-- dump date   	20140619_003739
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
NP_886554.1	GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs
NP_886555.1	ortholog of Bordetella pertussis (BX470248) BP0002
NP_886556.1	ortholog of Bordetella pertussis (BX470248) BP0003
NP_886557.1	ortholog of Bordetella pertussis (BX470248) BP0004
NP_886558.1	ortholog of Bordetella pertussis (BX470248) BP0005
NP_886559.1	ortholog of Bordetella pertussis (BX470248) BP0006
NP_886560.1	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu
NP_886561.1	forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force
NP_886562.1	Modulates Rho-dependent transcription termination
NP_886563.1	binds directly to 23S ribosomal RNA
NP_886564.1	in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA
NP_886565.1	binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit
NP_886566.1	present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors
NP_886567.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme
NP_886568.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter
NP_886569.1	ortholog of Bordetella pertussis (BX470248) BP0017
NP_886570.1	ortholog of Bordetella pertussis (BX470248) BP0018
NP_886571.1	ortholog of Bordetella pertussis (BX470248) BP0019
NP_886572.1	ortholog of Bordetella pertussis (BX470248) BP0020
NP_886573.1	ortholog of Bordetella pertussis (BX470248) BP0021
NP_886574.1	ortholog of Bordetella pertussis (BX470248) BP0022
NP_886577.2	interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance
NP_886578.1	binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit
NP_886579.1	EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene
NP_886580.1	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu
NP_886581.1	NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex
NP_886582.2	binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin
NP_886583.1	L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA
NP_886584.1	binds third domain of 23S rRNA and protein L29; part of exit tunnel
NP_886585.1	one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation
NP_886586.1	protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
NP_886587.1	binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center
NP_886588.1	forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation
NP_886589.1	located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e
NP_886590.1	one of the stabilizing components for the large ribosomal subunit
NP_886591.1	primary binding protein; helps mediate assembly; involved in translation fidelity
NP_886592.1	ortholog of Bordetella pertussis (BX470248) BP3623
NP_886593.1	ortholog of Bordetella pertussis (BX470248) BP3624
NP_886594.1	binds to the 23S rRNA between the centers for peptidyl transferase and GTPase
NP_886595.1	assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel
NP_886596.1	part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13
NP_886597.1	located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif
NP_886598.1	binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
NP_886599.1	ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance
NP_886600.1	binds 5S rRNA along with protein L5 and L25
NP_886601.1	located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance
NP_886602.1	L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7
NP_886603.1	late assembly protein
NP_886604.1	forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase
NP_886605.1	stimulates the activities of the other two initiation factors, IF-2 and IF-3
NP_886606.1	smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif
NP_886607.1	located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA
NP_886608.1	located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3
NP_886609.1	primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination
NP_886610.1	catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme
NP_886611.1	is a component of the macrolide binding site in the peptidyl transferase center
NP_886612.1	ortholog of Bordetella pertussis (BX470248) BP3644
NP_886613.1	ortholog of Bordetella pertussis (BX470248) BP3645
NP_886614.1	ortholog of Bordetella pertussis (BX470248) BP3646
NP_886615.1	ortholog of Bordetella pertussis (BX470248) BP3647
NP_886616.1	catalyzes the formation of porphobilinogen from 5-aminolevulinate
NP_886617.1	binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential
NP_886618.1	ortholog of Bordetella pertussis (BX470248) BP3650
NP_886619.1	ortholog of Bordetella pertussis (BX470248) BP3651
NP_886620.1	ortholog of Bordetella pertussis (BX470248) BP3652
NP_886621.1	ortholog of Bordetella pertussis (BX470248) BP3653
NP_886622.1	ortholog of Bordetella pertussis (BX470248) BP3654
NP_886623.1	ortholog of Bordetella pertussis (BX470248) BP3655
NP_886624.1	catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis
NP_886625.1	catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis
NP_886626.1	dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate
NP_886627.1	ortholog of Bordetella pertussis (BX470248) BP3659
NP_886628.1	ortholog of Bordetella pertussis (BX470248) BP3660
NP_886629.1	ortholog of Bordetella pertussis (BX470248) BP3661
NP_886630.1	ortholog of Bordetella pertussis (BX470248) BP3662
NP_886631.1	ortholog of Bordetella pertussis (BX470248) BP3663
NP_886632.1	ortholog of Bordetella pertussis (BX470248) BP3664
NP_886633.1	ortholog of Bordetella pertussis (BX470248) BP3665
NP_886634.1	ortholog of Bordetella pertussis (BX470248) BP3666
NP_886635.1	ortholog of Bordetella pertussis (BX470248) BP3667
NP_886636.1	ortholog of Bordetella pertussis (BX470248) BP3668
NP_886637.1	Catalyzes the hydrolytic cleavage of a carbon-halogen bond in N-ethylammeline
NP_886638.1	ortholog of Bordetella pertussis (BX470248) BP3670
NP_886639.1	ortholog of Bordetella pertussis (BX470248) BP3671
NP_886640.1	ortholog of Bordetella pertussis (BX470248) BP3672
NP_886641.1	ortholog of Bordetella pertussis (BX470248) BP3673
NP_886642.1	ortholog of Bordetella pertussis (BX470248) BP3674
NP_886643.1	ortholog of Bordetella pertussis (BX470248) BP3675
NP_886644.1	ortholog of Bordetella pertussis (BX470248) BP3676
NP_886645.1	ortholog of Bordetella pertussis (BX470248) BP3677
NP_886646.1	ortholog of Bordetella pertussis (BX470248) BP3678
NP_886647.1	ortholog of Bordetella pertussis (BX470248) BP3679
NP_886648.1	catalyzes the formation of malate from glyoxylate and acetyl-CoA
NP_886649.1	ortholog of Bordetella pertussis (BX470248) BP3681
NP_886650.1	ortholog of Bordetella pertussis (BX470248) BP3682
NP_886651.1	ortholog of Bordetella pertussis (BX470248) BP3683
NP_886652.1	catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate, as part of the ubiquinone biosynthesis pathway
NP_886653.1	ortholog of Bordetella pertussis (BX470248) BP3685
NP_886654.1	ortholog of Bordetella pertussis (BX470248) BP3686
NP_886655.1	ortholog of Bordetella pertussis (BX470248) BP3687
NP_886656.1	ortholog of Bordetella pertussis (BX470248) BP3205
NP_886657.1	ortholog of Bordetella pertussis (BX470248) BP3207
NP_886658.1	Catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP
NP_886662.1	Similar to Bordetella bronchiseptica  outer membrane ligand binding protein BipA SWALL:Q9APE8 (EMBL:AF304006) (1578 aa) fasta scores: E(): 1.2e-114, 48.69% id in 807 aa, and to Escherichia coli O157:H7 adhesin EaeH or z0375 or ecs0336 SWALL:Q8X6G3 (EMBL:AE005207) (1417 aa) fasta scores: E(): 2.8e-16, 23.87% id in 1001 aa
NP_886663.1	ortholog of Bordetella pertussis (BX470248) BP3209+BP0705
NP_886664.1	ortholog of Bordetella pertussis (BX470248) BP0706
NP_886665.1	ortholog of Bordetella pertussis (BX470248) BP0707
NP_886666.1	ortholog of Bordetella pertussis (BX470248) BP0708
NP_886667.1	catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes
NP_886668.1	ortholog of Bordetella pertussis (BX470248) BP0710
NP_886669.1	ortholog of Bordetella pertussis (BX470248) BP0711
NP_886670.1	ortholog of Bordetella pertussis (BX470248) BP0712
NP_886671.1	ortholog of Bordetella pertussis (BX470248) BP0713
NP_886672.1	ortholog of Bordetella pertussis (BX470248) BP0715
NP_886675.1	Similar to Mycobacterium tuberculosis  asparagine synthetase [glutamine-hydrolyzing] rv2201 or mt2257 or mtcy190.12 SWALL:ASNH_MYCTU (SWALL:Q10374) (652 aa) fasta scores: E(): 2.8e-41, 30.4% id in 671 aa
NP_886676.1	Similar to Streptomyces venezuelae TDP-glucose-4,6-dehydratase DesiV SWALL:Q9ZGH3 (EMBL:AF079762) (337 aa) fasta scores: E(): 4e-12, 27.07% id in 314 aa, and to Pyrococcus abyssi UDP-glucose 4-epimerase Pab2145 SWALL:Q9V1X1 (EMBL:AJ248284) (307 aa) fasta scores: E(): 1.7e-13, 27.85% id in 298 aa
NP_886677.1	Similar to Methanopyrus kandleri diadenosine tetraphosphatase apah or mk0804 SWALL:Q8TX71 (EMBL:AE010371) (232 aa) fasta scores: E(): 4.9e-14, 32.68% id in 205 aa, and to Pyrococcus horikoshii hypothetical protein Ph1616 ph1616 SWALL:O59233 (EMBL:AP000006) (233 aa) fasta scores: E(): 1.6e-13, 35.21% id in 213 aa
NP_886678.1	undetermined role; similar to CarB protein but much smaller
NP_886679.1	Similar to Streptomyces rishiriensis C-methyltransferase CouU SWALL:Q9F8S9 (EMBL:AF235050) (420 aa) fasta scores: E(): 7.6e-07, 25.95% id in 339 aa, and to Rhizobium meliloti  NDP-hexose 3-C-methyltransferase Rb0640 or Smb21061 SWALL:Q92VQ9 (EMBL:AL603644) (415 aa) fasta scores: E(): 3.4e-09, 29.64% id in 280 aa
NP_886697.1	ortholog of Bordetella pertussis (BX470248) bplL
NP_886698.1	ortholog of Bordetella pertussis (BX470248) bplJ
NP_886699.1	ortholog of Bordetella pertussis (BX470248) bplI
NP_886700.1	ortholog of Bordetella pertussis (BX470248) bplH
NP_886701.1	ortholog of Bordetella pertussis (BX470248) bplG
NP_886702.1	ortholog of Bordetella pertussis (BX470248) bplF
NP_886703.1	ortholog of Bordetella pertussis (BX470248) bplE
NP_886704.1	ortholog of Bordetella pertussis (BX470248) bplD
NP_886705.1	ortholog of Bordetella pertussis (BX470248) bplC
NP_886706.1	ortholog of Bordetella pertussis (BX470248) bplB
NP_886707.1	ortholog of Bordetella pertussis (BX470248) bplA
NP_886708.1	ortholog of Bordetella pertussis (BX470248) BP0094
NP_886709.1	ortholog of Bordetella pertussis (BX470248) BP0095
NP_886711.1	ortholog of Bordetella pertussis (BX470248) BP0096; Previously sequenced as Bordetella bronchiseptica secreted protein Bblps1.35C SWALL:O88004 (EMBL:AJ007747) (51 aa) fasta scores: E(): 5.1e-20, 100% id in 51 aa
NP_886712.1	type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP
NP_886713.1	ortholog of Bordetella pertussis (BX470248) BP0098
NP_886714.1	ortholog of Bordetella pertussis (BX470248) BP0099
NP_886715.1	ortholog of Bordetella pertussis (BX470248) BP0100
NP_886716.1	ortholog of Bordetella pertussis (BX470248) BP0101
NP_886717.1	ortholog of Bordetella pertussis (BX470248) BP0101A
NP_886718.1	ortholog of Bordetella pertussis (BX470248) BP0101B
NP_886719.1	ortholog of Bordetella pertussis (BX470248) BP0102
NP_886720.1	ortholog of Bordetella pertussis (BX470248) BP0103
NP_886721.1	ortholog of Bordetella pertussis (BX470248) BP0104
NP_886722.1	lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein
NP_886723.1	catalyzes the radical-mediated insertion of two sulfur atoms into an ACP (ACP) bound to an octanoyl group to produce a lipoyl group
NP_886724.1	ortholog of Bordetella pertussis (BX470248) BP0107
NP_886725.1	ortholog of Bordetella pertussis (BX470248) BP0108
NP_886726.1	ortholog of Bordetella pertussis (BX470248) BP0109
NP_886727.1	ortholog of Bordetella pertussis (BX470248) BP3090
NP_886728.1	ortholog of Bordetella pertussis (BX470248) BP3088
NP_886729.1	heat shock protein involved in degradation of misfolded proteins
NP_886730.1	heat shock protein involved in degradation of misfolded proteins
NP_886731.1	ortholog of Bordetella pertussis (BX470248) BP3085
NP_886732.1	ortholog of Bordetella pertussis (BX470248) BP3084
NP_886733.1	ortholog of Bordetella pertussis (BX470248) BP3083
NP_886734.1	ortholog of Bordetella pertussis (BX470248) BP3082
NP_886735.1	ortholog of Bordetella pertussis (BX470248) BP3081
NP_886736.1	ortholog of Bordetella pertussis (BX470248) BP3080
NP_886737.1	ortholog of Bordetella pertussis (BX470248) BP3079
NP_886738.1	ortholog of Bordetella pertussis (BX470248) BP3078
NP_886739.1	ortholog of Bordetella pertussis (BX470248) BP3077
NP_886740.1	site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs
NP_886741.1	ortholog of Bordetella pertussis (BX470248) BP3075
NP_886742.1	involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate
NP_886743.1	ortholog of Bordetella pertussis (BX470248) BP3073
NP_886744.1	Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA
NP_886745.2	methionine adenosyltransferase; catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase
NP_886746.1	ortholog of Bordetella pertussis (BX470248) BP3070
NP_886747.1	ortholog of Bordetella pertussis (BX470248) BP3069
NP_886748.1	catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine
NP_886749.1	ortholog of Bordetella pertussis (BX470248) BP3067
NP_886750.1	ortholog of Bordetella pertussis (BX470248) BP3066
NP_886751.1	ortholog of Bordetella pertussis (BX470248) BP3064
NP_886752.1	ortholog of Bordetella pertussis (BX470248) BP3063
NP_886753.1	ortholog of Bordetella pertussis (BX470248) BP3062
NP_886754.1	ortholog of Bordetella pertussis (BX470248) BP3061
NP_886755.1	ortholog of Bordetella pertussis (BX470248) BP3060
NP_886756.1	catalyzes the addition and repair of the 3'-terminal CCA sequence in tRNA; these proteins belong to the CCA-adding enzyme subfamily 2 which does not have phosphohydrolase activity
NP_886757.1	ortholog of Bordetella pertussis (BX470248) BP3058
NP_886758.1	ortholog of Bordetella pertussis (BX470248) BP3057
NP_886759.1	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
NP_886761.1	enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine
NP_886784.1	ortholog of Bordetella pertussis (BX470248) BP0564
NP_886785.1	specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport
NP_886786.1	ortholog of Bordetella pertussis (BX470248) BP0562
NP_886787.1	ortholog of Bordetella pertussis (BX470248) BP0561
NP_886788.1	ortholog of Bordetella pertussis (BX470248) BP0560
NP_886789.1	ortholog of Bordetella pertussis (BX470248) BP0559
NP_886790.1	ortholog of Bordetella pertussis (BX470248) BP0558
NP_886791.1	ortholog of Bordetella pertussis (BX470248) BP0557
NP_886792.1	catalyzes the formation of acetoacetate and acetyl-CoA from 3-hydroxy-3-methylglutaryl-CoA
NP_886793.1	ortholog of Bordetella pertussis (BX470248) BP0555
NP_886794.1	ortholog of Bordetella pertussis (BX470248) BP0554
NP_886795.1	ortholog of Bordetella pertussis (BX470248) BP0553
NP_886796.1	cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+)
NP_886797.1	modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth
NP_886798.1	ortholog of Bordetella pertussis (BX470248) BP0550
NP_886799.1	ortholog of Bordetella pertussis (BX470248) BP0549
NP_886800.1	ortholog of Bordetella pertussis (BX470248) BP0548
NP_886801.1	ortholog of Bordetella pertussis (BX470248) BP0547
NP_886802.1	ortholog of Bordetella pertussis (BX470248) BP0546
NP_886803.1	catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit
NP_886804.1	4-OT; member of subfamily 5; forms a dimer; the function in the Escherichia coli cell is unknown
NP_886805.1	ortholog of Bordetella pertussis (BX470248) BP0543
NP_886806.1	ortholog of Bordetella pertussis (BX470248) BP0542
NP_886807.1	ortholog of Bordetella pertussis (BX470248) BP0541
NP_886808.1	ortholog of Bordetella pertussis (BX470248) BP0566
NP_886809.1	catalyzes the formation of L-aspartate to iminoaspartate in NAD(+) biosynthesis
NP_886810.1	ortholog of Bordetella pertussis (BX470248) BP0568
NP_886811.1	ortholog of Bordetella pertussis (BX470248) BP0569
NP_886812.1	ortholog of Bordetella pertussis (BX470248) BP0570
NP_886813.1	ortholog of Bordetella pertussis (BX470248) BP0571
NP_886814.1	ortholog of Bordetella pertussis (BX470248) BP0572
NP_886815.1	involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain
NP_886816.1	ortholog of Bordetella pertussis (BX470248) BP0574
NP_886817.1	ortholog of Bordetella pertussis (BX470248) BP0575
NP_886818.1	ortholog of Bordetella pertussis (BX470248) BP0576
NP_886819.1	ortholog of Bordetella pertussis (BX470248) BP0577
NP_886820.1	ortholog of Bordetella pertussis (BX470248) BP0578
NP_886821.1	ortholog of Bordetella pertussis (BX470248) BP0579
NP_886822.1	ortholog of Bordetella pertussis (BX470248) BP0580
NP_886823.1	ortholog of Bordetella pertussis (BX470248) BP0581
NP_886824.1	ortholog of Bordetella pertussis (BX470248) BP0582
NP_886825.1	ortholog of Bordetella pertussis (BX470248) BP0583
NP_886826.1	ortholog of Bordetella pertussis (BX470248) BP0584
NP_886827.1	ortholog of Bordetella pertussis (BX470248) BP0585
NP_886828.1	ortholog of Bordetella pertussis (BX470248) BP0586
NP_886829.1	ortholog of Bordetella pertussis (BX470248) BP0589
NP_886830.1	ortholog of Bordetella pertussis (BX470248) BP0590
NP_886831.1	ortholog of Bordetella pertussis (BX470248) BP0591
NP_886832.1	ortholog of Bordetella pertussis (BX470248) BP0592
NP_886833.1	ortholog of Bordetella pertussis (BX470248) BP0593
NP_886834.1	ortholog of Bordetella pertussis (BX470248) BP0594
NP_886835.1	ortholog of Bordetella pertussis (BX470248) BP0595
NP_886836.1	ortholog of Bordetella pertussis (BX470248) BP0596
NP_886837.1	ortholog of Bordetella pertussis (BX470248) BP0597
NP_886838.1	ATP-dependent; carboxylate-amine ligase with weak glutamate--cysteine ligase activity
NP_886839.1	ortholog of Bordetella pertussis (BX470248) BP0599
NP_886840.1	ortholog of Bordetella pertussis (BX470248) BP0600
NP_886841.1	ortholog of Bordetella pertussis (BX470248) BP0601
NP_886842.1	ortholog of Bordetella pertussis (BX470248) BP0602
NP_886843.1	catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate
NP_886844.1	molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA
NP_886845.1	ortholog of Bordetella pertussis (BX470248) BP0605
NP_886846.1	ortholog of Bordetella pertussis (BX470248) BP0606
NP_886847.1	2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate
NP_886848.1	ortholog of Bordetella pertussis (BX470248) BP0608
NP_886849.1	ortholog of Bordetella pertussis (BX470248) BP0609
NP_886850.1	ortholog of Bordetella pertussis (BX470248) BP0610
NP_886851.1	ortholog of Bordetella pertussis (BX470248) BP0209
NP_886852.1	ortholog of Bordetella pertussis (BX470248) BP0208
NP_886853.1	required for the synthesis of the hydromethylpyrimidine moiety of thiamine
NP_886854.1	ortholog of Bordetella pertussis (BX470248) BP0205
NP_886855.1	ortholog of Bordetella pertussis (BX470248) BP0204
NP_886856.1	ortholog of Bordetella pertussis (BX470248) BP0740
NP_886857.1	ortholog of Bordetella pertussis (BX470248) BP0741
NP_886858.1	ortholog of Bordetella pertussis (BX470248) BP0744
NP_886859.1	ortholog of Bordetella pertussis (BX470248) BP0745
NP_886860.1	catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis
NP_886861.1	essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication
NP_886862.1	involved in the peptidyltransferase reaction during translation
NP_886863.1	ortholog of Bordetella pertussis (BX470248) BP0749
NP_886864.1	ortholog of Bordetella pertussis (BX470248) BP0750
NP_886865.1	ortholog of Bordetella pertussis (BX470248) BP0751
NP_886866.1	ortholog of Bordetella pertussis (BX470248) BP0752
NP_886867.1	ortholog of Bordetella pertussis (BX470248) BP0753
NP_886868.1	ortholog of Bordetella pertussis (BX470248) BP0754
NP_886869.1	ortholog of Bordetella pertussis (BX470248) BP0755
NP_886870.1	ortholog of Bordetella pertussis (BX470248) BP0756
NP_886871.1	ortholog of Bordetella pertussis (BX470248) BP0757
NP_886872.1	ortholog of Bordetella pertussis (BX470248) BP0758
NP_886873.1	ortholog of Bordetella pertussis (BX470248) BP0760
NP_886874.1	ortholog of Bordetella pertussis (BX470248) BP0761
NP_886875.1	ortholog of Bordetella pertussis (BX470248) BP0762
NP_886876.1	ortholog of Bordetella pertussis (BX470248) BP0763
NP_886877.1	ortholog of Bordetella pertussis (BX470248) BP0764
NP_886878.1	ortholog of Bordetella pertussis (BX470248) BP0765
NP_886879.1	ortholog of Bordetella pertussis (BX470248) BP0766
NP_886880.1	ortholog of Bordetella pertussis (BX470248) BP0767
NP_886881.1	ortholog of Bordetella pertussis (BX470248) BP0768
NP_886882.1	ortholog of Bordetella pertussis (BX470248) BP0769
NP_886883.1	ortholog of Bordetella pertussis (BX470248) BP0770
NP_886884.1	ortholog of Bordetella pertussis (BX470248) BP0771
NP_886885.1	catalyzes the conversion of 3-hydroxyacyl-CoA to 3-oxyacyl-CoA
NP_886886.1	catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; catalytic
NP_886887.1	ortholog of Bordetella pertussis (BX470248) BP0774
NP_886889.1	ortholog of Bordetella pertussis (BX470248) BP0775
NP_886890.1	ortholog of Bordetella pertussis (BX470248) BP0776
NP_886891.1	ortholog of Bordetella pertussis (BX470248) BP0777
NP_886892.1	ortholog of Bordetella pertussis (BX470248) BP0778
NP_886893.1	ortholog of Bordetella pertussis (BX470248) BP0779
NP_886894.1	ortholog of Bordetella pertussis (BX470248) BP0780
NP_886895.1	ortholog of Bordetella pertussis (BX470248) BP0781
NP_886896.1	ortholog of Bordetella pertussis (BX470248) BP0782
NP_886897.1	ortholog of Bordetella pertussis (BX470248) BP0783
NP_886898.1	ortholog of Bordetella pertussis (BX470248) BP0784
NP_886899.1	ortholog of Bordetella pertussis (BX470248) BP0785
NP_886905.1	Catalyzes the reversible hydration of fumaric acid to yield I-malic acid
NP_886913.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
NP_886929.1	Similar to Ralstonia solanacearum hypothetical protein Rsc2574 or Rs00781 SWALL:Q8XWA1 (EMBL:AL646070) (80 aa) fasta scores: E(): 0.016, 44.06% id in 59 aa
NP_886930.1	Weakly similar to Bacillus thuringiensis hypothetical protein Pbt074 SWALL:CAD30119 (EMBL:AL731825) (349 aa) fasta scores: E(): 0.058, 25.98% id in 304 aa
NP_886931.1	Weakly similar to Halobacterium sp. Orf H1617 Vng6088C SWALL:O54575 (EMBL:AF016485) (276 aa) fasta scores: E(): 0.56, 23.44% id in 290 aa
NP_886932.1	catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins
NP_886933.1	recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2
NP_886934.1	ortholog of Bordetella pertussis (BX470248) BP0679
NP_886935.1	ortholog of Bordetella pertussis (BX470248) BP0680
NP_886936.1	catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate
NP_886937.1	ortholog of Bordetella pertussis (BX470248) BP0682
NP_886938.1	ortholog of Bordetella pertussis (BX470248) BP0683
NP_886939.1	ortholog of Bordetella pertussis (BX470248) BP0684
NP_886940.1	ortholog of Bordetella pertussis (BX470248) BP0684A
NP_886941.1	ortholog of Bordetella pertussis (BX470248) BP0685
NP_886942.1	ortholog of Bordetella pertussis (BX470248) BP0686
NP_886943.1	ortholog of Bordetella pertussis (BX470248) BP3435
NP_886944.1	ortholog of Bordetella pertussis (BX470248) BP3434
NP_886945.1	ortholog of Bordetella pertussis (BX470248) BP3433
NP_886946.1	ortholog of Bordetella pertussis (BX470248) BP3432
NP_886948.1	ortholog of Bordetella pertussis (BX470248) BP3431
NP_886949.1	ortholog of Bordetella pertussis (BX470248) BP3430
NP_886950.1	ortholog of Bordetella pertussis (BX470248) BP3429
NP_886951.1	ortholog of Bordetella pertussis (BX470248) BP3428
NP_886953.1	ortholog of Bordetella pertussis (BX470248) BP3427
NP_886954.1	ortholog of Bordetella pertussis (BX470248) BP3426
NP_886955.1	ortholog of Bordetella pertussis (BX470248) BP3425
NP_886956.1	ortholog of Bordetella pertussis (BX470248) BP3424
NP_886957.1	ortholog of Bordetella pertussis (BX470248) BP0227
NP_886958.1	ortholog of Bordetella pertussis (BX470248) BP0226
NP_886959.1	ortholog of Bordetella pertussis (BX470248) BP0225
NP_886960.1	unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity
NP_886961.1	ortholog of Bordetella pertussis (BX470248) BP0223
NP_886962.1	ortholog of Bordetella pertussis (BX470248) BP0222
NP_886963.1	ortholog of Bordetella pertussis (BX470248) BP0221
NP_886964.1	ortholog of Bordetella pertussis (BX470248) BP0220
NP_886965.1	ortholog of Bordetella pertussis (BX470248) BP0219
NP_886966.1	ortholog of Bordetella pertussis (BX470248) BP0218
NP_886967.1	converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA
NP_886968.1	ortholog of Bordetella pertussis (BX470248) BP0216
NP_886969.1	catalyzes the formation of oxaloacetate from phosphoenolpyruvate
NP_886970.1	ortholog of Bordetella pertussis (BX470248) BP0214
NP_886971.1	ortholog of Bordetella pertussis (BX470248) BP0213
NP_886972.1	ortholog of Bordetella pertussis (BX470248) BP0212
NP_886973.1	ortholog of Bordetella pertussis (BX470248) BP0282
NP_886974.1	ortholog of Bordetella pertussis (BX470248) BP0283
NP_886975.1	ortholog of Bordetella pertussis (BX470248) BP0284
NP_886976.1	ortholog of Bordetella pertussis (BX470248) BP0285
NP_886977.1	ortholog of Bordetella pertussis (BX470248) BP0286
NP_886978.1	ortholog of Bordetella pertussis (BX470248) BP0287
NP_886979.1	ortholog of Bordetella pertussis (BX470248) BP0288
NP_886980.1	catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis
NP_886981.1	ortholog of Bordetella pertussis (BX470248) BP0292
NP_886982.1	ortholog of Bordetella pertussis (BX470248) BP0294
NP_886988.1	ortholog of Bordetella pertussis (BX470248) BP3604
NP_886989.1	ortholog of Bordetella pertussis (BX470248) BP3605
NP_886990.1	ortholog of Bordetella pertussis (BX470248) BP3606
NP_886991.1	ortholog of Bordetella pertussis (BX470248) BP0518
NP_886992.1	ortholog of Bordetella pertussis (BX470248) BP0519
NP_886993.1	ortholog of Bordetella pertussis (BX470248) BP0520
NP_886994.1	ortholog of Bordetella pertussis (BX470248) BP0521
NP_886995.1	ortholog of Bordetella pertussis (BX470248) BP0522
NP_886996.1	ortholog of Bordetella pertussis (BX470248) BP0523
NP_886997.1	ortholog of Bordetella pertussis (BX470248) BP0524
NP_886998.1	ortholog of Bordetella pertussis (BX470248) BP0525
NP_887000.1	ortholog of Bordetella pertussis (BX470248) BP0526
NP_887001.1	ortholog of Bordetella pertussis (BX470248) BP0527
NP_887002.1	ortholog of Bordetella pertussis (BX470248) BP0529
NP_887003.1	ortholog of Bordetella pertussis (BX470248) BP0530
NP_887004.1	ortholog of Bordetella pertussis (BX470248) BP0531
NP_887005.1	ortholog of Bordetella pertussis (BX470248) BP0532
NP_887006.1	ortholog of Bordetella pertussis (BX470248) BP0533
NP_887007.1	ortholog of Bordetella pertussis (BX470248) BP0534
NP_887008.1	ortholog of Bordetella pertussis (BX470248) BP0535
NP_887009.1	ortholog of Bordetella pertussis (BX470248) BP0536
NP_887011.1	ortholog of Bordetella pertussis (BX470248) BP0438
NP_887012.1	ortholog of Bordetella pertussis (BX470248) BP0437
NP_887013.1	ortholog of Bordetella pertussis (BX470248) BP0436
NP_887014.1	ortholog of Bordetella pertussis (BX470248) BP0435
NP_887015.1	ortholog of Bordetella pertussis (BX470248) BP0434
NP_887016.1	ortholog of Bordetella pertussis (BX470248) BP0433
NP_887017.1	ortholog of Bordetella pertussis (BX470248) BP0432
NP_887018.1	ortholog of Bordetella pertussis (BX470248) BP0431
NP_887019.1	ortholog of Bordetella pertussis (BX470248) BP0430
NP_887020.1	ortholog of Bordetella pertussis (BX470248) BP0428
NP_887021.1	ortholog of Bordetella pertussis (BX470248) BP0427
NP_887022.1	ortholog of Bordetella pertussis (BX470248) BP0426
NP_887023.1	ortholog of Bordetella pertussis (BX470248) BP0425
NP_887032.1	no significant database matches
NP_887033.1	Similar to Pediococcus pentosaceus UsG protein usG SWALL:Q9F3X3 (EMBL:AJ276891) (477 aa) fasta scores: E(): 1.7e-64, 43.08% id in 434 aa
NP_887034.1	no significant database matches
NP_887035.1	no significant database matches
NP_887036.1	Similar to Rhizobium meliloti hypothetical 12.7 kDa protein SWALL:Q91UM4 (EMBL:AJ304453) (110 aa) fasta scores: E(): 3.3e-10, 65.45% id in 55 aa, and to Escherichia coli hypothetical 13.1 kDa protein SWALL:Q91UU7 (EMBL:AJ297913) (117 aa) fasta scores: E(): 2.1e-07, 47.22% id in 72 aa
NP_887037.1	no significant database matches
NP_887038.1	no significant database matches
NP_887039.1	Similar to Rhizobium meliloti VirB6 protein SWALL:Q91UR2 (EMBL:AJ304453) (360 aa) fasta scores: E(): 2.9e-40, 46.51% id in 359 aa, and to Escherichia coli VirB6 protein SWALL:Q91UX1 (EMBL:AJ297913) (360 aa) fasta scores: E(): 1.9e-37, 45.4% id in 359 aa
NP_887040.1	Similar to Rhizobium meliloti Eex protein SWALL:Q91UR1 (EMBL:AJ304453) (93 aa) fasta scores: E(): 4.7e-10, 45.94% id in 74 aa, and to Escherichia coli hypothetical 10.3 kDa protein SWALL:Q91UX2 (EMBL:AJ297913) (98 aa) fasta scores: E(): 5.8e-10, 42.85% id in 91 aa
NP_887041.1	no significant database matches
NP_887042.1	Similar to Escherichia coli VirB5 protein SWALL:Q91UX3 (EMBL:AJ297913) (239 aa) fasta scores: E(): 1.1e-50, 67.71% id in 223 aa, and to Rhizobium meliloti VirB5 protein SWALL:Q91UQ9 (EMBL:AJ304453) (242 aa) fasta scores: E(): 4.6e-43, 59.05% id in 232 aa
NP_887043.1	no significant database matches
NP_887044.1	Similar to Escherichia coli VirD2 protein SWALL:Q91UW0 (EMBL:AJ297913) (364 aa) fasta scores: E(): 1.4e-49, 53.65% id in 315 aa, and to Rhizobium meliloti VirD2 protein SWALL:Q91US6 (EMBL:AJ304453) (352 aa) fasta scores: E(): 2.1e-49, 50.13% id in 359 aa
NP_887045.1	Similar to Escherichia coli hypothetical 20.3 kDa protein SWALL:Q91UV9 (EMBL:AJ297913) (180 aa) fasta scores: E(): 2.2e-19, 41.76% id in 170 aa, and to Rhizobium meliloti hypothetical 22.9 kDa protein SWALL:Q91US7 (EMBL:AJ304453) (201 aa) fasta scores: E(): 4e-17, 36.93% id in 176 aa
NP_887046.1	no significant database matches
NP_887047.1	Similar to the N-terminal regions of Escherichia coli O157:H7 O218 protein or PphB or z4044 or ecs3590 SWALL:Q9S6P9 (EMBL:AJ006210) (218 aa) fasta scores: E(): 2.6e-09, 42.15% id in 102 aa, and to Escherichia coli O157:H7 PrpB SWALL:Q9XDI3 (EMBL:AF054420) (218 aa) fasta scores: E(): 2.6e-09, 42.15% id in 102 aa
NP_887048.1	no significant database matches
NP_887049.1	no significant database matches
NP_887051.1	Similar to Haemophilus influenzae integrase/recombinase Hi1572 SWALL:YF72_HAEIN (SWALL:P46495) (366 aa) fasta scores: E(): 0.002, 31.89% id in 116 aa, and to Ralstonia solanacearum probable integrase/recombinase Rsc1655 or Rs03938 SWALL:Q8XYV1 (EMBL:AL646065) (334 aa) fasta scores: E(): 0.023, 39.24% id in 79 aa
NP_887052.1	molecular chaperone
NP_887053.1	ortholog of Bordetella pertussis (BX470248) BP0075
NP_887054.1	ortholog of Bordetella pertussis (BX470248) BP0076
NP_887055.1	ortholog of Bordetella pertussis (BX470248) BP0077
NP_887056.1	ortholog of Bordetella pertussis (BX470248) BP0078
NP_887057.1	ortholog of Bordetella pertussis (BX470248) BP0079
NP_887058.1	ortholog of Bordetella pertussis (BX470248) BP3689
NP_887059.1	ortholog of Bordetella pertussis (BX470248) BP3690
NP_887060.1	ortholog of Bordetella pertussis (BX470248) BP3691
NP_887061.1	tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine
NP_887062.1	ortholog of Bordetella pertussis (BX470248) BP3693
NP_887063.1	ortholog of Bordetella pertussis (BX470248) BP3694
NP_887064.1	ortholog of Bordetella pertussis (BX470248) BP3696
NP_887065.1	ortholog of Bordetella pertussis (BX470248) BP3697
NP_887068.1	ortholog of Bordetella pertussis (BX470248) BP0070
NP_887069.1	ortholog of Bordetella pertussis (BX470248) BP0069
NP_887070.1	ortholog of Bordetella pertussis (BX470248) BP0068
NP_887071.1	ortholog of Bordetella pertussis (BX470248) BP0067
NP_887072.1	ortholog of Bordetella pertussis (BX470248) BP0066
NP_887073.1	ortholog of Bordetella pertussis (BX470248) BP0065
NP_887074.1	ortholog of Bordetella pertussis (BX470248) BP0064
NP_887075.1	ortholog of Bordetella pertussis (BX470248) BP0063
NP_887076.1	no significant database matches
NP_887078.1	Similar to Rhizobium etli hypothetical protein Yh035 SWALL:AAM54968 (EMBL:U80928) (101 aa) fasta scores: E(): 9.2e-09, 40.81% id in 98 aa, and to Caulobacter crescentus transcriptional regulator, cro/ci family Cc2771 SWALL:Q9A4Q9 (EMBL:AE005942) (119 aa) fasta scores: E(): 0.043, 30.61% id in 98 aa
NP_887079.1	no significant database matches
NP_887080.1	ortholog of Bordetella pertussis (BX470248) BP0059
NP_887096.1	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation
NP_887135.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
NP_887138.1	proposed role in polysaccahride synthesis
NP_887160.1	biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate
NP_887164.1	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation
NP_887178.1	ortholog of Bordetella pertussis (BX470248) BP0030
NP_887179.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
NP_887180.1	ortholog of Bordetella pertussis (BX470248) BP3845
NP_887181.1	ortholog of Bordetella pertussis (BX470248) BP3846
NP_887182.1	ortholog of Bordetella pertussis (BX470248) BP3847
NP_887183.1	ortholog of Bordetella pertussis (BX470248) BP3848
NP_887184.1	ortholog of Bordetella pertussis (BX470248) BP3849
NP_887185.1	ortholog of Bordetella pertussis (BX470248) BP3850
NP_887201.1	Similar to Bacillus stearothermophilus aldehyde dehydrogenase AldH SWALL:Q8RKJ5 (EMBL:AJ458323) (494 aa) fasta scores: E(): 1.8e-65, 39.28% id in 476 aa, and to Bacillus halodurans NADP-dependent aldehyde dehydrogenase DhaS or bh0539 SWALL:Q9KFE2 (EMBL:AP001508) (498 aa) fasta scores: E(): 6.6e-66, 38.86% id in 494 aa
NP_887202.1	Similar to Rhizobium meliloti hypothetical protein Ra1058 or Sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 2.9e-46, 43.16% id in 322 aa, and to Agrobacterium tumefaciens hypothetical protein Atu4727 or Agr_l_312 SWALL:Q8U6S9 (EMBL:AE009401) (329 aa) fasta scores: E(): 1.7e-42, 41.17% id in 323 aa
NP_887203.1	Similar to Homo sapiens 3-hydroxyisobutyrate dehydrogenase, mitochondrial precursor HibadH SWALL:D3HI_HUMAN (SWALL:P31937) (336 aa) fasta scores: E(): 1.1e-26, 36.03% id in 308 aa, and to Yersinia pestis 2-hydroxy-3-oxopropionate reductase Ypo3648 SWALL:Q8ZAY4 (EMBL:AJ414158) (296 aa) fasta scores: E(): 6e-31, 38.96% id in 290 aa
