP_889883.1 33602323 2659998 complement(3575426..3578656) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2076; efflux system transmembrane protein 3578656 2659998 BB3348 Bordetella bronchiseptica RB50 efflux system transmembrane protein NP_889883.1 3575426 R 257310 CDS NP_889884.1 33602324 2658985 complement(3578723..3579967) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2075; efflux system inner membrane protein 3579967 2658985 BB3349 Bordetella bronchiseptica RB50 efflux system inner membrane protein NP_889884.1 3578723 R 257310 CDS NP_889885.1 33602325 2659072 complement(3580220..3580594) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2074; transcriptional regulator 3580594 2659072 BB3350 Bordetella bronchiseptica RB50 transcriptional regulator NP_889885.1 3580220 R 257310 CDS NP_889886.1 33602326 2661232 complement(3580697..3581875) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2073; hypothetical protein 3581875 2661232 BB3351 Bordetella bronchiseptica RB50 hypothetical protein NP_889886.1 3580697 R 257310 CDS NP_889887.1 33602327 2662025 3582588..3583394 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2071; molybdenum-binding protein 3583394 2662025 BB3353 Bordetella bronchiseptica RB50 molybdenum-binding protein NP_889887.1 3582588 D 257310 CDS NP_889888.1 33602328 2660398 complement(3583420..3584214) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2070; ABC transporter ATP-binding protein 3584214 2660398 BB3354 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_889888.1 3583420 R 257310 CDS NP_889889.1 33602329 2660677 complement(3584216..3585106) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2069; transmembrane component of ABC transporter 3585106 2660677 BB3355 Bordetella bronchiseptica RB50 transmembrane component of ABC transporter NP_889889.1 3584216 R 257310 CDS NP_889890.1 33602330 2660678 complement(3585216..3586190) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2068; hypothetical protein 3586190 2660678 BB3356 Bordetella bronchiseptica RB50 hypothetical protein NP_889890.1 3585216 R 257310 CDS NP_889891.1 33602331 2659965 complement(3586349..3586861) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2067; superoxide dismutase 3586861 2659965 BB3357 Bordetella bronchiseptica RB50 superoxide dismutase NP_889891.1 3586349 R 257310 CDS NP_889892.1 33602332 2661448 complement(3587018..3587989) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2066; hypothetical protein 3587989 2661448 BB3358 Bordetella bronchiseptica RB50 hypothetical protein NP_889892.1 3587018 R 257310 CDS NP_889893.1 33602333 2660335 complement(3588185..3589726) 1 NC_002927.3 catalyzes the formation of malonyl-CoA from malonate and CoA; malonyl-CoA synthase 3589726 2660335 BB3359 Bordetella bronchiseptica RB50 malonyl-CoA synthase NP_889893.1 3588185 R 257310 CDS NP_889894.1 33602334 2660996 complement(3589732..3590538) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2063; hypothetical protein 3590538 2660996 BB3360 Bordetella bronchiseptica RB50 hypothetical protein NP_889894.1 3589732 R 257310 CDS NP_889895.1 33602335 2660997 complement(3590535..3591671) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2062; malonyl-CoA decarboxylase 3591671 2660997 BB3361 Bordetella bronchiseptica RB50 malonyl-CoA decarboxylase NP_889895.1 3590535 R 257310 CDS NP_889896.1 33602336 2660357 complement(3591787..3592551) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2061; GntR family transcriptional regulator 3592551 2660357 BB3362 Bordetella bronchiseptica RB50 GntR family transcriptional regulator NP_889896.1 3591787 R 257310 CDS NP_889897.1 33602337 2660358 complement(3592665..3593471) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2060; hypothetical protein 3593471 2660358 BB3363 Bordetella bronchiseptica RB50 hypothetical protein NP_889897.1 3592665 R 257310 CDS NP_889898.1 33602338 2660359 complement(3593518..3594723) 1 NC_002927.3 catalyzes the formation of beta-ketovaleryl-CoA from acetyl-CoA and propionyl-CoA; beta-ketothiolase 3594723 2660359 BB3364 Bordetella bronchiseptica RB50 beta-ketothiolase NP_889898.1 3593518 R 257310 CDS NP_889899.1 33602339 2660999 complement(3594772..3595146) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2058; tautomerase 3595146 2660999 BB3365 Bordetella bronchiseptica RB50 tautomerase NP_889899.1 3594772 R 257310 CDS NP_889900.1 33602340 2661000 complement(3595247..3596509) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2057; ABC transporter ATP-binding protein 3596509 2661000 BB3366 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_889900.1 3595247 R 257310 CDS NP_889901.1 33602341 2660084 complement(3596506..3597363) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2056; binding-protein-dependent transport protein 3597363 2660084 BB3367 Bordetella bronchiseptica RB50 binding-protein-dependent transport protein NP_889901.1 3596506 R 257310 CDS NP_889902.1 33602342 2660061 complement(3597536..3598537) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2055; glycine/betaine ABC transporter substrate-binding protein 3598537 2660061 BB3368 Bordetella bronchiseptica RB50 glycine/betaine ABC transporter substrate-binding protein NP_889902.1 3597536 R 257310 CDS NP_889903.1 33602343 2663899 complement(3598989..3600254) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2053; cyclopropane-fatty-acyl-phospholipid synthase 3600254 2663899 BB3369 Bordetella bronchiseptica RB50 cyclopropane-fatty-acyl-phospholipid synthase NP_889903.1 3598989 R 257310 CDS NP_889904.1 33602344 2663900 3600441..3601607 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2052; transmembrane transport protein 3601607 2663900 BB3370 Bordetella bronchiseptica RB50 transmembrane transport protein NP_889904.1 3600441 D 257310 CDS NP_889905.1 33602345 2659120 3601977..3602213 1 NC_002927.3 required for 70S ribosome assembly; 50S ribosomal protein L28 3602213 rpmB 2659120 rpmB Bordetella bronchiseptica RB50 50S ribosomal protein L28 NP_889905.1 3601977 D 257310 CDS NP_889906.1 33602346 2659749 3602277..3602444 1 NC_002927.3 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 3602444 rpmG 2659749 rpmG Bordetella bronchiseptica RB50 50S ribosomal protein L33 NP_889906.1 3602277 D 257310 CDS NP_889907.1 33602347 2659750 complement(3602558..3604453) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2049; sulfate transporter 3604453 2659750 BB3373 Bordetella bronchiseptica RB50 sulfate transporter NP_889907.1 3602558 R 257310 CDS NP_889908.1 33602348 2663904 3604906..3605244 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) bph2; DNA-binding protein Bph2 3605244 bph2 2663904 bph2 Bordetella bronchiseptica RB50 DNA-binding protein Bph2 NP_889908.1 3604906 D 257310 CDS NP_889909.1 33602349 2661199 3605367..3605879 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2046; MarR family transcriptional regulator 3605879 2661199 BB3375 Bordetella bronchiseptica RB50 MarR family transcriptional regulator NP_889909.1 3605367 D 257310 CDS NP_889910.1 33602350 2661200 3605876..3607081 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2045; transmembrane transport protein 3607081 2661200 BB3376 Bordetella bronchiseptica RB50 transmembrane transport protein NP_889910.1 3605876 D 257310 CDS NP_889911.1 33602351 2659654 3607159..3609816 1 NC_002927.3 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 3609816 leuS 2659654 leuS Bordetella bronchiseptica RB50 leucyl-tRNA synthetase NP_889911.1 3607159 D 257310 CDS NP_889912.1 33602352 2662138 3609832..3610491 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2043; lipoprotein 3610491 2662138 BB3378 Bordetella bronchiseptica RB50 lipoprotein NP_889912.1 3609832 D 257310 CDS NP_889913.1 33602353 2659996 3610494..3611549 1 NC_002927.3 required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta 3611549 holA 2659996 holA Bordetella bronchiseptica RB50 DNA polymerase III subunit delta NP_889913.1 3610494 D 257310 CDS NP_889914.1 33602354 2659997 3611671..3612930 1 NC_002927.3 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 3612930 proA 2659997 proA Bordetella bronchiseptica RB50 gamma-glutamyl phosphate reductase NP_889914.1 3611671 D 257310 CDS NP_889915.1 33602355 2663920 3612927..3613322 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2040; hypothetical protein 3613322 2663920 BB3381 Bordetella bronchiseptica RB50 hypothetical protein NP_889915.1 3612927 D 257310 CDS NP_889916.1 33602356 2663921 complement(3613345..3614739) 1 NC_002927.3 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase 3614739 2663921 BB3382 Bordetella bronchiseptica RB50 amidase NP_889916.1 3613345 R 257310 CDS NP_889917.1 33602357 2662781 3614921..3615889 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2038; hydroxlacyl-CoA dehydrogenase 3615889 2662781 BB3383 Bordetella bronchiseptica RB50 hydroxlacyl-CoA dehydrogenase NP_889917.1 3614921 D 257310 CDS NP_889918.1 33602358 2662797 3615886..3616158 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2037; hypothetical protein 3616158 2662797 BB3384 Bordetella bronchiseptica RB50 hypothetical protein NP_889918.1 3615886 D 257310 CDS NP_889919.1 33602359 2662825 3616272..3616673 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2036; hypothetical protein 3616673 2662825 BB3385 Bordetella bronchiseptica RB50 hypothetical protein NP_889919.1 3616272 D 257310 CDS NP_889920.1 33602360 2662897 3623214..3624677 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2317; ribonuclease 3624677 2662897 BB3386 Bordetella bronchiseptica RB50 ribonuclease NP_889920.1 3623214 D 257310 CDS NP_889921.1 33602361 2663092 complement(3624711..3625613) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2318; dehydratase 3625613 2663092 BB3387 Bordetella bronchiseptica RB50 dehydratase NP_889921.1 3624711 R 257310 CDS NP_889922.1 33602362 2663093 complement(3625610..3626155) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2319; transcriptional regulator 3626155 2663093 BB3388 Bordetella bronchiseptica RB50 transcriptional regulator NP_889922.1 3625610 R 257310 CDS NP_889923.1 33602363 2663152 3626239..3627738 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2320; inner membrane efflux protein 3627738 2663152 BB3389 Bordetella bronchiseptica RB50 inner membrane efflux protein NP_889923.1 3626239 D 257310 CDS NP_889924.1 33602364 2663252 complement(3627711..3629486) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2321; ABC transporter 3629486 2663252 BB3390 Bordetella bronchiseptica RB50 ABC transporter NP_889924.1 3627711 R 257310 CDS NP_889925.1 33602365 2663459 3629598..3630563 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2322; heptosyltransferase II 3630563 waaF 2663459 waaF Bordetella bronchiseptica RB50 heptosyltransferase II NP_889925.1 3629598 D 257310 CDS NP_889926.1 33602366 2661877 3630576..3631340 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2323; hypothetical protein 3631340 2661877 BB3392 Bordetella bronchiseptica RB50 hypothetical protein NP_889926.1 3630576 D 257310 CDS NP_889927.1 33602367 2662614 3631345..3631617 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2324; hypothetical protein 3631617 2662614 BB3393 Bordetella bronchiseptica RB50 hypothetical protein NP_889927.1 3631345 D 257310 CDS NP_889928.1 33602368 2662615 complement(3631742..3632863) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2325; transferase 3632863 2662615 BB3394 Bordetella bronchiseptica RB50 transferase NP_889928.1 3631742 R 257310 CDS NP_889929.1 33602369 2659812 complement(3632871..3633596) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2326; polysaccharide deacetylase 3633596 2659812 BB3395 Bordetella bronchiseptica RB50 polysaccharide deacetylase NP_889929.1 3632871 R 257310 CDS NP_889930.1 33602370 2659813 3633961..3635577 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2327; outer membrane protein 3635577 2659813 BB3396 Bordetella bronchiseptica RB50 outer membrane protein NP_889930.1 3633961 D 257310 CDS NP_889931.1 33602371 2659977 complement(3635556..3636668) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2328; transferase 3636668 2659977 BB3397 Bordetella bronchiseptica RB50 transferase NP_889931.1 3635556 R 257310 CDS NP_889932.1 33602372 2659142 complement(3636665..3637417) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2329; transferase 3637417 2659142 BB3398 Bordetella bronchiseptica RB50 transferase NP_889932.1 3636665 R 257310 CDS NP_889933.1 33602373 2659239 complement(3637414..3638265) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2330; hypothetical protein 3638265 2659239 BB3399 Bordetella bronchiseptica RB50 hypothetical protein NP_889933.1 3637414 R 257310 CDS NP_889934.1 33602374 2661590 complement(3638258..3639361) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2331; transferase 3639361 2661590 BB3400 Bordetella bronchiseptica RB50 transferase NP_889934.1 3638258 R 257310 CDS NP_889935.1 33602375 2661591 complement(3639361..3642852) 1 NC_002927.3 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha 3642852 dnaE 2661591 dnaE Bordetella bronchiseptica RB50 DNA polymerase III subunit alpha NP_889935.1 3639361 R 257310 CDS NP_889936.1 33602376 2660503 3642963..3643889 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2333; dioxygenase 3643889 2660503 BB3402 Bordetella bronchiseptica RB50 dioxygenase NP_889936.1 3642963 D 257310 CDS NP_889937.1 33602377 2660604 complement(3644022..3647906) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2334; ATP-dependent helicase 3647906 2660604 BB3403 Bordetella bronchiseptica RB50 ATP-dependent helicase NP_889937.1 3644022 R 257310 CDS NP_889938.1 33602378 2660648 3649516..3649788 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2336; hypothetical protein 3649788 2660648 BB3405 Bordetella bronchiseptica RB50 hypothetical protein NP_889938.1 3649516 D 257310 CDS NP_889939.1 33602379 2660649 3649842..3651725 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2337; phospholipase 3651725 2660649 BB3406 Bordetella bronchiseptica RB50 phospholipase NP_889939.1 3649842 D 257310 CDS NP_889940.1 33602380 2660650 complement(3651739..3652518) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2338; transporter 3652518 2660650 BB3407 Bordetella bronchiseptica RB50 transporter NP_889940.1 3651739 R 257310 CDS NP_889941.1 33602381 2660963 complement(3652673..3653353) 1 NC_002927.3 Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A 3653353 rpiA 2660963 rpiA Bordetella bronchiseptica RB50 ribose-5-phosphate isomerase A NP_889941.1 3652673 R 257310 CDS NP_889942.1 33602382 2660964 complement(3653407..3655065) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2340; acyl-CoA dehydrogenase 3655065 2660964 BB3409 Bordetella bronchiseptica RB50 acyl-CoA dehydrogenase NP_889942.1 3653407 R 257310 CDS NP_889943.1 33602383 2660700 complement(3655145..3656560) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2341; lipoprotein 3656560 2660700 BB3410 Bordetella bronchiseptica RB50 lipoprotein NP_889943.1 3655145 R 257310 CDS NP_889944.1 33602384 2660701 3656638..3657345 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2342; hypothetical protein 3657345 2660701 BB3411 Bordetella bronchiseptica RB50 hypothetical protein NP_889944.1 3656638 D 257310 CDS NP_889945.1 33602385 2661351 complement(3657353..3658069) 1 NC_002927.3 responsible for recognizing base lesions in the genome and initiating base excision DNA repair; 3-methyladenine DNA glycosylase 3658069 2661351 BB3412 Bordetella bronchiseptica RB50 3-methyladenine DNA glycosylase NP_889945.1 3657353 R 257310 CDS NP_889946.1 33602386 2661352 complement(3658074..3658430) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2344; hypothetical protein 3658430 2661352 BB3413 Bordetella bronchiseptica RB50 hypothetical protein NP_889946.1 3658074 R 257310 CDS NP_889947.1 33602387 2659460 complement(3658427..3659236) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2345; inner membrane permease polyamine transport protein 3659236 2659460 BB3414 Bordetella bronchiseptica RB50 inner membrane permease polyamine transport protein NP_889947.1 3658427 R 257310 CDS NP_889948.1 33602388 2659897 complement(3659233..3660147) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2346; inner membrane permease polyamine transport protein 3660147 2659897 BB3415 Bordetella bronchiseptica RB50 inner membrane permease polyamine transport protein NP_889948.1 3659233 R 257310 CDS NP_889949.1 33602389 2659328 complement(3660144..3661271) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2347; polyamine transport ATP-binding protein 3661271 2659328 BB3416 Bordetella bronchiseptica RB50 polyamine transport ATP-binding protein NP_889949.1 3660144 R 257310 CDS NP_889950.1 33602390 2659224 complement(3661278..3662381) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2348; polyamine transport protein 3662381 2659224 BB3417 Bordetella bronchiseptica RB50 polyamine transport protein NP_889950.1 3661278 R 257310 CDS NP_889951.1 33602391 2659629 complement(3662513..3663247) 1 NC_002927.3 catalyzes the phosphorylation of 3-deoxy-D-manno-octulosonic acid at the 4-OH position; 3-deoxy-D-manno-octulosonic-acid kinase 3663247 2659629 BB3418 Bordetella bronchiseptica RB50 3-deoxy-D-manno-octulosonic-acid kinase NP_889951.1 3662513 R 257310 CDS NP_889952.1 33602392 2659630 complement(3663237..3663662) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2350; globin-like protein 3663662 2659630 BB3419 Bordetella bronchiseptica RB50 globin-like protein NP_889952.1 3663237 R 257310 CDS NP_889953.1 33602393 2659631 complement(3663662..3666193) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2351; inner membrane transport permease 3666193 2659631 BB3420 Bordetella bronchiseptica RB50 inner membrane transport permease NP_889953.1 3663662 R 257310 CDS NP_889954.1 33602394 2659041 3666308..3667282 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2352; C4-dicarboxylate ABC transporter substrate-binding protein 3667282 2659041 BB3421 Bordetella bronchiseptica RB50 C4-dicarboxylate ABC transporter substrate-binding protein NP_889954.1 3666308 D 257310 CDS NP_889955.1 33602395 2661290 3667368..3667868 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2353; inner membrane transport protein 3667868 2661290 BB3422 Bordetella bronchiseptica RB50 inner membrane transport protein NP_889955.1 3667368 D 257310 CDS NP_889956.1 33602396 2661291 3667909..3669186 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2354; inner membrane protein 3669186 2661291 BB3423 Bordetella bronchiseptica RB50 inner membrane protein NP_889956.1 3667909 D 257310 CDS NP_889957.1 33602397 2662190 3669326..3669958 1 NC_002927.3 fimbrial protein 3669958 2662190 BB3424 Bordetella bronchiseptica RB50 fimbrial protein NP_889957.1 3669326 D 257310 CDS NP_889958.1 33602398 2661301 3670074..3670700 1 NC_002927.3 fimbrial subunit protein 3670700 fimN 2661301 fimN Bordetella bronchiseptica RB50 fimbrial subunit protein NP_889958.1 3670074 D 257310 CDS NP_889959.1 33602399 2661489 3670933..3671538 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2674; fimbrial protein 3671538 fimX 2661489 fimX Bordetella bronchiseptica RB50 fimbrial protein NP_889959.1 3670933 D 257310 CDS NP_889960.1 33602400 2660831 complement(3671592..3672905) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2675; phenylacetate-coenzyme A ligase 3672905 paaK 2660831 paaK Bordetella bronchiseptica RB50 phenylacetate-coenzyme A ligase NP_889960.1 3671592 R 257310 CDS NP_889961.1 33602401 2660832 complement(3672980..3673450) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2676; phenylacetic acid degradation protein 3673450 paaI 2660832 paaI Bordetella bronchiseptica RB50 phenylacetic acid degradation protein NP_889961.1 3672980 R 257310 CDS NP_889962.1 33602402 2660492 complement(3673450..3674238) 1 NC_002927.3 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 3674238 paaG 2660492 paaG Bordetella bronchiseptica RB50 enoyl-CoA hydratase NP_889962.1 3673450 R 257310 CDS NP_889963.1 33602403 2660493 complement(3674249..3675913) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2678; oxidoreductase 3675913 2660493 BB3430 Bordetella bronchiseptica RB50 oxidoreductase NP_889963.1 3674249 R 257310 CDS NP_889964.1 33602404 2660722 complement(3675964..3677052) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2680; phenylacetic acid degradation NADH oxidoreductase 3677052 paaE 2660722 paaE Bordetella bronchiseptica RB50 phenylacetic acid degradation NADH oxidoreductase NP_889964.1 3675964 R 257310 CDS NP_889965.1 33602405 2660415 complement(3677064..3677570) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2681; phenylacetic acid degradation protein 3677570 paaD 2660415 paaD Bordetella bronchiseptica RB50 phenylacetic acid degradation protein NP_889965.1 3677064 R 257310 CDS NP_889966.1 33602406 2659863 complement(3677567..3678331) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2682; phenylacetic acid degradation protein 3678331 paaC 2659863 paaC Bordetella bronchiseptica RB50 phenylacetic acid degradation protein NP_889966.1 3677567 R 257310 CDS NP_889967.1 33602407 2659864 complement(3678347..3678631) 1 NC_002927.3 with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; involved in phenylacetate degradation; phenylacetate-CoA oxygenase subunit PaaB 3678631 paaB 2659864 paaB Bordetella bronchiseptica RB50 phenylacetate-CoA oxygenase subunit PaaB NP_889967.1 3678347 R 257310 CDS NP_889968.1 33602408 2659865 complement(3678696..3679685) 1 NC_002927.3 with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; phenylacetate-CoA oxygenase subunit PaaA 3679685 paaA 2659865 paaA Bordetella bronchiseptica RB50 phenylacetate-CoA oxygenase subunit PaaA NP_889968.1 3678696 R 257310 CDS NP_889969.1 33602409 2660575 3679857..3680786 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2685; phenylacetic acid degradation operon negative regulatory protein 3680786 paaX 2660575 paaX Bordetella bronchiseptica RB50 phenylacetic acid degradation operon negative regulatory protein NP_889969.1 3679857 D 257310 CDS NP_889970.1 33602410 2660576 complement(3680758..3681444) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2686; hypothetical protein 3681444 2660576 BB3437 Bordetella bronchiseptica RB50 hypothetical protein NP_889970.1 3680758 R 257310 CDS NP_889971.1 33602411 2660577 complement(3681478..3682023) 1 NC_002927.3 3'-5' exoribonuclease specific for small oligoribonuclotides; oligoribonuclease 3682023 2660577 BB3438 Bordetella bronchiseptica RB50 oligoribonuclease NP_889971.1 3681478 R 257310 CDS NP_889972.1 33602412 2660310 3682068..3683333 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2688; integral membrane zinc-metalloprotease 3683333 2660310 BB3439 Bordetella bronchiseptica RB50 integral membrane zinc-metalloprotease NP_889972.1 3682068 D 257310 CDS NP_889973.1 33602413 2660729 3683330..3684232 1 NC_002927.3 EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity; ribosome-associated GTPase 3684232 2660729 BB3440 Bordetella bronchiseptica RB50 ribosome-associated GTPase NP_889973.1 3683330 D 257310 CDS NP_889974.1 33602414 2659796 complement(3684409..3685563) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0977; oxidoreductase 3685563 2659796 BB3441 Bordetella bronchiseptica RB50 oxidoreductase NP_889974.1 3684409 R 257310 CDS NP_889975.1 33602415 2659797 complement(3685560..3686285) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0976; hypothetical protein 3686285 2659797 BB3442 Bordetella bronchiseptica RB50 hypothetical protein NP_889975.1 3685560 R 257310 CDS NP_889976.1 33602416 2661360 complement(3686694..3687074) 1 NC_002927.3 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 3687074 rplS 2661360 rplS Bordetella bronchiseptica RB50 50S ribosomal protein L19 NP_889976.1 3686694 R 257310 CDS NP_889977.1 33602417 2660408 3687382..3688254 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0974; hypothetical protein 3688254 2660408 BB3444 Bordetella bronchiseptica RB50 hypothetical protein NP_889977.1 3687382 D 257310 CDS NP_889978.1 33602418 2660479 complement(3688262..3688642) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0973; hypothetical protein 3688642 2660479 BB3445 Bordetella bronchiseptica RB50 hypothetical protein NP_889978.1 3688262 R 257310 CDS NP_889979.1 33602419 2660480 complement(3688796..3690070) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0972; hypothetical protein 3690070 2660480 BB3446 Bordetella bronchiseptica RB50 hypothetical protein NP_889979.1 3688796 R 257310 CDS NP_889980.1 33602420 2659663 complement(3690260..3691558) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0971; sulfate adenylyltransferase subunit 1 3691558 cysN 2659663 cysN Bordetella bronchiseptica RB50 sulfate adenylyltransferase subunit 1 NP_889980.1 3690260 R 257310 CDS NP_889981.1 33602421 2659010 complement(3691611..3692519) 1 NC_002927.3 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 3692519 cysD 2659010 cysD Bordetella bronchiseptica RB50 sulfate adenylyltransferase subunit 2 NP_889981.1 3691611 R 257310 CDS NP_889982.1 33602422 2659994 complement(3692569..3693321) 1 NC_002927.3 catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite; phosphoadenosine phosphosulfate reductase 3693321 cysH 2659994 cysH Bordetella bronchiseptica RB50 phosphoadenosine phosphosulfate reductase NP_889982.1 3692569 R 257310 CDS NP_889983.1 33602423 2659995 complement(3693318..3694382) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0969; sulfate transport ATP-binding protein 3694382 cysA 2659995 cysA Bordetella bronchiseptica RB50 sulfate transport ATP-binding protein NP_889983.1 3693318 R 257310 CDS NP_889984.1 33602424 2663744 complement(3694407..3695306) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0968; sulfate transport system permease 3695306 cysW 2663744 cysW Bordetella bronchiseptica RB50 sulfate transport system permease NP_889984.1 3694407 R 257310 CDS NP_889985.1 33602425 2662609 complement(3695303..3696178) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0967; sulfate transport system permease 3696178 cysU 2662609 cysU Bordetella bronchiseptica RB50 sulfate transport system permease NP_889985.1 3695303 R 257310 CDS NP_889986.1 33602426 2659839 complement(3696194..3697228) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0966; sulfate-binding protein precursor 3697228 sbp 2659839 sbp Bordetella bronchiseptica RB50 sulfate-binding protein precursor NP_889986.1 3696194 R 257310 CDS NP_889987.1 33602427 2660773 complement(3697418..3698059) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0965; antioxidant protein 3698059 2660773 BB3454 Bordetella bronchiseptica RB50 antioxidant protein NP_889987.1 3697418 R 257310 CDS NP_889988.1 33602428 2659418 complement(3698142..3699968) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0964; acyl-CoA dehydrogenase 3699968 2659418 BB3455 Bordetella bronchiseptica RB50 acyl-CoA dehydrogenase NP_889988.1 3698142 R 257310 CDS NP_889989.1 33602429 2659419 complement(3700231..3701160) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0962; electron transfer flavoprotein subunit alpha 3701160 etfA 2659419 etfA Bordetella bronchiseptica RB50 electron transfer flavoprotein subunit alpha NP_889989.1 3700231 R 257310 CDS NP_889990.1 33602430 2660500 complement(3701160..3701960) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0961; electron transfer flavoprotein subunit beta 3701960 etfB 2660500 etfB Bordetella bronchiseptica RB50 electron transfer flavoprotein subunit beta NP_889990.1 3701160 R 257310 CDS NP_889991.1 33602431 2660934 complement(3701981..3702895) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0960; histone deacetylase family protein 3702895 2660934 BB3458 Bordetella bronchiseptica RB50 histone deacetylase family protein NP_889991.1 3701981 R 257310 CDS NP_889992.1 33602432 2659900 3702915..3704060 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0959; membrane-bound lytic murein transglycosylase B precursor 3704060 mltB 2659900 mltB Bordetella bronchiseptica RB50 membrane-bound lytic murein transglycosylase B precursor NP_889992.1 3702915 D 257310 CDS NP_889993.1 33602433 2659901 complement(3704117..3705028) 1 NC_002927.3 catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; cysteine synthase B 3705028 cysM 2659901 cysM Bordetella bronchiseptica RB50 cysteine synthase B NP_889993.1 3704117 R 257310 CDS NP_889994.1 33602434 2660758 complement(3705109..3705693) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0956; hypothetical protein 3705693 2660758 BB3461 Bordetella bronchiseptica RB50 hypothetical protein NP_889994.1 3705109 R 257310 CDS NP_889995.1 33602435 2660759 complement(3705728..3706717) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0955; ADP-L-glycero-D-manno-heptose-6-epimerase 3706717 rfaD 2660759 rfaD Bordetella bronchiseptica RB50 ADP-L-glycero-D-manno-heptose-6-epimerase NP_889995.1 3705728 R 257310 CDS NP_889996.1 33602436 2660861 complement(3706714..3707655) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0954; ADP-heptose synthase 3707655 rfaE 2660861 rfaE Bordetella bronchiseptica RB50 ADP-heptose synthase NP_889996.1 3706714 R 257310 CDS NP_889997.1 33602437 2661566 complement(3707652..3708875) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0953; tetratricopeptide repeat protein 3708875 2661566 BB3464 Bordetella bronchiseptica RB50 tetratricopeptide repeat protein NP_889997.1 3707652 R 257310 CDS NP_889998.1 33602438 2661567 complement(3708918..3709232) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0952; hypothetical protein 3709232 2661567 BB3465 Bordetella bronchiseptica RB50 hypothetical protein NP_889998.1 3708918 R 257310 CDS NP_889999.1 33602439 2659878 complement(3709424..3709756) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0951; integration host factor beta-subunit 3709756 ihfB 2659878 ihfB Bordetella bronchiseptica RB50 integration host factor beta-subunit NP_889999.1 3709424 R 257310 CDS NP_890000.2 161609266 2659879 complement(3709785..3711500) 1 NC_002927.3 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 3711500 rpsA 2659879 rpsA Bordetella bronchiseptica RB50 30S ribosomal protein S1 NP_890000.2 3709785 R 257310 CDS NP_890001.1 33602441 2659232 complement(3711686..3712357) 1 NC_002927.3 Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase 3712357 cmk 2659232 cmk Bordetella bronchiseptica RB50 cytidylate kinase NP_890001.1 3711686 R 257310 CDS NP_890002.1 33602442 2659145 complement(3712372..3713700) 1 NC_002927.3 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 3713700 aroA 2659145 aroA Bordetella bronchiseptica RB50 3-phosphoshikimate 1-carboxyvinyltransferase NP_890002.1 3712372 R 257310 CDS NP_890003.1 33602443 2663955 complement(3713697..3714596) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0947; prephenate dehydrogenase 3714596 tyrA 2663955 tyrA Bordetella bronchiseptica RB50 prephenate dehydrogenase NP_890003.1 3713697 R 257310 CDS NP_890004.1 33602444 2662017 complement(3714683..3715768) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0946; bifunctional chorismate mutase/prephenate dehydratase 3715768 pheA 2662017 pheA Bordetella bronchiseptica RB50 bifunctional chorismate mutase/prephenate dehydratase NP_890004.1 3714683 R 257310 CDS NP_890005.1 33602445 2661959 complement(3715761..3716894) 1 NC_002927.3 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase 3716894 serC 2661959 serC Bordetella bronchiseptica RB50 phosphoserine aminotransferase NP_890005.1 3715761 R 257310 CDS NP_890006.2 161609265 2661265 complement(3716894..3719575) 1 NC_002927.3 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 3719575 gyrA 2661265 gyrA Bordetella bronchiseptica RB50 DNA gyrase subunit A NP_890006.2 3716894 R 257310 CDS NP_890007.1 33602447 2661266 3719946..3720527 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0943; outer membrane protein A precursor 3720527 ompA 2661266 ompA Bordetella bronchiseptica RB50 outer membrane protein A precursor NP_890007.1 3719946 D 257310 CDS NP_890008.1 33602448 2659053 3720605..3721378 1 NC_002927.3 Involved in ubiquinone biosynthesis; 3-demethylubiquinone-9 3-methyltransferase 3721378 ubiG 2659053 ubiG Bordetella bronchiseptica RB50 3-demethylubiquinone-9 3-methyltransferase NP_890008.1 3720605 D 257310 CDS NP_890009.1 33602449 2659054 3721375..3722052 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0941; phosphoglycolate phosphatase 3722052 2659054 BB3476 Bordetella bronchiseptica RB50 phosphoglycolate phosphatase NP_890009.1 3721375 D 257310 CDS NP_890010.1 33602450 2659056 3722269..3723453 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0940; sugar efflux transporter 3723453 2659056 BB3477 Bordetella bronchiseptica RB50 sugar efflux transporter NP_890010.1 3722269 D 257310 CDS NP_890011.1 33602451 2661879 3724033..3724701 1 NC_002927.3 Similar to Bacteriophage SPBc2 YoqW protein yoqW SWALL:O64131 (EMBL:AF020713) (224 aa) fasta scores: E(): 1.4e-08, 28.07% id in 228 aa, and to Salmonella typhimurium LT2 gifsy-2 prophage protein stm1053 SWALL:Q8ZQ78 (EMBL:AE008743) (208 aa) fasta scores: E(): 1.8e-16, 37.91% id in 182 aa; hypothetical protein 3724701 2661879 BB3478 Bordetella bronchiseptica RB50 hypothetical protein NP_890011.1 3724033 D 257310 CDS NP_890012.1 33602452 2659435 3724748..3725041 1 NC_002927.3 no significant database matches; hypothetical protein 3725041 2659435 BB3479 Bordetella bronchiseptica RB50 hypothetical protein NP_890012.1 3724748 D 257310 CDS NP_890013.1 33602453 2659436 complement(3725058..3725672) 1 NC_002927.3 no significant database matches; hypothetical protein 3725672 2659436 BB3480 Bordetella bronchiseptica RB50 hypothetical protein NP_890013.1 3725058 R 257310 CDS NP_890014.1 33602454 2660562 complement(3725700..3726161) 1 NC_002927.3 no significant database matches; hypothetical protein 3726161 2660562 BB3481 Bordetella bronchiseptica RB50 hypothetical protein NP_890014.1 3725700 R 257310 CDS NP_890015.1 33602455 2660563 complement(3726158..3726712) 1 NC_002927.3 Similar to Bacteriophage H19B lysozyme R SWALL:LYCV_BPH19 (SWALL:Q9ZXB7) (177 aa) fasta scores: E(): 0.011, 28.41% id in 183 aa, and to Escherichia coli O157:H7 lysozyme r of prophage cp-933r z2371 or ecs2741 SWALL:Q8X4U1 (EMBL:AE005369) (177 aa) fasta scores: E(): 0.012, 28.41% id in 183 aa; phage lysozyme 3726712 2660563 BB3482 Bordetella bronchiseptica RB50 phage lysozyme NP_890015.1 3726158 R 257310 CDS NP_890016.1 33602456 2660564 complement(3726691..3726933) 1 NC_002927.3 Similar to Serratia marcescens phage-holin analog protein regA SWALL:Q54422 (EMBL:U31763) (88 aa) fasta scores: E(): 1.2, 30.13% id in 73 aa, and to Serratia marcescens extracellular secretory protein nucE SWALL:Q54418 (EMBL:U11698) (89 aa) fasta scores: E(): 1.2, 30.3% id in 66 aa; hypothetical protein 3726933 2660564 BB3482A Bordetella bronchiseptica RB50 hypothetical protein NP_890016.1 3726691 R 257310 CDS NP_890017.1 33602457 2660565 complement(3726938..3727750) 1 NC_002927.3 no significant database matches; hypothetical protein 3727750 2660565 BB3483 Bordetella bronchiseptica RB50 hypothetical protein NP_890017.1 3726938 R 257310 CDS NP_890018.1 33602458 2660881 complement(3727750..3728013) 1 NC_002927.3 no significant database matches; hypothetical protein 3728013 2660881 BB3484 Bordetella bronchiseptica RB50 hypothetical protein NP_890018.1 3727750 R 257310 CDS NP_890019.1 33602459 2660882 complement(3728232..3728648) 1 NC_002927.3 no significant database matches; hypothetical protein 3728648 2660882 BB3485 Bordetella bronchiseptica RB50 hypothetical protein NP_890019.1 3728232 R 257310 CDS NP_890020.1 33602460 2660883 complement(3728653..3732609) 1 NC_002927.3 Weakly similar to Bacteriophage D3 Orf26 orf26 SWALL:Q9MC95 (EMBL:AF165214) (909 aa) fasta scores: E(): 4.8e-23, 25.98% id in 689 aa; hypothetical protein 3732609 2660883 BB3486 Bordetella bronchiseptica RB50 hypothetical protein NP_890020.1 3728653 R 257310 CDS NP_890021.1 33602461 2660949 complement(3732602..3732991) 1 NC_002927.3 Similar to Bacteriophage D3 Orf25 SWALL:Q9MC96 (EMBL:AF165214) (135 aa) fasta scores: E(): 0.00047, 30.46% id in 128 aa; hypothetical protein 3732991 2660949 BB3487 Bordetella bronchiseptica RB50 hypothetical protein NP_890021.1 3732602 R 257310 CDS NP_890022.1 33602462 2660950 complement(3732988..3733581) 1 NC_002927.3 Similar to Bacteriophage D3 Orf22 SWALL:Q9MC99 (EMBL:AF165214) (163 aa) fasta scores: E(): 0.091, 25.43% id in 173 aa; hypothetical protein 3733581 2660950 BB3488 Bordetella bronchiseptica RB50 hypothetical protein NP_890022.1 3732988 R 257310 CDS NP_890023.1 33602463 2660951 complement(3733588..3733947) 1 NC_002927.3 Similar to Bacteriophage D3 Orf21 SWALL:Q9MCA0 (EMBL:AF165214) (159 aa) fasta scores: E(): 0.00045, 31.37% id in 102 aa; hypothetical protein 3733947 2660951 BB3489 Bordetella bronchiseptica RB50 hypothetical protein NP_890023.1 3733588 R 257310 CDS NP_890024.1 33602464 2660952 complement(3733957..3736557) 1 NC_002927.3 Similar to Ralstonia solanacearum probable phage hk97 tail length tape measure-related protein rsc1690 or rs04085 SWALL:Q8XYR8 (EMBL:AL646065) (957 aa) fasta scores: E(): 1.4e-47, 35.26% id in 913 aa, and to Bacteriophage N15 gp16 gene 16 SWALL:O64330 (EMBL:AF064539) (838 aa) fasta scores: E(): 1.2e-28, 28.1% id in 861 aa; phage hk97 tail length tape measure-related protein 3736557 2660952 BB3490 Bordetella bronchiseptica RB50 phage hk97 tail length tape measure-related protein NP_890024.1 3733957 R 257310 CDS NP_890025.1 33602465 2660695 complement(3736585..3736875) 1 NC_002927.3 Similar to Yersinia pestis hypothetical phage protein Ypo2118 SWALL:Q8ZEP2 (EMBL:AJ414151) (73 aa) fasta scores: E(): 1.3e-08, 52.05% id in 73 aa; hypothetical protein 3736875 2660695 BB3491 Bordetella bronchiseptica RB50 hypothetical protein NP_890025.1 3736585 R 257310 CDS NP_890026.1 33602466 2660696 complement(3736893..3737222) 1 NC_002927.3 Similar to Yersinia pestis hypothetical phage protein Ypo2117 SWALL:Q8ZEP3 (EMBL:AJ414151) (103 aa) fasta scores: E(): 2.7e-07, 36.79% id in 106 aa; hypothetical protein 3737222 2660696 BB3492 Bordetella bronchiseptica RB50 hypothetical protein NP_890026.1 3736893 R 257310 CDS NP_890027.1 33602467 2660697 complement(3737235..3737750) 1 NC_002927.3 Similar to Ralstonia solanacearum hypothetical protein rsc1689 or rs04083 SWALL:Q8XYR9 (EMBL:AL646065) (217 aa) fasta scores: E(): 4.3e-22, 41.07% id in 168 aa; hypothetical protein 3737750 2660697 BB3493 Bordetella bronchiseptica RB50 hypothetical protein NP_890027.1 3737235 R 257310 CDS NP_890028.1 33602468 2659604 complement(3738005..3738505) 1 NC_002927.3 Similar to Bacteriophage phiYeO3-12 1.45 protein 1.45 SWALL:Q9T140 (EMBL:AJ251805) (157 aa) fasta scores: E(): 2.6e-06, 36.06% id in 122 aa, and to Escherichia coli O157:H7 hypothetical protein z3935 z3935 or ecs3504 SWALL:Q8X989 (EMBL:AE005493) (201 aa) fasta scores: E(): 2.1e-14, 37.5% id in 144 aa; hypothetical protein 3738505 2659604 BB3494 Bordetella bronchiseptica RB50 hypothetical protein NP_890028.1 3738005 R 257310 CDS NP_890029.1 33602469 2659605 complement(3738513..3738935) 1 NC_002927.3 Similar to Yersinia pestis hypothetical phage protein Ypo2115 SWALL:Q8ZEP5 (EMBL:AJ414151) (135 aa) fasta scores: E(): 5.8e-10, 34.58% id in 133 aa, and to Rhizobium loti hypothetical protein Mlr8015 SWALL:Q984G5 (EMBL:AP003013) (137 aa) fasta scores: E(): 8.8e-06, 33.91% id in 115 aa; hypothetical protein 3738935 2659605 BB3495 Bordetella bronchiseptica RB50 hypothetical protein NP_890029.1 3738513 R 257310 CDS NP_890030.1 33602470 2659606 complement(3738932..3739330) 1 NC_002927.3 Similar to Yersinia pestis hypothetical phage protein Ypo2114 SWALL:Q8ZEP6 (EMBL:AJ414151) (194 aa) fasta scores: E(): 1.8e-08, 36.93% id in 111 aa; hypothetical protein 3739330 2659606 BB3496 Bordetella bronchiseptica RB50 hypothetical protein NP_890030.1 3738932 R 257310 CDS NP_890031.1 33602471 2659607 complement(3739327..3739722) 1 NC_002927.3 Similar to Rhizobium loti hypothetical protein Mlr8012 SWALL:Q984G8 (EMBL:AP003013) (130 aa) fasta scores: E(): 6.8, 26.82% id in 123 aa; hypothetical protein 3739722 2659607 BB3497 Bordetella bronchiseptica RB50 hypothetical protein NP_890031.1 3739327 R 257310 CDS NP_890032.1 33602472 2659608 complement(3739722..3739922) 1 NC_002927.3 no significant database matches; hypothetical protein 3739922 2659608 BB3498 Bordetella bronchiseptica RB50 hypothetical protein NP_890032.1 3739722 R 257310 CDS NP_890033.1 33602473 2661452 complement(3739924..3740406) 1 NC_002927.3 Similar to Yersinia pestis hypothetical phage protein Ypo2111 SWALL:Q8ZEP9 (EMBL:AJ414151) (176 aa) fasta scores: E(): 4.1, 26.94% id in 167 aa; hypothetical protein 3740406 2661452 BB3499 Bordetella bronchiseptica RB50 hypothetical protein NP_890033.1 3739924 R 257310 CDS NP_890034.1 33602474 2661453 complement(3740469..3740726) 1 NC_002927.3 no significant database matches; hypothetical protein 3740726 2661453 BB3500 Bordetella bronchiseptica RB50 hypothetical protein NP_890034.1 3740469 R 257310 CDS NP_890035.1 33602475 2661454 complement(3740736..3741704) 1 NC_002927.3 Similar to Yersinia pestis phage protein ypo2110 SWALL:Q8ZEQ0 (EMBL:AJ414151) (401 aa) fasta scores: E(): 1.1e-09, 27.98% id in 318 aa, and to Bacteriophage SPP1 coat protein 13 SWALL:Q38582 (EMBL:X89721) (324 aa) fasta scores: E(): 0.061, 25.75% id in 198 aa; hypothetical protein 3741704 2661454 BB3501 Bordetella bronchiseptica RB50 hypothetical protein NP_890035.1 3740736 R 257310 CDS NP_890036.1 33602476 2661455 complement(3741731..3742333) 1 NC_002927.3 no significant database matches; hypothetical protein 3742333 2661455 BB3502 Bordetella bronchiseptica RB50 hypothetical protein NP_890036.1 3741731 R 257310 CDS NP_890037.1 33602477 2661456 complement(3742457..3742705) 1 NC_002927.3 no significant database matches; hypothetical protein 3742705 2661456 BB3503 Bordetella bronchiseptica RB50 hypothetical protein NP_890037.1 3742457 R 257310 CDS NP_890038.1 33602478 2660332 complement(3742705..3743619) 1 NC_002927.3 Similar to Yersinia pestis hypothetical phage protein ypo2108 ypo2108 or y2207 SWALL:Q8ZEQ2 (EMBL:AJ414151) (370 aa) fasta scores: E(): 1.4e-40, 39.14% id in 350 aa; hypothetical protein 3743619 2660332 BB3504 Bordetella bronchiseptica RB50 hypothetical protein NP_890038.1 3742705 R 257310 CDS NP_890039.1 33602479 2660333 complement(3743648..3745066) 1 NC_002927.3 Similar to Bacteriophage MB78 60 kDa protein gp62 SWALL:Q9T0Q3 (EMBL:Y19202) (540 aa) fasta scores: E(): 2.1e-31, 31.2% id in 455 aa; hypothetical protein 3745066 2660333 BB3505 Bordetella bronchiseptica RB50 hypothetical protein NP_890039.1 3743648 R 257310 CDS NP_890040.1 33602480 2660334 complement(3745069..3746346) 1 NC_002927.3 Similar to Bacillus subtilis pbsx phage terminase large subunit xtmB SWALL:XTMB_BACSU (SWALL:P39786) (433 aa) fasta scores: E(): 0.2, 21.58% id in 417 aa, and to Yersinia pestis hypothetical 47.8 kDa protein y1030 or ypmt1.24C SWALL:O68741 (EMBL:AF074611) (418 aa) fasta scores: E(): 2.6e-17, 27.75% id in 436 aa; phage terminase 3746346 2660334 BB3506 Bordetella bronchiseptica RB50 phage terminase NP_890040.1 3745069 R 257310 CDS NP_890041.1 33602481 2660627 complement(3746333..3746704) 1 NC_002927.3 Similar to Lactobacillus delbrueckii DNA binding protein SWALL:Q8VN11 (EMBL:AJ421486) (112 aa) fasta scores: E(): 0.0039, 31.81% id in 88 aa; phage-related DNA binding protein 3746704 2660627 BB3507 Bordetella bronchiseptica RB50 phage-related DNA binding protein NP_890041.1 3746333 R 257310 CDS NP_890042.1 33602482 2660628 complement(3747023..3747463) 1 NC_002927.3 no significant database matches; hypothetical protein 3747463 2660628 BB3508 Bordetella bronchiseptica RB50 hypothetical protein NP_890042.1 3747023 R 257310 CDS NP_890043.1 33602483 2660629 complement(3747460..3747663) 1 NC_002927.3 no significant database matches; hypothetical protein 3747663 2660629 BB3508A Bordetella bronchiseptica RB50 hypothetical protein NP_890043.1 3747460 R 257310 CDS NP_890044.1 33602484 2660630 complement(3747660..3748343) 1 NC_002927.3 Similar to bacteriophage WO hypothetical 16.7 kDa protein gp11 SWALL:Q9JMN0 (EMBL:AB036666) (151 aa) fasta scores: E(): 1.7e-13, 36.61% id in 142 aa, and to Ralstonia solanacearum bacteriophage-related protein rsc3228 or rs02445 SWALL:Q8XUG0 (EMBL:AL646074) (154 aa) fasta scores: E(): 1.1e-21, 46.35% id in 151 aa; hypothetical protein 3748343 2660630 BB3509 Bordetella bronchiseptica RB50 hypothetical protein NP_890044.1 3747660 R 257310 CDS NP_890045.1 33602485 2660631 complement(3748340..3749281) 1 NC_002927.3 no significant database matches; hypothetical protein 3749281 2660631 BB3510 Bordetella bronchiseptica RB50 hypothetical protein NP_890045.1 3748340 R 257310 CDS NP_890046.1 33602486 2660725 complement(3749278..3749649) 1 NC_002927.3 no significant database matches; hypothetical protein 3749649 2660725 BB3511 Bordetella bronchiseptica RB50 hypothetical protein NP_890046.1 3749278 R 257310 CDS NP_890047.1 33602487 2660726 complement(3749646..3750470) 1 NC_002927.3 Similar to Salmonella typhi hypothetical protein Sty2063 sty2063 SWALL:Q8Z5Z8 (EMBL:AL627272) (262 aa) fasta scores: E(): 1.5e-07, 24.43% id in 266 aa, and to Escherichia coli O157:H7 hypothetical protein z2397 z2397 or ecs1944 SWALL:Q8X8R8 (EMBL:AE005370) (262 aa) fasta scores: E(): 1.7e-06, 25.46% id in 267 aa; hypothetical protein 3750470 2660726 BB3512 Bordetella bronchiseptica RB50 hypothetical protein NP_890047.1 3749646 R 257310 CDS NP_890048.1 33602488 2660727 complement(3750470..3750883) 1 NC_002927.3 Similar to Bacteriophage phiE125 gp63 63 SWALL:Q8W6N7 (EMBL:AF447491) (112 aa) fasta scores: E(): 9.3e-12, 45.09% id in 102 aa, and to Bacteriophage HK97 gp66 66 SWALL:Q9MCN9 (EMBL:AF069529) (96 aa) fasta scores: E(): 1.1, 30.76% id in 65 aa; hypothetical protein 3750883 2660727 BB3513 Bordetella bronchiseptica RB50 hypothetical protein NP_890048.1 3750470 R 257310 CDS NP_890049.1 33602489 2659446 complement(3750883..3751338) 1 NC_002927.3 Similar to Bacteriophage 933W hypothetical 17.4 kDa protein l0093 SWALL:Q9T207 (EMBL:AF125520) (148 aa) fasta scores: E(): 0.017, 27.33% id in 139 aa, and to Yersinia pestis phage protein ninb or ypo2089 SWALL:Q8ZER6 (EMBL:AJ414151) (142 aa) fasta scores: E(): 0.00066, 31.34% id in 134 aa; hypothetical protein 3751338 2659446 BB3514 Bordetella bronchiseptica RB50 hypothetical protein NP_890049.1 3750883 R 257310 CDS NP_890050.1 33602490 2659447 complement(3751338..3751649) 1 NC_002927.3 Similar to Bacteriophage D3 CII SWALL:Q37905 (EMBL:AF165214) (102 aa) fasta scores: E(): 0.077, 27.18% id in 103 aa, and to Salmonella typhimurium, and Salmonella typhi hypothetical 13.7 kDa protein stm2627 or stm1013 or sty1021 SWALL:O84891 (EMBL:AF001386) (124 aa) fasta scores: E(): 0.00011, 40.21% id in 92 aa; phage-related transcriptional regulator 3751649 2659447 BB3515 Bordetella bronchiseptica RB50 phage-related transcriptional regulator NP_890050.1 3751338 R 257310 CDS NP_890051.1 33602491 2659448 complement(3751654..3751926) 1 NC_002927.3 no significant database matches; hypothetical protein 3751926 2659448 BB3516 Bordetella bronchiseptica RB50 hypothetical protein NP_890051.1 3751654 R 257310 CDS NP_890052.1 33602492 2659449 complement(3751934..3752110) 1 NC_002927.3 no significant database matches; hypothetical protein 3752110 2659449 BB3517 Bordetella bronchiseptica RB50 hypothetical protein NP_890052.1 3751934 R 257310 CDS NP_890053.1 33602493 2660434 complement(3752094..3752318) 1 NC_002927.3 no significant database matches; hypothetical protein 3752318 2660434 BB3518 Bordetella bronchiseptica RB50 hypothetical protein NP_890053.1 3752094 R 257310 CDS NP_890054.1 33602494 2660435 complement(3752556..3752759) 1 NC_002927.3 no significant database matches; hypothetical protein 3752759 2660435 BB3519 Bordetella bronchiseptica RB50 hypothetical protein NP_890054.1 3752556 R 257310 CDS NP_890055.1 33602495 2660436 complement(3752761..3753450) 1 NC_002927.3 no significant database matches; hypothetical protein 3753450 2660436 BB3520 Bordetella bronchiseptica RB50 hypothetical protein NP_890055.1 3752761 R 257310 CDS NP_890056.1 33602496 2661054 complement(3753443..3753655) 1 NC_002927.3 Similar to Bacteriophage P22 regulatory protein Cro SWALL:RCRO_BPP22 (SWALL:P09964) (61 aa) fasta scores: E(): 3, 34.04% id in 47 aa, and to Bacteriophage 21 Cro protein SWALL:Q9XJP6 (EMBL:AJ237660) (61 aa) fasta scores: E(): 2.5, 32.14% id in 56 aa; phage regulatory protein 3753655 cro 2661054 cro Bordetella bronchiseptica RB50 phage regulatory protein NP_890056.1 3753443 R 257310 CDS NP_890057.1 33602497 2661055 3753781..3754125 1 NC_002927.3 Similar to Bacteriophage 434 repressor protein CI SWALL:RPC1_BP434 (SWALL:P16117) (94 aa) fasta scores: E(): 4.6, 32.53% id in 83 aa, and to Streptococcus thermophilus hypothetical transcriptional regulator arp2 SWALL:Q935U1 (EMBL:AJ278471) (111 aa) fasta scores: E(): 0.053, 41.93% id in 62 aa; phage repressor 3754125 2661055 BB3522 Bordetella bronchiseptica RB50 phage repressor NP_890057.1 3753781 D 257310 CDS NP_890058.1 33602498 2659821 3754265..3754591 1 NC_002927.3 Similar to the N-terminal region of Neisseria meningitidis transcriptional regulator nmb0910 SWALL:Q9JZT1 (EMBL:AE002442) (238 aa) fasta scores: E(): 0.0086, 34.92% id in 63 aa; hypothetical protein 3754591 2659821 BB3523 Bordetella bronchiseptica RB50 hypothetical protein NP_890058.1 3754265 D 257310 CDS NP_890059.1 33602499 2659822 3754683..3755126 1 NC_002927.3 no significant database matches; hypothetical protein 3755126 2659822 BB3524 Bordetella bronchiseptica RB50 hypothetical protein NP_890059.1 3754683 D 257310 CDS NP_890060.1 33602500 2659823 3755239..3755424 1 NC_002927.3 no significant database matches; hypothetical protein 3755424 2659823 BB3525 Bordetella bronchiseptica RB50 hypothetical protein NP_890060.1 3755239 D 257310 CDS NP_890061.1 33602501 2659824 3755704..3756123 1 NC_002927.3 no significant database matches; hypothetical protein 3756123 2659824 BB3526 Bordetella bronchiseptica RB50 hypothetical protein NP_890061.1 3755704 D 257310 CDS NP_890062.1 33602502 2659825 3756155..3756532 1 NC_002927.3 no significant database matches; hypothetical protein 3756532 2659825 BB3527 Bordetella bronchiseptica RB50 hypothetical protein NP_890062.1 3756155 D 257310 CDS NP_890063.1 33602503 2661485 3756529..3756633 1 NC_002927.3 no significant database matches; hypothetical protein 3756633 2661485 BB3528 Bordetella bronchiseptica RB50 hypothetical protein NP_890063.1 3756529 D 257310 CDS NP_890064.1 33602504 2661486 3756630..3756938 1 NC_002927.3 no significant database matches; hypothetical protein 3756938 2661486 BB3529 Bordetella bronchiseptica RB50 hypothetical protein NP_890064.1 3756630 D 257310 CDS NP_890065.1 33602505 2661487 3756935..3757387 1 NC_002927.3 no significant database matches; hypothetical protein 3757387 2661487 BB3530 Bordetella bronchiseptica RB50 hypothetical protein NP_890065.1 3756935 D 257310 CDS NP_890066.1 33602506 2659183 3757384..3757593 1 NC_002927.3 Similar to Caulobacter crescentus hypothetical protein Cc1139 cc1139 SWALL:Q9A955 (EMBL:AE005792) (57 aa) fasta scores: E(): 2.3, 36.36% id in 44 aa, and to Anabaena sp. hypothetical protein Asl3923 asl3923 SWALL:Q8YQB0 (EMBL:AP003594) (53 aa) fasta scores: E(): 1.8, 34.21% id in 38 aa; hypothetical protein 3757593 2659183 BB3531 Bordetella bronchiseptica RB50 hypothetical protein NP_890066.1 3757384 D 257310 CDS NP_890067.1 33602507 2659184 3757590..3757757 1 NC_002927.3 hypothetical protein 3757757 2659184 BB3532 Bordetella bronchiseptica RB50 hypothetical protein NP_890067.1 3757590 D 257310 CDS NP_890068.1 33602508 2659185 3757866..3758516 1 NC_002927.3 Similar to Bacteriophage HK620 hypothetical 25.6 kDa protein hkaL SWALL:Q9AZ29 (EMBL:AF335538) (226 aa) fasta scores: E(): 5.9e-44, 55.34% id in 215 aa; hypothetical protein 3758516 2659185 BB3533 Bordetella bronchiseptica RB50 hypothetical protein NP_890068.1 3757866 D 257310 CDS NP_890069.1 33602509 2660029 3758530..3759183 1 NC_002927.3 no significant database matches; hypothetical protein 3759183 2660029 BB3534 Bordetella bronchiseptica RB50 hypothetical protein NP_890069.1 3758530 D 257310 CDS NP_890070.1 33602510 2660030 3759192..3759698 1 NC_002927.3 Similar to Bacteriophage PSA gp46 protein SWALL:Q8W5W1 (EMBL:AJ312240) (159 aa) fasta scores: E(): 4.9e-08, 32.92% id in 164 aa, and to Staphylococcus aureus prophage phiPV83 orf 16 SWALL:Q9MBS3 (EMBL:AB044554) (159 aa) fasta scores: E(): 1.4e-08, 31.09% id in 164 aa; hypothetical protein 3759698 2660030 BB3535 Bordetella bronchiseptica RB50 hypothetical protein NP_890070.1 3759192 D 257310 CDS NP_890071.1 33602511 2660031 3759734..3759922 1 NC_002927.3 no significant database matches; hypothetical protein 3759922 2660031 BB3536 Bordetella bronchiseptica RB50 hypothetical protein NP_890071.1 3759734 D 257310 CDS NP_890072.1 33602512 2660032 3759962..3760267 1 NC_002927.3 no significant database matches; hypothetical protein 3760267 2660032 BB3537 Bordetella bronchiseptica RB50 hypothetical protein NP_890072.1 3759962 D 257310 CDS NP_890073.1 33602513 2659099 3760324..3761415 1 NC_002927.3 Similar to Streptomyces coelicolor hypothetical protein sco1532 sco1532 or scl2.22C SWALL:Q9L277 (EMBL:AL137778) (425 aa) fasta scores: E(): 0.16, 25.69% id in 358 aa; hypothetical protein 3761415 2659099 BB3538 Bordetella bronchiseptica RB50 hypothetical protein NP_890073.1 3760324 D 257310 CDS NP_890074.1 33602514 2659100 3761405..3761656 1 NC_002927.3 no significant database matches; hypothetical protein 3761656 2659100 BB3539 Bordetella bronchiseptica RB50 hypothetical protein NP_890074.1 3761405 D 257310 CDS NP_890075.1 33602515 2659101 3761649..3761897 1 NC_002927.3 Weakly similar to Xanthomonas axonopodis virulence regulator xrva or xac3256 SWALL:AAM38100 (EMBL:AE011971) (130 aa) fasta scores: E(): 10, 34.04% id in 47 aa; hypothetical protein 3761897 2659101 BB3540 Bordetella bronchiseptica RB50 hypothetical protein NP_890075.1 3761649 D 257310 CDS NP_890076.1 33602516 2659102 3761890..3762009 1 NC_002927.3 no significant database matches; hypothetical protein 3762009 2659102 BB3541 Bordetella bronchiseptica RB50 hypothetical protein NP_890076.1 3761890 D 257310 CDS NP_890077.1 33602517 2659103 3762010..3762264 1 NC_002927.3 Similar to Yersinia pestis phage excisionase ypo2087 SWALL:Q8ZER9 (EMBL:AJ414151) (86 aa) fasta scores: E(): 0.31, 33.33% id in 69 aa, and to Salmonella typhimurium, and Salmonella typhi gifsy-2 prophage, excisionase stm1006 or xis or sty1012 SWALL:Q8XGN6 (EMBL:AE008743) (82 aa) fasta scores: E(): 2.7, 30.98% id in 71 aa; phage excisionase 3762264 2659103 BB3542 Bordetella bronchiseptica RB50 phage excisionase NP_890077.1 3762010 D 257310 CDS NP_890078.1 33602518 2659004 3762261..3763484 1 NC_002927.3 Similar to Salmonella typhimurium gifsy-2 prophage, integrase stm1005 SWALL:Q8ZQB0 (EMBL:AE008743) (430 aa) fasta scores: E(): 5.8e-10, 29.01% id in 417 aa, and to Escherichia coli O157:H7 integrase within cp-933o, partial z2084 or ecs2217 SWALL:Q8XC61 (EMBL:AE005346) (183 aa) fasta scores: E(): 6.8e-09, 39.85% id in 138 aa; phage integrase 3763484 2659004 BB3543 Bordetella bronchiseptica RB50 phage integrase NP_890078.1 3762261 D 257310 CDS NP_890079.1 33602519 2659759 complement(3763665..3764576) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0936; LysR family transcriptional regulator 3764576 2659759 BB3544 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_890079.1 3763665 R 257310 CDS NP_890080.1 33602520 2661218 3764701..3765675 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0935; hypothetical protein 3765675 2661218 BB3545 Bordetella bronchiseptica RB50 hypothetical protein NP_890080.1 3764701 D 257310 CDS NP_890081.1 33602521 2661219 3765710..3766069 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0934; hypothetical protein 3766069 2661219 BB3546 Bordetella bronchiseptica RB50 hypothetical protein NP_890081.1 3765710 D 257310 CDS NP_890082.1 33602522 2662027 3766136..3767308 1 NC_002927.3 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 3767308 2662027 BB3547 Bordetella bronchiseptica RB50 acetyl-CoA acetyltransferase NP_890082.1 3766136 D 257310 CDS NP_890083.1 33602523 2662028 3767312..3767734 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0932; hypothetical protein 3767734 2662028 BB3548 Bordetella bronchiseptica RB50 hypothetical protein NP_890083.1 3767312 D 257310 CDS NP_890084.1 33602524 2662029 3767739..3768722 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0931; hypothetical protein 3768722 2662029 BB3549 Bordetella bronchiseptica RB50 hypothetical protein NP_890084.1 3767739 D 257310 CDS NP_890085.1 33602525 2662095 3768719..3770392 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0930; CoA ligase 3770392 2662095 BB3550 Bordetella bronchiseptica RB50 CoA ligase NP_890085.1 3768719 D 257310 CDS NP_890086.1 33602526 2659729 3770485..3771060 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0929; hypothetical protein 3771060 2659729 BB3551 Bordetella bronchiseptica RB50 hypothetical protein NP_890086.1 3770485 D 257310 CDS NP_890087.1 33602527 2659730 complement(3771085..3772074) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0928; LysR family transcriptional regulator 3772074 2659730 BB3552 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_890087.1 3771085 R 257310 CDS NP_890088.1 33602528 2659379 3772210..3773187 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0927; hypothetical protein 3773187 2659379 BB3553 Bordetella bronchiseptica RB50 hypothetical protein NP_890088.1 3772210 D 257310 CDS NP_890089.1 33602529 2659719 3773313..3774386 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0926; hypothetical protein 3774386 2659719 BB3554 Bordetella bronchiseptica RB50 hypothetical protein NP_890089.1 3773313 D 257310 CDS NP_890090.1 33602530 2659720 3774464..3775324 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0925; fumarylacetoacetate family hydrolase 3775324 2659720 BB3555 Bordetella bronchiseptica RB50 fumarylacetoacetate family hydrolase NP_890090.1 3774464 D 257310 CDS NP_890091.1 33602531 2659330 complement(3775376..3776272) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0924; transcriptional regulator 3776272 2659330 BB3556 Bordetella bronchiseptica RB50 transcriptional regulator NP_890091.1 3775376 R 257310 CDS NP_890092.1 33602532 2659331 complement(3776314..3777129) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0923; hypothetical protein 3777129 2659331 BB3557 Bordetella bronchiseptica RB50 hypothetical protein NP_890092.1 3776314 R 257310 CDS NP_890093.1 33602533 2662036 3777242..3778474 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0922; hypothetical protein 3778474 2662036 BB3558 Bordetella bronchiseptica RB50 hypothetical protein NP_890093.1 3777242 D 257310 CDS NP_890094.1 33602534 2662037 3778517..3779701 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0921; citrate utilization protein B 3779701 citB 2662037 citB Bordetella bronchiseptica RB50 citrate utilization protein B NP_890094.1 3778517 D 257310 CDS NP_890095.1 