NP_887204.1	Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa3778 SWALL:Q9HXL7 (EMBL:AE004796) (311 aa) fasta scores: E(): 1e-31, 35.19% id in 304 aa, and to Ralstonia solanacearum probable transcriptional regulator transcription regulator protein Rsp1571 or Rs02127 SWALL:Q8XPR7 (EMBL:AL646085) (324 aa) fasta scores: E(): 6.2e-25, 30.71% id in 280 aa
NP_887243.1	allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide
NP_887246.1	catalyzes the formation of glyoxylate from (S)-ureidoglycolate
NP_887258.1	catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate
NP_887264.1	Similar to Rhodospirillum rubrum 3-hydroxy-3-methylglutaryl-CoA lyase HmgL SWALL:P95639 (EMBL:U41280) (303 aa) fasta scores: E(): 7.9e-37, 42.43% id in 304 aa, and to Bacillus halodurans hydroxymethylglutaryl-CoA lyase Bh1134 SWALL:Q9KDS7 (EMBL:AP001511) (303 aa) fasta scores: E(): 4e-38, 39.4% id in 302 aa
NP_887265.1	Similar to Ralstonia solanacearum hypothetical protein Rsp1421 or Rs03121 SWALL:Q8XQ65 (EMBL:AL646084) (383 aa) fasta scores: E(): 6e-80, 55.87% id in 383 aa, and to Rhizobium meliloti  conserved membrane-anchored protein Rb0848 or Smb21182 SWALL:Q92V66 (EMBL:AL603645) (394 aa) fasta scores: E(): 9.4e-47, 39.58% id in 384 aa
NP_887266.1	Similar to Caulobacter crescentus isochorismatase family protein Cc1170 SWALL:Q9A924 (EMBL:AE005795) (209 aa) fasta scores: E(): 5.4e-17, 35.54% id in 211 aa, and to Thermoplasma volcanium isochorismatase Tv0543 or Tvg0534221 SWALL:Q97BB4 (EMBL:AP000992) (208 aa) fasta scores: E(): 2.1e-10, 24.88% id in 209 aa
NP_887267.1	Similar to Comamonas testosteroni OrfJ protein SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 8e-34, 39.48% id in 309 aa, and to Rhizobium meliloti hypothetical protein Ra1058 or Sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 1.5e-35, 38.15% id in 304 aa
NP_887268.1	Similar to Streptomyces hygroscopicus carboxyvinyl-carboxyphosphonate phosphorylmutase BcpA SWALL:CPPM_STRHY (SWALL:P11435) (294 aa) fasta scores: E(): 2.5e-40, 44.75% id in 286 aa, and to Anabaena sp. carboxyphosphonoenolpyruvate phosphonomutase All1863 SWALL:Q8YVW0 (EMBL:AP003587) (287 aa) fasta scores: E(): 1.4e-40, 43.4% id in 288 aa
NP_887269.1	Similar to Rhizobium meliloti  ABC transporter periplasmic substrate-binding protein Rb0039 or Smb20036 SWALL:Q92XC3 (EMBL:AL603642) (338 aa) fasta scores: E(): 3.3e-10, 24.85% id in 338 aa, and to Fusobacterium nucleatum N-acetylneuraminate-binding protein Fn1472 SWALL:Q8RDN9 (EMBL:AE010653) (327 aa) fasta scores: E(): 5e-09, 25% id in 332 aa
NP_887270.1	Similar to Rhizobium meliloti hypothetical protein Rb0359 or Smb20373 SWALL:Q92WI0 (EMBL:AL603643) (155 aa) fasta scores: E(): 0.00049, 31.57% id in 152 aa, and to Halomonas elongata small transmembrane protein TeaB SWALL:Q8VPB2 (EMBL:AY061646) (201 aa) fasta scores: E(): 0.00084, 26.7% id in 161 aa
NP_887271.1	Similar to Agrobacterium tumefaciens  transmembrane protein DctM SWALL:Q9F7C8 (EMBL:AF282677) (416 aa) fasta scores: E(): 4e-51, 40.97% id in 410 aa, and to Pasteurella multocida hypothetical protein Pm1527 SWALL:Q9CKS9 (EMBL:AE006189) (442 aa) fasta scores: E(): 6.5e-44, 35.51% id in 428 aa
NP_887272.1	Similar to Xylella fastidiosa hypothetical protein Xf1742 SWALL:Q9PCN6 (EMBL:AE003997) (356 aa) fasta scores: E(): 3.7e-15, 29.96% id in 307 aa, and to Xanthomonas axonopodis gluconolactonase Xac0887 SWALL:AAM35775 (EMBL:AE011720) (286 aa) fasta scores: E(): 7.3e-15, 29.5% id in 261 aa
NP_887273.1	Similar to Escherichia coli O157:H7 hypothetical protein Z0890 or Ecs0759 SWALL:Q8X998 (EMBL:AE005251) (105 aa) fasta scores: E(): 7.3e-15, 46.46% id in 99 aa
NP_887274.1	Similar to Escherichia coli O157:H7 hypothetical protein Z0891 or Ecs0760 SWALL:Q8X991 (EMBL:AE005251) (456 aa) fasta scores: E(): 5.5e-59, 37.96% id in 453 aa
NP_887275.1	Similar to Agrobacterium tumefaciens transcriptional regulator SWALL:Q9F7C7 (EMBL:AF282677) (260 aa) fasta scores: E(): 1.7e-15, 30.73% id in 257 aa, and to Streptomyces coelicolor  IclR-family regulatory protein Sco0574 or Sc5g5.06 SWALL:Q93RZ6 (EMBL:AL591823) (277 aa) fasta scores: E(): 1.5e-15, 31.71% id in 227 aa
NP_887276.1	Similar to Rhizobium meliloti hypothetical protein Ra1058 or Sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 1.4e-36, 36.42% id in 324 aa, and to Comamonas testosteroni OrfJ protein SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 8.2e-30, 35.22% id in 335 aa
NP_887277.1	Similar to Pseudomonas putida toluate 1,2-dioxygenase electron transfer component [includes: ferredoxin; ferredoxin--NAD(+) reductase] xylZ SWALL:XYLZ_PSEPU (SWALL:P23101) (336 aa) fasta scores: E(): 3.2e-31, 34.25% id in 327 aa, and to Burkholderia sp. NK8 electron transfer component of chlorobenzoate 1,2-dioxygenase CbeC SWALL:Q9AQS2 (EMBL:AB024746) (342 aa) fasta scores: E(): 2.1e-31, 35.41% id in 336 aa
NP_887278.1	Similar to Escherichia coli and Escherichia coli O157:H7 3-phenylpropionate dioxygenase alpha subunit HcaE or PhdC1 or HcaA or HcaA1 or DigA or b2538 or z3809 or ecs3404 SWALL:HCAE_ECOLI (SWALL:Q47139) (453 aa) fasta scores: E(): 3.8e-63, 38.2% id in 445 aa, and to Sphingomonas sp  ring-hydroxylating dioxygenase, large subunit SWALL:O86913 (EMBL:AJ223220) (416 aa) fasta scores: E(): 4.4e-79, 48.44% id in 386 aa
NP_887279.1	Similar to Rhizobium etli  short chain type dehydrogenase reductase Yp008 SWALL:AAM54803 (EMBL:U80928) (280 aa) fasta scores: E(): 1.1e-17, 37.27% id in 279 aa, and to Ralstonia solanacearum probable toluenesulfonate zinc-independent alcohol dehydrogenase oxidoreductase TsaC or rsc2351 or rs01195 SWALL:Q8XWW9 (EMBL:AL646069) (252 aa) fasta scores: E(): 4.5e-18, 36.82% id in 258 aa
NP_887280.1	Similar to Pseudomonas putida benzene 1,2-dioxygenase beta subunit bedc2 SWALL:BED2_PSEPU (SWALL:Q07945) (187 aa) fasta scores: E(): 1.9e-17, 36.99% id in 173 aa, and to Rhodococcus erythropolis isopropylbenzene 2,3-dioxygenase ipba2 SWALL:P72257 (EMBL:U24277) (187 aa) fasta scores: E(): 2.1e-18, 36.31% id in 190 aa
NP_887281.1	no significant database matches
NP_887282.1	Similar to Pseudomonas putida FAD-monooxygenase CadA SWALL:Q93AG2 (EMBL:AF421356) (553 aa) fasta scores: E(): 1e-121, 56.37% id in 541 aa, and to Nocardia aerocolonigenes  monooxygenase SWALL:CAC93716 (EMBL:AJ414559) (529 aa) fasta scores: E(): 3.8e-36, 34.18% id in 550 aa
NP_887283.1	Similar to Agrobacterium tumefaciens hypothetical protein Atu4727 or Agr_l_312 SWALL:Q8U6S9 (EMBL:AE009401) (329 aa) fasta scores: E(): 1.3e-46, 46.68% id in 317 aa, and to Comamonas testosteroni OrfJ protein SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 6.3e-37, 37.53% id in 325 aa
NP_887284.1	Similar to the N-terminal region of Escherichia coli 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase HpaG SWALL:HPAG_ECOLI (SWALL:Q46978) (429 aa) fasta scores: E(): 2.9e-20, 37.25% id in 204 aa, and similar to Pseudomonas aeruginosa hypothetical protein Pa4121 SWALL:Q9HWR0 (EMBL:AE004828) (219 aa) fasta scores: E(): 7.1e-22, 37.25% id in 204 aa
NP_887285.1	Similar to the N-terminal region of Escherichia coli 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase HpaG SWALL:HPAG_ECOLI (SWALL:Q46978) (429 aa) fasta scores: E(): 1.3e-42, 57.82% id in 211 aa, and to Pseudomonas aeruginosa hypothetical protein Pa4122 SWALL:Q9HWQ9 (EMBL:AE004828) (259 aa) fasta scores: E(): 9.6e-58, 58.98% id in 256 aa
NP_887286.1	Similar to Escherichia coli 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase HpaE SWALL:Q46979 (EMBL:Z37980) (488 aa) fasta scores: E(): 7.9e-133, 67.82% id in 488 aa, and to Salmonella typhimurium 4-hydroxyphenylacetate catabolism HpaE or Stm1102 SWALL:Q8ZQ48 (EMBL:AE008747) (488 aa) fasta scores: E(): 2.5e-133, 68.03% id in 488 aa
NP_887287.1	Similar to Pseudomonas sp. DJ-12 homoprotocatechuate 2,3-dioxygenase HpaD SWALL:Q93A27 (EMBL:AF433158) (287 aa) fasta scores: E(): 1.8e-101, 80.35% id in 285 aa, and to Escherichia coli 3,4-dihydroxyphenylacetate 2,3-dioxygenase HpaD SWALL:Q46980 (EMBL:Z37980) (282 aa) fasta scores: E(): 8.1e-78, 66.54% id in 281 aa
NP_887288.1	Similar to Escherichia coli 5-carboxymethyl-2-hydroxymuconate delta-isomerase HpaF SWALL:Q46981 (EMBL:Z37980) (125 aa) fasta scores: E(): 0.008, 25.71% id in 140 aa, and to Deinococcus radiodurans 5-carboxymethyl-2-hydroxymuconate isomerase Dra0227 SWALL:Q9RYT1 (EMBL:AE001863) (128 aa) fasta scores: E(): 0.00078, 31.69% id in 142 aa
NP_887289.1	Similar to Rhodococcus sp 2-oxo-hepta-3-ene-1,7-dioic acid hydratase BphE or EtbE SWALL:O05150 (EMBL:D78322) (267 aa) fasta scores: E(): 3.6e-61, 61.11% id in 270 aa, and to Escherichia coli 2-oxo-hepta-3-ene-1,7-dioic acid hydratase HpcG SWALL:HPCG_ECOLI (SWALL:P42270) (264 aa) fasta scores: E(): 2e-52, 56.27% id in 263 aa
NP_887290.1	Similar to Escherichia coli 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase HpcH or HpaI SWALL:HPAI_ECOLI (SWALL:Q47098) (262 aa) fasta scores: E(): 4.3e-60, 64.88% id in 262 aa, and to Deinococcus radiodurans 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase Dra0291 SWALL:Q9RYM1 (EMBL:AE001863) (277 aa) fasta scores: E(): 1.1e-65, 67.39% id in 273 aa
NP_887291.1	Similar to Comamonas testosteroni TsaR SWALL:P94678 (EMBL:U32622) (298 aa) fasta scores: E(): 1.8e-19, 31.72% id in 290 aa, and to Escherichia coli  transcriptional regulator AbgR or b1339 SWALL:ABGR_ECOLI (SWALL:P77744) (302 aa) fasta scores: E(): 4.3e-19, 26.78% id in 295 aa
NP_887292.1	Similar to Rhizobium meliloti hypothetical protein Ra1058 or Sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 2.2e-34, 38.94% id in 303 aa, and to Comamonas testosteroni OrfJ protein SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 4.4e-33, 36.47% id in 318 aa
NP_887293.1	Similar to Citrobacter freundii valine-sensitive acetohydroxy acid synthase SWALL:P94783 (EMBL:D89674) (561 aa) fasta scores: E(): 5.2e-35, 30.03% id in 536 aa, and to Rhizobium meliloti  acetolactate synthase isozyme I large subunit protein IlvB1 or r00567 or smc02263 SWALL:Q92S59 (EMBL:AL591784) (537 aa) fasta scores: E(): 3.6e-42, 35.49% id in 541 aa
NP_887294.1	Similar to Rhodococcus ruber 6-oxolauric acid dehydrogenase CddD SWALL:Q938F1 (EMBL:AY052630) (474 aa) fasta scores: E(): 1.9e-68, 43.46% id in 474 aa, and to Deinococcus radiodurans aldehyde dehydrogenase Dra0126 SWALL:Q9RZ27 (EMBL:AE001862) (495 aa) fasta scores: E(): 7.5e-68, 46.48% id in 469 aa
NP_887295.1	Similar to Pseudomonas sp. lipase LipP SWALL:O52270 (EMBL:AF034088) (308 aa) fasta scores: E(): 8.7e-33, 41.4% id in 285 aa, and to Mycobacterium tuberculosis carboxylesterase family protein rv1399c or mtcy21b4.16c or mt1443 SWALL:P71667 (EMBL:Z80108) (319 aa) fasta scores: E(): 5.1e-33, 44.89% id in 274 aa
NP_887296.1	Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa4987 SWALL:Q9HUH8 (EMBL:AE004911) (199 aa) fasta scores: E(): 4.2e-15, 35.29% id in 187 aa, and to Rhizobium loti hypothetical protein Mll7669 SWALL:Q985H7 (EMBL:AP003012) (205 aa) fasta scores: E(): 1.6e-11, 33.15% id in 190 aa
NP_887297.1	Similar to Variovorax paradoxus, and Burkholderia cepacia 2,4-diphenoxyacetic acid gene cluster SWALL:Q9RHQ7 (EMBL:AB028643) (337 aa) fasta scores: E(): 6.1e-38, 40.38% id in 312 aa, and to Rhizobium meliloti hypothetical protein Ra1058 or Sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 1.8e-40, 41.87% id in 320 aa
NP_887298.1	Weakly similar to Escherichia coli O157:H7 z3937 protein z3937 or ecs3506 SWALL:Q8X978 (EMBL:AE005493) (131 aa) fasta scores: E(): 0.22, 27.61% id in 105 aa
NP_887299.1	Similar to Mycobacterium tuberculosis hypothetical 10.8 kDa protein rv1214c or mtci364.26c or mt1252 SWALL:O05315 (EMBL:Z93777) (110 aa) fasta scores: E(): 7.2, 28.44% id in 109 aa
NP_887300.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
NP_887301.1	ortholog of Bordetella pertussis (BX470248) BP3187; Similar to Cavia sp peroxisomal trans 2-enoyl CoA reductase SWALL:Q9JIF5 (EMBL:AF232010) (302 aa) fasta scores: E(): 3.4e-26, 39.92% id in 253 aa, and to Rattus norvegicus  short-chain dehydrogenase/reductase MrnA, complete cds SWALL:Q9WVK3 (EMBL:AF099742) (303 aa) fasta scores: E(): 6.3e-27, 39.14% id in 258 aa
NP_887302.1	ortholog of Bordetella pertussis (BX470248) BP3188; Similar to Streptomyces coelicolor hypothetical protein sco2032 or sc3a3.10 SWALL:Q9S2Y3 (EMBL:AL109849) (404 aa) fasta scores: E(): 7.9e-21, 33.93% id in 330 aa, and to Rhizobium loti hypothetical protein Mlr6096 SWALL:Q98A97 (EMBL:AP003008) (387 aa) fasta scores: E(): 1.6e-19, 32.78% id in 305 aa
NP_887303.1	ortholog of Bordetella pertussis (BX470248) BP3189; Similar to Archaeoglobus fulgidus coenzyme F390 synthetase af2013 SWALL:O28266 (EMBL:AE000964) (440 aa) fasta scores: E(): 8e-55, 39.18% id in 444 aa, and to Methanosarcina acetivorans coenzyme A ligase ma2244 SWALL:Q8TNN9 (EMBL:AE010911) (433 aa) fasta scores: E(): 1.7e-47, 37.81% id in 439 aa
NP_887304.1	ortholog of Bordetella pertussis (BX470248) BP3190; Similar to Bacillus halodurans transcriptional regulator bh2958 SWALL:Q9K8P5 (EMBL:AP001517) (215 aa) fasta scores: E(): 5.2e-09, 24.73% id in 190 aa, and to Deinococcus radiodurans transcriptional regulator, tetr family dr2376 SWALL:Q9RRV9 (EMBL:AE002068) (197 aa) fasta scores: E(): 5.1e-08, 27.97% id in 193 aa
NP_887305.1	ortholog of Bordetella pertussis (BX470248) BP3191; Similar to Thermoanaerobacter tengcongensis acyl-CoA dehydrogenases CaiA or tte0545 SWALL:Q8RC91 (EMBL:AE013024) (380 aa) fasta scores: E(): 2.7e-50, 40.1% id in 379 aa, and to Pseudomonas aeruginosa probable acyl-CoA dehydrogenase pa2552 SWALL:Q9I0T2 (EMBL:AE004683) (375 aa) fasta scores: E(): 2.7e-49, 40.22% id in 363 aa
NP_887306.1	ortholog of Bordetella pertussis (BX470248) BP3192; Similar to Deinococcus radiodurans branched-chain amino acid ABC transporter permease Dr0282 SWALL:Q9RXM8 (EMBL:AE001889) (334 aa) fasta scores: E(): 2.3e-21, 31.77% id in 321 aa, and to Archaeoglobus fulgidus branched-chain amino acid ABC transporter permease Af0824 SWALL:O29434 (EMBL:AE001047) (323 aa) fasta scores: E(): 4.6e-21, 28.57% id in 294 aa
NP_887307.1	ortholog of Bordetella pertussis (BX470248) BP3193; Similar to Deinococcus radiodurans branched-chain amino acid ABC transporter permease dr0281 SWALL:Q9RXM9 (EMBL:AE001889) (285 aa) fasta scores: E(): 1.8e-25, 31.57% id in 285 aa, and to Brucella melitensis high-affinity branched-chain amino acid transport system permease livh / high-affinity branched-chain amino acid transport ATP-binding protein livg bmeii0874 SWALL:Q8YBM5 (EMBL:AE009721) (916 aa) fasta scores: E(): 1.3e-26, 34.5% id in 284 aa
NP_887308.1	ortholog of Bordetella pertussis (BX470248) BP3194; Similar to Deinococcus radiodurans branched-chain amino acid ABC transporter ATP-binding protein dra0260 SWALL:Q9RYP9 (EMBL:AE001863) (238 aa) fasta scores: E(): 4.8e-30, 49.19% id in 248 aa, and to Ralstonia solanacearum probable amino-acid composite ATP-binding transmembrane ABC transporter protein rsp0707 or rs01742 SWALL:Q8XRX4 (EMBL:AL646080) (247 aa) fasta scores: E(): 5e-30, 45.37% id in 238 aa
NP_887309.1	ortholog of Bordetella pertussis (BX470248) BP3195
NP_887310.1	ortholog of Bordetella pertussis (BX470248) BP3196; Similar to Citrobacter freundii leu/ile/val-binding protein precursor LivJ SWALL:LIVJ_CITFR (SWALL:P25399) (367 aa) fasta scores: E(): 2.4e-14, 28.41% id in 359 aa, and to Rhizobium loti ABC transporter binding protein mlr7721 SWALL:Q985D9 (EMBL:AP003012) (399 aa) fasta scores: E(): 4e-17, 26.68% id in 371 aa
NP_887311.1	ortholog of Bordetella pertussis (BX470248) BP3197; Similar to Bos taurus 3-hydroxyacyl-CoA dehydrogenase type II HadH2 SWALL:HCD2_BOVIN (SWALL:O02691) (261 aa) fasta scores: E(): 4e-41, 52.17% id in 253 aa, and to Mycobacterium tuberculosis oxidoreductase, short-chain dehydrogenase/reductase family rv1144 or mtci65.11 or mt1177 SWALL:O06544 (EMBL:Z95584) (250 aa) fasta scores: E(): 4.8e-47, 58.98% id in 256 aa
NP_887312.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
NP_887313.1	ortholog of Bordetella pertussis (BX470248) BP3199; Similar to Archaeoglobus fulgidus hypothetical protein Af1292 SWALL:O28977 (EMBL:AE001015) (136 aa) fasta scores: E(): 5.3e-05, 31.62% id in 117 aa, and to Methanopyrus kandleri predicted nucleic-acid-binding protein containing a zn-ribbon mk1377 SWALL:Q8TVL2 (EMBL:AE010431) (134 aa) fasta scores: E(): 0.0002, 33.02% id in 109 aa
NP_887314.1	ortholog of Bordetella pertussis (BX470248) BP3200; Similar to Rhodococcus sp. NCIMB 9784 non-specific lipid carrier-like protein CampC SWALL:Q93TU4 (EMBL:AF323755) (408 aa) fasta scores: E(): 3.7e-23, 31% id in 387 aa, and to Pseudomonas aeruginosa hypothetical protein Pa1016 SWALL:Q9I4V7 (EMBL:AE004534) (383 aa) fasta scores: E(): 1.2e-90, 62.14% id in 383 aa
NP_887315.1	ortholog of Bordetella pertussis (BX470248) BP3201; Similar to Pseudomonas aeruginosa PhaJ2 or pa1018 SWALL:Q9LBK1 (EMBL:AB040026) (288 aa) fasta scores: E(): 8.9e-40, 46.45% id in 282 aa, and to Mycobacterium tuberculosis maoc family protein rv3389c or mtv004.47c or mt3496 SWALL:Q11198 (EMBL:U27357) (290 aa) fasta scores: E(): 1e-31, 41.61% id in 298 aa
NP_887316.1	ortholog of Bordetella pertussis (BX470248) BP3202; Similar to Xanthomonas campestris hypothetical protein Xcc2124 SWALL:AAM41409 (EMBL:AE012319) (354 aa) fasta scores: E(): 1.3e-28, 32.7% id in 370 aa, and to Arabidopsis thaliana hypothetical 44.2 kDa protein t22a6.50 or at4g24220 or at4g24220, t22a6.50 SWALL:Q9STX2 (EMBL:AL078637) (388 aa) fasta scores: E(): 1.3e-17, 30.42% id in 378 aa
NP_887317.1	Similar to Comamonas testosteroni OrfJ protein SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 2.2e-40, 39.56% id in 321 aa, and to Rhizobium meliloti hypothetical protein ra1058 ra1058 or sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 5.2e-38, 39.24% id in 316 aa
NP_887318.1	Similar to Streptomyces coelicolor hypothetical protein sco6307 or scif3.09C SWALL:Q93RT4 (EMBL:AL590982) (320 aa) fasta scores: E(): 6.7e-06, 30.83% id in 334 aa, and to Arthrobacter nicotinovorans hypothetical polyketide cyclase SWALL:Q93NG4 (EMBL:AF373840) (310 aa) fasta scores: E(): 0.0014, 30.26% id in 337 aa
NP_887319.1	Similar to Ralstonia solanacearum probable transcription regulator protein rsc3411 or rs01720 SWALL:Q8XTY4 (EMBL:AL646075) (262 aa) fasta scores: E(): 5.1e-31, 42% id in 250 aa, and to Rhodococcus opacus PcaR pcaR SWALL:O67983 (EMBL:AF003947) (265 aa) fasta scores: E(): 1.3e-20, 36.32% id in 234 aa
NP_887320.1	Similar to Proteus mirabilis amino acid deaminase AaD SWALL:Q51890 (EMBL:U35383) (473 aa) fasta scores: E(): 1.9e-39, 34.33% id in 431 aa, and to Agrobacterium tumefaciens oxidoreductase AgaE or atu3050 or agr_l_3510 SWALL:Q8UBG6 (EMBL:AE009235) (449 aa) fasta scores: E(): 2.1e-67, 45.54% id in 426 aa
NP_887321.1	Similar to Brevibacillus borstelensis thermostable dipeptidase Bdp SWALL:Q9KH70 (EMBL:AF268476) (307 aa) fasta scores: E(): 1.9e-16, 33.69% id in 184 aa, and to Ralstonia solanacearum  dipeptidase rsp0056 or rs02031 SWALL:Q8XTQ0 (EMBL:AL646076) (323 aa) fasta scores: E(): 4.6e-33, 37.95% id in 332 aa
NP_887322.1	Similar to Alcaligenes eutrophus hypothetical 35.6 kDa protein in gbd 5'region precursor SWALL:YGB7_ALCEU (SWALL:Q44018) (327 aa) fasta scores: E(): 2e-47, 42.3% id in 312 aa, and to Comamonas testosteroni OrfJ protein SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 4.4e-25, 29.19% id in 322 aa
NP_887323.1	no significant database matches
NP_887324.1	Similar to Agrobacterium tumefaciens transcriptional regulator, AraC family atu4132 or agr_l_1441 SWALL:Q8U8G0 (EMBL:AE009344) (347 aa) fasta scores: E(): 1.3e-06, 27.88% id in 269 aa, and to Caulobacter crescentus transcriptional regulator, AraC family cc0713 SWALL:Q9AA93 (EMBL:AE005746) (446 aa) fasta scores: E(): 2.2e-05, 25.42% id in 354 aa
NP_887325.1	no significant database matches
NP_887326.1	no significant database matches
NP_887327.1	no significant database matches
NP_887328.1	no significant database matches
NP_887329.1	Similar to Pseudomonas putida type 4 fimbrial assembly protein PilC SWALL:PILC_PSEPU (SWALL:P36641) (401 aa) fasta scores: E(): 7.2e-28, 29.68% id in 411 aa, and to Pseudomonas aeruginosa general secretion pathway protein F XcpS or pa3102 SWALL:GSPF_PSEAE (SWALL:Q00513) (405 aa) fasta scores: E(): 5.1e-27, 27.42% id in 412 aa
NP_887330.1	Similar to Pseudomonas putida XcpR protein SWALL:Q52292 (EMBL:X81085) (482 aa) fasta scores: E(): 8.6e-51, 43.21% id in 405 aa, and to Vibrio cholerae general secretion pathway protein E EpsE or vc2732 SWALL:GSPE_VIBCH (SWALL:P37093) (503 aa) fasta scores: E(): 6.2e-50, 38.51% id in 457 aa
NP_887331.1	Similar to Aeromonas hydrophila general secretion pathway protein A ExeA SWALL:GSPA_AERHY (SWALL:P45754) (547 aa) fasta scores: E(): 8.2e-19, 37.69% id in 260 aa, and to Vibrio cholerae general secretion pathway protein A vc2445 SWALL:Q9KPC7 (EMBL:AE004314) (529 aa) fasta scores: E(): 5.1e-18, 32.55% id in 301 aa
NP_887332.1	no significant database matches
NP_887333.1	Similar to Vibrio cholerae mannose-sensitive hemagglutinin D MshD SWALL:Q56673 (EMBL:L19085) (559 aa) fasta scores: E(): 1.8e-19, 24.1% id in 560 aa, and to Xanthomonas campestris general secretion pathway protein D precursor XpsD or PefD or xcc0670 SWALL:GSPD_XANCP (SWALL:P29041) (759 aa) fasta scores: E(): 3.4e-14, 26.76% id in 426 aa
NP_887334.1	no significant database matches
NP_887335.1	no significant database matches
NP_887336.1	no significant database matches
NP_887337.1	no significant database matches
NP_887338.1	no significant database matches
NP_887339.1	Similar to Escherichia coli CFA/III pilin CofA SWALL:Q59393 (EMBL:D37957) (238 aa) fasta scores: E(): 7, 25.74% id in 202 aa, and to Escherichia coli hypothetical type II secretion protein GspG gspG SWALL:Q8VRM7 (EMBL:AF426313) (151 aa) fasta scores: E(): 1, 28.7% id in 108 aa
NP_887340.1	Similar to Pseudomonas aeruginosa twitching mobility protein PilT or pa0395 SWALL:PILT_PSEAE (SWALL:P24559) (344 aa) fasta scores: E(): 1.1e-74, 66.37% id in 339 aa, and to Xanthomonas axonopodis twitching motility protein PilT or xac2924 or xcc2755 SWALL:AAM42027 (EMBL:AE011934) (345 aa) fasta scores: E(): 1.6e-83, 70.46% id in 342 aa
NP_887341.1	Similar to Burkholderia pseudomallei type 4 prepilin-like proteins leader peptide processing enzyme [includes: leader peptidase gspO SWALL:LEP4_BURPS (SWALL:Q9ZF70) (275 aa) fasta scores: E(): 5.3e-41, 51.35% id in 259 aa, and to Erwinia chrysanthemi type 4 prepilin-like proteins leader peptide processing enzyme outO SWALL:LEP4_ERWCH (SWALL:P31711) (283 aa) fasta scores: E(): 3.7e-37, 49.43% id in 267 aa
NP_887342.1	Similar to Salmonella enterica subsp. enterica serovar Typhimurium VrgS protein SWALL:Q93IR3 (EMBL:AJ320483) (729 aa) fasta scores: E(): 5.1e-85, 41.82% id in 593 aa, and to Escherichia coli VgrE protein SWALL:O52660 (EMBL:AF044499) (702 aa) fasta scores: E(): 4.4e-54, 29.18% id in 699 aa
NP_887371.1	ortholog of Bordetella pertussis (BX470248) BP3092
NP_887372.1	ortholog of Bordetella pertussis (BX470248) BP3093
NP_887373.1	ortholog of Bordetella pertussis (BX470248) BP3094
NP_887374.1	ortholog of Bordetella pertussis (BX470248) BP3095
NP_887375.1	ortholog of Bordetella pertussis (BX470248) BP3096
NP_887376.1	ortholog of Bordetella pertussis (BX470248) BP3097
NP_887377.1	ortholog of Bordetella pertussis (BX470248) BP3098
NP_887378.1	ortholog of Bordetella pertussis (BX470248) BP3099
NP_887379.1	ortholog of Bordetella pertussis (BX470248) BP3100
NP_887381.1	ortholog of Bordetella pertussis (BX470248) BP3101
NP_887382.1	ortholog of Bordetella pertussis (BX470248) BP3102
NP_887383.1	ortholog of Bordetella pertussis (BX470248) BP0539
NP_887384.1	ortholog of Bordetella pertussis (BX470248) BP0538
NP_887385.1	ortholog of Bordetella pertussis (BX470248) BP0176
NP_887386.1	ortholog of Bordetella pertussis (BX470248) BP0177
NP_887387.1	ortholog of Bordetella pertussis (BX470248) BP0178
NP_887388.1	ortholog of Bordetella pertussis (BX470248) BP0179
NP_887389.1	methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content
NP_887390.1	ortholog of Bordetella pertussis (BX470248) BP0181
NP_887391.1	ortholog of Bordetella pertussis (BX470248) BP0182
NP_887392.1	ortholog of Bordetella pertussis (BX470248) BP0183
NP_887393.1	ortholog of Bordetella pertussis (BX470248) BP0184
NP_887394.1	Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis
NP_887395.1	ortholog of Bordetella pertussis (BX470248) BP0186
NP_887396.1	ortholog of Bordetella pertussis (BX470248) BP0187
NP_887397.1	ortholog of Bordetella pertussis (BX470248) BP0188
NP_887398.1	ortholog of Bordetella pertussis (BX470248) BP0189
NP_887399.1	ortholog of Bordetella pertussis (BX470248) BP0190
NP_887400.1	ortholog of Bordetella pertussis (BX470248) BP0191
NP_887401.1	ortholog of Bordetella pertussis (BX470248) BP0193
NP_887402.1	ortholog of Bordetella pertussis (BX470248) BP0194
NP_887403.1	catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein
NP_887404.1	part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor
NP_887405.1	acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine
NP_887406.1	ortholog of Bordetella pertussis (BX470248) BP0198
NP_887407.1	ortholog of Bordetella pertussis (BX470248) BP0199
NP_887408.1	ortholog of Bordetella pertussis (BX470248) BP0200
NP_887409.1	ortholog of Bordetella pertussis (BX470248) BP0201
NP_887412.1	ortholog of Bordetella pertussis (BX470248) BP3163
NP_887413.1	ortholog of Bordetella pertussis (BX470248) BP3162
NP_887414.1	ortholog of Bordetella pertussis (BX470248) BP3161
NP_887415.1	ortholog of Bordetella pertussis (BX470248) BP3160
NP_887416.1	ortholog of Bordetella pertussis (BX470248) BP3159
NP_887417.1	ortholog of Bordetella pertussis (BX470248) BP3158
NP_887418.1	catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate
NP_887419.1	ortholog of Bordetella pertussis (BX470248) BP3156
NP_887420.1	ortholog of Bordetella pertussis (BX470248) BP3155
NP_887421.1	ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived
NP_887422.1	ortholog of Bordetella pertussis (BX470248) BP3153
NP_887423.1	ortholog of Bordetella pertussis (BX470248) BP3152
NP_887424.1	ortholog of Bordetella pertussis (BX470248) BP3151
NP_887425.1	ortholog of Bordetella pertussis (BX470248) BP3150
NP_887426.1	ortholog of Bordetella pertussis (BX470248) BP3149
NP_887427.1	ortholog of Bordetella pertussis (BX470248) BP3148
NP_887428.1	ortholog of Bordetella pertussis (BX470248) BP3147
NP_887429.1	ortholog of Bordetella pertussis (BX470248) BP3146
NP_887430.1	ortholog of Bordetella pertussis (BX470248) BP3145
NP_887431.1	ortholog of Bordetella pertussis (BX470248) BP3144
NP_887432.1	ortholog of Bordetella pertussis (BX470248) BP3143
NP_887433.1	functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family
NP_887434.1	ortholog of Bordetella pertussis (BX470248) BP3141
NP_887435.1	ortholog of Bordetella pertussis (BX470248) BP3140
NP_887436.1	ortholog of Bordetella pertussis (BX470248) BP3139
NP_887437.1	ortholog of Bordetella pertussis (BX470248) BP3138
NP_887438.1	ortholog of Bordetella pertussis (BX470248) BP3137
NP_887439.1	ortholog of Bordetella pertussis (BX470248) BP3136
NP_887440.1	ortholog of Bordetella pertussis (BX470248) BP3135
NP_887441.1	An oxygenase that acts to open the ring of homogentisate formingmaleylacetoacetate as part of the catabolism of L-tyrosine and L-phenylalanine
NP_887442.1	ortholog of Bordetella pertussis (BX470248) BP3133
NP_887443.1	ortholog of Bordetella pertussis (BX470248) BP3132
NP_887444.1	ortholog of Bordetella pertussis (BX470248) BP3131
NP_887445.1	ortholog of Bordetella pertussis (BX470248) BP3130
NP_887446.2	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases
NP_887447.1	ortholog of Bordetella pertussis (BX470248) BP3128
NP_887448.1	Incorporates lipoproteins in the outer membrane after they are released by the LolA protein
NP_887449.1	An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis
NP_887450.1	catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP
NP_887451.1	the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response
NP_887452.1	Enables the recycling of peptidyl-tRNAs produced at termination of translation
NP_887453.1	ortholog of Bordetella pertussis (BX470248) BP3122
NP_887454.1	translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1
NP_887455.1	ortholog of Bordetella pertussis (BX470248) BP3120; Similar to Escherichia coli integrase Int SWALL:Q93SE7 (EMBL:AJ278144) (394 aa) fasta scores: E(): 5.8e-38, 32.23% id in 394 aa, and to Shigella flexneri Int SWALL:Q9XCI7 (EMBL:AF141323) (394 aa) fasta scores: E(): 5e-38, 32.48% id in 394 aa
NP_887456.1	ortholog of Bordetella pertussis (BX470248) BP3118; Similar to Methanosarcina mazei hypothetical protein Mm2606 SWALL:AAM32302 (EMBL:AE013505) (359 aa) fasta scores: E(): 6.3e-09, 22.75% id in 334 aa, and to Escherichia coli O157:H7 orf, hypothetical protein z5009 or ecs4465 SWALL:Q8XDJ0 (EMBL:AE005585) (431 aa) fasta scores: E(): 1.2e-08, 27.64% id in 322 aa
NP_887457.1	Similar to Pasteurella multocida hypothetical protein Pm0696 SWALL:Q9CMV8 (EMBL:AE006106) (1089 aa) fasta scores: E(): 0, 61.3% id in 1101 aa, and to Listeria innocua hypothetical protein Pli0027 pli0027 SWALL:Q926M9 (EMBL:AL592102) (1001 aa) fasta scores: E(): 4.1e-113, 50.14% id in 1031 aa
NP_887458.1	Similar to Pasteurella multocida hypothetical protein Pm0697 SWALL:Q9CMV7 (EMBL:AE006106) (220 aa) fasta scores: E(): 2.7e-27, 38.63% id in 220 aa, and to Chlorobium tepidum TLS hypothetical protein ct0907 SWALL:AAM72142 (EMBL:AE012856) (252 aa) fasta scores: E(): 0.00094, 29.48% id in 234 aa
NP_887459.1	Similar to Rhizobium sp. hypothetical 37.6 kDa aaa-family ATPase Y4kL y4kL SWALL:Y4KL_RHISN (SWALL:P55530) (330 aa) fasta scores: E(): 1.8e-38, 41.41% id in 326 aa, and to Salmonella enterica subsp. enterica serovar Typhimurium  ATPase s026 SWALL:Q9ADT7 (EMBL:AF261825) (329 aa) fasta scores: E(): 2.2e-28, 34.46% id in 325 aa
NP_887460.1	Similar to Rhizobium etli hypothetical protein yp094 SWALL:AAM55046 (EMBL:U80928) (823 aa) fasta scores: E(): 1.7e-08, 24.12% id in 858 aa, and to Agrobacterium tumefaciens hypothetical protein atu6083 atu6083 or agr_pti_160 SWALL:Q8U652 (EMBL:AE009427) (836 aa) fasta scores: E(): 3e-08, 25.19% id in 647 aa
NP_887461.1	Similar to Moraxella catarrhalis type III restriction-modification system methyltransferase Mod SWALL:Q93LB8 (EMBL:AY049056) (636 aa) fasta scores: E(): 2e-74, 37.9% id in 612 aa, and to Pasteurella multocida hypothetical protein Pm0698 pm0698 SWALL:Q9CMV6 (EMBL:AE006106) (636 aa) fasta scores: E(): 9.5e-69, 50.31% id in 644 aa
NP_887462.1	Similar to Salmonella typhimurium type III restriction-modification system stylti enzyme res res or stm0358 SWALL:T3RE_SALTY (SWALL:P40815) (990 aa) fasta scores: E(): 1.2e-21, 26.35% id in 1017 aa, and to Pasteurella multocida hypothetical protein Pm0699 pm0699 SWALL:Q9CMV5 (EMBL:AE006106) (1043 aa) fasta scores: E(): 2.4e-134, 52.32% id in 1055 aa
NP_887463.1	Similar to Salmonella enterica subsp. enterica serovar Typhimurium  integrase s020 SWALL:Q9ADU1 (EMBL:AF261825) (321 aa) fasta scores: E(): 1.4e-05, 29.43% id in 214 aa, and to Francisella novicida hypothetical 33.7 kDa protein SWALL:Q9Z5W6 (EMBL:AF121418) (292 aa) fasta scores: E(): 1.2e-31, 41.94% id in 236 aa
NP_887464.1	Similar to Xanthomonas axonopodis hypothetical protein Xac2208 xac2208 SWALL:AAM37061 (EMBL:AE011858) (407 aa) fasta scores: E(): 8.9e-15, 33.06% id in 366 aa, and to Xylella fastidiosa hypothetical protein Xf1781 xf1781 SWALL:Q9PCJ8 (EMBL:AE004000) (418 aa) fasta scores: E(): 5.3e-14, 32.59% id in 359 aa
NP_887471.1	ortholog of Bordetella pertussis (BX470248) BP3452
NP_887472.1	catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; also known as acetolactate synthase large subunit
NP_887473.1	ortholog of Bordetella pertussis (BX470248) BP3454
NP_887474.1	ortholog of Bordetella pertussis (BX470248) BP3455
NP_887475.1	catalyzes the oxidative decarboxylation of malate to form pyruvate
NP_887476.1	ortholog of Bordetella pertussis (BX470248) BP3457
NP_887477.1	ortholog of Bordetella pertussis (BX470248) BP3458
NP_887478.1	ortholog of Bordetella pertussis (BX470248) BP3459
NP_887479.1	ortholog of Bordetella pertussis (BX470248) BP3460
NP_887480.1	ortholog of Bordetella pertussis (BX470248) BP3461
NP_887481.1	ortholog of Bordetella pertussis (BX470248) BP3462
NP_887482.1	ortholog of Bordetella pertussis (BX470248) BP3463
NP_887483.1	ortholog of Bordetella pertussis (BX470248) BP3464
NP_887484.1	ortholog of Bordetella pertussis (BX470248) BP3465
NP_887485.1	ortholog of Bordetella pertussis (BX470248) BP3466
NP_887486.1	ortholog of Bordetella pertussis (BX470248) BP3467
NP_887487.1	ortholog of Bordetella pertussis (BX470248) BP3468
NP_887488.1	ortholog of Bordetella pertussis (BX470248) BP3469
NP_887489.1	ortholog of Bordetella pertussis (BX470248) BP3470
NP_887490.1	Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA
NP_887491.1	ortholog of Bordetella pertussis (BX470248) BP3472
NP_887492.1	ortholog of Bordetella pertussis (BX470248) BP3473
NP_887493.1	ortholog of Bordetella pertussis (BX470248) BP3474
NP_887494.1	ortholog of Bordetella pertussis (BX470248) BP3476
NP_887495.1	ortholog of Bordetella pertussis (BX470248) BP3477
NP_887496.1	ortholog of Bordetella pertussis (BX470248) BP3479
NP_887497.1	ortholog of Bordetella pertussis (BX470248) BP3481
NP_887498.1	ortholog of Bordetella pertussis (BX470248) BP3482
NP_887499.1	ortholog of Bordetella pertussis (BX470248) BP3483
NP_887500.1	bifunctional enzyme DHBP synthase/GTP cyclohydrolase II-like protein; functions in riboflavin synthesis
NP_887501.1	RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not