33602535 2660737 3779722..3781125 1 NC_002927.3 catalyzes the oxidation of tricarballylate to cis-aconitate; FAD-dependent; required for the utilization of tricarballylate as a carbon and energy source by S. enterica; tricarballylate dehydrogenase 3781125 2660737 BB3560 Bordetella bronchiseptica RB50 tricarballylate dehydrogenase NP_890095.1 3779722 D 257310 CDS NP_890096.1 33602536 2660738 complement(3781176..3782630) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0919; succinate-semialdehyde dehydrogenase 3782630 gabD 2660738 gabD Bordetella bronchiseptica RB50 succinate-semialdehyde dehydrogenase NP_890096.1 3781176 R 257310 CDS NP_890097.1 33602537 2660739 complement(3782735..3784147) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0918; hypothetical protein 3784147 2660739 BB3562 Bordetella bronchiseptica RB50 hypothetical protein NP_890097.1 3782735 R 257310 CDS NP_890098.1 33602538 2661354 complement(3784256..3785035) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0916; taurine ABC transporter ATP-binding protein 3785035 2661354 BB3563 Bordetella bronchiseptica RB50 taurine ABC transporter ATP-binding protein NP_890098.1 3784256 R 257310 CDS NP_890099.1 33602539 2661483 complement(3785059..3785886) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0915; inner membrane component of binding-protein-dependent transport system 3785886 2661483 BB3564 Bordetella bronchiseptica RB50 inner membrane component of binding-protein-dependent transport system NP_890099.1 3785059 R 257310 CDS NP_890100.1 33602540 2659894 complement(3785883..3786755) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0914; inner membrane component of binding-protein-dependent transport system 3786755 2659894 BB3565 Bordetella bronchiseptica RB50 inner membrane component of binding-protein-dependent transport system NP_890100.1 3785883 R 257310 CDS NP_890101.1 33602541 2660987 complement(3786775..3787749) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0913; hypothetical protein 3787749 2660987 BB3566 Bordetella bronchiseptica RB50 hypothetical protein NP_890101.1 3786775 R 257310 CDS NP_890102.1 33602542 2660988 complement(3787854..3788855) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0912; LysR family transcriptional regulator 3788855 2660988 BB3567 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_890102.1 3787854 R 257310 CDS NP_890103.1 33602543 2659619 3789029..3789580 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0911; decarboxylase 3789580 2659619 BB3568 Bordetella bronchiseptica RB50 decarboxylase NP_890103.1 3789029 D 257310 CDS NP_890104.1 33602544 2659665 3789593..3790201 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0910A; hypothetical protein 3790201 2659665 BB3569 Bordetella bronchiseptica RB50 hypothetical protein NP_890104.1 3789593 D 257310 CDS NP_890105.1 33602545 2659666 3790228..3791427 1 NC_002927.3 aspartate aminotransferase 3791427 2659666 BB3570 Bordetella bronchiseptica RB50 aspartate aminotransferase NP_890105.1 3790228 D 257310 CDS NP_890106.1 33602546 2659158 3791424..3793559 1 NC_002927.3 hydantoinase A 3793559 2659158 BB3571 Bordetella bronchiseptica RB50 hydantoinase A NP_890106.1 3791424 D 257310 CDS NP_890107.1 33602547 2659087 3793556..3795217 1 NC_002927.3 hydantoinase B 3795217 2659087 BB3572 Bordetella bronchiseptica RB50 hydantoinase B NP_890107.1 3793556 D 257310 CDS NP_890108.1 33602548 2659088 3795288..3796268 1 NC_002927.3 hypothetical protein 3796268 2659088 BB3573 Bordetella bronchiseptica RB50 hypothetical protein NP_890108.1 3795288 D 257310 CDS NP_890109.1 33602549 2661216 3796265..3797122 1 NC_002927.3 nitroreductase 3797122 2661216 BB3574 Bordetella bronchiseptica RB50 nitroreductase NP_890109.1 3796265 D 257310 CDS NP_890110.1 33602550 2661217 3797196..3798566 1 NC_002927.3 efflux protein 3798566 2661217 BB3575 Bordetella bronchiseptica RB50 efflux protein NP_890110.1 3797196 D 257310 CDS NP_890111.1 33602551 2661253 complement(3798678..3800300) 1 NC_002927.3 hypothetical protein 3800300 2661253 BB3576 Bordetella bronchiseptica RB50 hypothetical protein NP_890111.1 3798678 R 257310 CDS NP_890112.1 33602552 2661811 3800436..3801290 1 NC_002927.3 hypothetical protein 3801290 2661811 BB3577 Bordetella bronchiseptica RB50 hypothetical protein NP_890112.1 3800436 D 257310 CDS NP_890113.1 33602553 2661812 complement(3801299..3801739) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1747; hypothetical protein 3801739 2661812 BB3578 Bordetella bronchiseptica RB50 hypothetical protein NP_890113.1 3801299 R 257310 CDS NP_890114.1 33602554 2662195 complement(3801868..3803097) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1746; peptidoglycan-binding protein 3803097 2662195 BB3579 Bordetella bronchiseptica RB50 peptidoglycan-binding protein NP_890114.1 3801868 R 257310 CDS NP_890115.1 33602555 2662196 complement(3803136..3803951) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1745; hypothetical protein 3803951 2662196 BB3580 Bordetella bronchiseptica RB50 hypothetical protein NP_890115.1 3803136 R 257310 CDS NP_890116.1 33602556 2662197 3804005..3805156 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1744; hypothetical protein 3805156 2662197 BB3581 Bordetella bronchiseptica RB50 hypothetical protein NP_890116.1 3804005 D 257310 CDS NP_890117.1 33602557 2661971 complement(3805282..3805752) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1743; hypothetical protein 3805752 2661971 BB3582 Bordetella bronchiseptica RB50 hypothetical protein NP_890117.1 3805282 R 257310 CDS NP_890118.1 33602558 2661972 complement(3805767..3808055) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1741; ABC transporter 3808055 2661972 BB3583 Bordetella bronchiseptica RB50 ABC transporter NP_890118.1 3805767 R 257310 CDS NP_890119.1 33602559 2662715 3808296..3810935 1 NC_002927.3 catalyze the formation of cyanophycin which may act to store excess nitrogen; cyanophycin synthetase 3810935 cphA 2662715 cphA Bordetella bronchiseptica RB50 cyanophycin synthetase NP_890119.1 3808296 D 257310 CDS NP_890120.1 33602560 2662716 3811006..3813579 1 NC_002927.3 catalyze the formation of cyanophycin which may act to store excess nitrogen; cyanophycin synthetase 3813579 cphA 2662716 cphA Bordetella bronchiseptica RB50 cyanophycin synthetase NP_890120.1 3811006 D 257310 CDS NP_890121.1 33602561 2661509 3813844..3814044 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1738; hypothetical protein 3814044 2661509 BB3586 Bordetella bronchiseptica RB50 hypothetical protein NP_890121.1 3813844 D 257310 CDS NP_890122.1 33602562 2661510 3814076..3814237 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1737; hypothetical protein 3814237 2661510 BB3587 Bordetella bronchiseptica RB50 hypothetical protein NP_890122.1 3814076 D 257310 CDS NP_890123.1 33602563 2661511 3814295..3814633 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1736; hypothetical protein 3814633 2661511 BB3588 Bordetella bronchiseptica RB50 hypothetical protein NP_890123.1 3814295 D 257310 CDS NP_890124.1 33602564 2659868 complement(3814781..3815662) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1156; hypothetical protein 3815662 2659868 BB3589 Bordetella bronchiseptica RB50 hypothetical protein NP_890124.1 3814781 R 257310 CDS NP_890125.1 33602565 2659869 complement(3815740..3817119) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1155; regulatory protein 3817119 2659869 BB3590 Bordetella bronchiseptica RB50 regulatory protein NP_890125.1 3815740 R 257310 CDS NP_890126.1 33602566 2660827 complement(3817158..3818003) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1154; hypothetical protein 3818003 2660827 BB3591 Bordetella bronchiseptica RB50 hypothetical protein NP_890126.1 3817158 R 257310 CDS NP_890127.1 33602567 2660828 complement(3818019..3818363) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1153; hypothetical protein 3818363 2660828 BB3592 Bordetella bronchiseptica RB50 hypothetical protein NP_890127.1 3818019 R 257310 CDS NP_890128.1 33602568 2660967 complement(3818366..3818902) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1152; hypothetical protein 3818902 2660967 BB3593 Bordetella bronchiseptica RB50 hypothetical protein NP_890128.1 3818366 R 257310 CDS NP_890129.1 33602569 2660968 complement(3819074..3819649) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1151; hypothetical protein 3819649 2660968 BB3594 Bordetella bronchiseptica RB50 hypothetical protein NP_890129.1 3819074 R 257310 CDS NP_890130.1 33602570 2660969 complement(3819752..3820489) 1 NC_002927.3 catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 3820489 fabG 2660969 fabG Bordetella bronchiseptica RB50 3-ketoacyl-ACP reductase NP_890130.1 3819752 R 257310 CDS NP_890131.1 33602571 2660471 complement(3820557..3822194) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1149; poly-beta-hydroxybutyrate polymerase 3822194 phbC 2660471 phbC Bordetella bronchiseptica RB50 poly-beta-hydroxybutyrate polymerase NP_890131.1 3820557 R 257310 CDS NP_890132.1 33602572 2660421 complement(3822302..3823057) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1148; hypothetical protein 3823057 2660421 BB3597 Bordetella bronchiseptica RB50 hypothetical protein NP_890132.1 3822302 R 257310 CDS NP_890133.1 33602573 2660422 complement(3823045..3824007) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1147; ribosomal large subunit pseudouridine synthase D 3824007 rluD 2660422 rluD Bordetella bronchiseptica RB50 ribosomal large subunit pseudouridine synthase D NP_890133.1 3823045 R 257310 CDS NP_890134.1 33602574 2659893 3824109..3824909 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1146; competence lipoprotein precursor 3824909 comL 2659893 comL Bordetella bronchiseptica RB50 competence lipoprotein precursor NP_890134.1 3824109 D 257310 CDS NP_890135.1 33602575 2660641 complement(3824971..3827046) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1145; ATP-dependent helicase 3827046 2660641 BB3600 Bordetella bronchiseptica RB50 ATP-dependent helicase NP_890135.1 3824971 R 257310 CDS NP_890136.1 33602576 2658958 3827211..3829586 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1144; transcription accessory protein 3829586 tex 2658958 tex Bordetella bronchiseptica RB50 transcription accessory protein NP_890136.1 3827211 D 257310 CDS NP_890137.1 33602577 2658959 complement(3829667..3831022) 1 NC_002927.3 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 3831022 trpS 2658959 trpS Bordetella bronchiseptica RB50 tryptophanyl-tRNA synthetase NP_890137.1 3829667 R 257310 CDS NP_890138.1 33602578 2659219 complement(3831082..3831408) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1141; iron uptake protein 3831408 2659219 BB3603 Bordetella bronchiseptica RB50 iron uptake protein NP_890138.1 3831082 R 257310 CDS NP_890139.1 33602579 2659220 complement(3831413..3833047) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1140; iron uptake protein 3833047 2659220 BB3604 Bordetella bronchiseptica RB50 iron uptake protein NP_890139.1 3831413 R 257310 CDS NP_890140.1 33602580 2662008 complement(3833044..3833352) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1139; iron uptake protein 3833352 2662008 BB3605 Bordetella bronchiseptica RB50 iron uptake protein NP_890140.1 3833044 R 257310 CDS NP_890141.1 33602581 2659773 3833598..3834599 1 NC_002927.3 Similar to Escherichia coli shufflon-specific DNA recombinase rcI SWALL:RCI1_ECOLI (SWALL:P10487) (384 aa) fasta scores: E(): 8.4e-10, 37.03% id in 324 aa, and to Xanthomonas axonopodis shufflon-specific recombinase rci or xac2418 SWALL:AAM37269 (EMBL:AE011879) (315 aa) fasta scores: E(): 2.1e-51, 48.88% id in 313 aa; shufflon-specific DNA recombinase 3834599 2659773 BB3606 Bordetella bronchiseptica RB50 shufflon-specific DNA recombinase NP_890141.1 3833598 D 257310 CDS NP_890142.1 33602582 2661794 complement(3834602..3835393) 1 NC_002927.3 Similar to Chlorella virus NC-1A modification methylase cvibi cvibiM SWALL:MTC1_CHVN1 (SWALL:Q01511) (260 aa) fasta scores: E(): 3.4e-13, 28.84% id in 260 aa, and to Bacteriophage phiE125 gp27 27 SWALL:Q8W6S4 (EMBL:AF447491) (262 aa) fasta scores: E(): 3.5e-81, 68.82% id in 263 aa; modification methylase 3835393 2661794 BB3607 Bordetella bronchiseptica RB50 modification methylase NP_890142.1 3834602 R 257310 CDS NP_890143.1 33602583 2661795 complement(3835568..3835921) 1 NC_002927.3 Similar to Ralstonia solanacearum tail fiber assembly-like protein rsc1920 or rs03489 SWALL:Q8XY43 (EMBL:AL646067) (250 aa) fasta scores: E(): 2.8, 29.8% id in 104 aa, and to Yersinia pestis lambda tail fiber assembly protein g y1053 or ypmt1.03C SWALL:O68721 (EMBL:AF074611) (202 aa) fasta scores: E(): 0.6, 29.12% id in 103 aa; tail fiber assembly protein 3835921 2661795 BB3608 Bordetella bronchiseptica RB50 tail fiber assembly protein NP_890143.1 3835568 R 257310 CDS NP_890144.1 33602584 2662151 complement(3835918..3836172) 1 NC_002927.3 no significant database matches; hypothetical protein 3836172 2662151 BB3609 Bordetella bronchiseptica RB50 hypothetical protein NP_890144.1 3835918 R 257310 CDS NP_890145.1 33602585 2662152 complement(3836175..3836975) 1 NC_002927.3 Similar to Yersinia pestis bacteriophage tail fiber protein stf or ypo1252 SWALL:Q8ZGN4 (EMBL:AJ414147) (259 aa) fasta scores: E(): 0.013, 30% id in 140 aa; hypothetical protein 3836975 2662152 BB3610 Bordetella bronchiseptica RB50 hypothetical protein NP_890145.1 3836175 R 257310 CDS NP_890146.1 33602586 2662153 complement(3836972..3837550) 1 NC_002927.3 Similar to Bacteriophage SfV tail protein orf20 SWALL:O22003 (EMBL:U82619) (194 aa) fasta scores: E(): 1.3e-08, 30.3% id in 198 aa, and to Neisseria meningitidis hypothetical protein Nma1324 nma1324 SWALL:Q9JUG4 (EMBL:AL162755) (186 aa) fasta scores: E(): 2.3e-26, 43.85% id in 187 aa; phage tail protein 3837550 2662153 BB3611 Bordetella bronchiseptica RB50 phage tail protein NP_890146.1 3836972 R 257310 CDS NP_890147.1 33602587 2662154 complement(3837547..3838617) 1 NC_002927.3 Similar to Bacteriophage SfV tail protein orf19 SWALL:Q8SBG4 (EMBL:U82619) (352 aa) fasta scores: E(): 4.5e-16, 30.44% id in 335 aa, and to Neisseria meningitidis hypothetical protein Nma1323 nma1323 SWALL:Q9JUG5 (EMBL:AL162755) (351 aa) fasta scores: E(): 4.4e-55, 47.14% id in 350 aa; phage tail protein 3838617 2662154 BB3612 Bordetella bronchiseptica RB50 phage tail protein NP_890147.1 3837547 R 257310 CDS NP_890148.1 33602588 2661074 complement(3838614..3838964) 1 NC_002927.3 Similar to Neisseria meningitidis hypothetical protein Nma1322 nma1322 SWALL:Q9JUG6 (EMBL:AL162755) (115 aa) fasta scores: E(): 8.8e-20, 54.31% id in 116 aa, and to Haemophilus influenzae mu-like prophage flumu protein gp46 hi1519 SWALL:VG46_HAEIN (SWALL:P44239) (135 aa) fasta scores: E(): 0.02, 36% id in 100 aa; hypothetical protein 3838964 2661074 BB3613 Bordetella bronchiseptica RB50 hypothetical protein NP_890148.1 3838614 R 257310 CDS NP_890149.1 33602589 2661075 complement(3839028..3839669) 1 NC_002927.3 Similar to Neisseria meningitidis hypothetical protein nma1321 nma1321 or nmb1111 SWALL:Q9JQQ9 (EMBL:AL162755) (222 aa) fasta scores: E(): 7.4e-29, 43.06% id in 209 aa, and to Bacteriophage Mu protein gp45 45 SWALL:VG45_BPMU (SWALL:Q9T1V4) (197 aa) fasta scores: E(): 3.9e-06, 30.37% id in 214 aa; hypothetical protein 3839669 2661075 BB3614 Bordetella bronchiseptica RB50 hypothetical protein NP_890149.1 3839028 R 257310 CDS NP_890150.1 33602590 2661076 complement(3839659..3840762) 1 NC_002927.3 Similar to Bacteriophage SfV tail protein orf16 SWALL:Q8SBG7 (EMBL:U82619) (359 aa) fasta scores: E(): 1.6e-13, 27.02% id in 370 aa, and to Neisseria meningitidis hypothetical protein nma1830 nma1830 or rth43 SWALL:Q9JRB5 (EMBL:AL162757) (379 aa) fasta scores: E(): 1.9e-68, 53.16% id in 348 aa; phage tail protein 3840762 2661076 BB3615 Bordetella bronchiseptica RB50 phage tail protein NP_890150.1 3839659 R 257310 CDS NP_890151.1 33602591 2659873 complement(3840746..3842005) 1 NC_002927.3 Similar to Bacteriophage SfV tail/DNA circulation protein orf15 SWALL:Q8SBG8 (EMBL:U82619) (447 aa) fasta scores: E(): 1.2e-08, 25.29% id in 431 aa, and to Neisseria meningitidis hypothetical protein nma1831 nma1831 or rth42 SWALL:Q9JR33 (EMBL:AL162757) (455 aa) fasta scores: E(): 2.1e-32, 35.89% id in 468 aa; hypothetical protein 3842005 2659873 BB3616 Bordetella bronchiseptica RB50 hypothetical protein NP_890151.1 3840746 R 257310 CDS NP_890152.1 33602592 2659874 complement(3842005..3844209) 1 NC_002927.3 Similar to Neisseria meningitidis hypothetical DNA-binding protein nma1833 or rth40 SWALL:Q9JQZ6 (EMBL:AL162757) (559 aa) fasta scores: E(): 9.2e-48, 36.51% id in 545 aa, and to Salmonella typhi bacteriophage protein sty1629 SWALL:Q8Z6T7 (EMBL:AL627270) (821 aa) fasta scores: E(): 1.8e-05, 23.12% id in 614 aa; hypothetical protein 3844209 2659874 BB3617 Bordetella bronchiseptica RB50 hypothetical protein NP_890152.1 3842005 R 257310 CDS NP_890153.1 33602593 2659875 complement(3844216..3844356) 1 NC_002927.3 no significant database matches; hypothetical protein 3844356 2659875 BB3618 Bordetella bronchiseptica RB50 hypothetical protein NP_890153.1 3844216 R 257310 CDS NP_890154.1 33602594 2659876 complement(3844353..3844745) 1 NC_002927.3 Similar to Neisseria meningitidis hypothetical protein nma1835 nma1835 or rth39 SWALL:Q9JQN5 (EMBL:AL162757) (129 aa) fasta scores: E(): 0.00012, 35.18% id in 108 aa; hypothetical protein 3844745 2659876 BB3619 Bordetella bronchiseptica RB50 hypothetical protein NP_890154.1 3844353 R 257310 CDS NP_890155.1 33602595 2659877 complement(3844742..3845116) 1 NC_002927.3 Similar to Neisseria meningitidis hypothetical protein Nmb1105 nmb1105 SWALL:Q9JZD3 (EMBL:AE002460) (125 aa) fasta scores: E(): 1.5e-22, 50.4% id in 125 aa, and to Neisseria meningitidis hypothetical protein nma1840 nma1840 or rth36 SWALL:Q9JR01 (EMBL:AL162757) (124 aa) fasta scores: E(): 3.5e-18, 48.76% id in 121 aa; hypothetical protein 3845116 2659877 BB3620 Bordetella bronchiseptica RB50 hypothetical protein NP_890155.1 3844742 R 257310 CDS NP_890156.1 33602596 2661574 complement(3845132..3846559) 1 NC_002927.3 Similar to Haemophilus influenzae mu-like prophage flumu tail sheath protein hi1511 SWALL:VPL_HAEIN (SWALL:P44233) (487 aa) fasta scores: E(): 3e-32, 33.6% id in 491 aa, and to Neisseria meningitidis hypothetical protein nma1841 nma1841 or rth35 SWALL:Q9JRG0 (EMBL:AL162757) (475 aa) fasta scores: E(): 1.5e-76, 52.41% id in 477 aa; phage tail sheath protein 3846559 2661574 BB3621 Bordetella bronchiseptica RB50 phage tail sheath protein NP_890156.1 3845132 R 257310 CDS NP_890157.1 33602597 2661575 complement(3846565..3846747) 1 NC_002927.3 Similar to Neisseria meningitidis hypothetical protein Nma1842 nma1842 SWALL:Q9JTD3 (EMBL:AL162757) (62 aa) fasta scores: E(): 2.4e-05, 47.45% id in 59 aa, and to Neisseria meningitidis hypothetical protein Nmb1103 nmb1103 SWALL:Q9JZD5 (EMBL:AE002460) (65 aa) fasta scores: E(): 0.14, 37.28% id in 59 aa; hypothetical protein 3846747 2661575 BB3622 Bordetella bronchiseptica RB50 hypothetical protein NP_890157.1 3846565 R 257310 CDS NP_890158.1 33602598 2661576 complement(3846747..3847442) 1 NC_002927.3 Similar to Neisseria meningitidis hypothetical protein nma1843 nma1843 or rth34 SWALL:Q9JQN9 (EMBL:AL162757) (222 aa) fasta scores: E(): 8.7e-24, 41.42% id in 210 aa, and to Neisseria meningitidis hypothetical protein Nmb1102 nmb1102 SWALL:Q9JZD6 (EMBL:AE002460) (197 aa) fasta scores: E(): 2.2e-15, 39.34% id in 183 aa; hypothetical protein 3847442 2661576 BB3623 Bordetella bronchiseptica RB50 hypothetical protein NP_890158.1 3846747 R 257310 CDS NP_890159.1 33602599 2661577 complement(3847439..3847870) 1 NC_002927.3 Similar to Neisseria meningitidis hypothetical protein Nmb1101 nmb1101 SWALL:Q9JZD7 (EMBL:AE002460) (140 aa) fasta scores: E(): 3.3e-17, 44.52% id in 137 aa, and to Bacteriophage Mu protein gp36 36 SWALL:VG36_BPMU (SWALL:Q9T1V9) (141 aa) fasta scores: E(): 0.012, 26.92% id in 130 aa; hypothetical protein 3847870 2661577 BB3624 Bordetella bronchiseptica RB50 hypothetical protein NP_890159.1 3847439 R 257310 CDS NP_890160.1 33602600 2660813 complement(3847968..3848240) 1 NC_002927.3 no significant database matches; hypothetical protein 3848240 2660813 BB3625 Bordetella bronchiseptica RB50 hypothetical protein NP_890160.1 3847968 R 257310 CDS NP_890161.1 33602601 2660814 complement(3848312..3849259) 1 NC_002927.3 Similar to Salmonella typhi hypothetical protein Sty1620 sty1620 SWALL:Q8Z6U6 (EMBL:AL627270) (317 aa) fasta scores: E(): 1.4e-22, 29.56% id in 318 aa; hypothetical protein 3849259 2660814 BB3626 Bordetella bronchiseptica RB50 hypothetical protein NP_890161.1 3848312 R 257310 CDS NP_890162.1 33602602 2660815 complement(3849315..3849674) 1 NC_002927.3 Similar to Salmonella typhi membrane protein sty1621 SWALL:Q8Z6U5 (EMBL:AL627270) (112 aa) fasta scores: E(): 3.9e-05, 35.29% id in 102 aa; hypothetical protein 3849674 2660815 BB3627 Bordetella bronchiseptica RB50 hypothetical protein NP_890162.1 3849315 R 257310 CDS NP_890163.1 33602603 2660816 complement(3849720..3850727) 1 NC_002927.3 Similar to Salmonella typhi hypothetical protein Sty1619 sty1619 SWALL:Q8Z6U7 (EMBL:AL627270) (371 aa) fasta scores: E(): 3.3e-20, 32.97% id in 370 aa; hypothetical protein 3850727 2660816 BB3628 Bordetella bronchiseptica RB50 hypothetical protein NP_890163.1 3849720 R 257310 CDS NP_890164.1 33602604 2660817 complement(3850962..3851519) 1 NC_002927.3 Similar to Haemophilus influenzae mu-like prophage flumu g protein 2 hi1568 SWALL:VPG2_HAEIN (SWALL:P45255) (138 aa) fasta scores: E(): 4.5e-06, 39% id in 100 aa, and to Neisseria meningitidis hypothetical protein nma1849 nma1849 or rth29 SWALL:Q9JR88 (EMBL:AL162757) (165 aa) fasta scores: E(): 2.4e-09, 32.63% id in 190 aa; hypothetical protein 3851519 2660817 BB3629 Bordetella bronchiseptica RB50 hypothetical protein NP_890164.1 3850962 R 257310 CDS NP_890165.1 33602605 2660429 complement(3851661..3853001) 1 NC_002927.3 Similar to Bacteriophage Mu f protein f or 30 SWALL:VPF_BPMU (SWALL:Q01259) (439 aa) fasta scores: E(): 2.4e-39, 34.06% id in 455 aa, and to Escherichia coli O157:H7 hypothetical protein Ecs4971 ecs4971 SWALL:Q8X313 (EMBL:AP002567) (441 aa) fasta scores: E(): 1.9e-40, 33.7% id in 454 aa; hypothetical protein 3853001 2660429 BB3630 Bordetella bronchiseptica RB50 hypothetical protein NP_890165.1 3851661 R 257310 CDS NP_890166.1 33602606 2660430 complement(3852994..3854529) 1 NC_002927.3 Similar to Bacteriophage Mu protein gp29 29 SWALL:VG29_BPMU (SWALL:Q9T1W5) (512 aa) fasta scores: E(): 1.5e-22, 28.6% id in 472 aa, and to Neisseria meningitidis hypothetical protein Nma1851 nma1851 SWALL:Q9JTD2 (EMBL:AL162757) (519 aa) fasta scores: E(): 2.5e-24, 27.33% id in 472 aa; hypothetical protein 3854529 2660430 BB3631 Bordetella bronchiseptica RB50 hypothetical protein NP_890166.1 3852994 R 257310 CDS NP_890167.1 33602607 2660431 complement(3854529..3856211) 1 NC_002927.3 Similar to Bacteriophage Mu protein gp28 28 SWALL:VG28_BPMU (SWALL:Q9T1W6) (551 aa) fasta scores: E(): 1.6e-66, 40.15% id in 533 aa, and to Escherichia coli O157:H7 portal protein ecs4969 SWALL:Q8X315 (EMBL:AP002567) (554 aa) fasta scores: E(): 2.2e-66, 38.3% id in 530 aa; hypothetical protein 3856211 2660431 BB3632 Bordetella bronchiseptica RB50 hypothetical protein NP_890167.1 3854529 R 257310 CDS NP_890168.1 33602608 2660432 complement(3856211..3856762) 1 NC_002927.3 Similar to Haemophilus influenzae mu-like prophage flumu protein gp27 hi1499 SWALL:VG27_HAEIN (SWALL:P44223) (189 aa) fasta scores: E(): 0.00053, 27.95% id in 186 aa, and to Bacteriophage Mu protein gp27 27 SWALL:VG27_BPMU (SWALL:Q9T1W7) (191 aa) fasta scores: E(): 0.0043, 26.34% id in 186 aa; hypothetical protein 3856762 2660432 BB3633 Bordetella bronchiseptica RB50 hypothetical protein NP_890168.1 3856211 R 257310 CDS NP_890169.1 33602609 2660433 complement(3856766..3857065) 1 NC_002927.3 Similar to Bacteriophage Mu hypothetical protein gp26 26 SWALL:VG26_BPMU (SWALL:Q9T1W8) (96 aa) fasta scores: E(): 8.5e-13, 51.11% id in 90 aa, and to Escherichia coli O157:H7 hypothetical protein Ecs4967 ecs4967 SWALL:Q8X317 (EMBL:AP002567) (96 aa) fasta scores: E(): 4.1e-12, 48.93% id in 94 aa; hypothetical protein 3857065 2660433 BB3634 Bordetella bronchiseptica RB50 hypothetical protein NP_890169.1 3856766 R 257310 CDS NP_890170.1 33602610 2661529 complement(3857076..3857372) 1 NC_002927.3 no significant database matches; hypothetical protein 3857372 2661529 BB3635 Bordetella bronchiseptica RB50 hypothetical protein NP_890170.1 3857076 R 257310 CDS NP_890171.1 33602611 2661530 complement(3857369..3857464) 1 NC_002927.3 no significant database matches; hypothetical protein 3857464 2661530 BB3636 Bordetella bronchiseptica RB50 hypothetical protein NP_890171.1 3857369 R 257310 CDS NP_890172.1 33602612 2661531 complement(3857475..3857891) 1 NC_002927.3 no significant database matches; hypothetical protein 3857891 2661531 BB3637 Bordetella bronchiseptica RB50 hypothetical protein NP_890172.1 3857475 R 257310 CDS NP_890173.1 33602613 2659488 complement(3857888..3858523) 1 NC_002927.3 Similar to Escherichia coli soluble lytic murein transglycosylase precursor slt or slty or b4392 SWALL:SLT_ECOLI (SWALL:P03810) (645 aa) fasta scores: E(): 0.00016, 28.49% id in 179 aa, and to Salmonella typhimurium soluble lytic murein transglycosylase stm4217 SWALL:Q8ZKI8 (EMBL:AE008897) (201 aa) fasta scores: E(): 4.2e-47, 60.93% id in 192 aa; lytic murein transglycosylase precursor 3858523 2659488 BB3638 Bordetella bronchiseptica RB50 lytic murein transglycosylase precursor NP_890173.1 3857888 R 257310 CDS NP_890174.1 33602614 2659489 complement(3858523..3858903) 1 NC_002927.3 Similar to Salmonella typhi hypothetical protein Sty1608 SWALL:Q8Z6V8 (EMBL:AL627270) (116 aa) fasta scores: E(): 8.5e-16, 54.63% id in 108 aa, and to Salmonella typhimurium inner membrane protein stm4218 SWALL:Q8ZKI7 (EMBL:AE008897) (95 aa) fasta scores: E(): 1.3e-09, 47.27% id in 110 aa; phage-related membrane protein 3858903 2659489 BB3639 Bordetella bronchiseptica RB50 phage-related membrane protein NP_890174.1 3858523 R 257310 CDS NP_890175.1 33602615 2660452 complement(3859012..3859440) 1 NC_002927.3 no significant database matches; hypothetical protein 3859440 2660452 BB3640 Bordetella bronchiseptica RB50 hypothetical protein NP_890175.1 3859012 R 257310 CDS NP_890176.1 33602616 2660453 complement(3859489..3860100) 1 NC_002927.3 Similar to Escherichia coli O157:H7 hypothetical 24.2 kDa protein z2968 or ecs2619 SWALL:Q8XBI0 (EMBL:AE005412) (216 aa) fasta scores: E(): 2.9e-10, 34.22% id in 149 aa; hypothetical protein 3860100 2660453 BB3641 Bordetella bronchiseptica RB50 hypothetical protein NP_890176.1 3859489 R 257310 CDS NP_890177.1 33602617 2660454 complement(3860104..3860469) 1 NC_002927.3 Similar to Xanthomonas campestris phage-related protein z2969 or xcc2997 SWALL:AAM42269 (EMBL:AE012413) (142 aa) fasta scores: E(): 8.4e-07, 41.12% id in 124 aa; hypothetical protein 3860469 2660454 BB3642 Bordetella bronchiseptica RB50 hypothetical protein NP_890177.1 3860104 R 257310 CDS NP_890178.1 33602618 2658965 3860646..3860870 1 NC_002927.3 Similar to Neisseria meningitidis hypothetical protein Nmb1004 nmb1004 SWALL:Q9JZL2 (EMBL:AE002451) (81 aa) fasta scores: E(): 0.65, 33.33% id in 60 aa; hypothetical protein 3860870 2658965 BB3643 Bordetella bronchiseptica RB50 hypothetical protein NP_890178.1 3860646 D 257310 CDS NP_890179.1 33602619 2658966 3860989..3861507 1 NC_002927.3 no significant database matches; hypothetical protein 3861507 2658966 BB3644 Bordetella bronchiseptica RB50 hypothetical protein NP_890179.1 3860989 D 257310 CDS NP_890180.1 33602620 2658967 3861504..3861809 1 NC_002927.3 Similar to Neisseria meningitidis hypothetical protein Nmb1003 nmb1003 SWALL:Q9JZL3 (EMBL:AE002451) (98 aa) fasta scores: E(): 2.3e-10, 40.42% id in 94 aa; hypothetical protein 3861809 2658967 BB3645 Bordetella bronchiseptica RB50 hypothetical protein NP_890180.1 3861504 D 257310 CDS NP_890181.1 33602621 2658968 3861828..3862721 1 NC_002927.3 Similar to Neisseria meningitidis hypothetical protein Nmb1002 nmb1002 SWALL:Q9JZL4 (EMBL:AE002451) (291 aa) fasta scores: E(): 1.2e-22, 34.92% id in 272 aa, and to Salmonella typhi hypothetical protein Sty1606 sty1606 SWALL:Q8Z6W0 (EMBL:AL627270) (143 aa) fasta scores: E(): 1.2e-17, 53.9% id in 141 aa; hypothetical protein 3862721 2658968 BB3646 Bordetella bronchiseptica RB50 hypothetical protein NP_890181.1 3861828 D 257310 CDS NP_890182.1 33602622 2661220 3862724..3864499 1 NC_002927.3 Similar to Salmonella typhi hypothetical protein Sty1604 sty1604 SWALL:Q8Z6W2 (EMBL:AL627270) (589 aa) fasta scores: E(): 2.3e-114, 51.36% id in 586 aa, and to Vibrio cholerae hypothetical protein Vc1799 vc1799 SWALL:Q9KR47 (EMBL:AE004256) (585 aa) fasta scores: E(): 5.4e-48, 34.57% id in 564 aa; hypothetical protein 3864499 2661220 BB3647 Bordetella bronchiseptica RB50 hypothetical protein NP_890182.1 3862724 D 257310 CDS NP_890183.1 33602623 2659643 3864510..3865694 1 NC_002927.3 Similar to Salmonella typhi Eha SWALL:O87649 (EMBL:AF091717) (322 aa) fasta scores: E(): 2.1e-41, 56.19% id in 226 aa, and to Vibrio cholerae Eha protein vc1798 SWALL:Q9KR48 (EMBL:AE004256) (383 aa) fasta scores: E(): 9.1e-23, 34.66% id in 375 aa; hypothetical protein 3865694 eha 2659643 eha Bordetella bronchiseptica RB50 hypothetical protein NP_890183.1 3864510 D 257310 CDS NP_890184.1 33602624 2659644 3865685..3866005 1 NC_002927.3 no significant database matches; hypothetical protein 3866005 2659644 BB3649 Bordetella bronchiseptica RB50 hypothetical protein NP_890184.1 3865685 D 257310 CDS NP_890185.1 33602625 2659645 3865999..3866202 1 NC_002927.3 no significant database matches; hypothetical protein 3866202 2659645 BB3650 Bordetella bronchiseptica RB50 hypothetical protein NP_890185.1 3865999 D 257310 CDS NP_890186.1 33602626 2661240 3866202..3866807 1 NC_002927.3 Similar to Neisseria meningitidis hypothetical protein Nma1874 nma1874 SWALL:Q9JTC5 (EMBL:AL162757) (125 aa) fasta scores: E(): 1.6e-07, 34.48% id in 116 aa; hypothetical protein 3866807 2661240 BB3651 Bordetella bronchiseptica RB50 hypothetical protein NP_890186.1 3866202 D 257310 CDS NP_890187.1 33602627 2661241 3866804..3867424 1 NC_002927.3 Similar to Neisseria meningitidis hypothetical protein nma1871 nma1871 or rth11 SWALL:Q9JRE4 (EMBL:AL162757) (203 aa) fasta scores: E(): 5.4e-33, 52.55% id in 196 aa; hypothetical protein 3867424 2661241 BB3652 Bordetella bronchiseptica RB50 hypothetical protein NP_890187.1 3866804 D 257310 CDS NP_890188.1 33602628 2661242 3867544..3867825 1 NC_002927.3 Similar to Streptococcus thermophilus DNA-binding protein Hu Hup or HstH SWALL:DBH_STRTR (SWALL:P96045) (91 aa) fasta scores: E(): 6.4e-11, 48.27% id in 87 aa, and to Lactococcus lactis HllA hllA SWALL:AAK08222 (EMBL:AF320916) (91 aa) fasta scores: E(): 3.7e-12, 48.27% id in 87 aa; histone-like DNA-binding protein 3867825 hup 2661242 hup Bordetella bronchiseptica RB50 histone-like DNA-binding protein NP_890188.1 3867544 D 257310 CDS NP_890189.1 33602629 2661243 3867922..3868287 1 NC_002927.3 Similar to Pseudomonas phage phiKZ phikz184 SWALL:Q8SCX8 (EMBL:AF399011) (230 aa) fasta scores: E(): 0.0036, 33.04% id in 115 aa; hypothetical protein 3868287 2661243 BB3654 Bordetella bronchiseptica RB50 hypothetical protein NP_890189.1 3867922 D 257310 CDS NP_890190.1 33602630 2662049 3868367..3868783 1 NC_002927.3 Similar to Caenorhabditis elegans K11e8.1B protein k11e8.1B SWALL:O62304 (EMBL:Z70279) (137 aa) fasta scores: E(): 7.2, 27.67% id in 112 aa; hypothetical protein 3868783 2662049 BB3655 Bordetella bronchiseptica RB50 hypothetical protein NP_890190.1 3868367 D 257310 CDS NP_890191.1 33602631 2662050 3868788..3869378 1 NC_002927.3 Similar to Bacteriophage Mu protein gp16 16 or e16 or gemA SWALL:VG16_BPMU (SWALL:Q38494) (183 aa) fasta scores: E(): 4.7e-11, 32.96% id in 179 aa, and to Salmonella typhi hypothetical protein Sty1592 sty1592 SWALL:Q8Z6X2 (EMBL:AL627270) (150 aa) fasta scores: E(): 3.8e-20, 51.14% id in 131 aa; hypothetical protein 3869378 2662050 BB3656 Bordetella bronchiseptica RB50 hypothetical protein NP_890191.1 3868788 D 257310 CDS NP_890192.1 33602632 2662051 3869380..3869742 1 NC_002927.3 Similar to Salmonella typhi bacteriophage transcriptional regulator sty1591 SWALL:Q8Z6X3 (EMBL:AL627270) (129 aa) fasta scores: E(): 6.7e-07, 32.4% id in 108 aa, and to Erwinia carotovora DNA-binding protein RdgB rdgB SWALL:RDGB_ERWCA (SWALL:Q47588) (117 aa) fasta scores: E(): 0.033, 25.49% id in 102 aa; phage-related DNA-binding protein 3869742 2662051 BB3657 Bordetella bronchiseptica RB50 phage-related DNA-binding protein NP_890192.1 3869380 D 257310 CDS NP_890193.1 33602633 2662052 complement(3869831..3872335) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1138; ferric siderophore receptor 3872335 bfrH 2662052 bfrH Bordetella bronchiseptica RB50 ferric siderophore receptor NP_890193.1 3869831 R 257310 CDS NP_890194.1 33602634 2662638 complement(3872429..3873391) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1137; signal transduction protein 3873391 fecR 2662638 fecR Bordetella bronchiseptica RB50 signal transduction protein NP_890194.1 3872429 R 257310 CDS NP_890195.1 33602635 2662639 complement(3873384..3873917) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1136; ECF family RNA polymerase sigma factor 3873917 fecI 2662639 fecI Bordetella bronchiseptica RB50 ECF family RNA polymerase sigma factor NP_890195.1 3873384 R 257310 CDS NP_890196.1 33602636 2662596 3874177..3875025 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1135; alpha-ketoglutarate-dependent taurine dioxygenase 3875025 tauD 2662596 tauD Bordetella bronchiseptica RB50 alpha-ketoglutarate-dependent taurine dioxygenase NP_890196.1 3874177 D 257310 CDS NP_890197.1 33602637 2662597 3875022..3875744 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1132; short-chain dehydrogenase 3875744 2662597 BB3662 Bordetella bronchiseptica RB50 short-chain dehydrogenase NP_890197.1 3875022 D 257310 CDS NP_890198.1 33602638 2661441 3875799..3876782 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1131; hypothetical protein 3876782 2661441 BB3663 Bordetella bronchiseptica RB50 hypothetical protein NP_890198.1 3875799 D 257310 CDS NP_890199.1 33602639 2661442 complement(3876810..3877712) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1129; LysR family transcriptional regulator 3877712 2661442 BB3664 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_890199.1 3876810 R 257310 CDS NP_890200.1 33602640 2659475 3877800..3878558 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1128; 3-oxoacyl-ACP reductase 3878558 fabG 2659475 fabG Bordetella bronchiseptica RB50 3-oxoacyl-ACP reductase NP_890200.1 3877800 D 257310 CDS NP_890201.1 33602641 2659476 complement(3878571..3879719) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1127; hypothetical protein 3879719 2659476 BB3666 Bordetella bronchiseptica RB50 hypothetical protein NP_890201.1 3878571 R 257310 CDS NP_890202.1 33602642 2660751 complement(3879760..3881187) 1 NC_002927.3 E3 component of 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 3881187 odhL 2660751 odhL Bordetella bronchiseptica RB50 dihydrolipoamide dehydrogenase NP_890202.1 3879760 R 257310 CDS NP_890203.1 33602643 2659581 complement(3881417..3882637) 1 NC_002927.3 component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA; dihydrolipoamide succinyltransferase 3882637 odhB 2659581 odhB Bordetella bronchiseptica RB50 dihydrolipoamide succinyltransferase NP_890203.1 3881417 R 257310 CDS NP_890204.1 33602644 2659790 complement(3882683..3885553) 1 NC_002927.3 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component 3885553 sucA 2659790 sucA Bordetella bronchiseptica RB50 2-oxoglutarate dehydrogenase E1 component NP_890204.1 3882683 R 257310 CDS NP_890205.1 33602645 2659463 complement(3885878..3887959) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1123; hypothetical protein 3887959 2659463 BB3670 Bordetella bronchiseptica RB50 hypothetical protein NP_890205.1 3885878 R 257310 CDS NP_890206.1 33602646 2659464 complement(3887962..3888513) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1122; transcription regulator AsnC 3888513 2659464 BB3671 Bordetella bronchiseptica RB50 transcription regulator AsnC NP_890206.1 3887962 R 257310 CDS NP_890207.1 33602647 2659570 3888573..3891269 1 NC_002927.3 paralogs to the E1 component of pyruvate dehydrogenase subunit E1; 2-oxoacid dehydrogenase subunit E1 3891269 aceE 2659570 aceE Bordetella bronchiseptica RB50 2-oxoacid dehydrogenase subunit E1 NP_890207.1 3888573 D 257310 CDS NP_890208.1 33602648 2659571 3891399..3893705 1 NC_002927.3 NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme 3893705 maeB 2659571 maeB Bordetella bronchiseptica RB50 malic enzyme NP_890208.1 3891399 D 257310 CDS NP_890209.1 33602649 2660489 3893880..3894515 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP1119; serotype 2 fimbrial subunit precursor 3894515 fim2 2660489 fim2 Bordetella bronchiseptica RB50 serotype 2 fimbrial subunit precursor NP_890209.1 3893880 D 257310 CDS NP_890210.1 33602650 2660776 3894626..3895078 1 NC_002927.3 inner membrane protein 3895078 2660776 BB3675 Bordetella bronchiseptica RB50 inner membrane protein NP_890210.1 3894626 D 257310 CDS NP_890211.1 33602651 2660777 complement(3895094..3896245) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2356; hypothetical protein 3896245 2660777 BB3676 Bordetella bronchiseptica RB50 hypothetical protein NP_890211.1 3895094 R 257310 CDS NP_890212.1 33602652 2659626 complement(3896295..3897605) 1 NC_002927.3 type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; type II citrate synthase 3897605 gltA 2659626 gltA Bordetella bronchiseptica RB50 type II citrate synthase NP_890212.1 3896295 R 257310 CDS NP_890213.1 33602653 2659622 complement(3897626..3897886) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2359; hypothetical protein 3897886 2659622 BB3678 Bordetella bronchiseptica RB50 hypothetical protein NP_890213.1 3897626 R 257310 CDS NP_890214.1 33602654 2659623 complement(3897912..3898628) 1 NC_002927.3 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit 3898628 sdhB 2659623 sdhB Bordetella bronchiseptica RB50 succinate dehydrogenase iron-sulfur subunit NP_890214.1 3897912 R 257310 CDS NP_890215.1 33602655 2659682 complement(3898641..3900419) 1 NC_002927.3 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 3900419 sdhA 2659682 sdhA Bordetella bronchiseptica RB50 succinate dehydrogenase flavoprotein subunit NP_890215.1 3898641 R 257310 CDS NP_890216.1 33602656 2659106 complement(3900423..3900806) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2362; succinate dehydrogenase hydrophobic membrane anchor protein 3900806 sdhD 2659106 sdhD Bordetella bronchiseptica RB50 succinate dehydrogenase hydrophobic membrane anchor protein NP_890216.1 3900423 R 257310 CDS NP_890217.1 33602657 2662221 complement(3900806..3901219) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2363; succinate dehydrogenase cytochrome B subunit 3901219 sdhC 2662221 sdhC Bordetella bronchiseptica RB50 succinate dehydrogenase cytochrome B subunit NP_890217.1 3900806 R 257310 CDS NP_890218.1 33602658 2659042 complement(3901344..3902123) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2364; GntR family transcriptional regulator 3902123 2659042 BB3683 Bordetella bronchiseptica RB50 GntR family transcriptional regulator NP_890218.1 3901344 R 257310 CDS NP_890219.1 33602659 2659043 3902412..3903401 1 NC_002927.3 catalyzes the oxidation of malate to oxaloacetate; malate dehydrogenase 3903401 mdH 2659043 mdH Bordetella bronchiseptica RB50 malate dehydrogenase NP_890219.1 3902412 D 257310 CDS NP_890220.1 33602660 2661162 3903663..3904556 1 NC_002927.3 catalyzes the formation of pyruvate and succinate from 2-methylisocitrate; 2-methylisocitrate lyase 3904556 prpB 2661162 prpB Bordetella bronchiseptica RB50 2-methylisocitrate lyase NP_890220.1 3903663 D 257310 CDS NP_890221.1 33602661 2661163 3904630..3905832 1 NC_002927.3 catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate; also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity; methylcitrate synthase 3905832 prpC 2661163 prpC Bordetella bronchiseptica RB50 methylcitrate synthase NP_890221.1 3904630 D 257310 CDS NP_890222.2 161609264 2662010 3905951..3908545 1 NC_002927.3 Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 3908545 acnA 2662010 acnA Bordetella bronchiseptica RB50 aconitate hydratase NP_890222.2 3905951 D 257310 CDS NP_890223.1 33602663 2659302 3908602..3909792 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2370; hypothetical protein 3909792 2659302 BB3688 Bordetella bronchiseptica RB50 hypothetical protein NP_890223.1 3908602 D 257310 CDS NP_890224.1 33602664 2659303 3909810..3911267 1 NC_002927.3 functions in propionate metabolism; involved in isomerization of (2S,3S)-methylcitrate to (2R,3S)-methylisocitrate; also encodes minor aconitase or dehydratase activity; aconitase C; 2-methylcitrate dehydratase 3911267 prpD 2659303 prpD Bordetella bronchiseptica RB50 2-methylcitrate dehydratase NP_890224.1 3909810 D 257310 CDS NP_890225.1 33602665 2659104 3911289..3911759 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2372; inner membrane protein 3911759 2659104 BB3690 Bordetella bronchiseptica RB50 inner membrane protein NP_890225.1 3911289 D 257310 CDS NP_890226.1 33602666 2659105 3911789..3913288 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2373; hypothetical protein 3913288 2659105 BB3691 Bordetella bronchiseptica RB50 hypothetical protein NP_890226.1 3911789 D 257310 CDS NP_890227.1 33602667 2661235 3913504..3913686 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2374; hypothetical protein 3913686 2661235 BB3692 Bordetella bronchiseptica RB50 hypothetical protein NP_890227.1 3913504 D 257310 CDS NP_890228.1 33602668 2661236 3913820..3914350 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2375; hypothetical protein 3914350 2661236 BB3693 Bordetella bronchiseptica RB50 hypothetical protein NP_890228.1 3913820 D 257310 CDS NP_890229.1 33602669 2659492 3914416..3915288 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2376; hypothetical protein 3915288 2659492 BB3694 Bordetella bronchiseptica RB50 hypothetical protein NP_890229.1 3914416 D 257310 CDS NP_890230.1 33602670 2659493 3915426..3917090 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2377; AMP-binding protein 3917090 2659493 BB3695 Bordetella bronchiseptica RB50 AMP-binding protein NP_890230.1 3915426 D 257310 CDS NP_890231.1 33602671 2659961 3917102..3917623 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2378; transferase 3917623 2659961 BB3696 Bordetella bronchiseptica RB50 transferase NP_890231.1 3917102 D 257310 CDS NP_890232.1 33602672 2659854 3917673..3918593 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2379; chaperonin 3918593 2659854 BB3697 Bordetella bronchiseptica RB50 chaperonin NP_890232.1 3917673 D 257310 CDS NP_890233.1 33602673 2659855 3918670..3919422 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2380; tight adherance protein E 3919422 2659855 BB3698 Bordetella bronchiseptica RB50 tight adherance protein E NP_890233.1 3918670 D 257310 CDS NP_890234.1 33602674 2659432 complement(3919826..3920305) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2382; hypothetical protein 3920305 2659432 BB3699 Bordetella bronchiseptica RB50 hypothetical protein NP_890234.1 3919826 R 257310 CDS NP_890235.1 33602675 2659433 complement(3920355..3921110) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2383; hypothetical protein 3921110 2659433 BB3700 Bordetella bronchiseptica RB50 hypothetical protein NP_890235.1 3920355 R 257310 CDS NP_890236.1 33602676 2660401 3921320..3922885 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2384; transcriptional regulator 3922885 2660401 BB3701 Bordetella bronchiseptica RB50 transcriptional regulator NP_890236.1 3921320 D 257310 CDS NP_890237.1 33602677 2659552 complement(3922946..3923302) 1 NC_002927.3 forms a complex with FtsL and FtsQ; colocalizes to the septal region of the dividing cell; membrane protein; cell division protein FtsB 3923302 ftsB 2659552 ftsB Bordetella bronchiseptica RB50 cell division protein FtsB NP_890237.1 3922946 R 257310 CDS NP_890238.1 33602678 2659553 complement(3923384..3924670) 1 NC_002927.3 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 3924670 eno 2659553 eno Bordetella bronchiseptica RB50 phosphopyruvate hydratase NP_890238.1 3923384 R 257310 CDS NP_890239.1 33602679 2659891 complement(3924676..3924960) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2387; hypothetical protein 3924960 2659891 BB3704 Bordetella bronchiseptica RB50 hypothetical protein NP_890239.1 3924676 R 257310 CDS NP_890240.1 33602680 2659892 complement(3924970..3925827) 1 NC_002927.3 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 3925827 kdsA 2659892 kdsA Bordetella bronchiseptica RB50 2-dehydro-3-deoxyphosphooctonate aldolase NP_890240.1 3924970 R 257310 CDS NP_890241.1 33602681 2661376 complement(3925824..3927476) 1 NC_002927.3 CTP synthase; CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 3927476 pyrG 2661376 pyrG Bordetella bronchiseptica RB50 CTP synthetase NP_890241.1 3925824 R 257310 CDS NP_890242.1 33602682 2659804 complement(3927692..3929491) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2391; aminopeptidase 3929491 2659804 BB3707 Bordetella bronchiseptica RB50 aminopeptidase NP_890242.1 3927692 R 257310 CDS NP_890243.1 33602683 2659880 complement(3929500..3930318) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2392; transporter 3930318 2659880 BB3708 Bordetella bronchiseptica RB50 transporter NP_890243.1 3929500 R 257310 CDS NP_890244.1 33602684 2659881 complement(3930345..3931493) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2393; Similar to Ochrobactrum anthropi D-aminopeptidase dmpA SWALL:Q59632 (EMBL:X97669) (375 aa) fasta scores: E(): 1.9e-33, 37.7% id in 358 aa, and to Ralstonia solanacearum probable D-aminopeptidase rsc1383 or rs04666 SWALL:Q8XZL2 (EMBL:AL646064) (341 aa) fasta scores: E(): 6.4e-84, 69.43% id in 337 aa; D-aminopeptidase 3931493 2659881 BB3709 Bordetella bronchiseptica RB50 D-aminopeptidase NP_890244.1 3930345 R 257310 CDS NP_890245.1 33602685 2659921 complement(3931511..3932410) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2394; binding-protein-dependent transport permease 3932410 2659921 BB3710 Bordetella bronchiseptica RB50 binding-protein-dependent transport permease NP_890245.1 3931511 R 257310 CDS NP_890246.1 33602686 2659922 complement(3932418..3933338) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2395; binding-protein-dependent transport permease 3933338 2659922 BB3711 Bordetella bronchiseptica RB50 binding-protein-dependent transport permease NP_890246.1 3932418 R 257310 CDS NP_890247.1 33602687 2659423 complement(3933400..3934953) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2396; glutathione ABC transporter substrate-binding protein 3934953 2659423 BB3712 Bordetella bronchiseptica RB50 glutathione ABC transporter substrate-binding protein NP_890247.1 3933400 R 257310 CDS NP_890248.1 33602688 2659424 complement(3935024..3936925) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2397; ABC transporter ATP-binding protein 3936925 2659424 BB3713 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_890248.1 3935024 R 257310 CDS NP_890249.1 33602689 2659533 complement(3936970..3937950) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2398; L-asparaginase 3937950 2659533 BB3714 Bordetella bronchiseptica RB50 L-asparaginase NP_890249.1 3936970 R 257310 CDS NP_890250.1 33602690 2660446 complement(3937947..3938831) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2399; transcriptional regulator 3938831 2660446 BB3715 Bordetella bronchiseptica RB50 transcriptional regulator NP_890250.1 3937947 R 257310 CDS NP_890251.1 33602691 2660447 complement(3939056..3939709) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2400; coenzyme A transferase subunit 3939709 2660447 BB3716 Bordetella bronchiseptica RB50 coenzyme A transferase subunit NP_890251.1 3939056 R 257310 CDS NP_890252.1 33602692 2659574 complement(3939722..3940420) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2401; coenzyme A transferase subunit 3940420 2659574 BB3717 Bordetella bronchiseptica RB50 coenzyme A transferase subunit NP_890252.1 3939722 R 257310 CDS NP_890253.1 33602693 2661113 complement(3940524..3940973) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2402; hypothetical protein 3940973 2661113 BB3718 Bordetella bronchiseptica RB50 hypothetical protein NP_890253.1 3940524 R 257310 CDS NP_890254.1 33602694 2659323 3941101..3942729 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2403; electron transfer flavoprotein-ubiquinone oxidoreductase 3942729 2659323 BB3719 Bordetella bronchiseptica RB50 electron transfer flavoprotein-ubiquinone oxidoreductase NP_890254.1 3941101 D 257310 CDS NP_890255.1 33602695 2659324 3942827..3943711 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2404; hypothetical protein 3943711 2659324 BB3720 Bordetella bronchiseptica RB50 hypothetical protein NP_890255.1 3942827 D 257310 CDS NP_890256.1 33602696 2659325 3943708..3944865 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2405; cytochrome p450 oxidoreductase 3944865 2659325 BB3721 Bordetella bronchiseptica RB50 cytochrome p450 oxidoreductase NP_890256.1 3943708 D 257310 CDS NP_890257.1 33602697 2659326 3944862..3945224 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2406; hypothetical protein 3945224 2659326 BB3722 Bordetella bronchiseptica RB50 hypothetical protein NP_890257.1 3944862 D 257310 CDS NP_890258.1 33602698 2660062 complement(3945238..3946257) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2407; low-specificity L-threonine aldolase 3946257 ltaE 2660062 ltaE Bordetella bronchiseptica RB50 low-specificity L-threonine aldolase NP_890258.1 3945238 R 257310 CDS NP_890259.1 33602699 2660063 complement(3946279..3947175) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2408; integral membrane protein 3947175 2660063 BB3724 Bordetella bronchiseptica RB50 integral membrane protein NP_890259.1 3946279 R 257310 CDS NP_890260.2 161609263 2662112 complement(3947321..3949300) 1 NC_002927.3 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase 3949300 2662112 BB3725 Bordetella bronchiseptica RB50 acetyl-CoA synthetase NP_890260.2 3947321 R 257310 CDS NP_890261.1 33602701 2660087 complement(3949512..3950852) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2410; integral membrane protein 3950852 2660087 BB3726 Bordetella bronchiseptica RB50 integral membrane protein NP_890261.1 3949512 R 257310 CDS NP_890262.1 33602702 2660088 complement(3950849..3951256) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2411; hypothetical protein 3951256 2660088 BB3727 Bordetella bronchiseptica RB50 hypothetical protein NP_890262.1 3950849 R 257310 CDS NP_890263.1 33602703 2659332 complement(3951253..3953142) 1 NC_002927.3 catalyzes the formation of propionyl-CoA using propionate as a substrate; PrpE from Ralstonia solanacearum can produce acetyl-, propionyl-, butyryl- and acrylyl-coenzyme A, and Salmonella enterica produces propionyl- and butyryl-coenzyme A; not expressed in Escherichia coli when grown on propionate/minimal media; ATP-dependent; propionyl-CoA synthetase 3953142 prpE 2659332 prpE Bordetella bronchiseptica RB50 propionyl-CoA synthetase NP_890263.1 3951253 R 257310 CDS NP_890264.1 33602704 2662171 3953367..3954035 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2413; lipoprotein 3954035 2662171 BB3729 Bordetella bronchiseptica RB50 lipoprotein NP_890264.1 3953367 D 257310 CDS NP_890265.1 33602705 2660110 complement(3954170..3954481) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2414; hypothetical protein 3954481 2660110 BB3730 Bordetella bronchiseptica RB50 hypothetical protein NP_890265.1 3954170 R 257310 CDS NP_890266.1 33602706 2660111 complement(3954697..3955641) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2416; transcriptional regulator CysB-like protein 3955641 2660111 BB3731 Bordetella bronchiseptica RB50 transcriptional regulator CysB-like protein NP_890266.1 3954697 R 257310 CDS NP_890267.1 33602707 2660851 complement(3955741..3957234) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2417; oxidoreductase 3957234 2660851 BB3732 Bordetella bronchiseptica RB50 oxidoreductase NP_890267.1 3955741 R 257310 CDS NP_890268.1 33602708 2660688 complement(3957331..3958548) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2418; ABC transporter substrate-binding protein 3958548 2660688 BB3733 Bordetella bronchiseptica RB50 ABC transporter substrate-binding protein NP_890268.1 3957331 R 257310 CDS NP_890269.1 33602709 2659902 3958688..3959608 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2419; LysR family transcriptional regulator 3959608 2659902 BB3734 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_890269.1 3958688 D 257310 CDS NP_890270.1 33602710 2659551 complement(3959605..3960717) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2420; integral membrane protein 3960717 2659551 BB3735 Bordetella bronchiseptica RB50 integral membrane protein NP_890270.1 3959605 R 257310 CDS NP_890271.1 33602711 2661335 3960771..3962270 1 NC_002927.3 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 3962270 pepA 2661335 pepA Bordetella bronchiseptica RB50 leucyl aminopeptidase NP_890271.1 3960771 D 257310 CDS NP_890272.1 33602712 2661434 3962288..3962743 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2422; hypothetical protein 3962743 2661434 BB3737 Bordetella bronchiseptica RB50 hypothetical protein NP_890272.1 3962288 D 257310 CDS NP_890273.1 33602713 2661435 3962774..3963100 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2423; hypothetical protein 3963100 2661435 BB3738 Bordetella bronchiseptica RB50 hypothetical protein NP_890273.1 3962774 D 257310 CDS NP_890274.1 33602714 2661436 3963200..3963910 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2424; integral membrane protein 3963910 2661436 BB3739 Bordetella bronchiseptica RB50 integral membrane protein NP_890274.1 3963200 D 257310 CDS NP_890275.1 33602715 2659590 3963972..3965045 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2425; hypothetical protein 3965045 2659590 BB3740 Bordetella bronchiseptica RB50 hypothetical protein NP_890275.1 3963972 D 257310 CDS NP_890276.1 33602716 2659591 3965042..3966022 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2426; hypothetical protein 3966022 2659591 BB3741 Bordetella bronchiseptica RB50 hypothetical protein NP_890276.1 3965042 D 257310 CDS NP_890277.1 33602717 2660784 3966026..3967126 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2427; threonine synthase 3967126 2660784 BB3742 Bordetella bronchiseptica RB50 threonine synthase NP_890277.1 3966026 D 257310 CDS NP_890278.1 33602718 2660785 complement(3967123..3968043) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2428; LysR family transcriptional regulator 3968043 2660785 BB3743 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_890278.1 3967123 R 257310 CDS NP_890279.1 33602719 2660930 complement(3968063..3968650) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2429; hypothetical protein 3968650 2660930 BB3744 Bordetella bronchiseptica RB50 hypothetical protein NP_890279.1 3968063 R 257310 CDS NP_890280.1 33602720 2660323 complement(3968643..3969533) 1 NC_002927.3 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 3969533 era 2660323 era Bordetella bronchiseptica RB50 GTP-binding protein Era NP_890280.1 3968643 R 257310 CDS NP_890281.1 33602721 2660324 complement(3969530..3970300) 1 NC_002927.3 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 3970300 rnc 2660324 rnc Bordetella bronchiseptica RB50 ribonuclease III NP_890281.1 3969530 R 257310 CDS NP_890282.1 33602722 2659098 complement(3970297..3971181) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2432; signal peptidase I 3971181 lep 2659098 lep Bordetella bronchiseptica RB50 signal peptidase I NP_890282.1 3970297 R 257310 CDS NP_890283.1 33602723 2663946 complement(3971204..3972997) 1 NC_002927.3 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 3972997 lepA 2663946 lepA Bordetella bronchiseptica RB50 GTP-binding protein LepA NP_890283.1 3971204 R 257310 CDS NP_890284.1 33602724 2662021 complement(3973128..3974615) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2434; serine protease 3974615 mucD 2662021 mucD Bordetella bronchiseptica RB50 serine protease NP_890284.1 3973128 R 257310 CDS NP_890285.1 33602725 2659392 complement(3974653..3975714) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2435; sigma factor regulatory protein 3975714 mucB 2659392 mucB Bordetella bronchiseptica RB50 sigma factor regulatory protein NP_890285.1 3974653 R 257310 CDS NP_890286.1 33602726 2659703 complement(3975711..3976211) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2436; hypothetical protein 3976211 2659703 BB3751 Bordetella bronchiseptica RB50 hypothetical protein NP_890286.1 3975711 R 257310 CDS NP_890287.1 33602727 2659704 complement(3976224..3976823) 1 NC_002927.3 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; RNA polymerase sigma factor RpoE 3976823 sigE 2659704 sigE Bordetella bronchiseptica RB50 RNA polymerase sigma factor RpoE NP_890287.1 3976224 R 257310 CDS NP_890288.1 33602728 2661970 complement(3976820..3977320) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2438; integral membrane protein 3977320 2661970 BB3753 Bordetella bronchiseptica RB50 integral membrane protein NP_890288.1 3976820 R 257310 CDS NP_890289.1 33602729 2661693 complement(3977322..3978551) 1 NC_002927.3 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase II 3978551 fabF 2661693 fabF Bordetella bronchiseptica RB50 3-oxoacyl-ACP synthase II NP_890289.1 3977322 R 257310 CDS NP_890290.1 33602730 2659318 complement(3978741..3978980) 1 NC_002927.3 carries the fatty acid chain in fatty acid biosynthesis; acyl-carrier protein 3978980 acpP 2659318 acpP Bordetella bronchiseptica RB50 acyl-carrier protein NP_890290.1 3978741 R 257310 CDS NP_890291.1 33602731 2662115 complement(3979163..3979915) 1 NC_002927.3 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 3979915 fabG 2662115 fabG Bordetella bronchiseptica RB50 3-ketoacyl-ACP reductase NP_890291.1 3979163 R 257310 CDS NP_890292.1 33602732 2662046 complement(3979917..3980852) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2442; ACP S-malonyltransferase 3980852 fabD 2662046 fabD Bordetella bronchiseptica RB50 ACP S-malonyltransferase NP_890292.1 3979917 R 257310 CDS NP_890293.1 33602733 2662047 complement(3980934..3981923) 1 NC_002927.3 FabH; beta-ketoacyl-ACP synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-ACP synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 3981923 fabH 2662047 fabH Bordetella bronchiseptica RB50 3-oxoacyl-ACP synthase NP_890293.1 3980934 R 257310 CDS NP_890294.1 33602734 2662231 complement(3981920..3982978) 1 NC_002927.3 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX 3982978 2662231 BB3759 Bordetella bronchiseptica RB50 glycerol-3-phosphate acyltransferase PlsX NP_890294.1 3981920 R 257310 CDS NP_890295.1 33602735 2662232 complement(3983035..3983217) 1 NC_002927.3 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 3983217 rpmF 2662232 rpmF Bordetella bronchiseptica RB50 50S ribosomal protein L32 NP_890295.1 3983035 R 257310 CDS NP_890296.1 33602736 2662233 complement(3983269..3983862) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2446; hypothetical protein 3983862 2662233 BB3761 Bordetella bronchiseptica RB50 hypothetical protein NP_890296.1 3983269 R 257310 CDS NP_890297.1 33602737 2659252 3983971..3984570 1 NC_002927.3 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 3984570 maf 2659252 maf Bordetella bronchiseptica RB50 Maf-like protein NP_890297.1 3983971 D 257310 CDS NP_890298.1 33602738 2659253 3984567..3985277 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2448; hypothetical protein 3985277 2659253 BB3763 Bordetella bronchiseptica RB50 hypothetical protein NP_890298.1 3984567 D 257310 CDS NP_890299.1 33602739 2660692 3985279..3986106 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2449; hydrolase 3986106 2660692 BB3764 Bordetella bronchiseptica RB50 hydrolase NP_890299.1 3985279 D 257310 CDS NP_890300.1 33602740 2660693 complement(3986103..3986765) 1 NC_002927.3 in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY; sulfite oxidase activity not demonstrated; contains heme; sulfite oxidase subunit YedZ 3986765 2660693 BB3765 Bordetella bronchiseptica RB50 sulfite oxidase subunit YedZ NP_890300.1 3986103 R 257310 CDS NP_890301.1 33602741 2659504 complement(3986773..3987732) 1 NC_002927.3 in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ; sulfite oxidase subunit YedY 3987732 2659504 BB3766 Bordetella bronchiseptica RB50 sulfite oxidase subunit YedY NP_890301.1 3986773 R 257310 CDS NP_890302.1 33602742 2659505 complement(3987889..3988560) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0478; hydrolase 3988560 2659505 BB3767 Bordetella bronchiseptica RB50 hydrolase NP_890302.1 3987889 R 257310 CDS NP_890303.1 33602743 2661499 complement(3988563..3989528) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0477; ribosomal large subunit pseudouridine synthase C 3989528 rluC 2661499 rluC Bordetella bronchiseptica RB50 ribosomal large subunit pseudouridine synthase C NP_890303.1 3988563 R 257310 CDS NP_890304.1 33602744 2660955 3990036..3993176 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0475; ribonuclease E 3993176 rne 2660955 rne Bordetella bronchiseptica RB50 ribonuclease E NP_890304.1 3990036 D 257310 CDS NP_890305.1 33602745 2660956 complement(3993252..3994196) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0474; choloylglycine hydrolase 3994196 2660956 BB3770 Bordetella bronchiseptica RB50 choloylglycine hydrolase NP_890305.1 3993252 R 257310 CDS NP_890306.1 33602746 2660768 complement(3994618..3995154) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3592; lipoprotein 3995154 2660768 BB3771 Bordetella bronchiseptica RB50 lipoprotein NP_890306.1 3994618 R 257310 CDS NP_890307.1 33602747 2660769 complement(3995364..3996242) 1 NC_002927.3 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta 3996242 accD 2660769 accD Bordetella bronchiseptica RB50 acetyl-CoA carboxylase subunit beta NP_890307.1 3995364 R 257310 CDS NP_890308.1 33602748 2660770 complement(3996279..3997136) 1 NC_002927.3 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 3997136 trpA 2660770 trpA Bordetella bronchiseptica RB50 tryptophan synthase subunit alpha NP_890308.1 3996279 R 257310 CDS NP_890309.1 33602749 2659579 complement(3997140..3998339) 1 NC_002927.3 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 3998339 trpB 2659579 trpB Bordetella bronchiseptica RB50 tryptophan synthase subunit beta NP_890309.1 3997140 R 257310 CDS NP_890310.1 33602750 2661586 complement(3998449..3999600) 1 NC_002927.3 catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine; acetylornithine deacetylase 3999600 2661586 BB3775 Bordetella bronchiseptica RB50 acetylornithine deacetylase NP_890310.1 3998449 R 257310 CDS NP_890311.1 33602751 2661587 complement(3999677..4001890) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3587; GTP pyrophosphokinase 4001890 relA 2661587 relA Bordetella bronchiseptica RB50 GTP pyrophosphokinase NP_890311.1 3999677 R 257310 CDS NP_890312.1 33602752 2659872 4001974..4002807 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3586; hypothetical protein 4002807 2659872 BB3777 Bordetella bronchiseptica RB50 hypothetical protein NP_890312.1 4001974 D 257310 CDS NP_890313.1 33602753 2660588 4002804..4003313 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3585; hypothetical protein 4003313 2660588 BB3778 Bordetella bronchiseptica RB50 hypothetical protein NP_890313.1 4002804 D 257310 CDS NP_890314.1 33602754 2660589 complement(4003446..4003796) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3584; hypothetical protein 4003796 2660589 BB3779 Bordetella bronchiseptica RB50 hypothetical protein NP_890314.1 4003446 R 257310 CDS NP_890315.1 33602755 2659542 complement(4003848..4005065) 1 NC_002927.3 catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 4005065 pncB 2659542 pncB Bordetella bronchiseptica RB50 nicotinate phosphoribosyltransferase NP_890315.1 4003848 R 257310 CDS NP_890316.1 33602756 2659543 4005241..4005513 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3582; ferredoxin 4005513 2659543 BB3781 Bordetella bronchiseptica RB50 ferredoxin NP_890316.1 4005241 D 257310 CDS NP_890317.1 33602757 2661018 4005559..4006356 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3581; ferredoxin--NADP reductase 4006356 2661018 BB3782 Bordetella bronchiseptica RB50 ferredoxin--NADP reductase NP_890317.1 4005559 D 257310 CDS NP_890318.1 33602758 2661019 4006501..4007727 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3580; intracellular PHB depolymerase 4007727 2661019 BB3783 Bordetella bronchiseptica RB50 intracellular PHB depolymerase NP_890318.1 4006501 D 257310 CDS NP_890319.1 33602759 2661020 4007785..4008426 1 NC_002927.3 Involved in the electron transport chain; ferredoxin 4008426 2661020 BB3784 Bordetella bronchiseptica RB50 ferredoxin NP_890319.1 4007785 D 257310 CDS NP_890320.1 33602760 2659030 4008423..4009058 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3578; endonuclease III 4009058 nth 2659030 nth Bordetella bronchiseptica RB50 endonuclease III NP_890320.1 4008423 D 257310 CDS NP_890321.1 33602761 2662242 4009317..4010090 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3577; ABC transporter ATP-binding protein 4010090 2662242 BB3786 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_890321.1 4009317 D 257310 CDS NP_890322.1 33602762 2662243 4010087..4010797 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3576; ABC transporter ATP-binding protein 4010797 2662243 BB3787 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_890322.1 4010087 D 257310 CDS NP_890323.1 33602763 2659710 4010856..4012070 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3575; hypothetical protein 4012070 2659710 BB3788 Bordetella bronchiseptica RB50 hypothetical protein NP_890323.1 4010856 D 257310 CDS NP_890324.1 33602764 2659711 4012162..4013049 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3574; branched-chain amino acid transport permease 4013049 2659711 BB3789 Bordetella bronchiseptica RB50 branched-chain amino acid transport permease NP_890324.1 4012162 D 257310 CDS NP_890325.1 33602765 2662210 4013046..4014026 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3573; branched-chain amino acid transport permease 4014026 2662210 BB3790 Bordetella bronchiseptica RB50 branched-chain amino acid transport permease NP_890325.1 4013046 D 257310 CDS NP_890326.1 33602766 2661161 4014122..4015120 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3572; glycine/betaine ABC transporter substrate-binding protein 4015120 2661161 BB3791 Bordetella bronchiseptica RB50 glycine/betaine ABC transporter substrate-binding protein NP_890326.1 4014122 D 257310 CDS NP_890327.1 33602767 2660748 4015152..4015991 1 NC_002927.3 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; aminotransferase 4015991 2660748 BB3792 Bordetella bronchiseptica RB50 aminotransferase NP_890327.1 4015152 D 257310 CDS NP_890328.1 33602768 2660749 complement(4016038..4016790) 1 NC_002927.3 branched-chain amino acid transport system protein 4016790 2660749 BB3793 Bordetella bronchiseptica RB50 branched-chain amino acid transport system protein NP_890328.1 4016038 R 257310 CDS NP_890329.1 33602769 2659849 complement(4016787..4018625) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3570; branched-chain amino acid transport system protein 4018625 2659849 BB3794 Bordetella bronchiseptica RB50 branched-chain amino acid transport system protein NP_890329.1 4016787 R 257310 CDS NP_890330.1 33602770 2660943 complement(4018631..4019668) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3569; branched-chain amino acid transport system permease 4019668 2660943 BB3795 Bordetella bronchiseptica RB50 branched-chain amino acid transport system permease NP_890330.1 4018631 R 257310 CDS NP_890331.1 33602771 2660461 complement(4019830..4020993) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3568; hypothetical protein 4020993 2660461 BB3796 Bordetella bronchiseptica RB50 hypothetical protein NP_890331.1 4019830 R 257310 CDS NP_890332.1 33602772 2660462 complement(4021226..4021783) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3567; BioY family protein 4021783 2660462 BB3797 Bordetella bronchiseptica RB50 BioY family protein NP_890332.1 4021226 R 257310 CDS NP_890333.1 33602773 2661592 complement(4021827..4022420) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3566; cobalt transport protein 4022420 2661592 BB3798 Bordetella bronchiseptica RB50 cobalt transport protein NP_890333.1 4021827 R 257310 CDS NP_890334.1 33602774 2659573 complement(4022417..4023094) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3565; ABC transporter ATP-binding protein 4023094 2659573 BB3799 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_890334.1 4022417 R 257310 CDS NP_890335.1 33602775 2659826 4023146..4023547 1 NC_002927.3 this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress; methionine sulfoxide reductase B 4023547 msrB 2659826 msrB Bordetella bronchiseptica RB50 methionine sulfoxide reductase B NP_890335.1 4023146 D 257310 CDS NP_890336.1 33602776 2659827 4023544..4024113 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3563; intracellular septation protein 4024113 2659827 BB3801 Bordetella bronchiseptica RB50 intracellular septation protein NP_890336.1 4023544 D 257310 CDS NP_890337.1 33602777 2660664 4024135..4024419 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3562; BolA-like protein 4024419 2660664 BB3802 Bordetella bronchiseptica RB50 BolA-like protein NP_890337.1 4024135 D 257310 CDS NP_890338.1 33602778 2660665 4024448..4025224 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3561; peptidyl-prolyl cis-trans isomerase 4025224 2660665 BB3803 Bordetella bronchiseptica RB50 peptidyl-prolyl cis-trans isomerase NP_890338.1 4024448 D 257310 CDS NP_890339.1 33602779 2661129 complement(4025309..4027399) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3560; DNA ligase 4027399 ligA 2661129 ligA Bordetella bronchiseptica RB50 DNA ligase NP_890339.1 4025309 R 257310 CDS NP_890340.1 33602780 2660765 complement(4027399..4028457) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3559; hypothetical protein 4028457 2660765 BB3805 Bordetella bronchiseptica RB50 hypothetical protein NP_890340.1 4027399 R 257310 CDS NP_890341.1 33602781 2659589 complement(4028502..4032089) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3558; chromosome partition protein 4032089 2659589 BB3806 Bordetella bronchiseptica RB50 chromosome partition protein NP_890341.1 4028502 R 257310 CDS NP_890342.1 33602782 2659560 4032292..4033602 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3557; lysophospholipid transporter LplT 4033602 2659560 BB3807 Bordetella bronchiseptica RB50 lysophospholipid transporter LplT NP_890342.1 4032292 D 257310 CDS NP_890343.1 33602783 2661520 complement(4033621..4034349) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3556; bacteriophage-related DNA polymerase 4034349 2661520 BB3808 Bordetella bronchiseptica RB50 bacteriophage-related DNA polymerase NP_890343.1 4033621 R 257310 CDS NP_890344.1 33602784 2661521 complement(4034504..4035751) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3555; acetyltransferase 4035751 2661521 BB3809 Bordetella bronchiseptica RB50 acetyltransferase NP_890344.1 4034504 R 257310 CDS NP_890345.1 33602785 2662083 4035881..4036615 1 NC_002927.3 part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of ompF; also functions in regulation of other genes; forms dimers upon phosphorylation; osmolarity response regulator 4036615 ompR 2662083 ompR Bordetella bronchiseptica RB50 osmolarity response regulator NP_890345.1 4035881 D 257310 CDS NP_890346.1 33602786 2663913 4036620..4038044 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3553; sensor kinase 4038044 risS 2663913 risS Bordetella bronchiseptica RB50 sensor kinase NP_890346.1 4036620 D 257310 CDS NP_890347.1 33602787 2660038 4038107..4038655 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3552; alkyl hydroperoxide reductase 4038655 ahpC 2660038 ahpC Bordetella bronchiseptica RB50 alkyl hydroperoxide reductase NP_890347.1 4038107 D 257310 CDS NP_890348.1 33602788 2660039 4038711..4039229 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3551; antioxidant protein 4039229 ahpD 2660039 ahpD Bordetella bronchiseptica RB50 antioxidant protein NP_890348.1 4038711 D 257310 CDS NP_890349.1 33602789 2661981 complement(4039297..4039872) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3550; AraC family transcriptional regulator 4039872 2661981 BB3814 Bordetella bronchiseptica RB50 AraC family transcriptional regulator NP_890349.1 4039297 R 257310 CDS NP_890350.1 33602790 2659175 4040014..4041435 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3549; transporter 4041435 2659175 BB3815 Bordetella bronchiseptica RB50 transporter NP_890350.1 4040014 D 257310 CDS NP_890351.1 33602791 2660042 complement(4041444..4041932) 1 NC_002927.3 catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 4041932 ispF 2660042 ispF Bordetella bronchiseptica RB50 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase NP_890351.1 4041444 R 257310 CDS NP_890352.1 33602792 2660043 complement(4041929..4042612) 1 NC_002927.3 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 4042612 ispD 2660043 ispD Bordetella bronchiseptica RB50 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NP_890352.1 4041929 R 257310 CDS NP_890353.1 33602793 2658990 4042642..4046097 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0864; transcription-repair coupling factor 4046097 mfd 2658990 mfd Bordetella bronchiseptica RB50 transcription-repair coupling factor NP_890353.1 4042642 D 257310 CDS NP_890354.1 33602794 2661949 4046133..4046993 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0863; phosphoserine phosphatase 4046993 serB 2661949 serB Bordetella bronchiseptica RB50 phosphoserine phosphatase NP_890354.1 4046133 D 257310 CDS NP_890355.1 33602795 2661950 complement(4047132..4048049) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0862; LysR family transcriptional regulator 4048049 2661950 BB3820 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_890355.1 4047132 R 257310 CDS NP_890356.1 33602796 2660376 4048187..4049167 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0861; hypothetical protein 4049167 2660376 BB3821 Bordetella bronchiseptica RB50 hypothetical protein NP_890356.1 4048187 D 257310 CDS NP_890357.1 33602797 2661565 4049227..4051017 1 NC_002927.3 catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; catalytic; acetolactate synthase catalytic subunit 4051017 2661565 BB3822 Bordetella bronchiseptica RB50 acetolactate synthase catalytic subunit NP_890357.1 4049227 D 257310 CDS NP_890358.1 33602798 2660743 4051014..4051790 1 NC_002927.3 catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 4051790 fabG 2660743 fabG Bordetella bronchiseptica RB50 3-ketoacyl-ACP reductase NP_890358.1 4051014 D 257310 CDS NP_890359.1 33602799 2660998 complement(4051800..4052318) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0858; GNAT family acetyltransferase 4052318 2660998 BB3824 Bordetella bronchiseptica RB50 GNAT family acetyltransferase NP_890359.1 4051800 R 257310 CDS NP_890360.1 33602800 2660614 complement(4052430..4054700) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0857; TonB-dependent receptor 4054700 bfrE 2660614 bfrE Bordetella bronchiseptica RB50 TonB-dependent receptor NP_890360.1 4052430 R 257310 CDS NP_890361.1 33602801 2660615 complement(4054912..4057143) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0856; TonB-dependent receptor 4057143 bfrD 2660615 bfrD Bordetella bronchiseptica RB50 TonB-dependent receptor NP_890361.1 4054912 R 257310 CDS NP_890362.1 33602802 2659940 complement(4057444..4057773) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0855; hypothetical protein 4057773 2659940 BB3827 Bordetella bronchiseptica RB50 hypothetical protein NP_890362.1 4057444 R 257310 CDS NP_890363.1 33602803 2659941 complement(4057790..4059274) 1 NC_002927.3 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit N 4059274 nuoN 2659941 nuoN Bordetella bronchiseptica RB50 NADH dehydrogenase subunit N NP_890363.1 4057790 R 257310 CDS NP_890364.1 33602804 2659513 complement(4059285..4060787) 1 NC_002927.3 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit M 4060787 nuoM 2659513 nuoM Bordetella bronchiseptica RB50 NADH dehydrogenase subunit M NP_890364.1 4059285 R 257310 CDS NP_890365.1 33602805 2659545 complement(4060784..4062796) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0852; NADH-ubiquinone oxidoreductase, chain L 4062796 nuoL 2659545 nuoL Bordetella bronchiseptica RB50 NADH-ubiquinone oxidoreductase, chain L NP_890365.1 4060784 R 257310 CDS NP_890366.1 33602806 2660680 complement(4062814..4063122) 1 NC_002927.3 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit K 4063122 nuoK 2660680 nuoK Bordetella bronchiseptica RB50 NADH dehydrogenase subunit K NP_890366.1 4062814 R 257310 CDS NP_890367.1 33602807 2660681 complement(4063119..4063766) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0850; NADH-ubiquinone oxidoreductase, chain J 4063766 nuoJ 2660681 nuoJ Bordetella bronchiseptica RB50 NADH-ubiquinone oxidoreductase, chain J NP_890367.1 4063119 R 257310 CDS NP_890368.1 33602808 2661052 complement(4063784..4064272) 1 NC_002927.3 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 4064272 nuoI 2661052 nuoI Bordetella bronchiseptica RB50 NADH dehydrogenase subunit I NP_890368.1 4063784 R 257310 CDS NP_890369.1 33602809 2660393 complement(4064294..4065367) 1 NC_002927.3 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H 4065367 nuoH 2660393 nuoH Bordetella bronchiseptica RB50 NADH dehydrogenase subunit H NP_890369.1 4064294 R 257310 CDS NP_890370.1 33602810 2658980 complement(4065367..4067694) 1 NC_002927.3 Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit G 4067694 nuoG 2658980 nuoG Bordetella bronchiseptica RB50 NADH dehydrogenase subunit G NP_890370.1 4065367 R 257310 CDS NP_890371.1 33602811 2663003 complement(4067710..4069077) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0846; respiratory-chain NADH dehydrogenase, 51 kDa subunit 4069077 nuoF 2663003 nuoF Bordetella bronchiseptica RB50 respiratory-chain NADH dehydrogenase, 51 kDa subunit NP_890371.1 4067710 R 257310 CDS NP_890372.1 33602812 2663004 complement(4069074..4069568) 1 NC_002927.3 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit E 4069568 nuoE 2663004 nuoE Bordetella bronchiseptica RB50 NADH dehydrogenase subunit E NP_890372.1 4069074 R 257310 CDS NP_890373.1 33602813 2663890 complement(4069614..4070870) 1 NC_002927.3 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit D 4070870 nuoD 2663890 nuoD Bordetella bronchiseptica RB50 NADH dehydrogenase subunit D NP_890373.1 4069614 R 257310 CDS NP_890374.2 161609262 2660299 complement(4070873..4071496) 1 NC_002927.3 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit C 4071496 nuoC 2660299 nuoC Bordetella bronchiseptica RB50 NADH dehydrogenase subunit C NP_890374.2 4070873 R 257310 CDS NP_890375.1 33602815 2660300 complement(4071571..4072047) 1 NC_002927.3 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 4072047 nuoB 2660300 nuoB Bordetella bronchiseptica RB50 NADH dehydrogenase subunit B NP_890375.1 4071571 R 257310 CDS NP_890376.1 33602816 2661062 complement(4072084..4072443) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0841; NADH-ubiquinone oxidoreductase chain 3 4072443 nuoA 2661062 nuoA Bordetella bronchiseptica RB50 NADH-ubiquinone oxidoreductase chain 3 NP_890376.1 4072084 R 257310 CDS NP_890377.1 33602817 2660513 complement(4072632..4073798) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0840; outer membrane porin protein precursor 4073798 2660513 BB3842 Bordetella bronchiseptica RB50 outer membrane porin protein precursor NP_890377.1 4072632 R 257310 CDS NP_890378.1 33602818 2660907 4074253..4074864 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0838; TetR family transcriptional regulator 4074864 2660907 BB3843 Bordetella bronchiseptica RB50 TetR family transcriptional regulator NP_890378.1 4074253 D 257310 CDS NP_890379.1 33602819 2660908 4074866..4075300 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0837; hypothetical protein 4075300 2660908 BB3844 Bordetella bronchiseptica RB50 hypothetical protein NP_890379.1 4074866 D 257310 CDS NP_890380.1 33602820 2660909 4075297..4075731 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0836; hypothetical protein 4075731 2660909 BB3845 Bordetella bronchiseptica RB50 hypothetical protein NP_890380.1 4075297 D 257310 CDS NP_890381.1 33602821 2660910 complement(4075715..4076518) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0835; hypothetical protein 4076518 2660910 BB3846 Bordetella bronchiseptica RB50 hypothetical protein NP_890381.1 4075715 R 257310 CDS NP_890382.1 33602822 2660473 complement(4076535..4077350) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0834; DNA repair exonuclease 4077350 2660473 BB3847 Bordetella bronchiseptica RB50 DNA repair exonuclease NP_890382.1 4076535 R 257310 CDS NP_890383.1 33602823 2659594 complement(4077347..4078306) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0833; hypothetical protein 4078306 2659594 BB3848 Bordetella bronchiseptica RB50 hypothetical protein NP_890383.1 4077347 R 257310 CDS NP_890384.1 33602824 2659595 complement(4078351..4079247) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0832; LysR family transcriptional regulator 4079247 2659595 BB3849 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_890384.1 4078351 R 257310 CDS NP_890385.1 33602825 2659427 complement(4079275..4081233) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0831; high-affinity choline transport protein 4081233 betT 2659427 betT Bordetella bronchiseptica RB50 high-affinity choline transport protein NP_890385.1 4079275 R 257310 CDS NP_890386.1 33602826 2661355 4081438..4082106 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0829; transcriptional regulator 4082106 2661355 BB3851 Bordetella bronchiseptica RB50 transcriptional regulator NP_890386.1 4081438 D 257310 CDS NP_890387.1 33602827 2661356 4082230..4083336 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0828; hemolysin D 4083336 2661356 BB3852 Bordetella bronchiseptica RB50 hemolysin D NP_890387.1 4082230 D 257310 CDS NP_890388.1 33602828 2659798 4083349..4086462 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0827; integral membrane component of multidrug efflux system 4086462 2659798 BB3853 Bordetella bronchiseptica RB50 integral membrane component of multidrug efflux system NP_890388.1 4083349 D 257310 CDS NP_890389.1 33602829 2659788 4086459..4087922 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0826; outer membrane component of multidrug efflux system 4087922 2659788 BB3854 Bordetella bronchiseptica RB50 outer membrane component of multidrug efflux system NP_890389.1 4086459 D 257310 CDS NP_890390.1 33602830 2661327 4087937..4088608 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0825; hypothetical protein 4088608 2661327 BB3855 Bordetella bronchiseptica RB50 hypothetical protein NP_890390.1 4087937 D 257310 CDS NP_890391.1 33602831 2661328 complement(4088652..4089146) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0824; azurin 4089146 2661328 BB3856 Bordetella bronchiseptica RB50 azurin NP_890391.1 4088652 R 257310 CDS NP_890392.1 33602832 2661388 complement(4089287..4089934) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0823; transcriptional regulator 4089934 2661388 BB3857 Bordetella bronchiseptica RB50 transcriptional regulator NP_890392.1 4089287 R 257310 CDS NP_890393.1 33602833 2661389 4090038..4092086 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0822; hydantoin utilization protein A 4092086 hyuA 2661389 hyuA Bordetella bronchiseptica RB50 hydantoin utilization protein A NP_890393.1 4090038 D 257310 CDS NP_890394.1 33602834 2661605 4092083..4094095 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0821; hydantoin utilization protein B 4094095 hyuB 2661605 hyuB Bordetella bronchiseptica RB50 hydantoin utilization protein B NP_890394.1 4092083 D 257310 CDS NP_890395.1 33602835 2661606 4094121..4095455 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0820; hypothetical protein 4095455 2661606 BB3860 Bordetella bronchiseptica RB50 hypothetical protein NP_890395.1 4094121 D 257310 CDS NP_890396.1 33602836 2659522 4095564..4096556 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0819; hypothetical protein 4096556 2659522 BB3861 Bordetella bronchiseptica RB50 hypothetical protein NP_890396.1 4095564 D 257310 CDS NP_890397.1 33602837 2659523 complement(4096623..4098707) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0818; Similar to Pseudomonas aeruginosa probable thiosulfate sulfurtransferase pa2603 SWALL:Q9I0N4 (EMBL:AE004689) (527 aa) fasta scores: E(): 3.2e-45, 40.31% id in 516 aa, and to Agrobacterium tumefaciens hypothetical protein atu6089 or agr_pti_bx104 SWALL:Q8U646 (EMBL:AE009427) (395 aa) fasta scores: E(): 1.4e-30, 41.66% id in 312 aa; hypothetical protein 4098707 2659523 BB3862 Bordetella bronchiseptica RB50 hypothetical protein NP_890397.1 4096623 R 257310 CDS NP_890398.1 33602838 2660409 complement(4098732..4099742) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0817; hypothetical protein 4099742 2660409 BB3863 Bordetella bronchiseptica RB50 hypothetical protein NP_890398.1 4098732 R 257310 CDS NP_890399.1 33602839 2660410 complement(4099836..4100837) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0816; hypothetical protein 4100837 2660410 BB3864 Bordetella bronchiseptica RB50 hypothetical protein NP_890399.1 4099836 R 257310 CDS NP_890400.1 33602840 2660411 complement(4100871..4102112) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0815; cystathionine beta-lyase 4102112 metC 2660411 metC Bordetella bronchiseptica RB50 cystathionine beta-lyase NP_890400.1 4100871 R 257310 CDS NP_890401.1 33602841 2660756 4102193..4103116 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0814; LysR family transcriptional regulator 4103116 2660756 BB3866 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_890401.1 4102193 D 257310 CDS NP_890402.1 33602842 2660487 4103194..4104018 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0813; short-chain dehydrogenase 4104018 2660487 BB3867 Bordetella bronchiseptica RB50 short-chain dehydrogenase NP_890402.1 4103194 D 257310 CDS NP_890403.1 33602843 2660488 complement(4104157..4105140) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0810; hypothetical protein 4105140 2660488 BB3868 Bordetella bronchiseptica RB50 hypothetical protein NP_890403.1 4104157 R 257310 CDS NP_890404.1 33602844 2661133 complement(4105199..4106692) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0809; argininosuccinate lyase 4106692 argH 2661133 argH Bordetella bronchiseptica RB50 argininosuccinate lyase NP_890404.1 4105199 R 257310 CDS NP_890405.1 33602845 2661004 complement(4106740..4108128) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0808; hypothetical protein 4108128 2661004 BB3870 Bordetella bronchiseptica RB50 hypothetical protein NP_890405.1 4106740 R 257310 CDS NP_890406.1 33602846 2661005 complement(4108159..4109148) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0807; hypothetical protein 4109148 2661005 BB3871 Bordetella bronchiseptica RB50 hypothetical protein NP_890406.1 4108159 R 257310 CDS NP_890407.1 33602847 2661211 complement(4109259..4110491) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0806; methylaspartate ammonia-lyase 4110491 2661211 BB3872 Bordetella bronchiseptica RB50 methylaspartate ammonia-lyase NP_890407.1 4109259 R 257310 CDS NP_890408.1 33602848 2661212 4110773..4111573 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0805; transcriptional regulator 4111573 2661212 BB3873 Bordetella bronchiseptica RB50 transcriptional regulator NP_890408.1 4110773 D 257310 CDS NP_890409.1 33602849 2662057 complement(4111596..4113827) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0804; high-affinity choline transport protein 4113827 betT 2662057 betT Bordetella bronchiseptica RB50 high-affinity choline transport protein NP_890409.1 4111596 R 257310 CDS NP_890410.1 33602850 2661286 complement(4114691..4115155) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0802; preprotein translocase subunit SecG 4115155 secG 2661286 secG Bordetella bronchiseptica RB50 preprotein translocase subunit SecG NP_890410.1 4114691 R 257310 CDS NP_890411.1 33602851 2658999 complement(4115177..4115923) 1 NC_002927.3 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 4115923 tpiA 2658999 tpiA Bordetella bronchiseptica RB50 triosephosphate isomerase NP_890411.1 4115177 R 257310 CDS NP_890412.1 33602852 2659680 complement(4116068..4117045) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0800; zinc-binding dehydrogenase 4117045 2659680 BB3877 Bordetella bronchiseptica RB50 zinc-binding dehydrogenase NP_890412.1 4116068 R 257310 CDS NP_890413.1 33602853 2659681 4117679..4118290 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0799; hypothetical protein 4118290 2659681 BB3878 Bordetella bronchiseptica RB50 hypothetical protein NP_890413.1 4117679 D 257310 CDS NP_890414.1 33602854 2662855 complement(4118284..4119501) 1 NC_002927.3 catalyzes the formation of 2-oxobutanoate from L-threonine; threonine dehydratase 4119501 tdcB 2662855 tdcB Bordetella bronchiseptica RB50 threonine dehydratase NP_890414.1 4118284 R 257310 CDS NP_890415.1 33602855 2662856 complement(4119540..4120259) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0796; lipoprotein 4120259 2662856 BB3880 Bordetella bronchiseptica RB50 lipoprotein NP_890415.1 4119540 R 257310 CDS NP_890416.1 33602856 2662866 complement(4120380..4122539) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0795; polynucleotide phosphorylase/polyadenylase 4122539 pnp 2662866 pnp Bordetella bronchiseptica RB50 polynucleotide phosphorylase/polyadenylase NP_890416.1 4120380 R 257310 CDS NP_890417.1 33602857 2663337 complement(4122630..4122899) 1 NC_002927.3 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 4122899 rpsO 2663337 rpsO Bordetella bronchiseptica RB50 30S ribosomal protein S15 NP_890417.1 4122630 R 257310 CDS NP_890418.1 33602858 2663817 4123193..4123720 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0793; lipoprotein 4123720 2663817 BB3883 Bordetella bronchiseptica RB50 lipoprotein NP_890418.1 4123193 D 257310 CDS NP_890419.1 33602859 2663818 complement(4123739..4124518) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0792; CDP-diacylglycerol--serine O-phosphatidyltransferase 4124518 pssA 2663818 pssA Bordetella bronchiseptica RB50 CDP-diacylglycerol--serine O-phosphatidyltransferase NP_890419.1 4123739 R 257310 CDS NP_890420.1 33602860 2663891 complement(4124686..4125702) 1 NC_002927.3 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 4125702 ilvC 2663891 ilvC Bordetella bronchiseptica RB50 ketol-acid reductoisomerase NP_890420.1 4124686 R 257310 CDS NP_890421.1 33602861 2660921 complement(4125775..4126266) 1 NC_002927.3 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit 4126266 ilvH 2660921 ilvH Bordetella bronchiseptica RB50 acetolactate synthase 3 regulatory subunit NP_890421.1 4125775 R 257310 CDS NP_890422.1 33602862 2660605 complement(4126277..4127992) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0789; acetolactate synthase large subunit 4127992 ilvI 2660605 ilvI Bordetella bronchiseptica RB50 acetolactate synthase large subunit NP_890422.1 4126277 R 257310 CDS NP_890423.1 33602863 2660993 4128462..4130690 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0787+BP2450; hypothetical protein 4130690 2660993 BB3888 Bordetella bronchiseptica RB50 hypothetical protein NP_890423.1 4128462 D 257310 CDS NP_890424.1 33602864 2660994 complement(4130697..4131938) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2451; membrane transport protein 4131938 2660994 BB3889 Bordetella bronchiseptica RB50 membrane transport protein NP_890424.1 4130697 R 257310 CDS NP_890425.1 33602865 2659546 complement(4131950..4132723) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2452; hypothetical protein 4132723 2659546 BB3890 Bordetella bronchiseptica RB50 hypothetical protein NP_890425.1 4131950 R 257310 CDS NP_890426.1 33602866 2659547 complement(4132750..4133532) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2454; oxidoreductase 4133532 2659547 BB3891 Bordetella bronchiseptica RB50 oxidoreductase NP_890426.1 4132750 R 257310 CDS NP_890427.1 33602867 2661378 complement(4133621..4134847) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2455; membrane efflux protein 4134847 2661378 BB3892 Bordetella bronchiseptica RB50 membrane efflux protein NP_890427.1 4133621 R 257310 CDS NP_890428.1 33602868 2661345 4135574..4136959 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2456; alcaligin biosynthesis enzyme 4136959 alcA 2661345 alcA Bordetella bronchiseptica RB50 alcaligin biosynthesis enzyme NP_890428.1 4135574 D 257310 CDS NP_890429.1 33602869 2661346 4136978..4137583 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2457; alcaligin biosynthesis protein 4137583 alcB 2661346 alcB Bordetella bronchiseptica RB50 alcaligin biosynthesis protein NP_890429.1 4136978 D 257310 CDS NP_890430.1 33602870 2661347 4137580..4139436 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2458; alcaligin biosynthesis protein 4139436 alcC 2661347 alcC Bordetella bronchiseptica RB50 alcaligin biosynthesis protein NP_890430.1 4137580 D 257310 CDS NP_890431.1 33602871 2661348 4139433..4140233 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2459; hypothetical protein 4140233 alcD 2661348 alcD Bordetella bronchiseptica RB50 hypothetical protein NP_890431.1 4139433 D 257310 CDS NP_890432.1 33602872 2660395 4140248..4141456 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2460; iron-sulfur protein 4141456 alcE 2660395 alcE Bordetella bronchiseptica RB50 iron-sulfur protein NP_890432.1 4140248 D 257310 CDS NP_890433.1 33602873 2660396 4141509..4142483 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2461; transcriptional regulator 4142483 alcR 2660396 alcR Bordetella bronchiseptica RB50 transcriptional regulator NP_890433.1 4141509 D 257310 CDS NP_890434.1 33602874 2661373 4142606..4143829 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2462; drug resistance translocase 4143829 bcr 2661373 bcr Bordetella bronchiseptica RB50 drug resistance translocase NP_890434.1 4142606 D 257310 CDS NP_890435.1 33602875 2659471 4143941..4146145 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2463; ferric alcaligin siderophore receptor 4146145 fauA 2659471 fauA Bordetella bronchiseptica RB50 ferric alcaligin siderophore receptor NP_890435.1 4143941 D 257310 CDS NP_890436.1 33602876 2659472 4146440..4147099 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2464; membrane efflux protein 4147099 mar 2659472 mar Bordetella bronchiseptica RB50 membrane efflux protein NP_890436.1 4146440 D 257310 CDS NP_890437.1 33602877 2661408 4147652..4148407 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2465; hypothetical protein 4148407 2661408 BB3903 Bordetella bronchiseptica RB50 hypothetical protein NP_890437.1 4147652 D 257310 CDS NP_890438.1 33602878 2660572 complement(4148423..4148584) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2466; hypothetical protein 4148584 2660572 BB3904 Bordetella bronchiseptica RB50 hypothetical protein NP_890438.1 4148423 R 257310 CDS NP_890439.1 33602879 2660573 4148753..4149268 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2467; hypothetical protein 4149268 2660573 BB3905 Bordetella bronchiseptica RB50 hypothetical protein NP_890439.1 4148753 D 257310 CDS NP_890440.1 33602880 2660574 4149541..4149858 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2468; virulence protein 4149858 vrg-6 2660574 vrg-6 Bordetella bronchiseptica RB50 virulence protein NP_890440.1 4149541 D 257310 CDS NP_890441.1 33602881 2660698 complement(4150047..4150295) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2469; hypothetical protein 4150295 2660698 BB3907 Bordetella bronchiseptica RB50 hypothetical protein NP_890441.1 4150047 R 257310 CDS NP_890442.1 33602882 2660699 complement(4150574..4151929) 1 NC_002927.3 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 4151929 2660699 BB3908 Bordetella bronchiseptica RB50 seryl-tRNA synthetase NP_890442.1 4150574 R 257310 CDS NP_890443.1 33602883 2661034 complement(4151976..4153355) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2471; recombination factor protein RarA 4153355 2661034 BB3909 Bordetella bronchiseptica RB50 recombination factor protein RarA NP_890443.1 4151976 R 257310 CDS NP_890444.1 33602884 2662005 complement(4153418..4154050) 1 NC_002927.3 participates with LolB in the incorporation of lipoprotein into the outer membrane; outer-membrane lipoprotein carrier protein 4154050 lolA 2662005 lolA Bordetella bronchiseptica RB50 outer-membrane lipoprotein carrier protein NP_890444.1 4153418 R 257310 CDS NP_890445.1 33602885 2662006 complement(4154050..4156410) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2473; cell division protein 4156410 ftsK 2662006 ftsK Bordetella bronchiseptica RB50 cell division protein NP_890445.1 4154050 R 257310 CDS NP_890446.1 33602886 2659287 4156452..4157411 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2474; thioredoxin reductase 4157411 trxB 2659287 trxB Bordetella bronchiseptica RB50 thioredoxin reductase NP_890446.1 4156452 D 257310 CDS NP_890447.1 33602887 2659021 4157449..4158084 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2475; hypothetical protein 4158084 2659021 BB3913 Bordetella bronchiseptica RB50 hypothetical protein NP_890447.1 4157449 D 257310 CDS NP_890448.1 33602888 2659022 4158081..4158413 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2476; mebrane transport protein 4158413 2659022 BB3914 Bordetella bronchiseptica RB50 mebrane transport protein NP_890448.1 4158081 D 257310 CDS NP_890449.1 33602889 2658982 complement(4158427..4160493) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2478; membrane transport protein 4160493 2658982 BB3915 Bordetella bronchiseptica RB50 membrane transport protein NP_890449.1 4158427 R 257310 CDS NP_890450.1 33602890 2659736 complement(4160493..4160765) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2479; integral membrane protein 4160765 2659736 BB3916 Bordetella bronchiseptica RB50 integral membrane protein NP_890450.1 4160493 R 257310 CDS NP_890451.1 33602891 2663924 4161548..4163332 1 NC_002927.3 catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit A 4163332 kdpA 2663924 kdpA Bordetella bronchiseptica RB50 potassium-transporting ATPase subunit A NP_890451.1 4161548 D 257310 CDS NP_890452.1 33602892 2663925 4163356..4165521 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2481; potassium-transporting ATPase B chain 4165521 kdpB 2663925 kdpB Bordetella bronchiseptica RB50 potassium-transporting ATPase B chain NP_890452.1 4163356 D 257310 CDS NP_890453.1 33602893 2661203 4165532..4166131 1 NC_002927.3 One of the components of the high-affinity ATP-driven potassium transport (or KDP)system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex; potassium-transporting ATPase subunit C 4166131 kdpC 2661203 kdpC Bordetella bronchiseptica RB50 potassium-transporting ATPase subunit C NP_890453.1 4165532 D 257310 CDS NP_890454.1 33602894 2660356 4166149..4168944 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2483; two component sensor protein 4168944 kdpD 2660356 kdpD Bordetella bronchiseptica RB50 two component sensor protein NP_890454.1 4166149 D 257310 CDS NP_890455.1 33602895 2660822 4168951..4169646 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2484; two component system transcriptional regulatory protein 4169646 kdpE 2660822 kdpE Bordetella bronchiseptica RB50 two component system transcriptional regulatory protein NP_890455.1 4168951 D 257310 CDS NP_890456.1 33602896 2660823 complement(4169655..4170905) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2486; hypothetical protein 4170905 2660823 BB3922 Bordetella bronchiseptica RB50 hypothetical protein NP_890456.1 4169655 R 257310 CDS NP_890457.1 33602897 2660370 complement(4171055..4172035) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2487; hypothetical protein 4172035 2660370 BB3923 Bordetella bronchiseptica RB50 hypothetical protein NP_890457.1 4171055 R 257310 CDS NP_890458.1 33602898 2660371 complement(4172234..4173490) 1 NC_002927.3 Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase 4173490 icd 2660371 icd Bordetella bronchiseptica RB50 isocitrate dehydrogenase NP_890458.1 4172234 R 257310 CDS NP_890459.1 33602899 2660780 4173693..4174118 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2489; hypothetical protein 4174118 2660780 BB3925 Bordetella bronchiseptica RB50 hypothetical protein NP_890459.1 4173693 D 257310 CDS NP_890460.1 33602900 2660781 complement(4174169..4174531) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2490; cytochrome 4174531 2660781 BB3926 Bordetella bronchiseptica RB50 cytochrome NP_890460.1 4174169 R 257310 CDS NP_890461.1 33602901 2660621 complement(4174544..4174897) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2491; cytochrome 4174897 2660621 BB3927 Bordetella bronchiseptica RB50 cytochrome NP_890461.1 4174544 R 257310 CDS NP_890462.1 33602902 2659470 4175058..4175945 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2493; ATP-binding protein 4175945 2659470 BB3928 Bordetella bronchiseptica RB50 ATP-binding protein NP_890462.1 4175058 D 257310 CDS NP_890463.1 33602903 2661465 4175967..4177139 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2494; hypothetical protein 4177139 2661465 BB3929 Bordetella bronchiseptica RB50 hypothetical protein NP_890463.1 4175967 D 257310 CDS NP_890464.1 33602904 2661466 complement(4177143..4177697) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2495; hypothetical protein 4177697 2661466 BB3930 Bordetella bronchiseptica RB50 hypothetical protein NP_890464.1 4177143 R 257310 CDS NP_890465.1 33602905 2661467 complement(4177735..4178109) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2496; hypothetical protein 4178109 2661467 BB3931 Bordetella bronchiseptica RB50 hypothetical protein NP_890465.1 4177735 R 257310 CDS NP_890466.1 33602906 2659954 4178442..4181192 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2497; zinc protease 4181192 2659954 BB3932 Bordetella bronchiseptica RB50 zinc protease NP_890466.1 4178442 D 257310 CDS NP_890467.1 33602907 2659955 complement(4181361..4182482) 1 NC_002927.3 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ 4182482 dnaJ 2659955 dnaJ Bordetella bronchiseptica RB50 chaperone protein DnaJ NP_890467.1 4181361 R 257310 CDS NP_890468.1 33602908 2659867 complement(4182583..4184508) 1 NC_002927.3 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 4184508 dnaK 2659867 dnaK Bordetella bronchiseptica RB50 molecular chaperone DnaK NP_890468.1 4182583 R 257310 CDS NP_890469.1 33602909 2659942 complement(4184599..4184979) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2500; thioredoxin 4184979 2659942 BB3935 Bordetella bronchiseptica RB50 thioredoxin NP_890469.1 4184599 R 257310 CDS NP_890470.1 33602910 2659943 complement(4184987..4185541) 1 NC_002927.3 with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE 4185541 2659943 BB3936 Bordetella bronchiseptica RB50 heat shock protein GrpE NP_890470.1 4184987 R 257310 CDS NP_890471.1 33602911 2659944 complement(4185683..4185925) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2502; hypothetical protein 4185925 2659944 BB3937 Bordetella bronchiseptica RB50 hypothetical protein NP_890471.1 4185683 R 257310 CDS NP_890472.1 33602912 2661349 complement(4186007..4187095) 1 NC_002927.3 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 4187095 hemH 2661349 hemH Bordetella bronchiseptica RB50 ferrochelatase NP_890472.1 4186007 R 257310 CDS NP_890473.1 33602913 2661350 complement(4187153..4188157) 1 NC_002927.3 Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor 4188157 hrcA 2661350 hrcA Bordetella bronchiseptica RB50 heat-inducible transcription repressor NP_890473.1 4187153 R 257310 CDS NP_890474.1 33602914 2660754 4188272..4189171 1 NC_002927.3 catalyzes the phosphorylation of NAD to NADP; NAD(+)/NADH kinase family protein 4189171 ppnK 2660754 ppnK Bordetella bronchiseptica RB50 NAD(+)/NADH kinase family protein NP_890474.1 4188272 D 257310 CDS NP_890475.1 33602915 2660755 4189187..4190848 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2506; DNA repair protein 4190848 2660755 BB3941 Bordetella bronchiseptica RB50 DNA repair protein NP_890475.1 4189187 D 257310 CDS NP_890476.1 33602916 2659456 complement(4190923..4191342) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2507; ferric ion uptake regulator 4191342 fur 2659456 fur Bordetella bronchiseptica RB50 ferric ion uptake regulator NP_890476.1 4190923 R 257310 CDS NP_890477.1 33602917 2659457 4191493..4192041 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2508; outer membrane lipoprotein 4192041 omlA 2659457 omlA Bordetella bronchiseptica RB50 outer membrane lipoprotein NP_890477.1 4191493 D 257310 CDS NP_890478.1 33602918 2660417 4192042..4192851 1 NC_002927.3 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 4192851 dapB 2660417 dapB Bordetella bronchiseptica RB50 dihydrodipicolinate reductase NP_890478.1 4192042 D 257310 CDS NP_890479.1 33602919 2660802 complement(4192888..4193949) 1 NC_002927.3 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 4193949 murB 2660802 murB Bordetella bronchiseptica RB50 UDP-N-acetylenolpyruvoylglucosamine reductase NP_890479.1 4192888 R 257310 CDS NP_890480.1 33602920 2660868 complement(4194368..4195600) 1 NC_002927.3 hypothetical protein 4195600 2660868 BB3946 Bordetella bronchiseptica RB50 hypothetical protein NP_890480.1 4194368 R 257310 CDS NP_890481.1 33602921 2660869 complement(4195679..4196134) 1 NC_002927.3 transcriptional regulator 4196134 2660869 BB3947 Bordetella bronchiseptica RB50 transcriptional regulator NP_890481.1 4195679 R 257310 CDS NP_890482.1 33602922 2660870 complement(4196164..4197051) 1 NC_002927.3 citrate lyase 4197051 citE 2660870 citE Bordetella bronchiseptica RB50 citrate lyase NP_890482.1 4196164 R 257310 CDS NP_890483.1 33602923 2662134 complement(4197204..4198007) 1 NC_002927.3 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 4198007 2662134 BB3949 Bordetella bronchiseptica RB50 enoyl-CoA hydratase NP_890483.1 4197204 R 257310 CDS NP_890484.1 33602924 2662135 complement(4198058..4199065) 1 NC_002927.3 hypothetical protein 4199065 2662135 BB3950 Bordetella bronchiseptica RB50 hypothetical protein NP_890484.1 4198058 R 257310 CDS NP_890485.1 33602925 2663910 complement(4199387..4200355) 1 NC_002927.3 transcriptional regulator 4200355 2663910 BB3951 Bordetella bronchiseptica RB50 transcriptional regulator NP_890485.1 4199387 R 257310 CDS NP_890486.1 33602926 2659028 4200746..4202122 1 NC_002927.3 inner membrane protein 4202122 2659028 BB3952 Bordetella bronchiseptica RB50 inner membrane protein NP_890486.1 4200746 D 257310 CDS NP_890487.1 33602927 2659029 4202119..4203051 1 NC_002927.3 oxidoreductase 4203051 2659029 BB3953 Bordetella bronchiseptica RB50 oxidoreductase NP_890487.1 4202119 D 257310 CDS NP_890488.1 33602928 2659632 4203328..4204356 1 NC_002927.3 C4-dicarboxylate ABC transporter substrate-binding protein 4204356 2659632 BB3954 Bordetella bronchiseptica RB50 C4-dicarboxylate ABC transporter substrate-binding protein NP_890488.1 4203328 D 257310 CDS NP_890489.1 33602929 2659633 4204353..4204898 1 NC_002927.3 inner membrane protein 4204898 2659633 BB3955 Bordetella bronchiseptica RB50 inner membrane protein NP_890489.1 4204353 D 257310 CDS NP_890490.1 33602930 2660005 4204895..4206169 1 NC_002927.3 inner membrane protein 4206169 2660005 BB3956 Bordetella bronchiseptica RB50 inner membrane protein NP_890490.1 4204895 D 257310 CDS NP_890491.1 33602931 2663906 4206194..4206955 1 NC_002927.3 transcriptional regulator 4206955 2663906 BB3957 Bordetella bronchiseptica RB50 transcriptional regulator NP_890491.1 4206194 D 257310 CDS NP_890492.1 33602932 2663907 4207054..4207854 1 NC_002927.3 aldolase 4207854 2663907 BB3958 Bordetella bronchiseptica RB50 aldolase NP_890492.1 4207054 D 257310 CDS NP_890493.1 33602933 2663908 4207881..4208786 1 NC_002927.3 hypothetical protein 4208786 2663908 BB3959 Bordetella bronchiseptica RB50 hypothetical protein NP_890493.1 4207881 D 257310 CDS NP_890494.1 33602934 2659393 4208893..4209639 1 NC_002927.3 inner membrane protein 4209639 2659393 BB3960 Bordetella bronchiseptica RB50 inner membrane protein NP_890494.1 4208893 D 257310 CDS NP_890495.1 33602935 2659394 4209726..4210541 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3110; MerR family transcriptional regulator 4210541 2659394 BB3961 Bordetella bronchiseptica RB50 MerR family transcriptional regulator NP_890495.1 4209726 D 257310 CDS NP_890496.1 33602936 2661297 4210674..4212113 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3109; hypothetical protein 4212113 2661297 BB3962 Bordetella bronchiseptica RB50 hypothetical protein NP_890496.1 4210674 D 257310 CDS NP_890497.1 33602937 2661298 4212127..4212468 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3108; hypothetical protein 4212468 2661298 BB3963 Bordetella bronchiseptica RB50 hypothetical protein NP_890497.1 4212127 D 257310 CDS NP_890498.1 33602938 2661299 4212523..4214280 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3107; gamma-glutamyltranspeptidase 4214280 2661299 BB3964 Bordetella bronchiseptica RB50 gamma-glutamyltranspeptidase NP_890498.1 4212523 D 257310 CDS NP_890499.1 33602939 2660178 4214330..4215340 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3106; hypothetical protein 4215340 2660178 BB3965 Bordetella bronchiseptica RB50 hypothetical protein NP_890499.1 4214330 D 257310 CDS NP_890500.1 33602940 2660179 4215473..4216246 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3105; molybdate ABC transporter substrate-binding protein 4216246 2660179 BB3966 Bordetella bronchiseptica RB50 molybdate ABC transporter substrate-binding protein NP_890500.1 4215473 D 257310 CDS NP_890501.1 33602941 2660057 4216276..4216932 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3104+BP3450; hypothetical protein 4216932 2660057 BB3967 Bordetella bronchiseptica RB50 hypothetical protein NP_890501.1 4216276 D 257310 CDS NP_890502.1 33602942 2659268 4217378..4217761 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3449; hypothetical protein 4217761 2659268 BB3968 Bordetella bronchiseptica RB50 hypothetical protein NP_890502.1 4217378 D 257310 CDS NP_890503.1 33602943 2659269 4217819..4218421 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3448; hypothetical protein 4218421 2659269 BB3969 Bordetella bronchiseptica RB50 hypothetical protein NP_890503.1 4217819 D 257310 CDS NP_890504.1 33602944 2659336 complement(4218439..4218840) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3447; hypothetical protein 4218840 2659336 BB3970 Bordetella bronchiseptica RB50 hypothetical protein NP_890504.1 4218439 R 257310 CDS NP_890505.1 33602945 2659337 4218974..4219867 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3446; LysR family transcriptional regulator 4219867 2659337 BB3971 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_890505.1 4218974 D 257310 CDS NP_890506.1 33602946 2659280 4219864..4220445 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3445; NUDIX hydrolase 4220445 2659280 BB3972 Bordetella bronchiseptica RB50 NUDIX hydrolase NP_890506.1 4219864 D 257310 CDS NP_890507.1 33602947 2659273 4220450..4221214 1 NC_002927.3 leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase 4221214 aat 2659273 aat Bordetella bronchiseptica RB50 leucyl/phenylalanyl-tRNA--protein transferase NP_890507.1 4220450 D 257310 CDS NP_890508.1 33602948 2659274 4221242..4221976 1 NC_002927.3 Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate; arginyl-tRNA-protein transferase 4221976 2659274 BB3974 Bordetella bronchiseptica RB50 arginyl-tRNA-protein transferase NP_890508.1 4221242 D 257310 CDS NP_890509.1 33602949 2662207 4222017..4223066 1 NC_002927.3 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 4223066 pyrD 2662207 pyrD Bordetella bronchiseptica RB50 dihydroorotate dehydrogenase 2 NP_890509.1 4222017 D 257310 CDS NP_890510.1 33602950 2661536 complement(4223214..4223792) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3441; hypothetical protein 4223792 2661536 BB3976 Bordetella bronchiseptica RB50 hypothetical protein NP_890510.1 4223214 R 257310 CDS NP_890511.1 33602951 2661537 4224179..4225156 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3440; hypothetical protein 4225156 2661537 BB3977 Bordetella bronchiseptica RB50 hypothetical protein NP_890511.1 4224179 D 257310 CDS NP_890512.1 33602952 2661538 complement(4225250..4229644) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3439; dermonecrotic toxin 4229644 dnt 2661538 dnt Bordetella bronchiseptica RB50 dermonecrotic toxin NP_890512.1 4225250 R 257310 CDS NP_890513.1 33602953 2661010 complement(4229845..4230693) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3438; IclR family transcriptional regulator 4230693 2661010 BB3979 Bordetella bronchiseptica RB50 IclR family transcriptional regulator NP_890513.1 4229845 R 257310 CDS NP_890514.1 33602954 2661048 complement(4230851..4231663) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3437; hypothetical protein 4231663 2661048 BB3980 Bordetella bronchiseptica RB50 hypothetical protein NP_890514.1 4230851 R 257310 CDS NP_890515.1 33602955 2661049 complement(4231716..4232516) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3393; inner membrane protein 4232516 2661049 BB3981 Bordetella bronchiseptica RB50 inner membrane protein NP_890515.1 4231716 R 257310 CDS NP_890516.1 33602956 2661050 4232578..4232961 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3394; hypothetical protein 4232961 2661050 BB3982 Bordetella bronchiseptica RB50 hypothetical protein NP_890516.1 4232578 D 257310 CDS NP_890517.1 33602957 2660763 complement(4232973..4234244) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3395; ATP-dependent RNA helicase 4234244 2660763 BB3983 Bordetella bronchiseptica RB50 ATP-dependent RNA helicase NP_890517.1 4232973 R 257310 CDS NP_890518.1 33602958 2660842 complement(4234699..4235028) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3396; inner membrane protein 4235028 2660842 BB3984 Bordetella bronchiseptica RB50 inner membrane protein NP_890518.1 4234699 R 257310 CDS NP_890519.1 33602959 2660843 complement(4235031..4235699) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3397; inner membrane protein 4235699 2660843 BB3985 Bordetella bronchiseptica RB50 inner membrane protein NP_890519.1 4235031 R 257310 CDS NP_890520.1 33602960 2660694 4235963..4236883 1 NC_002927.3 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 4236883 ilvE 2660694 ilvE Bordetella bronchiseptica RB50 branched-chain amino acid aminotransferase NP_890520.1 4235963 D 257310 CDS NP_890521.1 33602961 2660475 4236930..4237142 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3399; hypothetical protein 4237142 2660475 BB3987 Bordetella bronchiseptica RB50 hypothetical protein NP_890521.1 4236930 D 257310 CDS NP_890522.1 33602962 2660476 4237165..4237587 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3400; hypothetical protein 4237587 2660476 BB3988 Bordetella bronchiseptica RB50 hypothetical protein NP_890522.1 4237165 D 257310 CDS NP_890523.1 33602963 2660477 4237604..4238704 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3401; hypothetical protein 4238704 2660477 BB3989 Bordetella bronchiseptica RB50 hypothetical protein NP_890523.1 4237604 D 257310 CDS NP_890524.1 33602964 2660478 complement(4238801..4240318) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3402; hypothetical protein 4240318 2660478 BB3990 Bordetella bronchiseptica RB50 hypothetical protein NP_890524.1 4238801 R 257310 CDS NP_890525.1 33602965 2661561 4240394..4241233 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3403; UTP--glucose-1-phosphate uridylyltransferase 4241233 2661561 BB3991 Bordetella bronchiseptica RB50 UTP--glucose-1-phosphate uridylyltransferase NP_890525.1 4240394 D 257310 CDS NP_890526.1 33602966 2661562 complement(4241255..4242136) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3404; inner membrane protein 4242136 2661562 BB3992 Bordetella bronchiseptica RB50 inner membrane protein NP_890526.1 4241255 R 257310 CDS NP_890527.1 33602967 2661410 complement(4242218..4243312) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3405; outer membrane porin protein OmpQ 4243312 ompQ 2661410 ompQ Bordetella bronchiseptica RB50 outer membrane porin protein OmpQ NP_890527.1 4242218 R 257310 CDS NP_890528.1 33602968 2661411 complement(4243570..4243929) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3409; hypothetical protein 4243929 2661411 BB3994 Bordetella bronchiseptica RB50 hypothetical protein NP_890528.1 4243570 R 257310 CDS NP_890529.1 33602969 2661412 complement(4244311..4245318) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3410; Ca2+/Na+ antiporter 4245318 2661412 BB3995 Bordetella bronchiseptica RB50 Ca2+/Na+ antiporter NP_890529.1 4244311 R 257310 CDS NP_890530.1 33602970 2659912 4245635..4246975 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3411; Xaa-Pro aminopeptidase 4246975 2659912 BB3996 Bordetella bronchiseptica RB50 Xaa-Pro aminopeptidase NP_890530.1 4245635 D 257310 CDS NP_890531.1 33602971 2659963 complement(4246985..4247437) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3412; inner membrane protein 4247437 2659963 BB3997 Bordetella bronchiseptica RB50 inner membrane protein NP_890531.1 4246985 R 257310 CDS NP_890532.1 33602972 2659964 4247534..4248715 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3413; hypothetical protein 4248715 2659964 BB3998 Bordetella bronchiseptica RB50 hypothetical protein NP_890532.1 4247534 D 257310 CDS NP_890533.1 33602973 2659937 4248775..4249806 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3414; hypothetical protein 4249806 2659937 BB3999 Bordetella bronchiseptica RB50 hypothetical protein NP_890533.1 4248775 D 257310 CDS NP_890534.1 33602974 2661374 4249847..4250086 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3415; DNA-binding protein 4250086 fis 2661374 fis Bordetella bronchiseptica RB50 DNA-binding protein NP_890534.1 4249847 D 257310 CDS NP_890535.1 33602975 2661375 4250156..4251745 1 NC_002927.3 involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 4251745 purH 2661375 purH Bordetella bronchiseptica RB50 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase NP_890535.1 4250156 D 257310 CDS NP_890536.1 33602976 2661543 4251745..4252293 1 NC_002927.3 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 4252293 ruvC 2661543 ruvC Bordetella bronchiseptica RB50 Holliday junction resolvase NP_890536.1 4251745 D 257310 CDS NP_890537.1 33602977 2661502 4252374..4252946 1 NC_002927.3 plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 4252946 ruvA 2661502 ruvA Bordetella bronchiseptica RB50 Holliday junction DNA helicase RuvA NP_890537.1 4252374 D 257310 CDS NP_890538.1 33602978 2660483 complement(4252965..4253876) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3419; hypothetical protein 4253876 2660483 BB4004 Bordetella bronchiseptica RB50 hypothetical protein NP_890538.1 4252965 R 257310 CDS NP_890539.1 33602979 2660484 complement(4253950..4254918) 1 NC_002927.3 catalyzes the formation of 2-oxobutanoate from L-threonine or the formation of pyruvate from serine; serine/threonine dehydratase 4254918 2660484 BB4005 Bordetella bronchiseptica RB50 serine/threonine dehydratase NP_890539.1 4253950 R 257310 CDS NP_890540.1 33602980 2661607 4255041..4256114 1 NC_002927.3 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 4256114 ruvB 2661607 ruvB Bordetella bronchiseptica RB50 Holliday junction DNA helicase RuvB NP_890540.1 4255041 D 257310 CDS NP_890541.1 33602981 2660762 complement(4256119..4257939) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3422; ATP-dependent DNA helicase 4257939 2660762 BB4007 Bordetella bronchiseptica RB50 ATP-dependent DNA helicase NP_890541.1 4256119 R 257310 CDS NP_890542.1 33602982 2660936 complement(4258016..4259467) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3221; hypothetical protein 4259467 2660936 BB4008 Bordetella bronchiseptica RB50 hypothetical protein NP_890542.1 4258016 R 257310 CDS NP_890543.1 33602983 2660821 4259625..4260326 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3222; transcriptional regulatory protein OmpR 4260326 ompR 2660821 ompR Bordetella bronchiseptica RB50 transcriptional regulatory protein OmpR NP_890543.1 4259625 D 257310 CDS NP_890544.1 33602984 2661011 4260326..4261750 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3223; two-component sensor 4261750 2661011 BB4010 Bordetella bronchiseptica RB50 two-component sensor NP_890544.1 4260326 D 257310 CDS NP_890545.1 33602985 2661007 complement(4261767..4262822) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3224; cytochrome oxidase 4262822 2661007 BB4011 Bordetella bronchiseptica RB50 cytochrome oxidase NP_890545.1 4261767 R 257310 CDS NP_890546.1 33602986 2660086 complement(4262819..4264210) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3225; transmembrane cytochrome oxidase 4264210 2660086 BB4012 Bordetella bronchiseptica RB50 transmembrane cytochrome oxidase NP_890546.1 4262819 R 257310 CDS NP_890547.1 33602987 2662087 4264275..4266038 1 NC_002927.3 catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase 4266038 glnS 2662087 glnS Bordetella bronchiseptica RB50 glutaminyl-tRNA synthetase NP_890547.1 4264275 D 257310 CDS NP_890548.1 33602988 2659039 4266150..4267028 1 NC_002927.3 blocks the formation of polar Z-ring septums; septum formation inhibitor 4267028 minC 2659039 minC Bordetella bronchiseptica RB50 septum formation inhibitor NP_890548.1 4266150 D 257310 CDS NP_890549.1 33602989 2659040 4267141..4267956 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3228; septum site-determining protein 4267956 minD 2659040 minD Bordetella bronchiseptica RB50 septum site-determining protein NP_890549.1 4267141 D 257310 CDS NP_890550.1 33602990 2660034 4267960..4268211 1 NC_002927.3 works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; cell division topological specificity factor MinE 4268211 minE 2660034 minE Bordetella bronchiseptica RB50 cell division topological specificity factor MinE NP_890550.1 4267960 D 257310 CDS NP_890551.1 33602991 2659990 complement(4268382..4268603) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3231; osmotically inducible lipoprotein B precursor 4268603 osmB 2659990 osmB Bordetella bronchiseptica RB50 osmotically inducible lipoprotein B precursor NP_890551.1 4268382 R 257310 CDS NP_890552.1 33602992 2659322 complement(4268801..4269340) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3232; hypothetical protein 4269340 2659322 BB4018 Bordetella bronchiseptica RB50 hypothetical protein NP_890552.1 4268801 R 257310 CDS NP_890553.1 33602993 2658988 complement(4269361..4271034) 1 NC_002927.3 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; ABC transporter ATP-binding protein 4271034 2658988 BB4019 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_890553.1 4269361 R 257310 CDS NP_890554.1 33602994 2659818 complement(4271129..4272046) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3234; hypothetical protein 4272046 2659818 BB4020 Bordetella bronchiseptica RB50 hypothetical protein NP_890554.1 4271129 R 257310 CDS NP_890555.1 33602995 2660441 4272159..4272674 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3235; hypothetical protein 4272674 2660441 BB4021 Bordetella bronchiseptica RB50 hypothetical protein NP_890555.1 4272159 D 257310 CDS NP_890556.1 33602996 2660442 4272795..4274276 1 NC_002927.3 catalyzes the formation of indole-3-acetic acid from indole-3-acetamide; indole acetimide hydrolase 4274276 2660442 BB4022 Bordetella bronchiseptica RB50 indole acetimide hydrolase NP_890556.1 4272795 D 257310 CDS NP_890557.1 33602997 2660675 4274409..4274906 1 NC_002927.3 hypothetical protein 4274906 2660675 BB4023 Bordetella bronchiseptica RB50 hypothetical protein NP_890557.1 4274409 D 257310 CDS NP_890558.1 33602998 2660676 complement(4274919..4275911) 1 NC_002927.3 ABC transporter ATP-binding protein 4275911 2660676 BB4024 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_890558.1 4274919 R 257310 CDS NP_890559.1 33602999 2659898 complement(4275908..4276882) 1 NC_002927.3 ABC transporter ATP-binding protein 4276882 2659898 BB4025 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_890559.1 4275908 R 257310 CDS NP_890560.1 33603000 2660495 complement(4276890..4277804) 1 NC_002927.3 binding-protein-dependent permease 4277804 2660495 BB4026 Bordetella bronchiseptica RB50 binding-protein-dependent permease NP_890560.1 4276890 R 257310 CDS NP_890561.1 33603001 2660808 complement(4277804..4278790) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3236; binding-protein-dependent permease 4278790 2660808 BB4027 Bordetella bronchiseptica RB50 binding-protein-dependent permease NP_890561.1 4277804 R 257310 CDS NP_890562.1 33603002 2659485 complement(4278870..4280441) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3237; peptide ABC transporter substrate-binding protein 4280441 2659485 BB4028 Bordetella bronchiseptica RB50 peptide ABC transporter substrate-binding protein NP_890562.1 4278870 R 257310 CDS NP_890563.1 33603003 2659486 complement(4280560..4281495) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3238; glycosyl transferase family protein 4281495 2659486 BB4029 Bordetella bronchiseptica RB50 glycosyl transferase family protein NP_890563.1 4280560 R 257310 CDS NP_890564.1 33603004 2658962 4281684..4282628 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3239; LysR family transcriptional regulator 4282628 2658962 BB4030 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_890564.1 4281684 D 257310 CDS NP_890565.1 33603005 2660001 complement(4282697..4282912) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3239A; hypothetical protein 4282912 2660001 BB4031 Bordetella bronchiseptica RB50 hypothetical protein NP_890565.1 4282697 R 257310 CDS NP_890566.1 33603006 2659670 4283196..4288913 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3240; excinuclease ABC subunit A 4288913 uvrA2 2659670 uvrA2 Bordetella bronchiseptica RB50 excinuclease ABC subunit A NP_890566.1 4283196 D 257310 CDS NP_890567.1 33603007 2660547 4288919..4290046 1 NC_002927.3 catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine; aminodeoxychorismate synthase 4290046 2660547 BB4033 Bordetella bronchiseptica RB50 aminodeoxychorismate synthase NP_890567.1 4288919 D 257310 CDS NP_890568.1 33603008 2660413 4290102..4290728 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3242; hypothetical protein 4290728 2660413 BB4034 Bordetella bronchiseptica RB50 hypothetical protein NP_890568.1 4290102 D 257310 CDS NP_890569.1 33603009 2660414 complement(4290978..4291688) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3244; oxidoreductase 4291688 2660414 BB4035 Bordetella bronchiseptica RB50 oxidoreductase NP_890569.1 4290978 R 257310 CDS NP_890570.1 33603010 2660792 complement(4291685..4292689) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3245; hypothetical protein 4292689 2660792 BB4036 Bordetella bronchiseptica RB50 hypothetical protein NP_890570.1 4291685 R 257310 CDS NP_890571.1 33603011 2661447 4292821..4294416 1 NC_002927.3 activates fatty acids by binding to coenzyme A; acyl-CoA synthetase 4294416 2661447 BB4037 Bordetella bronchiseptica RB50 acyl-CoA synthetase NP_890571.1 4292821 D 257310 CDS NP_890572.1 33603012 2659541 4294419..4295156 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3247; transcriptional regulator 4295156 2659541 BB4038 Bordetella bronchiseptica RB50 transcriptional regulator NP_890572.1 4294419 D 257310 CDS NP_890573.1 33603013 2661368 complement(4295312..4296184) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3248; hypothetical protein 4296184 2661368 BB4039 Bordetella bronchiseptica RB50 hypothetical protein NP_890573.1 4295312 R 257310 CDS NP_890574.1 33603014 2661369 4296453..4297673 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3249; inner membrane efflux protein 4297673 2661369 BB4040 Bordetella bronchiseptica RB50 inner membrane efflux protein NP_890574.1 4296453 D 257310 CDS NP_890575.1 33603015 2659928 4297670..4298329 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3250; hypothetical protein 4298329 2659928 BB4041 Bordetella bronchiseptica RB50 hypothetical protein NP_890575.1 4297670 D 257310 CDS NP_890576.1 33603016 2661545 4298401..4299033 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3251; pyridoxamine 5'-phosphate oxidase 4299033 pdxH 2661545 pdxH Bordetella bronchiseptica RB50 pyridoxamine 5'-phosphate oxidase NP_890576.1 4298401 D 257310 CDS NP_890577.1 33603017 2660976 4299063..4299581 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3252; monooxygenase 4299581 2660976 BB4043 Bordetella bronchiseptica RB50 monooxygenase NP_890577.1 4299063 D 257310 CDS NP_890578.1 33603018 2660977 4299592..4300701 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3253; hypothetical protein 4300701 2660977 BB4044 Bordetella bronchiseptica RB50 hypothetical protein NP_890578.1 4299592 D 257310 CDS NP_890579.1 33603019 2660426 4300748..4301602 1 NC_002927.3 produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase 4301602 purU 2660426 purU Bordetella bronchiseptica RB50 formyltetrahydrofolate deformylase NP_890579.1 4300748 D 257310 CDS NP_890580.1 33603020 2660857 complement(4301604..4302506) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3255; LysR family transcriptional regulator 4302506 2660857 BB4046 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_890580.1 4301604 R 257310 CDS NP_890581.1 33603021 2661429 4302616..4304325 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3256+BP0255; oxidoreductase 4304325 2661429 BB4047 Bordetella bronchiseptica RB50 oxidoreductase NP_890581.1 4302616 D 257310 CDS NP_890582.1 33603022 2659563 4304361..4305341 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0254; hypothetical protein 4305341 2659563 BB4048 Bordetella bronchiseptica RB50 hypothetical protein NP_890582.1 4304361 D 257310 CDS NP_890583.1 33603023 2659679 4305355..4306479 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0253; hypothetical protein 4306479 2659679 BB4049 Bordetella bronchiseptica RB50 hypothetical protein NP_890583.1 4305355 D 257310 CDS NP_890584.1 33603024 2659620 complement(4306487..4308241) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0252; gamma-glutamyltranspeptidase 4308241 ggt 2659620 ggt Bordetella bronchiseptica RB50 gamma-glutamyltranspeptidase NP_890584.1 4306487 R 257310 CDS NP_890585.1 33603025 2659621 4308348..4309247 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0251; LysR family transcriptional regulator 4309247 2659621 BB4051 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_890585.1 4308348 D 257310 CDS NP_890586.1 33603026 2660018 complement(4309312..4310295) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0250; hypothetical protein 4310295 2660018 BB4052 Bordetella bronchiseptica RB50 hypothetical protein NP_890586.1 4309312 R 257310 CDS NP_890587.1 33603027 2660075 4310431..4311411 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0249; hypothetical protein 4311411 2660075 BB4053 Bordetella bronchiseptica RB50 hypothetical protein NP_890587.1 4310431 D 257310 CDS NP_890588.1 33603028 2660076 complement(4311428..4312819) 1 NC_002927.3 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 4312819 fumC 2660076 fumC Bordetella bronchiseptica RB50 fumarate hydratase NP_890588.1 4311428 R 257310 CDS NP_890589.1 33603029 2661284 4312971..4313507 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0247; hypothetical protein 4313507 2661284 BB4055 Bordetella bronchiseptica RB50 hypothetical protein NP_890589.1 4312971 D 257310 CDS NP_890590.1 33603030 2659017 4313579..4314823 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0246; N-acetylmuramoyl-L-alanine amidase 4314823 amiC 2659017 amiC Bordetella bronchiseptica RB50 N-acetylmuramoyl-L-alanine amidase NP_890590.1 4313579 D 257310 CDS NP_890591.1 33603031 2659111 complement(4314966..4315604) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0245; hypothetical protein 4315604 dedA 2659111 dedA Bordetella bronchiseptica RB50 hypothetical protein NP_890591.1 4314966 R 257310 CDS NP_890592.1 33603032 2661524 4315691..4317580 1 NC_002927.3 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein 4317580 mutL 2661524 mutL Bordetella bronchiseptica RB50 DNA mismatch repair protein NP_890592.1 4315691 D 257310 CDS NP_890593.1 33603033 2660800 4317577..4318518 1 NC_002927.3 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 4318518 miaA 2660800 miaA Bordetella bronchiseptica RB50 tRNA delta(2)-isopentenylpyrophosphate transferase NP_890593.1 4317577 D 257310 CDS NP_890594.1 33603034 2659440 complement(4318562..4319611) 1 NC_002927.3 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 4319611 purM 2659440 purM Bordetella bronchiseptica RB50 phosphoribosylaminoimidazole synthetase NP_890594.1 4318562 R 257310 CDS NP_890595.1 33603035 2661425 4319864..4320565 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0241; DnaA regulatory inactivator Hda 4320565 2661425 BB4061 Bordetella bronchiseptica RB50 DnaA regulatory inactivator Hda NP_890595.1 4319864 D 257310 CDS NP_890596.1 33603036 2660566 4320562..4321260 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0240; hypothetical protein 4321260 2660566 BB4062 Bordetella bronchiseptica RB50 hypothetical protein NP_890596.1 4320562 D 257310 CDS NP_890597.1 33603037 2660567 4321261..4322616 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0239; poly(A) polymerase 4322616 pcnB 2660567 pcnB Bordetella bronchiseptica RB50 poly(A) polymerase NP_890597.1 4321261 D 257310 CDS NP_890598.1 33603038 2659835 4322613..4323104 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0238; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 4323104 folK 2659835 folK Bordetella bronchiseptica RB50 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase NP_890598.1 4322613 D 257310 CDS NP_890599.1 33603039 2661578 complement(4323123..4324079) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0237; hypothetical protein 4324079 2661578 BB4065 Bordetella bronchiseptica RB50 hypothetical protein NP_890599.1 4323123 R 257310 CDS NP_890600.1 33603040 2660372 complement(4324106..4325500) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0236; hypothetical protein 4325500 2660372 BB4066 Bordetella bronchiseptica RB50 hypothetical protein NP_890600.1 4324106 R 257310 CDS NP_890601.1 33603041 2660373 complement(4325497..4327599) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0235; hypothetical protein 4327599 2660373 BB4067 Bordetella bronchiseptica RB50 hypothetical protein NP_890601.1 4325497 R 257310 CDS NP_890602.1 33603042 2661404 4327770..4328813 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0234; C4-dicarboxylate ABC transporter substrate-binding protein 4328813 2661404 BB4068 Bordetella bronchiseptica RB50 C4-dicarboxylate ABC transporter substrate-binding protein NP_890602.1 4327770 D 257310 CDS NP_890603.1 33603043 2660658 4328857..4329600 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0233; GntR family transcriptional regulator 4329600 2660658 BB4069 Bordetella bronchiseptica RB50 GntR family transcriptional regulator NP_890603.1 4328857 D 257310 CDS NP_890604.1 33603044 2662236 complement(4329617..4330567) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0232; oxidoreductase 4330567 2662236 BB4070 Bordetella bronchiseptica RB50 oxidoreductase NP_890604.1 4329617 R 257310 CDS NP_890605.1 33603045 2662237 complement(4330622..4331032) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0231; 4-carboxymuconolactone decarboxylase 4331032 pcaC 2662237 pcaC Bordetella bronchiseptica RB50 4-carboxymuconolactone decarboxylase NP_890605.1 4330622 R 257310 CDS NP_890606.1 33603046 2660064 4331160..4331987 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0230; hypothetical protein 4331987 2660064 BB4072 Bordetella bronchiseptica RB50 hypothetical protein NP_890606.1 4331160 D 257310 CDS NP_890607.1 33603047 2659366 4331984..4332781 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0229; beta-D-hydroxybutyrate dehydrogenase 4332781 2659366 BB4073 Bordetella bronchiseptica RB50 beta-D-hydroxybutyrate dehydrogenase NP_890607.1 4331984 D 257310 CDS NP_890608.1 33603048 2659114 4332834..4333748 1 NC_002927.3 2-hydroxy-3-oxopropionate reductase 4333748 2659114 BB4074 Bordetella bronchiseptica RB50 2-hydroxy-3-oxopropionate reductase NP_890608.1 4332834 D 257310 CDS NP_890609.1 33603049 2660066 4333745..4334545 1 NC_002927.3 oxidoreductase 4334545 2660066 BB4075 Bordetella bronchiseptica RB50 oxidoreductase NP_890609.1 4333745 D 257310 CDS NP_890610.1 33603050 2659062 4334580..4335566 1 NC_002927.3 hypothetical protein 4335566 2659062 BB4076 Bordetella bronchiseptica RB50 hypothetical protein NP_890610.1 4334580 D 257310 CDS NP_890611.1 33603051 2662110 complement(4335600..4336514) 1 NC_002927.3 sugar kinase 4336514 2662110 BB4077 Bordetella bronchiseptica RB50 sugar kinase NP_890611.1 4335600 R 257310 CDS NP_890612.1 33603052 2662111 complement(4336518..4337357) 1 NC_002927.3 citrate lyase subunit beta 4337357 2662111 BB4078 Bordetella bronchiseptica RB50 citrate lyase subunit beta NP_890612.1 4336518 R 257310 CDS NP_890613.1 33603053 2661039 complement(4337354..4338550) 1 NC_002927.3 CAIB/BAIF family protein 4338550 2661039 BB4079 Bordetella bronchiseptica RB50 CAIB/BAIF family protein NP_890613.1 4337354 R 257310 CDS NP_890614.1 33603054 2661090 complement(4338547..4339377) 1 NC_002927.3 hypothetical protein 4339377 2661090 BB4080 Bordetella bronchiseptica RB50 hypothetical protein NP_890614.1 4338547 R 257310 CDS NP_890615.1 33603055 2661091 complement(4339620..4341143) 1 NC_002927.3 fumarate hydratase 4341143 2661091 BB4081 Bordetella bronchiseptica RB50 fumarate hydratase NP_890615.1 4339620 R 257310 CDS NP_890616.1 33603056 2661092 complement(4341212..4341979) 1 NC_002927.3 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 4341979 2661092 BB4082 Bordetella bronchiseptica RB50 enoyl-CoA hydratase NP_890616.1 4341212 R 257310 CDS NP_890617.1 33603057 2660846 4342162..4343127 1 NC_002927.3 hypothetical protein 4343127 2660846 BB4083 Bordetella bronchiseptica RB50 hypothetical protein NP_890617.1 4342162 D 257310 CDS NP_890618.1 33603058 2660606 4343149..4343928 1 NC_002927.3 GntR family transcriptional regulator 4343928 2660606 BB4084 Bordetella bronchiseptica RB50 GntR family transcriptional regulator NP_890618.1 4343149 D 257310 CDS NP_890619.1 33603059 2660607 4343951..4345213 1 NC_002927.3 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; 3-isopropylmalate dehydratase large subunit 4345213 2660607 BB4085 Bordetella bronchiseptica RB50 3-isopropylmalate dehydratase large subunit NP_890619.1 4343951 D 257310 CDS NP_890620.1 33603060 2661409 4345210..4345725 1 NC_002927.3 3-isopropylmalate dehydratase small subunit 4345725 2661409 BB4086 Bordetella bronchiseptica RB50 3-isopropylmalate dehydratase small subunit NP_890620.1 4345210 D 257310 CDS NP_890621.1 33603061 2661601 4345725..4346588 1 NC_002927.3 isocitrate lyase family protein 4346588 2661601 BB4087 Bordetella bronchiseptica RB50 isocitrate lyase family protein NP_890621.1 4345725 D 257310 CDS NP_890622.1 33603062 2661602 complement(4346585..4347775) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0032; transporter 4347775 2661602 BB4088 Bordetella bronchiseptica RB50 transporter NP_890622.1 4346585 R 257310 CDS NP_890623.1 33603063 2661313 4348002..4348976 1 NC_002927.3 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 4348976 glyQ 2661313 glyQ Bordetella bronchiseptica RB50 glycyl-tRNA synthetase subunit alpha NP_890623.1 4348002 D 257310 CDS NP_890624.1 33603064 2661585 4348978..4351116 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0034; glycyl-tRNA synthetase subunit beta 4351116 glyS 2661585 glyS Bordetella bronchiseptica RB50 glycyl-tRNA synthetase subunit beta NP_890624.1 4348978 D 257310 CDS NP_890625.1 33603065 2661080 4351113..4351652 1 NC_002927.3 Converts the D-glycero-beta-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate; D,D-heptose 1,7-bisphosphate phosphatase 4351652 2661080 BB4091 Bordetella bronchiseptica RB50 D,D-heptose 1,7-bisphosphate phosphatase NP_890625.1 4351113 D 257310 CDS NP_890626.1 33603066 2660559 4351656..4352384 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0036; acyltransferase 4352384 2660559 BB4092 Bordetella bronchiseptica RB50 acyltransferase NP_890626.1 4351656 D 257310 CDS NP_890627.1 33603067 2660560 4352371..4353279 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0037; hypothetical protein 4353279 2660560 BB4093 Bordetella bronchiseptica RB50 hypothetical protein NP_890627.1 4352371 D 257310 CDS NP_890628.1 33603068 2661371 4353350..4353745 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0038; lactoylglutathione lyase 4353745 gloA 2661371 gloA Bordetella bronchiseptica RB50 lactoylglutathione lyase NP_890628.1 4353350 D 257310 CDS NP_890629.1 33603069 2660732 4353755..4354285 1 NC_002927.3 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 4354285 def 2660732 def Bordetella bronchiseptica RB50 peptide deformylase NP_890629.1 4353755 D 257310 CDS NP_890630.2 161609261 2660859 complement(4354414..4356627) 1 NC_002927.3 functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; acyl-CoA dehydrogenase 4356627 2660859 BB4096 Bordetella bronchiseptica RB50 acyl-CoA dehydrogenase NP_890630.2 4354414 R 257310 CDS NP_890631.1 33603071 2660973 4356911..4357999 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3334; hypothetical protein 4357999 2660973 BB4097 Bordetella bronchiseptica RB50 hypothetical protein NP_890631.1 4356911 D 257310 CDS NP_890632.1 33603072 2659299 complement(4358002..4359444) 1 NC_002927.3 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 4359444 pykA 2659299 pykA Bordetella bronchiseptica RB50 pyruvate kinase NP_890632.1 4358002 R 257310 CDS NP_890633.1 33603073 2659707 4359549..4360694 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3332; glycerate kinase 4360694 garK 2659707 garK Bordetella bronchiseptica RB50 glycerate kinase NP_890633.1 4359549 D 257310 CDS NP_890634.1 33603074 2662224 complement(4360726..4361523) 1 NC_002927.3 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 4361523 ksgA 2662224 ksgA Bordetella bronchiseptica RB50 dimethyladenosine transferase NP_890634.1 4360726 R 257310 CDS NP_890635.1 33603075 2662225 complement(4361548..4363107) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3330; peptidyl-prolyl cis-trans isomerase 4363107 2662225 BB4101 Bordetella bronchiseptica RB50 peptidyl-prolyl cis-trans isomerase NP_890635.1 4361548 R 257310 CDS NP_890636.1 33603076 2661939 complement(4363104..4365476) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3329; outer membrane (permeability) protein 4365476 2661939 BB4102 Bordetella bronchiseptica RB50 outer membrane (permeability) protein NP_890636.1 4363104 R 257310 CDS NP_890637.1 33603077 2662089 4365586..4366689 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3328; hypothetical protein 4366689 2662089 BB4103 Bordetella bronchiseptica RB50 hypothetical protein NP_890637.1 4365586 D 257310 CDS NP_890638.1 33603078 2662090 4366689..4367381 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3327; nucleotidyl transferase 4367381 2662090 BB4104 Bordetella bronchiseptica RB50 nucleotidyl transferase NP_890638.1 4366689 D 257310 CDS NP_890639.1 33603079 2662091 4367525..4368226 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3326; inner membrane protein 4368226 2662091 BB4105 Bordetella bronchiseptica RB50 inner membrane protein NP_890639.1 4367525 D 257310 CDS NP_890640.1 33603080 2661176 complement(4368211..4368588) 1 NC_002927.3 4-alpha-hydroxytetrahydrobiopterin dehydratase activity; catalyzes the formation of (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7, 8-dihydro-6H-pterin from (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7, 8-tetrahydro-4a-hydroxypterin; functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction; pterin-4-alpha-carbinolamine dehydratase 4368588 phhB 2661176 phhB Bordetella bronchiseptica RB50 pterin-4-alpha-carbinolamine dehydratase NP_890640.1 4368211 R 257310 CDS NP_890641.1 33603081 2661177 complement(4368612..4369259) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3324; outer membrane protein 4369259 2661177 BB4107 Bordetella bronchiseptica RB50 outer membrane protein NP_890641.1 4368612 R 257310 CDS NP_890642.1 33603082 2660779 complement(4369373..4370245) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0718; carboxyvinyl-carboxyphosphonate phosphorylmutase 4370245 2660779 BB4108 Bordetella bronchiseptica RB50 carboxyvinyl-carboxyphosphonate phosphorylmutase NP_890642.1 4369373 R 257310 CDS NP_890643.1 33603083 2662601 4370586..4370804 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0720; hypothetical protein 4370804 2662601 BB4109 Bordetella bronchiseptica RB50 hypothetical protein NP_890643.1 4370586 D 257310 CDS NP_890644.1 33603084 2662602 complement(4370844..4372223) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0721; aminotransferase 4372223 2662602 BB4110 Bordetella bronchiseptica RB50 aminotransferase NP_890644.1 4370844 R 257310 CDS NP_890645.1 33603085 2659819 complement(4372264..4373661) 1 NC_002927.3 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase 4373661 2659819 BB4111 Bordetella bronchiseptica RB50 amidase NP_890645.1 4372264 R 257310 CDS NP_890646.1 33603086 2661357 complement(4373701..4375353) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0723; ABC transporter ATP-binding protein 4375353 2661357 BB4112 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_890646.1 4373701 R 257310 CDS NP_890647.1 33603087 2660538 complement(4375357..4376241) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0724; ABC transporter permease 4376241 2660538 BB4113 Bordetella bronchiseptica RB50 ABC transporter permease NP_890647.1 4375357 R 257310 CDS NP_890648.1 33603088 2660399 complement(4376241..4377182) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0725; ABC transporter permease 4377182 2660399 BB4114 Bordetella bronchiseptica RB50 ABC transporter permease NP_890648.1 4376241 R 257310 CDS NP_890649.1 33603089 2661293 complement(4377261..4378880) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0726; ABC transporter substrate-binding protein 4378880 2661293 BB4115 Bordetella bronchiseptica RB50 ABC transporter substrate-binding protein NP_890649.1 4377261 R 257310 CDS NP_890650.1 33603090 2659548 4379047..4379862 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0727; transcriptional regulator 4379862 2659548 BB4116 Bordetella bronchiseptica RB50 transcriptional regulator NP_890650.1 4379047 D 257310 CDS NP_890651.1 33603091 2659451 complement(4379930..4380499) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0728; transcriptional regulator 4380499 2659451 BB4117 Bordetella bronchiseptica RB50 transcriptional regulator NP_890651.1 4379930 R 257310 CDS NP_890652.1 33603092 2659452 4381056..4382153 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0731; carboxynorspermidine decarboxylase 4382153 nspC 2659452 nspC Bordetella bronchiseptica RB50 carboxynorspermidine decarboxylase NP_890652.1 4381056 D 257310 CDS NP_890653.1 33603093 2661325 4382187..4383452 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0732; hypothetical protein 4383452 2661325 BB4119 Bordetella bronchiseptica RB50 hypothetical protein NP_890653.1 4382187 D 257310 CDS NP_890654.1 33603094 2661326 complement(4383508..4383996) 1 NC_002927.3 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; in Pseudomonas aeruginosa this extracytoplasmic function sigma factor may be involved in the transcription of the ferric pyoverdine receptor gene, fpvA.; RNA polymerase sigma factor 4383996 2661326 BB4120 Bordetella bronchiseptica RB50 RNA polymerase sigma factor NP_890654.1 4383508 R 257310 CDS NP_890655.1 33603095 2659583 4384128..4385099 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0737; inner membrane sensor for iron transport 4385099 2659583 BB4121 Bordetella bronchiseptica RB50 inner membrane sensor for iron transport NP_890655.1 4384128 D 257310 CDS NP_890656.1 33603096 2659509 4385219..4387663 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0736; ferric siderophore receptor 4387663 bfrF 2659509 bfrF Bordetella bronchiseptica RB50 ferric siderophore receptor NP_890656.1 4385219 D 257310 CDS NP_890657.1 33603097 2660710 complement(4387679..4388269) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0735; hypothetical protein 4388269 2660710 BB4123 Bordetella bronchiseptica RB50 hypothetical protein NP_890657.1 4387679 R 257310 CDS NP_890658.1 33603098 2660711 complement(4388359..4389321) 1 NC_002927.3 enzyme-regulator fusion protein 4389321 2660711 BB4124 Bordetella bronchiseptica RB50 enzyme-regulator fusion protein NP_890658.1 4388359 R 257310 CDS NP_890659.1 33603099 2661127 4389556..4390872 1 NC_002927.3 ring-hydroxylating dioxygenase large subunit 4390872 2661127 BB4125 Bordetella bronchiseptica RB50 ring-hydroxylating dioxygenase large subunit NP_890659.1 4389556 D 257310 CDS NP_890660.1 33603100 2660400 4390878..4391399 1 NC_002927.3 ring-hydroxylating dioxygenase small subunit 4391399 2660400 BB4126 Bordetella bronchiseptica RB50 ring-hydroxylating dioxygenase small subunit NP_890660.1 4390878 D 257310 CDS NP_890661.1 33603101 2659984 complement(4391528..4392502) 1 NC_002927.3 LysR family transcriptional regulator 4392502 2659984 BB4127 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_890661.1 4391528 R 257310 CDS NP_890662.1 33603102 2659989 4392768..4393787 1 NC_002927.3 hypothetical protein 4393787 2659989 BB4128 Bordetella bronchiseptica RB50 hypothetical protein NP_890662.1 4392768 D 257310 CDS NP_890663.1 33603103 2659365 4393809..4394624 1 NC_002927.3 hydrolase 4394624 2659365 BB4129 Bordetella bronchiseptica RB50 hydrolase NP_890663.1 4393809 D 257310 CDS NP_890664.1 33603104 2659181 4394669..4395085 1 NC_002927.3 hypothetical protein 4395085 2659181 BB4130 Bordetella bronchiseptica RB50 hypothetical protein NP_890664.1 4394669 D 257310 CDS NP_890665.1 33603105 2659182 4395098..4396132 1 NC_002927.3 similar to the 3-(2,3-dihydroxyphenyl)propionate dioxygenase from E. coli; dioxygenase 4396132 2659182 BB4131 Bordetella bronchiseptica RB50 dioxygenase NP_890665.1 4395098 D 257310 CDS NP_890666.1 33603106 2659153 4396129..4397010 1 NC_002927.3 hypothetical protein 4397010 2659153 BB4132 Bordetella bronchiseptica RB50 hypothetical protein NP_890666.1 4396129 D 257310 CDS NP_890667.1 33603107 2661155 4397304..4397597 1 NC_002927.3 hypothetical protein 4397597 2661155 BB4133 Bordetella bronchiseptica RB50 hypothetical protein NP_890667.1 4397304 D 257310 CDS NP_890668.1 33603108 2661156 4397627..4398598 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2847; secreted protein 4398598 2661156 BB4134 Bordetella bronchiseptica RB50 secreted protein NP_890668.1 4397627 D 257310 CDS NP_890669.1 33603109 2661157 4398607..4399782 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2846; hypothetical protein 4399782 2661157 BB4135 Bordetella bronchiseptica RB50 hypothetical protein NP_890669.1 4398607 D 257310 CDS NP_890670.1 33603110 2660284 4399779..4401422 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2843; hypothetical protein 4401422 2660284 BB4136 Bordetella bronchiseptica RB50 hypothetical protein NP_890670.1 4399779 D 257310 CDS NP_890671.1 33603111 2661722 complement(4401461..4401682) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2842; Weakly similar to Lactococcus lactis hypothetical 9.2 kDa protein SWALL:Q9JRK4 (EMBL:AF178424) (77 aa) fasta scores: E(): 4, 27.11% id in 59 aa; hypothetical protein 4401682 2661722 BB4137 Bordetella bronchiseptica RB50 hypothetical protein NP_890671.1 4401461 R 257310 CDS NP_890672.1 33603112 2661723 4402025..4403299 1 NC_002927.3 Similar to Xylella fastidiosa phage-related integrase xf0631 SWALL:Q9PFM6 (EMBL:AE003908) (413 aa) fasta scores: E(): 2e-54, 42.41% id in 422 aa, and to Xanthomonas axonopodis phage-related integrase int or xac2222 SWALL:AAM37075 (EMBL:AE011860) (399 aa) fasta scores: E(): 5.2e-07, 27.27% id in 396 aa; phage-related integrase 4403299 2661723 BB4138 Bordetella bronchiseptica RB50 phage-related integrase NP_890672.1 4402025 D 257310 CDS NP_890673.1 33603113 2662175 4403556..4403798 1 NC_002927.3 Similar to Salmonella enterica subsp. enterica serovar Typhimurium excisionase xiS SWALL:Q9FDI1 (EMBL:AF261825) (122 aa) fasta scores: E(): 0.56, 36.14% id in 83 aa, and to Rhizobium loti hypothetical protein Msr9739 msr9739 SWALL:Q98NU3 (EMBL:AP003017) (93 aa) fasta scores: E(): 0.00042, 43.54% id in 62 aa; hypothetical protein 4403798 2662175 BB4139 Bordetella bronchiseptica RB50 hypothetical protein NP_890673.1 4403556 D 257310 CDS NP_890674.1 33603114 2662176 4403880..4405982 1 NC_002927.3 Weakly similar to Bacteriophage APSE-1 complete genome SWALL:Q9T1U5 (EMBL:AF157835) (752 aa) fasta scores: E(): 0.0002, 30.76% id in 221 aa, and to Synechococcus RepA protein repA SWALL:Q53576 (EMBL:S89470) (876 aa) fasta scores: E(): 0.007, 25.64% id in 273 aa; hypothetical protein 4405982 2662176 BB4140 Bordetella bronchiseptica RB50 hypothetical protein NP_890674.1 4403880 D 257310 CDS NP_890675.1 33603115 2662177 4406010..4406357 1 NC_002927.3 no significant database matches; hypothetical protein 4406357 2662177 BB4141 Bordetella bronchiseptica RB50 hypothetical protein NP_890675.1 4406010 D 257310 CDS NP_890676.1 33603116 2661333 complement(4406322..4406711) 1 NC_002927.3 no significant database matches; hypothetical protein 4406711 2661333 BB4142 Bordetella bronchiseptica RB50 hypothetical protein NP_890676.1 4406322 R 257310 CDS NP_890677.1 33603117 2661334 4406933..4407643 1 NC_002927.3 Similar to Xylella fastidiosa hypothetical protein Xf0635 xf0635 SWALL:Q9PFM2 (EMBL:AE003908) (240 aa) fasta scores: E(): 9.4e-44, 53.41% id in 234 aa; hypothetical protein 4407643 2661334 BB4143 Bordetella bronchiseptica RB50 hypothetical protein NP_890677.1 4406933 D 257310 CDS NP_890678.1 33603118 2662610 4407664..4408173 1 NC_002927.3 Similar to Xylella fastidiosa hypothetical protein Xf0636 xf0636 SWALL:Q9PFM1 (EMBL:AE003908) (155 aa) fasta scores: E(): 2e-16, 40.64% id in 155 aa; hypothetical protein 4408173 2662610 BB4144 Bordetella bronchiseptica RB50 hypothetical protein NP_890678.1 4407664 D 257310 CDS NP_890679.1 33603119 2662611 4408170..4408550 1 NC_002927.3 no significant database matches; hypothetical protein 4408550 2662611 BB4145 Bordetella bronchiseptica RB50 hypothetical protein NP_890679.1 4408170 D 257310 CDS NP_890680.1 33603120 2662612 4408564..4408803 1 NC_002927.3 no significant database matches; hypothetical protein 4408803 2662612 BB4146 Bordetella bronchiseptica RB50 hypothetical protein NP_890680.1 4408564 D 257310 CDS NP_890681.1 33603121 2662613 4408808..4409005 1 NC_002927.3 no significant database matches; hypothetical protein 4409005 2662613 BB4147 Bordetella bronchiseptica RB50 hypothetical protein NP_890681.1 4408808 D 257310 CDS NP_890682.1 33603122 2659576 complement(4409209..4409517) 1 NC_002927.3 no significant database matches; hypothetical protein 4409517 2659576 BB4148 Bordetella bronchiseptica RB50 hypothetical protein NP_890682.1 4409209 R 257310 CDS NP_890683.1 33603123 2659577 complement(4409571..4410059) 1 NC_002927.3 no significant database matches; hypothetical protein 4410059 2659577 BB4149 Bordetella bronchiseptica RB50 hypothetical protein NP_890683.1 4409571 R 257310 CDS NP_890684.1 33603124 2660501 4410146..4410352 1 NC_002927.3 no significant database matches; hypothetical protein 4410352 2660501 BB4149A Bordetella bronchiseptica RB50 hypothetical protein NP_890684.1 4410146 D 257310 CDS NP_890685.1 33603125 2660502 complement(4410503..4411243) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2841; short-chain dehydrogenase 4411243 2660502 BB4150 Bordetella bronchiseptica RB50 short-chain dehydrogenase NP_890685.1 4410503 R 257310 CDS NP_890686.1 33603126 2661058 4411347..4411967 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2840; TetR family transcriptional regulator 4411967 2661058 BB4151 Bordetella bronchiseptica RB50 TetR family transcriptional regulator NP_890686.1 4411347 D 257310 CDS NP_890687.1 33603127 2661141 complement(4411969..4414077) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2839; hypothetical protein 4414077 2661141 BB4152 Bordetella bronchiseptica RB50 hypothetical protein NP_890687.1 4411969 R 257310 CDS NP_890688.1 33603128 2661142 complement(4414218..4414877) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2838; hydrolase 4414877 2661142 BB4153 Bordetella bronchiseptica RB50 hydrolase NP_890688.1 4414218 R 257310 CDS NP_890689.1 33603129 2661143 complement(4414909..4415373) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2837; MerR family transcriptional regulator 4415373 2661143 BB4154 Bordetella bronchiseptica RB50 MerR family transcriptional regulator NP_890689.1 4414909 R 257310 CDS NP_890690.1 33603130 2659540 complement(4415886..4416638) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2836; DNA-binding protein 4416638 2659540 BB4155 Bordetella bronchiseptica RB50 DNA-binding protein NP_890690.1 4415886 R 257310 CDS NP_890691.1 33603131 2661439 complement(4416645..4417907) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2835; ABC transporter substrate-binding protein 4417907 2661439 BB4156 Bordetella bronchiseptica RB50 ABC transporter substrate-binding protein NP_890691.1 4416645 R 257310 CDS NP_890692.1 33603132 2659555 complement(4417949..4419211) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2833; hypothetical protein 4419211 2659555 BB4157 Bordetella bronchiseptica RB50 hypothetical protein NP_890692.1 4417949 R 257310 CDS NP_890693.1 33603133 2659556 complement(4419216..4420343) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2832; ABC transporter ATP-binding protein 4420343 2659556 BB4158 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_890693.1 4419216 R 257310 CDS NP_890694.1 33603134 2659515 complement(4420354..4421181) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2831; ABC transporter 4421181 2659515 BB4159 Bordetella bronchiseptica RB50 ABC transporter NP_890694.1 4420354 R 257310 CDS NP_890695.1 33603135 2660714 complement(4421168..4422034) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2830; ABC transporter 4422034 2660714 BB4160 Bordetella bronchiseptica RB50 ABC transporter NP_890695.1 4421168 R 257310 CDS NP_890696.1 33603136 2661464 complement(4422031..4423404) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2828; hypothetical protein 4423404 2661464 BB4161 Bordetella bronchiseptica RB50 hypothetical protein NP_890696.1 4422031 R 257310 CDS NP_890697.1 33603137 2659683 complement(4423401..4423805) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2827; hypothetical protein 4423805 2659683 BB4162 Bordetella bronchiseptica RB50 hypothetical protein NP_890697.1 4423401 R 257310 CDS NP_890698.1 33603138 2659684 4424249..4425160 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2826; hypothetical protein 4425160 2659684 BB4163 Bordetella bronchiseptica RB50 hypothetical protein NP_890698.1 4424249 D 257310 CDS NP_890699.1 33603139 2659685 4425175..4425885 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2825; GntR family transcriptional regulator 4425885 2659685 BB4164 Bordetella bronchiseptica RB50 GntR family transcriptional regulator NP_890699.1 4425175 D 257310 CDS NP_890700.1 33603140 2662012 4425882..4427126 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2824; hypothetical protein 4427126 2662012 BB4165 Bordetella bronchiseptica RB50 hypothetical protein NP_890700.1 4425882 D 257310 CDS NP_890701.1 33603141 2659065 4427128..4427562 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2823; hypothetical protein 4427562 2659065 BB4166 Bordetella bronchiseptica RB50 hypothetical protein NP_890701.1 4427128 D 257310 CDS NP_890702.1 33603142 2659066 4427591..4427896 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2822; hypothetical protein 4427896 2659066 BB4167 Bordetella bronchiseptica RB50 hypothetical protein NP_890702.1 4427591 D 257310 CDS NP_890703.1 33603143 2662014 complement(4427954..4429102) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2820; alcohol dehydrogenase 4429102 2662014 BB4168 Bordetella bronchiseptica RB50 alcohol dehydrogenase NP_890703.1 4427954 R 257310 CDS NP_890704.1 33603144 2661931 complement(4429601..4430398) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2818; hypothetical protein 4430398 2661931 BB4169 Bordetella bronchiseptica RB50 hypothetical protein NP_890704.1 4429601 R 257310 CDS NP_890705.1 33603145 2661421 complement(4430446..4431045) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2817; ABC transporter 4431045 2661421 BB4170 Bordetella bronchiseptica RB50 ABC transporter NP_890705.1 4430446 R 257310 CDS NP_890706.1 33603146 2659429 complement(4431056..4432144) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2816; ABC transporter ATP-binding protein 4432144 2659429 BB4171 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_890706.1 4431056 R 257310 CDS NP_890707.1 33603147 2659503 complement(4432309..4434534) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2815; hypothetical protein 4434534 2659503 BB4172 Bordetella bronchiseptica RB50 hypothetical protein NP_890707.1 4432309 R 257310 CDS NP_890708.1 33603148 2660544 complement(4434829..4436727) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2814; hypothetical protein 4436727 2660544 BB4173 Bordetella bronchiseptica RB50 hypothetical protein NP_890708.1 4434829 R 257310 CDS NP_890709.1 33603149 2660545 4436858..4437751 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2813; inositol monophosphatase-family protein 4437751 2660545 BB4174 Bordetella bronchiseptica RB50 inositol monophosphatase-family protein NP_890709.1 4436858 D 257310 CDS NP_890710.1 33603150 2661130 complement(4437770..4439446) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2811; long-chain-fatty-acid--CoA ligase 4439446 fadD2 2661130 fadD2 Bordetella bronchiseptica RB50 long-chain-fatty-acid--CoA ligase NP_890710.1 4437770 R 257310 CDS NP_890711.1 33603151 2660761 4439523..4440719 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2810; hydrolase 4440719 2660761 BB4176 Bordetella bronchiseptica RB50 hydrolase NP_890711.1 4439523 D 257310 CDS NP_890712.1 33603152 2661144 complement(4440733..4441611) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2809; transcriptional regulator 4441611 2661144 BB4177 Bordetella bronchiseptica RB50 transcriptional regulator NP_890712.1 4440733 R 257310 CDS NP_890713.1 33603153 2660783 4441796..4442764 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2808; integral membrane protein 4442764 2660783 BB4178 Bordetella bronchiseptica RB50 integral membrane protein NP_890713.1 4441796 D 257310 CDS NP_890714.1 33603154 2659469 4442828..4443238 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2807; thioesterase 4443238 2659469 BB4179 Bordetella bronchiseptica RB50 thioesterase NP_890714.1 4442828 D 257310 CDS NP_890715.1 33603155 2659524 4443249..4444721 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2806; cation transport protein 4444721 2659524 BB4180 Bordetella bronchiseptica RB50 cation transport protein NP_890715.1 4443249 D 257310 CDS NP_890716.1 33603156 2661317 4444827..4445375 1 NC_002927.3 catalyzes the transfer of palmitate to lipid A; palmitoyl transferase 4445375 pagP 2661317 pagP Bordetella bronchiseptica RB50 palmitoyl transferase NP_890716.1 4444827 D 257310 CDS NP_890717.1 33603157 2661318 complement(4445372..4445980) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3007; hypothetical protein 4445980 2661318 BB4182 Bordetella bronchiseptica RB50 hypothetical protein NP_890717.1 4445372 R 257310 CDS NP_890718.1 33603158 2659664 complement(4446163..4446633) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3008; glutamate uptake regulatory protein 4446633 grp 2659664 grp Bordetella bronchiseptica RB50 glutamate uptake regulatory protein NP_890718.1 4446163 R 257310 CDS NP_890719.1 33603159 2659187 complement(4446640..4447899) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3009; D-amino acid dehydrogenase small subunit 4447899 2659187 BB4184 Bordetella bronchiseptica RB50 D-amino acid dehydrogenase small subunit NP_890719.1 4446640 R 257310 CDS NP_890720.1 33603160 2659188 complement(4447984..4448763) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3010; oxidoreductase 4448763 2659188 BB4185 Bordetella bronchiseptica RB50 oxidoreductase NP_890720.1 4447984 R 257310 CDS NP_890721.1 33603161 2659992 4448878..4449432 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3011; hypothetical protein 4449432 2659992 BB4186 Bordetella bronchiseptica RB50 hypothetical protein NP_890721.1 4448878 D 257310 CDS NP_890722.1 33603162 2659993 complement(4449442..4450425) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3012; hypothetical protein 4450425 2659993 BB4187 Bordetella bronchiseptica RB50 hypothetical protein NP_890722.1 4449442 R 257310 CDS NP_890723.1 33603163 2659002 complement(4450605..4451324) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3013; hypothetical protein 4451324 2659002 BB4188 Bordetella bronchiseptica RB50 hypothetical protein NP_890723.1 4450605 R 257310 CDS NP_890724.1 33603164 2659003 complement(4451341..4454076) 1 NC_002927.3 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 4454076 secA 2659003 secA Bordetella bronchiseptica RB50 preprotein translocase subunit SecA NP_890724.1 4451341 R 257310 CDS NP_890725.1 33603165 2663922 complement(4454256..4455242) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3015; M23/M37 family peptidase 4455242 2663922 BB4190 Bordetella bronchiseptica RB50 M23/M37 family peptidase NP_890725.1 4454256 R 257310 CDS NP_890726.1 33603166 2660083 4455284..4455778 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3016; hypothetical protein 4455778 2660083 BB4191 Bordetella bronchiseptica RB50 hypothetical protein NP_890726.1 4455284 D 257310 CDS NP_890727.1 33603167 2661983 complement(4455890..4456813) 1 NC_002927.3 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 4456813 lpxC 2661983 lpxC Bordetella bronchiseptica RB50 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase NP_890727.1 4455890 R 257310 CDS NP_890728.1 33603168 2661984 complement(4457042..4458226) 1 NC_002927.3 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 4458226 ftsZ 2661984 ftsZ Bordetella bronchiseptica RB50 cell division protein FtsZ NP_890728.1 4457042 R 257310 CDS NP_890729.1 33603169 2659712 complement(4458415..4459641) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3019; cell division protein FtsA 4459641 ftsA 2659712 ftsA Bordetella bronchiseptica RB50 cell division protein FtsA NP_890729.1 4458415 R 257310 CDS NP_890730.1 33603170 2659774 complement(4459646..4460467) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3020; cell division protein 4460467 ftsQ 2659774 ftsQ Bordetella bronchiseptica RB50 cell division protein NP_890730.1 4459646 R 257310 CDS NP_890731.1 33603171 2659775 complement(4460480..4461430) 1 NC_002927.3 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase 4461430 ddl 2659775 ddl Bordetella bronchiseptica RB50 D-alanine--D-alanine ligase NP_890731.1 4460480 R 257310 CDS NP_890732.1 33603172 2659249 complement(4461427..4462833) 1 NC_002927.3 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 4462833 murC 2659249 murC Bordetella bronchiseptica RB50 UDP-N-acetylmuramate--L-alanine ligase NP_890732.1 4461427 R 257310 CDS NP_890733.1 33603173 2659391 complement(4462830..4463903) 1 NC_002927.3 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 4463903 murG 2659391 murG Bordetella bronchiseptica RB50 undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase NP_890733.1 4462830 R 257310 CDS NP_890734.1 33603174 2662214 complement(4463900..4465093) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3024; cell division protein FtsW 4465093 ftsW 2662214 ftsW Bordetella bronchiseptica RB50 cell division protein FtsW NP_890734.1 4463900 R 257310 CDS NP_890735.1 33603175 2661413 complement(4465090..4466622) 1 NC_002927.3 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 4466622 murD 2661413 murD Bordetella bronchiseptica RB50 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase NP_890735.1 4465090 R 257310 CDS NP_890736.1 33603176 2660682 complement(4466619..4467752) 1 NC_002927.3 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 4467752 mraY 2660682 mraY Bordetella bronchiseptica RB50 phospho-N-acetylmuramoyl-pentapeptide- transferase NP_890736.1 4466619 R 257310 CDS NP_890737.1 33603177 2662206 complement(4467778..4470615) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3027; bifunctional UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase/UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase 4470615 murE 2662206 murE Bordetella bronchiseptica RB50 bifunctional UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase/UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase NP_890737.1 4467778 R 257310 CDS NP_890738.1 33603178 2662128 complement(4470612..4472312) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3028; peptidoglycan synthetase precursor 4472312 ftsI 2662128 ftsI Bordetella bronchiseptica RB50 peptidoglycan synthetase precursor NP_890738.1 4470612 R 257310 CDS NP_890739.1 33603179 2660617 complement(4472339..4472617) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3029; cell division protein 4472617 ftsL 2660617 ftsL Bordetella bronchiseptica RB50 cell division protein NP_890739.1 4472339 R 257310 CDS NP_890740.1 33603180 2660618 complement(4472617..4473711) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3030; Similar to Escherichia coli S-adenosyl-methyltransferase MraW or b0082 or z0092 or ecs0086 SWALL:MRAW_ECOLI (SWALL:P18595) (313 aa) fasta scores: E(): 8.9e-52, 52.94% id in 289 aa, and to Neisseria meningitidis s-adenosyl-methyltransferase MraW or nma2074 SWALL:MRAW_NEIMA (SWALL:Q9JSY9) (328 aa) fasta scores: E(): 1.2e-58, 58.74% id in 303 aa; S-adenosyl-methyltransferase MraW 4473711 mraW 2660618 mraW Bordetella bronchiseptica RB50 S-adenosyl-methyltransferase MraW NP_890740.1 4472617 R 257310 CDS NP_890741.1 33603181 2661089 complement(4473720..4474211) 1 NC_002927.3 MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ 4474211 mraZ 2661089 mraZ Bordetella bronchiseptica RB50 cell division protein MraZ NP_890741.1 4473720 R 257310 CDS NP_890742.1 33603182 2661595 4474951..4476759 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3034; ABC transporter ATP-binding protein 4476759 2661595 BB4207 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_890742.1 4474951 D 257310 CDS NP_890743.1 33603183 2659587 complement(4476799..4477878) 1 NC_002927.3 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 4477878 pyrC 2659587 pyrC Bordetella bronchiseptica RB50 dihydroorotase NP_890743.1 4476799 R 257310 CDS NP_890744.1 33603184 2659842 complement(4477875..4479068) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3036; hydrolase 4479068 2659842 BB4209 Bordetella bronchiseptica RB50 hydrolase NP_890744.1 4477875 R 257310 CDS NP_890745.1 33603185 2660391 4479218..4479496 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3037; hypothetical protein 4479496 2660391 BB4210 Bordetella bronchiseptica RB50 hypothetical protein NP_890745.1 4479218 D 257310 CDS NP_890746.1 33603186 2660392 complement(4479865..4480257) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3038; hypothetical protein 4480257 2660392 BB4211 Bordetella bronchiseptica RB50 hypothetical protein NP_890746.1 4479865 R 257310 CDS NP_890747.1 33603187 2660460 complement(4487378..4487854) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3039; leucine-responsive regulatory protein 4487854 lrp 2660460 lrp Bordetella bronchiseptica RB50 leucine-responsive regulatory protein NP_890747.1 4487378 R 257310 CDS NP_890748.1 33603188 2659784 4488007..4489119 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3040; hemolysin 4489119 bllY 2659784 bllY Bordetella bronchiseptica RB50 hemolysin NP_890748.1 4488007 D 257310 CDS NP_890749.1 33603189 2662158 complement(4489187..4489747) 1 NC_002927.3 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A 4489747 2662158 BB4214 Bordetella bronchiseptica RB50 methionine sulfoxide reductase A NP_890749.1 4489187 R 257310 CDS NP_890750.1 33603190 2662159 complement(4489771..4490097) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3042; cytochrome C552 precursor 4490097 cyt 2662159 cyt Bordetella bronchiseptica RB50 cytochrome C552 precursor NP_890750.1 4489771 R 257310 CDS NP_890751.1 33603191 2662002 complement(4490087..4491772) 1 NC_002927.3 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 4491772 ilvD 2662002 ilvD Bordetella bronchiseptica RB50 dihydroxy-acid dehydratase NP_890751.1 4490087 R 257310 CDS NP_890752.1 33603192 2661989 4491892..4492680 1 NC_002927.3 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 4492680 lgt 2661989 lgt Bordetella bronchiseptica RB50 prolipoprotein diacylglyceryl transferase NP_890752.1 4491892 D 257310 CDS NP_890753.1 33603193 2659092 complement(4492655..4493425) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3045; hypothetical protein 4493425 2659092 BB4218 Bordetella bronchiseptica RB50 hypothetical protein NP_890753.1 4492655 R 257310 CDS NP_890754.1 33603194 2659093 complement(4493739..4494050) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3047; hypothetical protein 4494050 2659093 BB4219 Bordetella bronchiseptica RB50 hypothetical protein NP_890754.1 4493739 R 257310 CDS NP_890755.1 33603195 2659724 complement(4494050..4494580) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3048; hypothetical protein 4494580 2659724 BB4220 Bordetella bronchiseptica RB50 hypothetical protein NP_890755.1 4494050 R 257310 CDS NP_890756.1 33603196 2659725 4494933..4495397 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3050; hypothetical protein 4495397 2659725 BB4221 Bordetella bronchiseptica RB50 hypothetical protein NP_890756.1 4494933 D 257310 CDS NP_890757.1 33603197 2660014 4495412..4496917 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3051; hypothetical protein 4496917 2660014 BB4222 Bordetella bronchiseptica RB50 hypothetical protein NP_890757.1 4495412 D 257310 CDS NP_890758.1 33603198 2659650 4497114..4498721 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3052; gamma-glutamyltranspeptidase 4498721 2659650 BB4223 Bordetella bronchiseptica RB50 gamma-glutamyltranspeptidase NP_890758.1 4497114 D 257310 CDS NP_890759.1 33603199 2659651 4498777..4499682 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3053; oxidoreductase 4499682 2659651 BB4224 Bordetella bronchiseptica RB50 oxidoreductase NP_890759.1 4498777 D 257310 CDS NP_890760.1 33603200 2661303 complement(4499731..4500360) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0497+BP3054; ACP phosphodiesterase 4500360 acpD 2661303 acpD Bordetella bronchiseptica RB50 ACP phosphodiesterase NP_890760.1 4499731 R 257310 CDS NP_890761.1 33603201 2658995 4500482..4501405 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0498; LysR family transcriptional regulator 4501405 2658995 BB4226 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_890761.1 4500482 D 257310 CDS NP_890762.1 33603202 2660196 complement(4501414..4501812) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0499; hypothetical protein 4501812 2660196 BB4227 Bordetella bronchiseptica RB50 hypothetical protein NP_890762.1 4501414 R 257310 CDS NP_890763.1 33603203 2660197 4502054..4504030 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0500; hypothetical protein 4504030 2660197 BB4228 Bordetella bronchiseptica RB50 hypothetical protein NP_890763.1 4502054 D 257310 CDS NP_890764.1 33603204 2660198 complement(4504056..4505567) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3351+BP0501; two component sensor kinase 4505567 2660198 BB4229 Bordetella bronchiseptica RB50 two component sensor kinase NP_890764.1 4504056 R 257310 CDS NP_890765.1 33603205 2660974 