NP_887502.1	Regulates rRNA biosynthesis by transcriptional antitermination
NP_887503.1	catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP
NP_887504.1	ortholog of Bordetella pertussis (BX470248) BP3488
NP_887505.1	ortholog of Bordetella pertussis (BX470248) BP3489
NP_887506.1	OMP decarboxylase; OMPDCase; OMPdecase; type 2 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase
NP_887507.1	ortholog of Bordetella pertussis (BX470248) BP3491
NP_887508.1	ortholog of Bordetella pertussis (BX470248) BP3492
NP_887509.1	ortholog of Bordetella pertussis (BX470248) BP3493
NP_887510.1	60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth
NP_887511.1	10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring
NP_887512.1	ortholog of Bordetella pertussis (BX470248) BP3497
NP_887513.1	ortholog of Bordetella pertussis (BX470248) BP3498
NP_887514.1	ortholog of Bordetella pertussis (BX470248) BP3499
NP_887515.1	proposed role in polysaccahride synthesis
NP_887516.1	ortholog of Bordetella pertussis (BX470248) BP3501
NP_887517.1	ortholog of Bordetella pertussis (BX470248) BP3503
NP_887518.1	proposed role in polysaccahride synthesis
NP_887551.1	Similar to Comamonas testosteroni OrfJ protein SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 4.3e-30, 36.72% id in 324 aa, and to Rhizobium meliloti hypothetical protein ra1058 ra1058 or sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 7.4e-30, 34.4% id in 311 aa
NP_887552.1	Similar to Salmonella typhimurium OsmT protein SWALL:Q93IN5 (EMBL:AJ313506) (308 aa) fasta scores: E(): 1.1e-19, 29.86% id in 298 aa, and to Salmonella typhi LysR-family transcriptioanl regulator sty3944 SWALL:Q8Z2N3 (EMBL:AL627280) (302 aa) fasta scores: E(): 4e-20, 28.96% id in 290 aa
NP_887553.1	Similar to Pseudomonas aeruginosa probable ATP-binding protein of ABC transporter pa2061 SWALL:Q9I254 (EMBL:AE004632) (536 aa) fasta scores: E(): 4.5e-71, 46.08% id in 523 aa, and to Agrobacterium tumefaciens ABC transporter nucleotide binding/ATPase atu5068 or agr_pat_93 SWALL:Q8UKN2 (EMBL:AE008931) (539 aa) fasta scores: E(): 9.8e-69, 41.87% id in 554 aa
NP_887554.1	Similar to Bacillus halodurans oligopeptide ABC transporter AppB or bh0348 SWALL:Q9KFX2 (EMBL:AP001508) (305 aa) fasta scores: E(): 3.6e-28, 32.51% id in 286 aa, and to Ralstonia solanacearum probable transmembrane ABC transporter protein rsc1381 or rs04750 SWALL:Q8XZL4 (EMBL:AL646064) (307 aa) fasta scores: E(): 1.4e-26, 34.69% id in 294 aa
NP_887555.1	Similar to Agrobacterium tumefaciens AgaC SWALL:O50261 (EMBL:AF242881) (275 aa) fasta scores: E(): 7.8e-30, 38.49% id in 265 aa, and to Bacillus halodurans oligopeptide ABC transporter bh0030 SWALL:Q9KGM8 (EMBL:AP001507) (301 aa) fasta scores: E(): 2.7e-30, 35.15% id in 256 aa
NP_887556.1	Similar to Agrobacterium tumefaciens ABC transporter substrate-binding protein atu5343 or agr_pat_490 SWALL:Q8UJY1 (EMBL:AE008956) (517 aa) fasta scores: E(): 1.9e-22, 31.03% id in 406 aa, and to Rhizobium loti dipeptide-binding protein of ABC transporter mlr1186 SWALL:Q98L42 (EMBL:AP002996) (497 aa) fasta scores: E(): 1.8e-21, 28.38% id in 465 aa
NP_887557.1	Weakly similar to Clostridium acetobutylicum ap superfamily cac0477 SWALL:Q97LS7 (EMBL:AE007562) (434 aa) fasta scores: E(): 0.00024, 20.63% id in 441 aa, and to Clostridium perfringens hypothetical protein Cpe1375 cpe1375 SWALL:Q8XKL9 (EMBL:AP003190) (431 aa) fasta scores: E(): 0.13, 20.5% id in 434 aa
NP_887558.1	Similar to Pseudomonas fluorescens phosphonoacetate hydrolase PhnA SWALL:Q51782 (EMBL:L49465) (407 aa) fasta scores: E(): 1.7e-79, 52.06% id in 411 aa, and to Rhizobium meliloti  phosphonoacetate hydrolase PhnA or rb0978 or smb21538 SWALL:Q92UV8 (EMBL:AL603645) (424 aa) fasta scores: E(): 1.7e-70, 46.42% id in 420 aa
NP_887559.1	Similar to Pseudomonas fluorescens positive transcriptional regulator PhnR SWALL:O69758 (EMBL:L49465) (299 aa) fasta scores: E(): 1.3e-57, 53.33% id in 285 aa, and to Agrobacterium tumefaciens transcriptional regulator, LysR-family atu4419 or agr_l_895 SWALL:Q8U7N0 (EMBL:AE009370) (306 aa) fasta scores: E(): 4.4e-28, 32.87% id in 292 aa
NP_887560.1	catalyzes the formation of L-proline from L-ornithine
NP_887561.1	Similar to Mycoplana ramosa acetylpolyamine aminohydrolase apha or apH SWALL:APHA_MYCRA (SWALL:Q48935) (341 aa) fasta scores: E(): 3.4e-49, 42.64% id in 340 aa, and to Rhizobium loti acetylpolyamine aminohydrolase mll0103 SWALL:Q98NK3 (EMBL:AP002994) (342 aa) fasta scores: E(): 7.8e-74, 54.3% id in 337 aa
NP_887562.1	Similar to Pseudomonas aeruginosa 3-isopropylmalate dehydrogenase LeuB or pa3118 SWALL:LEU3_PSEAE (SWALL:Q51375) (360 aa) fasta scores: E(): 5.9e-61, 48.09% id in 368 aa, and to Agrobacterium tumefaciens 3-isopropylmalate dehydrogenase LeuB or atu2791 or agr_c_5067 SWALL:LEU3_AGRT5 (SWALL:P24404) (370 aa) fasta scores: E(): 6e-62, 46.72% id in 366 aa
NP_887563.1	catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D
NP_887564.1	dehydratase, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate
NP_887565.1	Similar to Ralstonia solanacearum probable signal peptide protein rsc1198 or rs05730 SWALL:Q8Y046 (EMBL:AL646063) (349 aa) fasta scores: E(): 3.9e-52, 48.67% id in 339 aa, and to Brucella melitensis taurine-binding periplasmic protein precursor bmeii0963 SWALL:Q8YBD7 (EMBL:AE009729) (320 aa) fasta scores: E(): 6.3e-45, 42.35% id in 314 aa
NP_887566.1	Similar to Ralstonia solanacearum probable transmembrane permease ABC transporter protein rsc1200 or rs02669 SWALL:Q8Y044 (EMBL:AL646063) (263 aa) fasta scores: E(): 1.1e-60, 68.18% id in 242 aa, and to Brucella melitensis taurine transport permease tauc bmeii0962 SWALL:Q8YBD8 (EMBL:AE009729) (263 aa) fasta scores: E(): 4.1e-53, 57.76% id in 251 aa
NP_887567.1	Similar to Ralstonia solanacearum probable ATP-binding ABC transporter protein rsc1199 or rs02665 SWALL:Q8Y045 (EMBL:AL646063) (270 aa) fasta scores: E(): 1.7e-59, 67.17% id in 262 aa, and to Brucella melitensis taurine transport ATP-binding protein TauB bmeii0961 SWALL:Q8YBD9 (EMBL:AE009729) (281 aa) fasta scores: E(): 1.9e-46, 53.48% id in 258 aa
NP_887568.1	Similar to Pseudomonas aeruginosa probable transcriptional regulator pa0877 SWALL:Q9I568 (EMBL:AE004522) (298 aa) fasta scores: E(): 2e-34, 34.01% id in 294 aa, and to Brucella melitensis transcriptional regulatory protein, LysR-family bmeii1077 SWALL:Q8YB24 (EMBL:AE009740) (294 aa) fasta scores: E(): 5.6e-34, 34.12% id in 296 aa
NP_887569.1	Similar to Pseudomonas putida hypothetical 15.9 kDa protein SWALL:Q8VMK3 (EMBL:AJ344068) (138 aa) fasta scores: E(): 1.2e-23, 50.42% id in 117 aa, and to Rhizobium meliloti hypothetical protein rb0250 rb0250 or smb20260 SWALL:Q92WS9 (EMBL:AL603642) (130 aa) fasta scores: E(): 4.5e-18, 48.43% id in 128 aa
NP_887570.1	Similar to Bacillus subtilis probable acetyltransferase YdaF SWALL:P96579 (EMBL:AB001488) (183 aa) fasta scores: E(): 4e-08, 27.84% id in 176 aa, and to Staphylococcus aureus Mw0318 protein SWALL:BAB94183 (EMBL:AP004823) (181 aa) fasta scores: E(): 1.6e-12, 27.48% id in 171 aa
NP_887571.1	no significant database matches
NP_887572.1	Similar to Escherichia coli cyn operon transcriptional activator CynR or b0338 SWALL:CYNR_ECOLI (SWALL:P27111) (311 aa) fasta scores: E(): 7.6e-17, 30.16% id in 305 aa, and to Xylella fastidiosa oxidative stress transcriptional regulator xf1532 SWALL:Q9PD47 (EMBL:AE003983) (325 aa) fasta scores: E(): 3.9e-17, 29.54% id in 308 aa
NP_887573.1	Similar to Homo sapiens arylsulfatase a precursor ArsA SWALL:ARSA_HUMAN (SWALL:P15289) (507 aa) fasta scores: E(): 1.9e-42, 35.63% id in 449 aa, and to Rhizobium meliloti  arylsulfatase AslA1 or rb1214 or smb20915 SWALL:Q92UC0 (EMBL:AL603646) (537 aa) fasta scores: E(): 3.8e-36, 33.1% id in 438 aa
NP_887574.1	Similar to Rhizobium meliloti hypothetical protein Ra1058 or sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 2e-28, 33.12% id in 323 aa, and to Pseudomonas putida, and Pseudomonas sp. hypothetical 34.5 kDa protein in clcb-clcd intergenic region precursor SWALL:YCLC_PSEPU (SWALL:Q47100) (329 aa) fasta scores: E(): 5.1e-28, 35.39% id in 308 aa
NP_887575.1	Similar to Azorhizobium caulinodans Nac protein SWALL:O66393 (EMBL:AJ006238) (311 aa) fasta scores: E(): 3.3e-27, 33.97% id in 312 aa, and to Agrobacterium tumefaciens transcriptional regulator, LysR family Nac or atu4279 or agr_l_1169 SWALL:Q8U820 (EMBL:AE009356) (301 aa) fasta scores: E(): 1.7e-19, 27.74% id in 310 aa
NP_887576.1	Similar to Rhizobium meliloti hypothetical protein Ra1058 or sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 3.4e-43, 40.86% id in 323 aa, and to Comamonas testosteroni OrfJ protein SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 9.9e-38, 37.8% id in 328 aa
NP_887577.1	Similar to Clostridium thermosaccharolyticum crotonase crT SWALL:P97087 (EMBL:Z92974) (259 aa) fasta scores: E(): 4.8e-22, 31.87% id in 251 aa, and to Thermoanaerobacter tengcongensis enoyl-coa hydratase/carnithine racemase caid or tte0544 SWALL:Q8RC92 (EMBL:AE013024) (260 aa) fasta scores: E(): 1.5e-21, 31.87% id in 251 aa
NP_887578.1	Similar to Rhizobium meliloti hypothetical protein ra1058 or sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 9.8e-48, 45.06% id in 324 aa, and to Comamonas testosteroni OrfJ protein SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 1.3e-40, 40.74% id in 324 aa
NP_887579.1	Similar to Pseudomonas aeruginosa 3-hydroxyisobutyrate dehydrogenase MmsB or pa3569 SWALL:MMSB_PSEAE (SWALL:P28811) (298 aa) fasta scores: E(): 6.2e-21, 35.5% id in 276 aa, and to Rhizobium meliloti hypothetical protein rb1375 rb1375 or smb20668 SWALL:Q92TW9 (EMBL:AL603646) (301 aa) fasta scores: E(): 1.9e-34, 44.48% id in 290 aa
NP_887580.1	Similar to the N-terminal region of Rhodobacter sphaeroides molybdenum cofactor biosynthesis protein a moeA SWALL:Q9ZFA5 (EMBL:AF108766) (394 aa) fasta scores: E(): 0.47, 26.59% id in 282 aa
NP_887581.1	Similar to Escherichia coli 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase HpcH or HpaI SWALL:HPAI_ECOLI (SWALL:Q47098) (262 aa) fasta scores: E(): 8.6e-07, 26.93% id in 245 aa, and to Yersinia pestis 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase HpaI or ypo1767 SWALL:Q8ZFE7 (EMBL:AJ414150) (268 aa) fasta scores: E(): 3.7e-08, 28.76% id in 219 aa
NP_887582.1	Similar to Rhizobium meliloti hypothetical protein rb0380 or smb20394 SWALL:Q92WF9 (EMBL:AL603643) (442 aa) fasta scores: E(): 1e-47, 41.13% id in 440 aa, and to Rhizobium loti hypothetical protein Mll7005 SWALL:Q987L2 (EMBL:AP003010) (438 aa) fasta scores: E(): 2.1e-44, 39.41% id in 444 aa
NP_887583.1	Similar to Chlorobium limicola f.sp. thiosulfatophilum rubisco-like protein RbcL SWALL:Q9AMC5 (EMBL:AF326322) (434 aa) fasta scores: E(): 4.1e-40, 33.33% id in 408 aa, and to Rhizobium meliloti  ribulose bisphosphate carboxylaseoxygenase, large subunit protein rbcl or rb0379 or smb20393 SWALL:Q92WG0 (EMBL:AL603643) (418 aa) fasta scores: E(): 1.7e-61, 45.52% id in 413 aa
NP_887584.1	Similar to Pseudomonas syringae trpba operon transcriptional activator TrpI SWALL:TRPI_PSESY (SWALL:P34818) (298 aa) fasta scores: E(): 3.3e-37, 43.52% id in 301 aa, and to Pseudomonas aeruginosa trpba operon transcriptional activator TrpI or pa0037 SWALL:TRPI_PSEAE (SWALL:P11720) (295 aa) fasta scores: E(): 3.8e-37, 42.28% id in 298 aa
NP_887585.1	Similar to Pseudomonas aeruginosa probable transcriptional regulator pa3594 SWALL:Q9HY32 (EMBL:AE004780) (295 aa) fasta scores: E(): 2.4e-41, 44.56% id in 285 aa, and to Deinococcus radiodurans transcriptional regulator, LysR family dr0615 SWALL:Q9RWQ1 (EMBL:AE001919) (317 aa) fasta scores: E(): 2.2e-32, 38.48% id in 304 aa
NP_887586.1	Similar to Escherichia coli probable enoyl-CoA hydratase PaaF or b1393 SWALL:PAAF_ECOLI (SWALL:P76082) (255 aa) fasta scores: E(): 5e-20, 33.06% id in 245 aa, and to Bacillus halodurans enoyl CoA hydratase YngF or PhaA or bh0201 SWALL:Q9Z9V2 (EMBL:AB011837) (257 aa) fasta scores: E(): 4e-23, 31.78% id in 258 aa
NP_887587.1	Similar to Rhizobium meliloti hypothetical protein Ra1058 or Sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 1e-36, 39.29% id in 313 aa, and to Comamonas testosteroni OrfJ protein OrfJ SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 1.1e-31, 36.76% id in 321 aa
NP_887588.1	Similar to Acinetobacter sp. NCIMB9871 L-carnitine dehydrogenase Orf17 SWALL:Q93RL7 (EMBL:AB026669) (405 aa) fasta scores: E(): 2.9e-82, 53.13% id in 399 aa, and to Ralstonia solanacearum  transmembrane protein rsc0796 or rs05041 SWALL:Q8Y194 (EMBL:AL646061) (420 aa) fasta scores: E(): 2.2e-84, 55.77% id in 398 aa
NP_887589.1	Similar to Rhizobium meliloti  LysR type regulator ra0164 or sma0303 SWALL:Q930N1 (EMBL:AE007210) (292 aa) fasta scores: E(): 3.4e-18, 31.35% id in 287 aa, and to Xanthomonas campestris transcriptional regulator TrpI or xcc2544 SWALL:AAM41816 (EMBL:AE012366) (298 aa) fasta scores: E(): 5e-17, 32% id in 300 aa
NP_887590.1	Similar to Treponema hyodysenteriae periplasmic-iron-binding protein BitC SWALL:O54369 (EMBL:U75349) (339 aa) fasta scores: E(): 7.1e-28, 30.48% id in 328 aa, and to Agrobacterium tumefaciens ABC transporter substrate-binding protein atu4577 or agr_l_591 SWALL:Q8U777 (EMBL:AE009386) (387 aa) fasta scores: E(): 2.4e-26, 32.45% id in 302 aa
NP_887591.1	Similar to Agrobacterium tumefaciens ABC transporter nucleotide binding/ATPase AfuC or atu4786 or agr_l_193 SWALL:Q8U6M1 (EMBL:AE009407) (353 aa) fasta scores: E(): 1.6e-45, 50.92% id in 324 aa, and to Rhizobium meliloti  iron ABC transporter ATP-binding protein rb0349 or smb20363 SWALL:Q92WJ0 (EMBL:AL603643) (353 aa) fasta scores: E(): 2.9e-43, 49.68% id in 322 aa
NP_887592.1	Similar to Agrobacterium tumefaciens ABC transporter membrane spanning protein atu4579 or agr_l_586 SWALL:Q8U775 (EMBL:AE009386) (561 aa) fasta scores: E(): 3.9e-57, 32.1% id in 542 aa, and to Fusobacterium nucleatum iron fn0377 SWALL:Q8RGC7 (EMBL:AE010549) (550 aa) fasta scores: E(): 1.3e-49, 27.58% id in 551 aa
NP_887593.1	Similar to Rhizobium meliloti aspartate aminotransferase b AatB SWALL:AAB2_RHIME (SWALL:Q06191) (410 aa) fasta scores: E(): 5.4e-83, 54.14% id in 410 aa, and to Agrobacterium tumefaciens aspartate aminotransferase a AatA or atu2196 or agr_c_3991 SWALL:Q8UDD1 (EMBL:AE009170) (400 aa) fasta scores: E(): 1.2e-82, 55.44% id in 395 aa
NP_887594.1	Similar to Tetrahymena pyriformis phosphoenolpyruvate phosphomutase precursor PepM SWALL:PEPM_TETPY (SWALL:P33182) (300 aa) fasta scores: E(): 3e-38, 41.81% id in 287 aa, and to Mytilus edulis phosphoenolpyruvate phosphomutase SWALL:PEPM_MYTED (SWALL:P56839) (295 aa) fasta scores: E(): 4.8e-37, 42.7% id in 288 aa
NP_887595.1	Similar to Rhizobium meliloti hypothetical protein ra1058 or sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 4.8e-38, 39.29% id in 313 aa, and to Comamonas testosteroni OrfJ protein SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 4e-30, 32.4% id in 324 aa
NP_887596.1	Similar to Zymomonas mobilis gluconolactonase precursor Gnl SWALL:GNL_ZYMMO (SWALL:Q01578) (320 aa) fasta scores: E(): 0.0024, 29.85% id in 211 aa, and to Caulobacter crescentus gluconolactonase,  cc2128 SWALL:Q9A6G6 (EMBL:AE005885) (303 aa) fasta scores: E(): 2.4e-47, 47.36% id in 304 aa
NP_887597.1	Similar to Erwinia chrysanthemi AcsB SWALL:Q93AU1 (EMBL:AF416739) (258 aa) fasta scores: E(): 5.5e-19, 37.26% id in 212 aa, and to Ralstonia solanacearum probable aldolase rsp0423 or rs00880 SWALL:Q8XSP4 (EMBL:AL646078) (267 aa) fasta scores: E(): 2.8e-19, 39.13% id in 207 aa
NP_887598.1	Similar to Agrobacterium tumefaciens phosphoglycerate dehydrogenase SerA or atu5399 or agr_pat_578 SWALL:Q8UJS6 (EMBL:AE008961) (317 aa) fasta scores: E(): 2.2e-32, 41.33% id in 254 aa, and to Aeropyrum pernix 326aa long hypothetical formate dehydrogenase ape2507 SWALL:Q9Y8X7 (EMBL:AP000064) (326 aa) fasta scores: E(): 8e-30, 35.62% id in 320 aa
NP_887599.1	Similar to Escherichia coli alpha-ketoglutarate-dependent taurine dioxygenase TauD or SsiD or b0368 SWALL:TAUD_ECOLI (SWALL:P37610) (282 aa) fasta scores: E(): 5.9e-21, 32.5% id in 283 aa, and to Pseudomonas aeruginosa hypothetical protein Pa2310 pa2310 SWALL:Q9I1G5 (EMBL:AE004657) (295 aa) fasta scores: E(): 3.5e-30, 38.72% id in 297 aa
NP_887600.1	Similar to Escherichia coli transcriptional activator protein LysR or b2839 SWALL:LYSR_ECOLI (SWALL:P03030) (311 aa) fasta scores: E(): 2.3e-21, 33.21% id in 289 aa, and to Rhizobium loti transcriptional regulator mlr7023 SWALL:Q987J8 (EMBL:AP003010) (301 aa) fasta scores: E(): 4.8e-22, 32.74% id in 281 aa
NP_887601.1	Similar to Leptospira meyeri O-acetylhomoserine sulfhydrylase MetY SWALL:P94890 (EMBL:Y10744) (442 aa) fasta scores: E(): 4.1e-86, 55.58% id in 439 aa, and to Xanthomonas campestris homocysteine synthase pa5025 MetB or xcc3068 SWALL:AAM42339 (EMBL:AE012421) (428 aa) fasta scores: E(): 7.5e-129, 80.33% id in 422 aa
NP_887602.1	Similar to Legionella pneumophila Mip SWALL:Q53427 (EMBL:S71704) (184 aa) fasta scores: E(): 2.6e-06, 30.33% id in 178 aa, and to Pseudomonas aeruginosa hypothetical protein Pa0269 SWALL:Q9I6M1 (EMBL:AE004465) (145 aa) fasta scores: E(): 1.8e-07, 33.82% id in 136 aa
NP_887603.1	Similar to Rhizobium meliloti hypothetical protein rb1005 or smb21565 SWALL:Q92UT2 (EMBL:AL603645) (248 aa) fasta scores: E(): 2.5e-83, 80.32% id in 244 aa, and to Rhizobium loti hypothetical protein Mlr1911 SWALL:Q98JJ9 (EMBL:AP002998) (249 aa) fasta scores: E(): 3.1e-78, 74.69% id in 245 aa
NP_887604.1	Similar to Rhizobium loti transcriptional regulator mll7060 SWALL:Q987G6 (EMBL:AP003010) (230 aa) fasta scores: E(): 1.7e-20, 37.11% id in 194 aa, and to Acinetobacter calcoaceticus transcriptional repressor MdcY SWALL:Q9F0Q8 (EMBL:AF209728) (224 aa) fasta scores: E(): 7.2e-18, 32.82% id in 195 aa
NP_887605.1	Similar to Agrobacterium tumefaciens L-carnitine dehydratase CaiB or atu2127 or agr_c_3858 SWALL:Q8UDJ8 (EMBL:AE009163) (419 aa) fasta scores: E(): 1.3e-50, 40.31% id in 382 aa, and to Thermoplasma volcanium L-carnitine dehydratase tv1186 or tvg1215416 SWALL:Q979H5 (EMBL:AP000995) (399 aa) fasta scores: E(): 4.5e-48, 34.27% id in 388 aa
NP_887606.1	Similar to Pseudomonas stutzeri probable c4 dicarboxylate binding protein DctP SWALL:Q93JT7 (EMBL:AJ313422) (331 aa) fasta scores: E(): 3.9e-26, 32.68% id in 309 aa, and to Rhodobacter capsulatus c4-dicarboxylate-binding periplasmic protein precursor DctP SWALL:DCTP_RHOCA (SWALL:P37735) (333 aa) fasta scores: E(): 6.8e-26, 31.83% id in 333 aa
NP_887607.1	Similar to Wolinella succinogenes small integral C4-dicarboxylate membrane transport protein,  dctQ SWALL:Q9ZEJ3 (EMBL:AJ132740) (170 aa) fasta scores: E(): 7.2e-09, 27.27% id in 165 aa, and to Bacillus halodurans C4-dicarboxylate transport system bh2672 SWALL:Q9K9H5 (EMBL:AP001516) (183 aa) fasta scores: E(): 2.2e-08, 29.57% id in 142 aa
NP_887608.1	Similar to Pasteurella multocida hypothetical protein Pm0273 SWALL:Q9CNZ7 (EMBL:AE006062) (427 aa) fasta scores: E(): 2.8e-54, 40.09% id in 414 aa, and to Pseudomonas stutzeri probable c4-dicarboxylate transporter DctM SWALL:Q93JT5 (EMBL:AJ313422) (426 aa) fasta scores: E(): 2.1e-51, 40.53% id in 412 aa
NP_887609.1	Similar to Streptomyces coelicolor hypothetical protein sco2750 or scc57a.21C SWALL:Q9RDH7 (EMBL:AL136519) (287 aa) fasta scores: E(): 1.8e-10, 28.67% id in 265 aa, and to Agrobacterium tumefaciens hypothetical protein atu3118 or agr_l_3383 SWALL:Q8UB98 (EMBL:AE009242) (273 aa) fasta scores: E(): 1e-08, 31.42% id in 245 aa
NP_887610.1	Similar to Ralstonia metallidurans esterase estA SWALL:Q9RBF3 (EMBL:AJ251831) (275 aa) fasta scores: E(): 4.7e-14, 29.03% id in 279 aa, and to Pseudomonas sp. 3-oxoadipate enol-lactone hydrolase catD SWALL:Q8VPF0 (EMBL:AY044272) (262 aa) fasta scores: E(): 4.1e-13, 31.52% id in 276 aa
NP_887611.1	Similar to Micromonospora echinospora CalS9 SWALL:AAM70333 (EMBL:AF497482) (329 aa) fasta scores: E(): 9.8e-13, 40.65% id in 182 aa, and to Streptomyces griseus TDP-glucose-4,6-dehydratase homolog GrsE SWALL:Q9X5W0 (EMBL:AF128273) (324 aa) fasta scores: E(): 1.3e-12, 28.09% id in 331 aa
NP_887612.1	Similar to Rhizobium loti hypothetical protein Mll1137 SWALL:Q98L83 (EMBL:AP002996) (291 aa) fasta scores: E(): 4.5e-36, 41.55% id in 296 aa, and to Rhizobium meliloti hypothetical protein transmembrane rb0043 or smb20040 SWALL:Q92XB9 (EMBL:AL603642) (286 aa) fasta scores: E(): 5.1e-36, 42.1% id in 285 aa
NP_887613.1	Similar to Comamonas testosteroni OrfJ protein SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 9.6e-34, 35.86% id in 329 aa, and to Comamonas testosteroni Orf4 protein SWALL:Q9S155 (EMBL:AB024335) (325 aa) fasta scores: E(): 4e-31, 34.92% id in 315 aa
NP_887614.1	Similar to Pseudomonas aeruginosa probable aldehyde dehydrogenase pa3504 SWALL:Q9HYA5 (EMBL:AE004771) (494 aa) fasta scores: E(): 4e-65, 44.58% id in 471 aa, and to Rhizobium loti aldehyde dehydrogenase mll2319 SWALL:Q98IP1 (EMBL:AP002999) (498 aa) fasta scores: E(): 5.7e-63, 46.45% id in 480 aa
NP_887615.1	Similar to Rhizobium loti alcohol dehydrogenase mlr2604 SWALL:Q98I22 (EMBL:AP003000) (538 aa) fasta scores: E(): 3.2e-71, 39.51% id in 534 aa, and to Agrobacterium tumefaciens oxidoreductase, gmc family atu6063 or agr_pti_129 SWALL:Q8U672 (EMBL:AE009425) (541 aa) fasta scores: E(): 4.9e-71, 41.5% id in 530 aa
NP_887616.1	Similar to Yersinia pestis hypothetical protein Ypo3647 SWALL:Q8ZAY5 (EMBL:AJ414158) (275 aa) fasta scores: E(): 3.2e-49, 48.48% id in 264 aa, and to Rhizobium etli hypothetical protein yp053 SWALL:AAM54941 (EMBL:U80928) (169 aa) fasta scores: E(): 3.3e-27, 47.5% id in 160 aa
NP_887617.1	Similar to Bacillus subtilis  aliphatic sulfonates transport permease SsuC SWALL:SSUC_BACSU (SWALL:P40401) (276 aa) fasta scores: E(): 3.2e-39, 42.3% id in 260 aa, and to Agrobacterium tumefaciens ABC transporter membrane spanning protein SsuC or atu6057 or agr_pti_116 SWALL:Q8U678 (EMBL:AE009424) (313 aa) fasta scores: E(): 5.3e-54, 58.26% id in 242 aa
NP_887618.1	Similar to Pseudomonas putida AtsC SWALL:Q9WWU7 (EMBL:AF126201) (287 aa) fasta scores: E(): 4.9e-39, 51.02% id in 243 aa, and to Agrobacterium tumefaciens ABC transporter nucleotide binding/ATPase SsuB or atu6058 or agr_pti_117 SWALL:Q8U677 (EMBL:AE009424) (267 aa) fasta scores: E(): 1.6e-44, 56.91% id in 246 aa
NP_887619.1	Similar to Bacillus subtilis  aliphatic sulfonates binding protein precursor SsuA SWALL:SSUA_BACSU (SWALL:P40400) (332 aa) fasta scores: E(): 9.8e-19, 28.57% id in 301 aa, and to Agrobacterium tumefaciens ABC transporter substrate-binding protein ssua or atu6059 or agr_pti_119 SWALL:Q8U676 (EMBL:AE009424) (320 aa) fasta scores: E(): 1.1e-37, 36.62% id in 314 aa
NP_887620.1	Similar to Yersinia pestis  GntR-family transcriptional regulatory protein ypo3651 SWALL:Q8ZAY1 (EMBL:AJ414158) (220 aa) fasta scores: E(): 7.9e-24, 40.09% id in 222 aa, and to Rhizobium etli hypothetical protein yp052 SWALL:AAM54940 (EMBL:U80928) (229 aa) fasta scores: E(): 1.6e-27, 42.54% id in 228 aa
NP_887621.1	Similar to Acinetobacter calcoaceticus 4-carboxymuconolactone decarboxylase PcaC SWALL:DC4C_ACICA (SWALL:P20370) (134 aa) fasta scores: E(): 6.3e-18, 41.6% id in 125 aa, and to Rhizobium etli probable gamma-carboxymuconolactone decarboxylase PcaC1 SWALL:AAM54935 (EMBL:U80928) (158 aa) fasta scores: E(): 5.2e-27, 54.91% id in 122 aa
NP_887622.1	Similar to Mycobacterium tuberculosis hypothetical protein rv3510c or mtv023.17 or mt3614 SWALL:O53555 (EMBL:AL022022) (278 aa) fasta scores: E(): 2.9e-12, 27.08% id in 288 aa, and to Streptomyces griseus subsp. griseus NonC SWALL:Q9XDF3 (EMBL:AF074603) (317 aa) fasta scores: E(): 2.4e-09, 27.82% id in 248 aa
NP_887623.1	Similar to Sulfolobus solfataricus hypothetical protein sso2112 or c02006 SWALL:P95886 (EMBL:Y08256) (269 aa) fasta scores: E(): 8.8e-10, 28.57% id in 294 aa, and to Mycobacterium tuberculosis hypothetical protein rv2303c or mtcy339.06 or mt2360 SWALL:Q50662 (EMBL:Z77163) (307 aa) fasta scores: E(): 8.9e-16, 27.36% id in 296 aa
NP_887624.1	Similar to Rhizobium meliloti hypothetical protein ra1058 or sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 6.2e-47, 44.69% id in 311 aa, and to Agrobacterium tumefaciens hypothetical protein atu4727 or agr_l_312 SWALL:Q8U6S9 (EMBL:AE009401) (329 aa) fasta scores: E(): 8e-45, 43.12% id in 320 aa
NP_887625.1	Similar to Methanosarcina mazei hydrolase mm2650 SWALL:AAM32346 (EMBL:AE013511) (264 aa) fasta scores: E(): 1.4e-06, 24.4% id in 254 aa, and to Rhizobium etli hypothetical protein yp051 SWALL:AAM54939 (EMBL:U80928) (409 aa) fasta scores: E(): 2.6e-56, 43.6% id in 399 aa
NP_887626.1	Similar to Salmonella typhimurium, and Salmonella typhi SlsA or stm3761 or sty4025 SWALL:Q9Z622 (EMBL:AF106566) (226 aa) fasta scores: E(): 1.7e-73, 88.44% id in 225 aa, and to Salmonella typhi hypothetical protein Sty0948 SWALL:Q8Z819 (EMBL:AL627268) (225 aa) fasta scores: E(): 5.5e-74, 89.77% id in 225 aa
NP_887627.1	Similar to Yersinia pestis LysR family transcriptional regulatory protein ypo2150 SWALL:Q8ZEL4 (EMBL:AJ414151) (301 aa) fasta scores: E(): 3.4e-52, 48.33% id in 300 aa, and to Ralstonia solanacearum probable transcription regulator protein rsp0662 or rs01787 SWALL:Q8XS19 (EMBL:AL646080) (297 aa) fasta scores: E(): 2.2e-52, 49.66% id in 298 aa
NP_887628.1	Similar to Clostridium acetobutylicum nh2-acetyltransferase cap0111 SWALL:Q97TJ0 (EMBL:AE001438) (162 aa) fasta scores: E(): 1e-13, 33.33% id in 150 aa, and to Staphylococcus aureus hypothetical protein Mw2581 SWALL:BAB96446 (EMBL:AP004831) (166 aa) fasta scores: E(): 1.1e-11, 28.84% id in 156 aa
NP_887629.1	Similar to Ralstonia solanacearum hypothetical protein rsc1197 or rs05729 SWALL:Q8Y047 (EMBL:AL646063) (405 aa) fasta scores: E(): 2.1e-60, 44.78% id in 393 aa, and to Caulobacter crescentus hypothetical protein Cc3562 WALL:Q9A2J9 (EMBL:AE006014) (433 aa) fasta scores: E(): 2.5e-68, 47% id in 400 aa
NP_887630.1	Similar to Streptomyces coelicolor  transcriptional regulator sco3833 or sch69.03C SWALL:Q9XA31 (EMBL:AL079308) (209 aa) fasta scores: E(): 5e-10, 33.14% id in 181 aa, and to Azoarcus evansii  regulator SWALL:Q9FA56 (EMBL:AJ278756) (194 aa) fasta scores: E(): 5.5e-10, 28.93% id in 197 aa
NP_887631.1	Similar to Variovorax paradoxus, and Burkholderia cepacia 2,4-diphenoxyacetic acid gene cluster SWALL:Q9RHQ7 (EMBL:AB028643) (337 aa) fasta scores: E(): 1e-38, 39.55% id in 316 aa, and to Comamonas testosteroni OrfJ protein SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 1e-36, 40.37% id in 317 aa
NP_887632.1	Similar to Archaeoglobus fulgidus 3-ketoacyl-CoA thiolase af2416 SWALL:O30255 (EMBL:AE001108) (384 aa) fasta scores: E(): 1.7e-41, 39.39% id in 396 aa, and to Methanopyrus kandleri acetyl-CoA acetyltransferase mk1378 SWALL:Q8TVL1 (EMBL:AE010431) (394 aa) fasta scores: E(): 4.2e-39, 37.37% id in 388 aa
NP_887633.1	Similar to Pseudomonas putida Fadb1X SWALL:Q9AHX8 (EMBL:AF290950) (257 aa) fasta scores: E(): 1.7e-27, 39.53% id in 258 aa, and to Caulobacter crescentus enoyl-CoA hydratase cc0006 SWALL:Q9AC55 (EMBL:AE005675) (262 aa) fasta scores: E(): 1.1e-30, 44.48% id in 254 aa
NP_887634.1	Similar to Synechocystis sp. 3-oxoacyl-ACP reductase 1 FabG1 or slr0886 SWALL:FAG1_SYNY3 (SWALL:P73574) (247 aa) fasta scores: E(): 1.9e-23, 38.73% id in 253 aa, and to Anabaena sp. 3-oxoacyl-ACP reductase FabG or alr1894 SWALL:Q8YVT0 (EMBL:AP003587) (251 aa) fasta scores: E(): 1.3e-23, 36.61% id in 254 aa
NP_887635.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
NP_887636.1	Similar to Rhodococcus sp. AD45  racemase IsoG SWALL:Q9RBP6 (EMBL:AJ249207) (405 aa) fasta scores: E(): 8.5e-41, 35.42% id in 367 aa, and to Streptomyces coelicolor  racemase sco0362 or scf41.21 SWALL:Q9RJU8 (EMBL:AL117387) (403 aa) fasta scores: E(): 2.6e-36, 37.13% id in 377 aa
NP_887637.1	Similar to Pseudomonas aeruginosa probable transcriptional regulator pa1998 SWALL:Q9I2B1 (EMBL:AE004626) (306 aa) fasta scores: E(): 2.2e-18, 30.1% id in 289 aa, and to Rhizobium meliloti  transcriptional regulator protein rb0123 or smb20123 SWALL:Q92X39 (EMBL:AL603642) (298 aa) fasta scores: E(): 1.2e-20, 28.76% id in 292 aa
NP_887638.1	Similar to Rhizobium meliloti hypothetical protein ra1058 or sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 4.7e-37, 35.04% id in 331 aa, and to Xanthomonas axonopodis hypothetical protein Xac2278 SWALL:AAM37131 (EMBL:AE011865) (315 aa) fasta scores: E(): 5.6e-35, 37.07% id in 321 aa
NP_887639.1	Similar to Xanthomonas campestris hypothetical protein Xcc0756 SWALL:AAM40071 (EMBL:AE012175) (347 aa) fasta scores: E(): 8.9e-52, 47.46% id in 316 aa, and to Brucella melitensis hypothetical membrane spanning protein Bmeii0279 SWALL:Q8YD98 (EMBL:AE009666) (331 aa) fasta scores: E(): 6.9e-51, 45.79% id in 321 aa
NP_887640.1	Similar to Rhizobium loti hypothetical protein Mlr1489 SWALL:Q98KG3 (EMBL:AP002997) (159 aa) fasta scores: E(): 8.3e-12, 31.41% id in 156 aa, and to Pseudomonas aeruginosa hypothetical protein Pa5385 SWALL:Q9HTH9 (EMBL:AE004951) (159 aa) fasta scores: E(): 2.3e-09, 29.67% id in 155 aa
NP_887641.1	Similar to Rhizobium meliloti hypothetical protein ra1058 or sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 9.8e-50, 48.36% id in 306 aa, and to Comamonas testosteroni OrfJ protein SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 4.9e-42, 40.92% id in 303 aa
NP_887642.1	Similar to Pseudomonas aeruginosa probable transcriptional regulator pa3594 SWALL:Q9HY32 (EMBL:AE004780) (295 aa) fasta scores: E(): 9.1e-46, 48.74% id in 279 aa, and to Xanthomonas axonopodis transcriptional regulator LysR family xac0316 SWALL:AAM35208 (EMBL:AE011657) (295 aa) fasta scores: E(): 8e-32, 38.56% id in 293 aa
NP_887643.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa3592 SWALL:Q9HY34 (EMBL:AE004779) (395 aa) fasta scores: E(): 2.5e-81, 56.78% id in 361 aa, and to Rhizobium meliloti  conserved membrane-anchored protein rb0848 or smb21182 SWALL:Q92V66 (EMBL:AL603645) (394 aa) fasta scores: E(): 3.3e-52, 42.89% id in 359 aa
NP_887644.1	Similar to Pseudomonas aeruginosa probable acyl-CoA dehydrogenase pa3593 SWALL:Q9HY33 (EMBL:AE004779) (575 aa) fasta scores: E(): 5e-121, 59.77% id in 542 aa, and to Mycobacterium tuberculosis  acyl CoA dehydrogenase fade35 or rv3797 or mtv026.02 or mt3904 SWALL:O53577 (EMBL:AL022076) (593 aa) fasta scores: E(): 1.6e-47, 37.41% id in 564 aa
NP_887645.1	Similar to Rhizobium meliloti hypothetical protein ra1058 or sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 7.6e-39, 37.82% id in 312 aa, and to Comamonas testosteroni OrfJ protein SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 7e-38, 37.57% id in 322 aa; no significant database matches
NP_887646.1	P-type ATPase involved in magnesium influx
NP_887647.1	Similar to Brucella melitensis sensory transduction histidine kinase bmeii0052 SWALL:Q8YDX2 (EMBL:AE009643) (355 aa) fasta scores: E(): 9.4e-55, 51.19% id in 334 aa, and to Xanthomonas axonopodis nodulation protein NodV or xac2149 SWALL:AAM37002 (EMBL:AE011850) (457 aa) fasta scores: E(): 1.9e-60, 51.85% id in 351 aa
NP_887648.1	Similar to Xanthomonas axonopodis nodulation protein NodW or xac2150 SWALL:AAM37003 (EMBL:AE011850) (203 aa) fasta scores: E(): 2.3e-50, 70.64% id in 201 aa, and to Brucella melitensis nodulation protein bmeii0051 SWALL:Q8YDX3 (EMBL:AE009643) (212 aa) fasta scores: E(): 2.7e-42, 61.02% id in 195 aa
NP_887649.1	Similar to Rhizobium meliloti hypothetical protein ra1058 or sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 1.7e-37, 36.94% id in 314 aa, and to Comamonas testosteroni OrfJ protein SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 1e-36, 36.3% id in 325 aa; no significant database matches
NP_887650.1	Similar to Beta vulgaris choline monooxygenase, chloroplast precursor Cmo SWALL:CHMO_BETVU (SWALL:O22553) (446 aa) fasta scores: E(): 4.9e-26, 30.31% id in 376 aa, and to Suaeda liaotungensis choline monooxygenase Cmo SWALL:AAM43920 (EMBL:AF354442) (442 aa) fasta scores: E(): 3.6e-26, 30.25% id in 357 aa
NP_887651.1	Similar to Rhizobium loti hypothetical protein Mll9370 SWALL:Q981H8 (EMBL:AP003016) (399 aa) fasta scores: E(): 0.37, 26.56% id in 384 aa, and to Pseudomonas aeruginosa hypothetical protein Pa2597 SWALL:Q9I0P0 (EMBL:AE004688) (383 aa) fasta scores: E(): 1.6, 28.46% id in 260 aa
NP_887652.1	Similar to Rhodococcus erythropolis rhodocoxin ThcC SWALL:THCC_RHOER (SWALL:P43493) (106 aa) fasta scores: E(): 1.8e-12, 43.56% id in 101 aa, and to Corynebacterium glutamicum ferredoxin cgl0549 SWALL:BAB97942 (EMBL:AP005275) (106 aa) fasta scores: E(): 8.4e-13, 46.22% id in 106 aa
NP_887653.1	Similar to Pseudomonas putida putidaredoxin reductase CamA SWALL:CAMA_PSEPU (SWALL:P16640) (422 aa) fasta scores: E(): 8.9e-64, 49.26% id in 408 aa, and to Acinetobacter sp. EB104 ferredoxin reductase NonO SWALL:Q93SX2 (EMBL:AJ311718) (401 aa) fasta scores: E(): 3.3e-62, 50% id in 400 aa
NP_887654.1	Similar to Escherichia coli dihydrodipicolinate synthase DapA or b2478 SWALL:DAPA_ECOLI (SWALL:P05640) (292 aa) fasta scores: E(): 1.8e-23, 32.98% id in 285 aa, and to Xanthomonas axonopodis dihydroxydipicolinate synthase DapA or xac1760 SWALL:AAM36624 (EMBL:AE011807) (302 aa) fasta scores: E(): 7.7e-28, 40.22% id in 261 aa
NP_887655.1	Similar to Escherichia coli L-lactate dehydrogenase LldD or LctD or b3605 SWALL:LLDD_ECOLI (SWALL:P33232) (396 aa) fasta scores: E(): 1e-45, 38.56% id in 376 aa, and to Pseudomonas putida l MdlB SWALL:MDLB_PSEPU (SWALL:P20932) (393 aa) fasta scores: E(): 2.8e-62, 48.08% id in 391 aa
NP_887656.1	Similar to Bacillus halodurans hypothetical protein Bh2278 SWALL:YM78_BACHD (SWALL:Q9KAK9) (209 aa) fasta scores: E(): 2.3e-22, 38.07% id in 197 aa, and to Agrobacterium tumefaciens hypothetical protein atu5415 or agr_pat_605 SWALL:Q8UJR1 (EMBL:AE008962) (235 aa) fasta scores: E(): 4.6e-22, 35.46% id in 203 aa
NP_887657.1	Similar to Alcaligenes eutrophus hypothetical 30.8 kDa protein SWALL:Q9L789 (EMBL:AF225972) (279 aa) fasta scores: E(): 3.8e-36, 41.69% id in 259 aa, and to Ralstonia solanacearum probable transcription regulator protein rsc3411 or rs01720 SWALL:Q8XTY4 (EMBL:AL646075) (262 aa) fasta scores: E(): 5.9e-32, 39.76% id in 254 aa
NP_887658.1	Similar to Escherichia coli cyn operon transcriptional activator CynR or b0338 SWALL:CYNR_ECOLI (SWALL:P27111) (311 aa) fasta scores: E(): 1.2e-13, 28.91% id in 294 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa2206 SWALL:Q9I1R1 (EMBL:AE004647) (315 aa) fasta scores: E(): 1.1e-14, 27.33% id in 289 aa
NP_887659.1	Similar to Rhizobium loti probable short chain dehydrogenase mll1981 SWALL:Q98JE4 (EMBL:AP002998) (258 aa) fasta scores: E(): 7.9e-21, 39.83% id in 246 aa, and to Caulobacter crescentus oxidoreductase, short-chain dehydrogenase/reductase family cc2655 SWALL:Q9A514 (EMBL:AE005933) (267 aa) fasta scores: E(): 8.9e-22, 39.39% id in 264 aa
NP_887660.1	Similar to Alcaligenes eutrophus hypothetical 35.6 kDa protein in gbd 5'region precursor SWALL:YGB7_ALCEU (SWALL:Q44018) (327 aa) fasta scores: E(): 3.6e-39, 39.62% id in 318 aa, and to Comamonas testosteroni OrfJ protein SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 5.8e-25, 34.16% id in 281 aa
NP_887661.1	no significant database matches
NP_887662.1	Similar to Klebsiella pneumoniae nitrilase, bromoxynil-specific Bxn SWALL:NRLB_KLEPO (SWALL:P10045) (349 aa) fasta scores: E(): 4.4e-25, 34.5% id in 313 aa, and to Nicotiana tabacum nitrilase 4 Nit4 SWALL:NRL4_TOBAC (SWALL:Q42965) (349 aa) fasta scores: E(): 3.9e-68, 53.72% id in 309 aa
NP_887663.1	Similar to Streptomyces olivaceus ElmJ SWALL:Q9L4X8 (EMBL:AF263463) (143 aa) fasta scores: E(): 0.0082, 30.47% id in 105 aa, and to Xanthomonas campestris hypothetical protein Xcc2241 SWALL:AAM41520 (EMBL:AE012331) (135 aa) fasta scores: E(): 0.027, 33.01% id in 106 aa
NP_887664.1	Similar to Variovorax paradoxus, and Burkholderia cepacia 2,4-diphenoxyacetic acid gene cluster SWALL:Q9RHQ7 (EMBL:AB028643) (337 aa) fasta scores: E(): 1e-33, 37.83% id in 296 aa, and to Comamonas testosteroni Orf4 protein SWALL:Q9S155 (EMBL:AB024335) (325 aa) fasta scores: E(): 3.6e-32, 36.57% id in 309 aa
NP_887665.1	Similar to Bacillus subtilis als operon regulatory protein AlsR SWALL:ALSR_BACSU (SWALL:Q04778) (302 aa) fasta scores: E(): 5.4e-36, 36.36% id in 286 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa5029 SWALL:Q9HUE0 (EMBL:AE004916) (301 aa) fasta scores: E(): 1.7e-36, 40.34% id in 290 aa
NP_887666.1	Similar to Ralstonia solanacearum VsrD SWALL:Q45416 (EMBL:U18135) (210 aa) fasta scores: E(): 2.2e-29, 42.85% id in 210 aa, and to Ralstonia solanacearum response regulator transcription regulator protein VsrD or rsc0292 or rs03259 SWALL:Q8Y2P3 (EMBL:AL646058) (210 aa) fasta scores: E(): 2.5e-29, 42.85% id in 210 aa
NP_887669.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
NP_887670.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
NP_887671.1	activates fatty acids by binding to coenzyme A
NP_887690.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
NP_887705.1	ortholog of Bordetella pertussis (BX470248) BP2883
NP_887706.1	ortholog of Bordetella pertussis (BX470248) BP2882
NP_887707.1	ortholog of Bordetella pertussis (BX470248) BP2881
NP_887708.1	ortholog of Bordetella pertussis (BX470248) BP2880
NP_887709.1	ortholog of Bordetella pertussis (BX470248) BP2879
NP_887710.1	ortholog of Bordetella pertussis (BX470248) BP2878
NP_887711.1	ortholog of Bordetella pertussis (BX470248) BP2877
NP_887712.1	ortholog of Bordetella pertussis (BX470248) BP2875
NP_887713.1	catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine
NP_887714.1	ortholog of Bordetella pertussis (BX470248) BP2873
NP_887715.1	ortholog of Bordetella pertussis (BX470248) BP2872
NP_887716.1	ortholog of Bordetella pertussis (BX470248) BP2871
NP_887717.1	ortholog of Bordetella pertussis (BX470248) BP2870
NP_887718.1	ortholog of Bordetella pertussis (BX470248) BP2869
NP_887719.1	ortholog of Bordetella pertussis (BX470248) BP2868
NP_887720.1	ortholog of Bordetella pertussis (BX470248) BP2867
NP_887721.1	ortholog of Bordetella pertussis (BX470248) BP2866
NP_887722.1	ortholog of Bordetella pertussis (BX470248) BP2865
NP_887723.1	ortholog of Bordetella pertussis (BX470248) BP2864
NP_887724.1	ortholog of Bordetella pertussis (BX470248) BP2863
NP_887725.1	ortholog of Bordetella pertussis (BX470248) BP2862
NP_887726.1	ortholog of Bordetella pertussis (BX470248) BP2860
NP_887727.1	ortholog of Bordetella pertussis (BX470248) BP2859
NP_887728.1	catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate
NP_887749.1	Similar to Rhizobium meliloti hypothetical protein ra1150 or sma2109 SWALL:Q92XU0 (EMBL:AE007300) (308 aa) fasta scores: E(): 2e-76, 70% id in 290 aa, and to Methanosarcina mazei  nucleoside-diphosphate-sugar epimerase mm0150 SWALL:AAM29846 (EMBL:AE013236) (289 aa) fasta scores: E(): 8.1e-28, 32.75% id in 290 aa
NP_887750.1	Similar to Rhizobium meliloti probable GstR transcriptional regulator ra1149 or sma2107 SWALL:Q92XU1 (EMBL:AE007300) (301 aa) fasta scores: E(): 4.1e-82, 71.18% id in 295 aa, and to Synechocystis sp. transcriptional regulator slr1245 SWALL:P73778 (EMBL:D90909) (302 aa) fasta scores: E(): 1.8e-37, 37.5% id in 288 aa
NP_887751.1	no significant database matches
NP_887752.1	no significant database matches
NP_887764.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
NP_887769.1	no significant database matches
NP_887770.1	streptomycin 3'-adenyltransferase
NP_887796.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa0278 SWALL:Q9I6L2 (EMBL:AE004466) (250 aa) fasta scores: E(): 2.7e-37, 57.14% id in 238 aa, and to Rhizobium loti hypothetical protein Mll2193 SWALL:Q98IY4 (EMBL:AP002999) (249 aa) fasta scores: E(): 2.5e-35, 54.25% id in 247 aa
NP_887800.1	catalyzes the formation of inosine from adenosine
NP_887814.1	threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway
NP_887816.1	ortholog of Bordetella pertussis (BX470248) BP2946
NP_887817.1	ortholog of Bordetella pertussis (BX470248) BP2945
NP_887818.1	ortholog of Bordetella pertussis (BX470248) BP2944
NP_887819.1	ortholog of Bordetella pertussis (BX470248) BP2943
NP_887820.1	ortholog of Bordetella pertussis (BX470248) BP2942
NP_887821.1	ortholog of Bordetella pertussis (BX470248) BP2941
NP_887822.1	ortholog of Bordetella pertussis (BX470248) BP2940
NP_887823.1	ortholog of Bordetella pertussis (BX470248) BP2939
NP_887824.1	ortholog of Bordetella pertussis (BX470248) BP2938
NP_887825.1	ortholog of Bordetella pertussis (BX470248) BP2937
NP_887826.1	ortholog of Bordetella pertussis (BX470248) BP2936
NP_887827.1	ortholog of Bordetella pertussis (BX470248) BP2935
NP_887828.1	ortholog of Bordetella pertussis (BX470248) BP2934
NP_887829.1	ortholog of Bordetella pertussis (BX470248) BP2933
NP_887830.1	ortholog of Bordetella pertussis (BX470248) BP2932
NP_887831.1	ortholog of Bordetella pertussis (BX470248) BP2931
NP_887832.1	ortholog of Bordetella pertussis (BX470248) BP2930
NP_887833.1	ortholog of Bordetella pertussis (BX470248) BP2929
NP_887834.1	ortholog of Bordetella pertussis (BX470248) BP2928
NP_887835.1	ortholog of Bordetella pertussis (BX470248) BP2927
NP_887836.1	ortholog of Bordetella pertussis (BX470248) BP2926
NP_887837.1	ortholog of Bordetella pertussis (BX470248) BP2925
NP_887838.1	ortholog of Bordetella pertussis (BX470248) BP2924
NP_887839.1	ortholog of Bordetella pertussis (BX470248) BP2923
NP_887840.1	ortholog of Bordetella pertussis (BX470248) BP2922
NP_887841.1	ortholog of Bordetella pertussis (BX470248) BP2921
NP_887842.1	ortholog of Bordetella pertussis (BX470248) BP2920
NP_887843.1	ortholog of Bordetella pertussis (BX470248) BP2919
NP_887844.1	ortholog of Bordetella pertussis (BX470248) BP2918
NP_887845.1	ortholog of Bordetella pertussis (BX470248) BP2917
NP_887846.1	nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription
NP_887847.1	ortholog of Bordetella pertussis (BX470248) BP2915
NP_887848.1	ortholog of Bordetella pertussis (BX470248) BP2914
NP_887849.1	ortholog of Bordetella pertussis (BX470248) BP2913
NP_887850.1	ortholog of Bordetella pertussis (BX470248) BP2725
NP_887851.1	ortholog of Bordetella pertussis (BX470248) BP2726
NP_887852.1	ortholog of Bordetella pertussis (BX470248) BP2727
NP_887853.1	ortholog of Bordetella pertussis (BX470248) BP2728
NP_887854.1	ortholog of Bordetella pertussis (BX470248) BP2729
NP_887855.1	ortholog of Bordetella pertussis (BX470248) BP2730
NP_887856.1	ortholog of Bordetella pertussis (BX470248) BP2731
NP_887857.1	ortholog of Bordetella pertussis (BX470248) BP2732
NP_887866.1	involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth
NP_887869.1	catalyzes the oxidation of formate to carbon dioxide and hydrogen using NAD or NADP as the acceptor
NP_887870.1	ortholog of Bordetella pertussis (BX470248) BP2705
NP_887871.1	together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z
NP_887872.1	ortholog of Bordetella pertussis (BX470248) BP2707
NP_887873.1	ortholog of Bordetella pertussis (BX470248) BP2708
NP_887874.1	ortholog of Bordetella pertussis (BX470248) BP2709
NP_887875.1	ortholog of Bordetella pertussis (BX470248) BP2710
NP_887876.1	ortholog of Bordetella pertussis (BX470248) BP2711
NP_887877.1	ortholog of Bordetella pertussis (BX470248) BP2712
NP_887878.1	ortholog of Bordetella pertussis (BX470248) BP2713
NP_887879.1	ortholog of Bordetella pertussis (BX470248) BP2714
NP_887880.1	ortholog of Bordetella pertussis (BX470248) BP2715
NP_887881.1	ortholog of Bordetella pertussis (BX470248) BP2716
NP_887882.1	ortholog of Bordetella pertussis (BX470248) BP2717
NP_887883.1	ortholog of Bordetella pertussis (BX470248) BP2718
NP_887885.1	ortholog of Bordetella pertussis (BX470248) BP2719
NP_887886.1	ortholog of Bordetella pertussis (BX470248) BP2720
NP_887888.1	Catalyzes the conversion of citrate to isocitrate
NP_887898.1	ortholog of Bordetella pertussis (BX470248) BP1036
NP_887899.1	Transfers the fatty acyl group on membrane lipoproteins
NP_887900.1	ortholog of Bordetella pertussis (BX470248) BP1038
NP_887901.1	ortholog of Bordetella pertussis (BX470248) BP1039
NP_887902.1	ortholog of Bordetella pertussis (BX470248) BP1040
NP_887903.1	catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A)
NP_887904.1	ortholog of Bordetella pertussis (BX470248) BP1042
NP_887905.1	forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF
NP_887906.1	part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane
NP_887907.1	ortholog of Bordetella pertussis (BX470248) BP1047
NP_887908.1	Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr)
NP_887909.1	Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step
NP_887910.1	ortholog of Bordetella pertussis (BX470248) BP1051
NP_887911.1	Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate
NP_887912.1	ortholog of Bordetella pertussis (BX470248) BP1054
NP_887913.1	ortholog of Bordetella pertussis (BX470248) BP1055
NP_887914.1	ortholog of Bordetella pertussis (BX470248) BP1056
NP_887915.1	ortholog of Bordetella pertussis (BX470248) BP1057
NP_887916.1	ortholog of Bordetella pertussis (BX470248) BP1058
NP_887917.1	ortholog of Bordetella pertussis (BX470248) BP1059
NP_887918.1	ortholog of Bordetella pertussis (BX470248) BP1060
NP_887919.1	ortholog of Bordetella pertussis (BX470248) BP1061
NP_887920.1	ortholog of Bordetella pertussis (BX470248) BP1062
NP_887921.1	ortholog of Bordetella pertussis (BX470248) BP1063
NP_887922.1	NAD-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; does not decarboxylate oxaloacetate
NP_887923.1	ortholog of Bordetella pertussis (BX470248) BP1065
NP_887924.1	ortholog of Bordetella pertussis (BX470248) BP1066
NP_887925.1	in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase
NP_887926.1	catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase
NP_887927.1	ortholog of Bordetella pertussis (BX470248) BP1000
NP_887928.1	Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway
NP_887929.1	Catalyzes a key regulatory step in fatty acid biosynthesis
NP_887930.1	AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA
NP_887931.1	catalyzes the formation of acetyl phosphate from acetyl-CoA and phosphate; can also act with other short-chain acyl-CoAs
NP_887932.1	ortholog of Bordetella pertussis (BX470248) BP1005
NP_887933.1	ortholog of Bordetella pertussis (BX470248) BP1006
NP_887934.1	ortholog of Bordetella pertussis (BX470248) BP1008
NP_887935.1	ortholog of Bordetella pertussis (BX470248) BP1009
NP_887936.1	ortholog of Bordetella pertussis (BX470248) BP1010
NP_887937.1	ortholog of Bordetella pertussis (BX470248) BP1011
NP_887938.1	ortholog of Bordetella pertussis (BX470248) BP1012
NP_887939.1	ortholog of Bordetella pertussis (BX470248) BP1013
NP_887940.1	ortholog of Bordetella pertussis (BX470248) BP1013
NP_887941.1	ortholog of Bordetella pertussis (BX470248) BP1014
NP_887942.1	forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis
NP_887943.1	ortholog of Bordetella pertussis (BX470248) BP1016
NP_887944.1	ortholog of Bordetella pertussis (BX470248) BP1017
NP_887945.1	ortholog of Bordetella pertussis (BX470248) BP1018
NP_887946.1	stimulates the activities of the other two initiation factors, IF-2 and IF-3
NP_887947.1	ortholog of Bordetella pertussis (BX470248) BP1512
NP_887948.1	Catalyzes the reversible two-electron oxidation of formate to carbon dioxide. It allows the assimilation of carbon dioxide and provides energy for growth through oxidative phosphorylation coupled to the reduction of oxygen, nitrate, sulphate or fumarate
NP_887949.1	ortholog of Bordetella pertussis (BX470248) BP1514
NP_887950.1	ortholog of Bordetella pertussis (BX470248) BP1515
NP_887951.1	ortholog of Bordetella pertussis (BX470248) BP1516
NP_887952.1	ortholog of Bordetella pertussis (BX470248) BP1517
NP_887953.1	ortholog of Bordetella pertussis (BX470248) BP1518
NP_887954.1	class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis
NP_887955.1	ortholog of Bordetella pertussis (BX470248) BP1520
NP_887956.1	catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase
NP_887957.1	ortholog of Bordetella pertussis (BX470248) BP1522
NP_887958.1	ortholog of Bordetella pertussis (BX470248) BP1523
NP_887959.1	ortholog of Bordetella pertussis (BX470248) BP1524
NP_887960.1	ortholog of Bordetella pertussis (BX470248) BP1525
NP_887961.1	ortholog of Bordetella pertussis (BX470248) BP1526
NP_887962.1	With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway
NP_887963.1	ortholog of Bordetella pertussis (BX470248) BP1528
NP_887964.1	ortholog of Bordetella pertussis (BX470248) BP1529
NP_887965.1	ortholog of Bordetella pertussis (BX470248) BP1530
NP_887966.1	ortholog of Bordetella pertussis (BX470248) BP1531
NP_887967.1	ortholog of Bordetella pertussis (BX470248) BP1532
NP_887968.1	ortholog of Bordetella pertussis (BX470248) BP1533
NP_887969.1	ortholog of Bordetella pertussis (BX470248) BP1534
NP_887970.1	thiamine-pyrophosphate requiring enzyme
NP_887971.1	ortholog of Bordetella pertussis (BX470248) BP1536
NP_887972.1	ortholog of Bordetella pertussis (BX470248) BP1537
NP_887973.1	catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; also known as acetolactate synthase large subunit
NP_887974.1	ortholog of Bordetella pertussis (BX470248) BP1539
NP_887975.1	site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs
NP_887976.1	ortholog of Bordetella pertussis (BX470248) BP1541
NP_887977.1	ortholog of Bordetella pertussis (BX470248) BP1542
NP_887978.1	ortholog of Bordetella pertussis (BX470248) BP1543
NP_887979.1	ortholog of Bordetella pertussis (BX470248) BP1545
NP_887980.1	ortholog of Bordetella pertussis (BX470248) BP1545A
NP_887981.1	ortholog of Bordetella pertussis (BX470248) BP1546
NP_887982.1	ortholog of Bordetella pertussis (BX470248) BP1547
NP_887983.1	ortholog of Bordetella pertussis (BX470248) BP1548
NP_887984.2	catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA
NP_887985.1	ortholog of Bordetella pertussis (BX470248) BP1550
NP_887986.1	involved in a recombinational process of DNA repair, independent of the recBC complex
NP_887991.2	Maintains the balance of metabolites in the pentose-phosphate pathway
NP_887992.1	catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers
NP_887993.1	four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity
NP_887994.1	ortholog of Bordetella pertussis (BX470248) BP1454
NP_887995.1	ortholog of Bordetella pertussis (BX470248) BP1455
NP_887996.1	ortholog of Bordetella pertussis (BX470248) BP1456
NP_887997.1	ortholog of Bordetella pertussis (BX470248) BP1457
NP_887998.1	ortholog of Bordetella pertussis (BX470248) BP1458
NP_887999.1	ortholog of Bordetella pertussis (BX470248) BP2271
NP_888000.1	ortholog of Bordetella pertussis (BX470248) BP2269
NP_888001.1	ortholog of Bordetella pertussis (BX470248) BP2268
NP_888002.1	ortholog of Bordetella pertussis (BX470248) BP2267
NP_888003.1	ortholog of Bordetella pertussis (BX470248) BP1079
NP_888004.1	ortholog of Bordetella pertussis (BX470248) BP1078
NP_888005.1	ortholog of Bordetella pertussis (BX470248) BP1077
NP_888006.1	ortholog of Bordetella pertussis (BX470248) BP1076
NP_888007.1	catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
NP_888008.1	ortholog of Bordetella pertussis (BX470248) BP1074
NP_888009.1	ortholog of Bordetella pertussis (BX470248) BP1073
NP_888010.1	catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate
NP_888011.1	ortholog of Bordetella pertussis (BX470248) BP1071
NP_888012.1	ortholog of Bordetella pertussis (BX470248) BP1070
NP_888013.1	ortholog of Bordetella pertussis (BX470248) BP1069
NP_888014.1	ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation
NP_888015.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa1166 SWALL:Q9I4H1 (EMBL:AE004547) (262 aa) fasta scores: E(): 0.00026, 26.66% id in 240 aa, and to Methanosarcina acetivorans predicted protein ma0077 SWALL:Q8TUJ0 (EMBL:AE010664) (288 aa) fasta scores: E(): 0.0024, 28.37% id in 215 aa
NP_888016.1	Similar to Comamonas testosteroni OrfJ protein SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 6.2e-30, 35.43% id in 302 aa, and to Rhizobium meliloti hypothetical protein ra1058 or sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 5.6e-29, 33.33% id in 324 aa
NP_888017.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa1917 SWALL:Q9I2I7 (EMBL:AE004617) (115 aa) fasta scores: E(): 7.9e-16, 44.82% id in 116 aa, and to Rhizobium meliloti hypothetical protein ra1014 or sma1840 SWALL:Q92Y73 (EMBL:AE007287) (117 aa) fasta scores: E(): 5.4e-08, 39.08% id in 87 aa
NP_888018.1	Similar to Escherichia coli probable oxidoreductase OrdL or b1301 SWALL:ORDL_ECOLI (SWALL:P37906) (426 aa) fasta scores: E(): 2.8e-23, 30.66% id in 437 aa, and to Agrobacterium tumefaciens oxidoreductase OrdL or atu3404 or agr_l_2836 SWALL:Q8UAH0 (EMBL:AE009271) (424 aa) fasta scores: E(): 5.8e-34, 32.42% id in 404 aa
NP_888019.1	Similar to Brucella melitensis transcriptional regulator, MerR family bmeii0372 SWALL:Q8YD05 (EMBL:AE009674) (182 aa) fasta scores: E(): 1.2e-22, 41.37% id in 174 aa, and to Pseudomonas aeruginosa probable transcriptional regulator Pa5301 SWALL:Q9HTQ3 (EMBL:AE004943) (182 aa) fasta scores: E(): 4.6e-22, 39.2% id in 176 aa
NP_888057.1	Similar to Gluconobacter oxydans gluconate 5-dehydrogenase Gno SWALL:GNO_GLUOX (SWALL:P50199) (256 aa) fasta scores: E(): 3.4e-28, 38.61% id in 259 aa, and to Ralstonia solanacearum probable gluconate 5-dehydrogenase oxidoreductase IdnO or rsp0947 or rs05386 SWALL:Q8XRB1 (EMBL:AL646081) (258 aa) fasta scores: E(): 1.1e-30, 39.6% id in 250 aa
NP_888058.1	Similar to Acinetobacter sp. ADP1 DcaC SWALL:Q937T4 (EMBL:L05770) (253 aa) fasta scores: E(): 5.4e-33, 43.37% id in 249 aa, and to Rhizobium loti probable short chain dehydrogenase mll1036 SWALL:Q98LG1 (EMBL:AP002996) (268 aa) fasta scores: E(): 2.8e-39, 47.01% id in 251 aa
NP_888066.1	catalyzes the formation of pyruvate from 2,3-diaminopropionate
NP_888073.1	catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate
NP_888075.1	allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide
NP_888101.1	ortholog of Bordetella pertussis (BX470248) BP0872
NP_888102.1	catalyzes the S-adenosylmethionine-dependent transmethylation of thiopurine compounds; may be involved in selenium cycling by forming dimethylselenide and/or dimethyldiselenide
NP_888103.1	ortholog of Bordetella pertussis (BX470248) BP0874
NP_888104.1	ortholog of Bordetella pertussis (BX470248) BP0875
NP_888105.1	ortholog of Bordetella pertussis (BX470248) BP0876
NP_888106.1	ortholog of Bordetella pertussis (BX470248) BP0877
NP_888107.1	ortholog of Bordetella pertussis (BX470248) BP0878
NP_888108.1	ortholog of Bordetella pertussis (BX470248) BP0879
NP_888109.1	ortholog of Bordetella pertussis (BX470248) BP0880
NP_888110.1	ortholog of Bordetella pertussis (BX470248) BP0882
NP_888111.1	ortholog of Bordetella pertussis (BX470248) BP0883
NP_888112.1	ortholog of Bordetella pertussis (BX470248) BP0884
NP_888113.1	ortholog of Bordetella pertussis (BX470248) BP0885
NP_888114.1	ortholog of Bordetella pertussis (BX470248) BP0886
NP_888115.1	ortholog of Bordetella pertussis (BX470248) BP0887
NP_888116.1	ortholog of Bordetella pertussis (BX470248) BP0888
NP_888117.1	ortholog of Bordetella pertussis (BX470248) BP0889
NP_888118.1	ortholog of Bordetella pertussis (BX470248) BP0890
NP_888153.1	ortholog of Bordetella pertussis (BX470248) BP2265
NP_888154.1	ortholog of Bordetella pertussis (BX470248) BP2264
NP_888155.1	ortholog of Bordetella pertussis (BX470248) BP2263
NP_888156.1	ortholog of Bordetella pertussis (BX470248) BP2262
NP_888157.1	ortholog of Bordetella pertussis (BX470248) BP2261
NP_888158.1	ortholog of Bordetella pertussis (BX470248) BP2260
NP_888159.1	ortholog of Bordetella pertussis (BX470248) BP2259
NP_888160.1	ortholog of Bordetella pertussis (BX470248) BP2258
NP_888161.1	ortholog of Bordetella pertussis (BX470248) BP2257
NP_888162.1	ortholog of Bordetella pertussis (BX470248) BP2256
NP_888163.1	ortholog of Bordetella pertussis (BX470248) BP2255
NP_888164.1	ortholog of Bordetella pertussis (BX470248) BP2254
NP_888165.1	ortholog of Bordetella pertussis (BX470248) BP2253
NP_888166.1	ortholog of Bordetella pertussis (BX470248) BP2252
NP_888167.1	ortholog of Bordetella pertussis (BX470248) BP2251
NP_888168.1	ortholog of Bordetella pertussis (BX470248) BP2250
NP_888169.1	ortholog of Bordetella pertussis (BX470248) BP2249
NP_888170.1	ortholog of Bordetella pertussis (BX470248) BP2248
NP_888171.1	ortholog of Bordetella pertussis (BX470248) BP2247
NP_888172.1	ortholog of Bordetella pertussis (BX470248) BP2246
NP_888173.1	ortholog of Bordetella pertussis (BX470248) BP2245
NP_888174.1	ortholog of Bordetella pertussis (BX470248) BP2244
NP_888175.1	ortholog of Bordetella pertussis (BX470248) BP2243
NP_888176.1	ortholog of Bordetella pertussis (BX470248) BP2241
NP_888177.1	part of a set of proteins involved in the infection of eukaryotic cells; in plant pathogens involved in the hypersensitivity response
NP_888178.1	ortholog of Bordetella pertussis (BX470248) BP2239
NP_888179.1	ortholog of Bordetella pertussis (BX470248) BP2238
NP_888180.1	ortholog of Bordetella pertussis (BX470248) BP2237
NP_888181.1	ortholog of Bordetella pertussis (BX470248) BP2236
NP_888182.1	ortholog of Bordetella pertussis (BX470248) BP2235
NP_888183.1	ortholog of Bordetella pertussis (BX470248) BP2234
NP_888184.1	ortholog of Bordetella pertussis (BX470248) BP2233
NP_888185.1	ortholog of Bordetella pertussis (BX470248) BP2232
NP_888186.1	ortholog of Bordetella pertussis (BX470248) BP2231
NP_888187.1	ortholog of Bordetella pertussis (BX470248) BP2230
NP_888188.1	ortholog of Bordetella pertussis (BX470248) BP2229
NP_888189.1	ortholog of Bordetella pertussis (BX470248) BP2228
NP_888190.1	ortholog of Bordetella pertussis (BX470248) BP2227
NP_888191.1	ortholog of Bordetella pertussis (BX470248) BP2226
NP_888192.1	ortholog of Bordetella pertussis (BX470248) BP2225
NP_888193.1	Similar to Salmonella typhi  acetyltransferase YjaB or sty4399 SWALL:Q8Z1W2 (EMBL:AL627282) (145 aa) fasta scores: E(): 1.3e-30, 56.73% id in 141 aa, and to Escherichia coli hypothetical acetyltransferase YjaB or b4012 SWALL:YJAB_ECOLI (SWALL:P09163) (147 aa) fasta scores: E(): 6.1e-29, 54.67% id in 139 aa
NP_888194.1	ortholog of Bordetella pertussis (BX470248) BP2224
NP_888195.1	ortholog of Bordetella pertussis (BX470248) BP2222
NP_888196.1	ortholog of Bordetella pertussis (BX470248) BP1553
NP_888197.1	ortholog of Bordetella pertussis (BX470248) BP1554
NP_888198.1	ortholog of Bordetella pertussis (BX470248) BP1555
NP_888199.1	ortholog of Bordetella pertussis (BX470248) BP1556
NP_888200.1	ortholog of Bordetella pertussis (BX470248) BP1571
NP_888201.1	catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis
NP_888202.1	ortholog of Bordetella pertussis (BX470248) BP1569
NP_888203.1	ortholog of Bordetella pertussis (BX470248) BP1568
NP_888204.1	ortholog of Bordetella pertussis (BX470248) BP1567
NP_888205.1	This protein performs the mismatch recognition step during the DNA repair process
NP_888206.1	Similar to Bacteriophage HK022 integrase SWALL:AAF30377 (EMBL:AF069308) (357 aa) fasta scores: E(): 6.6e-11, 29.88% id in 338 aa, and to Escherichia coli O157:H7  integrase for cryptic prophage cp-933m z1323 or ecs1055 SWALL:Q8XD80 (EMBL:AE005287) (339 aa) fasta scores: E(): 3.1e-19, 29.32% id in 324 aa
NP_888207.1	no significant database matches
NP_888208.1	Similar to Xylella fastidiosa phage-related protein xf0485 SWALL:Q9PG17 (EMBL:AE003898) (181 aa) fasta scores: E(): 6.5e-16, 36.4% id in 206 aa, and to Sinorhizobium meliloti phage PBC5 hypothetical 28.0 kDa protein orf72 SWALL:Q8W6F5 (EMBL:AF448724) (246 aa) fasta scores: E(): 3.7e-14, 35.65% id in 244 aa
NP_888209.1	no significant database matches
NP_888210.1	no significant database matches
NP_888211.1	no significant database matches
NP_888212.1	no significant database matches
NP_888213.1	Similar to Bacteriophage phi-H cytosine methylase dcm5A SWALL:Q38204 (EMBL:X80164) (245 aa) fasta scores: E(): 3e-09, 30.7% id in 241 aa, and to Rhizobium loti modification methylase mlr8517 SWALL:Q982S6 (EMBL:AP003014) (667 aa) fasta scores: E(): 2.4e-41, 40.73% id in 680 aa
NP_888214.1	Similar to Neisseria gonorrhoeae DNA N-4 cytosine methyltransferase m.ngomxv SWALL:Q9AKV2 (EMBL:AJ004687) (153 aa) fasta scores: E(): 8.2e-28, 47.68% id in 151 aa, and to Salmonella typhi  methyltransferase sty1026 SWALL:Q8Z7X6 (EMBL:AL627268) (157 aa) fasta scores: E(): 1.2e-39, 60.25% id in 156 aa
NP_888215.1	no significant database matches
NP_888216.1	no significant database matches
NP_888217.1	no significant database matches
NP_888218.1	no significant database matches
NP_888219.1	Similar to Bacteriophage phiE125 Gp58 58 SWALL:Q8W6P2 (EMBL:AF447491) (273 aa) fasta scores: E(): 1.9e-39, 49.43% id in 267 aa, and to Chlamydia muridarum probable chromosome partitioning protein ParB or tc0060 SWALL:PARB_CHLMU (SWALL:Q9PLN9) (280 aa) fasta scores: E(): 0.00047, 25.68% id in 218 aa
NP_888220.1	no significant database matches
NP_888221.1	no significant database matches
NP_888222.1	no significant database matches
NP_888223.1	Similar to Bacteriophage HK97 prophage repressor CI SWALL:Q9MCQ2 (EMBL:AF069529) (237 aa) fasta scores: E(): 6e-08, 28.88% id in 225 aa, and to Bacteriophage P27 lambda repressor SWALL:Q8W648 (EMBL:AJ298298) (218 aa) fasta scores: E(): 4.7e-10, 32.9% id in 231 aa
NP_888224.1	Similar to Ralstonia solanacearum hypothetical protein rsc1675 rsc1675 or rs04063 SWALL:Q8XYT3 (EMBL:AL646065) (167 aa) fasta scores: E(): 0.009, 28.96% id in 145 aa
NP_888225.1	no significant database matches
NP_888226.1	no significant database matches
NP_888227.1	no significant database matches
NP_888228.1	no significant database matches
NP_888229.1	no significant database matches
NP_888230.1	no significant database matches
NP_888231.1	Similar to Bacteriophage D3 Orf76 orf76 SWALL:Q9MC52 (EMBL:AF165214) (169 aa) fasta scores: E(): 1.6e-09, 28.65% id in 171 aa
NP_888232.1	no significant database matches
NP_888233.1	Similar to Xylella fastidiosa hypothetical protein Xf1563 SWALL:Q9PD17 (EMBL:AE003986) (112 aa) fasta scores: E(): 3.9e-07, 50% id in 108 aa, and to Neisseria meningitidis hypothetical protein Nma1326 SWALL:Q9JUG2 (EMBL:AL162755) (100 aa) fasta scores: E(): 2.8e-05, 40.69% id in 86 aa
NP_888234.1	Similar to Xylella fastidiosa hypothetical protein Xf1562 SWALL:Q9PD18 (EMBL:AE003986) (88 aa) fasta scores: E(): 6.7e-16, 56.81% id in 88 aa, and to Synechocystis sp. hypothetical protein Sll1965 SWALL:P73378 (EMBL:D90905) (136 aa) fasta scores: E(): 1.5e-05, 38.37% id in 86 aa
NP_888235.1	no significant database matches
NP_888236.1	no significant database matches
NP_888237.1	Similar to Bacteriophage D3 terminase orf2 SWALL:Q9XJT6 (EMBL:AF165214) (563 aa) fasta scores: E(): 1e-25, 32.43% id in 592 aa, and to Bacteriophage P27 terminase SWALL:Q8W631 (EMBL:AJ298298) (570 aa) fasta scores: E(): 1.4e-28, 29.69% id in 586 aa
NP_888238.1	Similar to Bacteriophage D3 portal protein orf4 SWALL:Q9XJT5 (EMBL:AF165214) (434 aa) fasta scores: E(): 2.4e-69, 44.44% id in 414 aa, and to Bacteriophage HK97 portal protein 3 SWALL:VP3_BPHK7 (SWALL:P49859) (424 aa) fasta scores: E(): 1.5e-31, 31.68% id in 385 aa
NP_888239.1	Similar to Bacteriophage D3 ClpP protease orf5 SWALL:Q9XJT4 (EMBL:AF165214) (296 aa) fasta scores: E(): 1.8e-53, 54% id in 287 aa, and to Rhizobium loti hypothetical protein Mlr8523 SWALL:Q982R9 (EMBL:AP003014) (281 aa) fasta scores: E(): 1.5e-36, 44.77% id in 268 aa
NP_888240.1	Similar to Bacteriophage D3 major head protein orf6 SWALL:Q9XJT3 (EMBL:AF165214) (395 aa) fasta scores: E(): 7.8e-60, 46.58% id in 395 aa, and to Bacteriophage HK022 major capsid subunit precursor SWALL:AAF30357 (EMBL:AF069308) (385 aa) fasta scores: E(): 1.1e-49, 42.38% id in 394 aa
NP_888241.1	no significant database matches
NP_888242.1	Similar to Bacteriophage D3 Orf9 SWALL:Q9XJT1 (EMBL:AF165214) (106 aa) fasta scores: E(): 1.7e-16, 57.79% id in 109 aa
NP_888243.1	Similar to Bacteriophage D3 Orf10 SWALL:Q9XJT0 (EMBL:AF165214) (118 aa) fasta scores: E(): 7.7e-21, 49.19% id in 124 aa, and to Bacteriophage HK022 Gp9 SWALL:Q9MCV2 (EMBL:AF069308) (110 aa) fasta scores: E(): 0.37, 30.46% id in 128 aa
NP_888244.1	no significant database matches
NP_888245.1	no significant database matches
NP_888246.1	Similar to Bacteriophage D3 Orf15 orf15 SWALL:Q9MCA6 (EMBL:AF165214) (121 aa) fasta scores: E(): 2.8e-10, 37.6% id in 125 aa, and to Bacteriophage HK022 gp11 SWALL:Q9MCV0 (EMBL:AF069308) (121 aa) fasta scores: E(): 5.7e-08, 32.79% id in 125 aa
NP_888247.1	Similar to Bacteriophage D3 orf15 orf16 SWALL:Q9MCA5 (EMBL:AF165214) (173 aa) fasta scores: E(): 2.6e-07, 35.63% id in 174 aa, and to Pseudomonas aeruginosa vf2 protein or pa0633 SWALL:Q9R3G3 (EMBL:AB030825) (164 aa) fasta scores: E(): 4.6e-09, 32.53% id in 166 aa
NP_888248.1	no significant database matches
NP_888249.1	no significant database matches
NP_888250.1	no significant database matches
NP_888251.1	Similar to Escherichia coli O157:H7 minor tail protein precursor H or ecs2949 SWALL:Q9EYE1 (EMBL:AP000400) (881 aa) fasta scores: E(): 4.9e-18, 24.74% id in 885 aa, and to Salmonella typhimurium fels-1 prophage,  minor tail protein stm0918 SWALL:Q8ZQG3 (EMBL:AE008738) (1053 aa) fasta scores: E(): 6e-14, 22.86% id in 888 aa
NP_888252.1	no significant database matches
NP_888253.1	no significant database matches
NP_888254.1	no significant database matches
NP_888255.1	no significant database matches
NP_888256.1	no significant database matches
NP_888257.1	no significant database matches
NP_888258.1	no significant database matches
NP_888259.1	no significant database matches
NP_888260.1	no significant database matches
NP_888261.1	no significant database matches
NP_888262.1	Similar to Bacteriophage phiE125 gp33 33 SWALL:Q8W6R8 (EMBL:AF447491) (223 aa) fasta scores: E(): 8.8e-13, 34.73% id in 167 aa, and to Pseudomonas syringae pv. maculicola hypothetical 24.0 kDa protein SWALL:Q93TE6 (EMBL:AF359557) (213 aa) fasta scores: E(): 3.7e-36, 49.54% id in 218 aa
NP_888263.1	ortholog of Bordetella pertussis (BX470248) BP1565
NP_888264.1	ortholog of Bordetella pertussis (BX470248) BP1563
NP_888265.1	ortholog of Bordetella pertussis (BX470248) BP1562
NP_888266.1	ortholog of Bordetella pertussis (BX470248) BP1561
NP_888267.1	ortholog of Bordetella pertussis (BX470248) BP1560
NP_888268.1	ortholog of Bordetella pertussis (BX470248) BP1559
NP_888269.1	ortholog of Bordetella pertussis (BX470248) BP1558
NP_888270.1	ortholog of Bordetella pertussis (BX470248) BP1898
NP_888271.1	ortholog of Bordetella pertussis (BX470248) BP1899
NP_888272.1	ortholog of Bordetella pertussis (BX470248) BP1900
NP_888273.1	ortholog of Bordetella pertussis (BX470248) BP1901
NP_888274.1	ortholog of Bordetella pertussis (BX470248) BP1902; probable inositol monophosphatase
NP_888275.1	ortholog of Bordetella pertussis (BX470248) BP1903
NP_888276.1	BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell
NP_888277.1	catalyzes the formation of 2,3=diacylglucosamine 1-phosphate from UDP-2,3=diacylglucosamine
NP_888278.1	ortholog of Bordetella pertussis (BX470248) BP1906
NP_888279.1	ortholog of Bordetella pertussis (BX470248) BP1907
NP_888280.1	catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA
NP_888281.1	ortholog of Bordetella pertussis (BX470248) BP1909
NP_888282.1	catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein
NP_888283.1	ortholog of Bordetella pertussis (BX470248) BP1912
NP_888284.1	catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.