complement(4505599..4506252) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3350; two component response regulator 4506252 2660974 BB4230 Bordetella bronchiseptica RB50 two component response regulator NP_890765.1 4505599 R 257310 CDS NP_890766.1 33603206 2660975 complement(4506266..4506838) 1 NC_002927.3 hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase 4506838 nudH 2660975 nudH Bordetella bronchiseptica RB50 dinucleoside polyphosphate hydrolase NP_890766.1 4506266 R 257310 CDS NP_890767.1 33603207 2660728 4506904..4508634 1 NC_002927.3 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 4508634 proS 2660728 proS Bordetella bronchiseptica RB50 prolyl-tRNA synthetase NP_890767.1 4506904 D 257310 CDS NP_890768.1 33603208 2661122 4508687..4509115 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3347; hypothetical protein 4509115 2661122 BB4233 Bordetella bronchiseptica RB50 hypothetical protein NP_890768.1 4508687 D 257310 CDS NP_890769.1 33603209 2659938 4509118..4509798 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3346; TolQ-like translocation protein 4509798 2659938 BB4234 Bordetella bronchiseptica RB50 TolQ-like translocation protein NP_890769.1 4509118 D 257310 CDS NP_890770.1 33603210 2661168 4509798..4510256 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3345; TolR-like translocation protein 4510256 2661168 BB4235 Bordetella bronchiseptica RB50 TolR-like translocation protein NP_890770.1 4509798 D 257310 CDS NP_890771.1 33603211 2661169 4510293..4511432 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3344; proline-rich inner membrane protein 4511432 2661169 BB4236 Bordetella bronchiseptica RB50 proline-rich inner membrane protein NP_890771.1 4510293 D 257310 CDS NP_890772.1 33603212 2661172 4511440..4512765 1 NC_002927.3 forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB 4512765 tolB 2661172 tolB Bordetella bronchiseptica RB50 translocation protein TolB NP_890772.1 4511440 D 257310 CDS NP_890773.1 33603213 2661173 4512797..4513294 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3342; peptidoglycan-associated lipoprotein 4513294 2661173 BB4238 Bordetella bronchiseptica RB50 peptidoglycan-associated lipoprotein NP_890773.1 4512797 D 257310 CDS NP_890774.1 33603214 2662606 4513381..4514070 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3341; hypothetical protein 4514070 2662606 BB4239 Bordetella bronchiseptica RB50 hypothetical protein NP_890774.1 4513381 D 257310 CDS NP_890775.1 33603215 2659948 4514070..4515119 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3340; heme ABC transporter permease 4515119 2659948 BB4240 Bordetella bronchiseptica RB50 heme ABC transporter permease NP_890775.1 4514070 D 257310 CDS NP_890776.1 33603216 2659525 4515116..4515910 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3339; ABC transporter ATP-binding protein 4515910 2659525 BB4241 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_890776.1 4515116 D 257310 CDS NP_890777.1 33603217 2661002 4516079..4517065 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3338; hypothetical protein 4517065 2661002 BB4242 Bordetella bronchiseptica RB50 hypothetical protein NP_890777.1 4516079 D 257310 CDS NP_890778.1 33603218 2661003 4517070..4518671 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3337; gamma-glutamyltranspeptidase 4518671 2661003 BB4243 Bordetella bronchiseptica RB50 gamma-glutamyltranspeptidase NP_890778.1 4517070 D 257310 CDS NP_890779.1 33603219 2660966 complement(4518682..4519137) 1 NC_002927.3 MarR family transcriptional regulator 4519137 2660966 BB4244 Bordetella bronchiseptica RB50 MarR family transcriptional regulator NP_890779.1 4518682 R 257310 CDS NP_890780.1 33603220 2660961 4519228..4520496 1 NC_002927.3 amino acid oxidoreductase 4520496 2660961 BB4245 Bordetella bronchiseptica RB50 amino acid oxidoreductase NP_890780.1 4519228 D 257310 CDS NP_890781.1 33603221 2660962 complement(4520509..4521009) 1 NC_002927.3 hypothetical protein 4521009 2660962 BB4246 Bordetella bronchiseptica RB50 hypothetical protein NP_890781.1 4520509 R 257310 CDS NP_890782.1 33603222 2660971 4521129..4521935 1 NC_002927.3 hydrolase 4521935 2660971 BB4247 Bordetella bronchiseptica RB50 hydrolase NP_890782.1 4521129 D 257310 CDS NP_890783.1 33603223 2660972 4522158..4523156 1 NC_002927.3 hypothetical protein 4523156 2660972 BB4248 Bordetella bronchiseptica RB50 hypothetical protein NP_890783.1 4522158 D 257310 CDS NP_890784.1 33603224 2661024 4523257..4524891 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0423; fatty acid CoA ligase 4524891 2661024 BB4249 Bordetella bronchiseptica RB50 fatty acid CoA ligase NP_890784.1 4523257 D 257310 CDS NP_890785.1 33603225 2660764 complement(4524940..4526133) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0422; thiolase 4526133 2660764 BB4250 Bordetella bronchiseptica RB50 thiolase NP_890785.1 4524940 R 257310 CDS NP_890786.1 33603226 2660498 complement(4526199..4527227) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0421; acyl-CoA dehydrogenase 4527227 2660498 BB4251 Bordetella bronchiseptica RB50 acyl-CoA dehydrogenase NP_890786.1 4526199 R 257310 CDS NP_890787.1 33603227 2660499 complement(4527254..4528426) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0420; acyl-CoA dehydrogenase 4528426 2660499 BB4252 Bordetella bronchiseptica RB50 acyl-CoA dehydrogenase NP_890787.1 4527254 R 257310 CDS NP_890788.1 33603228 2659600 4528552..4529529 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0419; LysR family transcriptional regulator 4529529 2659600 BB4253 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_890788.1 4528552 D 257310 CDS NP_890789.1 33603229 2659501 complement(4529540..4530511) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0418; hypothetical protein 4530511 2659501 BB4254 Bordetella bronchiseptica RB50 hypothetical protein NP_890789.1 4529540 R 257310 CDS NP_890790.1 33603230 2659502 complement(4530578..4531363) 1 NC_002927.3 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 4531363 2659502 BB4255 Bordetella bronchiseptica RB50 enoyl-CoA hydratase NP_890790.1 4530578 R 257310 CDS NP_890791.1 33603231 2659919 complement(4531356..4532588) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0416; hypothetical protein 4532588 2659919 BB4256 Bordetella bronchiseptica RB50 hypothetical protein NP_890791.1 4531356 R 257310 CDS NP_890792.1 33603232 2659841 complement(4532784..4533539) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0415; hypothetical protein 4533539 2659841 BB4257 Bordetella bronchiseptica RB50 hypothetical protein NP_890792.1 4532784 R 257310 CDS NP_890793.1 33603233 2659831 4533650..4534168 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0414; Mg(2+) transporter 4534168 2659831 BB4258 Bordetella bronchiseptica RB50 Mg(2+) transporter NP_890793.1 4533650 D 257310 CDS NP_890794.1 33603234 2660856 complement(4534165..4536288) 1 NC_002927.3 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 4536288 fusA 2660856 fusA Bordetella bronchiseptica RB50 elongation factor G NP_890794.1 4534165 R 257310 CDS NP_890795.1 33603235 2660733 complement(4536699..4537169) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0410; universal stress protein 4537169 2660733 BB4260 Bordetella bronchiseptica RB50 universal stress protein NP_890795.1 4536699 R 257310 CDS NP_890796.1 33603236 2659511 complement(4537258..4537602) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0411; hypothetical protein 4537602 2659511 BB4261 Bordetella bronchiseptica RB50 hypothetical protein NP_890796.1 4537258 R 257310 CDS NP_890797.1 33603237 2659512 complement(4537702..4539102) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0412; GntR family transcriptional regulator 4539102 2659512 BB4262 Bordetella bronchiseptica RB50 GntR family transcriptional regulator NP_890797.1 4537702 R 257310 CDS NP_890798.1 33603238 2659884 4539291..4540205 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0393; hypothetical protein 4540205 2659884 BB4263 Bordetella bronchiseptica RB50 hypothetical protein NP_890798.1 4539291 D 257310 CDS NP_890799.1 33603239 2659834 4540202..4540861 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0394; hypothetical protein 4540861 2659834 BB4264 Bordetella bronchiseptica RB50 hypothetical protein NP_890799.1 4540202 D 257310 CDS NP_890800.1 33603240 2659081 4540949..4541872 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0395; hypothetical protein 4541872 2659081 BB4265 Bordetella bronchiseptica RB50 hypothetical protein NP_890800.1 4540949 D 257310 CDS NP_890801.1 33603241 2659082 complement(4541878..4542333) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0396; hypothetical protein 4542333 2659082 BB4266 Bordetella bronchiseptica RB50 hypothetical protein NP_890801.1 4541878 R 257310 CDS NP_890802.1 33603242 2659386 complement(4542330..4543433) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0397; hypothetical protein 4543433 2659386 BB4267 Bordetella bronchiseptica RB50 hypothetical protein NP_890802.1 4542330 R 257310 CDS NP_890803.1 33603243 2659387 complement(4543621..4545240) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0398; hypothetical protein 4545240 2659387 BB4268 Bordetella bronchiseptica RB50 hypothetical protein NP_890803.1 4543621 R 257310 CDS NP_890804.1 33603244 2661145 complement(4545237..4546295) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0399; glycosyl transferase 4546295 2661145 BB4269 Bordetella bronchiseptica RB50 glycosyl transferase NP_890804.1 4545237 R 257310 CDS NP_890805.1 33603245 2662123 4546425..4546940 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0400; acetyltransferase 4546940 2662123 BB4270 Bordetella bronchiseptica RB50 acetyltransferase NP_890805.1 4546425 D 257310 CDS NP_890806.1 33603246 2662124 4547136..4548341 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0402; sodium/glutamate symport carrier protein 4548341 gltS 2662124 gltS Bordetella bronchiseptica RB50 sodium/glutamate symport carrier protein NP_890806.1 4547136 D 257310 CDS NP_890807.1 33603247 2662007 4548338..4549849 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0403; hypothetical protein 4549849 2662007 BB4272 Bordetella bronchiseptica RB50 hypothetical protein NP_890807.1 4548338 D 257310 CDS NP_890808.1 33603248 2661974 complement(4549865..4551178) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0404; short-chain fatty acids transporter 4551178 atoE 2661974 atoE Bordetella bronchiseptica RB50 short-chain fatty acids transporter NP_890808.1 4549865 R 257310 CDS NP_890809.1 33603249 2661965 complement(4551369..4551548) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0405; hypothetical protein 4551548 2661965 BB4274 Bordetella bronchiseptica RB50 hypothetical protein NP_890809.1 4551369 R 257310 CDS NP_890810.1 33603250 2661029 complement(4551958..4552692) 1 NC_002927.3 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 4552692 dnaQ 2661029 dnaQ Bordetella bronchiseptica RB50 DNA polymerase III subunit epsilon NP_890810.1 4551958 R 257310 CDS NP_890811.1 33603251 2659568 complement(4552701..4555787) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0407; hypothetical protein 4555787 2659568 BB4276 Bordetella bronchiseptica RB50 hypothetical protein NP_890811.1 4552701 R 257310 CDS NP_890812.1 33603252 2660872 complement(4555800..4556879) 1 NC_002927.3 hemolysin D 4556879 2660872 BB4277 Bordetella bronchiseptica RB50 hemolysin D NP_890812.1 4555800 R 257310 CDS NP_890813.1 33603253 2661551 complement(4557048..4557515) 1 NC_002927.3 An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease H 4557515 rnhA 2661551 rnhA Bordetella bronchiseptica RB50 ribonuclease H NP_890813.1 4557048 R 257310 CDS NP_890814.1 33603254 2661552 complement(4557576..4558346) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3212; hypothetical protein 4558346 2661552 BB4279 Bordetella bronchiseptica RB50 hypothetical protein NP_890814.1 4557576 R 257310 CDS NP_890815.1 33603255 2659410 4558367..4559167 1 NC_002927.3 Similar to Escherichia coli, and Escherichia coli O157:H7 probable hydroxyacylglutathione hydrolase glob or b0212 or z0236 or ecs0208 SWALL:GLO2_ECOLI (SWALL:Q47677) (251 aa) fasta scores: E(): 1.1e-36, 47.45% id in 255 aa; ortholog of Bordetella pertussis (BX470248) BP3213; hydroxyacylglutathione hydrolase 4559167 gloB 2659410 gloB Bordetella bronchiseptica RB50 hydroxyacylglutathione hydrolase NP_890815.1 4558367 D 257310 CDS NP_890816.1 33603256 2659411 4559178..4560587 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3214; membrane-bound lytic murein transglycosylase D precursor 4560587 2659411 BB4281 Bordetella bronchiseptica RB50 membrane-bound lytic murein transglycosylase D precursor NP_890816.1 4559178 D 257310 CDS NP_890817.1 33603257 2661304 4560682..4561467 1 NC_002927.3 Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-ACP reductase 4561467 fabI 2661304 fabI Bordetella bronchiseptica RB50 enoyl-ACP reductase NP_890817.1 4560682 D 257310 CDS NP_890818.1 33603258 2660238 complement(4561619..4562011) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3217; hypothetical protein 4562011 2660238 BB4283 Bordetella bronchiseptica RB50 hypothetical protein NP_890818.1 4561619 R 257310 CDS NP_890819.1 33603259 2660239 4562149..4562829 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3218; hypothetical protein 4562829 2660239 BB4284 Bordetella bronchiseptica RB50 hypothetical protein NP_890819.1 4562149 D 257310 CDS NP_890820.1 33603260 2661134 complement(4562834..4563805) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3219; hypothetical protein 4563805 2661134 BB4285 Bordetella bronchiseptica RB50 hypothetical protein NP_890820.1 4562834 R 257310 CDS NP_890821.1 33603261 2661656 complement(4563901..4564806) 1 NC_002927.3 catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide; nicotinate-nucleotide pyrophosphorylase 4564806 nadC 2661656 nadC Bordetella bronchiseptica RB50 nicotinate-nucleotide pyrophosphorylase NP_890821.1 4563901 R 257310 CDS NP_890822.1 33603262 2661657 complement(4564909..4565877) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3724; hypothetical protein 4565877 2661657 BB4287 Bordetella bronchiseptica RB50 hypothetical protein NP_890822.1 4564909 R 257310 CDS NP_890823.1 33603263 2659800 4566220..4566453 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3723; no significant database matches; hypothetical protein 4566453 2659800 BB4288 Bordetella bronchiseptica RB50 hypothetical protein NP_890823.1 4566220 D 257310 CDS NP_890824.1 33603264 2659801 4566694..4568055 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3722; Similar to Pseudomonas pseudoalcaligenes phenoxybenzoate dioxygenase alpha subunit pobA SWALL:POBA_PSEPS (SWALL:Q52185) (409 aa) fasta scores: E(): 4.5e-32, 37.15% id in 401 aa, and to Pseudomonas putida phthalate 4,5-dioxygenase oxygenase subunit pht3 SWALL:PHT3_PSEPU (SWALL:Q05183) (439 aa) fasta scores: E(): 9.7e-25, 31.32% id in 399 aa; iron-sulfur protein 4568055 pobA 2659801 pobA Bordetella bronchiseptica RB50 iron-sulfur protein NP_890824.1 4566694 D 257310 CDS NP_890825.1 33603265 2659438 4568114..4568752 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3721; no significant database matches; hypothetical protein 4568752 2659438 BB4291 Bordetella bronchiseptica RB50 hypothetical protein NP_890825.1 4568114 D 257310 CDS NP_890826.1 33603266 2659439 4568752..4569621 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3720; Similar to Streptomyces coelicolor branched amino acid transport system permease sco7183 or sc8a11.11 SWALL:Q9FBZ9 (EMBL:AL391041) (290 aa) fasta scores: E(): 1.1e-34, 40.78% id in 282 aa, and to Burkholderia cepacia channel-forming polypeptide SWALL:Q8VUC1 (EMBL:AF169302) (294 aa) fasta scores: E(): 3.8e-28, 33.21% id in 283 aa; branched-chain amino acid transport system permease 4569621 2659439 BB4292 Bordetella bronchiseptica RB50 branched-chain amino acid transport system permease NP_890826.1 4568752 D 257310 CDS NP_890827.1 33603267 2660127 4569618..4570580 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3719; Similar to Streptomyces coelicolor branched amino acid transport system permease sco7184 or sc8a11.12 SWALL:Q9FBZ8 (EMBL:AL391041) (349 aa) fasta scores: E(): 8.9e-26, 32.09% id in 324 aa, and to Burkholderia cepacia channel-forming polypeptide SWALL:Q8VUC2 (EMBL:AF169302) (314 aa) fasta scores: E(): 1.7e-24, 34.06% id in 317 aa; branched-chain amino acid transport system permease 4570580 2660127 BB4293 Bordetella bronchiseptica RB50 branched-chain amino acid transport system permease NP_890827.1 4569618 D 257310 CDS NP_890828.1 33603268 2662508 4570577..4572175 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3718; Similar to Agrobacterium tumefaciens ABC transporter nucleotide binding/ATPase rbsa or atu6069 or agr_pti_138 SWALL:Q8U666 (EMBL:AE009425) (528 aa) fasta scores: E(): 5.8e-23, 29.98% id in 527 aa, and to Rhizobium meliloti ABC transporter ATP-binding protein r02257 or smc01645 SWALL:Q92NE8 (EMBL:AL591790) (543 aa) fasta scores: E(): 2.6e-20, 27.82% id in 539 aa; branched-chain amino acid transport ATP-binding protein 4572175 2662508 BB4294 Bordetella bronchiseptica RB50 branched-chain amino acid transport ATP-binding protein NP_890828.1 4570577 D 257310 CDS NP_890829.1 33603269 2662140 4572172..4573395 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3717; Similar to Escherichia coli hypothetical protein ylbe ylbe or b0519 SWALL:YLBE_ECOLI (SWALL:P77129) (419 aa) fasta scores: E(): 3.2e-27, 32.27% id in 409 aa, and to Salmonella typhi hypothetical protein Sty0578 sty0578 SWALL:Q8Z8Q2 (EMBL:AL627267) (415 aa) fasta scores: E(): 8.9e-27, 31.29% id in 409 aa; hypothetical protein 4573395 2662140 BB4295 Bordetella bronchiseptica RB50 hypothetical protein NP_890829.1 4572172 D 257310 CDS NP_890830.1 33603270 2659913 4573392..4574537 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3716; Similar to Streptomyces coelicolor branched amino acid binding secreted protein sco7185 or sc8a11.13 SWALL:Q9FBZ7 (EMBL:AL391041) (396 aa) fasta scores: E(): 1.8e-24, 29.91% id in 361 aa, and to Ralstonia solanacearum probable amino-acid-binding periplasmic rsc3329 or rs02563 SWALL:Q8XU64 (EMBL:AL646074) (382 aa) fasta scores: E(): 1.2e-22, 28.16% id in 387 aa; amino acid ABC transporter substrate-binding protein 4574537 2659913 BB4296 Bordetella bronchiseptica RB50 amino acid ABC transporter substrate-binding protein NP_890830.1 4573392 D 257310 CDS NP_890831.1 33603271 2659914 complement(4574553..4575467) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3715; Similar to Pseudomonas aeruginosa probable transcriptional regulator pa0218 SWALL:Q9I6S0 (EMBL:AE004459) (306 aa) fasta scores: E(): 2e-29, 34.42% id in 305 aa, and to Rhizobium loti transcriptional regulator mll7443 SWALL:Q986A7 (EMBL:AP003011) (303 aa) fasta scores: E(): 2.9e-20, 29.96% id in 287 aa; LysR family transcriptional regulator 4575467 2659914 BB4297 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_890831.1 4574553 R 257310 CDS NP_890832.1 33603272 2661636 4575590..4576381 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3714; Similar to Thermus thermophilus probable quinone oxidoreductase SWALL:BAB92082 (EMBL:AB085185) (302 aa) fasta scores: E(): 4e-07, 30.7% id in 228 aa, and to Myxococcus xanthus oxidoreductase SWALL:Q8VQC9 (EMBL:AF457462) (325 aa) fasta scores: E(): 9.4e-06, 27.08% id in 240 aa; zinc-binding dehydrogenase 4576381 2661636 BB4298 Bordetella bronchiseptica RB50 zinc-binding dehydrogenase NP_890832.1 4575590 D 257310 CDS NP_890833.1 33603273 2660292 4576378..4577682 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3713; Similar to Bradyrhizobium japonicum malonamidase e2 SWALL:Q9ZIV5 (EMBL:AF012735) (414 aa) fasta scores: E(): 2.2e-40, 39.15% id in 401 aa, and to Rhizobium meliloti amidase ra0756 or sma1377 SWALL:Q92YV7 (EMBL:AE007262) (471 aa) fasta scores: E(): 7e-29, 34.43% id in 395 aa; amidase 4577682 2660292 BB4299 Bordetella bronchiseptica RB50 amidase NP_890833.1 4576378 D 257310 CDS NP_890834.1 33603274 2660293 4577679..4578623 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3712; Similar to Pseudomonas sp. CA10 reductase SWALL:Q9AQN2 (EMBL:AB047548) (315 aa) fasta scores: E(): 8.5e-45, 49.13% id in 289 aa, and to Caulobacter crescentus vanillate O-demethylase, reductase subunit cc2394 SWALL:Q9A5Q3 (EMBL:AE005908) (316 aa) fasta scores: E(): 7.6e-36, 42.81% id in 306 aa; oxidoreductase 4578623 2660293 BB4300 Bordetella bronchiseptica RB50 oxidoreductase NP_890834.1 4577679 D 257310 CDS NP_890835.1 33603275 2660954 4578737..4579471 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3711; Similar to Escherichia coli NADH pyrophosphatase NudC or b3996 SWALL:NUDC_ECOLI (SWALL:P32664) (257 aa) fasta scores: E(): 3e-27, 46.38% id in 166 aa, and to Pseudomonas aeruginosa NADH pyrophosphatase NudC or pa1823 SWALL:NUDC_PSEAE (SWALL:O86062) (278 aa) fasta scores: E(): 5.1e-35, 51.87% id in 187 aa; NADH pyrophosphatase 4579471 nudC 2660954 nudC Bordetella bronchiseptica RB50 NADH pyrophosphatase NP_890835.1 4578737 D 257310 CDS NP_890836.1 33603276 2661975 complement(4579496..4580164) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3710; Similar to Deinococcus radiodurans transcriptional regulator, tetr family dr2376 SWALL:Q9RRV9 (EMBL:AE002068) (197 aa) fasta scores: E(): 2.6e-09, 28.71% id in 195 aa, and to Mycobacterium tuberculosis hypothetical 24.1 kDa protein rv0158 or mtv032.01 or mt0167 SWALL:O53641 (EMBL:AL021927) (214 aa) fasta scores: E(): 3.7e-08, 29% id in 200 aa; TetR family transcriptional regulator 4580164 2661975 BB4302 Bordetella bronchiseptica RB50 TetR family transcriptional regulator NP_890836.1 4579496 R 257310 CDS NP_890837.1 33603277 2661976 4580491..4581684 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3709; Similar to Rhodococcus sp. AD45 racemase isoG SWALL:Q9RBP6 (EMBL:AJ249207) (405 aa) fasta scores: E(): 3.1e-50, 38% id in 400 aa, and to Streptomyces coelicolor racemase sco0362 or scf41.21 SWALL:Q9RJU8 (EMBL:AL117387) (403 aa) fasta scores: E(): 3.6e-41, 37.81% id in 402 aa; racemase 4581684 2661976 BB4303 Bordetella bronchiseptica RB50 racemase NP_890837.1 4580491 D 257310 CDS NP_890838.1 33603278 2660296 4581681..4582685 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3708; Similar to Ralstonia solanacearum probable oxidoreductase rsc1203 or rs02677 SWALL:Q8Y041 (EMBL:AL646063) (324 aa) fasta scores: E(): 6.5e-45, 42.77% id in 332 aa, and to Pseudomonas aeruginosa probable oxidoreductase pa5234 SWALL:Q9HTV6 (EMBL:AE004936) (325 aa) fasta scores: E(): 2.8e-43, 40.18% id in 331 aa; zinc-binding dehydrogenase 4582685 2660296 BB4304 Bordetella bronchiseptica RB50 zinc-binding dehydrogenase NP_890838.1 4581681 D 257310 CDS NP_890839.1 33603279 2661739 4582738..4583703 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3707; Similar to Rhizobium meliloti hypothetical protein ra1058 ra1058 or sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 7e-37, 37.29% id in 311 aa, and to Comamonas testosteroni Orf4 protein orf4 SWALL:Q9S155 (EMBL:AB024335) (325 aa) fasta scores: E(): 8.4e-35, 36.99% id in 319 aa; hypothetical protein 4583703 2661739 BB4305 Bordetella bronchiseptica RB50 hypothetical protein NP_890839.1 4582738 D 257310 CDS NP_890840.1 33603280 2661740 4583705..4584478 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3706; Similar to Clostridium acetobutylicum 3-hydroxybutyryl-CoA dehydratase crt or cac2712 SWALL:CRT_CLOAB (SWALL:P52046) (261 aa) fasta scores: E(): 2.9e-25, 39.92% id in 253 aa, and to Thermoanaerobacter tengcongensis enoyl-CoA hydratase/carnithine racemase caid or tte0544 SWALL:Q8RC92 (EMBL:AE013024) (260 aa) fasta scores: E(): 2.8e-28, 38.28% id in 256 aa; enoyl-CoA hydratase 4584478 2661740 BB4306 Bordetella bronchiseptica RB50 enoyl-CoA hydratase NP_890840.1 4583705 D 257310 CDS NP_890841.1 33603281 2661906 4584965..4585864 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3705; Similar to Rhizobium loti ATP-binding protein of ABC transporter mll1253 SWALL:Q98KZ4 (EMBL:AP002997) (267 aa) fasta scores: E(): 4.9e-42, 49.07% id in 271 aa, and to Methanococcus jannaschii hypothetical ABC transporter ATP-binding protein Mj0412 mj0412 SWALL:Y412_METJA (SWALL:Q57855) (267 aa) fasta scores: E(): 8.3e-42, 45.88% id in 255 aa; taurine ABC transporter ATP-binding protein 4585864 2661906 BB4307 Bordetella bronchiseptica RB50 taurine ABC transporter ATP-binding protein NP_890841.1 4584965 D 257310 CDS NP_890842.1 33603282 2661820 4585891..4586943 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3704; Similar to Bacillus subtilis aliphatic sulfonates binding protein precursor ssuA SWALL:SSUA_BACSU (SWALL:P40400) (332 aa) fasta scores: E(): 7.9e-10, 28.75% id in 240 aa, and to Brucella melitensis aliphatic sulfonates-binding lipoprotein bmeii0109 SWALL:Q8YDR6 (EMBL:AE009649) (319 aa) fasta scores: E(): 5.6e-09, 26.33% id in 262 aa; aliphatic sulfonate ABC transporter substrate-binding protein 4586943 2661820 BB4308 Bordetella bronchiseptica RB50 aliphatic sulfonate ABC transporter substrate-binding protein NP_890842.1 4585891 D 257310 CDS NP_890843.1 33603283 2659836 4586940..4587737 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3703; Similar to Escherichia coli taurine transport system permease tauc tauc or ssic or b0367 SWALL:TAUC_ECOLI (SWALL:Q47539) (275 aa) fasta scores: E(): 3.9e-34, 36.32% id in 256 aa, and to Escherichia coli O157:H7 taurine transport system permease tauc or z0466 or ecs0421 SWALL:Q8X5I4 (EMBL:AE005216) (275 aa) fasta scores: E(): 5.9e-34, 36.32% id in 256 aa; transport system permease 4587737 2659836 BB4309 Bordetella bronchiseptica RB50 transport system permease NP_890843.1 4586940 D 257310 CDS NP_890844.1 33603284 2659490 4587799..4588590 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3702; Similar to Ralstonia solanacearum probable transcription regulator protein rsp1506 or rs03035 SWALL:Q8XPY0 (EMBL:AL646085) (240 aa) fasta scores: E(): 3e-10, 26.33% id in 224 aa, and to Ralstonia solanacearum probable transcription regulator protein rsc1997 or rs03565 SWALL:Q8XXW6 (EMBL:AL646067) (274 aa) fasta scores: E(): 5.9e-08, 23% id in 213 aa; GntR family transcriptional regulator 4588590 2659490 BB4310 Bordetella bronchiseptica RB50 GntR family transcriptional regulator NP_890844.1 4587799 D 257310 CDS NP_890845.1 33603285 2659491 4588643..4589692 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3701; Similar to Brucella melitensis aliphatic sulfonates-binding lipoprotein bmeii0109 SWALL:Q8YDR6 (EMBL:AE009649) (319 aa) fasta scores: E(): 2.4e-13, 28.12% id in 256 aa, and to Bacillus subtilis aliphatic sulfonates binding protein precursor ssuA SWALL:SSUA_BACSU (SWALL:P40400) (332 aa) fasta scores: E(): 2.5e-12, 28.88% id in 270 aa; hypothetical protein 4589692 2659491 BB4311 Bordetella bronchiseptica RB50 hypothetical protein NP_890845.1 4588643 D 257310 CDS NP_890846.1 33603286 2660790 4589873..4590865 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3700; hypothetical protein 4590865 2660790 BB4312 Bordetella bronchiseptica RB50 hypothetical protein NP_890846.1 4589873 D 257310 CDS NP_890847.1 33603287 2660791 complement(4590878..4591708) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3699; GntR family transcriptional regulator 4591708 2660791 BB4313 Bordetella bronchiseptica RB50 GntR family transcriptional regulator NP_890847.1 4590878 R 257310 CDS NP_890848.1 33603288 2660360 complement(4591762..4592823) 1 NC_002927.3 inner membrane transport protein 4592823 2660360 BB4314 Bordetella bronchiseptica RB50 inner membrane transport protein NP_890848.1 4591762 R 257310 CDS NP_890849.1 33603289 2660960 complement(4592820..4594277) 1 NC_002927.3 sulfatase 4594277 2660960 BB4315 Bordetella bronchiseptica RB50 sulfatase NP_890849.1 4592820 R 257310 CDS NP_890850.1 33603290 2660287 complement(4594417..4596018) 1 NC_002927.3 GMC oxidoreductase 4596018 2660287 BB4316 Bordetella bronchiseptica RB50 GMC oxidoreductase NP_890850.1 4594417 R 257310 CDS NP_890851.1 33603291 2660897 complement(4596032..4596988) 1 NC_002927.3 iron-sulfur oxidoreductase subunit 4596988 2660897 BB4317 Bordetella bronchiseptica RB50 iron-sulfur oxidoreductase subunit NP_890851.1 4596032 R 257310 CDS NP_890852.1 33603292 2661117 complement(4597004..4598440) 1 NC_002927.3 dioxygenase 4598440 2661117 BB4318 Bordetella bronchiseptica RB50 dioxygenase NP_890852.1 4597004 R 257310 CDS NP_890853.1 33603293 2661118 complement(4598502..4599956) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3165; aldehyde dehydrogenase 4599956 2661118 BB4319 Bordetella bronchiseptica RB50 aldehyde dehydrogenase NP_890853.1 4598502 R 257310 CDS NP_890854.1 33603294 2661063 complement(4600250..4600894) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3166; urease accessory protein 4600894 ureG 2661063 ureG Bordetella bronchiseptica RB50 urease accessory protein NP_890854.1 4600250 R 257310 CDS NP_890855.1 33603295 2660659 complement(4600919..4601581) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3167; urease accessory protein 4601581 ureF 2660659 ureF Bordetella bronchiseptica RB50 urease accessory protein NP_890855.1 4600919 R 257310 CDS NP_890856.1 33603296 2660660 complement(4601604..4602221) 1 NC_002927.3 involved in the assembly of the urease metallocenter; possible nickel donor; urease accessory protein UreE 4602221 ureE 2660660 ureE Bordetella bronchiseptica RB50 urease accessory protein UreE NP_890856.1 4601604 R 257310 CDS NP_890857.1 33603297 2661104 complement(4602224..4603939) 1 NC_002927.3 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; urease subunit alpha 4603939 ureC 2661104 ureC Bordetella bronchiseptica RB50 urease subunit alpha NP_890857.1 4602224 R 257310 CDS NP_890858.1 33603298 2660423 complement(4603936..4604244) 1 NC_002927.3 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta); in Brucella suis the urease encoded by this operon (one of two urease-encoding operons found in its genome) is involved with urease activity, optimum growth, resistance to low-pH killing in-vitro and persistence in-vivo, while the other operon does not seem to be active; urease subunit beta 4604244 ureB 2660423 ureB Bordetella bronchiseptica RB50 urease subunit beta NP_890858.1 4603936 R 257310 CDS NP_890859.1 33603299 2660424 complement(4604261..4604878) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3170; urease accessory protein 4604878 ureJ 2660424 ureJ Bordetella bronchiseptica RB50 urease accessory protein NP_890859.1 4604261 R 257310 CDS NP_890860.1 33603300 2661077 complement(4604923..4605225) 1 NC_002927.3 UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter; urease subunit gamma 4605225 ureA 2661077 ureA Bordetella bronchiseptica RB50 urease subunit gamma NP_890860.1 4604923 R 257310 CDS NP_890861.1 33603301 2662636 complement(4605326..4606180) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3172; urease accessory protein 4606180 ureD 2662636 ureD Bordetella bronchiseptica RB50 urease accessory protein NP_890861.1 4605326 R 257310 CDS NP_890862.1 33603302 2662637 4606647..4607624 1 NC_002927.3 Previously sequenced as Bordetella bronchiseptica probable transcriptional regulator BbuR SWALL:BBUR_BORBR (SWALL:O06703) (343 aa) fasta scores: E(): 3.4e-108, 100% id in 286 aa; LysR family transcriptional regulator 4607624 bbuR 2662637 bbuR Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_890862.1 4606647 D 257310 CDS NP_890863.1 33603303 2659986 4607746..4608753 1 NC_002927.3 previously sequenced as Bordetella bronchiseptica hypothetical protein in bbur 5'region precursor SWALL:YBBU_BORBR (SWALL:O06702) (311 aa) fasta scores: E(): 1.3e-106, 100% id in 311 aa. Similar to Rhizobium meliloti hypothetical protein ra1058 or sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 3.6e-33, 37.66% id in 308 aa; hypothetical protein 4608753 2659986 BB4329 Bordetella bronchiseptica RB50 hypothetical protein NP_890863.1 4607746 D 257310 CDS NP_890864.1 33603304 2659987 4608841..4609803 1 NC_002927.3 Similar to Agrobacterium tumefaciens hypothetical protein atu4727 atu4727 or agr_l_312 SWALL:Q8U6S9 (EMBL:AE009401) (329 aa) fasta scores: E(): 4.8e-35, 38.72% id in 315 aa, and to Rhizobium meliloti hypothetical protein ra1058 ra1058 or sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 1e-31, 37.07% id in 321 aa; hypothetical protein 4609803 2659987 BB4330 Bordetella bronchiseptica RB50 hypothetical protein NP_890864.1 4608841 D 257310 CDS NP_890865.1 33603305 2659281 4609822..4610964 1 NC_002927.3 Similar to Pseudomonas aeruginosa hypothetical protein Pa1016 pa1016 SWALL:Q9I4V7 (EMBL:AE004534) (383 aa) fasta scores: E(): 2e-43, 38.7% id in 385 aa, and to Mycobacterium tuberculosis hypothetical 40.6 kDa protein ltp2 or rv3540c or mtcy03c7.16 or mt3644 SWALL:P71861 (EMBL:Z82098) (386 aa) fasta scores: E(): 1e-30, 39.74% id in 385 aa; hypothetical protein 4610964 2659281 BB4331 Bordetella bronchiseptica RB50 hypothetical protein NP_890865.1 4609822 D 257310 CDS NP_890866.1 33603306 2661152 4610961..4611377 1 NC_002927.3 Similar to Methanopyrus kandleri predicted nucleic-acid-binding protein containing a zn-ribbon mk1377 SWALL:Q8TVL2 (EMBL:AE010431) (134 aa) fasta scores: E(): 1.4e-08, 32.43% id in 111 aa, and to Thermoplasma volcanium hypothetical protein tv0134 tv0134 or tvg0142586 SWALL:Q97CG7 (EMBL:AP000991) (135 aa) fasta scores: E(): 4.1e-08, 33.05% id in 121 aa; hypothetical protein 4611377 2661152 BB4332 Bordetella bronchiseptica RB50 hypothetical protein NP_890866.1 4610961 D 257310 CDS NP_890867.1 33603307 2661153 4611374..4612570 1 NC_002927.3 Similar to Thauera aromatica BbsE SWALL:Q9KJF0 (EMBL:AF173961) (410 aa) fasta scores: E(): 4.9e-43, 38.15% id in 380 aa, and to Sphingomonas aromaticivorans hypothetical 41.0 kDa protein orf1338 SWALL:O86014 (EMBL:AF079317) (388 aa) fasta scores: E(): 4.1e-23, 31.39% id in 395 aa; subunit of succinyl-CoA:benzylsuccinate CoA-transferase 4612570 bbsE 2661153 bbsE Bordetella bronchiseptica RB50 subunit of succinyl-CoA:benzylsuccinate CoA-transferase NP_890867.1 4611374 D 257310 CDS NP_890868.1 33603308 2659118 4612567..4613781 1 NC_002927.3 Similar to Thauera aromatica BbsF SWALL:Q9KJE9 (EMBL:AF173961) (409 aa) fasta scores: E(): 2.6e-56, 42% id in 400 aa, and to Ralstonia solanacearum transmembrane protein rsc0796 or rs05041 SWALL:Q8Y194 (EMBL:AL646061) (420 aa) fasta scores: E(): 5.4e-42, 35.73% id in 417 aa; subunit of succinyl-CoA:benzylsuccinate CoA-transferase 4613781 bbsF 2659118 bbsF Bordetella bronchiseptica RB50 subunit of succinyl-CoA:benzylsuccinate CoA-transferase NP_890868.1 4612567 D 257310 CDS NP_890869.1 33603309 2659119 4613788..4614831 1 NC_002927.3 Similar to Rhizobium sp. hypothetical 33.9 kDa protein Y4mH y4mH SWALL:Y4MH_RHISN (SWALL:P55567) (297 aa) fasta scores: E(): 1.5e-05, 32.42% id in 330 aa, and to Neurospora crassa conserved hypothetical protein b11h24.110 SWALL:Q8X0J2 (EMBL:AL670005) (359 aa) fasta scores: E(): 0.00028, 24.71% id in 348 aa; hypothetical protein 4614831 2659119 BB4335 Bordetella bronchiseptica RB50 hypothetical protein NP_890869.1 4613788 D 257310 CDS NP_890870.1 33603310 2660529 complement(4615144..4615938) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3176; GntR family transcriptional regulator 4615938 2660529 BB4336 Bordetella bronchiseptica RB50 GntR family transcriptional regulator NP_890870.1 4615144 R 257310 CDS NP_890871.1 33603311 2662116 4616039..4617274 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3177; methylaspartate ammonia-lyase 4617274 2662116 BB4337 Bordetella bronchiseptica RB50 methylaspartate ammonia-lyase NP_890871.1 4616039 D 257310 CDS NP_890872.1 33603312 2662117 4617343..4618359 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3178; hypothetical protein 4618359 2662117 BB4338 Bordetella bronchiseptica RB50 hypothetical protein NP_890872.1 4617343 D 257310 CDS NP_890873.1 33603313 2662142 4618356..4619747 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3179; hypothetical protein 4619747 2662142 BB4339 Bordetella bronchiseptica RB50 hypothetical protein NP_890873.1 4618356 D 257310 CDS NP_890874.1 33603314 2662143 4619744..4620940 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3180; hypothetical protein 4620940 2662143 BB4340 Bordetella bronchiseptica RB50 hypothetical protein NP_890874.1 4619744 D 257310 CDS NP_890875.1 33603315 2661228 complement(4620937..4622475) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3181; SpoVR family protein 4622475 2661228 BB4341 Bordetella bronchiseptica RB50 SpoVR family protein NP_890875.1 4620937 R 257310 CDS NP_890876.1 33603316 2659453 complement(4622472..4623731) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3182; hypothetical protein 4623731 2659453 BB4342 Bordetella bronchiseptica RB50 hypothetical protein NP_890876.1 4622472 R 257310 CDS NP_890877.1 33603317 2659454 complement(4623744..4625723) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3183; hypothetical protein 4625723 2659454 BB4343 Bordetella bronchiseptica RB50 hypothetical protein NP_890877.1 4623744 R 257310 CDS NP_890878.1 33603318 2660965 complement(4626047..4627171) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2948; riboflavin biosynthesis protein diaminohydroxyphosphoribosylaminopyrimidine deaminase 4627171 2660965 BB4344 Bordetella bronchiseptica RB50 riboflavin biosynthesis protein diaminohydroxyphosphoribosylaminopyrimidine deaminase NP_890878.1 4626047 R 257310 CDS NP_890879.1 33603319 2661095 4627377..4627940 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2949; hypothetical protein 4627940 2661095 BB4345 Bordetella bronchiseptica RB50 hypothetical protein NP_890879.1 4627377 D 257310 CDS NP_890880.1 33603320 2661480 4627953..4628909 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2950; AraC family transcriptional regulator 4628909 2661480 BB4346 Bordetella bronchiseptica RB50 AraC family transcriptional regulator NP_890880.1 4627953 D 257310 CDS NP_890881.1 33603321 2659780 complement(4628922..4629404) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2951; transcriptional regulator NrdR 4629404 nrdR 2659780 nrdR Bordetella bronchiseptica RB50 transcriptional regulator NrdR NP_890881.1 4628922 R 257310 CDS NP_890882.1 33603322 2659781 complement(4629563..4630810) 1 NC_002927.3 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 4630810 glyA 2659781 glyA Bordetella bronchiseptica RB50 serine hydroxymethyltransferase NP_890882.1 4629563 R 257310 CDS NP_890883.1 33603323 2659538 complement(4631025..4631681) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2953; hypothetical protein 4631681 2659538 BB4349 Bordetella bronchiseptica RB50 hypothetical protein NP_890883.1 4631025 R 257310 CDS NP_890884.1 33603324 2660377 complement(4631717..4632946) 1 NC_002927.3 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 4632946 tyrS 2660377 tyrS Bordetella bronchiseptica RB50 tyrosyl-tRNA synthetase NP_890884.1 4631717 R 257310 CDS NP_890885.1 33603325 2661490 4633208..4634623 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2956; hypothetical protein 4634623 2661490 BB4351 Bordetella bronchiseptica RB50 hypothetical protein NP_890885.1 4633208 D 257310 CDS NP_890886.1 33603326 2661491 4634629..4635765 1 NC_002927.3 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase 4635765 anmK 2661491 anmK Bordetella bronchiseptica RB50 anhydro-N-acetylmuramic acid kinase NP_890886.1 4634629 D 257310 CDS NP_890887.1 33603327 2663931 complement(4635835..4636206) 1 NC_002927.3 essential respiratory protein A; may be involved in the transfer of iron-sulfur clusters; essential for growth using oxygen or alternate electron acceptors; iron-sulfur cluster insertion protein ErpA 4636206 2663931 BB4353 Bordetella bronchiseptica RB50 iron-sulfur cluster insertion protein ErpA NP_890887.1 4635835 R 257310 CDS NP_890888.1 33603328 2659805 complement(4636294..4637061) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2959; integral membrane protein 4637061 2659805 BB4354 Bordetella bronchiseptica RB50 integral membrane protein NP_890888.1 4636294 R 257310 CDS NP_890889.1 33603329 2659806 complement(4637077..4638141) 1 NC_002927.3 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase 4638141 argC 2659806 argC Bordetella bronchiseptica RB50 N-acetyl-gamma-glutamyl-phosphate reductase NP_890889.1 4637077 R 257310 CDS NP_890890.1 33603330 2659586 complement(4638330..4638722) 1 NC_002927.3 forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 4638722 rpsI 2659586 rpsI Bordetella bronchiseptica RB50 30S ribosomal protein S9 NP_890890.1 4638330 R 257310 CDS NP_890891.2 161609260 2663656 complement(4638732..4639160) 1 NC_002927.3 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 4639160 rplM 2663656 rplM Bordetella bronchiseptica RB50 50S ribosomal protein L13 NP_890891.2 4638732 R 257310 CDS NP_890892.1 33603332 2660518 complement(4639455..4640552) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2963; C4-dicarboxylate ABC transporter substrate-binding protein 4640552 2660518 BB4358 Bordetella bronchiseptica RB50 C4-dicarboxylate ABC transporter substrate-binding protein NP_890892.1 4639455 R 257310 CDS NP_890893.1 33603333 2660519 complement(4640892..4642256) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2964; hypothetical protein 4642256 2660519 BB4359 Bordetella bronchiseptica RB50 hypothetical protein NP_890893.1 4640892 R 257310 CDS NP_890894.1 33603334 2659561 4642315..4642866 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2965; hypothetical protein 4642866 2659561 BB4360 Bordetella bronchiseptica RB50 hypothetical protein NP_890894.1 4642315 D 257310 CDS NP_890895.1 33603335 2659562 4642880..4643554 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2966; carboxylesterase 4643554 2659562 BB4361 Bordetella bronchiseptica RB50 carboxylesterase NP_890895.1 4642880 D 257310 CDS NP_890896.1 33603336 2661396 4643766..4644815 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2967; hypothetical protein 4644815 2661396 BB4362 Bordetella bronchiseptica RB50 hypothetical protein NP_890896.1 4643766 D 257310 CDS NP_890897.1 33603337 2661397 4644812..4645621 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2969; ABC transporter ATP-binding protein 4645621 2661397 BB4363 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_890897.1 4644812 D 257310 CDS NP_890898.1 33603338 2659559 4645624..4646460 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2970; ABC transporter 4646460 2659559 BB4364 Bordetella bronchiseptica RB50 ABC transporter NP_890898.1 4645624 D 257310 CDS NP_890899.1 33603339 2659532 4646475..4647167 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2971; hydrolase 4647167 2659532 BB4365 Bordetella bronchiseptica RB50 hydrolase NP_890899.1 4646475 D 257310 CDS NP_890900.1 33603340 2661617 complement(4647179..4647568) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2972; hypothetical protein 4647568 2661617 BB4366 Bordetella bronchiseptica RB50 hypothetical protein NP_890900.1 4647179 R 257310 CDS NP_890901.1 33603341 2661618 complement(4647674..4649062) 1 NC_002927.3 exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA; ATP-dependent RNA helicase DbpA 4649062 dbpA 2661618 dbpA Bordetella bronchiseptica RB50 ATP-dependent RNA helicase DbpA NP_890901.1 4647674 R 257310 CDS NP_890902.1 33603342 2661107 complement(4649179..4650675) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2974; integral membrane protein 4650675 2661107 BB4368 Bordetella bronchiseptica RB50 integral membrane protein NP_890902.1 4649179 R 257310 CDS NP_890903.1 33603343 2661096 4650972..4651646 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2975; GntR family transcriptional regulator 4651646 2661096 BB4369 Bordetella bronchiseptica RB50 GntR family transcriptional regulator NP_890903.1 4650972 D 257310 CDS NP_890904.1 33603344 2661097 complement(4651643..4654102) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2977; hypothetical protein 4654102 2661097 BB4370 Bordetella bronchiseptica RB50 hypothetical protein NP_890904.1 4651643 R 257310 CDS NP_890905.1 33603345 2661098 4654199..4655644 1 NC_002927.3 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 4655644 gltX 2661098 gltX Bordetella bronchiseptica RB50 glutamyl-tRNA synthetase NP_890905.1 4654199 D 257310 CDS NP_890906.1 33603346 2661093 complement(4655648..4656850) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2979; membrane transport protein 4656850 2661093 BB4372 Bordetella bronchiseptica RB50 membrane transport protein NP_890906.1 4655648 R 257310 CDS NP_890907.1 33603347 2659743 complement(4656919..4657428) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2980; lipoprotein 4657428 2659743 BB4373 Bordetella bronchiseptica RB50 lipoprotein NP_890907.1 4656919 R 257310 CDS NP_890908.1 33603348 2660097 complement(4657637..4658089) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2981; AsnC family transcriptional regulator 4658089 2660097 BB4374 Bordetella bronchiseptica RB50 AsnC family transcriptional regulator NP_890908.1 4657637 R 257310 CDS NP_890909.1 33603349 2660098 4658218..4661724 1 NC_002927.3 catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; 2-oxoacid ferredoxin oxidoreductase 4661724 2660098 BB4375 Bordetella bronchiseptica RB50 2-oxoacid ferredoxin oxidoreductase NP_890909.1 4658218 D 257310 CDS NP_890910.1 33603350 2659051 4662030..4664957 1 NC_002927.3 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 4664957 nrdA 2659051 nrdA Bordetella bronchiseptica RB50 ribonucleotide-diphosphate reductase subunit alpha NP_890910.1 4662030 D 257310 CDS NP_890911.1 33603351 2660004 4664979..4666175 1 NC_002927.3 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit beta 4666175 nrdB 2660004 nrdB Bordetella bronchiseptica RB50 ribonucleotide-diphosphate reductase subunit beta NP_890911.1 4664979 D 257310 CDS NP_890912.1 33603352 2663901 4666493..4667170 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) bpH1; histone protein 4667170 bph1 2663901 bph1 Bordetella bronchiseptica RB50 histone protein NP_890912.1 4666493 D 257310 CDS NP_890913.1 33603353 2659616 4667309..4667884 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2986; integral membrane protein 4667884 2659616 BB4379 Bordetella bronchiseptica RB50 integral membrane protein NP_890913.1 4667309 D 257310 CDS NP_890914.1 33603354 2661121 complement(4667892..4669355) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2987; D-alanine--D-alanine ligase 4669355 dltA 2661121 dltA Bordetella bronchiseptica RB50 D-alanine--D-alanine ligase NP_890914.1 4667892 R 257310 CDS NP_890915.1 33603355 2662172 complement(4669366..4670493) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2988; protein involved in the transfer of D-alanine into teichoic acids 4670493 dltB 2662172 dltB Bordetella bronchiseptica RB50 protein involved in the transfer of D-alanine into teichoic acids NP_890915.1 4669366 R 257310 CDS NP_890916.1 33603356 2661195 complement(4670501..4670626) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2989; hypothetical protein 4670626 2661195 BB4382 Bordetella bronchiseptica RB50 hypothetical protein NP_890916.1 4670501 R 257310 CDS NP_890917.1 33603357 2662065 complement(4670623..4671750) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2990; protein involved in the transfer of D-alanine into teichoic acids 4671750 dltD 2662065 dltD Bordetella bronchiseptica RB50 protein involved in the transfer of D-alanine into teichoic acids NP_890917.1 4670623 R 257310 CDS NP_890918.1 33603358 2662066 complement(4671776..4672015) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2991; acyl-carrier protein 4672015 2662066 BB4384 Bordetella bronchiseptica RB50 acyl-carrier protein NP_890918.1 4671776 R 257310 CDS NP_890919.1 33603359 2662067 complement(4672337..4672840) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2992; lipoprotein 4672840 pcp 2662067 pcp Bordetella bronchiseptica RB50 lipoprotein NP_890919.1 4672337 R 257310 CDS NP_890920.1 33603360 2660072 complement(4673014..4673955) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2993; carbohydrate kinase 4673955 2660072 BB4386 Bordetella bronchiseptica RB50 carbohydrate kinase NP_890920.1 4673014 R 257310 CDS NP_890921.1 33603361 2660073 complement(4673967..4675076) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2994; hypothetical protein 4675076 2660073 BB4387 Bordetella bronchiseptica RB50 hypothetical protein NP_890921.1 4673967 R 257310 CDS NP_890922.1 33603362 2662086 complement(4675102..4676025) 1 NC_002927.3 methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; 50S ribosomal protein L11 methyltransferase 4676025 prmA 2662086 prmA Bordetella bronchiseptica RB50 50S ribosomal protein L11 methyltransferase NP_890922.1 4675102 R 257310 CDS NP_890923.1 33603363 2661935 complement(4676044..4677390) 1 NC_002927.3 an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit 4677390 fabG 2661935 fabG Bordetella bronchiseptica RB50 acetyl-CoA carboxylase biotin carboxylase subunit NP_890923.1 4676044 R 257310 CDS NP_890924.1 33603364 2662608 complement(4677400..4677849) 1 NC_002927.3 composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit 4677849 fabE 2662608 fabE Bordetella bronchiseptica RB50 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit NP_890924.1 4677400 R 257310 CDS NP_890925.1 33603365 2661123 complement(4677939..4678373) 1 NC_002927.3 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 4678373 aroQ 2661123 aroQ Bordetella bronchiseptica RB50 3-dehydroquinate dehydratase NP_890925.1 4677939 R 257310 CDS NP_890926.1 33603366 2661978 complement(4678452..4679000) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2999; thioredoxin 4679000 2661978 BB4392 Bordetella bronchiseptica RB50 thioredoxin NP_890926.1 4678452 R 257310 CDS NP_890927.1 33603367 2661046 4679083..4680453 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3000; UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 4680453 mpl 2661046 mpl Bordetella bronchiseptica RB50 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase NP_890927.1 4679083 D 257310 CDS NP_890928.1 33603368 2661047 4680464..4681057 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3001; hypothetical protein 4681057 2661047 BB4394 Bordetella bronchiseptica RB50 hypothetical protein NP_890928.1 4680464 D 257310 CDS NP_890929.1 33603369 2661450 4681129..4683012 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3002; hypothetical protein 4683012 2661450 BB4395 Bordetella bronchiseptica RB50 hypothetical protein NP_890929.1 4681129 D 257310 CDS NP_890930.1 33603370 2661451 4683050..4683949 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3003; hypothetical protein 4683949 2661451 BB4396 Bordetella bronchiseptica RB50 hypothetical protein NP_890930.1 4683050 D 257310 CDS NP_890931.1 33603371 2660716 4683946..4684809 1 NC_002927.3 AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase 4684809 aroE 2660716 aroE Bordetella bronchiseptica RB50 shikimate 5-dehydrogenase NP_890931.1 4683946 D 257310 CDS NP_890932.1 33603372 2660717 4684830..4685558 1 NC_002927.3 glycosyltransferase; polymerizes glycan strands in the peptidoglycan; monofunctional biosynthetic peptidoglycan transglycosylase 4685558 mtgA 2660717 mtgA Bordetella bronchiseptica RB50 monofunctional biosynthetic peptidoglycan transglycosylase NP_890932.1 4684830 D 257310 CDS NP_890933.1 33603373 2659787 4685565..4686833 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0325; hypothetical protein 4686833 2659787 BB4399 Bordetella bronchiseptica RB50 hypothetical protein NP_890933.1 4685565 D 257310 CDS NP_890934.1 33603374 2661042 4686830..4687663 1 NC_002927.3 hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP; diadenosine tetraphosphatase 4687663 apaH 2661042 apaH Bordetella bronchiseptica RB50 diadenosine tetraphosphatase NP_890934.1 4686830 D 257310 CDS NP_890935.1 33603375 2659885 complement(4687700..4688440) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0323; acyltransferase 4688440 2659885 BB4401 Bordetella bronchiseptica RB50 acyltransferase NP_890935.1 4687700 R 257310 CDS NP_890936.1 33603376 2661296 complement(4688437..4689735) 1 NC_002927.3 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase 4689735 pyrC 2661296 pyrC Bordetella bronchiseptica RB50 dihydroorotase NP_890936.1 4688437 R 257310 CDS NP_890937.1 33603377 2660325 complement(4689732..4690685) 1 NC_002927.3 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 4690685 pyrB 2660325 pyrB Bordetella bronchiseptica RB50 aspartate carbamoyltransferase catalytic subunit NP_890937.1 4689732 R 257310 CDS NP_890938.1 33603378 2660337 complement(4690699..4691100) 1 NC_002927.3 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 4691100 2660337 BB4404 Bordetella bronchiseptica RB50 Holliday junction resolvase-like protein NP_890938.1 4690699 R 257310 CDS NP_890939.2 161609259 2660338 complement(4691093..4691698) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0319; hypothetical protein 4691698 2660338 BB4405 Bordetella bronchiseptica RB50 hypothetical protein NP_890939.2 4691093 R 257310 CDS NP_890940.1 33603380 2661105 complement(4691786..4691950) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0318; rubredoxin 4691950 rubA 2661105 rubA Bordetella bronchiseptica RB50 rubredoxin NP_890940.1 4691786 R 257310 CDS NP_890941.1 33603381 2660525 4692067..4692915 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0317; phosphomethylpyrimidine kinase 4692915 thiD 2660525 thiD Bordetella bronchiseptica RB50 phosphomethylpyrimidine kinase NP_890941.1 4692067 D 257310 CDS NP_890942.1 33603382 2660526 4692912..4693565 1 NC_002927.3 Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate; thiamine-phosphate pyrophosphorylase 4693565 thiE 2660526 thiE Bordetella bronchiseptica RB50 thiamine-phosphate pyrophosphorylase NP_890942.1 4692912 D 257310 CDS NP_890943.1 33603383 2660569 4693582..4694865 1 NC_002927.3 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase 4694865 hemL 2660569 hemL Bordetella bronchiseptica RB50 glutamate-1-semialdehyde aminotransferase NP_890943.1 4693582 D 257310 CDS NP_890944.1 33603384 2660504 4695105..4696730 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0314; hypothetical protein 4696730 2660504 BB4410 Bordetella bronchiseptica RB50 hypothetical protein NP_890944.1 4695105 D 257310 CDS NP_890945.1 33603385 2660505 complement(4696824..4697225) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0313; hypothetical protein 4697225 2660505 BB4411 Bordetella bronchiseptica RB50 hypothetical protein NP_890945.1 4696824 R 257310 CDS NP_890946.1 33603386 2660835 complement(4697250..4697684) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0312; 4-hydroxybenzoyl CoA thioesterase 4697684 2660835 BB4412 Bordetella bronchiseptica RB50 4-hydroxybenzoyl CoA thioesterase NP_890946.1 4697250 R 257310 CDS NP_890947.1 33603387 2660844 complement(4697686..4699335) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0311; acid-coenzyme A ligase 4699335 2660844 BB4413 Bordetella bronchiseptica RB50 acid-coenzyme A ligase NP_890947.1 4697686 R 257310 CDS NP_890948.1 33603388 2660845 complement(4699376..4700545) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0310; acyl-CoA dehydrogenase 4700545 2660845 BB4414 Bordetella bronchiseptica RB50 acyl-CoA dehydrogenase NP_890948.1 4699376 R 257310 CDS NP_890949.1 33603389 2659425 complement(4700548..4701405) 1 NC_002927.3 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 4701405 2659425 BB4415 Bordetella bronchiseptica RB50 enoyl-CoA hydratase NP_890949.1 4700548 R 257310 CDS NP_890950.1 33603390 2659426 complement(4701427..4702218) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0308; short chain dehydrogenase 4702218 2659426 BB4416 Bordetella bronchiseptica RB50 short chain dehydrogenase NP_890950.1 4701427 R 257310 CDS NP_890951.1 33603391 2661403 complement(4702215..4704566) 1 NC_002927.3 catalyzes the conversion of salicylyl-CoA to gentisyl-CoA; salicylyl-CoA 5-hydroxylase 4704566 2661403 BB4417 Bordetella bronchiseptica RB50 salicylyl-CoA 5-hydroxylase NP_890951.1 4702215 R 257310 CDS NP_890952.1 33603392 2663914 complement(4704772..4705365) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0305; high-affinity branched-chain amino acid transporter ATP-binding protein 4705365 2663914 BB4418 Bordetella bronchiseptica RB50 high-affinity branched-chain amino acid transporter ATP-binding protein NP_890952.1 4704772 R 257310 CDS NP_890953.1 33603393 2663915 complement(4705470..4706264) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0304; branched-chain amino acid transporter ATP-binding protein 4706264 2663915 BB4419 Bordetella bronchiseptica RB50 branched-chain amino acid transporter ATP-binding protein NP_890953.1 4705470 R 257310 CDS NP_890954.1 33603394 2659991 complement(4706261..4707226) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0303; branched chain amino acid ABC transporter permease 4707226 2659991 BB4420 Bordetella bronchiseptica RB50 branched chain amino acid ABC transporter permease NP_890954.1 4706261 R 257310 CDS NP_890955.1 33603395 2658987 complement(4707230..4708150) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0302; branched chain amino acid ABC transporter permease 4708150 2658987 BB4421 Bordetella bronchiseptica RB50 branched chain amino acid ABC transporter permease NP_890955.1 4707230 R 257310 CDS NP_890956.1 33603396 2661259 complement(4708247..4709410) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0301; ABC transporter substrate-binding protein 4709410 2661259 BB4422 Bordetella bronchiseptica RB50 ABC transporter substrate-binding protein NP_890956.1 4708247 R 257310 CDS NP_890957.1 33603397 2661260 4709633..4710523 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0300; esterase 4710523 2661260 BB4423 Bordetella bronchiseptica RB50 esterase NP_890957.1 4709633 D 257310 CDS NP_890958.1 33603398 2661261 4710527..4711030 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0299; MarR family transcriptional regulator 4711030 2661261 BB4424 Bordetella bronchiseptica RB50 MarR family transcriptional regulator NP_890958.1 4710527 D 257310 CDS NP_890959.1 33603399 2660105 4711073..4712071 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0298; hypothetical protein 4712071 2660105 BB4425 Bordetella bronchiseptica RB50 hypothetical protein NP_890959.1 4711073 D 257310 CDS NP_890960.1 33603400 2659614 4712139..4713365 1 NC_002927.3 bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase 4713365 argJ 2659614 argJ Bordetella bronchiseptica RB50 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase NP_890960.1 4712139 D 257310 CDS NP_890961.1 33603401 2659777 4713565..4714431 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3808; hypothetical protein 4714431 2659777 BB4427 Bordetella bronchiseptica RB50 hypothetical protein NP_890961.1 4713565 D 257310 CDS NP_890962.1 33603402 2659778 4714424..4715386 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3809; hypothetical protein 4715386 2659778 BB4428 Bordetella bronchiseptica RB50 hypothetical protein NP_890962.1 4714424 D 257310 CDS NP_890963.1 33603403 2662075 