NP_888285.1	ortholog of Bordetella pertussis (BX470248) BP1915
NP_888286.1	ortholog of Bordetella pertussis (BX470248) BP1916
NP_888287.1	Converts (S)-3-hydroxyactk-CoA to 3-oxoayl-CoA
NP_888288.1	ortholog of Bordetella pertussis (BX470248) BP1918
NP_888289.1	ortholog of Bordetella pertussis (BX470248) BP1919
NP_888290.1	ortholog of Bordetella pertussis (BX470248) BP1920
NP_888291.1	ortholog of Bordetella pertussis (BX470248) BP1921
NP_888292.1	catalyzes the formation of L-aspartate to iminoaspartate in NAD(+) biosynthesis
NP_888293.1	ortholog of Bordetella pertussis (BX470248) BP1923
NP_888294.1	ortholog of Bordetella pertussis (BX470248) BP1924
NP_888295.1	ortholog of Bordetella pertussis (BX470248) BP1925
NP_888296.1	ortholog of Bordetella pertussis (BX470248) BP1926
NP_888297.1	ortholog of Bordetella pertussis (BX470248) BP1927
NP_888298.1	ortholog of Bordetella pertussis (BX470248) BP1928
NP_888299.1	ortholog of Bordetella pertussis (BX470248) BP1929
NP_888300.1	ortholog of Bordetella pertussis (BX470248) BP1930
NP_888301.1	ortholog of Bordetella pertussis (BX470248) BP1931
NP_888302.1	ortholog of Bordetella pertussis (BX470248) BP1932
NP_888303.1	ortholog of Bordetella pertussis (BX470248) BP1933
NP_888304.1	ortholog of Bordetella pertussis (BX470248) BP1934
NP_888305.1	ortholog of Bordetella pertussis (BX470248) BP1935
NP_888306.1	ortholog of Bordetella pertussis (BX470248) BP1936
NP_888307.1	ortholog of Bordetella pertussis (BX470248) BP1937
NP_888308.1	ortholog of Bordetella pertussis (BX470248) BP1938
NP_888309.1	ortholog of Bordetella pertussis (BX470248) BP1939
NP_888310.1	ortholog of Bordetella pertussis (BX470248) BP1940
NP_888311.1	ortholog of Bordetella pertussis (BX470248) BP1941
NP_888312.1	predicted polysaccharide polymerase involved in biofilm formation; required for the synthesis of the beta-1,6-N-acetylglucosamine polysaccharide; PgaC; in Yersinia the HmsR protein is an inner membrane protein
NP_888313.1	ortholog of Bordetella pertussis (BX470248) BP1943
NP_888314.1	ortholog of Bordetella pertussis (BX470248) BP1944
NP_888315.1	ortholog of Bordetella pertussis (BX470248) BP1945
NP_888316.1	ortholog of Bordetella pertussis (BX470248) BP1946
NP_888317.1	ortholog of Bordetella pertussis (BX470248) BP1948
NP_888318.1	ortholog of Bordetella pertussis (BX470248) BP1949
NP_888319.1	ortholog of Bordetella pertussis (BX470248) BP1950
NP_888320.1	ortholog of Bordetella pertussis (BX470248) BP1951
NP_888321.1	ortholog of Bordetella pertussis (BX470248) BP1952
NP_888322.1	ortholog of Bordetella pertussis (BX470248) BP1953
NP_888323.1	ortholog of Bordetella pertussis (BX470248) BP1954
NP_888324.1	ortholog of Bordetella pertussis (BX470248) BP1955
NP_888325.1	ortholog of Bordetella pertussis (BX470248) BP1956
NP_888326.1	ortholog of Bordetella pertussis (BX470248) BP1957
NP_888327.1	ortholog of Bordetella pertussis (BX470248) BP1958
NP_888328.1	ortholog of Bordetella pertussis (BX470248) BP1960
NP_888329.1	ortholog of Bordetella pertussis (BX470248) BP1961
NP_888330.1	ortholog of Bordetella pertussis (BX470248) BP1962
NP_888331.1	ortholog of Bordetella pertussis (BX470248) BP1963
NP_888332.1	ortholog of Bordetella pertussis (BX470248) BP1965
NP_888333.1	ortholog of Bordetella pertussis (BX470248) BP1966
NP_888336.1	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation
NP_888340.1	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation
NP_888341.1	functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA
NP_888344.1	ortholog of Bordetella pertussis (BX470248) BP1969
NP_888345.1	ortholog of Bordetella pertussis (BX470248) BP1970
NP_888346.1	ortholog of Bordetella pertussis (BX470248) BP1971
NP_888347.1	ortholog of Bordetella pertussis (BX470248) BP1972
NP_888348.1	ortholog of Bordetella pertussis (BX470248) BP1973
NP_888349.1	Modulates the activities of several enzymes which are inactive in their acetylated form
NP_888350.1	ortholog of Bordetella pertussis (BX470248) BP1975
NP_888351.1	ortholog of Bordetella pertussis (BX470248) BP1976
NP_888352.1	ortholog of Bordetella pertussis (BX470248) BP1977
NP_888353.1	ortholog of Bordetella pertussis (BX470248) BP1978
NP_888354.1	ortholog of Bordetella pertussis (BX470248) BP1979
NP_888355.1	ortholog of Bordetella pertussis (BX470248) BP1980
NP_888356.1	ortholog of Bordetella pertussis (BX470248) BP1981
NP_888357.1	ortholog of Bordetella pertussis (BX470248) BP1982
NP_888358.1	ortholog of Bordetella pertussis (BX470248) BP1983
NP_888359.1	ortholog of Bordetella pertussis (BX470248) BP1984
NP_888360.1	ortholog of Bordetella pertussis (BX470248) BP1985
NP_888361.1	ortholog of Bordetella pertussis (BX470248) BP1986
NP_888362.1	ortholog of Bordetella pertussis (BX470248) BP1987
NP_888363.1	ortholog of Bordetella pertussis (BX470248) BP1988
NP_888364.1	ortholog of Bordetella pertussis (BX470248) BP1989
NP_888365.1	ortholog of Bordetella pertussis (BX470248) BP1990
NP_888366.1	ortholog of Bordetella pertussis (BX470248) BP1991
NP_888367.1	ortholog of Bordetella pertussis (BX470248) BP1992
NP_888368.1	ortholog of Bordetella pertussis (BX470248) BP1993
NP_888369.1	ortholog of Bordetella pertussis (BX470248) BP1994
NP_888370.1	ortholog of Bordetella pertussis (BX470248) BP1995
NP_888371.1	ortholog of Bordetella pertussis (BX470248) BP1996
NP_888372.1	ortholog of Bordetella pertussis (BX470248) BP1997
NP_888373.1	ortholog of Bordetella pertussis (BX470248) BP1998
NP_888374.1	ortholog of Bordetella pertussis (BX470248) BP1999
NP_888375.1	ortholog of Bordetella pertussis (BX470248) BP2000
NP_888376.1	ortholog of Bordetella pertussis (BX470248) BP2001
NP_888377.1	ortholog of Bordetella pertussis (BX470248) BP2002
NP_888378.1	ortholog of Bordetella pertussis (BX470248) BP2003
NP_888379.1	ortholog of Bordetella pertussis (BX470248) BP2004
NP_888380.1	ortholog of Bordetella pertussis (BX470248) BP2005
NP_888381.1	ortholog of Bordetella pertussis (BX470248) BP2006
NP_888382.1	member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription
NP_888383.1	ortholog of Bordetella pertussis (BX470248) BP2008
NP_888384.1	ortholog of Bordetella pertussis (BX470248) BP2009
NP_888385.1	Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA
NP_888386.1	ortholog of Bordetella pertussis (BX470248) BP2011
NP_888387.1	ortholog of Bordetella pertussis (BX470248) BP2012
NP_888388.1	ortholog of Bordetella pertussis (BX470248) BP2013
NP_888389.1	catalyzes the conversion of citrate to isocitrate
NP_888390.1	ortholog of Bordetella pertussis (BX470248) BP2015
NP_888391.1	ortholog of Bordetella pertussis (BX470248) BP2016
NP_888392.1	ortholog of Bordetella pertussis (BX470248) BP2017
NP_888393.1	ortholog of Bordetella pertussis (BX470248) BP2019
NP_888394.1	ortholog of Bordetella pertussis (BX470248) BP2020
NP_888395.1	catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate
NP_888396.1	ortholog of Bordetella pertussis (BX470248) BP2022
NP_888397.1	ortholog of Bordetella pertussis (BX470248) BP2023
NP_888398.1	ortholog of Bordetella pertussis (BX470248) BP2024
NP_888399.1	unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity
NP_888400.1	ortholog of Bordetella pertussis (BX470248) BP2026
NP_888401.1	ortholog of Bordetella pertussis (BX470248) BP2027
NP_888402.1	ortholog of Bordetella pertussis (BX470248) BP2028
NP_888404.1	ortholog of Bordetella pertussis (BX470248) BP2029A
NP_888405.1	ortholog of Bordetella pertussis (BX470248) BP2030
NP_888406.1	ortholog of Bordetella pertussis (BX470248) BP2031
NP_888407.1	ortholog of Bordetella pertussis (BX470248) BP2032
NP_888408.1	ortholog of Bordetella pertussis (BX470248) BP2034
NP_888409.1	ortholog of Bordetella pertussis (BX470248) BP2315
NP_888410.1	Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell
NP_888411.1	SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA
NP_888412.1	ortholog of Bordetella pertussis (BX470248) BP2312
NP_888413.1	ortholog of Bordetella pertussis (BX470248) BP2311
NP_888414.1	catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis
NP_888415.1	catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis
NP_888416.1	ortholog of Bordetella pertussis (BX470248) BP2308
NP_888417.1	ortholog of Bordetella pertussis (BX470248) BP2307
NP_888418.1	ortholog of Bordetella pertussis (BX470248) BP2305
NP_888419.1	ortholog of Bordetella pertussis (BX470248) BP2304
NP_888420.1	ortholog of Bordetella pertussis (BX470248) BP2303
NP_888421.1	ortholog of Bordetella pertussis (BX470248) BP2302
NP_888422.1	allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide
NP_888423.1	ortholog of Bordetella pertussis (BX470248) BP2300
NP_888424.1	ortholog of Bordetella pertussis (BX470248) BP2299
NP_888425.1	ortholog of Bordetella pertussis (BX470248) BP2298
NP_888426.1	ortholog of Bordetella pertussis (BX470248) BP2296
NP_888427.1	ortholog of Bordetella pertussis (BX470248) BP2295
NP_888428.1	ortholog of Bordetella pertussis (BX470248) BP2294
NP_888429.1	ortholog of Bordetella pertussis (BX470248) BP2293
NP_888430.1	ortholog of Bordetella pertussis (BX470248) BP2292
NP_888431.1	ortholog of Bordetella pertussis (BX470248) BP2291
NP_888432.1	ortholog of Bordetella pertussis (BX470248) BP2290
NP_888433.1	ortholog of Bordetella pertussis (BX470248) BP2289
NP_888434.1	ortholog of Bordetella pertussis (BX470248) BP2287
NP_888435.1	ortholog of Bordetella pertussis (BX470248) BP2286
NP_888436.1	ortholog of Bordetella pertussis (BX470248) BP2285
NP_888437.1	ortholog of Bordetella pertussis (BX470248) BP2284
NP_888438.1	ortholog of Bordetella pertussis (BX470248) BP2283
NP_888439.1	metalloprotease
NP_888440.1	ortholog of Bordetella pertussis (BX470248) BP2281
NP_888441.1	ortholog of Bordetella pertussis (BX470248) BP2280
NP_888442.1	ortholog of Bordetella pertussis (BX470248) BP2279
NP_888443.1	ortholog of Bordetella pertussis (BX470248) BP2278
NP_888444.1	ortholog of Bordetella pertussis (BX470248) BP2277
NP_888445.1	ortholog of Bordetella pertussis (BX470248) BP2276
NP_888446.1	catalyzes the degradation of phosphonoacetaldehyde to acetaldehyde and phosphate
NP_888447.1	ortholog of Bordetella pertussis (BX470248) BP2274
NP_888448.1	ortholog of Bordetella pertussis (BX470248) BP2273
NP_888449.1	Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription
NP_888451.1	ortholog of Bordetella pertussis (BX470248) BP2804
NP_888452.1	ortholog of Bordetella pertussis (BX470248) BP2803
NP_888453.1	ortholog of Bordetella pertussis (BX470248) BP2802
NP_888454.1	ortholog of Bordetella pertussis (BX470248) BP2801
NP_888455.1	catalyzes the bidirectional exonucleolytic cleavage of DNA
NP_888456.1	ortholog of Bordetella pertussis (BX470248) BP2799
NP_888457.1	catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate
NP_888458.1	similar protein in Methanocaldococcus converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate as the first step in methanopterin biosynthesis
NP_888459.2	binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21
NP_888460.1	binds single-stranded DNA at the primosome assembly site
NP_888461.1	binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit
NP_888462.1	in Escherichia coli this protein is wrapped around the base of the L1 stalk
NP_888463.1	ortholog of Bordetella pertussis (BX470248) BP2792
NP_888464.1	unwinds double stranded DNA
NP_888465.1	ortholog of Bordetella pertussis (BX470248) BP2790
NP_888466.1	ortholog of Bordetella pertussis (BX470248) BP2789
NP_888467.1	ortholog of Bordetella pertussis (BX470248) BP2788
NP_888468.1	ortholog of Bordetella pertussis (BX470248) BP2787
NP_888469.1	ortholog of Bordetella pertussis (BX470248) BP2786
NP_888470.1	ortholog of Bordetella pertussis (BX470248) BP2785
NP_888471.1	catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine
NP_888472.1	catalyzes the formation of L-threonine from O-phospho-L-homoserine
NP_888473.1	ortholog of Bordetella pertussis (BX470248) BP2782
NP_888474.1	catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate
NP_888475.1	ortholog of Bordetella pertussis (BX470248) BP0869
NP_888476.1	ortholog of Bordetella pertussis (BX470248) BP0870
NP_888477.1	ortholog of Bordetella pertussis (BX470248) bph3
NP_888478.1	ortholog of Bordetella pertussis (BX470248) BP2910
NP_888479.1	ortholog of Bordetella pertussis (BX470248) BP2909
NP_888480.1	catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive
NP_888481.1	ortholog of Bordetella pertussis (BX470248) BP2907
NP_888482.1	ortholog of Bordetella pertussis (BX470248) BP2906
NP_888483.1	ortholog of Bordetella pertussis (BX470248) BP2905
NP_888484.1	ortholog of Bordetella pertussis (BX470248) BP2904
NP_888485.1	ortholog of Bordetella pertussis (BX470248) BP2903
NP_888486.1	ortholog of Bordetella pertussis (BX470248) BP2902
NP_888487.2	Fep; Cbt; Cbr; FeuB; FepA; PfeA; IroN; BfeA; outer membrane receptor of ferric enterobactin and colicins B and D; interacts with the TonB-ExbBD complex which catalyzes the translocation of the siderophore to the periplasmic space
NP_888488.1	ortholog of Bordetella pertussis (BX470248) BP2900
NP_888489.1	ortholog of Bordetella pertussis (BX470248) BP2899
NP_888490.1	ortholog of Bordetella pertussis (BX470248) BP2898
NP_888491.1	ortholog of Bordetella pertussis (BX470248) BP2897
NP_888492.1	ortholog of Bordetella pertussis (BX470248) BP2896
NP_888493.1	ortholog of Bordetella pertussis (BX470248) BP2895
NP_888494.1	ortholog of Bordetella pertussis (BX470248) BP2894
NP_888495.1	catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs
NP_888496.1	ortholog of Bordetella pertussis (BX470248) BP2892
NP_888497.1	ortholog of Bordetella pertussis (BX470248) BP2891
NP_888498.1	Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide
NP_888499.1	ortholog of Bordetella pertussis (BX470248) BP2889
NP_888500.1	ortholog of Bordetella pertussis (BX470248) BP2888
NP_888501.1	ortholog of Bordetella pertussis (BX470248) BP2887
NP_888502.1	ortholog of Bordetella pertussis (BX470248) BP2886
NP_888503.1	ortholog of Bordetella pertussis (BX470248) BP2885
NP_888504.1	ortholog of Bordetella pertussis (BX470248) BP3506
NP_888505.1	ortholog of Bordetella pertussis (BX470248) BP3507
NP_888506.1	ortholog of Bordetella pertussis (BX470248) BP3508
NP_888507.1	ortholog of Bordetella pertussis (BX470248) BP3509
NP_888508.1	ortholog of Bordetella pertussis (BX470248) BP3511
NP_888509.1	ortholog of Bordetella pertussis (BX470248) BP3512
NP_888510.1	ortholog of Bordetella pertussis (BX470248) BP3513
NP_888511.1	ortholog of Bordetella pertussis (BX470248) BP3514
NP_888512.1	ortholog of Bordetella pertussis (BX470248) BP3515
NP_888513.1	ortholog of Bordetella pertussis (BX470248) BP3517
NP_888514.1	ortholog of Bordetella pertussis (BX470248) BP3518
NP_888515.1	ortholog of Bordetella pertussis (BX470248) BP3521
NP_888516.1	ortholog of Bordetella pertussis (BX470248) BP3522
NP_888517.1	ortholog of Bordetella pertussis (BX470248) BP3523
NP_888518.1	ortholog of Bordetella pertussis (BX470248) BP3524
NP_888519.1	ortholog of Bordetella pertussis (BX470248) BP3525
NP_888520.1	ortholog of Bordetella pertussis (BX470248) BP3526
NP_888521.1	ortholog of Bordetella pertussis (BX470248) BP3527
NP_888522.1	ortholog of Bordetella pertussis (BX470248) BP3528
NP_888523.1	ortholog of Bordetella pertussis (BX470248) BP3529
NP_888524.1	ortholog of Bordetella pertussis (BX470248) BP3530
NP_888525.1	ortholog of Bordetella pertussis (BX470248) BP3531
NP_888526.1	ortholog of Bordetella pertussis (BX470248) BP3532
NP_888527.1	ortholog of Bordetella pertussis (BX470248) BP3533
NP_888528.1	ortholog of Bordetella pertussis (BX470248) BP3534
NP_888529.1	ortholog of Bordetella pertussis (BX470248) BP3535
NP_888530.1	ortholog of Bordetella pertussis (BX470248) BP3536
NP_888531.1	catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis
NP_888532.1	catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation
NP_888533.1	catalyzes the formation of N-acetyl-l-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine
NP_888534.1	ortholog of Bordetella pertussis (BX470248) BP3540
NP_888535.1	ortholog of Bordetella pertussis (BX470248) BP3541
NP_888536.1	ortholog of Bordetella pertussis (BX470248) BP3542
NP_888537.1	ortholog of Bordetella pertussis (BX470248) BP3543
NP_888538.1	ortholog of Bordetella pertussis (BX470248) BP3544
NP_888539.1	ortholog of Bordetella pertussis (BX470248) BP3545
NP_888540.1	ortholog of Bordetella pertussis (BX470248) BP3546
NP_888541.1	ortholog of Bordetella pertussis (BX470248) BP3547
NP_888542.1	ortholog of Bordetella pertussis (BX470248) BP2780
NP_888543.1	catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate
NP_888544.1	ortholog of Bordetella pertussis (BX470248) BP2775
NP_888545.1	cleaves 5-dehydro-4-deoxy-glucarate and 2-dehydro-3-deoxy-D-glucarate
NP_888546.1	binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase
NP_888547.1	ortholog of Bordetella pertussis (BX470248) BP2772
NP_888548.1	ortholog of Bordetella pertussis (BX470248) BP2771
NP_888549.1	ortholog of Bordetella pertussis (BX470248) BP2770
NP_888550.1	essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP
NP_888551.1	CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS
NP_888552.1	ortholog of Bordetella pertussis (BX470248) BP2767
NP_888553.1	transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate
NP_888554.1	ortholog of Bordetella pertussis (BX470248) BP2765
NP_888555.1	ortholog of Bordetella pertussis (BX470248) BP2764
NP_888556.1	bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides
NP_888557.1	ortholog of Bordetella pertussis (BX470248) BP2761
NP_888558.1	catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA
NP_888559.1	ortholog of Bordetella pertussis (BX470248) BP2758
NP_888560.1	ortholog of Bordetella pertussis (BX470248) BP2757
NP_888561.1	involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA
NP_888562.1	ortholog of Bordetella pertussis (BX470248) BP2755
NP_888563.1	ortholog of Bordetella pertussis (BX470248) BP2754
NP_888564.1	ortholog of Bordetella pertussis (BX470248) BP2753
NP_888565.1	ortholog of Bordetella pertussis (BX470248) BP2752
NP_888566.1	ortholog of Bordetella pertussis (BX470248) BP2751
NP_888567.1	ortholog of Bordetella pertussis (BX470248) BP2750
NP_888568.1	proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus; forms dimers and is a peripherally membrane-associated protein
NP_888569.1	ortholog of Bordetella pertussis (BX470248) BP2747
NP_888570.1	ortholog of Bordetella pertussis (BX470248) BP2746
NP_888571.1	ortholog of Bordetella pertussis (BX470248) BP2745
NP_888572.1	ortholog of Bordetella pertussis (BX470248) BP2744
NP_888573.1	ortholog of Bordetella pertussis (BX470248) BP2743
NP_888574.1	ortholog of Bordetella pertussis (BX470248) BP2742
NP_888575.1	ortholog of Bordetella pertussis (BX470248) BP2741
NP_888576.1	ortholog of Bordetella pertussis (BX470248) BP2738; bapc seems to undergo phase variation at a poly C
NP_888577.1	ortholog of Bordetella pertussis (BX470248) BP2737
NP_888578.1	ortholog of Bordetella pertussis (BX470248) BP2736
NP_888579.1	ortholog of Bordetella pertussis (BX470248) BP2735
NP_888580.1	ortholog of Bordetella pertussis (BX470248) BP2734
NP_888581.1	ortholog of Bordetella pertussis (BX470248) BP2576
NP_888582.1	binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit
NP_888583.2	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily
NP_888584.1	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily
NP_888585.1	This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control
NP_888586.1	ortholog of Bordetella pertussis (BX470248) BP2571
NP_888587.1	ortholog of Bordetella pertussis (BX470248) BP2570
NP_888588.1	ortholog of Bordetella pertussis (BX470248) BP2569
NP_888589.1	ortholog of Bordetella pertussis (BX470248) BP2583
NP_888590.1	ortholog of Bordetella pertussis (BX470248) BP2584
NP_888596.1	ortholog of Bordetella pertussis (BX470248) BP2581
NP_888597.1	ortholog of Bordetella pertussis (BX470248) BP2580
NP_888598.1	ortholog of Bordetella pertussis (BX470248) BP2567
NP_888599.1	ortholog of Bordetella pertussis (BX470248) BP2566
NP_888600.1	ortholog of Bordetella pertussis (BX470248) BP2565
NP_888601.1	ortholog of Bordetella pertussis (BX470248) BP2564
NP_888602.1	ortholog of Bordetella pertussis (BX470248) BP2563
NP_888603.2	catalyzes the conversion of carbamoyl phosphate and aspartate to form N-carbamoyl aspartate
NP_888604.1	Required for efficient pilin antigenic variation
NP_888605.1	ortholog of Bordetella pertussis (BX470248) BP2560
NP_888606.1	ortholog of Bordetella pertussis (BX470248) BP2559
NP_888607.1	ortholog of Bordetella pertussis (BX470248) BP2558
NP_888608.1	ortholog of Bordetella pertussis (BX470248) BP2557
NP_888609.1	ortholog of Bordetella pertussis (BX470248) BP2556
NP_888610.1	ortholog of Bordetella pertussis (BX470248) BP2555
NP_888611.1	ortholog of Bordetella pertussis (BX470248) BP2554
NP_888612.1	ortholog of Bordetella pertussis (BX470248) BP2553
NP_888613.1	ortholog of Bordetella pertussis (BX470248) BP2552
NP_888614.1	ortholog of Bordetella pertussis (BX470248) BP2551
NP_888615.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
NP_888616.1	ortholog of Bordetella pertussis (BX470248) BP2549
NP_888617.1	ortholog of Bordetella pertussis (BX470248) BP2548
NP_888618.1	ortholog of Bordetella pertussis (BX470248) BP2547
NP_888619.1	catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs
NP_888620.1	binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities
NP_888621.1	ortholog of Bordetella pertussis (BX470248) BP2544
NP_888622.1	catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine
NP_888623.1	ortholog of Bordetella pertussis (BX470248) BP2542
NP_888624.1	catalyzes the interconversion of succinyl-CoA and succinate
NP_888625.1	Catalyzes the only substrate-level phosphorylation in the TCA cycle
NP_888626.1	ortholog of Bordetella pertussis (BX470248) BP2539
NP_888627.1	ortholog of Bordetella pertussis (BX470248) BP2538
NP_888628.1	transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis
NP_888629.1	ortholog of Bordetella pertussis (BX470248) BP2536
NP_888630.1	ortholog of Bordetella pertussis (BX470248) BP2535
NP_888631.1	ortholog of Bordetella pertussis (BX470248) BP2534
NP_888632.1	ortholog of Bordetella pertussis (BX470248) BP2533
NP_888633.1	ortholog of Bordetella pertussis (BX470248) BP2532
NP_888634.1	ortholog of Bordetella pertussis (BX470248) BP2531
NP_888635.1	ortholog of Bordetella pertussis (BX470248) BP2530
NP_888636.1	ortholog of Bordetella pertussis (BX470248) BP2529
NP_888637.1	ortholog of Bordetella pertussis (BX470248) BP2528A
NP_888638.1	ortholog of Bordetella pertussis (BX470248) BP2528
NP_888639.1	ortholog of Bordetella pertussis (BX470248) BP2527
NP_888640.1	ortholog of Bordetella pertussis (BX470248) BP2526
NP_888641.1	ortholog of Bordetella pertussis (BX470248) BP2525A
NP_888642.1	ortholog of Bordetella pertussis (BX470248) BP2525
NP_888643.1	ortholog of Bordetella pertussis (BX470248) BP2524A+BP1081
NP_888644.1	ortholog of Bordetella pertussis (BX470248) BP1083
NP_888645.1	catalyzes the formation of O-phospho-L-homoserine from L-homoserine
NP_888646.1	ortholog of Bordetella pertussis (BX470248) BP1085
NP_888647.1	ortholog of Bordetella pertussis (BX470248) BP1087
NP_888648.1	ortholog of Bordetella pertussis (BX470248) BP1088
NP_888649.1	ortholog of Bordetella pertussis (BX470248) BP1089
NP_888650.1	ortholog of Bordetella pertussis (BX470248) BP1090
NP_888651.1	ortholog of Bordetella pertussis (BX470248) BP1091
NP_888652.1	ortholog of Bordetella pertussis (BX470248) BP1092
NP_888653.1	ortholog of Bordetella pertussis (BX470248) BP1460
NP_888654.1	catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis
NP_888655.1	ortholog of Bordetella pertussis (BX470248) BP1463
NP_888656.1	ortholog of Bordetella pertussis (BX470248) BP1464
NP_888657.1	ortholog of Bordetella pertussis (BX470248) BP1465
NP_888658.1	in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis
NP_888659.1	ortholog of Bordetella pertussis (BX470248) BP1467
NP_888660.1	ortholog of Bordetella pertussis (BX470248) BP1468
NP_888661.1	ortholog of Bordetella pertussis (BX470248) BP1469
NP_888662.1	ortholog of Bordetella pertussis (BX470248) BP1470
NP_888663.1	ortholog of Bordetella pertussis (BX470248) BP1471
NP_888664.1	ortholog of Bordetella pertussis (BX470248) BP1472
NP_888665.1	ortholog of Bordetella pertussis (BX470248) BP1473
NP_888666.1	ortholog of Bordetella pertussis (BX470248) BP1474
NP_888667.1	ortholog of Bordetella pertussis (BX470248) BP1475
NP_888668.1	ortholog of Bordetella pertussis (BX470248) BP1476
NP_888669.1	ortholog of Bordetella pertussis (BX470248) BP1477
NP_888670.1	ortholog of Bordetella pertussis (BX470248) BP1478
NP_888671.1	ortholog of Bordetella pertussis (BX470248) BP1479
NP_888672.1	ortholog of Bordetella pertussis (BX470248) BP1480
NP_888673.1	dehydratase, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate
NP_888674.2	catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D
NP_888675.1	catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis
NP_888676.1	catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde
NP_888677.1	ortholog of Bordetella pertussis (BX470248) BP1485
NP_888678.1	mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability
NP_888679.1	ortholog of Bordetella pertussis (BX470248) BP1487
NP_888680.1	ortholog of Bordetella pertussis (BX470248) BP1488
NP_888681.1	ortholog of Bordetella pertussis (BX470248) BP1489
NP_888682.1	catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis
NP_888688.1	porin involved in osmoregulation allowing water to move into and out of the cell in response to osmotic pressure
NP_888690.1	catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III
NP_888691.1	ortholog of Bordetella pertussis (BX470248) BP1495
NP_888692.1	ortholog of Bordetella pertussis (BX470248) BP1496
NP_888693.1	catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr)
NP_888694.1	IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits
NP_888695.1	catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione
NP_888696.1	ortholog of Bordetella pertussis (BX470248) BP1500
NP_888697.1	ortholog of Bordetella pertussis (BX470248) BP1501
NP_888698.1	ortholog of Bordetella pertussis (BX470248) BP1502
NP_888699.1	ortholog of Bordetella pertussis (BX470248) BP1503
NP_888700.1	ortholog of Bordetella pertussis (BX470248) BP1504
NP_888701.1	catalyzes the formation of L-proline from L-ornithine
NP_888702.1	ortholog of Bordetella pertussis (BX470248) BP1506
NP_888703.1	ortholog of Bordetella pertussis (BX470248) BP1507
NP_888704.1	ortholog of Bordetella pertussis (BX470248) BP1508
NP_888705.1	ortholog of Bordetella pertussis (BX470248) BP1509
NP_888706.1	ortholog of Bordetella pertussis (BX470248) BP1510
NP_888707.1	catalyzes the formation of dUMP from dUTP
NP_888708.1	ortholog of Bordetella pertussis (BX470248) BP2584A
NP_888709.1	ortholog of Bordetella pertussis (BX470248) BP2585
NP_888710.1	ortholog of Bordetella pertussis (BX470248) BP2586
NP_888711.1	ortholog of Bordetella pertussis (BX470248) BP1749
NP_888712.1	ortholog of Bordetella pertussis (BX470248) BP1750
NP_888713.1	catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine
NP_888714.1	lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis
NP_888715.1	IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme
NP_888716.1	catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities
NP_888717.1	glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate
NP_888718.1	ortholog of Bordetella pertussis (BX470248) BP1756
NP_888719.1	ortholog of Bordetella pertussis (BX470248) BP1757
NP_888720.1	ortholog of Bordetella pertussis (BX470248) BP1758
NP_888721.1	ortholog of Bordetella pertussis (BX470248) BP1759
NP_888722.1	ortholog of Bordetella pertussis (BX470248) BP1760
NP_888723.1	ortholog of Bordetella pertussis (BX470248) BP1761
NP_888724.1	involved in methylation of ribosomal protein L3
NP_888725.1	dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.
NP_888726.1	catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway
NP_888727.1	catalyzes the formation of succinyldiaminopimelate from N-succinyl-2-amino-6-ketopimelate
NP_888728.1	Similar to Ralstonia solanacearum probable integrase/recombinase rsc1655 or rs03938 SWALL:Q8XYV1 (EMBL:AL646065) (334 aa) fasta scores: E(): 6.7e-47, 43.88% id in 335 aa, and to Pasteurella multocida integrase/recombinase rcI SWALL:Q9L6A5 (EMBL:AF237934) (329 aa) fasta scores: E(): 1.3e-36, 37.34% id in 332 aa
NP_888729.1	Similar to Vibrio cholerae transcriptional regulator vc0497 SWALL:Q9KUL8 (EMBL:AE004136) (66 aa) fasta scores: E(): 0.032, 28.57% id in 63 aa
NP_888730.1	no significant database matches
NP_888731.1	Similar to Bacteriophage Mx8 hypothetical 25.3 kDa protein SWALL:O03965 (EMBL:U64984) (222 aa) fasta scores: E(): 0.00013, 42.54% id in 228 aa, and to Xylella fastidiosa phage-related protein xf0485 SWALL:Q9PG17 (EMBL:AE003898) (181 aa) fasta scores: E(): 0.0047, 37.73% id in 212 aa
NP_888732.1	no significant database matches
NP_888733.1	no significant database matches
NP_888734.1	Similar to Bacteriophage VT2-Sa ExOnuclease exO SWALL:Q9T1N7 (EMBL:AP000363) (226 aa) fasta scores: E(): 1.4e-11, 31.06% id in 206 aa, and to Escherichia coli O157:H7 exonuclease exo or ecs1174 SWALL:Q9KXG3 (EMBL:AP000422) (226 aa) fasta scores: E(): 1.2e-11, 31.06% id in 206 aa
NP_888735.1	Similar to Escherichia coli rect protein RecT or b1349 SWALL:RECT_ECOLI (SWALL:P33228) (269 aa) fasta scores: E(): 8e-10, 30.51% id in 213 aa, and to Proteus vulgaris DNA recombination protein orf223 SWALL:BAB93785 (EMBL:AP004237) (510 aa) fasta scores: E(): 7.8e-13, 31.74% id in 315 aa
NP_888736.1	no significant database matches
NP_888737.1	no significant database matches
NP_888738.1	no significant database matches
NP_888739.1	no significant database matches
NP_888740.1	no significant database matches
NP_888741.1	Similar to Bacteriophage 933W, and Stx2 converting bacteriophage I hypothetical 39.1 kDa protein l0095 SWALL:Q9T208 (EMBL:AF125520) (349 aa) fasta scores: E(): 1.5e-57, 51.17% id in 342 aa, and to Escherichia coli O157:H7 hypothetical protein Z1456 SWALL:Q8X497 (EMBL:AE005296) (347 aa) fasta scores: E(): 1.5e-57, 51.17% id in 342 aa
NP_888742.1	Similar to Bacteriophage D3 repressor protein CI SWALL:RPC1_BPD3 (SWALL:Q37906) (223 aa) fasta scores: E(): 1.1e-05, 28.67% id in 143 aa, and to Neisseria meningitidis  regulator nma1884 SWALL:Q9JTC1 (EMBL:AL162757) (234 aa) fasta scores: E(): 3.9e-06, 28.72% id in 188 aa
NP_888743.1	no significant database matches
NP_888744.1	no significant database matches
NP_888745.1	no significant database matches
NP_888746.1	no significant database matches
NP_888747.1	Similar to Ralstonia solanacearum hypothetical protein rsc1905 or rs03473 SWALL:Q8XY58 (EMBL:AL646067) (57 aa) fasta scores: E(): 0.00041, 39.62% id in 53 aa
NP_888748.1	Similar to Bacteriophage lambda protein NinB SWALL:NINB_LAMBD (SWALL:P03765) (146 aa) fasta scores: E(): 1.5e-09, 34.92% id in 126 aa, and to Yersinia pestis phage protein NinB or ypo2089 SWALL:Q8ZER6 (EMBL:AJ414151) (142 aa) fasta scores: E(): 2.1e-12, 47.17% id in 106 aa
NP_888749.1	Similar to Bacteriophage T7 hypothetical gene 7.7 protein 7.7 SWALL:Y77_BPT7 (SWALL:P03796) (130 aa) fasta scores: E(): 1.6e-11, 34.32% id in 134 aa, and to Ralstonia solanacearum  bacteriophage-related protein rsc3236 or rs02453 SWALL:Q8XUF2 (EMBL:AL646074) (183 aa) fasta scores: E(): 1e-15, 41.06% id in 151 aa
NP_888750.1	Similar to Bacteriophage phiE125 gp63 63 SWALL:Q8W6N7 (EMBL:AF447491) (112 aa) fasta scores: E(): 6.7e-12, 45.09% id in 102 aa, and to Escherichia coli, and Bacteriophage 82 hypothetical protein ybco in lambdoid dlp12 prophage region ybco or b0549 SWALL:YBCO_ECOLI (SWALL:Q47271) (96 aa) fasta scores: E(): 0.73, 37.66% id in 77 aa
NP_888751.1	Similar to Salmonella typhi hypothetical protein Sty2063 SWALL:Q8Z5Z8 (EMBL:AL627272) (262 aa) fasta scores: E(): 1.5e-07, 24.43% id in 266 aa, and to Escherichia coli O157:H7 hypothetical protein z2397 z2397 or ecs1944 SWALL:Q8X8R8 (EMBL:AE005370) (262 aa) fasta scores: E(): 1.7e-06, 25.46% id in 267 aa
NP_888752.1	no significant database matches
NP_888753.1	no significant database matches
NP_888754.1	Similar to bacteriophage WO hypothetical 16.7 kDa protein gp11 SWALL:Q9JMN0 (EMBL:AB036666) (151 aa) fasta scores: E(): 1.7e-13, 36.61% id in 142 aa, and to Ralstonia solanacearum  bacteriophage-related protein rsc3228 or rs02445 SWALL:Q8XUG0 (EMBL:AL646074) (154 aa) fasta scores: E(): 1.1e-21, 46.35% id in 151 aa
NP_888755.1	no significant database matches
NP_888756.1	no significant database matches
NP_888757.1	Similar to Lactobacillus delbrueckii  DNA binding protein SWALL:Q8VN11 (EMBL:AJ421486) (112 aa) fasta scores: E(): 0.0039, 31.81% id in 88 aa
NP_888758.1	Similar to Bacillus subtilis PbsX phage terminase large subunit XtmB SWALL:XTMB_BACSU (SWALL:P39786) (433 aa) fasta scores: E(): 0.2, 21.58% id in 417 aa, and to Yersinia pestis hypothetical 47.8 kDa protein y1030 or ypmt1.24C SWALL:O68741 (EMBL:AF074611) (418 aa) fasta scores: E(): 2.8e-17, 27.75% id in 436 aa
NP_888759.1	Similar to Bacteriophage MB78 60 kDa protein gp62 SWALL:Q9T0Q3 (EMBL:Y19202) (540 aa) fasta scores: E(): 2.1e-31, 31.2% id in 455 aa
NP_888760.1	Similar to bacteriophage phi ETA orf42 SWALL:Q9G003 (EMBL:AP001553) (320 aa) fasta scores: E(): 0.89, 23.1% id in 264 aa, and to Yersinia pestis hypothetical phage protein Ypo2108 ypo2108 SWALL:Q8ZEQ2 (EMBL:AJ414151) (370 aa) fasta scores: E(): 4.2e-52, 43.17% id in 359 aa
NP_888761.1	no significant database matches
NP_888762.1	no significant database matches
NP_888763.1	Similar to Yersinia pestis  phage protein ypo2110 SWALL:Q8ZEQ0 (EMBL:AJ414151) (401 aa) fasta scores: E(): 1.1e-09, 27.98% id in 318 aa; no significant database matches
NP_888764.1	no significant database matches
NP_888765.1	Similar to Yersinia pestis hypothetical phage protein Ypo2111 SWALL:Q8ZEP9 (EMBL:AJ414151) (176 aa) fasta scores: E(): 4.1, 26.94% id in 167 aa
NP_888766.1	no significant database matches
NP_888767.1	Similar to Rhizobium loti hypothetical protein Mlr8012 SWALL:Q984G8 (EMBL:AP003013) (130 aa) fasta scores: E(): 6.8, 26.82% id in 123 aa
NP_888768.1	Weakly similar to Yersinia pestis hypothetical phage protein Ypo2114 SWALL:Q8ZEP6 (EMBL:AJ414151) (194 aa) fasta scores: E(): 1.8e-08, 36.93% id in 111 aa
NP_888769.1	Similar to Yersinia pestis hypothetical phage protein Ypo2115 SWALL:Q8ZEP5 (EMBL:AJ414151) (135 aa) fasta scores: E(): 5.8e-10, 34.58% id in 133 aa, and to Rhizobium loti hypothetical protein Mlr8015 SWALL:Q984G5 (EMBL:AP003013) (137 aa) fasta scores: E(): 8.8e-06, 33.91% id in 115 aa
NP_888770.1	Similar to Bacteriophage phiYeO3-12  1.45 protein 1.45 SWALL:Q9T140 (EMBL:AJ251805) (157 aa) fasta scores: E(): 2.6e-06, 36.06% id in 122 aa, and to Escherichia coli O157:H7 hypothetical protein z3935 z3935 or ecs3504 SWALL:Q8X989 (EMBL:AE005493) (201 aa) fasta scores: E(): 2.1e-14, 37.5% id in 144 aa
NP_888771.1	Similar to Ralstonia solanacearum hypothetical protein rsc1689 or rs04083 SWALL:Q8XYR9 (EMBL:AL646065) (217 aa) fasta scores: E(): 4.3e-22, 41.07% id in 168 aa
NP_888772.1	Similar to Yersinia pestis hypothetical phage protein Ypo2117 SWALL:Q8ZEP3 (EMBL:AJ414151) (103 aa) fasta scores: E(): 2.7e-07, 36.79% id in 106 aa
NP_888773.1	Similar to Yersinia pestis hypothetical phage protein Ypo2118 SWALL:Q8ZEP2 (EMBL:AJ414151) (73 aa) fasta scores: E(): 1.3e-08, 52.05% id in 73 aa
NP_888774.1	Similar to Ralstonia solanacearum probable phage hk97 tail length tape measure-related protein rsc1690 or rs04085 SWALL:Q8XYR8 (EMBL:AL646065) (957 aa) fasta scores: E(): 1.4e-47, 35.26% id in 913 aa, and to Bacteriophage N15 gp16 gene 16 SWALL:O64330 (EMBL:AF064539) (838 aa) fasta scores: E(): 1.2e-28, 28.1% id in 861 aa
NP_888775.1	Similar to Bacteriophage D3 Orf21 SWALL:Q9MCA0 (EMBL:AF165214) (159 aa) fasta scores: E(): 0.00045, 31.37% id in 102 aa
NP_888776.1	Similar to Bacteriophage D3 Orf22 SWALL:Q9MC99 (EMBL:AF165214) (163 aa) fasta scores: E(): 0.1, 25.43% id in 173 aa
NP_888777.1	Similar to Bacteriophage D3 Orf25 SWALL:Q9MC96 (EMBL:AF165214) (135 aa) fasta scores: E(): 0.00047, 30.46% id in 128 aa
NP_888778.1	Weakly similar to Bacteriophage D3 Orf26 orf26 SWALL:Q9MC95 (EMBL:AF165214) (909 aa) fasta scores: E(): 4.8e-23, 25.98% id in 689 aa
NP_888779.1	no significant database matches
NP_888780.1	no significant database matches
NP_888781.1	no significant database matches
NP_888782.1	Similar to Serratia marcescens phage-holin analog protein regA SWALL:Q54422 (EMBL:U31763) (88 aa) fasta scores: E(): 0.97, 30.13% id in 73 aa, and to Haemophilus somnus holin SWALL:Q48281 (EMBL:U28154) (74 aa) fasta scores: E(): 2.7, 28.57% id in 63 aa
NP_888783.1	Similar to Escherichia coli probable lysozyme from lambdoid prophage qin ydfq or b1554 SWALL:LYCW_ECOLI (SWALL:P76159) (177 aa) fasta scores: E(): 0.044, 27.56% id in 185 aa, and to Bacteriophage phi-Ea1h lysozyme lyZ SWALL:Q9FZS7 (EMBL:AJ278614) (178 aa) fasta scores: E(): 0.081, 26.7% id in 191 aa
NP_888784.1	Similar to Salmonella typhimurium homology to phage-tail assembly proteins stm1869 SWALL:Q8ZNX8 (EMBL:AE008783) (177 aa) fasta scores: E(): 1.6e-08, 35.92% id in 167 aa, and to Bacteriophage N15 protein gp55 precursor 55 SWALL:VG55_BPN15 (SWALL:O64363) (181 aa) fasta scores: E(): 0.00029, 32.14% id in 168 aa
NP_888785.1	no significant database matches
NP_888786.1	no significant database matches
NP_888787.1	Similar to Bacteriophage SPBc2 YoqW protein yoqW SWALL:O64131 (EMBL:AF020713) (224 aa) fasta scores: E(): 6.8e-10, 29.69% id in 229 aa, and to Salmonella typhimurium gifsy-2 prophage stm1053 SWALL:Q8ZQ78 (EMBL:AE008745) (208 aa) fasta scores: E(): 9.1e-17, 40% id in 185 aa
NP_888788.1	ortholog of Bordetella pertussis (BX470248) BP1766
NP_888789.1	ortholog of Bordetella pertussis (BX470248) BP1767
NP_888790.1	ortholog of Bordetella pertussis (BX470248) BP1768
NP_888791.1	ortholog of Bordetella pertussis (BX470248) BP1769
NP_888792.1	ortholog of Bordetella pertussis (BX470248) BP1770
NP_888793.1	ortholog of Bordetella pertussis (BX470248) BP1771
NP_888794.1	ortholog of Bordetella pertussis (BX470248) BP1772
NP_888795.1	ortholog of Bordetella pertussis (BX470248) BP1773
NP_888796.1	Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer
NP_888797.1	hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates
NP_888798.2	binds and unfolds substrates as part of the ClpXP protease
NP_888799.1	ortholog of Bordetella pertussis (BX470248) BP1777
NP_888800.1	ortholog of Bordetella pertussis (BX470248) BP1778
NP_888801.1	ortholog of Bordetella pertussis (BX470248) BP1779
NP_888802.1	ortholog of Bordetella pertussis (BX470248) BP1780
NP_888803.1	ortholog of Bordetella pertussis (BX470248) BP1781
NP_888804.1	ortholog of Bordetella pertussis (BX470248) BP1782
NP_888805.1	ortholog of Bordetella pertussis (BX470248) BP1783
NP_888806.1	ortholog of Bordetella pertussis (BX470248) BP1784
NP_888807.1	ortholog of Bordetella pertussis (BX470248) BP1785
NP_888808.1	ortholog of Bordetella pertussis (BX470248) BP1786
NP_888809.1	ortholog of Bordetella pertussis (BX470248) BP1787
NP_888810.1	ortholog of Bordetella pertussis (BX470248) BP1788
NP_888811.1	ortholog of Bordetella pertussis (BX470248) BP1789
NP_888812.1	ortholog of Bordetella pertussis (BX470248) BP1790
NP_888813.1	ortholog of Bordetella pertussis (BX470248) BP1793
NP_888814.1	Represses a number of genes involved in the response to DNA damage
NP_888815.1	catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate
NP_888816.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion
NP_888817.1	ortholog of Bordetella pertussis (BX470248) BP1797
NP_888818.1	ortholog of Bordetella pertussis (BX470248) BP1798
NP_888819.1	catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis
NP_888820.1	ortholog of Bordetella pertussis (BX470248) BP1800
NP_888821.1	ortholog of Bordetella pertussis (BX470248) BP1801
NP_888822.1	J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone; may function in biogenesis of iron-sulfur proteins
NP_888823.2	involved in the maturation of iron-sulfur cluster-containing proteins
NP_888824.1	ortholog of Bordetella pertussis (BX470248) BP1804
NP_888825.1	ortholog of Bordetella pertussis (BX470248) BP1805
NP_888826.1	ortholog of Bordetella pertussis (BX470248) BP1806
NP_888827.1	ortholog of Bordetella pertussis (BX470248) BP1808
NP_888828.1	ortholog of Bordetella pertussis (BX470248) BP1094
NP_888829.1	ortholog of Bordetella pertussis (BX470248) BP1095
NP_888830.1	ortholog of Bordetella pertussis (BX470248) BP1096
NP_888831.1	ortholog of Bordetella pertussis (BX470248) BP1097
NP_888832.1	ortholog of Bordetella pertussis (BX470248) BP1098
NP_888833.1	ortholog of Bordetella pertussis (BX470248) BP1099
NP_888834.1	ortholog of Bordetella pertussis (BX470248) BP1100
NP_888835.1	ortholog of Bordetella pertussis (BX470248) BP1101
NP_888836.1	class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1
NP_888837.1	ortholog of Bordetella pertussis (BX470248) BP1103
NP_888838.1	recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1
NP_888839.1	ortholog of Bordetella pertussis (BX470248) BP1105
NP_888840.1	ortholog of Bordetella pertussis (BX470248) BP1106
NP_888841.1	ortholog of Bordetella pertussis (BX470248) BP1107
NP_888842.1	ortholog of Bordetella pertussis (BX470248) BP1108
NP_888843.1	ortholog of Bordetella pertussis (BX470248) BP1109
NP_888844.1	ortholog of Bordetella pertussis (BX470248) BP1110
NP_888845.1	ortholog of Bordetella pertussis (BX470248) BP1111; no significant database matches
NP_888846.1	ortholog of Bordetella pertussis (BX470248) BP1112
NP_888847.1	ortholog of Bordetella pertussis (BX470248) BP1113
NP_888848.1	ortholog of Bordetella pertussis (BX470248) BP1115
NP_888849.1	ortholog of Bordetella pertussis (BX470248) BP1116
NP_888850.1	necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
NP_888851.1	ortholog of Bordetella pertussis (BX470248) BP2671
NP_888852.1	ortholog of Bordetella pertussis (BX470248) BP2670
NP_888853.1	ortholog of Bordetella pertussis (BX470248) BP2669
NP_888854.1	catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis
NP_888855.1	ortholog of Bordetella pertussis (BX470248) BP2667
NP_888863.1	Involved in disulfide bond formation
NP_888866.1	ortholog of Bordetella pertussis (BX470248) BP2629
NP_888867.1	ortholog of Bordetella pertussis (BX470248) BP2627
NP_888868.1	ortholog of Bordetella pertussis (BX470248) BP2626
NP_888869.1	ortholog of Bordetella pertussis (BX470248) BP2625
NP_888870.1	contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway
NP_888871.1	ortholog of Bordetella pertussis (BX470248) BP2621
NP_888872.1	ortholog of Bordetella pertussis (BX470248) BP2620
NP_888875.1	ortholog of Bordetella pertussis (BX470248) BP2619; Similar to Pyrococcus abyssi C4-dicarboxylate transporter pab2393 SWALL:Q9V0I5 (EMBL:AJ248285) (339 aa) fasta scores: E(): 1.4e-10, 25.14% id in 350 aa, and to Methanococcus jannaschii hypothetical protein Mj0762 SWALL:Y762_METJA (SWALL:Q58172) (342 aa) fasta scores: E(): 1.1e-14, 25.46% id in 322 aa
NP_888876.1	Similar to Pseudomonas aeruginosa transcription regulatory protein OpdE or pa2219 SWALL:OPDE_PSEAE (SWALL:Q01602) (402 aa) fasta scores: E(): 9.5e-112, 77.09% id in 393 aa, and to Xylella fastidiosa transcriptional regulator xf1749 SWALL:Q9PCM9 (EMBL:AE003997) (409 aa) fasta scores: E(): 3.6e-122, 84.42% id in 398 aa
NP_888877.1	Similar to the C-terminal region of Xylella fastidiosa hypothetical protein Xf1750 SWALL:Q9PCM8 (EMBL:AE003998) (378 aa) fasta scores: E(): 2.4e-06, 71.87% id in 32 aa
NP_888878.1	Similar to Xylella fastidiosa hypothetical protein Xf1751 xf1751 SWALL:Q9PCM7 (EMBL:AE003998) (167 aa) fasta scores: E(): 3.1e-37, 69.75% id in 162 aa, and to Ralstonia solanacearum hypothetical protein rsc0630 rsc0630 or rs01532 SWALL:Q8Y1Q9 (EMBL:AL646060) (118 aa) fasta scores: E(): 1.1e-18, 52.13% id in 117 aa
NP_888879.1	Similar to Pseudomonas aeruginosa  transcriptional regulator pa2220 SWALL:OPRR_PSEAE (SWALL:Q01610) (306 aa) fasta scores: E(): 1.8e-95, 81.35% id in 295 aa, and to Xylella fastidiosa transcriptional regulator xf1752 SWALL:Q9PCM6 (EMBL:AE003998) (324 aa) fasta scores: E(): 1.9e-105, 83.75% id in 314 aa
NP_888880.1	ortholog of Bordetella pertussis (BX470248) BP2611
NP_888881.1	ortholog of Bordetella pertussis (BX470248) BP2610
NP_888882.1	ortholog of Bordetella pertussis (BX470248) BP2609
NP_888886.1	Similar to Rhizobium meliloti hypothetical protein ra1058 or sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 5.2e-47, 43.97% id in 332 aa, and to Agrobacterium tumefaciens hypothetical protein atu4727 or agr_l_312 SWALL:Q8U6S9 (EMBL:AE009401) (329 aa) fasta scores: E(): 1.5e-45, 44.23% id in 321 aa
NP_888897.1	ortholog of Bordetella pertussis (BX470248) BP2607
NP_888898.1	ortholog of Bordetella pertussis (BX470248) BP2598
NP_888899.1	ortholog of Bordetella pertussis (BX470248) BP2597
NP_888900.1	ortholog of Bordetella pertussis (BX470248) BP2596
NP_888901.1	ortholog of Bordetella pertussis (BX470248) BP2595
NP_888902.1	ortholog of Bordetella pertussis (BX470248) BP2594
NP_888903.1	ortholog of Bordetella pertussis (BX470248) BP2593
NP_888904.1	ortholog of Bordetella pertussis (BX470248) BP2592
NP_888905.1	ortholog of Bordetella pertussis (BX470248) BP2591
NP_888906.1	ortholog of Bordetella pertussis (BX470248) BP2590
NP_888907.1	ortholog of Bordetella pertussis (BX470248) BP2589
NP_888908.1	ortholog of Bordetella pertussis (BX470248) BP2588
NP_888928.1	ortholog of Bordetella pertussis (BX470248) BP2158
NP_888929.1	ortholog of Bordetella pertussis (BX470248) BP2157
NP_888930.1	ortholog of Bordetella pertussis (BX470248) BP2156
NP_888931.1	ortholog of Bordetella pertussis (BX470248) BP2154
NP_888932.1	ortholog of Bordetella pertussis (BX470248) BP2153
NP_888933.1	ortholog of Bordetella pertussis (BX470248) BP2152
NP_888934.1	ortholog of Bordetella pertussis (BX470248) BP2151
NP_888935.1	ortholog of Bordetella pertussis (BX470248) BP2150
NP_888936.1	ortholog of Bordetella pertussis (BX470248) BP2149
NP_888937.1	ortholog of Bordetella pertussis (BX470248) BP2148
NP_888938.1	ortholog of Bordetella pertussis (BX470248) BP2147
NP_888939.1	ortholog of Bordetella pertussis (BX470248) BP2146
NP_888940.1	ortholog of Bordetella pertussis (BX470248) BP2145
NP_888941.1	ortholog of Bordetella pertussis (BX470248) BP2144
NP_888942.1	ortholog of Bordetella pertussis (BX470248) BP2143
NP_888943.1	ortholog of Bordetella pertussis (BX470248) BP2142
NP_888944.1	ortholog of Bordetella pertussis (BX470248) BP2141
NP_888945.1	ortholog of Bordetella pertussis (BX470248) BP2140
NP_888946.1	ortholog of Bordetella pertussis (BX470248) BP2139
NP_888947.1	ortholog of Bordetella pertussis (BX470248) BP2138
NP_888948.1	ortholog of Bordetella pertussis (BX470248) BP2136
NP_888950.1	ortholog of Bordetella pertussis (BX470248) BP2134
NP_888951.1	ortholog of Bordetella pertussis (BX470248) BP2133
NP_888952.1	ortholog of Bordetella pertussis (BX470248) BP2132
NP_888953.1	ortholog of Bordetella pertussis (BX470248) BP2131
NP_888954.1	ortholog of Bordetella pertussis (BX470248) BP2130
NP_888955.1	ortholog of Bordetella pertussis (BX470248) BP2129
NP_888956.1	ortholog of Bordetella pertussis (BX470248) BP2128
NP_888957.1	ortholog of Bordetella pertussis (BX470248) BP2127
NP_888958.1	ortholog of Bordetella pertussis (BX470248) BP2126
NP_888959.1	ortholog of Bordetella pertussis (BX470248) BP2125A
NP_888960.1	ortholog of Bordetella pertussis (BX470248) BP2125
NP_888961.1	ortholog of Bordetella pertussis (BX470248) BP2124
NP_888962.1	catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, tyrosine sensitive
NP_888963.1	ortholog of Bordetella pertussis (BX470248) BP2122
NP_888964.1	catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense
NP_888965.1	ortholog of Bordetella pertussis (BX470248) BP2119
NP_888972.1	allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide
NP_888974.1	catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP
NP_888986.1	catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis
NP_888988.1	Similar to Rhizobium meliloti hypothetical signal peptide protein smc01185 r01608 or smc01185 SWALL:Q92PW5 (EMBL:AL591787) (495 aa) fasta scores: E(): 2.1e-147, 71.51% id in 488 aa
NP_888989.1	Similar to Rhizobium meliloti hypothetical transmembrane protein smc01184 r01609 or smc01184 SWALL:Q92PW4 (EMBL:AL591787) (512 aa) fasta scores: E(): 2.8e-135, 68.44% id in 469 aa
NP_888990.1	Weakly similar to Pseudomonas putida EbdR protein ebdR SWALL:Q9K4R5 (EMBL:AJ293588) (332 aa) fasta scores: E(): 0.036, 25.81% id in 275 aa
NP_888992.1	catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate
NP_889001.1	member of a large family of NAD or NADP-dependent oxidoreductases; paralogs occur in many bacteria
NP_889024.1	ortholog of Bordetella pertussis (BX470248) BP2117
NP_889025.1	ortholog of Bordetella pertussis (BX470248) BP2116
NP_889026.1	ortholog of Bordetella pertussis (BX470248) BP2115
NP_889027.1	ortholog of Bordetella pertussis (BX470248) BP2114
NP_889028.1	ortholog of Bordetella pertussis (BX470248) BP2113
NP_889029.1	ortholog of Bordetella pertussis (BX470248) BP2112
NP_889030.1	Similar to Lactococcus lactis abortive infection phage resistance protein abiu SWALL:Q9F9J7 (EMBL:AF188839) (589 aa) fasta scores: E(): 2.3e-36, 30.17% id in 570 aa
NP_889031.1	Similar to Caulobacter crescentus insertion sequence IS511 orfa and orfb genes, complete cds cc2741 and cc0514 and cc2291 and cc2689 SWALL:Q45992 (EMBL:U39501) (88 aa) fasta scores: E(): 8.2e-19, 67.81% id in 87 aa, and to Agrobacterium tumefaciens IS3 family transposase orfa or atu4605 or agr_l_545 SWALL:Q8U750 (EMBL:AE009388) (88 aa) fasta scores: E(): 2.9e-21, 75.29% id in 85 aa
NP_889032.1	Similar to Streptomyces coelicolor  DNA-binding protein sco3537 or sce2.18C SWALL:Q9X8B2 (EMBL:AL049645) (390 aa) fasta scores: E(): 1.3e-17, 29.85% id in 345 aa, and to Neisseria meningitidis transcriptional regulator, hth_3 family nmb2012 SWALL:Q9JXJ6 (EMBL:AE002551) (363 aa) fasta scores: E(): 6.9e-18, 27.83% id in 370 aa
NP_889033.1	no significant database matches
NP_889034.1	ortholog of Bordetella pertussis (BX470248) BP2111
NP_889035.1	ortholog of Bordetella pertussis (BX470248) BP2110
NP_889036.1	ortholog of Bordetella pertussis (BX470248) BP2109
NP_889037.1	ortholog of Bordetella pertussis (BX470248) BP2108
NP_889038.1	ortholog of Bordetella pertussis (BX470248) BP2107
NP_889039.1	ortholog of Bordetella pertussis (BX470248) BP2106
NP_889040.1	ortholog of Bordetella pertussis (BX470248) BP1362
NP_889041.1	ortholog of Bordetella pertussis (BX470248) BP1363
NP_889042.1	ortholog of Bordetella pertussis (BX470248) BP1364
NP_889043.1	ortholog of Bordetella pertussis (BX470248) BP2722
NP_889044.1	ortholog of Bordetella pertussis (BX470248) BP2723
NP_889045.1	ortholog of Bordetella pertussis (BX470248) BP2703
NP_889046.1	catalyzes the formation of arginine from (N-L-arginino)succinate
NP_889047.1	ortholog of Bordetella pertussis (BX470248) BP2701
NP_889048.1	NH(3)-dependent; catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers
NP_889049.1	ortholog of Bordetella pertussis (BX470248) BP2699
NP_889050.1	ortholog of Bordetella pertussis (BX470248) BP2698
NP_889051.1	ortholog of Bordetella pertussis (BX470248) BP2697
NP_889052.1	ortholog of Bordetella pertussis (BX470248) BP2696
NP_889053.1	ortholog of Bordetella pertussis (BX470248) BP2695
NP_889054.1	ortholog of Bordetella pertussis (BX470248) BP2694
NP_889055.1	ortholog of Bordetella pertussis (BX470248) BP2693
NP_889056.1	ortholog of Bordetella pertussis (BX470248) BP2692
NP_889057.1	ortholog of Bordetella pertussis (BX470248) BP2691
NP_889058.1	ortholog of Bordetella pertussis (BX470248) BP2690
NP_889062.1	ortholog of Bordetella pertussis (BX470248) BP0980
NP_889063.1	ortholog of Bordetella pertussis (BX470248) BP0981
NP_889064.1	ortholog of Bordetella pertussis (BX470248) BP0982
NP_889065.1	ortholog of Bordetella pertussis (BX470248) BP0983
NP_889066.1	ortholog of Bordetella pertussis (BX470248) BP0984
NP_889067.1	ortholog of Bordetella pertussis (BX470248) BP0985
NP_889068.1	ortholog of Bordetella pertussis (BX470248) BP0986
NP_889069.1	ortholog of Bordetella pertussis (BX470248) BP0987
NP_889070.1	ortholog of Bordetella pertussis (BX470248) BP0988
NP_889071.1	ortholog of Bordetella pertussis (BX470248) BP0989
NP_889072.1	catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate
NP_889073.1	ortholog of Bordetella pertussis (BX470248) BP0991
NP_889074.1	ortholog of Bordetella pertussis (BX470248) BP0992
NP_889075.1	E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC
NP_889076.1	Catalyzes the transfer of acetyl from acetyldihydrolipoamide to coenzyme A to form acetyl CoA
NP_889077.1	ortholog of Bordetella pertussis (BX470248) BP0995
NP_889078.1	structural flagella protein
NP_889079.1	ortholog of Bordetella pertussis (BX470248) BP1021
NP_889080.1	with FlhC is involved in the activation of class 2 flagellar genes and is involved in the regulation of a number of other genetic systems
NP_889081.1	With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems
NP_889082.1	With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine
NP_889083.1	with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine
NP_889084.1	ortholog of Bordetella pertussis (BX470248) BP1026
NP_889085.1	ortholog of Bordetella pertussis (BX470248) BP1028
NP_889086.1	ortholog of Bordetella pertussis (BX470248) BP1029
NP_889087.1	ortholog of Bordetella pertussis (BX470248) BP1030
NP_889088.1	ortholog of Bordetella pertussis (BX470248) BP1031
NP_889089.1	regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins
NP_889090.1	ortholog of Bordetella pertussis (BX470248) BP1033
NP_889091.1	cytosolic phosphatase which functions in the chemotaxis signal transduction complex by controlling the level of phosphorylated CheY through dephosphorylation
NP_889092.1	membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export
NP_889093.1	membrane protein involved in the flagellar export apparatus
NP_889094.1	positive regulator of class III flagellar genes
NP_889095.1	ortholog of Bordetella pertussis (BX470248) BP1370
NP_889096.1	ortholog of Bordetella pertussis (BX470248) BP1371
NP_889097.1	required for the assembly of the flagellar basal body P-ring
NP_889098.1	with FlgF and C makes up the proximal portion of the flagellar basal body rod; Vibrio parahaemolyticus protein is associated with the polar flagella
NP_889099.1	with FlgF and B makes up the proximal portion of the flagellar basal body rod
NP_889100.1	acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod
NP_889101.1	the hook connects flagellar basal body to the flagellar filament
NP_889102.1	FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod
NP_889103.1	makes up the distal portion of the flagellar basal body rod
NP_889104.1	part of the basal body which consists of four rings L, P, S, and M mounted on a central rod
NP_889105.1	part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum
NP_889106.1	Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space
NP_889107.1	with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook
NP_889108.1	With FlgK acts as a hook filament junction protein to join the flagellar filament to the hook
NP_889109.1	ortholog of Bordetella pertussis (BX470248) BP1384
NP_889110.1	no significant database matches
NP_889111.1	Similar to Salmonella typhimurium methyl-accepting chemotaxis protein ii tar or chem or stm1919 SWALL:MCP2_SALTY (SWALL:P02941) (553 aa) fasta scores: E(): 1.8e-65, 47.92% id in 530 aa, and to Escherichia coli methyl-accepting chemotaxis protein ii tar or chem or b1886 SWALL:MCP2_ECOLI (SWALL:P07017) (553 aa) fasta scores: E(): 1.1e-63, 47.81% id in 525 aa
NP_889112.1	ortholog of Bordetella pertussis (BX470248) BP1386
NP_889113.1	ortholog of Bordetella pertussis (BX470248) BP1389
NP_889114.1	ortholog of Bordetella pertussis (BX470248) BP1390
NP_889115.1	FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus
NP_889116.1	ortholog of Bordetella pertussis (BX470248) BP1392
NP_889117.1	ortholog of Bordetella pertussis (BX470248) BP1393
NP_889118.1	ortholog of Bordetella pertussis (BX470248) BP1394
NP_889119.1	ortholog of Bordetella pertussis (BX470248) BP1395
NP_889120.1	ortholog of Bordetella pertussis (BX470248) BP1398
NP_889121.1	ortholog of Bordetella pertussis (BX470248) BP1399
NP_889122.1	ortholog of Bordetella pertussis (BX470248) BP1400
NP_889123.1	binds to and inhibits the function of flagella specific ATPase FliI
NP_889124.1	One of three proteins involved in switching the direction of the flagellar rotation
NP_889125.1	the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod
NP_889126.1	ortholog of Bordetella pertussis (BX470248) BP1404
NP_889127.1	ortholog of Bordetella pertussis (BX470248) BP1405
NP_889128.1	ortholog of Bordetella pertussis (BX470248) BP1406
NP_889129.1	ortholog of Bordetella pertussis (BX470248) BP1407
NP_889130.1	ortholog of Bordetella pertussis (BX470248) BP1408
NP_889131.1	ortholog of Bordetella pertussis (BX470248) BP1409
NP_889132.1	ortholog of Bordetella pertussis (BX470248) BP1410
NP_889133.1	ortholog of Bordetella pertussis (BX470248) BP1411; Similar to Pseudomonas aeruginosa FlaG SWALL:O33420 (EMBL:L81176) (128 aa) fasta scores: E(): 0.035, 31.35% id in 118 aa, and to Aeromonas salmonicida FlaGellin protein flaG SWALL:O30378 (EMBL:AF002709) (146 aa) fasta scores: E(): 1.9, 35.48% id in 62 aa
NP_889134.1	ortholog of Bordetella pertussis (BX470248) BP1412
NP_889135.1	ortholog of Bordetella pertussis (BX470248) BP1413
NP_889136.1	ortholog of Bordetella pertussis (BX470248) BP1414
NP_889137.1	Catalyzes first step of the de novo purine nucleotide biosynthetic pathway
NP_889138.1	ortholog of Bordetella pertussis (BX470248) BP1416
NP_889139.1	ortholog of Bordetella pertussis (BX470248) BP1416A
NP_889140.1	catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein
NP_889141.1	ortholog of Bordetella pertussis (BX470248) BP1418
NP_889142.1	one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit
NP_889143.2	EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu
NP_889144.2	Catalyzes the phosphorylation of UMP to UDP
NP_889145.1	Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs
NP_889146.1	catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate
NP_889147.1	ortholog of Bordetella pertussis (BX470248) BP1424
NP_889148.1	catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate
NP_889149.1	ortholog of Bordetella pertussis (BX470248) BP1426
NP_889150.1	ortholog of Bordetella pertussis (BX470248) BP1427
NP_889151.1	ortholog of Bordetella pertussis (BX470248) BP1428
NP_889152.1	adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis
NP_889153.1	in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP
NP_889154.1	catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis
NP_889155.1	catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM
NP_889156.1	RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids
NP_889157.1	ortholog of Bordetella pertussis (BX470248) BP1434
NP_889158.1	ortholog of Bordetella pertussis (BX470248) BP1435
NP_889159.1	catalyzes the formation of phosphoenolpyruvate from pyruvate
NP_889160.1	Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group
NP_889161.1	ortholog of Bordetella pertussis (BX470248) BP1438
NP_889162.1	ortholog of Bordetella pertussis (BX470248) BP1440
NP_889163.1	ortholog of Bordetella pertussis (BX470248) BP1441
NP_889164.1	binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation
NP_889165.1	ortholog of Bordetella pertussis (BX470248) BP1443
NP_889166.1	ortholog of Bordetella pertussis (BX470248) BP1444
NP_889167.1	ortholog of Bordetella pertussis (BX470248) BP1445
NP_889168.1	ortholog of Bordetella pertussis (BX470248) BP1446
NP_889169.1	ortholog of Bordetella pertussis (BX470248) BP1447
NP_889170.1	ortholog of Bordetella pertussis (BX470248) BP1448
NP_889171.1	ortholog of Bordetella pertussis (BX470248) BP1449
NP_889172.1	ortholog of Bordetella pertussis (BX470248) BP1845
NP_889173.1	ortholog of Bordetella pertussis (BX470248) BP1846
NP_889174.1	catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP)
NP_889175.1	ortholog of Bordetella pertussis (BX470248) BP1848
NP_889176.1	ortholog of Bordetella pertussis (BX470248) BP1849
NP_889177.1	ortholog of Bordetella pertussis (BX470248) BP1850
NP_889178.1	ortholog of Bordetella pertussis (BX470248) BP1851
NP_889179.1	ortholog of Bordetella pertussis (BX470248) BP1852
NP_889180.1	ortholog of Bordetella pertussis (BX470248) BP1853
NP_889181.1	ortholog of Bordetella pertussis (BX470248) BP1855
NP_889182.1	catalyzes the formation of glutamate and formamide from N-formimidoyl-L-glutamate
NP_889183.1	ortholog of Bordetella pertussis (BX470248) BP1857
NP_889184.1	ortholog of Bordetella pertussis (BX470248) BP1858
NP_889185.1	allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide
NP_889186.1	catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; also known as acetolactate synthase large subunit
NP_889187.1	ortholog of Bordetella pertussis (BX470248) BP1861
NP_889188.1	ortholog of Bordetella pertussis (BX470248) BP1862
NP_889189.1	ortholog of Bordetella pertussis (BX470248) BP1863
NP_889190.1	ortholog of Bordetella pertussis (BX470248) BP1864
NP_889191.1	ortholog of Bordetella pertussis (BX470248) BP1865
NP_889192.1	ortholog of Bordetella pertussis (BX470248) BP1867
NP_889193.1	ortholog of Bordetella pertussis (BX470248) BP1868
NP_889198.1	Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; possibly involved in prevention of copper toxicity
NP_889205.1	ortholog of Bordetella pertussis (BX470248) BP1176
NP_889206.1	ortholog of Bordetella pertussis (BX470248) BP1175
NP_889207.1	ortholog of Bordetella pertussis (BX470248) BP1174
NP_889208.1	ortholog of Bordetella pertussis (BX470248) BP1172
NP_889209.1	ortholog of Bordetella pertussis (BX470248) BP1171
NP_889210.1	ortholog of Bordetella pertussis (BX470248) BP1170
NP_889211.1	ortholog of Bordetella pertussis (BX470248) BP1169
NP_889212.1	ortholog of Bordetella pertussis (BX470248) BP1168
NP_889213.1	ortholog of Bordetella pertussis (BX470248) BP1167
NP_889214.1	ortholog of Bordetella pertussis (BX470248) BP1166
NP_889215.1	ortholog of Bordetella pertussis (BX470248) BP1165A
NP_889216.1	ortholog of Bordetella pertussis (BX470248) BP1165
NP_889217.1	ortholog of Bordetella pertussis (BX470248) BP1164
NP_889218.1	ortholog of Bordetella pertussis (BX470248) BP1163
NP_889219.1	ortholog of Bordetella pertussis (BX470248) BP1162
NP_889220.1	ortholog of Bordetella pertussis (BX470248) BP1161
NP_889221.1	ortholog of Bordetella pertussis (BX470248) BP1160
NP_889222.1	ortholog of Bordetella pertussis (BX470248) BP1159
NP_889223.1	ortholog of Bordetella pertussis (BX470248) BP1158
NP_889226.1	Similar to Escherichia coli biotin carboxylase accc or fabg or b3256 SWALL:ACCC_ECOLI (SWALL:P24182) (449 aa) fasta scores: E(): 4.6e-68, 47.81% id in 435 aa, and to Ralstonia solanacearum probable biotin carboxylase accc1 or rsc2787 or rs00060 SWALL:Q8XVP3 (EMBL:AL646071) (456 aa) fasta scores: E(): 7.7e-72, 50.7% id in 428 aa
NP_889227.1	Similar to Sulfolobus metallicus  carboxyl transferase PccB SWALL:O52601 (EMBL:AF042099) (517 aa) fasta scores: E(): 1.8e-49, 32.59% id in 497 aa, and to Archaeoglobus fulgidus methylmalonyl-CoA decarboxylase, subunit alpha af2217 SWALL:O28066 (EMBL:AE000952) (516 aa) fasta scores: E(): 1.1e-54, 35.81% id in 497 aa
NP_889228.1	Similar to Rhizobium meliloti hypothetical protein ra1058 or sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 6.9e-35, 37.46% id in 323 aa, and to Variovorax paradoxus, and Burkholderia cepacia 2,4-diphenoxyacetic acid gene cluster SWALL:Q9RHQ7 (EMBL:AB028643) (337 aa) fasta scores: E(): 7.1e-33, 36.57% id in 309 aa
NP_889229.1	Similar to Rhizobium loti hypothetical protein Mlr2046 SWALL:Q98J90 (EMBL:AP002998) (151 aa) fasta scores: E(): 0.0027, 29.56% id in 115 aa