complement(4715397..4716899) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3812; outer membrane efflux protein 4716899 2662075 BB4429 Bordetella bronchiseptica RB50 outer membrane efflux protein NP_890963.1 4715397 R 257310 CDS NP_890964.1 33603404 2659388 complement(4716896..4720003) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3813; AcrB/AcrD/AcrF family protein 4720003 2659388 BB4430 Bordetella bronchiseptica RB50 AcrB/AcrD/AcrF family protein NP_890964.1 4716896 R 257310 CDS NP_890965.1 33603405 2662023 complement(4720000..4723101) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3814; AcrB/AcrD/AcrF family protein 4723101 2662023 BB4431 Bordetella bronchiseptica RB50 AcrB/AcrD/AcrF family protein NP_890965.1 4720000 R 257310 CDS NP_890966.1 33603406 2662016 complement(4723098..4724348) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3815; hemolysin D 4724348 2662016 BB4432 Bordetella bronchiseptica RB50 hemolysin D NP_890966.1 4723098 R 257310 CDS NP_890967.1 33603407 2661969 complement(4724529..4725290) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3816; hypothetical protein 4725290 2661969 BB4433 Bordetella bronchiseptica RB50 hypothetical protein NP_890967.1 4724529 R 257310 CDS NP_890968.1 33603408 2662739 complement(4725323..4725973) 1 NC_002927.3 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 4725973 coaE 2662739 coaE Bordetella bronchiseptica RB50 dephospho-CoA kinase NP_890968.1 4725323 R 257310 CDS NP_890969.1 33603409 2661872 complement(4725976..4726815) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3818; type 4 prepilin-like proteins leader peptide processing enzyme 4726815 2661872 BB4435 Bordetella bronchiseptica RB50 type 4 prepilin-like proteins leader peptide processing enzyme NP_890969.1 4725976 R 257310 CDS NP_890970.1 33603410 2661804 4727056..4727799 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3819; hypothetical protein 4727799 2661804 BB4436 Bordetella bronchiseptica RB50 hypothetical protein NP_890970.1 4727056 D 257310 CDS NP_890971.1 33603411 2660361 complement(4727882..4728229) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3820; regulatory protein 4728229 2660361 BB4437 Bordetella bronchiseptica RB50 regulatory protein NP_890971.1 4727882 R 257310 CDS NP_890972.1 33603412 2660362 complement(4728327..4729169) 1 NC_002927.3 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 4729169 panC 2660362 panC Bordetella bronchiseptica RB50 pantoate--beta-alanine ligase NP_890972.1 4728327 R 257310 CDS NP_890973.1 33603413 2662522 complement(4729214..4730101) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3822; hypothetical protein 4730101 2662522 BB4439 Bordetella bronchiseptica RB50 hypothetical protein NP_890973.1 4729214 R 257310 CDS NP_890974.1 33603414 2662523 complement(4730128..4730316) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3823; hypothetical protein 4730316 2662523 BB4440 Bordetella bronchiseptica RB50 hypothetical protein NP_890974.1 4730128 R 257310 CDS NP_890975.1 33603415 2661807 4730414..4731871 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3824; transporter 4731871 2661807 BB4441 Bordetella bronchiseptica RB50 transporter NP_890975.1 4730414 D 257310 CDS NP_890976.1 33603416 2661068 4731858..4733384 1 NC_002927.3 Converts glycerol and ADP to glycerol-3-phosphate and ADP; glycerol kinase 4733384 glpK 2661068 glpK Bordetella bronchiseptica RB50 glycerol kinase NP_890976.1 4731858 D 257310 CDS NP_890977.1 33603417 2660380 complement(4733403..4733870) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3826; hypothetical protein 4733870 2660380 BB4443 Bordetella bronchiseptica RB50 hypothetical protein NP_890977.1 4733403 R 257310 CDS NP_890978.1 33603418 2660381 complement(4733870..4734892) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3827; hypothetical protein 4734892 2660381 BB4444 Bordetella bronchiseptica RB50 hypothetical protein NP_890978.1 4733870 R 257310 CDS NP_890979.1 33603419 2661614 complement(4735013..4735753) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3828; amino acid ABC transporter ATP-binding protein 4735753 2661614 BB4445 Bordetella bronchiseptica RB50 amino acid ABC transporter ATP-binding protein NP_890979.1 4735013 R 257310 CDS NP_890980.1 33603420 2659462 complement(4735808..4736908) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3829; amino acid ABC transporter permease 4736908 2659462 BB4446 Bordetella bronchiseptica RB50 amino acid ABC transporter permease NP_890980.1 4735808 R 257310 CDS NP_890981.1 33603421 2660520 complement(4736910..4738100) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3830; amino acid ABC transporter permease 4738100 2660520 BB4447 Bordetella bronchiseptica RB50 amino acid ABC transporter permease NP_890981.1 4736910 R 257310 CDS NP_890982.1 33603422 2660888 complement(4738220..4739236) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3831; amino acid ABC transporter substrate-binding protein 4739236 2660888 BB4448 Bordetella bronchiseptica RB50 amino acid ABC transporter substrate-binding protein NP_890982.1 4738220 R 257310 CDS NP_890983.1 33603423 2659920 4739555..4740226 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3832; cell division ATP-binding protein 4740226 ftsE 2659920 ftsE Bordetella bronchiseptica RB50 cell division ATP-binding protein NP_890983.1 4739555 D 257310 CDS NP_890984.1 33603424 2659959 4740223..4741131 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3833; permease 4741131 2659959 BB4450 Bordetella bronchiseptica RB50 permease NP_890984.1 4740223 D 257310 CDS NP_890985.1 33603425 2661541 4741343..4742023 1 NC_002927.3 catalyzes the conversion of glutamine residues to glutamate on methyl-accepting chemotaxis receptors; chemoreceptor glutamine deamidase CheD 4742023 2661541 BB4451 Bordetella bronchiseptica RB50 chemoreceptor glutamine deamidase CheD NP_890985.1 4741343 D 257310 CDS NP_890986.1 33603426 2660035 complement(4742114..4745722) 1 NC_002927.3 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; indolepyruvate ferredoxin oxidoreductase 4745722 2660035 BB4452 Bordetella bronchiseptica RB50 indolepyruvate ferredoxin oxidoreductase NP_890986.1 4742114 R 257310 CDS NP_890987.1 33603427 2660036 4745871..4746947 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3836; A/G-specific adenine glycosylase 4746947 mutY 2660036 mutY Bordetella bronchiseptica RB50 A/G-specific adenine glycosylase NP_890987.1 4745871 D 257310 CDS NP_890988.1 33603428 2659124 complement(4746958..4747767) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3837; hypothetical protein 4747767 2659124 BB4454 Bordetella bronchiseptica RB50 hypothetical protein NP_890988.1 4746958 R 257310 CDS NP_890989.1 33603429 2659125 4747857..4748630 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3838; ubiE/COQ5 methyltransferase family protein 4748630 2659125 BB4455 Bordetella bronchiseptica RB50 ubiE/COQ5 methyltransferase family protein NP_890989.1 4747857 D 257310 CDS NP_890990.1 33603430 2659721 complement(4748752..4752525) 1 NC_002927.3 one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity; B12-dependent methionine synthase 4752525 metH 2659721 metH Bordetella bronchiseptica RB50 B12-dependent methionine synthase NP_890990.1 4748752 R 257310 CDS NP_890991.1 33603431 2662042 4752862..4754751 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3595; outer membrane protein 4754751 2662042 BB4457 Bordetella bronchiseptica RB50 outer membrane protein NP_890991.1 4752862 D 257310 CDS NP_890992.1 33603432 2662043 4754763..4755656 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3596; cobalamin ABC transporter substrate-binding protein 4755656 2662043 BB4458 Bordetella bronchiseptica RB50 cobalamin ABC transporter substrate-binding protein NP_890992.1 4754763 D 257310 CDS NP_890993.1 33603433 2662033 4755682..4756557 1 NC_002927.3 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase 4756557 thiG 2662033 thiG Bordetella bronchiseptica RB50 thiazole synthase NP_890993.1 4755682 D 257310 CDS NP_890994.1 33603434 2662034 4756554..4757405 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3598; phosphomethylpyrimidine kinase 4757405 thiD 2662034 thiD Bordetella bronchiseptica RB50 phosphomethylpyrimidine kinase NP_890994.1 4756554 D 257310 CDS NP_890995.1 33603435 2662035 4757467..4758147 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3599; protein-L-isoaspartate O-methyltransferase 4758147 2662035 BB4461 Bordetella bronchiseptica RB50 protein-L-isoaspartate O-methyltransferase NP_890995.1 4757467 D 257310 CDS NP_890996.1 33603436 2659201 4758151..4759470 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3600; outer membrane protein 4759470 2659201 BB4462 Bordetella bronchiseptica RB50 outer membrane protein NP_890996.1 4758151 D 257310 CDS NP_890997.1 33603437 2659357 complement(4759491..4759979) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3602; cytidylyltransferase 4759979 2659357 BB4463 Bordetella bronchiseptica RB50 cytidylyltransferase NP_890997.1 4759491 R 257310 CDS NP_890998.1 33603438 2659358 complement(4760177..4761055) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0165; hypothetical protein 4761055 2659358 BB4464 Bordetella bronchiseptica RB50 hypothetical protein NP_890998.1 4760177 R 257310 CDS NP_890999.1 33603439 2663608 complement(4761230..4762792) 1 NC_002927.3 an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone; functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis; similar to eukaryotic proteins that exhibit kinase functions; ubiquinone biosynthesis protein UbiB 4762792 ubiB 2663608 ubiB Bordetella bronchiseptica RB50 ubiquinone biosynthesis protein UbiB NP_890999.1 4761230 R 257310 CDS NP_891000.1 33603440 2662698 complement(4762789..4763424) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0163; hypothetical protein 4763424 2662698 BB4466 Bordetella bronchiseptica RB50 hypothetical protein NP_891000.1 4762789 R 257310 CDS NP_891001.1 33603441 2662699 complement(4763653..4764675) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0162; hypothetical protein 4764675 2662699 BB4467 Bordetella bronchiseptica RB50 hypothetical protein NP_891001.1 4763653 R 257310 CDS NP_891002.1 33603442 2662700 complement(4764841..4765617) 1 NC_002927.3 Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase 4765617 ubiE 2662700 ubiE Bordetella bronchiseptica RB50 ubiquinone/menaquinone biosynthesis methyltransferase NP_891002.1 4764841 R 257310 CDS NP_891003.1 33603443 2662760 4765784..4766482 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0160; phosphate regulon transcriptional regulatory protein 4766482 phoB 2662760 phoB Bordetella bronchiseptica RB50 phosphate regulon transcriptional regulatory protein NP_891003.1 4765784 D 257310 CDS NP_891004.1 33603444 2662722 4766494..4767804 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0159; phosphate regulon sensor protein 4767804 phoR 2662722 phoR Bordetella bronchiseptica RB50 phosphate regulon sensor protein NP_891004.1 4766494 D 257310 CDS NP_891005.1 33603445 2662806 4767860..4768537 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0158; two-component response regulator 4768537 2662806 BB4471 Bordetella bronchiseptica RB50 two-component response regulator NP_891005.1 4767860 D 257310 CDS NP_891006.1 33603446 2662836 4768534..4769931 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0157; two-component sensor kinase 4769931 2662836 BB4472 Bordetella bronchiseptica RB50 two-component sensor kinase NP_891006.1 4768534 D 257310 CDS NP_891007.1 33603447 2662892 4770037..4770498 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0156; hypothetical protein 4770498 2662892 BB4473 Bordetella bronchiseptica RB50 hypothetical protein NP_891007.1 4770037 D 257310 CDS NP_891008.1 33603448 2662893 4770579..4771799 1 NC_002927.3 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 4771799 serA 2662893 serA Bordetella bronchiseptica RB50 D-3-phosphoglycerate dehydrogenase NP_891008.1 4770579 D 257310 CDS NP_891009.1 33603449 2662993 complement(4771888..4772763) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0154; LysR family transcriptional regulator 4772763 brg1 2662993 brg1 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_891009.1 4771888 R 257310 CDS NP_891010.1 33603450 2663170 4772865..4773296 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0153; dioxygenase 4773296 2663170 BB4476 Bordetella bronchiseptica RB50 dioxygenase NP_891010.1 4772865 D 257310 CDS NP_891011.1 33603451 2663171 4773315..4774049 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0152; hypothetical protein 4774049 2663171 BB4477 Bordetella bronchiseptica RB50 hypothetical protein NP_891011.1 4773315 D 257310 CDS NP_891012.1 33603452 2663172 4774046..4775059 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0151; hypothetical protein 4775059 2663172 BB4478 Bordetella bronchiseptica RB50 hypothetical protein NP_891012.1 4774046 D 257310 CDS NP_891013.1 33603453 2663271 4775056..4775814 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0150; LamB/YcsF family protein 4775814 2663271 BB4479 Bordetella bronchiseptica RB50 LamB/YcsF family protein NP_891013.1 4775056 D 257310 CDS NP_891014.1 33603454 2663239 complement(4775825..4776607) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0149; transcriptional regulator 4776607 2663239 BB4480 Bordetella bronchiseptica RB50 transcriptional regulator NP_891014.1 4775825 R 257310 CDS NP_891015.1 33603455 2663240 4776774..4777697 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0148; hypothetical protein 4777697 2663240 BB4481 Bordetella bronchiseptica RB50 hypothetical protein NP_891015.1 4776774 D 257310 CDS NP_891016.1 33603456 2663468 4777760..4778980 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0146; hydroxylase 4778980 2663468 BB4482 Bordetella bronchiseptica RB50 hydroxylase NP_891016.1 4777760 D 257310 CDS NP_891017.1 33603457 2663469 4779001..4779813 1 NC_002927.3 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 4779813 2663469 BB4483 Bordetella bronchiseptica RB50 enoyl-CoA hydratase NP_891017.1 4779001 D 257310 CDS NP_891018.1 33603458 2663311 4779819..4780754 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0144; lipase 4780754 2663311 BB4484 Bordetella bronchiseptica RB50 lipase NP_891018.1 4779819 D 257310 CDS NP_891019.1 33603459 2663312 4780768..4781961 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0143; hypothetical protein 4781961 2663312 BB4485 Bordetella bronchiseptica RB50 hypothetical protein NP_891019.1 4780768 D 257310 CDS NP_891020.1 33603460 2661116 complement(4782049..4782834) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0142; GntR family transcriptional regulator 4782834 2661116 BB4486 Bordetella bronchiseptica RB50 GntR family transcriptional regulator NP_891020.1 4782049 R 257310 CDS NP_891021.1 33603461 2661112 complement(4782887..4786849) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0141; iron-sulfur binding oxidase 4786849 2661112 BB4487 Bordetella bronchiseptica RB50 iron-sulfur binding oxidase NP_891021.1 4782887 R 257310 CDS NP_891022.1 33603462 2661060 complement(4786973..4787509) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0140; hypothetical protein 4787509 2661060 BB4488 Bordetella bronchiseptica RB50 hypothetical protein NP_891022.1 4786973 R 257310 CDS NP_891023.1 33603463 2659582 4787596..4789104 1 NC_002927.3 threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway; threonine dehydratase 4789104 ilvA 2659582 ilvA Bordetella bronchiseptica RB50 threonine dehydratase NP_891023.1 4787596 D 257310 CDS NP_891024.1 33603464 2662082 complement(4789229..4790335) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0267+BP0138; outer membrane porin 4790335 2662082 BB4490 Bordetella bronchiseptica RB50 outer membrane porin NP_891024.1 4789229 R 257310 CDS NP_891025.1 33603465 2660793 complement(4790545..4790928) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0266; hypothetical protein 4790928 2660793 BB4491 Bordetella bronchiseptica RB50 hypothetical protein NP_891025.1 4790545 R 257310 CDS NP_891026.1 33603466 2660760 4791172..4792062 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0265; LysR family transcriptional regulator 4792062 2660760 BB4492 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_891026.1 4791172 D 257310 CDS NP_891027.1 33603467 2659497 complement(4792075..4792650) 1 NC_002927.3 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 4792650 apt 2659497 apt Bordetella bronchiseptica RB50 adenine phosphoribosyltransferase NP_891027.1 4792075 R 257310 CDS NP_891028.1 33603468 2660937 complement(4792686..4794386) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0263; ABC transporter ATP-binding protein 4794386 2660937 BB4494 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_891028.1 4792686 R 257310 CDS NP_891029.1 33603469 2661964 complement(4794383..4796134) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0262; ABC transporter ATP-binding protein 4796134 2661964 BB4495 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_891029.1 4794383 R 257310 CDS NP_891030.1 33603470 2659985 complement(4796131..4796256) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0261; hypothetical protein 4796256 2659985 BB4496 Bordetella bronchiseptica RB50 hypothetical protein NP_891030.1 4796131 R 257310 CDS NP_891031.1 33603471 2661980 complement(4796270..4797424) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0260; cytochrome D ubiquinol oxidase subunit II 4797424 cydB 2661980 cydB Bordetella bronchiseptica RB50 cytochrome D ubiquinol oxidase subunit II NP_891031.1 4796270 R 257310 CDS NP_891032.1 33603472 2662105 complement(4797440..4799059) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0259; cytochrome D ubiquinol oxidase subunit I 4799059 cydA 2662105 cydA Bordetella bronchiseptica RB50 cytochrome D ubiquinol oxidase subunit I NP_891032.1 4797440 R 257310 CDS NP_891033.1 33603473 2659277 complement(4799143..4799688) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0258; hypothetical protein 4799688 2659277 BB4499 Bordetella bronchiseptica RB50 hypothetical protein NP_891033.1 4799143 R 257310 CDS NP_891034.1 33603474 2663424 complement(4799831..4801051) 1 NC_002927.3 non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis; phosphoribosylglycinamide formyltransferase 2 4801051 purT 2663424 purT Bordetella bronchiseptica RB50 phosphoribosylglycinamide formyltransferase 2 NP_891034.1 4799831 R 257310 CDS NP_891035.1 33603475 2663425 4801157..4802146 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0701; hypothetical protein 4802146 2663425 BB4501 Bordetella bronchiseptica RB50 hypothetical protein NP_891035.1 4801157 D 257310 CDS NP_891036.1 33603476 2663833 4802143..4802751 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0700; hydrolase 4802751 2663833 BB4502 Bordetella bronchiseptica RB50 hydrolase NP_891036.1 4802143 D 257310 CDS NP_891037.1 33603477 2660899 4802764..4803393 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0699; hypothetical protein 4803393 2660899 BB4503 Bordetella bronchiseptica RB50 hypothetical protein NP_891037.1 4802764 D 257310 CDS NP_891038.1 33603478 2660900 4803390..4804010 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0698; hypothetical protein 4804010 2660900 BB4504 Bordetella bronchiseptica RB50 hypothetical protein NP_891038.1 4803390 D 257310 CDS NP_891039.1 33603479 2661087 4804042..4804833 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0697; ABC transporter 4804833 2661087 BB4505 Bordetella bronchiseptica RB50 ABC transporter NP_891039.1 4804042 D 257310 CDS NP_891040.1 33603480 2661078 4805069..4805407 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0696; sigma(54) modulation protein 4805407 rpoN 2661078 rpoN Bordetella bronchiseptica RB50 sigma(54) modulation protein NP_891040.1 4805069 D 257310 CDS NP_891041.1 33603481 2661079 4805675..4806139 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0694; nitrogen regulatory IIA protein 4806139 rpoP 2661079 rpoP Bordetella bronchiseptica RB50 nitrogen regulatory IIA protein NP_891041.1 4805675 D 257310 CDS NP_891042.1 33603482 2661069 4806158..4807084 1 NC_002927.3 catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system; HPr kinase/phosphorylase 4807084 2661069 BB4508 Bordetella bronchiseptica RB50 HPr kinase/phosphorylase NP_891042.1 4806158 D 257310 CDS NP_891043.1 33603483 2661043 complement(4807188..4808474) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0692; cytochrome C 4808474 2661043 BB4509 Bordetella bronchiseptica RB50 cytochrome C NP_891043.1 4807188 R 257310 CDS NP_891044.1 33603484 2660341 complement(4808485..4809237) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0691; cytochrome C 4809237 2660341 BB4510 Bordetella bronchiseptica RB50 cytochrome C NP_891044.1 4808485 R 257310 CDS NP_891045.1 33603485 2660795 4809409..4810281 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0690; hypothetical protein 4810281 2660795 BB4511 Bordetella bronchiseptica RB50 hypothetical protein NP_891045.1 4809409 D 257310 CDS NP_891046.1 33603486 2660901 4810278..4811228 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0689; lipoprotein 4811228 2660901 BB4512 Bordetella bronchiseptica RB50 lipoprotein NP_891046.1 4810278 D 257310 CDS NP_891047.1 33603487 2660902 complement(4811225..4811797) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0391; methylated-DNA--protein-cysteine methyltransferase 4811797 ogt 2660902 ogt Bordetella bronchiseptica RB50 methylated-DNA--protein-cysteine methyltransferase NP_891047.1 4811225 R 257310 CDS NP_891048.1 33603488 2661135 complement(4811794..4812732) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0390; tetrapyrrole methylase 4812732 2661135 BB4514 Bordetella bronchiseptica RB50 tetrapyrrole methylase NP_891048.1 4811794 R 257310 CDS NP_891049.1 33603489 2660459 4812799..4813332 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0389; hypothetical protein 4813332 2660459 BB4515 Bordetella bronchiseptica RB50 hypothetical protein NP_891049.1 4812799 D 257310 CDS NP_891050.1 33603490 2660635 4813332..4813934 1 NC_002927.3 catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate; phosphoheptose isomerase 4813934 2660635 BB4516 Bordetella bronchiseptica RB50 phosphoheptose isomerase NP_891050.1 4813332 D 257310 CDS NP_891051.1 33603491 2660636 4813931..4814674 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0387; hypothetical protein 4814674 2660636 BB4517 Bordetella bronchiseptica RB50 hypothetical protein NP_891051.1 4813931 D 257310 CDS NP_891052.1 33603492 2660527 4814671..4815162 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0386; thioredoxin 4815162 2660527 BB4518 Bordetella bronchiseptica RB50 thioredoxin NP_891052.1 4814671 D 257310 CDS NP_891053.1 33603493 2660644 complement(4815319..4816107) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0385; hypothetical protein 4816107 2660644 BB4519 Bordetella bronchiseptica RB50 hypothetical protein NP_891053.1 4815319 R 257310 CDS NP_891054.1 33603494 2660645 4816369..4817271 1 NC_002927.3 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 4817271 argB 2660645 argB Bordetella bronchiseptica RB50 acetylglutamate kinase NP_891054.1 4816369 D 257310 CDS NP_891055.1 33603495 2660746 4817271..4818017 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0382; hydrolase 4818017 2660746 BB4521 Bordetella bronchiseptica RB50 hydrolase NP_891055.1 4817271 D 257310 CDS NP_891056.2 161609258 2660747 4818067..4818642 1 NC_002927.3 FtsZ binding protein; synthetically lethal with a defect in the Min system; this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly; nucleoid occlusion protein 4818642 slmA 2660747 slmA Bordetella bronchiseptica RB50 nucleoid occlusion protein NP_891056.2 4818067 D 257310 CDS NP_891057.1 33603497 2660752 4818855..4820348 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0380; Sodium:sulfate symportert 4820348 2660752 BB4523 Bordetella bronchiseptica RB50 Sodium:sulfate symportert NP_891057.1 4818855 D 257310 CDS NP_891058.1 33603498 2659960 4820359..4821414 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0379; L-lactate dehydrogenase 4821414 ldh 2659960 ldh Bordetella bronchiseptica RB50 L-lactate dehydrogenase NP_891058.1 4820359 D 257310 CDS NP_891059.1 33603499 2661582 complement(4821440..4822576) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0378; rod shape-determining protein 4822576 mrdB 2661582 mrdB Bordetella bronchiseptica RB50 rod shape-determining protein NP_891059.1 4821440 R 257310 CDS NP_891060.1 33603500 2659557 complement(4822573..4824525) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0377; penicillin-binding protein 2 4824525 mrdA 2659557 mrdA Bordetella bronchiseptica RB50 penicillin-binding protein 2 NP_891060.1 4822573 R 257310 CDS NP_891061.1 33603501 2662219 complement(4824539..4825102) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0376; rod shape-determining protein 4825102 mreD 2662219 mreD Bordetella bronchiseptica RB50 rod shape-determining protein NP_891061.1 4824539 R 257310 CDS NP_891062.1 33603502 2660427 complement(4825089..4825973) 1 NC_002927.3 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 4825973 mreC 2660427 mreC Bordetella bronchiseptica RB50 rod shape-determining protein MreC NP_891062.1 4825089 R 257310 CDS NP_891063.1 33603503 2660428 complement(4826062..4827105) 1 NC_002927.3 functions in MreBCD complex in some organisms; rod shape-determining protein MreB 4827105 mreB 2660428 mreB Bordetella bronchiseptica RB50 rod shape-determining protein MreB NP_891063.1 4826062 R 257310 CDS NP_891064.2 161609257 2658954 4827336..4827644 1 NC_002927.3 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C 4827644 gatC 2658954 gatC Bordetella bronchiseptica RB50 aspartyl/glutamyl-tRNA amidotransferase subunit C NP_891064.2 4827336 D 257310 CDS NP_891065.1 33603505 2658955 4827647..4829185 1 NC_002927.3 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 4829185 gatA 2658955 gatA Bordetella bronchiseptica RB50 aspartyl/glutamyl-tRNA amidotransferase subunit A NP_891065.1 4827647 D 257310 CDS NP_891066.1 33603506 2659343 4829188..4830642 1 NC_002927.3 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 4830642 gatB 2659343 gatB Bordetella bronchiseptica RB50 aspartyl/glutamyl-tRNA amidotransferase subunit B NP_891066.1 4829188 D 257310 CDS NP_891067.1 33603507 2658986 complement(4830726..4831433) 1 NC_002927.3 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 4831433 pyrE 2658986 pyrE Bordetella bronchiseptica RB50 orotate phosphoribosyltransferase NP_891067.1 4830726 R 257310 CDS NP_891068.1 33603508 2659095 4831538..4832326 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0369; endonuclease 4832326 2659095 BB4534 Bordetella bronchiseptica RB50 endonuclease NP_891068.1 4831538 D 257310 CDS NP_891069.1 33603509 2661979 4832699..4834093 1 NC_002927.3 converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; glutamate dehydrogenase 4834093 gdhA 2661979 gdhA Bordetella bronchiseptica RB50 glutamate dehydrogenase NP_891069.1 4832699 D 257310 CDS NP_891070.1 33603510 2659085 complement(4834130..4834702) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0367; hypothetical protein 4834702 2659085 BB4536 Bordetella bronchiseptica RB50 hypothetical protein NP_891070.1 4834130 R 257310 CDS NP_891071.1 33603511 2659222 4834959..4835825 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0366; universal stress protein 4835825 2659222 BB4537 Bordetella bronchiseptica RB50 universal stress protein NP_891071.1 4834959 D 257310 CDS NP_891072.1 33603512 2660425 complement(4835908..4836822) 1 NC_002927.3 LysR family transcriptional regulator 4836822 2660425 BB4538 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_891072.1 4835908 R 257310 CDS NP_891073.1 33603513 2659575 4836919..4838010 1 NC_002927.3 tartrate dehydrogenase 4838010 2659575 BB4539 Bordetella bronchiseptica RB50 tartrate dehydrogenase NP_891073.1 4836919 D 257310 CDS NP_891074.1 33603514 2660597 complement(4838053..4839444) 1 NC_002927.3 hypothetical protein 4839444 2660597 BB4540 Bordetella bronchiseptica RB50 hypothetical protein NP_891074.1 4838053 R 257310 CDS NP_891075.1 33603515 2660598 complement(4839517..4839963) 1 NC_002927.3 hypothetical protein 4839963 2660598 BB4541 Bordetella bronchiseptica RB50 hypothetical protein NP_891075.1 4839517 R 257310 CDS NP_891076.1 33603516 2661128 4840139..4840810 1 NC_002927.3 response regulatory protein 4840810 2661128 BB4542 Bordetella bronchiseptica RB50 response regulatory protein NP_891076.1 4840139 D 257310 CDS NP_891077.1 33603517 2661108 4840807..4842222 1 NC_002927.3 sensor kinase 4842222 2661108 BB4543 Bordetella bronchiseptica RB50 sensor kinase NP_891077.1 4840807 D 257310 CDS NP_891078.1 33603518 2661106 complement(4842187..4843143) 1 NC_002927.3 LysR family transcriptional regulator 4843143 2661106 BB4544 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_891078.1 4842187 R 257310 CDS NP_891079.1 33603519 2660394 4843283..4844308 1 NC_002927.3 catalyzes the formation of pyruvate from D-cysteine; D-cysteine desulfhydrase 4844308 2660394 BB4545 Bordetella bronchiseptica RB50 D-cysteine desulfhydrase NP_891079.1 4843283 D 257310 CDS NP_891080.1 33603520 2659850 4844402..4845301 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0057; amino-acid ABC transporter binding protein precursor 4845301 2659850 BB4546 Bordetella bronchiseptica RB50 amino-acid ABC transporter binding protein precursor NP_891080.1 4844402 D 257310 CDS NP_891081.1 33603521 2659851 4845437..4846198 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0056; glutamate/aspartate transport system permease 4846198 gltJ 2659851 gltJ Bordetella bronchiseptica RB50 glutamate/aspartate transport system permease NP_891081.1 4845437 D 257310 CDS NP_891082.1 33603522 2661316 4846195..4846884 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0055; glutamate/aspartate transport system permease 4846884 gltK 2661316 gltK Bordetella bronchiseptica RB50 glutamate/aspartate transport system permease NP_891082.1 4846195 D 257310 CDS NP_891083.1 33603523 2661613 4846909..4847643 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0054; glutamate/aspartate transport ATP-binding protein 4847643 gltL 2661613 gltL Bordetella bronchiseptica RB50 glutamate/aspartate transport ATP-binding protein NP_891083.1 4846909 D 257310 CDS NP_891084.1 33603524 2659031 4847649..4848383 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0053; aspartate/glutamate racemase 4848383 2659031 BB4550 Bordetella bronchiseptica RB50 aspartate/glutamate racemase NP_891084.1 4847649 D 257310 CDS NP_891085.1 33603525 2658978 complement(4848441..4849505) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0051; outer membrane porin protein precursor 4849505 2658978 BB4551 Bordetella bronchiseptica RB50 outer membrane porin protein precursor NP_891085.1 4848441 R 257310 CDS NP_891086.1 33603526 2658979 complement(4849617..4850828) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0050; muropeptide transporter 4850828 ampG 2658979 ampG Bordetella bronchiseptica RB50 muropeptide transporter NP_891086.1 4849617 R 257310 CDS NP_891087.1 33603527 2661685 complement(4850953..4851567) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0048; hypothetical protein 4851567 2661685 BB4553 Bordetella bronchiseptica RB50 hypothetical protein NP_891087.1 4850953 R 257310 CDS NP_891088.1 33603528 2660144 complement(4851564..4852811) 1 NC_002927.3 Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine; homoserine O-acetyltransferase 4852811 metX 2660144 metX Bordetella bronchiseptica RB50 homoserine O-acetyltransferase NP_891088.1 4851564 R 257310 CDS NP_891089.1 33603529 2660145 4852975..4853982 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0046; malate/L-lactate dehydrogenase 4853982 2660145 BB4555 Bordetella bronchiseptica RB50 malate/L-lactate dehydrogenase NP_891089.1 4852975 D 257310 CDS NP_891090.1 33603530 2662093 complement(4853986..4854879) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0045; hypothetical protein 4854879 2662093 BB4556 Bordetella bronchiseptica RB50 hypothetical protein NP_891090.1 4853986 R 257310 CDS NP_891091.1 33603531 2662094 4855007..4855243 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0044; transcriptional regulator 4855243 2662094 BB4557 Bordetella bronchiseptica RB50 transcriptional regulator NP_891091.1 4855007 D 257310 CDS NP_891092.1 33603532 2659295 complement(4855215..4855850) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0043; hypothetical protein 4855850 2659295 BB4558 Bordetella bronchiseptica RB50 hypothetical protein NP_891092.1 4855215 R 257310 CDS NP_891093.1 33603533 2662626 4855876..4856709 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0042; lipase 4856709 2662626 BB4559 Bordetella bronchiseptica RB50 lipase NP_891093.1 4855876 D 257310 CDS NP_891094.1 33603534 2662627 4856743..4858326 1 NC_002927.3 involved in the first step of glutathione biosynthesis; glutamate--cysteine ligase 4858326 gshA 2662627 gshA Bordetella bronchiseptica RB50 glutamate--cysteine ligase NP_891094.1 4856743 D 257310 CDS NP_891095.1 33603535 2662628 4858392..4858910 1 NC_002927.3 outer membrane lipoprotein 4858910 2662628 BB4561 Bordetella bronchiseptica RB50 outer membrane lipoprotein NP_891095.1 4858392 D 257310 CDS NP_891096.1 33603536 2660382 complement(4858907..4859875) 1 NC_002927.3 hypothetical protein 4859875 2660382 BB4562 Bordetella bronchiseptica RB50 hypothetical protein NP_891096.1 4858907 R 257310 CDS NP_891097.1 33603537 2660383 complement(4859905..4860891) 1 NC_002927.3 hypothetical protein 4860891 2660383 BB4563 Bordetella bronchiseptica RB50 hypothetical protein NP_891097.1 4859905 R 257310 CDS NP_891098.1 33603538 2660384 complement(4861026..4861994) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2849; LysR family transcriptional regulator 4861994 2660384 BB4564 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_891098.1 4861026 R 257310 CDS NP_891099.1 33603539 2661072 4862064..4862900 1 NC_002927.3 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 4862900 panB 2661072 panB Bordetella bronchiseptica RB50 3-methyl-2-oxobutanoate hydroxymethyltransferase NP_891099.1 4862064 D 257310 CDS NP_891100.1 33603540 2661073 4863378..4864523 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2851; outer membrane porin protein precursor 4864523 2661073 BB4566 Bordetella bronchiseptica RB50 outer membrane porin protein precursor NP_891100.1 4863378 D 257310 CDS NP_891101.1 33603541 2660986 complement(4864657..4865703) 1 NC_002927.3 LacI family transcriptional regulator 4865703 2660986 BB4567 Bordetella bronchiseptica RB50 LacI family transcriptional regulator NP_891101.1 4864657 R 257310 CDS NP_891102.1 33603542 2661065 4865831..4866703 1 NC_002927.3 branched-chain amino acid transport system permease 4866703 2661065 BB4568 Bordetella bronchiseptica RB50 branched-chain amino acid transport system permease NP_891102.1 4865831 D 257310 CDS NP_891103.1 33603543 2661221 4866732..4867661 1 NC_002927.3 branched-chain amino acid transport system permease 4867661 2661221 BB4569 Bordetella bronchiseptica RB50 branched-chain amino acid transport system permease NP_891103.1 4866732 D 257310 CDS NP_891104.1 33603544 2661179 4867664..4868428 1 NC_002927.3 high-affinity branched-chain amino acid transport ATP-binding protein 4868428 2661179 BB4570 Bordetella bronchiseptica RB50 high-affinity branched-chain amino acid transport ATP-binding protein NP_891104.1 4867664 D 257310 CDS NP_891105.1 33603545 2659441 4868421..4869134 1 NC_002927.3 high-affinity branched-chain amino acid transport ATP-binding protein 4869134 2659441 BB4571 Bordetella bronchiseptica RB50 high-affinity branched-chain amino acid transport ATP-binding protein NP_891105.1 4868421 D 257310 CDS NP_891106.1 33603546 2660887 4869195..4870340 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3322; binding-protein-dependent transport protein 4870340 2660887 BB4572 Bordetella bronchiseptica RB50 binding-protein-dependent transport protein NP_891106.1 4869195 D 257310 CDS NP_891107.1 33603547 2661061 complement(4871780..4872370) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3320; hypothetical protein 4872370 2661061 BB4575 Bordetella bronchiseptica RB50 hypothetical protein NP_891107.1 4871780 R 257310 CDS NP_891108.1 33603548 2661021 4872661..4873455 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3319; IclR family transcriptional regulator 4873455 2661021 BB4576 Bordetella bronchiseptica RB50 IclR family transcriptional regulator NP_891108.1 4872661 D 257310 CDS NP_891109.1 33603549 2661022 4873472..4874632 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3318; hypothetical protein 4874632 2661022 BB4577 Bordetella bronchiseptica RB50 hypothetical protein NP_891109.1 4873472 D 257310 CDS NP_891110.1 33603550 2660786 4874629..4875372 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3317; enoyl-CoA hydratase 4875372 2660786 BB4578 Bordetella bronchiseptica RB50 enoyl-CoA hydratase NP_891110.1 4874629 D 257310 CDS NP_891111.1 33603551 2660787 complement(4875369..4876244) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3316; copper resistance protein 4876244 copB 2660787 copB Bordetella bronchiseptica RB50 copper resistance protein NP_891111.1 4875369 R 257310 CDS NP_891112.1 33603552 2660705 complement(4876291..4878048) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3315; copper resitance protein 4878048 copA 2660705 copA Bordetella bronchiseptica RB50 copper resitance protein NP_891112.1 4876291 R 257310 CDS NP_891113.1 33603553 2660879 complement(4878092..4878586) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3314; blue copper protein 4878586 2660879 BB4581 Bordetella bronchiseptica RB50 blue copper protein NP_891113.1 4878092 R 257310 CDS NP_891114.1 33603554 2659791 4879101..4880081 1 NC_002927.3 cytochrome c 4880081 2659791 BB4582 Bordetella bronchiseptica RB50 cytochrome c NP_891114.1 4879101 D 257310 CDS NP_891115.1 33603555 2659845 complement(4880350..4881864) 1 NC_002927.3 converts 3-hydroxyadipyl-CoA to beta-ketoadipyl-CoA in phenylacetate degradation; 3-hydroxyacyl-CoA dehydrogenase 4881864 paaH 2659845 paaH Bordetella bronchiseptica RB50 3-hydroxyacyl-CoA dehydrogenase NP_891115.1 4880350 R 257310 CDS NP_891116.1 33603556 2660491 complement(4881948..4883177) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3309; hypothetical protein 4883177 2660491 BB4584 Bordetella bronchiseptica RB50 hypothetical protein NP_891116.1 4881948 R 257310 CDS NP_891117.1 33603557 2659564 complement(4883290..4884438) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3308; acyl-CoA dehydrogenase 4884438 2659564 BB4585 Bordetella bronchiseptica RB50 acyl-CoA dehydrogenase NP_891117.1 4883290 R 257310 CDS NP_891118.1 33603558 2661437 complement(4884483..4885145) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3307; TetR family transcriptional regulator 4885145 2661437 BB4586 Bordetella bronchiseptica RB50 TetR family transcriptional regulator NP_891118.1 4884483 R 257310 CDS NP_891119.1 33603559 2661438 4885259..4886251 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3306; hypothetical protein 4886251 2661438 BB4587 Bordetella bronchiseptica RB50 hypothetical protein NP_891119.1 4885259 D 257310 CDS NP_891120.1 33603560 2659859 4886248..4886985 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3305; enoyl-CoA hydratase 4886985 2659859 BB4588 Bordetella bronchiseptica RB50 enoyl-CoA hydratase NP_891120.1 4886248 D 257310 CDS NP_891121.1 33603561 2659860 complement(4887065..4887886) 1 NC_002927.3 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 4887886 2659860 BB4589 Bordetella bronchiseptica RB50 enoyl-CoA hydratase NP_891121.1 4887065 R 257310 CDS NP_891122.1 33603562 2660404 4887975..4888835 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3303; hypothetical protein 4888835 2660404 BB4590 Bordetella bronchiseptica RB50 hypothetical protein NP_891122.1 4887975 D 257310 CDS NP_891123.1 33603563 2661987 4888963..4889199 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3302; hypothetical protein 4889199 2661987 BB4591 Bordetella bronchiseptica RB50 hypothetical protein NP_891123.1 4888963 D 257310 CDS NP_891124.1 33603564 2661988 4889496..4891124 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3301; binding-protein-dependent transport protein 4891124 2661988 BB4592 Bordetella bronchiseptica RB50 binding-protein-dependent transport protein NP_891124.1 4889496 D 257310 CDS NP_891125.1 33603565 2659530 4891173..4892216 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3300; hypothetical protein 4892216 2659530 BB4593 Bordetella bronchiseptica RB50 hypothetical protein NP_891125.1 4891173 D 257310 CDS NP_891126.1 33603566 2659531 4892275..4893252 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3299; binding-protein-dependent transport permease 4893252 2659531 BB4594 Bordetella bronchiseptica RB50 binding-protein-dependent transport permease NP_891126.1 4892275 D 257310 CDS NP_891127.1 33603567 2662238 4893260..4894180 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3298; binding-protein-dependent transport permease 4894180 2662238 BB4595 Bordetella bronchiseptica RB50 binding-protein-dependent transport permease NP_891127.1 4893260 D 257310 CDS NP_891128.1 33603568 2659402 4894177..4895160 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3297; oligopeptide transport ATP-binding protein 4895160 2659402 BB4596 Bordetella bronchiseptica RB50 oligopeptide transport ATP-binding protein NP_891128.1 4894177 D 257310 CDS NP_891129.1 33603569 2661294 4895157..4896167 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3297; oligopeptide transport ATP-binding protein 4896167 2661294 BB4597 Bordetella bronchiseptica RB50 oligopeptide transport ATP-binding protein NP_891129.1 4895157 D 257310 CDS NP_891130.1 33603570 2660081 4896170..4897075 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3296; hypothetical protein 4897075 2660081 BB4598 Bordetella bronchiseptica RB50 hypothetical protein NP_891130.1 4896170 D 257310 CDS NP_891131.1 33603571 2660082 4897119..4898252 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3295; peptidase 4898252 2660082 BB4599 Bordetella bronchiseptica RB50 peptidase NP_891131.1 4897119 D 257310 CDS NP_891132.1 33603572 2661149 complement(4898383..4900452) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3293; ATP-dependent DNA helicase 4900452 rep 2661149 rep Bordetella bronchiseptica RB50 ATP-dependent DNA helicase NP_891132.1 4898383 R 257310 CDS NP_891133.1 33603573 2661995 complement(4900495..4902597) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3292; primosomal protein 4902597 2661995 BB4601 Bordetella bronchiseptica RB50 primosomal protein NP_891133.1 4900495 R 257310 CDS NP_891134.1 33603574 2662137 complement(4902904..4903980) 1 NC_002927.3 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 4903980 hemE 2662137 hemE Bordetella bronchiseptica RB50 uroporphyrinogen decarboxylase NP_891134.1 4902904 R 257310 CDS NP_891135.1 33603575 2661955 complement(4904056..4904937) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3290; hypothetical protein 4904937 2661955 BB4603 Bordetella bronchiseptica RB50 hypothetical protein NP_891135.1 4904056 R 257310 CDS NP_891136.1 33603576 2661956 complement(4905120..4905542) 1 NC_002927.3 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon 4905542 atpC 2661956 atpC Bordetella bronchiseptica RB50 F0F1 ATP synthase subunit epsilon NP_891136.1 4905120 R 257310 CDS NP_891137.1 33603577 2662595 complement(4905552..4906952) 1 NC_002927.3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 4906952 atpD 2662595 atpD Bordetella bronchiseptica RB50 F0F1 ATP synthase subunit beta NP_891137.1 4905552 R 257310 CDS NP_891138.1 33603578 2660928 complement(4906995..4907900) 1 NC_002927.3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 4907900 atpG 2660928 atpG Bordetella bronchiseptica RB50 F0F1 ATP synthase subunit gamma NP_891138.1 4906995 R 257310 CDS NP_891139.1 33603579 2659829 complement(4907999..4909540) 1 NC_002927.3 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 4909540 atpA 2659829 atpA Bordetella bronchiseptica RB50 F0F1 ATP synthase subunit alpha NP_891139.1 4907999 R 257310 CDS NP_891140.1 33603580 2659905 complement(4909575..4910114) 1 NC_002927.3 Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta 4910114 atpH 2659905 atpH Bordetella bronchiseptica RB50 F0F1 ATP synthase subunit delta NP_891140.1 4909575 R 257310 CDS NP_891141.1 33603581 2659975 complement(4910127..4910597) 1 NC_002927.3 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B 4910597 atpF 2659975 atpF Bordetella bronchiseptica RB50 F0F1 ATP synthase subunit B NP_891141.1 4910127 R 257310 CDS NP_891142.1 33603582 2661518 complement(4910735..4910977) 1 NC_002927.3 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 4910977 atpE 2661518 atpE Bordetella bronchiseptica RB50 F0F1 ATP synthase subunit C NP_891142.1 4910735 R 257310 CDS NP_891143.1 33603583 2659415 complement(4911094..4911975) 1 NC_002927.3 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 4911975 atpB 2659415 atpB Bordetella bronchiseptica RB50 F0F1 ATP synthase subunit A NP_891143.1 4911094 R 257310 CDS NP_891144.1 33603584 2659409 complement(4912048..4912368) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3281; inner membrane ATP synthase 4912368 2659409 BB4612 Bordetella bronchiseptica RB50 inner membrane ATP synthase NP_891144.1 4912048 R 257310 CDS NP_891145.1 33603585 2660455 complement(4912640..4914148) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3280; hypothetical protein 4914148 2660455 BB4613 Bordetella bronchiseptica RB50 hypothetical protein NP_891145.1 4912640 R 257310 CDS NP_891146.1 33603586 2660456 complement(4914445..4915221) 1 NC_002927.3 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 4915221 2660456 BB4614 Bordetella bronchiseptica RB50 enoyl-CoA hydratase NP_891146.1 4914445 R 257310 CDS NP_891147.1 33603587 2660315 4915256..4917028 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3276; hypothetical protein 4917028 2660315 BB4615 Bordetella bronchiseptica RB50 hypothetical protein NP_891147.1 4915256 D 257310 CDS NP_891148.1 33603588 2661271 complement(4917030..4917932) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3275; oxidoreductase 4917932 2661271 BB4616 Bordetella bronchiseptica RB50 oxidoreductase NP_891148.1 4917030 R 257310 CDS NP_891149.1 33603589 2661150 4918057..4918416 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3274; dihydroneopterin aldolase 4918416 folB 2661150 folB Bordetella bronchiseptica RB50 dihydroneopterin aldolase NP_891149.1 4918057 D 257310 CDS NP_891150.1 33603590 2661151 4918448..4919410 1 NC_002927.3 TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs; C32 tRNA thiolase 4919410 2661151 BB4618 Bordetella bronchiseptica RB50 C32 tRNA thiolase NP_891150.1 4918448 D 257310 CDS NP_891151.1 33603591 2662178 complement(4919423..4920391) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3271; 2-hydroxyacid dehydrogenase 4920391 2662178 BB4619 Bordetella bronchiseptica RB50 2-hydroxyacid dehydrogenase NP_891151.1 4919423 R 257310 CDS NP_891152.1 33603592 2659018 complement(4920419..4921258) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3270; thiol:disulfide interchange protein 4921258 dsbC 2659018 dsbC Bordetella bronchiseptica RB50 thiol:disulfide interchange protein NP_891152.1 4920419 R 257310 CDS NP_891153.1 33603593 2662139 complement(4921255..4922424) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3269; ubiquinone biosynthesis hydroxylase family protein 4922424 2662139 BB4621 Bordetella bronchiseptica RB50 ubiquinone biosynthesis hydroxylase family protein NP_891153.1 4921255 R 257310 CDS NP_891154.1 33603594 2662120 complement(4922421..4923710) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3268; membrane-bound transglycosylase 4923710 2662120 BB4622 Bordetella bronchiseptica RB50 membrane-bound transglycosylase NP_891154.1 4922421 R 257310 CDS NP_891155.1 33603595 2661147 complement(4923753..4924127) 1 NC_002927.3 protein associated with Co2+ and Mg2+ efflux; ApaG protein 4924127 apaG 2661147 apaG Bordetella bronchiseptica RB50 ApaG protein NP_891155.1 4923753 R 257310 CDS NP_891156.1 33603596 2661148 4924233..4924970 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3266; ribulose-phosphate 3-epimerase 4924970 rpe 2661148 rpe Bordetella bronchiseptica RB50 ribulose-phosphate 3-epimerase NP_891156.1 4924233 D 257310 CDS NP_891157.1 33603597 2659430 4924978..4925682 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3265; phosphoglycolate phosphatase 4925682 gph 2659430 gph Bordetella bronchiseptica RB50 phosphoglycolate phosphatase NP_891157.1 4924978 D 257310 CDS NP_891158.1 33603598 2660469 4925946..4927466 1 NC_002927.3 with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase I 4927466 trpE 2660469 trpE Bordetella bronchiseptica RB50 anthranilate synthase I NP_891158.1 4925946 D 257310 CDS NP_891159.1 33603599 2660470 4927523..4928086 1 NC_002927.3 TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; anthranilate synthase II 4928086 trpG 2660470 trpG Bordetella bronchiseptica RB50 anthranilate synthase II NP_891159.1 4927523 D 257310 CDS NP_891160.1 33603600 2660440 4928105..4929136 1 NC_002927.3 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 4929136 trpD 2660440 trpD Bordetella bronchiseptica RB50 anthranilate phosphoribosyltransferase NP_891160.1 4928105 D 257310 CDS NP_891161.1 33603601 2660481 4929133..4929921 1 NC_002927.3 involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; indole-3-glycerol-phosphate synthase 4929921 trpC 2660481 trpC Bordetella bronchiseptica RB50 indole-3-glycerol-phosphate synthase NP_891161.1 4929133 D 257310 CDS NP_891162.1 33603602 2660570 complement(4930097..4930861) 1 NC_002927.3 short chain dehydrogenase 4930861 2660570 BB4630 Bordetella bronchiseptica RB50 short chain dehydrogenase NP_891162.1 4930097 R 257310 CDS NP_891163.1 33603603 2661026 complement(4930898..4931527) 1 NC_002927.3 2-hydroxychromene-2-carboxylate isomerase 4931527 2661026 BB4631 Bordetella bronchiseptica RB50 2-hydroxychromene-2-carboxylate isomerase NP_891163.1 4930898 R 257310 CDS NP_891164.1 33603604 2661027 complement(4931524..4931790) 1 NC_002927.3 hypothetical protein 4931790 2661027 BB4632 Bordetella bronchiseptica RB50 hypothetical protein NP_891164.1 4931524 R 257310 CDS NP_891165.1 33603605 2661028 4931920..4932849 1 NC_002927.3 LysR family transcriptional regulator 4932849 2661028 BB4633 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_891165.1 4931920 D 257310 CDS NP_891166.1 33603606 2663256 4932890..4933876 1 NC_002927.3 metallo-beta-lactamase superfamily protein 4933876 2663256 BB4634 Bordetella bronchiseptica RB50 metallo-beta-lactamase superfamily protein NP_891166.1 4932890 D 257310 CDS NP_891167.1 33603607 2662632 4934026..4935444 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3258; hypothetical protein 4935444 2662632 BB4635 Bordetella bronchiseptica RB50 hypothetical protein NP_891167.1 4934026 D 257310 CDS NP_891168.1 33603608 2662633 4935512..4936027 1 NC_002927.3 acyl-CoA thioester hydrolase 4936027 2662633 BB4636 Bordetella bronchiseptica RB50 acyl-CoA thioester hydrolase NP_891168.1 4935512 D 257310 CDS NP_891169.1 33603609 2661031 complement(4936034..4937029) 1 NC_002927.3 hypothetical protein 4937029 2661031 BB4637 Bordetella bronchiseptica RB50 hypothetical protein NP_891169.1 4936034 R 257310 CDS NP_891170.1 33603610 2660980 complement(4937032..4937808) 1 NC_002927.3 polysaccharide deacetylase 4937808 2660980 BB4638 Bordetella bronchiseptica RB50 polysaccharide deacetylase NP_891170.1 4937032 R 257310 CDS NP_891171.1 33603611 2660981 complement(4937822..4938811) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0364; hypothetical protein 4938811 2660981 BB4639 Bordetella bronchiseptica RB50 hypothetical protein NP_891171.1 4937822 R 257310 CDS NP_891172.1 33603612 2660366 complement(4939003..4939743) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0363; amino acid ABC transporter substrate-binding protein 4939743 2660366 BB4640 Bordetella bronchiseptica RB50 amino acid ABC transporter substrate-binding protein NP_891172.1 4939003 R 257310 CDS NP_891173.1 33603613 2660367 complement(4939960..4940970) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0362; CDP-6-deoxy-delta-3,4-glucoseen reductase 4940970 2660367 BB4641 Bordetella bronchiseptica RB50 CDP-6-deoxy-delta-3,4-glucoseen reductase NP_891173.1 4939960 R 257310 CDS NP_891174.1 33603614 2659037 complement(4940989..4941468) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0361; hypothetical protein 4941468 2659037 BB4642 Bordetella bronchiseptica RB50 hypothetical protein NP_891174.1 4940989 R 257310 CDS NP_891175.1 33603615 2659038 complement(4941493..4942953) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0360; aldehyde dehydrogenase 4942953 2659038 BB4643 Bordetella bronchiseptica RB50 aldehyde dehydrogenase NP_891175.1 4941493 R 257310 CDS NP_891176.1 33603616 2661932 complement(4942998..4943729) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0359; hypothetical protein 4943729 2661932 BB4644 Bordetella bronchiseptica RB50 hypothetical protein NP_891176.1 4942998 R 257310 CDS NP_891177.1 33603617 2662009 complement(4943849..4945357) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0358; hypothetical protein 4945357 2662009 BB4645 Bordetella bronchiseptica RB50 hypothetical protein NP_891177.1 4943849 R 257310 CDS NP_891178.1 33603618 2659073 4945587..4946330 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0357; hypothetical protein 4946330 2659073 BB4646 Bordetella bronchiseptica RB50 hypothetical protein NP_891178.1 4945587 D 257310 CDS NP_891179.1 33603619 2661263 4946429..4947151 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0356; GntR family transcriptional regulator 4947151 2661263 BB4647 Bordetella bronchiseptica RB50 GntR family transcriptional regulator NP_891179.1 4946429 D 257310 CDS NP_891180.1 33603620 2661264 complement(4947160..4948092) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0354; ornithine cyclodeaminase 4948092 2661264 BB4648 Bordetella bronchiseptica RB50 ornithine cyclodeaminase NP_891180.1 4947160 R 257310 CDS NP_891181.1 33603621 2659339 complement(4948103..4948408) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0353; ferredoxin 4948408 2659339 BB4649 Bordetella bronchiseptica RB50 ferredoxin NP_891181.1 4948103 R 257310 CDS NP_891182.1 33603622 2662162 complement(4948427..4948726) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0352; hypothetical protein 4948726 2662162 BB4650 Bordetella bronchiseptica RB50 hypothetical protein NP_891182.1 4948427 R 257310 CDS NP_891183.1 33603623 2662163 complement(4948728..4949045) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0351; ferredoxin 4949045 2662163 BB4651 Bordetella bronchiseptica RB50 ferredoxin NP_891183.1 4948728 R 257310 CDS NP_891184.1 33603624 2659191 4949359..4949550 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0350; hypothetical protein 4949550 2659191 BB4652 Bordetella bronchiseptica RB50 hypothetical protein NP_891184.1 4949359 D 257310 CDS NP_891185.1 33603625 2659192 4949724..4950233 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0349; heme uptake regulator 4950233 hurI 2659192 hurI Bordetella bronchiseptica RB50 heme uptake regulator NP_891185.1 4949724 D 257310 CDS NP_891186.1 33603626 2659847 4950269..4951186 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0348; heme uptake transmembrane sensor 4951186 hurR 2659847 hurR Bordetella bronchiseptica RB50 heme uptake transmembrane sensor NP_891186.1 4950269 D 257310 CDS NP_891187.1 33603627 2659848 4951319..4953931 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0347; outer membrane heme receptor 4953931 bhuR 2659848 bhuR Bordetella bronchiseptica RB50 outer membrane heme receptor NP_891187.1 4951319 D 257310 CDS NP_891188.1 33603628 2659856 4953989..4955035 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0346; hemin transport protein 4955035 bhuS 2659856 bhuS Bordetella bronchiseptica RB50 hemin transport protein NP_891188.1 4953989 D 257310 CDS NP_891189.1 33603629 2659857 4955032..4955895 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0345; hemin binding protein 4955895 bhuT 2659857 bhuT Bordetella bronchiseptica RB50 hemin binding protein NP_891189.1 4955032 D 257310 CDS NP_891190.1 33603630 2659858 4955939..4956883 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0344; hemin permease 4956883 bhuU 2659858 bhuU Bordetella bronchiseptica RB50 hemin permease NP_891190.1 4955939 D 257310 CDS NP_891191.1 33603631 2659915 4956898..4957686 1 NC_002927.3 with HmuTU is involved in the transport of hemin; hemin importer ATP-binding protein 4957686 hmuV 2659915 hmuV Bordetella bronchiseptica RB50 hemin importer ATP-binding protein NP_891191.1 4956898 D 257310 CDS NP_891192.1 33603632 2659934 complement(4957690..4958190) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0342; hypothetical protein 4958190 2659934 BB4660 Bordetella bronchiseptica RB50 hypothetical protein NP_891192.1 4957690 R 257310 CDS NP_891193.1 33603633 2659935 4958335..4959057 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0341; hypothetical protein 4959057 2659935 BB4661 Bordetella bronchiseptica RB50 hypothetical protein NP_891193.1 4958335 D 257310 CDS NP_891194.1 33603634 2659936 4959069..4959719 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0340; alkylated DNA repair protein 4959719 alkB 2659936 alkB Bordetella bronchiseptica RB50 alkylated DNA repair protein NP_891194.1 4959069 D 257310 CDS NP_891195.1 33603635 2661358 4959740..4960327 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0339; methylated-DNA--protein-cysteine methyltransferase 4960327 ogt 2661358 ogt Bordetella bronchiseptica RB50 methylated-DNA--protein-cysteine methyltransferase NP_891195.1 4959740 D 257310 CDS NP_891196.1 33603636 2661359 4960422..4961564 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0338; hypothetical protein 4961564 2661359 BB4664 Bordetella bronchiseptica RB50 hypothetical protein NP_891196.1 4960422 D 257310 CDS NP_891197.1 33603637 2659481 complement(4961574..4962404) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0337; hypothetical protein 4962404 2659481 BB4665 Bordetella bronchiseptica RB50 hypothetical protein NP_891197.1 4961574 R 257310 CDS NP_891198.1 33603638 2659482 complement(4962401..4963714) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0336; hypothetical protein 4963714 2659482 BB4666 Bordetella bronchiseptica RB50 hypothetical protein NP_891198.1 4962401 R 257310 CDS NP_891199.1 33603639 2659539 complement(4963825..4964781) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0335; LysR family transcriptional regulator 4964781 2659539 BB4667 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_891199.1 4963825 R 257310 CDS NP_891200.1 33603640 2659495 4964886..4965881 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0334; hypothetical protein 4965881 2659495 BB4668 Bordetella bronchiseptica RB50 hypothetical protein NP_891200.1 4964886 D 257310 CDS NP_891201.1 33603641 2659496 4965894..4966778 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0333; metallo-beta-lactamase family protein 4966778 2659496 BB4669 Bordetella bronchiseptica RB50 metallo-beta-lactamase family protein NP_891201.1 4965894 D 257310 CDS NP_891202.1 33603642 2659596 complement(4966822..4967898) 1 NC_002927.3 hypothetical protein 4967898 2659596 BB4670 Bordetella bronchiseptica RB50 hypothetical protein NP_891202.1 4966822 R 257310 CDS NP_891203.1 33603643 2659597 complement(4967907..4969103) 1 NC_002927.3 serine--glyoxylate aminotransferase 4969103 2659597 BB4671 Bordetella bronchiseptica RB50 serine--glyoxylate aminotransferase NP_891203.1 4967907 R 257310 CDS NP_891204.1 33603644 2660684 4969302..4970012 1 NC_002927.3 GntR family transcriptional regulator 4970012 2660684 BB4672 Bordetella bronchiseptica RB50 GntR family transcriptional regulator NP_891204.1 4969302 D 257310 CDS NP_891205.1 33603645 2660685 complement(4970045..4970590) 1 NC_002927.3 hypothetical protein 4970590 2660685 BB4673 Bordetella bronchiseptica RB50 hypothetical protein NP_891205.1 4970045 R 257310 CDS NP_891206.1 33603646 2660445 complement(4970618..4972213) 1 NC_002927.3 cytochrome c oxidase polypeptide I 4972213 ctaD 2660445 ctaD Bordetella bronchiseptica RB50 cytochrome c oxidase polypeptide I NP_891206.1 4970618 R 257310 CDS NP_891207.1 33603647 2660837 4972578..4973546 1 NC_002927.3 lipoprotein 4973546 2660837 BB4675 Bordetella bronchiseptica RB50 lipoprotein NP_891207.1 4972578 D 257310 CDS NP_891208.1 33603648 2660838 complement(4973562..4974506) 1 NC_002927.3 LysR family transcriptional regulator 4974506 2660838 BB4676 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_891208.1 4973562 R 257310 CDS NP_891209.1 33603649 2660911 4974735..4975442 1 NC_002927.3 haloacid dehalogenase-like hydrolase 4975442 2660911 BB4677 Bordetella bronchiseptica RB50 haloacid dehalogenase-like hydrolase NP_891209.1 4974735 D 257310 CDS NP_891210.1 33603650 2660912 4975445..4976653 1 NC_002927.3 CaiB/BaiF family protein 4976653 2660912 BB4678 Bordetella bronchiseptica RB50 CaiB/BaiF family protein NP_891210.1 4975445 D 257310 CDS NP_891211.1 33603651 2661136 4976666..4977121 1 NC_002927.3 hypothetical protein 4977121 2661136 BB4679 Bordetella bronchiseptica RB50 hypothetical protein NP_891211.1 4976666 D 257310 CDS NP_891212.1 33603652 2661137 complement(4977132..4978106) 1 NC_002927.3 hypothetical protein 4978106 2661137 BB4680 Bordetella bronchiseptica RB50 hypothetical protein NP_891212.1 4977132 R 257310 CDS NP_891213.1 33603653 2661099 complement(4978146..4979894) 1 NC_002927.3 hypothetical protein 4979894 2661099 BB4681 Bordetella bronchiseptica RB50 hypothetical protein NP_891213.1 4978146 R 257310 CDS NP_891214.1 33603654 2661100 complement(4979902..4980957) 1 NC_002927.3 hypothetical protein 4980957 2661100 BB4682 Bordetella bronchiseptica RB50 hypothetical protein NP_891214.1 4979902 R 257310 CDS NP_891215.1 33603655 2661101 4981069..4982064 1 NC_002927.3 LysR family transcriptional regulator 4982064 2661101 BB4683 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_891215.1 4981069 D 257310 CDS NP_891216.1 33603656 2660368 complement(4982155..4983225) 1 NC_002927.3 Similar to Alcaligenes eutrophus L-lactate dehydrogenase ldH SWALL:LDH_ALCEU (SWALL:Q07251) (349 aa) fasta scores: E(): 5.2e-24, 33.05% id in 354 aa, and to Rhizobium loti probable malate dehydrogenase mlr9216 SWALL:Q981V8 (EMBL:AP003015) (366 aa) fasta scores: E(): 3.6e-22, 29.78% id in 329 aa; malate/L-lactate dehydrogenase 4983225 2660368 BB4684 Bordetella bronchiseptica RB50 malate/L-lactate dehydrogenase NP_891216.1 4982155 R 257310 CDS NP_891217.1 33603657 2661649 4983286..4984026 1 NC_002927.3 Similar to Deinococcus radiodurans transcriptional regulator, gntr family dr1905 SWALL:Q9RT60 (EMBL:AE002029) (245 aa) fasta scores: E(): 7.1e-16, 30.63% id in 222 aa, and to Ralstonia solanacearum probable transcriptional regulatory DNA-binding transcription regulator protein rsc1078 or rs04109 SWALL:Q8Y0G6 (EMBL:AL646062) (255 aa) fasta scores: E(): 1.5e-13, 32.9% id in 234 aa; GntR family transcriptional regulator 4984026 2661649 BB4685 Bordetella bronchiseptica RB50 GntR family transcriptional regulator NP_891217.1 4983286 D 257310 CDS NP_891218.1 33603658 2661650 4984135..4984920 1 NC_002927.3 Similar to Agrobacterium tumefaciens NAD/NADP dependent oxidoreductase atu0990 or agr_c_1817 SWALL:Q8UGP5 (EMBL:AE009064) (293 aa) fasta scores: E(): 1e-36, 47.17% id in 265 aa, and to Rhizobium meliloti oxidoreductase r00362 or smc01157 SWALL:Q92SK9 (EMBL:AL591783) (259 aa) fasta scores: E(): 1.7e-35, 47.14% id in 263 aa; short chain dehydrogenase 4984920 2661650 BB4686 Bordetella bronchiseptica RB50 short chain dehydrogenase NP_891218.1 4984135 D 257310 CDS NP_891219.1 33603659 2662170 4984967..4986130 1 NC_002927.3 Similar to Sulfolobus solfataricus mandelate racemase /muconate lactonizing enzyme related protein sso3124 SWALL:Q97U96 (EMBL:AE006902) (373 aa) fasta scores: E(): 1.1e-32, 35.71% id in 336 aa, and to Pseudomonas aeruginosa hypothetical protein Pa2215 pa2215 SWALL:Q9I1Q2 (EMBL:AE004648) (391 aa) fasta scores: E(): 4.7e-31, 33.72% id in 344 aa; mandelate racemase 4986130 2662170 BB4687 Bordetella bronchiseptica RB50 mandelate racemase NP_891219.1 4984967 D 257310 CDS NP_891220.1 33603660 2660351 4986127..4986495 1 NC_002927.3 Similar to Streptomyces coelicolor sc8d9.09 protein sco5497 or sc8d9.09 SWALL:Q9Z582 (EMBL:AL035569) (164 aa) fasta scores: E(): 0.00041, 36.7% id in 79 aa, and to Pyrobaculum aerophilum hypothetical protein Pae2796 pae2796 SWALL:Q8ZUG4 (EMBL:AE009894) (110 aa) fasta scores: E(): 0.01, 32.46% id in 77 aa; hypothetical protein 4986495 2660351 BB4688 Bordetella bronchiseptica RB50 hypothetical protein NP_891220.1 4986127 D 257310 CDS NP_891221.1 33603661 2660352 4986561..4987538 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0612; Similar to Rhizobium meliloti hypothetical protein ra1058 ra1058 or sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 3.5e-36, 36.08% id in 327 aa, and to Comamonas testosteroni OrfJ protein orfJ SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 1.5e-34, 35.36% id in 328 aa; hypothetical protein 4987538 2660352 BB4689 Bordetella bronchiseptica RB50 hypothetical protein NP_891221.1 4986561 D 257310 CDS NP_891222.1 33603662 2658997 complement(4987642..4988448) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0613; Similar to Ralstonia solanacearum probable transcription regulator protein rsc0300 or rs03267 SWALL:Q8Y2N5 (EMBL:AL646058) (290 aa) fasta scores: E(): 1.3e-34, 42.63% id in 258 aa, and to Ralstonia solanacearum probable transcription regulator protein rsp0704 or rs01745 SWALL:Q8XRX7 (EMBL:AL646080) (311 aa) fasta scores: E(): 1.2e-28, 38.11% id in 265 aa; transcriptional regulator 4988448 2658997 BB4690 Bordetella bronchiseptica RB50 transcriptional regulator NP_891222.1 4987642 R 257310 CDS NP_891223.1 33603663 2658998 4988578..4990335 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0614; Similar to Pseudomonas aeruginosa hypothetical protein Pa2243 pa2243 SWALL:Q9I1M6 (EMBL:AE004650) (577 aa) fasta scores: E(): 4.1e-91, 47.71% id in 570 aa, and to Corynebacterium glutamicum succinate dehydrogenase/fumarate reductase, flavoprotein subunits cgl2633 SWALL:BAC00027 (EMBL:AP005282) (563 aa) fasta scores: E(): 5.1e-77, 40.9% id in 555 aa; hypothetical protein 4990335 2658998 BB4691 Bordetella bronchiseptica RB50 hypothetical protein NP_891223.1 4988578 D 257310 CDS NP_891224.1 33603664 2661960 4990411..4991370 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0615; Similar to Xanthomonas axonopodis hypothetical protein Xac2278 xac2278 SWALL:AAM37131 (EMBL:AE011865) (315 aa) fasta scores: E(): 9.8e-35, 36.84% id in 323 aa, and to Comamonas testosteroni Orf4 protein orf4 SWALL:Q9S155 (EMBL:AB024335) (325 aa) fasta scores: E(): 4.2e-32, 38.78% id in 312 aa; hypothetical protein 4991370 2661960 BB4692 Bordetella bronchiseptica RB50 hypothetical protein NP_891224.1 4990411 D 257310 CDS NP_891225.1 33603665 2661961 4991424..4992269 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0616; Similar to Mycobacterium tuberculosis hypothetical protein rv3510c rv3510c or mtv023.17 or mt3614 SWALL:O53555 (EMBL:AL022022) (278 aa) fasta scores: E(): 7.6e-15, 27.69% id in 278 aa, and to Mycobacterium tuberculosis hypothetical protein rv2303c rv2303c or mtcy339.06 or mt2360 SWALL:Q50662 (EMBL:Z77163) (307 aa) fasta scores: E(): 1.1e-13, 27.14% id in 291 aa; hypothetical protein 4992269 2661961 BB4693 Bordetella bronchiseptica RB50 hypothetical protein NP_891225.1 4991424 D 257310 CDS NP_891226.1 33603666 2659674 complement(4992321..4992974) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0617; Similar to Caulobacter crescentus transcriptional regulator, tetr family cc0992 SWALL:Q9A9I8 (EMBL:AE005777) (210 aa) fasta scores: E(): 2e-13, 34.07% id in 179 aa, and to Rhodococcus sp. NCIMB 9784 transcriptional repressor campR SWALL:Q93TU7 (EMBL:AF323755) (206 aa) fasta scores: E(): 3.3e-11, 25% id in 184 aa; TetR family transcriptional regulator 4992974 2659674 BB4694 Bordetella bronchiseptica RB50 TetR family transcriptional regulator NP_891226.1 4992321 R 257310 CDS NP_891227.1 33603667 2659675 complement(4993017..4994426) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0618; Similar to Escherichia coli, and Escherichia coli O157:H7 dihydrolipoamide dehydrogenase lpda or lpd or b0116 or z0126 or ecs0120 SWALL:DLDH_ECOLI (SWALL:P00391) (473 aa) fasta scores: E(): 1.4e-93, 56% id in 466 aa, and to Salmonella typhimurium lipoamide dehydrogenase lpda or stm0154 SWALL:Q8ZRT0 (EMBL:AE008701) (474 aa) fasta scores: E(): 1.9e-93, 55.46% id in 467 aa; dihydrolipoamide dehydrogenase 4994426 lpdA 2659675 lpdA Bordetella bronchiseptica RB50 dihydrolipoamide dehydrogenase NP_891227.1 4993017 R 257310 CDS NP_891228.1 33603668 2660090 complement(4994443..4995183) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0619; Similar to Thermotoga maritima branched chain amino acid ABC transporter ATP-binding protein tm1139 SWALL:Q9X0M3 (EMBL:AE001771) (239 aa) fasta scores: E(): 8.4e-29, 46.61% id in 236 aa, and to Anabaena sp. ATP-binding protein of branched-chain amino acid ABC transporter alr2541 SWALL:Q8YU20 (EMBL:AP003589) (264 aa) fasta scores: E(): 1.2e-28, 44.91% id in 236 aa; branched-chain amino acid ABC transporter ATP-binding protein 4995183 2660090 BB4696 Bordetella bronchiseptica RB50 branched-chain amino acid ABC transporter ATP-binding protein NP_891228.1 4994443 R 257310 CDS NP_891229.1 33603669 2659044 complement(4995176..4996990) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0620; Similar to Deinococcus radiodurans branched-chain amino acid ABC tranpsorter, ATP binding protein dra0261 SWALL:Q9RYP8 (EMBL:AE001863) (587 aa) fasta scores: E(): 1.1e-43, 33.85% id in 576 aa, and to Agrobacterium tumefaciens ABC transporter nucleotide binding/ATPase atu1411 or agr_c_2606 SWALL:Q8UFI6 (EMBL:AE009101) (595 aa) fasta scores: E(): 3e-43, 33.67% id in 579 aa; branched-chain amino acid ABC transporter permease 4996990 2659044 BB4697 Bordetella bronchiseptica RB50 branched-chain amino acid ABC transporter permease NP_891229.1 4995176 R 257310 CDS NP_891230.1 33603670 2660389 complement(4996996..4997880) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0621; Similar to Escherichia coli, and Escherichia coli O157:H7 high-affinity branched-chain amino acid transport system permease livh livh or b3457 or z4827 or ecs4304 SWALL:LIVH_ECOLI (SWALL:P08340) (308 aa) fasta scores: E(): 4.9e-23, 33.55% id in 304 aa, and to Streptococcus pneumoniae R6 ABC transporter membrane-spanning permease-branched chain amino acid transport livH SWALL:AAK99464 (EMBL:AE008443) (292 aa) fasta scores: E(): 1.1e-24, 30.87% id in 298 aa; branched-chain amino acid ABC transporter permease 4997880 2660389 BB4698 Bordetella bronchiseptica RB50 branched-chain amino acid ABC transporter permease NP_891230.1 4996996 R 257310 CDS NP_891231.1 33603671 2663696 complement(4997950..4999158) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0622; Similar to Escherichia coli leu/ile/val-binding protein precursor livj or b3460 SWALL:LIVJ_ECOLI (SWALL:P02917) (367 aa) fasta scores: E(): 9.2e-13, 28.42% id in 299 aa, and to Rhizobium meliloti probable leu/ile/val-binding protein livj or r00923 or smc00078 SWALL:Q92RF4 (EMBL:AL591785) (368 aa) fasta scores: E(): 1.5e-14, 32.86% id in 353 aa; leu/Ile/val-binding protein precursor 4999158 2663696 BB4699 Bordetella bronchiseptica RB50 leu/Ile/val-binding protein precursor NP_891231.1 4997950 R 257310 CDS NP_891232.1 33603672 2663848 complement(4999233..5000630) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0623; Similar to Pseudomonas aeruginosa hypothetical protein Pa0881 pa0881 SWALL:Q9I564 (EMBL:AE004522) (450 aa) fasta scores: E(): 1.2e-16, 26.83% id in 436 aa, and to Methanobacterium thermoautotrophicum conserved protein mth965 SWALL:O27046 (EMBL:AE000870) (452 aa) fasta scores: E(): 9.7e-16, 30.93% id in 375 aa; hypothetical protein 5000630 2663848 BB4700 Bordetella bronchiseptica RB50 hypothetical protein NP_891232.1 4999233 R 257310 CDS NP_891233.1 33603673 2663849 complement(5000651..5002144) 1 NC_002927.3 activates fatty acids by binding to coenzyme A; acyl-CoA synthetase 5002144 2663849 BB4701 Bordetella bronchiseptica RB50 acyl-CoA synthetase NP_891233.1 5000651 R 257310 CDS NP_891234.1 33603674 2663911 complement(5002224..5003399) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0625; Similar to Archaeoglobus fulgidus acyl-coa dehydrogenase af0964 SWALL:O29298 (EMBL:AE001038) (394 aa) fasta scores: E(): 1e-65, 45.31% id in 395 aa, and to Caulobacter crescentus acyl-coa dehydrogenase family protein cc2328 SWALL:Q9A5W9 (EMBL:AE005903) (387 aa) fasta scores: E(): 2.4e-56, 41.64% id in 389 aa; acyl-CoA dehydrogenase 5003399 2663911 BB4702 Bordetella bronchiseptica RB50 acyl-CoA dehydrogenase NP_891234.1 5002224 R 257310 CDS NP_891235.1 33603675 2659372 complement(5003405..5004655) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0626; Similar to Caulobacter crescentus 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase cc0340 SWALL:Q9AB91 (EMBL:AE005707) (402 aa) fasta scores: E(): 1.2e-29, 37.04% id in 413 aa, and to Pseudomonas aeruginosa dihydrolipoamide succinyltransferase SucB or pa1586 SWALL:Q9I3D2 (EMBL:AE004586) (409 aa) fasta scores: E(): 3.9e-29, 37.16% id in 409 aa; 2-oxo acid dehydrogenase acyltransferase 5004655 2659372 BB4703 Bordetella bronchiseptica RB50 2-oxo acid dehydrogenase acyltransferase NP_891235.1 5003405 R 257310 CDS NP_891236.1 33603676 2661322 complement(5004659..5005444) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0627; Similar to Clostridium acetobutylicum 3-hydroxybutyryl-CoA dehydratase Crt or cac2712 SWALL:CRT_CLOAB (SWALL:P52046) (261 aa) fasta scores: E(): 1.8e-32, 39.76% id in 254 aa, and to Thermoanaerobacter tengcongensis enoyl-CoA hydratase/carnithine racemase CaiD or tte0544 SWALL:Q8RC92 (EMBL:AE013024) (260 aa) fasta scores: E(): 3.2e-35, 41.76% id in 261 aa; enoyl-CoA hydratase 5005444 2661322 BB4704 Bordetella bronchiseptica RB50 enoyl-CoA hydratase NP_891236.1 5004659 R 257310 CDS NP_891237.1 33603677 2661323 complement(5005459..5006433) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0628; Similar to Zea mays pyruvate dehydrogenase E1 beta subunit isoform 2 SWALL:Q9ZQY2 (EMBL:AF069909) (374 aa) fasta scores: E(): 1e-55, 46.76% id in 325 aa, and to Rhizobium loti acetoin dehydrogenase mll3628 SWALL:Q98FT4 (EMBL:AP003002) (332 aa) fasta scores: E(): 5.6e-59, 51.4% id in 321 aa; pyruvate dehydrogenase E1 beta subunit 5006433 2661323 BB4704A Bordetella bronchiseptica RB50 pyruvate dehydrogenase E1 beta subunit NP_891237.1 5005459 R 257310 CDS NP_891238.1 33603678 2661526 complement(5006435..5007406) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0629; Similar to Zymomonas mobilis pyruvate dehydrogenase E1 component, alpha subunit PdhA or PdhA alphA SWALL:ODPA_ZYMMO (SWALL:O66112) (354 aa) fasta scores: E(): 3.5e-41, 41.45% id in 316 aa, and to Pseudomonas aeruginosa probable dehydrogenase E1 component pa4150 SWALL:Q9HWN1 (EMBL:AE004831) (324 aa) fasta scores: E(): 6.1e-48, 45% id in 320 aa; pyruvate dehydrogenase E1 component subunit alpha 5007406 pdhA 2661526 pdhA Bordetella bronchiseptica RB50 pyruvate dehydrogenase E1 component subunit alpha NP_891238.1 5006435 R 257310 CDS NP_891239.1 33603679 2661527 complement(5007758..5008543) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0630; Similar to Pseudomonas aeruginosa probable transcriptional regulator pa1015 SWALL:Q9I4V8 (EMBL:AE004534) (266 aa) fasta scores: E(): 7e-31, 39.59% id in 245 aa, and to Pseudomonas abietaniphila DitR ditR SWALL:Q9X4X3 (EMBL:AF119621) (273 aa) fasta scores: E(): 3.8e-26, 35.8% id in 243 aa; transcriptional regulator 5008543 2661527 BB4706 Bordetella bronchiseptica RB50 transcriptional regulator NP_891239.1 5007758 R 257310 CDS NP_891240.1 33603680 2661522 complement(5008620..5009396) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0631; Similar to Rhodobacter capsulatus probable enoyl-CoA hydratase fadb1 SWALL:ECHH_RHOCA (SWALL:P24162) (257 aa) fasta scores: E(): 8.7e-10, 32.01% id in 253 aa, and to Agrobacterium tumefaciens enoyl-CoA hydratase atu3481 or agr_l_2700 SWALL:Q8UA93 (EMBL:AE009278) (280 aa) fasta scores: E(): 3.1e-11, 31.9% id in 210 aa; enoyl-CoA hydratase 5009396 2661522 BB4707 Bordetella bronchiseptica RB50 enoyl-CoA hydratase NP_891240.1 5008620 R 257310 CDS NP_891241.1 33603681 2661523 complement(5009393..5011525) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0632; Similar to Pseudomonas mendocina pimeloyl-CoA synthetase SWALL:Q9ZER2 (EMBL:AJ012480) (711 aa) fasta scores: E(): 2.5e-71, 36.86% id in 708 aa, and to Pseudomonas aeruginosa pimeloyl-CoA synthetase pa1017 SWALL:Q9I4V6 (EMBL:AE004534) (715 aa) fasta scores: E(): 5.8e-70, 35.95% id in 712 aa; pimeloyl-CoA synthetase 5011525 2661523 BB4708 Bordetella bronchiseptica RB50 pimeloyl-CoA synthetase NP_891241.1 5009393 R 257310 CDS NP_891242.1 33603682 2659592 complement(5011527..5012519) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0633; Similar to Comamonas testosteroni OrfJ protein orfJ SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 1.7e-41, 42.94% id in 319 aa, and to Rhizobium meliloti hypothetical protein ra1058 ra1058 or sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 5.9e-41, 40.42% id in 329 aa; hypothetical protein 5012519 2659592 BB4709 Bordetella bronchiseptica RB50 hypothetical protein NP_891242.1 5011527 R 257310 CDS NP_891243.1 33603683 2659593 5012764..5013912 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0634; Similar to Bacillus subtilis acyl-coa dehydrogenase acda or acD SWALL:ACDA_BACSU (SWALL:P45867) (379 aa) fasta scores: E(): 2.5e-49, 41.11% id in 377 aa, and to Bacillus halodurans acyl-coa dehydrogenase acda or bh3798 SWALL:Q9K6D1 (EMBL:AP001520) (380 aa) fasta scores: E(): 2e-52, 41.53% id in 378 aa; acyl-CoA dehydrogenase 5013912 2659593 BB4710 Bordetella bronchiseptica RB50 acyl-CoA dehydrogenase NP_891243.1 5012764 D 257310 CDS NP_891244.1 33603684 2660672 5013909..5014715 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0635; Similar to Escherichia coli probable enoyl-coa hydratase PaaG or b1394 SWALL:PAAG_ECOLI (SWALL:P77467) (262 aa) fasta scores: E(): 6.3e-25, 33.84% id in 260 aa, and to Rhizobium meliloti enoyl-coa hydratase paag or rb1553 or smb21633 SWALL:Q92TG7 (EMBL:AL603647) (263 aa) fasta scores: E(): 2.7e-28, 39.53% id in 258 aa; enoyl-CoA hydratase 5014715 2660672 BB4711 Bordetella bronchiseptica RB50 enoyl-CoA hydratase NP_891244.1 5013909 D 257310 CDS NP_891245.1 33603685 2660913 5014712..5015866 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0636; Similar to Pseudomonas aeruginosa hypothetical protein Pa1016 pa1016 SWALL:Q9I4V7 (EMBL:AE004534) (383 aa) fasta scores: E(): 2.5e-46, 41.68% id in 379 aa, and to Rhodococcus sp. NCIMB 9784 non-specific lipid carrier-like protein campC SWALL:Q93TU4 (EMBL:AF323755) (408 aa) fasta scores: E(): 5.2e-36, 35.1% id in 376 aa; hypothetical protein 5015866 2660913 BB4712 Bordetella bronchiseptica RB50 hypothetical protein NP_891245.1 5014712 D 257310 CDS NP_891246.1 33603686 2660914 5015868..5016269 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0637; Similar to Thermoplasma volcanium hypothetical protein tv0134 tv0134 or tvg0142586 SWALL:Q97CG7 (EMBL:AP000991) (135 aa) fasta scores: E(): 1.4e-07, 36.52% id in 115 aa, and to Thermoplasma acidophilum hypothetical protein Ta1457 ta1457 SWALL:Q9HI85 (EMBL:AL445067) (135 aa) fasta scores: E(): 2.2e-07, 35.65% id in 115 aa; hypothetical protein 5016269 2660914 BB4713 Bordetella bronchiseptica RB50 hypothetical protein NP_891246.1 5015868 D 257310 CDS NP_891247.1 33603687 2660774 5016266..5016661 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0638; no significant database matches; hypothetical protein 5016661 2660774 BB4714 Bordetella bronchiseptica RB50 hypothetical protein NP_891247.1 5016266 D 257310 CDS NP_891248.1 33603688 2660775 5016658..5017050 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0639; Similar to Archaeoglobus fulgidus monoamine oxidase regulatory protein, af0198 SWALL:O30041 (EMBL:AE001092) (146 aa) fasta scores: E(): 1.1e-06, 44.44% id in 90 aa, and to Aeromonas hydrophila enoyl-coa hydrotase phaJ SWALL:Q8RT81 (EMBL:AF468057) (134 aa) fasta scores: E(): 2.9e-06, 32.75% id in 116 aa; hypothetical protein 5017050 2660775 BB4715 Bordetella bronchiseptica RB50 hypothetical protein NP_891248.1 5016658 D 257310 CDS NP_891249.1 33603689 2660673 5017061..5018221 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0640; Similar to Pseudomonas aeruginosa probable acyl-coa dehydrogenase pa2889 SWALL:Q9HZV8 (EMBL:AE004715) (386 aa) fasta scores: E(): 8.7e-87, 55.84% id in 385 aa, and to Caenorhabditis elegans probable isovaleryl-coa dehydrogenase c02d5.1 SWALL:IVD_CAEEL (SWALL:P34275) (408 aa) fasta scores: E(): 1.4e-71, 47.79% id in 385 aa; acyl-CoA dehydrogenase 5018221 2660673 BB4716 Bordetella bronchiseptica RB50 acyl-CoA dehydrogenase NP_891249.1 5017061 D 257310 CDS NP_891250.1 33603690 2660917 5018259..5019236 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0641; Similar to Rhizobium meliloti hypothetical protein ra1058 ra1058 or sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 7.3e-41, 40.18% id in 321 aa, and to Comamonas testosteroni OrfJ protein orfJ SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 2.1e-37, 37.34% id in 324 aa; hypothetical protein 5019236 2660917 BB4717 Bordetella bronchiseptica RB50 hypothetical protein NP_891250.1 5018259 D 257310 CDS NP_891251.1 33603691 2661843 5019244..5020392 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0642; Similar to Pseudomonas aeruginosa hypothetical protein Pa3592 pa3592 SWALL:Q9HY34 (EMBL:AE004779) (395 aa) fasta scores: E(): 2.6e-30, 35.56% id in 388 aa, and to Rhizobium loti hypothetical protein Mlr1614 mlr1614 SWALL:Q98K67 (EMBL:AP002997) (391 aa) fasta scores: E(): 3.8e-30, 34.61% id in 390 aa; hypothetical protein 5020392 2661843 BB4718 Bordetella bronchiseptica RB50 hypothetical protein NP_891251.1 5019244 D 257310 CDS NP_891252.1 33603692 2661844 complement(5020389..5021279) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0643; Similar to Xanthomonas axonopodis transcriptional regulator nocr or xac2276 SWALL:AAM37129 (EMBL:AE011865) (305 aa) fasta scores: E(): 2.9e-30, 36.94% id in 295 aa, and to Escherichia coli O157:H7 positive regulator for lys lysr or z4157 or ecs3696 SWALL:Q8X6J2 (EMBL:AE005512) (311 aa) fasta scores: E(): 4.4e-27, 34.93% id in 292 aa; LysR family transcriptional regulator 5021279 2661844 BB4719 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_891252.1 5020389 R 257310 CDS NP_891253.1 33603693 2661875 5021486..5022433 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0644; Similar to Agrobacterium tumefaciens dihydrodipicolinate synthase dapa or atu5457 or agr_pat_671 SWALL:Q8UJL9 (EMBL:AE008967) (302 aa) fasta scores: E(): 9.2e-20, 32.05% id in 287 aa, and to Thermotoga maritima dihydrodipicolinate synthase dapa or tm1521 SWALL:DAPA_THEMA (SWALL:Q9X1K9) (294 aa) fasta scores: E(): 6.4e-16, 28.8% id in 250 aa; dihydrodipicolinate synthase 5022433 2661875 BB4720 Bordetella bronchiseptica RB50 dihydrodipicolinate synthase NP_891253.1 5021486 D 257310 CDS NP_891254.1 33603694 2661861 complement(5022444..5023127) 1 NC_002927.3 Similar to Streptomyces coelicolor transcriptional regulator sco6565 or sc4b5.15 SWALL:Q9ZBV3 (EMBL:AL034443) (225 aa) fasta scores: E(): 7.1e-12, 33% id in 203 aa, and to Thermoanaerobacter tengcongensis transcriptional regulator gntr or tte2558 SWALL:Q8R766 (EMBL:AE013196) (225 aa) fasta scores: E(): 8.2e-12, 27.8% id in 205 aa; GntR family transcriptional regulator 5023127 2661861 BB4721 Bordetella bronchiseptica RB50 GntR family transcriptional regulator NP_891254.1 5022444 R 257310 CDS NP_891255.1 33603695 2661862 5023342..5024571 1 NC_002927.3 Similar to Rhizobium meliloti aspartate aminotransferase a aata or r02325 or smc01578 SWALL:AATA_RHIME (SWALL:Q02635) (400 aa) fasta scores: E(): 4.6e-75, 51.64% id in 395 aa, and to Agrobacterium tumefaciens aspartate aminotransferase a aata or atu2196 or agr_c_3991 SWALL:Q8UDD1 (EMBL:AE009170) (400 aa) fasta scores: E(): 1.7e-75, 51.64% id in 395 aa; aspartate aminotransferase A 5024571 aatA 2661862 aatA Bordetella bronchiseptica RB50 aspartate aminotransferase A NP_891255.1 5023342 D 257310 CDS NP_891256.1 33603696 2661858 5024568..5025293 1 NC_002927.3 Similar to Bordetella pertussis hypothetical 59.5 kDa protein SWALL:O30443 (EMBL:AF006000) (568 aa) fasta scores: E(): 7.3e-32, 46.22% id in 225 aa, and to Bacillus subtilis hypothetical protein YcsJ ycsJ SWALL:YCSJ_BACSU (SWALL:P42967) (578 aa) fasta scores: E(): 3.5e-27, 38.42% id in 229 aa; hypothetical protein 5025293 2661858 BB4723 Bordetella bronchiseptica RB50 hypothetical protein NP_891256.1 5024568 D 257310 CDS NP_891257.1 33603697 2661859 5025290..5026291 1 NC_002927.3 Similar to Bacillus halodurans hypothetical protein Bh1818 bh1818 SWALL:Q9KBV6 (EMBL:AP001513) (331 aa) fasta scores: E(): 2.3e-44, 44.34% id in 318 aa, and to Ralstonia solanacearum hypothetical protein rsc2170 rsc2170 or rs01429 SWALL:Q8XXE4 (EMBL:AL646068) (353 aa) fasta scores: E(): 1.1e-31, 39.51% id in 329 aa; hypothetical protein 5026291 2661859 BB4724 Bordetella bronchiseptica RB50 hypothetical protein NP_891257.1 5025290 D 257310 CDS NP_891258.1 33603698 2661860 5026330..5027082 1 NC_002927.3 Similar to Bordetella pertussis hypothetical 26.3 kDa protein SWALL:O30444 (EMBL:AF006000) (252 aa) fasta scores: E(): 2.8e-54, 62.09% id in 248 aa, and to Staphylococcus aureus hypothetical protein sav1605 sav1605 or sa1433 SWALL:Q99TP4 (EMBL:AP003362) (250 aa) fasta scores: E(): 2.3e-42, 48.38% id in 248 aa; hypothetical protein 5027082 2661860 BB4725 Bordetella bronchiseptica RB50 hypothetical protein NP_891258.1 5026330 D 257310 CDS NP_891259.1 33603699 2661855 5027147..5028754 1 NC_002927.3 Similar to Rhizobium meliloti probable extracellular substrate-binding protein, family 5 ra1133 or sma2075 SWALL:Q92XV7 (EMBL:AE007299) (543 aa) fasta scores: E(): 3.5e-61, 36.39% id in 544 aa, and to Agrobacterium tumefaciens ABC transporter substrate-binding protein atu3433 or agr_l_2786 SWALL:Q8UAE1 (EMBL:AE009273) (585 aa) fasta scores: E(): 1.5e-65, 36.86% id in 529 aa; peptide ABC transporter substrate-binding protein 5028754 2661855 BB4726 Bordetella bronchiseptica RB50 peptide ABC transporter substrate-binding protein NP_891259.1 5027147 D 257310 CDS NP_891260.1 33603700 2661856 5028819..5029805 1 NC_002927.3 Similar to Rhizobium meliloti probable ABC transporter permease ra1138 or sma2085 SWALL:Q92XV2 (EMBL:AE007299) (328 aa) fasta scores: E(): 2.2e-54, 47.93% id in 315 aa, and to Agrobacterium tumefaciens ABC transporter membrane spanning protein atu3434 or agr_l_2785 SWALL:Q8UAE0 (EMBL:AE009274) (347 aa) fasta scores: E(): 9.4e-54, 47.96% id in 319 aa; inner membrane component of binding-protein-dependent transport system 5029805 2661856 BB4727 Bordetella bronchiseptica RB50 inner membrane component of binding-protein-dependent transport system NP_891260.1 5028819 D 257310 CDS NP_891261.1 33603701 2661853 5029809..5030648 1 NC_002927.3 Similar to Rhizobium loti ABC transporter permease mlr3399 SWALL:Q98GB9 (EMBL:AP003001) (276 aa) fasta scores: E(): 1.4e-42, 45.8% id in 262 aa, and to Brucella melitensis oligopeptide transport system permease oppc bmeii0506 SWALL:Q8YCM2 (EMBL:AE009686) (276 aa) fasta scores: E(): 4.9e-42, 45.31% id in 267 aa; inner membrane component of binding-protein-dependent transport system 5030648 2661853 BB4728 Bordetella bronchiseptica RB50 inner membrane component of binding-protein-dependent transport system NP_891261.1 5029809 D 257310 CDS NP_891262.1 33603702 2661850 5030653..5032344 1 NC_002927.3 Similar to Agrobacterium tumefaciens ABC transporter nucleotide binding/ATPase atu3053 or agr_l_3504 SWALL:Q8UBG3 (EMBL:AE009236) (575 aa) fasta scores: E(): 1.8e-114, 61.32% id in 543 aa, and to Rhizobium meliloti oligopeptide ABC transporter ATP-binding protein rb0111 or smb20111 SWALL:Q92X51 (EMBL:AL603642) (546 aa) fasta scores: E(): 2e-83, 49.17% id in 543 aa; ABC transporter ATP-binding protein 5032344 2661850 BB4729 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_891262.1 5030653 D 257310 CDS NP_891263.1 33603703 2661869 5032338..5033660 1 NC_002927.3 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase 5033660 2661869 BB4730 Bordetella bronchiseptica RB50 allantoate amidohydrolase NP_891263.1 5032338 D 257310 CDS NP_891264.1 33603704 2661870 5033645..5034634 1 NC_002927.3 Similar to Pyrococcus abyssi phosphoglycerate dehydrogenase SerA-like or pab0514 SWALL:Q9V0M8 (EMBL:AJ248285) (307 aa) fasta scores: E(): 1e-35, 41.77% id in 304 aa, and to Pyrococcus furiosus phosphoglycerate dehydrogenase pf1394 SWALL:Q8U135 (EMBL:AE010242) (306 aa) fasta scores: E(): 2.4e-35, 42.05% id in 302 aa; phosphoglycerate dehydrogenase 5034634 2661870 BB4731 Bordetella bronchiseptica RB50 phosphoglycerate dehydrogenase NP_891264.1 5033645 D 257310 CDS NP_891265.1 33603705 2661852 5034637..5035440 1 NC_002927.3 Similar to Pseudomonas putida N-formylglutamate amidohydrolase hutG SWALL:O31201 (EMBL:AF032970) (267 aa) fasta scores: E(): 8e-45, 47.67% id in 258 aa, and to Pseudomonas aeruginosa N-formylglutamate amidohydrolase hutg or pa5091 SWALL:Q9HU92 (EMBL:AE004922) (266 aa) fasta scores: E(): 1.6e-44, 50.19% id in 259 aa; N-formylglutamate amidohydrolase 5035440 hutG 2661852 hutG Bordetella bronchiseptica RB50 N-formylglutamate amidohydrolase NP_891265.1 5034637 D 257310 CDS NP_891266.1 33603706 2661863 5035454..5035855 1 NC_002927.3 Similar to Pseudomonas aeruginosa biotin carboxyl carrier protein of acetyl-coa carboxylase accb or fabe or pa4847 SWALL:BCCP_PSEAE (SWALL:P37799) (156 aa) fasta scores: E(): 0.026, 27.74% id in 155 aa, and to Ralstonia solanacearum probable biotin carboxyl carrier protein of acetyl-coa carboxylase accb1 or rsc2786 or rs00061 SWALL:Q8XVP4 (EMBL:AL646071) (155 aa) fasta scores: E(): 0.025, 32.68% id in 153 aa; biotin carboxyl carrier protein of acetyl-CoA carboxylase 5035855 2661863 BB4733 Bordetella bronchiseptica RB50 biotin carboxyl carrier protein of acetyl-CoA carboxylase NP_891266.1 5035454 D 257310 CDS NP_891267.1 33603707 2661864 5035852..5036298 1 NC_002927.3 Similar to Bacillus subtilis biotin carboxyl carrier protein of acetyl-coa carboxylase accb or fabE SWALL:BCCP_BACSU (SWALL:P49786) (159 aa) fasta scores: E(): 5.7e-08, 36.29% id in 124 aa, and to Yersinia pestis biotin carboxyl carrier protein of acetyl-coa carboxylase accb or ypo3659 SWALL:Q8ZAX2 (EMBL:AJ414158) (154 aa) fasta scores: E(): 5.5e-08, 34.43% id in 151 aa; biotin carboxyl carrier protein of acetyl-CoA carboxylase 5036298 accB 2661864 accB Bordetella bronchiseptica RB50 biotin carboxyl carrier protein of acetyl-CoA carboxylase NP_891267.1 5035852 D 257310 CDS NP_891268.1 33603708 2661865 5036288..5037652 1 NC_002927.3 Similar to Escherichia coli biotin carboxylase accc or fabg or b3256 SWALL:ACCC_ECOLI (SWALL:P24182) (449 aa) fasta scores: E(): 1.4e-104, 61.67% id in 441 aa, and to Pseudomonas aeruginosa biotin carboxylase accc or fabg or pa4848 SWALL:ACCC_PSEAE (SWALL:P37798) (449 aa) fasta scores: E(): 1.5e-106, 62.13% id in 441 aa; biotin carboxylase 5037652 accC 2661865 accC Bordetella bronchiseptica RB50 biotin carboxylase NP_891268.1 5036288 D 257310 CDS NP_891269.1 33603709 2661109 5037699..5038922 1 NC_002927.3 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 5038922 2661109 BB4736 Bordetella bronchiseptica RB50 aspartate aminotransferase NP_891269.1 5037699 D 257310 CDS NP_891270.1 33603710 2663951 5038938..5039321 1 NC_002927.3 Similar to Myxococcus xanthus DfrA protein dfrA SWALL:DFRA_MYXXA (SWALL:O52178) (131 aa) fasta scores: E(): 1.8e-10, 39.2% id in 125 aa, and to Xanthomonas campestris translation initiation inhibitor yjgf or xcc3239 SWALL:AAM42509 (EMBL:AE012441) (126 aa) fasta scores: E(): 3.3e-12, 45.96% id in 124 aa; endoribonuclease 5039321 2663951 BB4737 Bordetella bronchiseptica RB50 endoribonuclease NP_891270.1 5038938 D 257310 CDS NP_891271.1 33603711 2663952 5039423..5040457 1 NC_002927.3 catalyzes the formation of selenophosphate from selenide and ATP; selenophosphate synthetase 5040457 selD 2663952 selD Bordetella bronchiseptica RB50 selenophosphate synthetase NP_891271.1 5039423 D 257310 CDS NP_891272.1 33603712 2659982 5040457..5041563 1 NC_002927.3 catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA; tRNA 2-selenouridine synthase 5041563 2659982 BB4739 Bordetella bronchiseptica RB50 tRNA 2-selenouridine synthase NP_891272.1 5040457 D 257310 CDS NP_891273.1 33603713 2660010 complement(5041573..5041917) 1 NC_002927.3 Similar to Xanthomonas axonopodis hypothetical protein Xac0269 xac0269 SWALL:AAM35161 (EMBL:AE011652) (111 aa) fasta scores: E(): 5e-05, 40.19% id in 102 aa, and to Pseudomonas aeruginosa hypothetical protein Pa0802 pa0802 SWALL:Q9I5D6 (EMBL:AE004515) (107 aa) fasta scores: E(): 0.018, 36.44% id in 107 aa; hypothetical protein 5041917 2660010 BB4740 Bordetella bronchiseptica RB50 hypothetical protein NP_891273.1 5041573 R 257310 CDS NP_891274.1 33603714 2660011 complement(5041914..5043533) 1 NC_002927.3 Similar to Xanthomonas campestris hypothetical protein Xcc3596 xcc3596 SWALL:AAM42866 (EMBL:AE012480) (540 aa) fasta scores: E(): 1.1e-55, 38.67% id in 530 aa, and to Xanthomonas campestris hypothetical protein Xcc0251 xcc0251 SWALL:AAM39570 (EMBL:AE012121) (538 aa) fasta scores: E(): 8.8e-47, 41.62% id in 543 aa; iron-regulated membrane protein 5043533 2660011 BB4741 Bordetella bronchiseptica RB50 iron-regulated membrane protein NP_891274.1 5041914 R 257310 CDS NP_891275.1 33603715 2659090 5043804..5044337 1 NC_002927.3 Pteviously sequenced as Bordetella bronchiseptica ECF sigma factor BupI SWALL:Q9L430 (EMBL:AJ251793) (177 aa) fasta scores: E(): 8.6e-67, 100% id in 177 aa; ECF sigma factor 5044337 bupI 2659090 bupI Bordetella bronchiseptica RB50 ECF sigma factor NP_891275.1 5043804 D 257310 CDS NP_891276.1 33603716 2659091 5044339..5045373 1 NC_002927.3 Previously sequenced as Bordetella bronchiseptica inner membrane sensor BupR SWALL:Q9L429 (EMBL:AJ251793) (344 aa) fasta scores: E(): 1.5e-131, 99.41% id in 344 aa; inner membrane sensor protein 5045373 bupR 2659091 bupR Bordetella bronchiseptica RB50 inner membrane sensor protein NP_891276.1 5044339 D 257310 CDS NP_891277.1 33603717 2659110 5045456..5048038 1 NC_002927.3 Previously sequenced as Bordetella bronchiseptica siderophore receptor precursor bfrZ SWALL:Q9L428 (EMBL:AJ251793) (860 aa) fasta scores: E(): 0, 100% id in 860 aa; siderophore receptor precursor 5048038 bfrZ 2659110 bfrZ Bordetella bronchiseptica RB50 siderophore receptor precursor NP_891277.1 5045456 D 257310 CDS NP_891278.1 33603718 2660020 5048253..5048690 1 NC_002927.3 Similar to Sphingomonas aromaticivorans hypothetical 14.5 kDa protein orf151 SWALL:O85848 (EMBL:AF079317) (137 aa) fasta scores: E(): 1.2e-16, 42.73% id in 117 aa, and to Caulobacter crescentus hypothetical protein Cc3645 cc3645 SWALL:Q9A2C0 (EMBL:AE006023) (187 aa) fasta scores: E(): 4.5e-08, 31.2% id in 141 aa; hypothetical protein 5048690 2660020 BB4745 Bordetella bronchiseptica RB50 hypothetical protein NP_891278.1 5048253 D 257310 CDS NP_891279.1 33603719 2660021 5048690..5049853 1 NC_002927.3 Similar to Caulobacter crescentus hypothetical protein Cc1841 cc1841 SWALL:Q9A785 (EMBL:AE005858) (375 aa) fasta scores: E(): 5.7e-73, 56.19% id in 363 aa, and to Mycobacterium tuberculosis hypothetical 38.7 kDa protein mcr or rv1143 or mt1176 or mtci65.10 SWALL:O06543 (EMBL:Z95584) (395 aa) fasta scores: E(): 1e-67, 50.96% id in 363 aa; hypothetical protein 5049853 2660021 BB4746 Bordetella bronchiseptica RB50 hypothetical protein NP_891279.1 5048690 D 257310 CDS NP_891280.1 33603720 2663949 complement(5049830..5050612) 1 NC_002927.3 Similar to Bacillus halodurans transcriptional regulator bh2137 SWALL:Q9KAZ9 (EMBL:AP001514) (251 aa) fasta scores: E(): 5.4e-17, 30.48% id in 246 aa, and to Streptomyces coelicolor iclr-family transcriptional regulatory protein sco4989 or 2sck36.12 SWALL:Q93JK5 (EMBL:AL591857) (254 aa) fasta scores: E(): 1.4e-12, 29.91% id in 244 aa; transcriptional regulator 5050612 2663949 BB4747 Bordetella bronchiseptica RB50 transcriptional regulator NP_891280.1 5049830 R 257310 CDS NP_891281.1 33603721 2663950 5050736..5051752 1 NC_002927.3 Similar to Xylella fastidiosa hypothetical protein Xf0451 xf0451 SWALL:Q9PG51 (EMBL:AE003895) (363 aa) fasta scores: E(): 3.4e-41, 41.69% id in 331 aa, and to Pseudomonas aeruginosa probable oxidoreductase pa1833 SWALL:Q9I2R2 (EMBL:AE004609) (330 aa) fasta scores: E(): 2.1e-39, 43.37% id in 302 aa; zinc-binding dehydrogenase 5051752 2663950 BB4748 Bordetella bronchiseptica RB50 zinc-binding dehydrogenase NP_891281.1 5050736 D 257310 CDS NP_891282.1 33603722 2659078 complement(5051812..5052864) 1 NC_002927.3 Similar to Agrobacterium tumefaciens hypothetical protein atu4727 atu4727 or agr_l_312 SWALL:Q8U6S9 (EMBL:AE009401) (329 aa) fasta scores: E(): 1.4e-38, 39.27% id in 331 aa, and to Comamonas testosteroni Orf4 protein orf4 SWALL:Q9S155 (EMBL:AB024335) (325 aa) fasta scores: E(): 2e-37, 39.25% id in 321 aa; hypothetical protein 5052864 2659078 BB4749 Bordetella bronchiseptica RB50 hypothetical protein NP_891282.1 5051812 R 257310 CDS NP_891283.1 33603723 2658963 complement(5052923..5053690) 1 NC_002927.3 Similar to Rhodopseudomonas palustris 2-hydroxycyclohexanecarboxyl-coa dehyrogenase badH SWALL:O07457 (EMBL:U75363) (255 aa) fasta scores: E(): 5.2e-53, 58.82% id in 255 aa, and to Thauera aromatica alcohol dehydrogenase SWALL:Q9AJT2 (EMBL:AJ278289) (249 aa) fasta scores: E(): 4.6e-39, 49.8% id in 253 aa; short chain dehyrogenase 5053690 2658963 BB4750 Bordetella bronchiseptica RB50 short chain dehyrogenase NP_891283.1 5052923 R 257310 CDS NP_891284.1 33603724 2658964 complement(5053711..5054208) 1 NC_002927.3 Similar to Sulfolobus tokodaii hypothetical protein St0068 st0068 SWALL:Q976X1 (EMBL:AP000981) (165 aa) fasta scores: E(): 1.3e-10, 36.36% id in 154 aa, and to Sulfolobus solfataricus regulatory protein, sso3136 SWALL:Q97U86 (EMBL:AE006904) (161 aa) fasta scores: E(): 2.5e-09, 34.41% id in 154 aa; hypothetical protein 5054208 2658964 BB4751 Bordetella bronchiseptica RB50 hypothetical protein NP_891284.1 5053711 R 257310 CDS NP_891285.1 33603725 2663940 complement(5054205..5055359) 1 NC_002927.3 Similar to Bacillus subtilis acyl-CoA dehydrogenase MmgC SWALL:ACDB_BACSU (SWALL:P45857) (379 aa) fasta scores: E(): 5e-56, 44.15% id in 385 aa, and to Mycobacterium leprae probable acyl-CoA dehydrogenase fadE25 or Acd or ml0737 or b1308_f1_34 SWALL:ACDP_MYCLE (SWALL:P46703) (389 aa) fasta scores: E(): 1.7e-54, 41.99% id in 381 aa; acyl-CoA dehydrogenase 5055359 2663940 BB4752 Bordetella bronchiseptica RB50 acyl-CoA dehydrogenase NP_891285.1 5054205 R 257310 CDS NP_891286.1 33603726 2658969 complement(5055335..5056597) 1 NC_002927.3 Similar to Ralstonia solanacearum transmembrane protein rsc0796 or rs05041 SWALL:Q8Y194 (EMBL:AL646061) (420 aa) fasta scores: E(): 6.4e-89, 56.54% id in 405 aa, and to Pseudomonas aeruginosa hypothetical protein Pa0446 pa0446 SWALL:Q9I672 (EMBL:AE004482) (407 aa) fasta scores: E(): 1.9e-86, 53.07% id in 407 aa; hypothetical protein 5056597 2658969 BB4753 Bordetella bronchiseptica RB50 hypothetical protein NP_891286.1 5055335 R 257310 CDS NP_891287.1 33603727 2658970 complement(5056764..5057738) 1 NC_002927.3 Similar to Variovorax paradoxus, and Burkholderia cepacia 2,4-diphenoxyacetic acid gene cluster SWALL:Q9RHQ7 (EMBL:AB028643) (337 aa) fasta scores: E(): 2.7e-39, 40.26% id in 303 aa, and to Pseudomonas putida, and Pseudomonas sp. hypothetical 34.5 kDa protein in clcb-clcd intergenic region precursor SWALL:YCLC_PSEPU (SWALL:Q47100) (329 aa) fasta scores: E(): 1.3e-36, 40.85% id in 306 aa; hypothetical protein 5057738 2658970 BB4754 Bordetella bronchiseptica RB50 hypothetical protein NP_891287.1 5056764 R 257310 CDS NP_891288.1 33603728 2659026 5057926..5058696 1 NC_002927.3 Similar to Clostridium beijerinckii crotonase Crt SWALL:Q8RMI7 (EMBL:AF494018) (261 aa) fasta scores: E(): 3.3e-35, 43.56% id in 241 aa, and to Thermoanaerobacter tengcongensis enoyl-CoA hydratase/carnithine racemase caid or tte0544 SWALL:Q8RC92 (EMBL:AE013024) (260 aa) fasta scores: E(): 1.1e-37, 45.34% id in 247 aa; enoyl-CoA hydratase 5058696 2659026 BB4755 Bordetella bronchiseptica RB50 enoyl-CoA hydratase NP_891288.1 5057926 D 257310 CDS NP_891289.1 33603729 2659027 5058743..5060761 1 NC_002927.3 Similar to Escherichia coli 2,4-dienoyl-CoA reductase [NADPH] fadh or b3081 SWALL:FADH_ECOLI (SWALL:P42593) (671 aa) fasta scores: E(): 6.2e-116, 50.07% id in 671 aa, and to Streptomyces coelicolor 2,4-dienoyl-CoA reductase fadh or sco7066 or sc4g1.32 SWALL:Q9FC18 (EMBL:AL391039) (671 aa) fasta scores: E(): 4.4e-123, 52.37% id in 674 aa; 2,4-dienoyl-CoA reductase 5060761 fadH 2659027 fadH Bordetella bronchiseptica RB50 2,4-dienoyl-CoA reductase NP_891289.1 5058743 D 257310 CDS NP_891290.1 33603730 2659094 5060824..5061633 1 NC_002927.3 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 5061633 2659094 BB4757 Bordetella bronchiseptica RB50 enoyl-CoA hydratase NP_891290.1 5060824 D 257310 CDS NP_891291.1 33603731 2659023 5061721..5062170 1 NC_002927.3 Similar to Rhodopseudomonas palustris transcriptional activatory protein BadR badR SWALL:BADR_RHOPA (SWALL:O07458) (175 aa) fasta scores: E(): 2.5e-20, 43.26% id in 141 aa, and to Escherichia coli homoprotocatechuate degradative operon repressor hpcr or hpaR SWALL:HPCR_ECOLI (SWALL:Q07095) (148 aa) fasta scores: E(): 1.9e-05, 29.63% id in 135 aa; MarR family transcriptional regulator 5062170 2659023 BB4758 Bordetella bronchiseptica RB50 MarR family transcriptional regulator NP_891291.1 5061721 D 257310 CDS NP_891292.1 33603732 2659024 5062194..5062943 1 NC_002927.3 Similar to Bradyrhizobium japonicum electron transfer flavoprotein beta-subunit etfb or etfS SWALL:ETFB_BRAJA (SWALL:P53575) (249 aa) fasta scores: E(): 4.9e-58, 68.27% id in 249 aa, and to Paracoccus denitrificans electron transfer flavoprotein beta-subunit etfB SWALL:ETFB_PARDE (SWALL:P38975) (252 aa) fasta scores: E(): 1.3e-54, 64.82% id in 253 aa; electron transfer flavoprotein subunit beta 5062943 etfB 2659024 etfB Bordetella bronchiseptica RB50 electron transfer flavoprotein subunit beta NP_891292.1 5062194 D 257310 CDS NP_891293.1 33603733 2659032 5062940..5063872 1 NC_002927.3 Similar to Bradyrhizobium japonicum electron transfer flavoprotein alpha-subunit etfa or etfL SWALL:ETFA_BRAJA (SWALL:P53573) (314 aa) fasta scores: E(): 8e-64, 68.38% id in 310 aa, and to Paracoccus denitrificans electron transfer flavoprotein alpha-subunit etfA SWALL:ETFA_PARDE (SWALL:P38974) (307 aa) fasta scores: E(): 5.4e-59, 65.14% id in 307 aa; electron transfer flavoprotein subunit alpha 5063872 etfA 2659032 etfA Bordetella bronchiseptica RB50 electron transfer flavoprotein subunit alpha NP_891293.1 5062940 D 257310 CDS NP_891294.1 33603734 2659045 5064222..5066486 1 NC_002927.3 Previously sequenced as Bordetella bronchiseptica exogenous ferric siderophore receptor BfrA SWALL:P70847 (EMBL:U56084) (754 aa) fasta scores: E(): 0, 100% id in 754 aa; exogenous ferric siderophore receptor 5066486 bfrA 2659045 bfrA Bordetella bronchiseptica RB50 exogenous ferric siderophore receptor NP_891294.1 5064222 D 257310 CDS NP_891295.1 33603735 2659046 complement(5066559..5067536) 1 NC_002927.3 Similar to Comamonas testosteroni OrfJ protein orfJ SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 1.7e-37, 35.91% id in 323 aa, and to Bordetella pertussis hypothetical 34.9 kDa protein in brg1 3'region precursor SWALL:YBR5_BORPE (SWALL:O30446) (323 aa) fasta scores: E(): 2.2e-37, 39.31% id in 323 aa; hypothetical protein 5067536 2659046 BB4762 Bordetella bronchiseptica RB50 hypothetical protein NP_891295.1 5066559 R 257310 CDS NP_891296.1 33603736 2661174 complement(5067578..5068063) 1 NC_002927.3 Similar to Archaeoglobus fulgidus maoc protein af2313 SWALL:O27971 (EMBL:AE000944) (151 aa) fasta scores: E(): 3.9e-12, 36.73% id in 147 aa, and to Sulfolobus tokodaii hypothetical protein St0068 st0068 SWALL:Q976X1 (EMBL:AP000981) (165 aa) fasta scores: E(): 1.2e-10, 32.9% id in 155 aa; hypothetical protein 5068063 2661174 BB4763 Bordetella bronchiseptica RB50 hypothetical protein NP_891296.1 5067578 R 257310 CDS NP_891297.1 33603737 2661175 5068267..5069013 1 NC_002927.3 Similar to Bacillus subtilis 3-oxoacyl-ACP reductase fabG SWALL:FABG_BACSU (SWALL:P51831) (246 aa) fasta scores: E(): 9.3e-32, 44.53% id in 247 aa, and to Sulfolobus tokodaii 3-oxoacyl-ACP reductase st1109 SWALL:Q972M3 (EMBL:AP000985) (250 aa) fasta scores: E(): 3.6e-35, 46.18% id in 249 aa; 3-oxoacyl-ACP reductase 5069013 fabG 2661175 fabG Bordetella bronchiseptica RB50 3-oxoacyl-ACP reductase NP_891297.1 5068267 D 257310 CDS NP_891298.1 33603738 2659089 5069039..5070235 1 NC_002927.3 Similar to Thermoplasma volcanium L-carnitine dehydratase tv1186 or tvg1215416 SWALL:Q979H5 (EMBL:AP000995) (399 aa) fasta scores: E(): 1e-56, 38.88% id in 396 aa, and to Pseudomonas aeruginosa hypothetical protein Pa3592 pa3592 SWALL:Q9HY34 (EMBL:AE004779) (395 aa) fasta scores: E(): 1.2e-50, 36.64% id in 393 aa; hypothetical protein 5070235 2659089 BB4765 Bordetella bronchiseptica RB50 hypothetical protein NP_891298.1 5069039 D 257310 CDS NP_891299.1 33603739 2659139 5070268..5071521 1 NC_002927.3 Similar to Methanosarcina mazei beta-ketoacyl synthase/thiolase mm0870 SWALL:AAM30566 (EMBL:AE013312) (390 aa) fasta scores: E(): 1.6e-31, 37.7% id in 419 aa, and to Methanosarcina acetivorans acetyl-coa c-acyltransferase ma4042 SWALL:Q8TIU9 (EMBL:AE011116) (390 aa) fasta scores: E(): 1.2e-30, 35.73% id in 403 aa; thiolase 5071521 2659139 BB4766 Bordetella bronchiseptica RB50 thiolase NP_891299.1 5070268 D 257310 CDS NP_891300.1 33603740 2659112 5071554..5072417 1 NC_002927.3 Similar to Pseudomonas aeruginosa (R)-specific enoyl-CoA hydratase PhaJ2 or pa1018 SWALL:Q9LBK1 (EMBL:AB040026) (288 aa) fasta scores: E(): 2.7e-50, 50.69% id in 286 aa, and to Mycobacterium tuberculosis maoc family protein rv3389c or mtv004.47c or mt3496 SWALL:Q11198 (EMBL:U27357) (290 aa) fasta scores: E(): 4.4e-34, 43.49% id in 292 aa; (R)-specific enoyl-CoA hydratase 5072417 2659112 BB4767 Bordetella bronchiseptica RB50 (R)-specific enoyl-CoA hydratase NP_891300.1 5071554 D 257310 CDS NP_891301.1 33603741 2659113 5072446..5073591 1 NC_002927.3 Similar to Mycobacterium tuberculosis fatty acid-CoA racemase far or rv0855 or mtv043.48 or mt0878 SWALL:O53867 (EMBL:AL022004) (359 aa) fasta scores: E(): 4.8e-55, 44.56% id in 359 aa, and to Streptomyces coelicolor racemase sco6730 or sc5f2a.13 SWALL:Q9X7N6 (EMBL:AL049587) (398 aa) fasta scores: E(): 1.6e-66, 50.27% id in 368 aa; racemase 5073591 2659113 BB4768 Bordetella bronchiseptica RB50 racemase NP_891301.1 5072446 D 257310 CDS NP_891302.1 33603742 2659137 5073647..5074516 1 NC_002927.3 Similar to Brucella melitensis transcriptional regulator bmeii1022 SWALL:Q8YB78 (EMBL:AE009735) (284 aa) fasta scores: E(): 4.8e-34, 38.6% id in 272 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa1630 SWALL:Q9I392 (EMBL:AE004590) (288 aa) fasta scores: E(): 7.7e-34, 37.41% id in 286 aa; transcriptional regulator 5074516 2659137 BB4769 Bordetella bronchiseptica RB50 transcriptional regulator NP_891302.1 5073647 D 257310 CDS NP_891303.1 33603743 2659138 5074585..5075634 1 NC_002927.3 Similar to Rhodococcus globerulus biphenyl-2,3-diol 1,2-dioxygenase III BphC3 SWALL:BHC3_RHOGO (SWALL:P47233) (189 aa) fasta scores: E(): 6.1e-06, 36% id in 125 aa, and to Rhizobium meliloti hypothetical protein r00986 or smc00115 SWALL:Q92RA9 (EMBL:AL591785) (296 aa) fasta scores: E(): 3.7e-05, 24.46% id in 233 aa; dioxygenase 5075634 2659138 BB4770 Bordetella bronchiseptica RB50 dioxygenase NP_891303.1 5074585 D 257310 CDS NP_891304.1 33603744 2660321 5075631..5076521 1 NC_002927.3 Similar to Escherichia coli 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase MhpC or b0349 SWALL:MHPC_ECOLI (SWALL:P77044) (293 aa) fasta scores: E(): 1.4e-17, 30.07% id in 276 aa, and to Rhodococcus sp. RHA1 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase BphD2 SWALL:Q9KWQ6 (EMBL:AB030672) (292 aa) fasta scores: E(): 2.8e-19, 36.6% id in 265 aa; 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase 5076521 mhpC 2660321 mhpC Bordetella bronchiseptica RB50 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase NP_891304.1 5075631 D 257310 CDS NP_891305.1 33603745 2659011 complement(5076594..5077565) 1 NC_002927.3 Similar to Pseudomonas sp. vanillate O-demethylase oxidoreductase VanB SWALL:VANB_PSESP (SWALL:O05617) (317 aa) fasta scores: E(): 5.7e-59, 53.07% id in 309 aa, and to Acinetobacter calcoaceticus vanillate O-demethylase oxidoreductase vanB SWALL:VANB_ACICA (SWALL:O24840) (318 aa) fasta scores: E(): 6.2e-45, 42.76% id in 311 aa; vanillate O-demethylase oxidoreductase 5077565 vanB 2659011 vanB Bordetella bronchiseptica RB50 vanillate O-demethylase oxidoreductase NP_891305.1 5076594 R 257310 CDS NP_891306.1 33603746 2662146 complement(5077562..5078872) 1 NC_002927.3 Similar to Comamonas testosteroni 3-chlorobenzoate-3,4-dioxygenase oxygenase subunit CbaA SWALL:CBAA_COMTE (SWALL:Q44256) (432 aa) fasta scores: E(): 1.1e-49, 38.67% id in 393 aa, and to Pseudomonas putida phthalate 4,5-dioxygenase oxygenase subunit Pht3 SWALL:PHT3_PSEPU (SWALL:Q05183) (439 aa) fasta scores: E(): 6.1e-39, 37.94% id in 398 aa; 3-chlorobenzoate-3,4-dioxygenase oxygenase 5078872 2662146 BB4773 Bordetella bronchiseptica RB50 3-chlorobenzoate-3,4-dioxygenase oxygenase NP_891306.1 5077562 R 257310 CDS NP_891307.1 33603747 2662147 complement(5078889..5080010) 1 NC_002927.3 Similar to Serratia marcescens iron(III)-binding periplasmic protein precursor SfuA SWALL:SFUA_SERMA (SWALL:P21408) (338 aa) fasta scores: E(): 0.044, 25.51% id in 243 aa, and to Anabaena sp. ferric iron-binding periplasmic protein of ABC transporter alr1382 SWALL:Q8YX36 (EMBL:AP003585) (336 aa) fasta scores: E(): 0.01, 21.8% id in 321 aa; iron ABC transporter substrate-binding protein 5080010 2662147 BB4774 Bordetella bronchiseptica RB50 iron ABC transporter substrate-binding protein NP_891307.1 5078889 R 257310 CDS NP_891308.1 33603748 2659278 complement(5080142..5081824) 1 NC_002927.3 Similar to Fusobacterium nucleatum iron(III)-transport system permease fn0309 SWALL:Q8RGI4 (EMBL:AE010543) (560 aa) fasta scores: E(): 2.1e-29, 24.59% id in 553 aa, and to Pasteurella multocida afub afub_2 or pm1455 SWALL:Q9CKZ5 (EMBL:AE006182) (564 aa) fasta scores: E(): 4.1e-33, 26.01% id in 569 aa; iron(III)-transport system permease 5081824 2659278 BB4775 Bordetella bronchiseptica RB50 iron(III)-transport system permease NP_891308.1 5080142 R 257310 CDS NP_891309.1 33603749 2662240 complement(5081830..5082948) 1 NC_002927.3 Similar to Vibrio cholerae iron vc0610 SWALL:Q9KUB3 (EMBL:AE004146) (343 aa) fasta scores: E(): 5.2e-32, 36.61% id in 355 aa, and to Ralstonia solanacearum probable ATP-binding ABC transporter protein rsc2939 or rs00150 SWALL:Q8XV92 (EMBL:AL646072) (358 aa) fasta scores: E(): 7.1e-39, 41.64% id in 365 aa; iron(III)-transport ATP-binding protein 5082948 2662240 BB4776 Bordetella bronchiseptica RB50 iron(III)-transport ATP-binding protein NP_891309.1 5081830 R 257310 CDS NP_891310.1 33603750 2659726 complement(5082959..5084122) 1 NC_002927.3 Similar to Burkholderia cepacia phthalate dihydrodiol dehydrogenase OphB SWALL:Q9ZFQ6 (EMBL:AF095748) (391 aa) fasta scores: E(): 5.6e-59, 42.3% id in 390 aa, and to Pseudomonas putida 4,5,-dihydroxyphthalate dehydrogenase Pht4 SWALL:PHT4_PSEPU (SWALL:Q05184) (410 aa) fasta scores: E(): 1.6e-56, 43.14% id in 394 aa; dehydrogenase 5084122 2659726 BB4777 Bordetella bronchiseptica RB50 dehydrogenase NP_891310.1 5082959 R 257310 CDS NP_891311.1 33603751 2659033 complement(5084151..5084648) 1 NC_002927.3 Similar to Arthrobacter keyseri oxalocitramalate aldolase pcmE SWALL:Q9AGL6 (EMBL:AF331043) (230 aa) fasta scores: E(): 5.9e-10, 34.41% id in 154 aa, and to Rhizobium meliloti hypothetical protein r01765 r01765 or smc00502 SWALL:Q92PI8 (EMBL:AL591788) (224 aa) fasta scores: E(): 7.7e-10, 39.49% id in 119 aa; hypothetical protein 5084648 2659033 BB4778 Bordetella bronchiseptica RB50 hypothetical protein NP_891311.1 5084151 R 257310 CDS NP_891312.1 33603752 2659374 complement(5084645..5084836) 1 NC_002927.3 no significant database matches; hypothetical protein 5084836 2659374 BB4779 Bordetella bronchiseptica RB50 hypothetical protein NP_891312.1 5084645 R 257310 CDS NP_891313.1 33603753 2659375 complement(5084870..5085655) 1 NC_002927.3 Similar to Agrobacterium tumefaciens NAD/NADP dependent oxidoreductase atu0990 or agr_c_1817 SWALL:Q8UGP5 (EMBL:AE009064) (293 aa) fasta scores: E(): 4.8e-36, 49.02% id in 257 aa, and to Rhizobium meliloti oxidoreductase r00362 or smc01157 SWALL:Q92SK9 (EMBL:AL591783) (259 aa) fasta scores: E(): 4.4e-34, 45.91% id in 257 aa; short chain dehydrogenase 5085655 2659375 BB4780 Bordetella bronchiseptica RB50 short chain dehydrogenase NP_891313.1 5084870 R 257310 CDS NP_891314.1 33603754 2659376 complement(5085666..5086484) 1 NC_002927.3 catalyzes the formation of L-aspartate to iminoaspartate in NAD(+) biosynthesis; L-aspartate dehydrogenase 5086484 2659376 BB4781 Bordetella bronchiseptica RB50 L-aspartate dehydrogenase NP_891314.1 5085666 R 257310 CDS NP_891315.1 33603755 2659761 5086650..5087615 1 NC_002927.3 Similar to Escherichia coli, and Escherichia coli O157:H7 glycine cleavage system transcriptional activator gcva or b2808 or z4125 or ecs3668 SWALL:GCVA_ECOLI (SWALL:P32064) (305 aa) fasta scores: E(): 8.6e-20, 35.83% id in 307 aa, and to Salmonella typhimurium, and Salmonella typhi regulator of gcv operon gcva or stm2982 or sty3122 SWALL:Q8XEJ8 (EMBL:AE008836) (305 aa) fasta scores: E(): 4.9e-19, 35.17% id in 307 aa; LysR family transcriptional regulator 5087615 2659761 BB4782 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_891315.1 5086650 D 257310 CDS NP_891316.1 33603756 2660226 complement(5087643..5088050) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0647; Similar to Pyrococcus abyssi hypothetical protein Pab1062 pab1062 SWALL:Q9UY93 (EMBL:AJ248288) (130 aa) fasta scores: E(): 4.2e-09, 30.32% id in 122 aa, and to Pyrococcus horikoshii hypothetical 14.0 kDa protein Ph0353 ph0353 SWALL:Y353_PYRHO (SWALL:O58091) (134 aa) fasta scores: E(): 2.2e-08, 31.4% id in 121 aa; hypothetical protein 5088050 2660226 BB4783 Bordetella bronchiseptica RB50 hypothetical protein NP_891316.1 5087643 R 257310 CDS NP_891317.1 33603757 2663927 complement(5088047..5089321) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0648; Similar to Rhizobium loti hypothetical protein Mll1737 mll1737 SWALL:Q98JX4 (EMBL:AP002998) (416 aa) fasta scores: E(): 6.6e-31, 29.69% id in 421 aa, and to Methanococcus jannaschii hypothetical protein Mj1313 mj1313 SWALL:Q58709 (EMBL:U67571) (403 aa) fasta scores: E(): 2e-30, 27.94% id in 390 aa; hypothetical protein 5089321 2663927 BB4784 Bordetella bronchiseptica RB50 hypothetical protein NP_891317.1 5088047 R 257310 CDS NP_891318.1 33603758 2663928 complement(5089339..5090310) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0649; Similar to Rhizobium meliloti hypothetical protein ra1058 ra1058 or sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 2.2e-43, 43.16% id in 322 aa, and to Agrobacterium tumefaciens hypothetical protein atu4727 atu4727 or agr_l_312 SWALL:Q8U6S9 (EMBL:AE009401) (329 aa) fasta scores: E(): 8.3e-43, 41.66% id in 324 aa; hypothetical protein 5090310 2663928 BB4785 Bordetella bronchiseptica RB50 hypothetical protein NP_891318.1 5089339 R 257310 CDS NP_891319.1 33603759 2663929 5090417..5091379 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0650; Similar to Pseudomonas aeruginosa probable transcriptional regulator pa2206 SWALL:Q9I1R1 (EMBL:AE004647) (315 aa) fasta scores: E(): 9.7e-28, 32.46% id in 308 aa, and to Xanthomonas campestris galactose-binding protein regulator gbpr or xcc1748 SWALL:AAM41039 (EMBL:AE012276) (323 aa) fasta scores: E(): 2.3e-25, 31.84% id in 314 aa; LysR family transcriptional regulator 5091379 2663929 BB4786 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_891319.1 5090417 D 257310 CDS NP_891320.1 33603760 2660000 5091498..5093219 1 NC_002927.3 component of the membrane-bound D-lactate oxidase, FAD-binding, NADH independent; D-lactate dehydrogenase 5093219 dld 2660000 dld Bordetella bronchiseptica RB50 D-lactate dehydrogenase NP_891320.1 5091498 D 257310 CDS NP_891321.1 33603761 2660019 complement(5093263..5094393) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0652; Similar to Ralstonia solanacearum acyl-coa dehydrogenase oxidoreductase rsc2044 or rs03609 SWALL:Q8XXR9 (EMBL:AL646068) (376 aa) fasta scores: E(): 1.2e-50, 47.07% id in 376 aa, and to Caulobacter crescentus acyl-coa dehydrogenase family protein cc1311 SWALL:Q9A8P2 (EMBL:AE005806) (401 aa) fasta scores: E(): 9.5e-46, 40.47% id in 378 aa; acyl-CoA dehydrogenase 5094393 2660019 BB4788 Bordetella bronchiseptica RB50 acyl-CoA dehydrogenase NP_891321.1 5093263 R 257310 CDS NP_891322.1 33603762 2659067 complement(5094407..5095597) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0653; Similar to Ralstonia solanacearum acyl-coa dehydrogenase oxidoreductase rsc2045 or rs03610 SWALL:Q8XXR8 (EMBL:AL646068) (398 aa) fasta scores: E(): 9.8e-96, 58.14% id in 399 aa, and to Caulobacter crescentus acyl-coa dehydrogenase family protein cc1310 SWALL:Q9A8P3 (EMBL:AE005806) (404 aa) fasta scores: E(): 2.4e-81, 50.49% id in 404 aa; acyl-CoA dehydrogenase 5095597 2659067 BB4789 Bordetella bronchiseptica RB50 acyl-CoA dehydrogenase NP_891322.1 5094407 R 257310 CDS NP_891323.1 33603763 2659068 