NP_889230.1	Similar to Ralstonia solanacearum  oxidoreductase rsc3407 or rs01716 SWALL:Q8XTY8 (EMBL:AL646075) (435 aa) fasta scores: E(): 2.3e-85, 56% id in 425 aa, and to Rhizobium loti probable oxidoreductase mll7103 SWALL:Q987C9 (EMBL:AP003011) (427 aa) fasta scores: E(): 2.3e-56, 44.39% id in 419 aa
NP_889260.1	ortholog of Bordetella pertussis (BX470248) BP1646
NP_889261.1	ortholog of Bordetella pertussis (BX470248) BP1645
NP_889262.1	ortholog of Bordetella pertussis (BX470248) BP1644
NP_889263.1	ortholog of Bordetella pertussis (BX470248) BP1643
NP_889264.1	ortholog of Bordetella pertussis (BX470248) BP1642
NP_889265.1	ortholog of Bordetella pertussis (BX470248) BP1641
NP_889266.1	ortholog of Bordetella pertussis (BX470248) BP1640
NP_889267.1	ortholog of Bordetella pertussis (BX470248) BP1639A
NP_889268.1	ortholog of Bordetella pertussis (BX470248) BP1639
NP_889269.1	ortholog of Bordetella pertussis (BX470248) BP1638
NP_889270.1	ortholog of Bordetella pertussis (BX470248) BP1637
NP_889271.1	ortholog of Bordetella pertussis (BX470248) BP1636
NP_889272.1	ortholog of Bordetella pertussis (BX470248) BP1635
NP_889273.1	ortholog of Bordetella pertussis (BX470248) BP1634
NP_889274.1	ortholog of Bordetella pertussis (BX470248) BP1657
NP_889275.1	ortholog of Bordetella pertussis (BX470248) BP1658
NP_889276.1	ortholog of Bordetella pertussis (BX470248) BP1659
NP_889277.1	ortholog of Bordetella pertussis (BX470248) BP1660
NP_889278.1	ortholog of Bordetella pertussis (BX470248) BP1662
NP_889279.1	ortholog of Bordetella pertussis (BX470248) BP1663
NP_889280.1	ortholog of Bordetella pertussis (BX470248) BP1664
NP_889281.1	ortholog of Bordetella pertussis (BX470248) BP1674
NP_889282.1	ortholog of Bordetella pertussis (BX470248) BP1675
NP_889283.1	ortholog of Bordetella pertussis (BX470248) BP1676
NP_889284.1	ortholog of Bordetella pertussis (BX470248) BP1677
NP_889285.1	Similar to Brucella melitensis alkanal monooxygenase alpha chain bmei0894 SWALL:Q8YHA8 (EMBL:AE009530) (327 aa) fasta scores: E(): 4.5e-57, 51.52% id in 328 aa, and to Escherichia coli hypothetical protein yhbw or b3160 SWALL:YHBW_ECOLI (SWALL:P45529) (335 aa) fasta scores: E(): 1.1e-53, 50.31% id in 318 aa
NP_889286.1	Similar to Escherichia coli N-ethylmaleimide reductase NemA or b1650 SWALL:NEMA_ECOLI (SWALL:P77258) (365 aa) fasta scores: E(): 2.2e-53, 43.83% id in 365 aa, and to Yersinia pestis morphinone reductase MorB SWALL:Q93AB5 (EMBL:AF426171) (369 aa) fasta scores: E(): 6.9e-72, 52.17% id in 368 aa
NP_889287.1	Similar to Ralstonia solanacearum hypothetical protein rsp0908 or rs01680 SWALL:Q8XRE6 (EMBL:AL646081) (319 aa) fasta scores: E(): 2e-44, 44.65% id in 318 aa, and to Pseudomonas aeruginosa hypothetical protein Pa1186 SWALL:Q9I4F2 (EMBL:AE004549) (339 aa) fasta scores: E(): 4.6e-42, 43.51% id in 324 aa
NP_889288.1	Similar to Rhizobium loti probable transcriptional regulator mlr2579 SWALL:Q98I42 (EMBL:AP003000) (304 aa) fasta scores: E(): 3.7e-37, 40.26% id in 303 aa, and to Yersinia pestis  transcriptional regulator mlr2579 SWALL:Q93AB4 (EMBL:AF426171) (303 aa) fasta scores: E(): 3.4e-35, 37.37% id in 297 aa
NP_889289.1	Similar to Alcaligenes eutrophus hypothetical 42.8 kDa protein SWALL:Q9RBG0 (EMBL:AF130250) (401 aa) fasta scores: E(): 1.2e-45, 40.81% id in 370 aa, and to Ralstonia solanacearum  salicylate hydroxylase oxidoreductase rsp0911 or rs01683 SWALL:Q8XRE3 (EMBL:AL646081) (397 aa) fasta scores: E(): 2.9e-44, 38.77% id in 374 aa
NP_889290.1	Similar to Ralstonia solanacearum hypothetical protein rsc2017 or rs03585 SWALL:Q8XXU6 (EMBL:AL646067) (134 aa) fasta scores: E(): 0.00069, 33.84% id in 130 aa, and to Arabidopsis thaliana at2g28420/t1b3.6 SWALL:Q941C8 (EMBL:AY052254) (184 aa) fasta scores: E(): 0.013, 31.54% id in 168 aa
NP_889291.1	Similar to Ralstonia solanacearum substrate-binding periplasmic rsc3342 or rs02578 SWALL:Q8XU51 (EMBL:AL646074) (402 aa) fasta scores: E(): 7.2e-29, 31.13% id in 395 aa, and to Brucella melitensis branched-chain amino acid ABC transporter periplasmic amino acid-binding protein bmeii0344 SWALL:Q8YD33 (EMBL:AE009671) (401 aa) fasta scores: E(): 3.3e-21, 26.75% id in 385 aa
NP_889292.1	Similar to Rhizobium meliloti  permease ABC transporter protein r02975 or smc03118 SWALL:Q92LQ5 (EMBL:AL591792) (295 aa) fasta scores: E(): 6.5e-47, 50.17% id in 281 aa, and to Agrobacterium tumefaciens ABC transporter membrane spanning protein atu4126 or agr_l_1455 SWALL:Q8U8G6 (EMBL:AE009343) (295 aa) fasta scores: E(): 6.5e-47, 48.44% id in 289 aa
NP_889293.1	Similar to Agrobacterium tumefaciens ABC transporter membrane spanning protein atu4127 or agr_l_1453 SWALL:Q8U8G5 (EMBL:AE009343) (335 aa) fasta scores: E(): 3.7e-37, 40.82% id in 316 aa, and to Ralstonia solanacearum probable transmembrane ABC transporter protein rsc3340 or rs02575 SWALL:Q8XU53 (EMBL:AL646074) (328 aa) fasta scores: E(): 6e-36, 42.12% id in 311 aa
NP_889294.1	Similar to Ralstonia solanacearum probable ATP-binding ABC transporter protein rsc3344 or rs02581 SWALL:Q8XU49 (EMBL:AL646074) (256 aa) fasta scores: E(): 2.5e-35, 46.15% id in 247 aa, and to Deinococcus radiodurans branched-chain amino acid ABC transporter ATP-binding protein dr0283 SWALL:Q9RXM7 (EMBL:AE001889) (290 aa) fasta scores: E(): 4.3e-33, 44.96% id in 258 aa
NP_889295.1	Similar to Thermotoga maritima branched chain amino acid ABC transporter ATP-binding protein tm1139 SWALL:Q9X0M3 (EMBL:AE001771) (239 aa) fasta scores: E(): 1.4e-32, 47.05% id in 238 aa, and to Deinococcus radiodurans branched-chain amino acid ABC transporter ATP-binding protein dr1034 SWALL:Q9RVJ4 (EMBL:AE001955) (252 aa) fasta scores: E(): 5.8e-32, 46.12% id in 232 aa
NP_889296.1	Similar to Thermotoga maritima transcriptional regulator, TetR family tm1030 SWALL:Q9X0C0 (EMBL:AE001764) (200 aa) fasta scores: E(): 0.032, 22.88% id in 201 aa, and to Clostridium acetobutylicum transcriptional regulator, AcRR family cac3271 SWALL:Q97E45 (EMBL:AE007822) (205 aa) fasta scores: E(): 0.0027, 20.94% id in 191 aa
NP_889307.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
NP_889313.1	catalyzes the oxidative deamination of D-amino acids
NP_889316.1	ortholog of Bordetella pertussis (BX470248) BP1679
NP_889317.1	ortholog of Bordetella pertussis (BX470248) BP1680
NP_889318.1	ortholog of Bordetella pertussis (BX470248) BP1681
NP_889319.1	ortholog of Bordetella pertussis (BX470248) BP1682
NP_889320.1	ortholog of Bordetella pertussis (BX470248) BP1683
NP_889321.1	ortholog of Bordetella pertussis (BX470248) BP1684
NP_889322.1	ortholog of Bordetella pertussis (BX470248) BP1685
NP_889323.1	ortholog of Bordetella pertussis (BX470248) BP1686
NP_889324.1	ortholog of Bordetella pertussis (BX470248) BP1687
NP_889325.1	ortholog of Bordetella pertussis (BX470248) BP1688
NP_889327.1	Similar to Alcaligenes eutrophus maleylacetate reductase I TfdfI or TfdF SWALL:TFF1_ALCEU (SWALL:P27137) (354 aa) fasta scores: E(): 1e-15, 27.71% id in 368 aa, and to Sulfolobus solfataricus maleylacetate reductase ClcE or sso2490 SWALL:Q97VW4 (EMBL:AE006847) (327 aa) fasta scores: E(): 5.2e-18, 28.74% id in 334 aa
NP_889330.1	Similar to Rhizobium meliloti hypothetical protein rb0633 rb0633 or smb21054 SWALL:Q92VR6 (EMBL:AL603644) (205 aa) fasta scores: E(): 1.1e-07, 28.23% id in 209 aa
NP_889331.1	Similar to Salmonella typhi  ABC-transport ATP-binding protein sty2159 SWALL:Q8Z5T0 (EMBL:AL627272) (250 aa) fasta scores: E(): 3.1e-43, 56.62% id in 249 aa, and to Streptomyces coelicolor ATP-binding protein atrc or sco5258 or 2sc7g11.20C SWALL:Q9F3K7 (EMBL:AL391763) (253 aa) fasta scores: E(): 6.7e-43, 55.6% id in 250 aa
NP_889332.1	Similar to Escherichia coli O157:H7  transport system permease YecS or z3006 or ecs2656 SWALL:Q8XBC8 (EMBL:AE005414) (222 aa) fasta scores: E(): 1.6e-23, 40.27% id in 221 aa, and to Listeria innocua hypothetical protein Lin1851 lin1851 SWALL:Q92AR8 (EMBL:AL596170) (213 aa) fasta scores: E(): 7.1e-40, 50.23% id in 215 aa
NP_889333.1	Similar to Clostridium perfringens probable amino acid ABC transporter cpe1324 SWALL:Q8XKS0 (EMBL:AP003190) (262 aa) fasta scores: E(): 2.5e-36, 41.79% id in 268 aa, and to Streptococcus pneumoniae R6 ABC transporter substrate-binding protein-glutamine transport glnH SWALL:AAL00157 (EMBL:AE008505) (278 aa) fasta scores: E(): 8.9e-29, 34.81% id in 270 aa
NP_889334.1	Similar to Paracoccus pantotrophus NapE protein napE SWALL:NAPE_PARPN (SWALL:Q56348) (59 aa) fasta scores: E(): 1.7e-05, 43.75% id in 48 aa, and to Pseudomonas sp. G-179 NapE napE SWALL:Q9Z3W7 (EMBL:AF083948) (71 aa) fasta scores: E(): 2.9e-05, 50% id in 42 aa
NP_889335.1	Similar to Rhodobacter sphaeroides f. sp. denitrificans NapD precursor SWALL:O88156 (EMBL:AF069545) (88 aa) fasta scores: E(): 0.0007, 33.33% id in 84 aa, and to Agrobacterium tumefaciens periplasmic nitrate reductase, napd protein napd or atu4407 or agr_l_919 SWALL:Q8U7P2 (EMBL:AE009369) (95 aa) fasta scores: E(): 0.00016, 30.33% id in 89 aa
NP_889336.1	periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC
NP_889343.1	CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane
NP_889350.1	ortholog of Bordetella pertussis (BX470248) BP1360
NP_889351.1	ortholog of Bordetella pertussis (BX470248) BP1359
NP_889352.1	ortholog of Bordetella pertussis (BX470248) BP1358
NP_889353.1	dehydratase, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate
NP_889354.1	catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D
NP_889355.1	ortholog of Bordetella pertussis (BX470248) BP1355
NP_889356.1	ortholog of Bordetella pertussis (BX470248) BP1354
NP_889357.1	ortholog of Bordetella pertussis (BX470248) BP1353
NP_889358.1	Catalyzes the first step in the citric acid cycle. Oxaloacetate and acetyl-CoA bind to citrate synthase, which then catalyzes the reaction which joins the two compounds together
NP_889359.1	ortholog of Bordetella pertussis (BX470248) BP1351
NP_889360.1	ortholog of Bordetella pertussis (BX470248) BP1350
NP_889361.1	ortholog of Bordetella pertussis (BX470248) BP1349
NP_889362.1	ortholog of Bordetella pertussis (BX470248) BP1348
NP_889363.1	ortholog of Bordetella pertussis (BX470248) BP1347
NP_889364.1	ortholog of Bordetella pertussis (BX470248) BP1346
NP_889365.1	ortholog of Bordetella pertussis (BX470248) BP1345
NP_889366.1	ortholog of Bordetella pertussis (BX470248) BP1344
NP_889367.1	ortholog of Bordetella pertussis (BX470248) BP1343
NP_889368.1	ortholog of Bordetella pertussis (BX470248) BP1342
NP_889369.1	ortholog of Bordetella pertussis (BX470248) BP1341
NP_889370.1	ortholog of Bordetella pertussis (BX470248) BP1340
NP_889371.1	ortholog of Bordetella pertussis (BX470248) BP1339
NP_889372.1	ortholog of Bordetella pertussis (BX470248) BP1338
NP_889373.1	ortholog of Bordetella pertussis (BX470248) BP1335
NP_889374.1	ortholog of Bordetella pertussis (BX470248) BP1334
NP_889375.1	ortholog of Bordetella pertussis (BX470248) BP1333
NP_889376.1	ortholog of Bordetella pertussis (BX470248) BP1332A
NP_889381.1	catalyzes the ATP dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA
NP_889392.1	catalyzes the formation of acetate from pyruvate
NP_889395.1	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen
NP_889397.1	catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose
NP_889398.1	ortholog of Bordetella pertussis (BX470248) BP1330
NP_889399.1	ortholog of Bordetella pertussis (BX470248) BP1329
NP_889400.1	catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain
NP_889401.1	ortholog of Bordetella pertussis (BX470248) BP1327
NP_889402.1	ortholog of Bordetella pertussis (BX470248) BP1326
NP_889403.1	ortholog of Bordetella pertussis (BX470248) BP1324
NP_889404.1	ortholog of Bordetella pertussis (BX470248) BP1323
NP_889405.1	ortholog of Bordetella pertussis (BX470248) BP1322
NP_889406.1	catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal
NP_889407.1	ortholog of Bordetella pertussis (BX470248) BP1320
NP_889408.1	ortholog of Bordetella pertussis (BX470248) BP1319
NP_889409.1	ortholog of Bordetella pertussis (BX470248) BP1318
NP_889410.1	ortholog of Bordetella pertussis (BX470248) BP1316
NP_889411.1	ortholog of Bordetella pertussis (BX470248) BP1315
NP_889412.1	ortholog of Bordetella pertussis (BX470248) BP1314
NP_889413.1	ortholog of Bordetella pertussis (BX470248) BP1313
NP_889414.1	ortholog of Bordetella pertussis (BX470248) BP1312
NP_889415.1	ortholog of Bordetella pertussis (BX470248) BP1311
NP_889416.1	ortholog of Bordetella pertussis (BX470248) BP1310
NP_889417.1	ortholog of Bordetella pertussis (BX470248) BP1307
NP_889418.1	ortholog of Bordetella pertussis (BX470248) BP1306
NP_889419.1	ortholog of Bordetella pertussis (BX470248) BP1305
NP_889420.1	ortholog of Bordetella pertussis (BX470248) BP1304
NP_889421.1	ortholog of Bordetella pertussis (BX470248) BP1303
NP_889422.1	ortholog of Bordetella pertussis (BX470248) BP1302
NP_889423.1	ortholog of Bordetella pertussis (BX470248) BP1301
NP_889424.1	ortholog of Bordetella pertussis (BX470248) BP1300
NP_889425.1	ortholog of Bordetella pertussis (BX470248) BP1299
NP_889426.1	ortholog of Bordetella pertussis (BX470248) BP1298
NP_889427.1	ortholog of Bordetella pertussis (BX470248) BP1297
NP_889428.1	ortholog of Bordetella pertussis (BX470248) BP1296
NP_889429.1	ortholog of Bordetella pertussis (BX470248) BP1295
NP_889430.1	catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine
NP_889431.1	ortholog of Bordetella pertussis (BX470248) BP1293
NP_889432.1	ortholog of Bordetella pertussis (BX470248) BP1292
NP_889433.1	ortholog of Bordetella pertussis (BX470248) BP1291
NP_889434.1	ortholog of Bordetella pertussis (BX470248) BP1290
NP_889435.1	ortholog of Bordetella pertussis (BX470248) BP1289
NP_889436.1	ortholog of Bordetella pertussis (BX470248) BP1288+BP1269
NP_889437.1	ortholog of Bordetella pertussis (BX470248) BP1270
NP_889438.1	ortholog of Bordetella pertussis (BX470248) BP1271
NP_889440.1	ortholog of Bordetella pertussis (BX470248) BP1272
NP_889441.1	ortholog of Bordetella pertussis (BX470248) BP1273
NP_889442.1	Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine
NP_889443.1	Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine
NP_889444.1	ortholog of Bordetella pertussis (BX470248) BP1276
NP_889445.1	ortholog of Bordetella pertussis (BX470248) BP1277
NP_889446.1	ortholog of Bordetella pertussis (BX470248) BP1279
NP_889447.1	ortholog of Bordetella pertussis (BX470248) BP1280
NP_889448.1	ortholog of Bordetella pertussis (BX470248) BP1281
NP_889449.1	ortholog of Bordetella pertussis (BX470248) BP1282
NP_889450.1	ortholog of Bordetella pertussis (BX470248) BP1283
NP_889451.1	part of the UgpABCE glycerol-3-phosphate uptake system
NP_889452.1	ortholog of Bordetella pertussis (BX470248) BP1285
NP_889453.1	ortholog of Bordetella pertussis (BX470248) BP1286
NP_889456.1	ortholog of Bordetella pertussis (BX470248) BP1654
NP_889457.1	ortholog of Bordetella pertussis (BX470248) BP1655
NP_889458.1	ortholog of Bordetella pertussis (BX470248) BP1632
NP_889459.1	ortholog of Bordetella pertussis (BX470248) BP1631
NP_889460.1	ortholog of Bordetella pertussis (BX470248) BP1630
NP_889461.1	ortholog of Bordetella pertussis (BX470248) BP1629
NP_889462.1	ortholog of Bordetella pertussis (BX470248) BP1628
NP_889463.1	ortholog of Bordetella pertussis (BX470248) BP1627
NP_889464.1	ortholog of Bordetella pertussis (BX470248) BP1626
NP_889465.1	ortholog of Bordetella pertussis (BX470248) BP1625
NP_889466.1	ortholog of Bordetella pertussis (BX470248) BP1624
NP_889467.1	ortholog of Bordetella pertussis (BX470248) BP1623
NP_889468.1	ortholog of Bordetella pertussis (BX470248) BP1620
NP_889469.1	ortholog of Bordetella pertussis (BX470248) BP1619
NP_889470.1	ortholog of Bordetella pertussis (BX470248) BP1618+BP1617
NP_889471.1	ortholog of Bordetella pertussis (BX470248) BP1616
NP_889472.1	ortholog of Bordetella pertussis (BX470248) BP1615
NP_889473.1	ortholog of Bordetella pertussis (BX470248) BP1614
NP_889474.1	ortholog of Bordetella pertussis (BX470248) BP1613
NP_889475.1	catalyzes branch migration in Holliday junction intermediates
NP_889476.1	ortholog of Bordetella pertussis (BX470248) BP1611
NP_889477.1	ortholog of Bordetella pertussis (BX470248) BP1610
NP_889478.1	catalyzes the reduction of 2,5-diketo-D-gluconic acid to 2-keto-L-gulonic acid
NP_889479.1	ortholog of Bordetella pertussis (BX470248) BP1608
NP_889480.1	ortholog of Bordetella pertussis (BX470248) BP1607
NP_889481.1	ortholog of Bordetella pertussis (BX470248) BP1606
NP_889482.1	ortholog of Bordetella pertussis (BX470248) BP1605
NP_889483.1	ortholog of Bordetella pertussis (BX470248) BP1604
NP_889484.1	ortholog of Bordetella pertussis (BX470248) BP1603
NP_889485.1	ortholog of Bordetella pertussis (BX470248) BP1601
NP_889486.1	ortholog of Bordetella pertussis (BX470248) BP1600
NP_889487.1	ortholog of Bordetella pertussis (BX470248) BP1599
NP_889488.1	ortholog of Bordetella pertussis (BX470248) BP1598
NP_889489.1	ortholog of Bordetella pertussis (BX470248) BP1597
NP_889490.1	ortholog of Bordetella pertussis (BX470248) BP1596
NP_889491.1	catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III
NP_889492.1	HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine
NP_889493.1	ortholog of Bordetella pertussis (BX470248) BP1592
NP_889494.1	ortholog of Bordetella pertussis (BX470248) BP1591
NP_889495.1	ortholog of Bordetella pertussis (BX470248) BP1590
NP_889496.1	ortholog of Bordetella pertussis (BX470248) BP1589
NP_889497.1	RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs
NP_889498.1	ortholog of Bordetella pertussis (BX470248) BP1587
NP_889499.1	ortholog of Bordetella pertussis (BX470248) BP1586
NP_889500.1	ortholog of Bordetella pertussis (BX470248) BP1585
NP_889501.1	ortholog of Bordetella pertussis (BX470248) BP1584
NP_889502.1	Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile
NP_889503.1	ortholog of Bordetella pertussis (BX470248) BP1582
NP_889504.1	ortholog of Bordetella pertussis (BX470248) BP1581
NP_889505.1	ortholog of Bordetella pertussis (BX470248) BP1580
NP_889506.1	ortholog of Bordetella pertussis (BX470248) BP1579
NP_889507.1	Essential for recycling GMP and indirectly, cGMP
NP_889508.1	Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
NP_889509.1	ortholog of Bordetella pertussis (BX470248) BP1576
NP_889510.1	similar to ATP-binding protein of ABC transporters
NP_889511.1	similar to permease of ABC transporters; mutations impair ability of Escherichia coli to transport and utilize glutamine
NP_889512.1	similar to periplasmic-binding component of ABC transporters
NP_889513.1	ortholog of Bordetella pertussis (BX470248) BP1896
NP_889514.1	ortholog of Bordetella pertussis (BX470248) BP1895
NP_889515.1	ortholog of Bordetella pertussis (BX470248) BP1894
NP_889516.1	ortholog of Bordetella pertussis (BX470248) BP1893
NP_889517.1	ortholog of Bordetella pertussis (BX470248) BP1892
NP_889518.1	ortholog of Bordetella pertussis (BX470248) BP1891
NP_889519.1	ortholog of Bordetella pertussis (BX470248) BP1890
NP_889520.1	ortholog of Bordetella pertussis (BX470248) BP1888
NP_889521.1	ortholog of Bordetella pertussis (BX470248) BP1887
NP_889522.1	ortholog of Bordetella pertussis (BX470248) BP1886
NP_889523.1	ortholog of Bordetella pertussis (BX470248) BP1885
NP_889524.1	ortholog of Bordetella pertussis (BX470248) BP1884
NP_889525.1	ortholog of Bordetella pertussis (BX470248) BP1883
NP_889526.1	ortholog of Bordetella pertussis (BX470248) BP1882
NP_889527.1	ortholog of Bordetella pertussis (BX470248) BP1881
NP_889528.1	ortholog of Bordetella pertussis (BX470248) BP1880
NP_889529.1	ortholog of Bordetella pertussis (BX470248) BP1879
NP_889530.1	ortholog of Bordetella pertussis (BX470248) BP1878
NP_889531.1	ortholog of Bordetella pertussis (BX470248) BP1877
NP_889532.1	ortholog of Bordetella pertussis (BX470248) BP1876
NP_889533.1	ortholog of Bordetella pertussis (BX470248) BP1875
NP_889534.1	catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia
NP_889535.1	ortholog of Bordetella pertussis (BX470248) BP1871
NP_889536.1	ortholog of Bordetella pertussis (BX470248) BP1870
NP_889541.1	ortholog of Bordetella pertussis (BX470248) BP1734
NP_889542.1	ortholog of Bordetella pertussis (BX470248) BP1733
NP_889543.1	ortholog of Bordetella pertussis (BX470248) BP1732
NP_889544.1	hydrolyzes diesters during transport at the inner face of the cytoplasmic membrane to glycerol-3-phosphate and alcohol; induced when cells are starved for inorganic phosphate
NP_889545.1	ortholog of Bordetella pertussis (BX470248) BP1730
NP_889546.1	Catalyzes the oxidation of dihydrolipoamide to lipoamide
NP_889547.1	ortholog of Bordetella pertussis (BX470248) BP1728
NP_889548.1	ortholog of Bordetella pertussis (BX470248) BP1727
NP_889549.1	ortholog of Bordetella pertussis (BX470248) BP1726
NP_889550.1	in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S]
NP_889551.1	ortholog of Bordetella pertussis (BX470248) BP1724
NP_889552.1	ortholog of Bordetella pertussis (BX470248) BP1723
NP_889553.1	ortholog of Bordetella pertussis (BX470248) BP1722
NP_889554.1	ortholog of Bordetella pertussis (BX470248) BP1721
NP_889555.1	ortholog of Bordetella pertussis (BX470248) BP1720
NP_889556.1	catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate
NP_889557.1	involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX
NP_889558.1	in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity
NP_889559.1	ortholog of Bordetella pertussis (BX470248) BP1715
NP_889560.1	ortholog of Bordetella pertussis (BX470248) BP1714
NP_889561.1	ortholog of Bordetella pertussis (BX470248) BP1713
NP_889562.1	ortholog of Bordetella pertussis (BX470248) BP1712
NP_889563.1	ortholog of Bordetella pertussis (BX470248) BP1710
NP_889564.1	ortholog of Bordetella pertussis (BX470248) BP1709
NP_889565.1	ortholog of Bordetella pertussis (BX470248) BP1708
NP_889566.1	ortholog of Bordetella pertussis (BX470248) BP1707
NP_889567.1	ortholog of Bordetella pertussis (BX470248) BP1706
NP_889568.1	ortholog of Bordetella pertussis (BX470248) BP1705
NP_889569.1	ortholog of Bordetella pertussis (BX470248) BP1704
NP_889570.1	ortholog of Bordetella pertussis (BX470248) BP1703
NP_889571.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
NP_889572.1	ortholog of Bordetella pertussis (BX470248) BP1701
NP_889573.1	ortholog of Bordetella pertussis (BX470248) BP1700
NP_889574.1	ortholog of Bordetella pertussis (BX470248) BP1699
NP_889575.1	ortholog of Bordetella pertussis (BX470248) BP1698
NP_889576.1	subunit G of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali
NP_889577.1	subunit F of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport
NP_889578.1	subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport
NP_889579.1	subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone
NP_889580.1	subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali
NP_889581.1	subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+
NP_889582.1	ortholog of Bordetella pertussis (BX470248) BP1690+BP2631
NP_889583.1	ortholog of Bordetella pertussis (BX470248) BP2632
NP_889584.1	ortholog of Bordetella pertussis (BX470248) BP2633
NP_889585.1	catalyzes the oxidative deamination of D-amino acids
NP_889586.1	ortholog of Bordetella pertussis (BX470248) BP2635
NP_889587.1	ortholog of Bordetella pertussis (BX470248) BP2636
NP_889588.1	ortholog of Bordetella pertussis (BX470248) BP2637
NP_889589.1	ortholog of Bordetella pertussis (BX470248) BP2638
NP_889590.1	ortholog of Bordetella pertussis (BX470248) BP2639
NP_889591.1	ortholog of Bordetella pertussis (BX470248) BP2640
NP_889592.1	ortholog of Bordetella pertussis (BX470248) BP2641
NP_889593.1	ortholog of Bordetella pertussis (BX470248) BP2642
NP_889594.1	ortholog of Bordetella pertussis (BX470248) BP2642A
NP_889595.1	ortholog of Bordetella pertussis (BX470248) BP2643
NP_889596.1	ortholog of Bordetella pertussis (BX470248) BP2644
NP_889597.1	ortholog of Bordetella pertussis (BX470248) BP2645
NP_889598.1	ortholog of Bordetella pertussis (BX470248) BP2646
NP_889599.1	ortholog of Bordetella pertussis (BX470248) BP2647
NP_889600.1	ortholog of Bordetella pertussis (BX470248) BP2648
NP_889601.1	ortholog of Bordetella pertussis (BX470248) BP2649
NP_889602.1	ortholog of Bordetella pertussis (BX470248) BP2650
NP_889603.1	ortholog of Bordetella pertussis (BX470248) BP2651
NP_889604.1	ortholog of Bordetella pertussis (BX470248) BP2652
NP_889605.1	ortholog of Bordetella pertussis (BX470248) BP2653
NP_889606.1	ortholog of Bordetella pertussis (BX470248) BP2654
NP_889607.1	ortholog of Bordetella pertussis (BX470248) BP2655
NP_889608.1	ortholog of Bordetella pertussis (BX470248) BP2656
NP_889609.1	ortholog of Bordetella pertussis (BX470248) BP2657
NP_889610.1	ortholog of Bordetella pertussis (BX470248) BP2658
NP_889611.1	ortholog of Bordetella pertussis (BX470248) BP2659
NP_889612.1	ortholog of Bordetella pertussis (BX470248) BP2660
NP_889613.1	ortholog of Bordetella pertussis (BX470248) BP2661
NP_889614.1	ortholog of Bordetella pertussis (BX470248) BP2662
NP_889615.1	ortholog of Bordetella pertussis (BX470248) BP2663
NP_889616.1	ortholog of Bordetella pertussis (BX470248) BP2664
NP_889617.1	ortholog of Bordetella pertussis (BX470248) BP2665
NP_889621.1	Displays esterase activity toward palmitoyl-CoA and pNP-butyrate
NP_889624.1	DNA polymerase involved in damage-induced mutagenesis and translesion synthesis. It is not the major replicative DNA polymerase.
NP_889625.1	catalyzes the oxidative deamination of D-amino acids
NP_889626.1	ortholog of Bordetella pertussis (BX470248) BP2211
NP_889627.1	flavohemoprotein; catalyzes the formation of nitrate from nitric oxide; can also catalyze the reduction of dihydropteridine
NP_889628.1	ortholog of Bordetella pertussis (BX470248) BP2213
NP_889629.1	involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function
NP_889630.1	ortholog of Bordetella pertussis (BX470248) BP0908
NP_889631.1	ortholog of Bordetella pertussis (BX470248) BP0907
NP_889632.1	ortholog of Bordetella pertussis (BX470248) BP0906
NP_889633.1	ortholog of Bordetella pertussis (BX470248) BP0905
NP_889634.1	ortholog of Bordetella pertussis (BX470248) BP0904
NP_889635.1	ortholog of Bordetella pertussis (BX470248) BP0903
NP_889636.1	ortholog of Bordetella pertussis (BX470248) BP0902
NP_889637.1	ortholog of Bordetella pertussis (BX470248) BP0901
NP_889638.1	ortholog of Bordetella pertussis (BX470248) BP0900
NP_889639.1	ortholog of Bordetella pertussis (BX470248) BP0899
NP_889640.1	ortholog of Bordetella pertussis (BX470248) BP0898
NP_889641.1	ortholog of Bordetella pertussis (BX470248) BP0896
NP_889642.1	ortholog of Bordetella pertussis (BX470248) BP0895
NP_889643.1	ortholog of Bordetella pertussis (BX470248) BP0894
NP_889644.1	ortholog of Bordetella pertussis (BX470248) BP0893
NP_889645.1	ortholog of Bordetella pertussis (BX470248) BP0892
NP_889663.1	protein involved in resistance to different drugs (tetracycline, chloramphenicol, beta-lactams, and quinolones); part of the multiple antibiotic resistance (mar) locus, which is composed by the genes marC and marRAB; unknown function
NP_889672.1	ortholog of Bordetella pertussis (BX470248) BP2103
NP_889673.1	ortholog of Bordetella pertussis (BX470248) BP2102
NP_889674.1	ortholog of Bordetella pertussis (BX470248) BP2101
NP_889675.1	ortholog of Bordetella pertussis (BX470248) BP2100
NP_889676.1	ortholog of Bordetella pertussis (BX470248) BP2099
NP_889677.1	ortholog of Bordetella pertussis (BX470248) BP2098
NP_889678.1	ortholog of Bordetella pertussis (BX470248) BP2097
NP_889679.1	ortholog of Bordetella pertussis (BX470248) BP2096
NP_889680.1	ortholog of Bordetella pertussis (BX470248) BP2095
NP_889681.1	ortholog of Bordetella pertussis (BX470248) BP2094
NP_889682.1	ortholog of Bordetella pertussis (BX470248) BP2093
NP_889683.1	ortholog of Bordetella pertussis (BX470248) BP2092
NP_889684.1	ortholog of Bordetella pertussis (BX470248) BP2091
NP_889685.1	ortholog of Bordetella pertussis (BX470248) BP2090
NP_889686.1	ortholog of Bordetella pertussis (BX470248) BP2089
NP_889687.1	ortholog of Bordetella pertussis (BX470248) BP2088+BP1648
NP_889688.1	ortholog of Bordetella pertussis (BX470248) BP1649
NP_889689.1	ortholog of Bordetella pertussis (BX470248) BP1650
NP_889690.1	ortholog of Bordetella pertussis (BX470248) BP1651
NP_889691.1	ortholog of Bordetella pertussis (BX470248) BP1652
NP_889695.1	ortholog of Bordetella pertussis (BX470248) BP2182
NP_889697.1	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria
NP_889698.1	ortholog of Bordetella pertussis (BX470248) BP2185
NP_889699.2	a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA
NP_889700.1	ortholog of Bordetella pertussis (BX470248) BP2187
NP_889701.1	catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis
NP_889702.1	May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
NP_889703.1	ortholog of Bordetella pertussis (BX470248) BP2190
NP_889704.1	ortholog of Bordetella pertussis (BX470248) BP2191
NP_889705.1	ortholog of Bordetella pertussis (BX470248) BP2192
NP_889706.1	Stimulates the elongation of poly(A) tails
NP_889707.1	catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis
NP_889708.1	EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains
NP_889709.1	ortholog of Bordetella pertussis (BX470248) BP2196
NP_889710.1	ortholog of Bordetella pertussis (BX470248) BP2197
NP_889711.1	catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG
NP_889712.1	catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis
NP_889713.1	ortholog of Bordetella pertussis (BX470248) BP2200
NP_889714.1	ortholog of Bordetella pertussis (BX470248) BP2201
NP_889715.1	catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate
NP_889716.1	valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain
NP_889717.1	ortholog of Bordetella pertussis (BX470248) BP2204
NP_889718.1	ortholog of Bordetella pertussis (BX470248) BP2205
NP_889719.1	ortholog of Bordetella pertussis (BX470248) BP2206
NP_889720.1	ortholog of Bordetella pertussis (BX470248) BP1843
NP_889721.1	ortholog of Bordetella pertussis (BX470248) BP1842
NP_889722.1	methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA
NP_889723.1	Essential for efficient processing of 16S rRNA
NP_889724.2	binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity
NP_889725.1	ortholog of Bordetella pertussis (BX470248) BP1838
NP_889726.1	ortholog of Bordetella pertussis (BX470248) BP1837
NP_889727.1	Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
NP_889728.1	ortholog of Bordetella pertussis (BX470248) BP1835
NP_889729.1	ortholog of Bordetella pertussis (BX470248) BP1834
NP_889730.1	ortholog of Bordetella pertussis (BX470248) BP1833
NP_889731.1	ortholog of Bordetella pertussis (BX470248) BP1832
NP_889732.1	ortholog of Bordetella pertussis (BX470248) BP1831
NP_889733.1	ortholog of Bordetella pertussis (BX470248) BP1830
NP_889734.1	ortholog of Bordetella pertussis (BX470248) BP1829
NP_889735.1	ortholog of Bordetella pertussis (BX470248) BP1828
NP_889736.1	ortholog of Bordetella pertussis (BX470248) BP1827
NP_889737.1	ortholog of Bordetella pertussis (BX470248) BP1826
NP_889738.1	ortholog of Bordetella pertussis (BX470248) BP1825
NP_889739.1	ortholog of Bordetella pertussis (BX470248) BP1824
NP_889740.1	ortholog of Bordetella pertussis (BX470248) BP1823
NP_889741.1	ortholog of Bordetella pertussis (BX470248) BP1822
NP_889742.1	ortholog of Bordetella pertussis (BX470248) BP1821
NP_889743.1	ortholog of Bordetella pertussis (BX470248) BP1820
NP_889744.1	ortholog of Bordetella pertussis (BX470248) BP1819
NP_889745.1	ortholog of Bordetella pertussis (BX470248) BP1818
NP_889746.1	catalyzes the formation of 3,6-dideoxy-D-glycero-D-glycero-4-hexulose
NP_889747.1	Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5)
NP_889748.1	ortholog of Bordetella pertussis (BX470248) BP1815
NP_889749.1	ortholog of Bordetella pertussis (BX470248) BP1814
NP_889750.1	ortholog of Bordetella pertussis (BX470248) BP1813
NP_889751.1	ortholog of Bordetella pertussis (BX470248) BP1812
NP_889752.1	transports degraded pectin products into the bacterial cell
NP_889754.1	N-acetyldiaminobutyrate dehydratase; catalyzes the formation of the osmoprotectant ecotoine from gamma-N-acetyl-alpha,gamma-diaminobutyric acid
NP_889755.1	catalyzes the reversible formation of diaminobutyrate and 2-oxoglutarate from glutamate and L-aspartic beta-semialdehyde
NP_889756.1	ortholog of Bordetella pertussis (BX470248) BP2215
NP_889757.1	ortholog of Bordetella pertussis (BX470248) BP2216
NP_889758.1	ortholog of Bordetella pertussis (BX470248) BP2217
NP_889759.1	ortholog of Bordetella pertussis (BX470248) BP2218
NP_889760.1	ortholog of Bordetella pertussis (BX470248) BP2219
NP_889761.1	ortholog of Bordetella pertussis (BX470248) BP2220
NP_889762.1	ortholog of Bordetella pertussis (BX470248) BP1267
NP_889763.1	decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling
NP_889764.1	ortholog of Bordetella pertussis (BX470248) BP1265
NP_889765.1	decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling
NP_889766.1	ortholog of Bordetella pertussis (BX470248) BP1263
NP_889767.1	An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes
NP_889768.1	ortholog of Bordetella pertussis (BX470248) BP1261
NP_889769.1	catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme
NP_889770.1	ortholog of Bordetella pertussis (BX470248) BP1259
NP_889771.1	ortholog of Bordetella pertussis (BX470248) BP1258
NP_889772.1	ortholog of Bordetella pertussis (BX470248) BP1257
NP_889773.1	ortholog of Bordetella pertussis (BX470248) BP1256
NP_889774.1	ortholog of Bordetella pertussis (BX470248) BP1255
NP_889775.1	has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair
NP_889776.1	ortholog of Bordetella pertussis (BX470248) BP1253
NP_889777.1	ortholog of Bordetella pertussis (BX470248) BP1252
NP_889778.1	ortholog of Bordetella pertussis (BX470248) BP1251
NP_889779.1	ortholog of Bordetella pertussis (BX470248) BP1250
NP_889780.1	catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs
NP_889781.1	associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock
NP_889782.1	Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
NP_889783.1	modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination
NP_889784.1	in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins
NP_889785.1	ortholog of Bordetella pertussis (BX470248) BP1244
NP_889786.1	ortholog of Bordetella pertussis (BX470248) BP1243
NP_889787.1	ortholog of Bordetella pertussis (BX470248) BP1242
NP_889788.1	ortholog of Bordetella pertussis (BX470248) BP1241
NP_889789.1	ortholog of Bordetella pertussis (BX470248) BP1240
NP_889790.1	ortholog of Bordetella pertussis (BX470248) BP1239
NP_889791.1	ortholog of Bordetella pertussis (BX470248) BP1238
NP_889792.1	catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway
NP_889793.1	ortholog of Bordetella pertussis (BX470248) BP1236
NP_889794.1	Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase
NP_889795.1	ortholog of Bordetella pertussis (BX470248) BP1234
NP_889796.1	ortholog of Bordetella pertussis (BX470248) BP1233
NP_889797.1	RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome
NP_889798.1	ortholog of Bordetella pertussis (BX470248) BP1231
NP_889799.1	ortholog of Bordetella pertussis (BX470248) BP1230
NP_889800.1	ortholog of Bordetella pertussis (BX470248) BP1229
NP_889801.1	ortholog of Bordetella pertussis (BX470248) BP1228
NP_889802.1	Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents
NP_889803.1	ortholog of Bordetella pertussis (BX470248) BP1226
NP_889804.2	Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription
NP_889805.1	ortholog of Bordetella pertussis (BX470248) BP1223
NP_889806.1	ortholog of Bordetella pertussis (BX470248) BP1222
NP_889807.1	ortholog of Bordetella pertussis (BX470248) BP1221
NP_889808.1	ortholog of Bordetella pertussis (BX470248) BP1220
NP_889809.1	ortholog of Bordetella pertussis (BX470248) BP1219
NP_889810.1	ortholog of Bordetella pertussis (BX470248) BP1218
NP_889811.1	may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling
NP_889812.1	ortholog of Bordetella pertussis (BX470248) BP1216