complement(5095778..5096797) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0654; Similar to Comamonas testosteroni OrfJ protein orfJ SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 4.1e-37, 37.42% id in 326 aa, and to Rhizobium meliloti hypothetical protein ra1058 ra1058 or sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 1.2e-34, 36.01% id in 311 aa; hypothetical protein 5096797 2659068 BB4790 Bordetella bronchiseptica RB50 hypothetical protein NP_891323.1 5095778 R 257310 CDS NP_891324.1 33603764 2662059 complement(5096930..5098102) 1 NC_002927.3 catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine; acetylornithine deacetylase 5098102 2662059 BB4791 Bordetella bronchiseptica RB50 acetylornithine deacetylase NP_891324.1 5096930 R 257310 CDS NP_891325.1 33603765 2662167 complement(5098095..5098769) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0656; Similar to Pseudomonas aeruginosa hypothetical protein Pa5391 pa5391 SWALL:Q9HTH3 (EMBL:AE004951) (224 aa) fasta scores: E(): 4.7e-54, 68.3% id in 224 aa, and to Aeropyrum pernix hypothetical protein Ape1388 ape1388 SWALL:Q9YC63 (EMBL:AP000061) (301 aa) fasta scores: E(): 3.6e-18, 42.77% id in 166 aa; hypothetical protein 5098769 2662167 BB4792 Bordetella bronchiseptica RB50 hypothetical protein NP_891325.1 5098095 R 257310 CDS NP_891326.1 33603766 2662168 complement(5098780..5099217) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0657; Similar to Pseudomonas aeruginosa hypothetical protein Pa5392 pa5392 SWALL:Q9HTH2 (EMBL:AE004951) (140 aa) fasta scores: E(): 7.3e-50, 93.52% id in 139 aa, and to Corynebacterium glutamicum translation initiation inhibitor cgl0152 SWALL:BAB97545 (EMBL:AP005274) (135 aa) fasta scores: E(): 1.2e-09, 40.36% id in 109 aa; endoribonuclease 5099217 2662168 BB4793 Bordetella bronchiseptica RB50 endoribonuclease NP_891326.1 5098780 R 257310 CDS NP_891327.1 33603767 2662227 complement(5099239..5100513) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0658; Similar to Pseudomonas aeruginosa hypothetical protein Pa5393 pa5393 SWALL:Q9HTH1 (EMBL:AE004951) (450 aa) fasta scores: E(): 3.4e-128, 75.96% id in 416 aa, and to Synechocystis sp. hypothetical protein Slr0801 slr0801 SWALL:Q55951 (EMBL:D64005) (416 aa) fasta scores: E(): 6.2e-54, 40.59% id in 404 aa; hypothetical protein 5100513 2662227 BB4794 Bordetella bronchiseptica RB50 hypothetical protein NP_891327.1 5099239 R 257310 CDS NP_891328.1 33603768 2662228 5100878..5101861 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0659; Similar to Ralstonia solanacearum oxidoreductase rsc2891 or rs00208 SWALL:Q8XVE0 (EMBL:AL646072) (338 aa) fasta scores: E(): 3e-76, 66.56% id in 332 aa, and to Rhizobium loti dehydrogenase, zinc-binding alcohol dehydrogenase, NADPH quinone oxidoreductase, oxidoreductase mlr3212 SWALL:Q98GR0 (EMBL:AP003001) (329 aa) fasta scores: E(): 2.9e-70, 60.06% id in 323 aa; zinc-binding dehydrogenase 5101861 2662228 BB4795 Bordetella bronchiseptica RB50 zinc-binding dehydrogenase NP_891328.1 5100878 D 257310 CDS NP_891329.1 33603769 2662229 complement(5101906..5102889) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0660; Similar to Pseudomonas aeruginosa probable transcriptional regulator pa0218 SWALL:Q9I6S0 (EMBL:AE004459) (306 aa) fasta scores: E(): 2.3e-27, 32.88% id in 298 aa, and to Rhizobium loti transcriptional regulator mll7443 SWALL:Q986A7 (EMBL:AP003011) (303 aa) fasta scores: E(): 4.9e-21, 29.09% id in 299 aa; LysR family transcriptional regulator 5102889 2662229 BB4796 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_891329.1 5101906 R 257310 CDS NP_891330.1 33603770 2662223 complement(5103037..5105178) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0661; Similar to Entamoeba histolytica acetyl-CoA synthetase SWALL:Q9NAT4 (EMBL:AF286346) (713 aa) fasta scores: E(): 1.4e-56, 32.46% id in 687 aa, and to Pseudomonas paucimobilis feruloyl-CoA synthetase ferA SWALL:Q8RR27 (EMBL:AB072376) (709 aa) fasta scores: E(): 1.2e-65, 35.7% id in 703 aa; acetyl-CoA synthetase 5105178 2662223 BB4797 Bordetella bronchiseptica RB50 acetyl-CoA synthetase NP_891330.1 5103037 R 257310 CDS NP_891331.1 33603771 2659209 complement(5105178..5105957) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0662; Similar to Clostridium perfringens 3-hydroxybutryl-CoA dehydratase Crt or cpe2301 SWALL:Q8XI23 (EMBL:AP003193) (260 aa) fasta scores: E(): 2.2e-26, 35.06% id in 251 aa, and to Xanthomonas axonopodis 3-hydroxybutyryl-CoA dehydratase Crt or xac1584 SWALL:AAM36452 (EMBL:AE011790) (260 aa) fasta scores: E(): 3.3e-27, 37.5% id in 256 aa; enoyl-CoA hydratase 5105957 2659209 BB4798 Bordetella bronchiseptica RB50 enoyl-CoA hydratase NP_891331.1 5105178 R 257310 CDS NP_891332.1 33603772 2659210 5106356..5107249 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0663; Similar to Thermoanaerobacter tengcongensis ABC-type nitrate/sulfonate/taurine/bicarbonate transport systems, periplasmic components taua or tte0643 SWALL:Q8RC09 (EMBL:AE013032) (336 aa) fasta scores: E(): 1.4e-15, 25.25% id in 297 aa, and to Clostridium acetobutylicum ABC transporter periplasmic-binding, cac0620 SWALL:Q97LE2 (EMBL:AE007577) (338 aa) fasta scores: E(): 1.6e-08, 22.46% id in 276 aa; nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein 5107249 2659210 BB4799 Bordetella bronchiseptica RB50 nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein NP_891332.1 5106356 D 257310 CDS NP_891333.1 33603773 2659205 5107313..5108332 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0664; Similar to Agrobacterium tumefaciens hypothetical protein atu4727 atu4727 or agr_l_312 SWALL:Q8U6S9 (EMBL:AE009401) (329 aa) fasta scores: E(): 1.9e-44, 40.72% id in 329 aa, and to Rhizobium meliloti hypothetical protein ra1058 ra1058 or sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 2.5e-44, 40.06% id in 322 aa; hypothetical protein 5108332 2659205 BB4800 Bordetella bronchiseptica RB50 hypothetical protein NP_891333.1 5107313 D 257310 CDS NP_891334.1 33603774 2659206 5108389..5109369 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0665; Similar to Saccharopolyspora erythraea thymidine diphosphoglucose 4,6-dehydratase gdH SWALL:Q54116 (EMBL:L37354) (329 aa) fasta scores: E(): 7.1e-13, 26.52% id in 328 aa, and to Streptomyces tenebrarius apre SWALL:Q9F5R6 (EMBL:AF306787) (332 aa) fasta scores: E(): 9.4e-13, 29.42% id in 333 aa; thymidine diphosphoglucose 4,6-dehydratase 5109369 2659206 BB4801 Bordetella bronchiseptica RB50 thymidine diphosphoglucose 4,6-dehydratase NP_891334.1 5108389 D 257310 CDS NP_891335.1 33603775 2659696 complement(5109569..5111401) 1 NC_002927.3 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 5111401 glmS 2659696 glmS Bordetella bronchiseptica RB50 glucosamine--fructose-6-phosphate aminotransferase NP_891335.1 5109569 R 257310 CDS NP_891336.1 33603776 2659690 5111551..5112039 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0667; transcription regulator AsnC 5112039 2659690 BB4803 Bordetella bronchiseptica RB50 transcription regulator AsnC NP_891336.1 5111551 D 257310 CDS NP_891337.1 33603777 2659155 complement(5112061..5113278) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0668; thiolase 5113278 2659155 BB4804 Bordetella bronchiseptica RB50 thiolase NP_891337.1 5112061 R 257310 CDS NP_891338.1 33603778 2659163 complement(5113275..5115392) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0669; bifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase 5115392 2659163 BB4805 Bordetella bronchiseptica RB50 bifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase NP_891338.1 5113275 R 257310 CDS NP_891339.1 33603779 2659677 5115650..5117452 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0670; acyl-CoA dehydrogenase 5117452 2659677 BB4806 Bordetella bronchiseptica RB50 acyl-CoA dehydrogenase NP_891339.1 5115650 D 257310 CDS NP_891340.1 33603780 2659662 5117534..5118520 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0671; hypothetical protein 5118520 2659662 BB4807 Bordetella bronchiseptica RB50 hypothetical protein NP_891340.1 5117534 D 257310 CDS NP_891341.1 33603781 2661275 5118572..5120761 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0672; acetyl-CoA synthetase 5120761 2661275 BB4808 Bordetella bronchiseptica RB50 acetyl-CoA synthetase NP_891341.1 5118572 D 257310 CDS NP_891342.1 33603782 2661276 5120758..5121555 1 NC_002927.3 Catalyzes the first step in the citric acid cycle. Oxaloacetate and acetyl-CoA bind to citrate synthase, which then catalyzes the reaction which joins the two compounds together; citrate synthase 5121555 2661276 BB4809 Bordetella bronchiseptica RB50 citrate synthase NP_891342.1 5120758 D 257310 CDS NP_891343.1 33603783 2661277 5121552..5122388 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0674; transcriptional regulator 5122388 2661277 BB4810 Bordetella bronchiseptica RB50 transcriptional regulator NP_891343.1 5121552 D 257310 CDS NP_891344.1 33603784 2660355 5122408..5124783 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0675; molybdopterin oxidoreductase 5124783 2660355 BB4811 Bordetella bronchiseptica RB50 molybdopterin oxidoreductase NP_891344.1 5122408 D 257310 CDS NP_891345.1 33603785 2661851 complement(5124780..5125661) 1 NC_002927.3 hypothetical protein 5125661 2661851 BB4812 Bordetella bronchiseptica RB50 hypothetical protein NP_891345.1 5124780 R 257310 CDS NP_891346.1 33603786 2662667 complement(5125760..5126506) 1 NC_002927.3 AraC family transcriptional regulator 5126506 2662667 BB4813 Bordetella bronchiseptica RB50 AraC family transcriptional regulator NP_891346.1 5125760 R 257310 CDS NP_891347.1 33603787 2662673 complement(5126528..5127589) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3727; glycosyl transferase family protein 5127589 2662673 BB4814 Bordetella bronchiseptica RB50 glycosyl transferase family protein NP_891347.1 5126528 R 257310 CDS NP_891348.1 33603788 2662674 complement(5127586..5128908) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3728; UDP-glucose 6-dehydrogenase 5128908 rkpK 2662674 rkpK Bordetella bronchiseptica RB50 UDP-glucose 6-dehydrogenase NP_891348.1 5127586 R 257310 CDS NP_891349.1 33603789 2662679 complement(5129020..5130405) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3729; hypothetical protein 5130405 2662679 BB4816 Bordetella bronchiseptica RB50 hypothetical protein NP_891349.1 5129020 R 257310 CDS NP_891350.1 33603790 2662672 complement(5130402..5131775) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3730; UDP-N-acetylglucosamine synthesis bifunctional protein 5131775 glmU 2662672 glmU Bordetella bronchiseptica RB50 UDP-N-acetylglucosamine synthesis bifunctional protein NP_891350.1 5130402 R 257310 CDS NP_891351.1 33603791 2662662 complement(5131850..5132563) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3731; hypothetical protein 5132563 2662662 BB4818 Bordetella bronchiseptica RB50 hypothetical protein NP_891351.1 5131850 R 257310 CDS NP_891352.1 33603792 2662663 complement(5132778..5133422) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3732; hypothetical protein 5133422 2662663 BB4819 Bordetella bronchiseptica RB50 hypothetical protein NP_891352.1 5132778 R 257310 CDS NP_891353.1 33603793 2662670 5133550..5133771 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3733; hypothetical protein 5133771 2662670 BB4820 Bordetella bronchiseptica RB50 hypothetical protein NP_891353.1 5133550 D 257310 CDS NP_891354.1 33603794 2662671 complement(5133943..5134545) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3734; SCO1/SenC family protein 5134545 2662671 BB4821 Bordetella bronchiseptica RB50 SCO1/SenC family protein NP_891354.1 5133943 R 257310 CDS NP_891355.1 33603795 2662669 complement(5134565..5135458) 1 NC_002927.3 converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 5135458 2662669 BB4822 Bordetella bronchiseptica RB50 protoheme IX farnesyltransferase NP_891355.1 5134565 R 257310 CDS NP_891356.1 33603796 2662664 complement(5135469..5136500) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3736; cytochrome oxidase assembly protein 5136500 2662664 BB4823 Bordetella bronchiseptica RB50 cytochrome oxidase assembly protein NP_891356.1 5135469 R 257310 CDS NP_891357.1 33603797 2662644 complement(5136503..5137123) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3737; hypothetical protein 5137123 2662644 BB4824 Bordetella bronchiseptica RB50 hypothetical protein NP_891357.1 5136503 R 257310 CDS NP_891358.1 33603798 2662645 complement(5137149..5137871) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3738; hypothetical protein 5137871 2662645 BB4825 Bordetella bronchiseptica RB50 hypothetical protein NP_891358.1 5137149 R 257310 CDS NP_891359.1 33603799 2662646 5137956..5138156 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3739; hypothetical protein 5138156 2662646 BB4826 Bordetella bronchiseptica RB50 hypothetical protein NP_891359.1 5137956 D 257310 CDS NP_891360.1 33603800 2662647 complement(5138266..5139141) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3740; cytochrome c oxidase subunit III 5139141 coIII 2662647 coIII Bordetella bronchiseptica RB50 cytochrome c oxidase subunit III NP_891360.1 5138266 R 257310 CDS NP_891361.1 33603801 2662651 complement(5139178..5139402) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3741; hypothetical protein 5139402 2662651 BB4828 Bordetella bronchiseptica RB50 hypothetical protein NP_891361.1 5139178 R 257310 CDS NP_891362.1 33603802 2662652 complement(5139416..5139538) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3742; hypothetical protein 5139538 2662652 BB4829 Bordetella bronchiseptica RB50 hypothetical protein NP_891362.1 5139416 R 257310 CDS NP_891363.1 33603803 2662656 complement(5139573..5141180) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3743; cytochrome c oxidase polypeptide I 5141180 ctaD 2662656 ctaD Bordetella bronchiseptica RB50 cytochrome c oxidase polypeptide I NP_891363.1 5139573 R 257310 CDS NP_891364.1 33603804 2659799 complement(5141291..5142448) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3744; bifunctional protein 5142448 2659799 BB4831 Bordetella bronchiseptica RB50 bifunctional protein NP_891364.1 5141291 R 257310 CDS NP_891365.1 33603805 2661337 5142717..5143550 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3745; hypothetical protein 5143550 2661337 BB4832 Bordetella bronchiseptica RB50 hypothetical protein NP_891365.1 5142717 D 257310 CDS NP_891366.1 33603806 2661400 complement(5143696..5146239) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3746; sodium/hydrogen exchanger family protein 5146239 2661400 BB4833 Bordetella bronchiseptica RB50 sodium/hydrogen exchanger family protein NP_891366.1 5143696 R 257310 CDS NP_891367.1 33603807 2661482 5146417..5147229 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3747; hypothetical protein 5147229 2661482 BB4834 Bordetella bronchiseptica RB50 hypothetical protein NP_891367.1 5146417 D 257310 CDS NP_891368.1 33603808 2661504 complement(5147623..5148546) 1 NC_002927.3 binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; RNA polymerase factor sigma-32 5148546 rpoH 2661504 rpoH Bordetella bronchiseptica RB50 RNA polymerase factor sigma-32 NP_891368.1 5147623 R 257310 CDS NP_891369.1 33603809 2659487 complement(5148654..5149343) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3749; hypothetical protein 5149343 2659487 BB4836 Bordetella bronchiseptica RB50 hypothetical protein NP_891369.1 5148654 R 257310 CDS NP_891370.1 33603810 2659465 complement(5149404..5150252) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3750; esterase 5150252 2659465 BB4837 Bordetella bronchiseptica RB50 esterase NP_891370.1 5149404 R 257310 CDS NP_891371.1 33603811 2659466 complement(5150254..5151360) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3751; alcohol dehydrogenase class III 5151360 adhI 2659466 adhI Bordetella bronchiseptica RB50 alcohol dehydrogenase class III NP_891371.1 5150254 R 257310 CDS NP_891372.1 33603812 2659520 5151544..5152308 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3752; hypothetical protein 5152308 2659520 BB4839 Bordetella bronchiseptica RB50 hypothetical protein NP_891372.1 5151544 D 257310 CDS NP_891373.1 33603813 2659521 5152653..5157392 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3753; glutamate synthase [NADPH] large chain 5157392 gltB 2659521 gltB Bordetella bronchiseptica RB50 glutamate synthase [NADPH] large chain NP_891373.1 5152653 D 257310 CDS NP_891374.2 161609256 2659611 5157401..5158867 1 NC_002927.3 glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta 5158867 gltD 2659611 gltD Bordetella bronchiseptica RB50 glutamate synthase subunit beta NP_891374.2 5157401 D 257310 CDS NP_891375.1 33603815 2660555 5159159..5159797 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3755; outer membrane protein 5159797 2660555 BB4842 Bordetella bronchiseptica RB50 outer membrane protein NP_891375.1 5159159 D 257310 CDS NP_891376.1 33603816 2660556 5159879..5160862 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3756; hypothetical protein 5160862 2660556 BB4843 Bordetella bronchiseptica RB50 hypothetical protein NP_891376.1 5159879 D 257310 CDS NP_891377.1 33603817 2660634 5160957..5161853 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3757; ABC transporter ATP-binding protein 5161853 2660634 BB4844 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_891377.1 5160957 D 257310 CDS NP_891378.1 33603818 2660668 5161850..5162635 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3758; hypothetical protein 5162635 2660668 BB4845 Bordetella bronchiseptica RB50 hypothetical protein NP_891378.1 5161850 D 257310 CDS NP_891379.1 33603819 2661138 5162648..5163154 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3759; mce related protein 5163154 2661138 BB4846 Bordetella bronchiseptica RB50 mce related protein NP_891379.1 5162648 D 257310 CDS NP_891380.1 33603820 2660723 5163230..5164045 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3760; lipoprotein 5164045 2660723 BB4847 Bordetella bronchiseptica RB50 lipoprotein NP_891380.1 5163230 D 257310 CDS NP_891381.1 33603821 2660724 5164079..5164702 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3761; hypothetical protein 5164702 2660724 BB4848 Bordetella bronchiseptica RB50 hypothetical protein NP_891381.1 5164079 D 257310 CDS NP_891382.1 33603822 2661125 5164768..5165619 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3762; ABC transporter ATP-binding protein 5165619 2661125 BB4849 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_891382.1 5164768 D 257310 CDS NP_891383.1 33603823 2661126 5165616..5166431 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3764; ABC transporter 5166431 2661126 BB4850 Bordetella bronchiseptica RB50 ABC transporter NP_891383.1 5165616 D 257310 CDS NP_891384.1 33603824 2660958 5166431..5166682 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3765; BolA-like protein 5166682 2660958 BB4851 Bordetella bronchiseptica RB50 BolA-like protein NP_891384.1 5166431 D 257310 CDS NP_891385.1 33603825 2660990 5166682..5167950 1 NC_002927.3 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 5167950 murA 2660990 murA Bordetella bronchiseptica RB50 UDP-N-acetylglucosamine 1-carboxyvinyltransferase NP_891385.1 5166682 D 257310 CDS NP_891386.1 33603826 2660804 5167947..5168618 1 NC_002927.3 short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ; ATP phosphoribosyltransferase catalytic subunit 5168618 hisG 2660804 hisG Bordetella bronchiseptica RB50 ATP phosphoribosyltransferase catalytic subunit NP_891386.1 5167947 D 257310 CDS NP_891387.1 33603827 2659705 5168651..5169973 1 NC_002927.3 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 5169973 hisD 2659705 hisD Bordetella bronchiseptica RB50 histidinol dehydrogenase NP_891387.1 5168651 D 257310 CDS NP_891388.1 33603828 2659706 5169970..5171067 1 NC_002927.3 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 5171067 hisC 2659706 hisC Bordetella bronchiseptica RB50 histidinol-phosphate aminotransferase NP_891388.1 5169970 D 257310 CDS NP_891389.1 33603829 2659669 5171069..5171656 1 NC_002927.3 catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase 5171656 hisB 2659669 hisB Bordetella bronchiseptica RB50 imidazoleglycerol-phosphate dehydratase NP_891389.1 5171069 D 257310 CDS NP_891390.1 33603830 2661580 5171688..5172365 1 NC_002927.3 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 5172365 hisH 2661580 hisH Bordetella bronchiseptica RB50 imidazole glycerol phosphate synthase subunit HisH NP_891390.1 5171688 D 257310 CDS NP_891391.2 161609255 2661583 5172429..5173169 1 NC_002927.3 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 5173169 hisA 2661583 hisA Bordetella bronchiseptica RB50 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase NP_891391.2 5172429 D 257310 CDS NP_891392.1 33603832 2661584 5173166..5173975 1 NC_002927.3 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 5173975 hisF 2661584 hisF Bordetella bronchiseptica RB50 imidazole glycerol phosphate synthase subunit HisF NP_891392.1 5173166 D 257310 CDS NP_891393.1 33603833 2659534 5173972..5174376 1 NC_002927.3 PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers; phosphoribosyl-AMP cyclohydrolase 5174376 hisI 2659534 hisI Bordetella bronchiseptica RB50 phosphoribosyl-AMP cyclohydrolase NP_891393.1 5173972 D 257310 CDS NP_891394.1 33603834 2659535 5174373..5174720 1 NC_002927.3 catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis; phosphoribosyl-ATP pyrophosphatase 5174720 hisE 2659535 hisE Bordetella bronchiseptica RB50 phosphoribosyl-ATP pyrophosphatase NP_891394.1 5174373 D 257310 CDS NP_891395.1 33603835 2660027 5174735..5175103 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3776; MttA/Hcf106 family protein 5175103 2660027 BB4862 Bordetella bronchiseptica RB50 MttA/Hcf106 family protein NP_891395.1 5174735 D 257310 CDS NP_891396.1 33603836 2660402 5175119..5175346 1 NC_002927.3 TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin arginine translocase A 5175346 tatA 2660402 tatA Bordetella bronchiseptica RB50 twin arginine translocase A NP_891396.1 5175119 D 257310 CDS NP_891397.1 33603837 2660403 5175446..5175868 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3778; Sec-independent protein translocase 5175868 tatB 2660403 tatB Bordetella bronchiseptica RB50 Sec-independent protein translocase NP_891397.1 5175446 D 257310 CDS NP_891398.1 33603838 2660416 5175865..5176665 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3779; Sec-independent protein translocase 5176665 tatC 2660416 tatC Bordetella bronchiseptica RB50 Sec-independent protein translocase NP_891398.1 5175865 D 257310 CDS NP_891399.1 33603839 2660448 5176743..5177099 1 NC_002927.3 DNA-binding protein 5177099 2660448 BB4866 Bordetella bronchiseptica RB50 DNA-binding protein NP_891399.1 5176743 D 257310 CDS NP_891400.1 33603840 2660449 complement(5177110..5178225) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0280; protease 5178225 degQ 2660449 degQ Bordetella bronchiseptica RB50 protease NP_891400.1 5177110 R 257310 CDS NP_891401.1 33603841 2660656 5178279..5179055 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0279; hypothetical protein 5179055 2660656 BB4868 Bordetella bronchiseptica RB50 hypothetical protein NP_891401.1 5178279 D 257310 CDS NP_891402.1 33603842 2660712 complement(5179080..5179538) 1 NC_002927.3 homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel 5179538 mscL 2660712 mscL Bordetella bronchiseptica RB50 large-conductance mechanosensitive channel NP_891402.1 5179080 R 257310 CDS NP_891403.1 33603843 2660713 5179678..5180319 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0277; ubiquinol-cytochrome C reductase iron-sulfur subunit 5180319 petA 2660713 petA Bordetella bronchiseptica RB50 ubiquinol-cytochrome C reductase iron-sulfur subunit NP_891403.1 5179678 D 257310 CDS NP_891404.1 33603844 2661040 5180384..5181766 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0276; cytochrome B 5181766 petB 2661040 petB Bordetella bronchiseptica RB50 cytochrome B NP_891404.1 5180384 D 257310 CDS NP_891405.1 33603845 2659983 5181786..5182640 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0275; cytochrome C1 precursor 5182640 petC 2659983 petC Bordetella bronchiseptica RB50 cytochrome C1 precursor NP_891405.1 5181786 D 257310 CDS NP_891406.1 33603846 2662079 5182799..5183410 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0274; stringent starvation protein A 5183410 sspA 2662079 sspA Bordetella bronchiseptica RB50 stringent starvation protein A NP_891406.1 5182799 D 257310 CDS NP_891407.1 33603847 2662080 5183420..5183869 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0273; ClpXP protease specificity-enhancing factor 5183869 sspB 2662080 sspB Bordetella bronchiseptica RB50 ClpXP protease specificity-enhancing factor NP_891407.1 5183420 D 257310 CDS NP_891408.1 33603848 2662156 complement(5184074..5184388) 1 NC_002927.3 hypothetical protein 5184388 2662156 BB4875 Bordetella bronchiseptica RB50 hypothetical protein NP_891408.1 5184074 R 257310 CDS NP_891409.1 33603849 2662157 complement(5184444..5185427) 1 NC_002927.3 hypothetical protein 5185427 2662157 BB4876 Bordetella bronchiseptica RB50 hypothetical protein NP_891409.1 5184444 R 257310 CDS NP_891410.1 33603850 2659013 complement(5185464..5186414) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP2856; hypothetical protein 5186414 2659013 BB4877 Bordetella bronchiseptica RB50 hypothetical protein NP_891410.1 5185464 R 257310 CDS NP_891411.1 33603851 2659014 complement(5186433..5187314) 1 NC_002927.3 hydrolase 5187314 2659014 BB4878 Bordetella bronchiseptica RB50 hydrolase NP_891411.1 5186433 R 257310 CDS NP_891412.1 33603852 2659015 5187403..5188326 1 NC_002927.3 LysR family transcriptional regulator 5188326 2659015 BB4879 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_891412.1 5187403 D 257310 CDS NP_891413.1 33603853 2659149 complement(5188332..5189372) 1 NC_002927.3 thioredoxin reductase 5189372 trxB 2659149 trxB Bordetella bronchiseptica RB50 thioredoxin reductase NP_891413.1 5188332 R 257310 CDS NP_891414.1 33603854 2659625 5189590..5190399 1 NC_002927.3 IclR family transcriptional regulator 5190399 2659625 BB4881 Bordetella bronchiseptica RB50 IclR family transcriptional regulator NP_891414.1 5189590 D 257310 CDS NP_891415.1 33603855 2659752 5190467..5192149 1 NC_002927.3 hypothetical protein 5192149 2659752 BB4882 Bordetella bronchiseptica RB50 hypothetical protein NP_891415.1 5190467 D 257310 CDS NP_891416.1 33603856 2661246 5192146..5192790 1 NC_002927.3 hypothetical protein 5192790 2661246 BB4883 Bordetella bronchiseptica RB50 hypothetical protein NP_891416.1 5192146 D 257310 CDS NP_891417.1 33603857 2661247 5192787..5194007 1 NC_002927.3 dehydratase/racemase 5194007 2661247 BB4884 Bordetella bronchiseptica RB50 dehydratase/racemase NP_891417.1 5192787 D 257310 CDS NP_891418.1 33603858 2662060 5194030..5195025 1 NC_002927.3 lipoprotein 5195025 2662060 BB4885 Bordetella bronchiseptica RB50 lipoprotein NP_891418.1 5194030 D 257310 CDS NP_891419.1 33603859 2662061 complement(5195098..5196303) 1 NC_002927.3 dehydratase/racemase 5196303 2662061 BB4886 Bordetella bronchiseptica RB50 dehydratase/racemase NP_891419.1 5195098 R 257310 CDS NP_891420.1 33603860 2661256 complement(5196300..5196548) 1 NC_002927.3 glutaredoxin 5196548 2661256 BB4887 Bordetella bronchiseptica RB50 glutaredoxin NP_891420.1 5196300 R 257310 CDS NP_891421.1 33603861 2661257 complement(5196545..5197462) 1 NC_002927.3 reductase 5197462 2661257 BB4888 Bordetella bronchiseptica RB50 reductase NP_891421.1 5196545 R 257310 CDS NP_891422.1 33603862 2661258 5197719..5198696 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3782; hypothetical protein 5198696 2661258 BB4889 Bordetella bronchiseptica RB50 hypothetical protein NP_891422.1 5197719 D 257310 CDS NP_891423.1 33603863 2662068 5198963..5199772 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3783; toxin subunit 1 5199772 ptxA 2662068 ptxA Bordetella bronchiseptica RB50 toxin subunit 1 NP_891423.1 5198963 D 257310 CDS NP_891424.1 33603864 2662069 5199812..5200492 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3784; toxin subunit 2 5200492 ptxB 2662069 ptxB Bordetella bronchiseptica RB50 toxin subunit 2 NP_891424.1 5199812 D 257310 CDS NP_891425.1 33603865 2662001 5200486..5200944 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3785; toxin subunit 4 5200944 ptxD 2662001 ptxD Bordetella bronchiseptica RB50 toxin subunit 4 NP_891425.1 5200486 D 257310 CDS NP_891426.1 33603866 2663360 5200956..5201318 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3786; toxin subunit 5 5201318 ptxE 2663360 ptxE Bordetella bronchiseptica RB50 toxin subunit 5 NP_891426.1 5200956 D 257310 CDS NP_891427.1 33603867 2663361 5201401..5202084 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3787; toxin subunit 3 5202084 ptxC 2663361 ptxC Bordetella bronchiseptica RB50 toxin subunit 3 NP_891427.1 5201401 D 257310 CDS NP_891428.1 33603868 2663871 5202140..5202448 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3788; toxin transport protein 5202448 ptlA 2663871 ptlA Bordetella bronchiseptica RB50 toxin transport protein NP_891428.1 5202140 D 257310 CDS NP_891429.1 33603869 2663872 5202467..5202781 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3789; toxin transport protein 5202781 ptlB 2663872 ptlB Bordetella bronchiseptica RB50 toxin transport protein NP_891429.1 5202467 D 257310 CDS NP_891430.1 33603870 2659886 5202778..5205252 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3790; secretion system protein 5205252 2659886 BB4897 Bordetella bronchiseptica RB50 secretion system protein NP_891430.1 5202778 D 257310 CDS NP_891431.1 33603871 2661380 5205260..5206645 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3791; hypothetical protein 5206645 2661380 BB4898 Bordetella bronchiseptica RB50 hypothetical protein NP_891431.1 5205260 D 257310 CDS NP_891432.1 33603872 2661381 5206642..5206827 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3792; secretion system protein 5206827 2661381 BB4898A Bordetella bronchiseptica RB50 secretion system protein NP_891432.1 5206642 D 257310 CDS NP_891433.1 33603873 2661338 5206806..5207507 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3793; secretion system protein 5207507 2661338 BB4899 Bordetella bronchiseptica RB50 secretion system protein NP_891433.1 5206806 D 257310 CDS NP_891434.1 33603874 2661339 5207504..5208325 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3794; secretion system protein 5208325 2661339 BB4900 Bordetella bronchiseptica RB50 secretion system protein NP_891434.1 5207504 D 257310 CDS NP_891435.1 33603875 2661610 5208306..5209430 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3795; secretion system protein 5209430 2661610 BB4901 Bordetella bronchiseptica RB50 secretion system protein NP_891435.1 5208306 D 257310 CDS NP_891436.1 33603876 2661611 5209423..5210442 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3796; secretion system protein 5210442 2661611 BB4902 Bordetella bronchiseptica RB50 secretion system protein NP_891436.1 5209423 D 257310 CDS NP_891437.1 33603877 2659508 complement(5210648..5211682) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3797; hypothetical protein 5211682 2659508 BB4903 Bordetella bronchiseptica RB50 hypothetical protein NP_891437.1 5210648 R 257310 CDS NP_891438.1 33603878 2659558 5211783..5212574 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3798; AraC family transcriptional regulator 5212574 2659558 BB4904 Bordetella bronchiseptica RB50 AraC family transcriptional regulator NP_891438.1 5211783 D 257310 CDS NP_891439.1 33603879 2660406 5212657..5213031 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3799; hypothetical protein 5213031 2660406 BB4905 Bordetella bronchiseptica RB50 hypothetical protein NP_891439.1 5212657 D 257310 CDS NP_891440.1 33603880 2660457 5213009..5214418 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3800; hypothetical protein 5214418 2660457 BB4906 Bordetella bronchiseptica RB50 hypothetical protein NP_891440.1 5213009 D 257310 CDS NP_891441.1 33603881 2660458 5214411..5215793 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3801; hypothetical protein 5215793 2660458 BB4907 Bordetella bronchiseptica RB50 hypothetical protein NP_891441.1 5214411 D 257310 CDS NP_891442.1 33603882 2660506 5216128..5217732 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3802; peptide ABC transporter substrate-binding protein 5217732 2660506 BB4908 Bordetella bronchiseptica RB50 peptide ABC transporter substrate-binding protein NP_891442.1 5216128 D 257310 CDS NP_891443.1 33603883 2661081 5217768..5218781 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3803; transport system permease 5218781 2661081 BB4909 Bordetella bronchiseptica RB50 transport system permease NP_891443.1 5217768 D 257310 CDS NP_891444.1 33603884 2661131 5218792..5219718 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3804; transport system permease 5219718 2661131 BB4910 Bordetella bronchiseptica RB50 transport system permease NP_891444.1 5218792 D 257310 CDS NP_891445.1 33603885 2661041 5219726..5221447 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3805+BP0167; ABC transporter ATP-binding protein 5221447 2661041 BB4911 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_891445.1 5219726 D 257310 CDS NP_891446.1 33603886 2659691 complement(5221454..5222368) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0168; hypothetical protein 5222368 2659691 BB4912 Bordetella bronchiseptica RB50 hypothetical protein NP_891446.1 5221454 R 257310 CDS NP_891447.1 33603887 2659692 complement(5222346..5222975) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0169; hypothetical protein 5222975 2659692 BB4913 Bordetella bronchiseptica RB50 hypothetical protein NP_891447.1 5222346 R 257310 CDS NP_891448.1 33603888 2659146 5223306..5224751 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0170; ATP-dependent RNA helicase 5224751 rhlE 2659146 rhlE Bordetella bronchiseptica RB50 ATP-dependent RNA helicase NP_891448.1 5223306 D 257310 CDS NP_891449.1 33603889 2659748 5224785..5225414 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0171; LysE family efflux protein 5225414 2659748 BB4915 Bordetella bronchiseptica RB50 LysE family efflux protein NP_891449.1 5224785 D 257310 CDS NP_891450.1 33603890 2661954 5225463..5227070 1 NC_002927.3 stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein; peptide chain release factor 3 5227070 prfC 2661954 prfC Bordetella bronchiseptica RB50 peptide chain release factor 3 NP_891450.1 5225463 D 257310 CDS NP_891451.1 33603891 2661309 5227095..5227778 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0173; hypothetical protein 5227778 2661309 BB4917 Bordetella bronchiseptica RB50 hypothetical protein NP_891451.1 5227095 D 257310 CDS NP_891452.1 33603892 2659727 complement(5227860..5228336) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0174; bacterioferritin 5228336 bfr 2659727 bfr Bordetella bronchiseptica RB50 bacterioferritin NP_891452.1 5227860 R 257310 CDS NP_891453.1 33603893 2659728 complement(5228675..5229604) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0136; integral membrane protein 5229604 2659728 BB4919 Bordetella bronchiseptica RB50 integral membrane protein NP_891453.1 5228675 R 257310 CDS NP_891454.1 33603894 2659904 5229712..5230590 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0135; LysR family transcriptional regulator 5230590 2659904 BB4920 Bordetella bronchiseptica RB50 LysR family transcriptional regulator NP_891454.1 5229712 D 257310 CDS NP_891455.1 33603895 2659923 complement(5230618..5230920) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0134; bacterioferritin-associated ferredoxin 5230920 2659923 BB4921 Bordetella bronchiseptica RB50 bacterioferritin-associated ferredoxin NP_891455.1 5230618 R 257310 CDS NP_891456.1 33603896 2659924 complement(5231013..5232452) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0133; RNA polymerase sigma-54 factor 5232452 rpoN 2659924 rpoN Bordetella bronchiseptica RB50 RNA polymerase sigma-54 factor NP_891456.1 5231013 R 257310 CDS NP_891457.1 33603897 2661398 5232451..5233098 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0132; hypothetical protein 5233098 2661398 BB4923 Bordetella bronchiseptica RB50 hypothetical protein NP_891457.1 5232451 D 257310 CDS NP_891458.1 33603898 2661399 5233525..5235231 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0131; 2-isopropylmalate synthase 5235231 leuA 2661399 leuA Bordetella bronchiseptica RB50 2-isopropylmalate synthase NP_891458.1 5233525 D 257310 CDS NP_891459.1 33603899 2659450 complement(5235372..5236655) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0130; amidase 5236655 2659450 BB4925 Bordetella bronchiseptica RB50 amidase NP_891459.1 5235372 R 257310 CDS NP_891460.1 33603900 2659480 5236923..5237960 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0129; LacI family transcriptional regulator 5237960 2659480 BB4926 Bordetella bronchiseptica RB50 LacI family transcriptional regulator NP_891460.1 5236923 D 257310 CDS NP_891461.1 33603901 2659566 5237957..5238967 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0128; iron ABC transporter substrate-binding protein 5238967 2659566 BB4927 Bordetella bronchiseptica RB50 iron ABC transporter substrate-binding protein NP_891461.1 5237957 D 257310 CDS NP_891462.1 33603902 2659567 5238969..5239784 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0127; binding-protein-dependent transport system, permease 5239784 2659567 BB4928 Bordetella bronchiseptica RB50 binding-protein-dependent transport system, permease NP_891462.1 5238969 D 257310 CDS NP_891463.1 33603903 2660753 5239796..5240629 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0126; ABC transporter permease 5240629 2660753 BB4929 Bordetella bronchiseptica RB50 ABC transporter permease NP_891463.1 5239796 D 257310 CDS NP_891464.1 33603904 2660719 5240626..5241609 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0125; ABC transporter ATP-binding protein 5241609 2660719 BB4930 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_891464.1 5240626 D 257310 CDS NP_891465.1 33603905 2660797 5241632..5242453 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0123; cAMP phosphodiesterase 5242453 2660797 BB4931 Bordetella bronchiseptica RB50 cAMP phosphodiesterase NP_891465.1 5241632 D 257310 CDS NP_891466.1 33603906 2660798 5242559..5243599 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0122; sugar ABC transporter ATP-binding protein 5243599 2660798 BB4932 Bordetella bronchiseptica RB50 sugar ABC transporter ATP-binding protein NP_891466.1 5242559 D 257310 CDS NP_891467.1 33603907 2660865 5243642..5244934 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0121; glycerol-3-phosphate ABC transporter substrate-binding protein 5244934 2660865 BB4933 Bordetella bronchiseptica RB50 glycerol-3-phosphate ABC transporter substrate-binding protein NP_891467.1 5243642 D 257310 CDS NP_891468.1 33603908 2661132 5244945..5245820 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0120; inner membrane component of binding-protein-dependent transport system 5245820 2661132 BB4934 Bordetella bronchiseptica RB50 inner membrane component of binding-protein-dependent transport system NP_891468.1 5244945 D 257310 CDS NP_891469.1 33603909 2660374 5245817..5246617 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0119; inner membrane component of binding-protein-dependent transport system 5246617 2660374 BB4935 Bordetella bronchiseptica RB50 inner membrane component of binding-protein-dependent transport system NP_891469.1 5245817 D 257310 CDS NP_891470.1 33603910 2659198 complement(5246777..5247094) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0117; hypothetical protein 5247094 2659198 BB4936 Bordetella bronchiseptica RB50 hypothetical protein NP_891470.1 5246777 R 257310 CDS NP_891471.1 33603911 2659199 complement(5247185..5247532) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0116; hypothetical protein 5247532 2659199 BB4937 Bordetella bronchiseptica RB50 hypothetical protein NP_891471.1 5247185 R 257310 CDS NP_891472.1 33603912 2661661 5247820..5249505 1 NC_002927.3 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 5249505 argS 2661661 argS Bordetella bronchiseptica RB50 arginyl-tRNA synthetase NP_891472.1 5247820 D 257310 CDS NP_891473.1 33603913 2659400 5249515..5250198 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0114; hypothetical protein 5250198 2659400 BB4939 Bordetella bronchiseptica RB50 hypothetical protein NP_891473.1 5249515 D 257310 CDS NP_891474.1 33603914 2659401 5250260..5250889 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0113; thiol:disulfide interchange protein DsbA precursor 5250889 dsbA 2659401 dsbA Bordetella bronchiseptica RB50 thiol:disulfide interchange protein DsbA precursor NP_891474.1 5250260 D 257310 CDS NP_891475.1 33603915 2661278 complement(5250971..5252164) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0112; cystathionine beta-lyase 5252164 metC 2661278 metC Bordetella bronchiseptica RB50 cystathionine beta-lyase NP_891475.1 5250971 R 257310 CDS NP_891476.1 33603916 2661279 5252218..5252964 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0111; hypothetical protein 5252964 2661279 BB4942 Bordetella bronchiseptica RB50 hypothetical protein NP_891476.1 5252218 D 257310 CDS NP_891477.1 33603917 2662677 complement(5252988..5254046) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0442; metallo-beta-lactamase family protein 5254046 2662677 BB4943 Bordetella bronchiseptica RB50 metallo-beta-lactamase family protein NP_891477.1 5252988 R 257310 CDS NP_891478.1 33603918 2662678 5254121..5254495 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0441; MerR family transcriptional regulator 5254495 2662678 BB4944 Bordetella bronchiseptica RB50 MerR family transcriptional regulator NP_891478.1 5254121 D 257310 CDS NP_891479.1 33603919 2661822 5254703..5255881 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0440+BP0444; isovaleryl-CoA dehydrogenase 5255881 ivd 2661822 ivd Bordetella bronchiseptica RB50 isovaleryl-CoA dehydrogenase NP_891479.1 5254703 D 257310 CDS NP_891480.1 33603920 2659899 5255920..5257779 1 NC_002927.3 catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity; unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol; bifunctional isocitrate dehydrogenase kinase/phosphatase 5257779 aceK 2659899 aceK Bordetella bronchiseptica RB50 bifunctional isocitrate dehydrogenase kinase/phosphatase NP_891480.1 5255920 D 257310 CDS NP_891481.1 33603921 2659957 5257814..5258995 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0447; acetyl-CoA acetyltransferase 5258995 2659957 BB4947 Bordetella bronchiseptica RB50 acetyl-CoA acetyltransferase NP_891481.1 5257814 D 257310 CDS NP_891482.1 33603922 2661546 5259096..5260703 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0448; carboxyltransferase subunit of acetyl-CoA carboxylase 5260703 accB 2661546 accB Bordetella bronchiseptica RB50 carboxyltransferase subunit of acetyl-CoA carboxylase NP_891482.1 5259096 D 257310 CDS NP_891483.1 33603923 2661547 5260750..5262771 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0449; biotin carboxylase 5262771 accA 2661547 accA Bordetella bronchiseptica RB50 biotin carboxylase NP_891483.1 5260750 D 257310 CDS NP_891484.1 33603924 2661596 complement(5262805..5263050) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0450; hypothetical protein 5263050 2661596 BB4950 Bordetella bronchiseptica RB50 hypothetical protein NP_891484.1 5262805 R 257310 CDS NP_891485.1 33603925 2661599 complement(5263064..5264254) 1 NC_002927.3 DapATase; functions in arginine biosynthetic pathway; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine transaminase 5264254 argD 2661599 argD Bordetella bronchiseptica RB50 acetylornithine transaminase NP_891485.1 5263064 R 257310 CDS NP_891486.1 33603926 2661600 5264450..5265415 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0452; hypothetical protein 5265415 2661600 BB4952 Bordetella bronchiseptica RB50 hypothetical protein NP_891486.1 5264450 D 257310 CDS NP_891487.1 33603927 2659528 complement(5265438..5266451) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0453; low-specificity D-threonine aldolase 5266451 2659528 BB4953 Bordetella bronchiseptica RB50 low-specificity D-threonine aldolase NP_891487.1 5265438 R 257310 CDS NP_891488.1 33603928 2659529 5266783..5267745 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0454; hypothetical protein 5267745 2659529 BB4954 Bordetella bronchiseptica RB50 hypothetical protein NP_891488.1 5266783 D 257310 CDS NP_891489.1 33603929 2659549 5267869..5269893 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0455; hypothetical protein 5269893 2659549 BB4955 Bordetella bronchiseptica RB50 hypothetical protein NP_891489.1 5267869 D 257310 CDS NP_891490.1 33603930 2659550 5270090..5272333 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0456; heme receptor 5272333 hemC 2659550 hemC Bordetella bronchiseptica RB50 heme receptor NP_891490.1 5270090 D 257310 CDS NP_891491.1 33603931 2660542 5272612..5273070 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0457; hypothetical protein 5273070 2660542 BB4957 Bordetella bronchiseptica RB50 hypothetical protein NP_891491.1 5272612 D 257310 CDS NP_891492.1 33603932 2661110 5273087..5274046 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0458; aminoacyl-tRNA synthetase 5274046 2661110 BB4958 Bordetella bronchiseptica RB50 aminoacyl-tRNA synthetase NP_891492.1 5273087 D 257310 CDS NP_891493.1 33603933 2661111 complement(5274033..5276654) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0459; hypothetical protein 5276654 2661111 BB4959 Bordetella bronchiseptica RB50 hypothetical protein NP_891493.1 5274033 R 257310 CDS NP_891494.1 33603934 2660796 5276718..5279345 1 NC_002927.3 decatenates replicating daughter chromosomes; DNA topoisomerase III 5279345 topB 2660796 topB Bordetella bronchiseptica RB50 DNA topoisomerase III NP_891494.1 5276718 D 257310 CDS NP_891495.1 33603935 2661035 5279496..5280560 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0461; hypothetical protein 5280560 2661035 BB4961 Bordetella bronchiseptica RB50 hypothetical protein NP_891495.1 5279496 D 257310 CDS NP_891496.1 33603936 2661036 5280557..5281330 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0462; ABC transporter ATP-binding protein 5281330 2661036 BB4962 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_891496.1 5280557 D 257310 CDS NP_891497.1 33603937 2661025 5281339..5282196 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0463; ABC transporter permease 5282196 2661025 BB4963 Bordetella bronchiseptica RB50 ABC transporter permease NP_891497.1 5281339 D 257310 CDS NP_891498.1 33603938 2660970 5282209..5282988 1 NC_002927.3 Involved in the nonphosphorylative, ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate; gluconate 5-dehydrogenase 5282988 idnO 2660970 idnO Bordetella bronchiseptica RB50 gluconate 5-dehydrogenase NP_891498.1 5282209 D 257310 CDS NP_891499.1 33603939 2660301 5283023..5284495 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0465; aldehyde dehydrogenase 5284495 2660301 BB4965 Bordetella bronchiseptica RB50 aldehyde dehydrogenase NP_891499.1 5283023 D 257310 CDS NP_891500.1 33603940 2660622 5284523..5285281 1 NC_002927.3 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 5285281 fabG 2660622 fabG Bordetella bronchiseptica RB50 3-ketoacyl-ACP reductase NP_891500.1 5284523 D 257310 CDS NP_891501.1 33603941 2660048 complement(5285424..5287274) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0467; acetolactate synthase large subunit 5287274 2660048 BB4967 Bordetella bronchiseptica RB50 acetolactate synthase large subunit NP_891501.1 5285424 R 257310 CDS NP_891502.1 33603942 2659397 5287368..5287844 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0468; transcription regulator AsnC 5287844 2659397 BB4968 Bordetella bronchiseptica RB50 transcription regulator AsnC NP_891502.1 5287368 D 257310 CDS NP_891503.1 33603943 2663943 complement(5287861..5288781) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0469; hypothetical protein 5288781 2663943 BB4969 Bordetella bronchiseptica RB50 hypothetical protein NP_891503.1 5287861 R 257310 CDS NP_891504.1 33603944 2663944 5288888..5289388 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0470; hypothetical protein 5289388 2663944 BB4970 Bordetella bronchiseptica RB50 hypothetical protein NP_891504.1 5288888 D 257310 CDS NP_891505.1 33603945 2663923 5289762..5290454 1 NC_002927.3 DHBP synthase; functions during riboflavin biosynthesis; 3,4-dihydroxy-2-butanone 4-phosphate synthase 5290454 ribB 2663923 ribB Bordetella bronchiseptica RB50 3,4-dihydroxy-2-butanone 4-phosphate synthase NP_891505.1 5289762 D 257310 CDS NP_891506.1 33603946 2660055 complement(5290468..5290983) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0472; hypothetical protein 5290983 2660055 BB4972 Bordetella bronchiseptica RB50 hypothetical protein NP_891506.1 5290468 R 257310 CDS NP_891507.1 33603947 2660056 complement(5291041..5291565) 1 NC_002927.3 hypothetical protein 5291565 2660056 BB4973 Bordetella bronchiseptica RB50 hypothetical protein NP_891507.1 5291041 R 257310 CDS NP_891508.1 33603948 2662903 complement(5291582..5292193) 1 NC_002927.3 hypothetical protein 5292193 2662903 BB4974 Bordetella bronchiseptica RB50 hypothetical protein NP_891508.1 5291582 R 257310 CDS NP_891509.1 33603949 2662904 complement(5292307..5293236) 1 NC_002927.3 ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis; 2-dehydropantoate 2-reductase 5293236 2662904 BB4975 Bordetella bronchiseptica RB50 2-dehydropantoate 2-reductase NP_891509.1 5292307 R 257310 CDS NP_891510.1 33603950 2662905 complement(5293283..5294266) 1 NC_002927.3 integral-membrane protein 5294266 2662905 BB4976 Bordetella bronchiseptica RB50 integral-membrane protein NP_891510.1 5293283 R 257310 CDS NP_891511.1 33603951 2663481 complement(5294348..5294785) 1 NC_002927.3 hypothetical protein 5294785 2663481 BB4977 Bordetella bronchiseptica RB50 hypothetical protein NP_891511.1 5294348 R 257310 CDS NP_891512.1 33603952 2659807 complement(5294806..5296605) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0482; hypothetical protein 5296605 2659807 BB4978 Bordetella bronchiseptica RB50 hypothetical protein NP_891512.1 5294806 R 257310 CDS NP_891513.1 33603953 2659808 complement(5296639..5297484) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0483; AraC family transcriptional regulator 5297484 2659808 BB4979 Bordetella bronchiseptica RB50 AraC family transcriptional regulator NP_891513.1 5296639 R 257310 CDS NP_891514.1 33603954 2659870 complement(5297572..5298735) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0484; L-lactate dehydrogenase 5298735 lldD 2659870 lldD Bordetella bronchiseptica RB50 L-lactate dehydrogenase NP_891514.1 5297572 R 257310 CDS NP_891515.1 33603955 2661391 5298890..5299174 1 NC_002927.3 catalyzes the hydrolysis of acylphosphate; acylphosphatase 5299174 2661391 BB4981 Bordetella bronchiseptica RB50 acylphosphatase NP_891515.1 5298890 D 257310 CDS NP_891516.1 33603956 2659518 complement(5299188..5300159) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0486; hypothetical protein 5300159 2659518 BB4982 Bordetella bronchiseptica RB50 hypothetical protein NP_891516.1 5299188 R 257310 CDS NP_891517.1 33603957 2659519 complement(5300198..5301625) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0487; amidase 5301625 2659519 BB4983 Bordetella bronchiseptica RB50 amidase NP_891517.1 5300198 R 257310 CDS NP_891518.1 33603958 2659461 5301745..5302536 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0488; transcriptional regulator 5302536 2659461 BB4984 Bordetella bronchiseptica RB50 transcriptional regulator NP_891518.1 5301745 D 257310 CDS NP_891519.1 33603959 2660450 complement(5302552..5304960) 1 NC_002927.3 no significant database matches; hypothetical protein 5304960 2660450 BB4985 Bordetella bronchiseptica RB50 hypothetical protein NP_891519.1 5302552 R 257310 CDS NP_891520.1 33603960 2660467 complement(5305008..5306240) 1 NC_002927.3 no significant database matches; hypothetical protein 5306240 2660467 BB4986 Bordetella bronchiseptica RB50 hypothetical protein NP_891520.1 5305008 R 257310 CDS NP_891521.1 33603961 2659578 complement(5306465..5308918) 1 NC_002927.3 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 5308918 gyrB 2659578 gyrB Bordetella bronchiseptica RB50 DNA gyrase subunit B NP_891521.1 5306465 R 257310 CDS NP_891522.1 33603962 2660536 complement(5309013..5310128) 1 NC_002927.3 binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 5310128 dnaN 2660536 dnaN Bordetella bronchiseptica RB50 DNA polymerase III subunit beta NP_891522.1 5309013 R 257310 CDS NP_891523.1 33603963 2660568 complement(5310125..5311567) 1 NC_002927.3 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 5311567 dnaA 2660568 dnaA Bordetella bronchiseptica RB50 chromosomal replication initiation protein NP_891523.1 5310125 R 257310 CDS NP_891524.1 33603964 2660643 5311973..5312107 1 NC_002927.3 in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 5312107 rpmH 2660643 rpmH Bordetella bronchiseptica RB50 50S ribosomal protein L34 NP_891524.1 5311973 D 257310 CDS NP_891525.1 33603965 2660873 5312203..5312574 1 NC_002927.3 protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P 5312574 rnpA 2660873 rnpA Bordetella bronchiseptica RB50 ribonuclease P NP_891525.1 5312203 D 257310 CDS NP_891526.1 33603966 2660874 5312571..5312843 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP0494; hypothetical protein 5312843 2660874 BB4992 Bordetella bronchiseptica RB50 hypothetical protein NP_891526.1 5312571 D 257310 CDS NP_891527.2 161609254 2660878 5312892..5314583 1 NC_002927.3 functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; inner membrane protein translocase YidC 5314583 2660878 BB4993 Bordetella bronchiseptica RB50 inner membrane protein translocase YidC NP_891527.2 5312892 D 257310 CDS NP_891528.1 33603968 2660946 5314847..5316286 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3852; catalase 5316286 katA 2660946 katA Bordetella bronchiseptica RB50 catalase NP_891528.1 5314847 D 257310 CDS NP_891529.1 33603969 2661086 complement(5316347..5317228) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3853; ABC transporter permease 5317228 2661086 BB4995 Bordetella bronchiseptica RB50 ABC transporter permease NP_891529.1 5316347 R 257310 CDS NP_891530.1 33603970 2661032 complement(5317225..5318040) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3854; ABC transporter ATP-binding protein 5318040 2661032 BB4996 Bordetella bronchiseptica RB50 ABC transporter ATP-binding protein NP_891530.1 5317225 R 257310 CDS NP_891531.1 33603971 2661012 complement(5318042..5319085) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3855; nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein 5319085 2661012 BB4997 Bordetella bronchiseptica RB50 nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein NP_891531.1 5318042 R 257310 CDS NP_891532.1 33603972 2661013 complement(5319129..5320052) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3856; taurine catabolism dioxygenase 5320052 2661013 BB4998 Bordetella bronchiseptica RB50 taurine catabolism dioxygenase NP_891532.1 5319129 R 257310 CDS NP_891533.1 33603973 2659341 complement(5320182..5321381) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3857; hydrolase 5321381 2659341 BB4999 Bordetella bronchiseptica RB50 hydrolase NP_891533.1 5320182 R 257310 CDS NP_891534.1 33603974 2659342 complement(5321439..5322455) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3858; transport ATP-binding protein 5322455 2659342 BB5000 Bordetella bronchiseptica RB50 transport ATP-binding protein NP_891534.1 5321439 R 257310 CDS NP_891535.1 33603975 2659115 complement(5322452..5323453) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3859; transport system ATP-binding protein 5323453 2659115 BB5001 Bordetella bronchiseptica RB50 transport system ATP-binding protein NP_891535.1 5322452 R 257310 CDS NP_891536.1 33603976 2662114 complement(5323480..5324400) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3860; transport system permease 5324400 2662114 BB5002 Bordetella bronchiseptica RB50 transport system permease NP_891536.1 5323480 R 257310 CDS NP_891537.1 33603977 2659136 complement(5324397..5325371) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3861; transport system permease 5325371 2659136 BB5003 Bordetella bronchiseptica RB50 transport system permease NP_891537.1 5324397 R 257310 CDS NP_891538.1 33603978 2662213 complement(5325391..5326977) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3862; peptide ABC transporter substrate-binding protein 5326977 2662213 BB5004 Bordetella bronchiseptica RB50 peptide ABC transporter substrate-binding protein NP_891538.1 5325391 R 257310 CDS NP_891539.1 33603979 2659001 5327094..5328446 1 NC_002927.3 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 5328446 trmE 2659001 trmE Bordetella bronchiseptica RB50 tRNA modification GTPase TrmE NP_891539.1 5327094 D 257310 CDS NP_891540.1 33603980 2662129 complement(5328391..5329665) 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3864; hypothetical protein 5329665 2662129 BB5006 Bordetella bronchiseptica RB50 hypothetical protein NP_891540.1 5328391 R 257310 CDS NP_891541.1 33603981 2659624 5330223..5330903 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3865; response regulator protein 5330903 2659624 BB5007 Bordetella bronchiseptica RB50 response regulator protein NP_891541.1 5330223 D 257310 CDS NP_891542.1 33603982 2661996 5330938..5332353 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3866; sensor kinase 5332353 2661996 BB5008 Bordetella bronchiseptica RB50 sensor kinase NP_891542.1 5330938 D 257310 CDS NP_891543.1 33603983 2659217 5332474..5333478 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3867; hypothetical protein 5333478 2659217 BB5009 Bordetella bronchiseptica RB50 hypothetical protein NP_891543.1 5332474 D 257310 CDS NP_891544.1 33603984 2659697 5333583..5334020 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3868; hypothetical protein 5334020 2659697 BB5010 Bordetella bronchiseptica RB50 hypothetical protein NP_891544.1 5333583 D 257310 CDS NP_891545.1 33603985 2659698 5334017..5335540 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3869; hypothetical protein 5335540 2659698 BB5011 Bordetella bronchiseptica RB50 hypothetical protein NP_891545.1 5334017 D 257310 CDS NP_891546.1 33603986 2661364 complement(5335616..5336809) 1 NC_002927.3 catalyzes the transfer of an amino moiety; aminotransferase 5336809 2661364 BB5012 Bordetella bronchiseptica RB50 aminotransferase NP_891546.1 5335616 R 257310 CDS NP_891547.1 33603987 2661365 5337182..5337388 1 NC_002927.3 ortholog of Bordetella pertussis (BX470248) BP3871; cold shock-like protein 5337388 2661365 BB5013 Bordetella bronchiseptica RB50 cold shock-like protein NP_891547.1 5337182 D 257310 CDS