NP_889813.1	ortholog of Bordetella pertussis (BX470248) BP1215
NP_889814.1	ortholog of Bordetella pertussis (BX470248) BP1214
NP_889815.1	ortholog of Bordetella pertussis (BX470248) BP1213
NP_889816.1	ortholog of Bordetella pertussis (BX470248) BP1212
NP_889817.1	ortholog of Bordetella pertussis (BX470248) BP1211
NP_889818.1	ortholog of Bordetella pertussis (BX470248) BP1210
NP_889819.1	ortholog of Bordetella pertussis (BX470248) BP1209
NP_889820.1	ortholog of Bordetella pertussis (BX470248) BP1208
NP_889821.1	ortholog of Bordetella pertussis (BX470248) BP1207
NP_889822.1	ortholog of Bordetella pertussis (BX470248) BP1206
NP_889823.1	ortholog of Bordetella pertussis (BX470248) BP1205
NP_889824.1	ortholog of Bordetella pertussis (BX470248) BP1204
NP_889825.1	ortholog of Bordetella pertussis (BX470248) BP1203
NP_889826.1	ortholog of Bordetella pertussis (BX470248) BP1202
NP_889827.1	ortholog of Bordetella pertussis (BX470248) BP1200
NP_889828.1	ortholog of Bordetella pertussis (BX470248) BP1198
NP_889829.1	ortholog of Bordetella pertussis (BX470248) BP1197
NP_889830.1	ortholog of Bordetella pertussis (BX470248) BP1196
NP_889831.1	ortholog of Bordetella pertussis (BX470248) BP1195
NP_889832.1	ortholog of Bordetella pertussis (BX470248) BP1194
NP_889833.1	ortholog of Bordetella pertussis (BX470248) BP1193
NP_889834.1	ortholog of Bordetella pertussis (BX470248) BP1192
NP_889835.1	Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription
NP_889836.1	ortholog of Bordetella pertussis (BX470248) BP1190
NP_889837.1	ortholog of Bordetella pertussis (BX470248) BP1189
NP_889838.1	ortholog of Bordetella pertussis (BX470248) BP1188A
NP_889839.1	ortholog of Bordetella pertussis (BX470248) BP1188
NP_889840.1	ortholog of Bordetella pertussis (BX470248) BP1186
NP_889841.1	ortholog of Bordetella pertussis (BX470248) BP1185
NP_889842.1	ortholog of Bordetella pertussis (BX470248) BP1184
NP_889843.1	ortholog of Bordetella pertussis (BX470248) BP1183
NP_889844.1	ortholog of Bordetella pertussis (BX470248) BP1182
NP_889845.1	ortholog of Bordetella pertussis (BX470248) BP1181
NP_889846.1	ortholog of Bordetella pertussis (BX470248) BP1180
NP_889847.1	ortholog of Bordetella pertussis (BX470248) BP1178
NP_889853.1	ortholog of Bordetella pertussis (BX470248) BP2180
NP_889854.1	ortholog of Bordetella pertussis (BX470248) BP2179
NP_889855.1	ortholog of Bordetella pertussis (BX470248) BP2178
NP_889856.1	ortholog of Bordetella pertussis (BX470248) BP2177
NP_889857.1	ortholog of Bordetella pertussis (BX470248) BP2176
NP_889858.1	ortholog of Bordetella pertussis (BX470248) BP2175
NP_889859.1	ortholog of Bordetella pertussis (BX470248) BP2174
NP_889860.1	ortholog of Bordetella pertussis (BX470248) BP2173
NP_889861.1	ortholog of Bordetella pertussis (BX470248) BP2172
NP_889862.1	ortholog of Bordetella pertussis (BX470248) BP2171
NP_889863.1	CcoO; FixO
NP_889864.1	CcoN; FixN
NP_889865.1	ortholog of Bordetella pertussis (BX470248) BP2168
NP_889866.1	ortholog of Bordetella pertussis (BX470248) BP2167
NP_889867.1	catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate
NP_889868.1	ortholog of Bordetella pertussis (BX470248) BP2164
NP_889869.1	ortholog of Bordetella pertussis (BX470248) BP2163
NP_889870.1	ortholog of Bordetella pertussis (BX470248) BP2162
NP_889871.1	ortholog of Bordetella pertussis (BX470248) BP2161
NP_889872.1	ortholog of Bordetella pertussis (BX470248) BP2160
NP_889873.1	ortholog of Bordetella pertussis (BX470248) BP2086
NP_889874.1	Catalyzes the first step in the glyoxalate cycle, which converts lipids to carbohydrates
NP_889875.2	catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis
NP_889876.1	ortholog of Bordetella pertussis (BX470248) BP2083
NP_889877.1	ortholog of Bordetella pertussis (BX470248) BP2082
NP_889878.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
NP_889879.1	hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides
NP_889880.1	Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids
NP_889881.1	involved in the de novo synthesis of pyridoxine (Vitamin B6)
NP_889882.1	ortholog of Bordetella pertussis (BX470248) BP2077
NP_889883.1	ortholog of Bordetella pertussis (BX470248) BP2076
NP_889884.1	ortholog of Bordetella pertussis (BX470248) BP2075
NP_889885.1	ortholog of Bordetella pertussis (BX470248) BP2074
NP_889886.1	ortholog of Bordetella pertussis (BX470248) BP2073
NP_889887.1	ortholog of Bordetella pertussis (BX470248) BP2071
NP_889888.1	ortholog of Bordetella pertussis (BX470248) BP2070
NP_889889.1	ortholog of Bordetella pertussis (BX470248) BP2069
NP_889890.1	ortholog of Bordetella pertussis (BX470248) BP2068
NP_889891.1	ortholog of Bordetella pertussis (BX470248) BP2067
NP_889892.1	ortholog of Bordetella pertussis (BX470248) BP2066
NP_889893.1	catalyzes the formation of malonyl-CoA from malonate and CoA
NP_889894.1	ortholog of Bordetella pertussis (BX470248) BP2063
NP_889895.1	ortholog of Bordetella pertussis (BX470248) BP2062
NP_889896.1	ortholog of Bordetella pertussis (BX470248) BP2061
NP_889897.1	ortholog of Bordetella pertussis (BX470248) BP2060
NP_889898.1	catalyzes the formation of beta-ketovaleryl-CoA from acetyl-CoA and propionyl-CoA
NP_889899.1	ortholog of Bordetella pertussis (BX470248) BP2058
NP_889900.1	ortholog of Bordetella pertussis (BX470248) BP2057
NP_889901.1	ortholog of Bordetella pertussis (BX470248) BP2056
NP_889902.1	ortholog of Bordetella pertussis (BX470248) BP2055
NP_889903.1	ortholog of Bordetella pertussis (BX470248) BP2053
NP_889904.1	ortholog of Bordetella pertussis (BX470248) BP2052
NP_889905.1	required for 70S ribosome assembly
NP_889906.1	in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif
NP_889907.1	ortholog of Bordetella pertussis (BX470248) BP2049
NP_889908.1	ortholog of Bordetella pertussis (BX470248) bph2
NP_889909.1	ortholog of Bordetella pertussis (BX470248) BP2046
NP_889910.1	ortholog of Bordetella pertussis (BX470248) BP2045
NP_889911.1	leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase
NP_889912.1	ortholog of Bordetella pertussis (BX470248) BP2043
NP_889913.1	required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA
NP_889914.1	Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway
NP_889915.1	ortholog of Bordetella pertussis (BX470248) BP2040
NP_889916.1	catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia
NP_889917.1	ortholog of Bordetella pertussis (BX470248) BP2038
NP_889918.1	ortholog of Bordetella pertussis (BX470248) BP2037
NP_889919.1	ortholog of Bordetella pertussis (BX470248) BP2036
NP_889920.1	ortholog of Bordetella pertussis (BX470248) BP2317
NP_889921.1	ortholog of Bordetella pertussis (BX470248) BP2318
NP_889922.1	ortholog of Bordetella pertussis (BX470248) BP2319
NP_889923.1	ortholog of Bordetella pertussis (BX470248) BP2320
NP_889924.1	ortholog of Bordetella pertussis (BX470248) BP2321
NP_889925.1	ortholog of Bordetella pertussis (BX470248) BP2322
NP_889926.1	ortholog of Bordetella pertussis (BX470248) BP2323
NP_889927.1	ortholog of Bordetella pertussis (BX470248) BP2324
NP_889928.1	ortholog of Bordetella pertussis (BX470248) BP2325
NP_889929.1	ortholog of Bordetella pertussis (BX470248) BP2326
NP_889930.1	ortholog of Bordetella pertussis (BX470248) BP2327
NP_889931.1	ortholog of Bordetella pertussis (BX470248) BP2328
NP_889932.1	ortholog of Bordetella pertussis (BX470248) BP2329
NP_889933.1	ortholog of Bordetella pertussis (BX470248) BP2330
NP_889934.1	ortholog of Bordetella pertussis (BX470248) BP2331
NP_889935.1	catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase
NP_889936.1	ortholog of Bordetella pertussis (BX470248) BP2333
NP_889937.1	ortholog of Bordetella pertussis (BX470248) BP2334
NP_889938.1	ortholog of Bordetella pertussis (BX470248) BP2336
NP_889939.1	ortholog of Bordetella pertussis (BX470248) BP2337
NP_889940.1	ortholog of Bordetella pertussis (BX470248) BP2338
NP_889941.1	Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway
NP_889942.1	ortholog of Bordetella pertussis (BX470248) BP2340
NP_889943.1	ortholog of Bordetella pertussis (BX470248) BP2341
NP_889944.1	ortholog of Bordetella pertussis (BX470248) BP2342
NP_889945.1	responsible for recognizing base lesions in the genome and initiating base excision DNA repair
NP_889946.1	ortholog of Bordetella pertussis (BX470248) BP2344
NP_889947.1	ortholog of Bordetella pertussis (BX470248) BP2345
NP_889948.1	ortholog of Bordetella pertussis (BX470248) BP2346
NP_889949.1	ortholog of Bordetella pertussis (BX470248) BP2347
NP_889950.1	ortholog of Bordetella pertussis (BX470248) BP2348
NP_889951.1	catalyzes the phosphorylation of 3-deoxy-D-manno-octulosonic acid at the 4-OH position
NP_889952.1	ortholog of Bordetella pertussis (BX470248) BP2350
NP_889953.1	ortholog of Bordetella pertussis (BX470248) BP2351
NP_889954.1	ortholog of Bordetella pertussis (BX470248) BP2352
NP_889955.1	ortholog of Bordetella pertussis (BX470248) BP2353
NP_889956.1	ortholog of Bordetella pertussis (BX470248) BP2354
NP_889959.1	ortholog of Bordetella pertussis (BX470248) BP2674
NP_889960.1	ortholog of Bordetella pertussis (BX470248) BP2675
NP_889961.1	ortholog of Bordetella pertussis (BX470248) BP2676
NP_889962.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
NP_889963.1	ortholog of Bordetella pertussis (BX470248) BP2678
NP_889964.1	ortholog of Bordetella pertussis (BX470248) BP2680
NP_889965.1	ortholog of Bordetella pertussis (BX470248) BP2681
NP_889966.1	ortholog of Bordetella pertussis (BX470248) BP2682
NP_889967.1	with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; involved in phenylacetate degradation
NP_889968.1	with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA
NP_889969.1	ortholog of Bordetella pertussis (BX470248) BP2685
NP_889970.1	ortholog of Bordetella pertussis (BX470248) BP2686
NP_889971.1	3'-5' exoribonuclease specific for small oligoribonuclotides
NP_889972.1	ortholog of Bordetella pertussis (BX470248) BP2688
NP_889973.1	EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity
NP_889974.1	ortholog of Bordetella pertussis (BX470248) BP0977
NP_889975.1	ortholog of Bordetella pertussis (BX470248) BP0976
NP_889976.1	this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
NP_889977.1	ortholog of Bordetella pertussis (BX470248) BP0974
NP_889978.1	ortholog of Bordetella pertussis (BX470248) BP0973
NP_889979.1	ortholog of Bordetella pertussis (BX470248) BP0972
NP_889980.1	ortholog of Bordetella pertussis (BX470248) BP0971
NP_889981.1	with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP
NP_889982.1	catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite
NP_889983.1	ortholog of Bordetella pertussis (BX470248) BP0969
NP_889984.1	ortholog of Bordetella pertussis (BX470248) BP0968
NP_889985.1	ortholog of Bordetella pertussis (BX470248) BP0967
NP_889986.1	ortholog of Bordetella pertussis (BX470248) BP0966
NP_889987.1	ortholog of Bordetella pertussis (BX470248) BP0965
NP_889988.1	ortholog of Bordetella pertussis (BX470248) BP0964
NP_889989.1	ortholog of Bordetella pertussis (BX470248) BP0962
NP_889990.1	ortholog of Bordetella pertussis (BX470248) BP0961
NP_889991.1	ortholog of Bordetella pertussis (BX470248) BP0960
NP_889992.1	ortholog of Bordetella pertussis (BX470248) BP0959
NP_889993.1	catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide
NP_889994.1	ortholog of Bordetella pertussis (BX470248) BP0956
NP_889995.1	ortholog of Bordetella pertussis (BX470248) BP0955
NP_889996.1	ortholog of Bordetella pertussis (BX470248) BP0954
NP_889997.1	ortholog of Bordetella pertussis (BX470248) BP0953
NP_889998.1	ortholog of Bordetella pertussis (BX470248) BP0952
NP_889999.1	ortholog of Bordetella pertussis (BX470248) BP0951
NP_890000.2	in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins
NP_890001.1	Catalyzes the formation of (d)CDP from ATP and (d)CMP
NP_890002.1	catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis
NP_890003.1	ortholog of Bordetella pertussis (BX470248) BP0947
NP_890004.1	ortholog of Bordetella pertussis (BX470248) BP0946
NP_890005.1	catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine
NP_890006.2	negatively supercoils closed circular double-stranded DNA
NP_890007.1	ortholog of Bordetella pertussis (BX470248) BP0943
NP_890008.1	Involved in ubiquinone biosynthesis
NP_890009.1	ortholog of Bordetella pertussis (BX470248) BP0941
NP_890010.1	ortholog of Bordetella pertussis (BX470248) BP0940
NP_890011.1	Similar to Bacteriophage SPBc2 YoqW protein yoqW SWALL:O64131 (EMBL:AF020713) (224 aa) fasta scores: E(): 1.4e-08, 28.07% id in 228 aa, and to Salmonella typhimurium LT2 gifsy-2 prophage protein stm1053 SWALL:Q8ZQ78 (EMBL:AE008743) (208 aa) fasta scores: E(): 1.8e-16, 37.91% id in 182 aa
NP_890012.1	no significant database matches
NP_890013.1	no significant database matches
NP_890014.1	no significant database matches
NP_890015.1	Similar to Bacteriophage H19B lysozyme R SWALL:LYCV_BPH19 (SWALL:Q9ZXB7) (177 aa) fasta scores: E(): 0.011, 28.41% id in 183 aa, and to Escherichia coli O157:H7  lysozyme r of prophage cp-933r z2371 or ecs2741 SWALL:Q8X4U1 (EMBL:AE005369) (177 aa) fasta scores: E(): 0.012, 28.41% id in 183 aa
NP_890016.1	Similar to Serratia marcescens phage-holin analog protein regA SWALL:Q54422 (EMBL:U31763) (88 aa) fasta scores: E(): 1.2, 30.13% id in 73 aa, and to Serratia marcescens extracellular secretory protein nucE SWALL:Q54418 (EMBL:U11698) (89 aa) fasta scores: E(): 1.2, 30.3% id in 66 aa
NP_890017.1	no significant database matches
NP_890018.1	no significant database matches
NP_890019.1	no significant database matches
NP_890020.1	Weakly similar to Bacteriophage D3 Orf26 orf26 SWALL:Q9MC95 (EMBL:AF165214) (909 aa) fasta scores: E(): 4.8e-23, 25.98% id in 689 aa
NP_890021.1	Similar to Bacteriophage D3 Orf25 SWALL:Q9MC96 (EMBL:AF165214) (135 aa) fasta scores: E(): 0.00047, 30.46% id in 128 aa
NP_890022.1	Similar to Bacteriophage D3 Orf22 SWALL:Q9MC99 (EMBL:AF165214) (163 aa) fasta scores: E(): 0.091, 25.43% id in 173 aa
NP_890023.1	Similar to Bacteriophage D3 Orf21 SWALL:Q9MCA0 (EMBL:AF165214) (159 aa) fasta scores: E(): 0.00045, 31.37% id in 102 aa
NP_890024.1	Similar to Ralstonia solanacearum probable phage hk97 tail length tape measure-related protein rsc1690 or rs04085 SWALL:Q8XYR8 (EMBL:AL646065) (957 aa) fasta scores: E(): 1.4e-47, 35.26% id in 913 aa, and to Bacteriophage N15 gp16 gene 16 SWALL:O64330 (EMBL:AF064539) (838 aa) fasta scores: E(): 1.2e-28, 28.1% id in 861 aa
NP_890025.1	Similar to Yersinia pestis hypothetical phage protein Ypo2118 SWALL:Q8ZEP2 (EMBL:AJ414151) (73 aa) fasta scores: E(): 1.3e-08, 52.05% id in 73 aa
NP_890026.1	Similar to Yersinia pestis hypothetical phage protein Ypo2117 SWALL:Q8ZEP3 (EMBL:AJ414151) (103 aa) fasta scores: E(): 2.7e-07, 36.79% id in 106 aa
NP_890027.1	Similar to Ralstonia solanacearum hypothetical protein rsc1689 or rs04083 SWALL:Q8XYR9 (EMBL:AL646065) (217 aa) fasta scores: E(): 4.3e-22, 41.07% id in 168 aa
NP_890028.1	Similar to Bacteriophage phiYeO3-12  1.45 protein 1.45 SWALL:Q9T140 (EMBL:AJ251805) (157 aa) fasta scores: E(): 2.6e-06, 36.06% id in 122 aa, and to Escherichia coli O157:H7 hypothetical protein z3935 z3935 or ecs3504 SWALL:Q8X989 (EMBL:AE005493) (201 aa) fasta scores: E(): 2.1e-14, 37.5% id in 144 aa
NP_890029.1	Similar to Yersinia pestis hypothetical phage protein Ypo2115 SWALL:Q8ZEP5 (EMBL:AJ414151) (135 aa) fasta scores: E(): 5.8e-10, 34.58% id in 133 aa, and to Rhizobium loti hypothetical protein Mlr8015 SWALL:Q984G5 (EMBL:AP003013) (137 aa) fasta scores: E(): 8.8e-06, 33.91% id in 115 aa
NP_890030.1	Similar to Yersinia pestis hypothetical phage protein Ypo2114 SWALL:Q8ZEP6 (EMBL:AJ414151) (194 aa) fasta scores: E(): 1.8e-08, 36.93% id in 111 aa
NP_890031.1	Similar to Rhizobium loti hypothetical protein Mlr8012 SWALL:Q984G8 (EMBL:AP003013) (130 aa) fasta scores: E(): 6.8, 26.82% id in 123 aa
NP_890032.1	no significant database matches
NP_890033.1	Similar to Yersinia pestis hypothetical phage protein Ypo2111 SWALL:Q8ZEP9 (EMBL:AJ414151) (176 aa) fasta scores: E(): 4.1, 26.94% id in 167 aa
NP_890034.1	no significant database matches
NP_890035.1	Similar to Yersinia pestis  phage protein ypo2110 SWALL:Q8ZEQ0 (EMBL:AJ414151) (401 aa) fasta scores: E(): 1.1e-09, 27.98% id in 318 aa, and to Bacteriophage SPP1 coat protein 13 SWALL:Q38582 (EMBL:X89721) (324 aa) fasta scores: E(): 0.061, 25.75% id in 198 aa
NP_890036.1	no significant database matches
NP_890037.1	no significant database matches
NP_890038.1	Similar to Yersinia pestis hypothetical phage protein ypo2108 ypo2108 or y2207 SWALL:Q8ZEQ2 (EMBL:AJ414151) (370 aa) fasta scores: E(): 1.4e-40, 39.14% id in 350 aa
NP_890039.1	Similar to Bacteriophage MB78 60 kDa protein gp62 SWALL:Q9T0Q3 (EMBL:Y19202) (540 aa) fasta scores: E(): 2.1e-31, 31.2% id in 455 aa
NP_890040.1	Similar to Bacillus subtilis pbsx phage terminase large subunit xtmB SWALL:XTMB_BACSU (SWALL:P39786) (433 aa) fasta scores: E(): 0.2, 21.58% id in 417 aa, and to Yersinia pestis hypothetical 47.8 kDa protein y1030 or ypmt1.24C SWALL:O68741 (EMBL:AF074611) (418 aa) fasta scores: E(): 2.6e-17, 27.75% id in 436 aa
NP_890041.1	Similar to Lactobacillus delbrueckii  DNA binding protein SWALL:Q8VN11 (EMBL:AJ421486) (112 aa) fasta scores: E(): 0.0039, 31.81% id in 88 aa
NP_890042.1	no significant database matches
NP_890043.1	no significant database matches
NP_890044.1	Similar to bacteriophage WO hypothetical 16.7 kDa protein gp11 SWALL:Q9JMN0 (EMBL:AB036666) (151 aa) fasta scores: E(): 1.7e-13, 36.61% id in 142 aa, and to Ralstonia solanacearum  bacteriophage-related protein rsc3228 or rs02445 SWALL:Q8XUG0 (EMBL:AL646074) (154 aa) fasta scores: E(): 1.1e-21, 46.35% id in 151 aa
NP_890045.1	no significant database matches
NP_890046.1	no significant database matches
NP_890047.1	Similar to Salmonella typhi hypothetical protein Sty2063 sty2063 SWALL:Q8Z5Z8 (EMBL:AL627272) (262 aa) fasta scores: E(): 1.5e-07, 24.43% id in 266 aa, and to Escherichia coli O157:H7 hypothetical protein z2397 z2397 or ecs1944 SWALL:Q8X8R8 (EMBL:AE005370) (262 aa) fasta scores: E(): 1.7e-06, 25.46% id in 267 aa
NP_890048.1	Similar to Bacteriophage phiE125 gp63 63 SWALL:Q8W6N7 (EMBL:AF447491) (112 aa) fasta scores: E(): 9.3e-12, 45.09% id in 102 aa, and to Bacteriophage HK97 gp66 66 SWALL:Q9MCN9 (EMBL:AF069529) (96 aa) fasta scores: E(): 1.1, 30.76% id in 65 aa
NP_890049.1	Similar to Bacteriophage 933W hypothetical 17.4 kDa protein l0093 SWALL:Q9T207 (EMBL:AF125520) (148 aa) fasta scores: E(): 0.017, 27.33% id in 139 aa, and to Yersinia pestis  phage protein ninb or ypo2089 SWALL:Q8ZER6 (EMBL:AJ414151) (142 aa) fasta scores: E(): 0.00066, 31.34% id in 134 aa
NP_890050.1	Similar to Bacteriophage D3 CII SWALL:Q37905 (EMBL:AF165214) (102 aa) fasta scores: E(): 0.077, 27.18% id in 103 aa, and to Salmonella typhimurium, and Salmonella typhi hypothetical 13.7 kDa protein stm2627 or stm1013 or sty1021 SWALL:O84891 (EMBL:AF001386) (124 aa) fasta scores: E(): 0.00011, 40.21% id in 92 aa
NP_890051.1	no significant database matches
NP_890052.1	no significant database matches
NP_890053.1	no significant database matches
NP_890054.1	no significant database matches
NP_890055.1	no significant database matches
NP_890056.1	Similar to Bacteriophage P22 regulatory protein Cro SWALL:RCRO_BPP22 (SWALL:P09964) (61 aa) fasta scores: E(): 3, 34.04% id in 47 aa, and to Bacteriophage 21 Cro protein SWALL:Q9XJP6 (EMBL:AJ237660) (61 aa) fasta scores: E(): 2.5, 32.14% id in 56 aa
NP_890057.1	Similar to Bacteriophage 434 repressor protein CI SWALL:RPC1_BP434 (SWALL:P16117) (94 aa) fasta scores: E(): 4.6, 32.53% id in 83 aa, and to Streptococcus thermophilus hypothetical transcriptional regulator arp2 SWALL:Q935U1 (EMBL:AJ278471) (111 aa) fasta scores: E(): 0.053, 41.93% id in 62 aa
NP_890058.1	Similar to the N-terminal region of Neisseria meningitidis transcriptional regulator nmb0910 SWALL:Q9JZT1 (EMBL:AE002442) (238 aa) fasta scores: E(): 0.0086, 34.92% id in 63 aa
NP_890059.1	no significant database matches
NP_890060.1	no significant database matches
NP_890061.1	no significant database matches
NP_890062.1	no significant database matches
NP_890063.1	no significant database matches
NP_890064.1	no significant database matches
NP_890065.1	no significant database matches
NP_890066.1	Similar to Caulobacter crescentus hypothetical protein Cc1139 cc1139 SWALL:Q9A955 (EMBL:AE005792) (57 aa) fasta scores: E(): 2.3, 36.36% id in 44 aa, and to Anabaena sp. hypothetical protein Asl3923 asl3923 SWALL:Q8YQB0 (EMBL:AP003594) (53 aa) fasta scores: E(): 1.8, 34.21% id in 38 aa
NP_890068.1	Similar to Bacteriophage HK620 hypothetical 25.6 kDa protein hkaL SWALL:Q9AZ29 (EMBL:AF335538) (226 aa) fasta scores: E(): 5.9e-44, 55.34% id in 215 aa
NP_890069.1	no significant database matches
NP_890070.1	Similar to Bacteriophage PSA gp46 protein SWALL:Q8W5W1 (EMBL:AJ312240) (159 aa) fasta scores: E(): 4.9e-08, 32.92% id in 164 aa, and to Staphylococcus aureus prophage phiPV83 orf 16 SWALL:Q9MBS3 (EMBL:AB044554) (159 aa) fasta scores: E(): 1.4e-08, 31.09% id in 164 aa
NP_890071.1	no significant database matches
NP_890072.1	no significant database matches
NP_890073.1	Similar to Streptomyces coelicolor hypothetical protein sco1532 sco1532 or scl2.22C SWALL:Q9L277 (EMBL:AL137778) (425 aa) fasta scores: E(): 0.16, 25.69% id in 358 aa
NP_890074.1	no significant database matches
NP_890075.1	Weakly similar to Xanthomonas axonopodis virulence regulator xrva or xac3256 SWALL:AAM38100 (EMBL:AE011971) (130 aa) fasta scores: E(): 10, 34.04% id in 47 aa
NP_890076.1	no significant database matches
NP_890077.1	Similar to Yersinia pestis  phage excisionase ypo2087 SWALL:Q8ZER9 (EMBL:AJ414151) (86 aa) fasta scores: E(): 0.31, 33.33% id in 69 aa, and to Salmonella typhimurium, and Salmonella typhi gifsy-2 prophage, excisionase stm1006 or xis or sty1012 SWALL:Q8XGN6 (EMBL:AE008743) (82 aa) fasta scores: E(): 2.7, 30.98% id in 71 aa
NP_890078.1	Similar to Salmonella typhimurium gifsy-2 prophage, integrase stm1005 SWALL:Q8ZQB0 (EMBL:AE008743) (430 aa) fasta scores: E(): 5.8e-10, 29.01% id in 417 aa, and to Escherichia coli O157:H7  integrase within cp-933o, partial z2084 or ecs2217 SWALL:Q8XC61 (EMBL:AE005346) (183 aa) fasta scores: E(): 6.8e-09, 39.85% id in 138 aa
NP_890079.1	ortholog of Bordetella pertussis (BX470248) BP0936
NP_890080.1	ortholog of Bordetella pertussis (BX470248) BP0935
NP_890081.1	ortholog of Bordetella pertussis (BX470248) BP0934
NP_890082.1	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation
NP_890083.1	ortholog of Bordetella pertussis (BX470248) BP0932
NP_890084.1	ortholog of Bordetella pertussis (BX470248) BP0931
NP_890085.1	ortholog of Bordetella pertussis (BX470248) BP0930
NP_890086.1	ortholog of Bordetella pertussis (BX470248) BP0929
NP_890087.1	ortholog of Bordetella pertussis (BX470248) BP0928
NP_890088.1	ortholog of Bordetella pertussis (BX470248) BP0927
NP_890089.1	ortholog of Bordetella pertussis (BX470248) BP0926
NP_890090.1	ortholog of Bordetella pertussis (BX470248) BP0925
NP_890091.1	ortholog of Bordetella pertussis (BX470248) BP0924
NP_890092.1	ortholog of Bordetella pertussis (BX470248) BP0923
NP_890093.1	ortholog of Bordetella pertussis (BX470248) BP0922
NP_890094.1	ortholog of Bordetella pertussis (BX470248) BP0921
NP_890095.1	catalyzes the oxidation of tricarballylate to cis-aconitate; FAD-dependent; required for the utilization of tricarballylate as a carbon and energy source by S. enterica
NP_890096.1	ortholog of Bordetella pertussis (BX470248) BP0919
NP_890097.1	ortholog of Bordetella pertussis (BX470248) BP0918
NP_890098.1	ortholog of Bordetella pertussis (BX470248) BP0916
NP_890099.1	ortholog of Bordetella pertussis (BX470248) BP0915
NP_890100.1	ortholog of Bordetella pertussis (BX470248) BP0914
NP_890101.1	ortholog of Bordetella pertussis (BX470248) BP0913
NP_890102.1	ortholog of Bordetella pertussis (BX470248) BP0912
NP_890103.1	ortholog of Bordetella pertussis (BX470248) BP0911
NP_890104.1	ortholog of Bordetella pertussis (BX470248) BP0910A
NP_890113.1	ortholog of Bordetella pertussis (BX470248) BP1747
NP_890114.1	ortholog of Bordetella pertussis (BX470248) BP1746
NP_890115.1	ortholog of Bordetella pertussis (BX470248) BP1745
NP_890116.1	ortholog of Bordetella pertussis (BX470248) BP1744
NP_890117.1	ortholog of Bordetella pertussis (BX470248) BP1743
NP_890118.1	ortholog of Bordetella pertussis (BX470248) BP1741
NP_890119.1	catalyze the formation of cyanophycin which may act to store excess nitrogen
NP_890120.1	catalyze the formation of cyanophycin which may act to store excess nitrogen
NP_890121.1	ortholog of Bordetella pertussis (BX470248) BP1738
NP_890122.1	ortholog of Bordetella pertussis (BX470248) BP1737
NP_890123.1	ortholog of Bordetella pertussis (BX470248) BP1736
NP_890124.1	ortholog of Bordetella pertussis (BX470248) BP1156
NP_890125.1	ortholog of Bordetella pertussis (BX470248) BP1155
NP_890126.1	ortholog of Bordetella pertussis (BX470248) BP1154
NP_890127.1	ortholog of Bordetella pertussis (BX470248) BP1153
NP_890128.1	ortholog of Bordetella pertussis (BX470248) BP1152
NP_890129.1	ortholog of Bordetella pertussis (BX470248) BP1151
NP_890130.1	catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
NP_890131.1	ortholog of Bordetella pertussis (BX470248) BP1149
NP_890132.1	ortholog of Bordetella pertussis (BX470248) BP1148
NP_890133.1	ortholog of Bordetella pertussis (BX470248) BP1147
NP_890134.1	ortholog of Bordetella pertussis (BX470248) BP1146
NP_890135.1	ortholog of Bordetella pertussis (BX470248) BP1145
NP_890136.1	ortholog of Bordetella pertussis (BX470248) BP1144
NP_890137.1	catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
NP_890138.1	ortholog of Bordetella pertussis (BX470248) BP1141
NP_890139.1	ortholog of Bordetella pertussis (BX470248) BP1140
NP_890140.1	ortholog of Bordetella pertussis (BX470248) BP1139
NP_890141.1	Similar to Escherichia coli shufflon-specific DNA recombinase rcI SWALL:RCI1_ECOLI (SWALL:P10487) (384 aa) fasta scores: E(): 8.4e-10, 37.03% id in 324 aa, and to Xanthomonas axonopodis shufflon-specific recombinase rci or xac2418 SWALL:AAM37269 (EMBL:AE011879) (315 aa) fasta scores: E(): 2.1e-51, 48.88% id in 313 aa
NP_890142.1	Similar to Chlorella virus NC-1A modification methylase cvibi cvibiM SWALL:MTC1_CHVN1 (SWALL:Q01511) (260 aa) fasta scores: E(): 3.4e-13, 28.84% id in 260 aa, and to Bacteriophage phiE125 gp27 27 SWALL:Q8W6S4 (EMBL:AF447491) (262 aa) fasta scores: E(): 3.5e-81, 68.82% id in 263 aa
NP_890143.1	Similar to Ralstonia solanacearum  tail fiber assembly-like protein rsc1920 or rs03489 SWALL:Q8XY43 (EMBL:AL646067) (250 aa) fasta scores: E(): 2.8, 29.8% id in 104 aa, and to Yersinia pestis lambda tail fiber assembly protein g y1053 or ypmt1.03C SWALL:O68721 (EMBL:AF074611) (202 aa) fasta scores: E(): 0.6, 29.12% id in 103 aa
NP_890144.1	no significant database matches
NP_890145.1	Similar to Yersinia pestis  bacteriophage tail fiber protein stf or ypo1252 SWALL:Q8ZGN4 (EMBL:AJ414147) (259 aa) fasta scores: E(): 0.013, 30% id in 140 aa
NP_890146.1	Similar to Bacteriophage SfV tail protein orf20 SWALL:O22003 (EMBL:U82619) (194 aa) fasta scores: E(): 1.3e-08, 30.3% id in 198 aa, and to Neisseria meningitidis hypothetical protein Nma1324 nma1324 SWALL:Q9JUG4 (EMBL:AL162755) (186 aa) fasta scores: E(): 2.3e-26, 43.85% id in 187 aa
NP_890147.1	Similar to Bacteriophage SfV tail protein orf19 SWALL:Q8SBG4 (EMBL:U82619) (352 aa) fasta scores: E(): 4.5e-16, 30.44% id in 335 aa, and to Neisseria meningitidis hypothetical protein Nma1323 nma1323 SWALL:Q9JUG5 (EMBL:AL162755) (351 aa) fasta scores: E(): 4.4e-55, 47.14% id in 350 aa
NP_890148.1	Similar to Neisseria meningitidis hypothetical protein Nma1322 nma1322 SWALL:Q9JUG6 (EMBL:AL162755) (115 aa) fasta scores: E(): 8.8e-20, 54.31% id in 116 aa, and to Haemophilus influenzae mu-like prophage flumu protein gp46 hi1519 SWALL:VG46_HAEIN (SWALL:P44239) (135 aa) fasta scores: E(): 0.02, 36% id in 100 aa
NP_890149.1	Similar to Neisseria meningitidis hypothetical protein nma1321 nma1321 or nmb1111 SWALL:Q9JQQ9 (EMBL:AL162755) (222 aa) fasta scores: E(): 7.4e-29, 43.06% id in 209 aa, and to Bacteriophage Mu protein gp45 45 SWALL:VG45_BPMU (SWALL:Q9T1V4) (197 aa) fasta scores: E(): 3.9e-06, 30.37% id in 214 aa
NP_890150.1	Similar to Bacteriophage SfV tail protein orf16 SWALL:Q8SBG7 (EMBL:U82619) (359 aa) fasta scores: E(): 1.6e-13, 27.02% id in 370 aa, and to Neisseria meningitidis hypothetical protein nma1830 nma1830 or rth43 SWALL:Q9JRB5 (EMBL:AL162757) (379 aa) fasta scores: E(): 1.9e-68, 53.16% id in 348 aa
NP_890151.1	Similar to Bacteriophage SfV tail/DNA circulation protein orf15 SWALL:Q8SBG8 (EMBL:U82619) (447 aa) fasta scores: E(): 1.2e-08, 25.29% id in 431 aa, and to Neisseria meningitidis hypothetical protein nma1831 nma1831 or rth42 SWALL:Q9JR33 (EMBL:AL162757) (455 aa) fasta scores: E(): 2.1e-32, 35.89% id in 468 aa
NP_890152.1	Similar to Neisseria meningitidis hypothetical DNA-binding protein nma1833 or rth40 SWALL:Q9JQZ6 (EMBL:AL162757) (559 aa) fasta scores: E(): 9.2e-48, 36.51% id in 545 aa, and to Salmonella typhi bacteriophage protein sty1629 SWALL:Q8Z6T7 (EMBL:AL627270) (821 aa) fasta scores: E(): 1.8e-05, 23.12% id in 614 aa
NP_890153.1	no significant database matches
NP_890154.1	Similar to Neisseria meningitidis hypothetical protein nma1835 nma1835 or rth39 SWALL:Q9JQN5 (EMBL:AL162757) (129 aa) fasta scores: E(): 0.00012, 35.18% id in 108 aa
NP_890155.1	Similar to Neisseria meningitidis hypothetical protein Nmb1105 nmb1105 SWALL:Q9JZD3 (EMBL:AE002460) (125 aa) fasta scores: E(): 1.5e-22, 50.4% id in 125 aa, and to Neisseria meningitidis hypothetical protein nma1840 nma1840 or rth36 SWALL:Q9JR01 (EMBL:AL162757) (124 aa) fasta scores: E(): 3.5e-18, 48.76% id in 121 aa
NP_890156.1	Similar to Haemophilus influenzae mu-like prophage flumu tail sheath protein hi1511 SWALL:VPL_HAEIN (SWALL:P44233) (487 aa) fasta scores: E(): 3e-32, 33.6% id in 491 aa, and to Neisseria meningitidis hypothetical protein nma1841 nma1841 or rth35 SWALL:Q9JRG0 (EMBL:AL162757) (475 aa) fasta scores: E(): 1.5e-76, 52.41% id in 477 aa
NP_890157.1	Similar to Neisseria meningitidis hypothetical protein Nma1842 nma1842 SWALL:Q9JTD3 (EMBL:AL162757) (62 aa) fasta scores: E(): 2.4e-05, 47.45% id in 59 aa, and to Neisseria meningitidis hypothetical protein Nmb1103 nmb1103 SWALL:Q9JZD5 (EMBL:AE002460) (65 aa) fasta scores: E(): 0.14, 37.28% id in 59 aa
NP_890158.1	Similar to Neisseria meningitidis hypothetical protein nma1843 nma1843 or rth34 SWALL:Q9JQN9 (EMBL:AL162757) (222 aa) fasta scores: E(): 8.7e-24, 41.42% id in 210 aa, and to Neisseria meningitidis hypothetical protein Nmb1102 nmb1102 SWALL:Q9JZD6 (EMBL:AE002460) (197 aa) fasta scores: E(): 2.2e-15, 39.34% id in 183 aa
NP_890159.1	Similar to Neisseria meningitidis hypothetical protein Nmb1101 nmb1101 SWALL:Q9JZD7 (EMBL:AE002460) (140 aa) fasta scores: E(): 3.3e-17, 44.52% id in 137 aa, and to Bacteriophage Mu protein gp36 36 SWALL:VG36_BPMU (SWALL:Q9T1V9) (141 aa) fasta scores: E(): 0.012, 26.92% id in 130 aa
NP_890160.1	no significant database matches
NP_890161.1	Similar to Salmonella typhi hypothetical protein Sty1620 sty1620 SWALL:Q8Z6U6 (EMBL:AL627270) (317 aa) fasta scores: E(): 1.4e-22, 29.56% id in 318 aa
NP_890162.1	Similar to Salmonella typhi  membrane protein sty1621 SWALL:Q8Z6U5 (EMBL:AL627270) (112 aa) fasta scores: E(): 3.9e-05, 35.29% id in 102 aa
NP_890163.1	Similar to Salmonella typhi hypothetical protein Sty1619 sty1619 SWALL:Q8Z6U7 (EMBL:AL627270) (371 aa) fasta scores: E(): 3.3e-20, 32.97% id in 370 aa
NP_890164.1	Similar to Haemophilus influenzae mu-like prophage flumu g protein 2 hi1568 SWALL:VPG2_HAEIN (SWALL:P45255) (138 aa) fasta scores: E(): 4.5e-06, 39% id in 100 aa, and to Neisseria meningitidis hypothetical protein nma1849 nma1849 or rth29 SWALL:Q9JR88 (EMBL:AL162757) (165 aa) fasta scores: E(): 2.4e-09, 32.63% id in 190 aa
NP_890165.1	Similar to Bacteriophage Mu f protein f or 30 SWALL:VPF_BPMU (SWALL:Q01259) (439 aa) fasta scores: E(): 2.4e-39, 34.06% id in 455 aa, and to Escherichia coli O157:H7 hypothetical protein Ecs4971 ecs4971 SWALL:Q8X313 (EMBL:AP002567) (441 aa) fasta scores: E(): 1.9e-40, 33.7% id in 454 aa
NP_890166.1	Similar to Bacteriophage Mu protein gp29 29 SWALL:VG29_BPMU (SWALL:Q9T1W5) (512 aa) fasta scores: E(): 1.5e-22, 28.6% id in 472 aa, and to Neisseria meningitidis hypothetical protein Nma1851 nma1851 SWALL:Q9JTD2 (EMBL:AL162757) (519 aa) fasta scores: E(): 2.5e-24, 27.33% id in 472 aa
NP_890167.1	Similar to Bacteriophage Mu protein gp28 28 SWALL:VG28_BPMU (SWALL:Q9T1W6) (551 aa) fasta scores: E(): 1.6e-66, 40.15% id in 533 aa, and to Escherichia coli O157:H7  portal protein ecs4969 SWALL:Q8X315 (EMBL:AP002567) (554 aa) fasta scores: E(): 2.2e-66, 38.3% id in 530 aa
NP_890168.1	Similar to Haemophilus influenzae mu-like prophage flumu protein gp27 hi1499 SWALL:VG27_HAEIN (SWALL:P44223) (189 aa) fasta scores: E(): 0.00053, 27.95% id in 186 aa, and to Bacteriophage Mu protein gp27 27 SWALL:VG27_BPMU (SWALL:Q9T1W7) (191 aa) fasta scores: E(): 0.0043, 26.34% id in 186 aa
NP_890169.1	Similar to Bacteriophage Mu hypothetical protein gp26 26 SWALL:VG26_BPMU (SWALL:Q9T1W8) (96 aa) fasta scores: E(): 8.5e-13, 51.11% id in 90 aa, and to Escherichia coli O157:H7 hypothetical protein Ecs4967 ecs4967 SWALL:Q8X317 (EMBL:AP002567) (96 aa) fasta scores: E(): 4.1e-12, 48.93% id in 94 aa
NP_890170.1	no significant database matches
NP_890171.1	no significant database matches
NP_890172.1	no significant database matches
NP_890173.1	Similar to Escherichia coli soluble lytic murein transglycosylase precursor slt or slty or b4392 SWALL:SLT_ECOLI (SWALL:P03810) (645 aa) fasta scores: E(): 0.00016, 28.49% id in 179 aa, and to Salmonella typhimurium  soluble lytic murein transglycosylase stm4217 SWALL:Q8ZKI8 (EMBL:AE008897) (201 aa) fasta scores: E(): 4.2e-47, 60.93% id in 192 aa
NP_890174.1	Similar to Salmonella typhi hypothetical protein Sty1608 SWALL:Q8Z6V8 (EMBL:AL627270) (116 aa) fasta scores: E(): 8.5e-16, 54.63% id in 108 aa, and to Salmonella typhimurium  inner membrane protein stm4218 SWALL:Q8ZKI7 (EMBL:AE008897) (95 aa) fasta scores: E(): 1.3e-09, 47.27% id in 110 aa
NP_890175.1	no significant database matches
NP_890176.1	Similar to Escherichia coli O157:H7 hypothetical 24.2 kDa protein z2968 or ecs2619 SWALL:Q8XBI0 (EMBL:AE005412) (216 aa) fasta scores: E(): 2.9e-10, 34.22% id in 149 aa
NP_890177.1	Similar to Xanthomonas campestris phage-related protein z2969 or xcc2997 SWALL:AAM42269 (EMBL:AE012413) (142 aa) fasta scores: E(): 8.4e-07, 41.12% id in 124 aa
NP_890178.1	Similar to Neisseria meningitidis hypothetical protein Nmb1004 nmb1004 SWALL:Q9JZL2 (EMBL:AE002451) (81 aa) fasta scores: E(): 0.65, 33.33% id in 60 aa
NP_890179.1	no significant database matches
NP_890180.1	Similar to Neisseria meningitidis hypothetical protein Nmb1003 nmb1003 SWALL:Q9JZL3 (EMBL:AE002451) (98 aa) fasta scores: E(): 2.3e-10, 40.42% id in 94 aa
NP_890181.1	Similar to Neisseria meningitidis hypothetical protein Nmb1002 nmb1002 SWALL:Q9JZL4 (EMBL:AE002451) (291 aa) fasta scores: E(): 1.2e-22, 34.92% id in 272 aa, and to Salmonella typhi hypothetical protein Sty1606 sty1606 SWALL:Q8Z6W0 (EMBL:AL627270) (143 aa) fasta scores: E(): 1.2e-17, 53.9% id in 141 aa
NP_890182.1	Similar to Salmonella typhi hypothetical protein Sty1604 sty1604 SWALL:Q8Z6W2 (EMBL:AL627270) (589 aa) fasta scores: E(): 2.3e-114, 51.36% id in 586 aa, and to Vibrio cholerae hypothetical protein Vc1799 vc1799 SWALL:Q9KR47 (EMBL:AE004256) (585 aa) fasta scores: E(): 5.4e-48, 34.57% id in 564 aa
NP_890183.1	Similar to Salmonella typhi Eha SWALL:O87649 (EMBL:AF091717) (322 aa) fasta scores: E(): 2.1e-41, 56.19% id in 226 aa, and to Vibrio cholerae Eha protein vc1798 SWALL:Q9KR48 (EMBL:AE004256) (383 aa) fasta scores: E(): 9.1e-23, 34.66% id in 375 aa
NP_890184.1	no significant database matches
NP_890185.1	no significant database matches
NP_890186.1	Similar to Neisseria meningitidis hypothetical protein Nma1874 nma1874 SWALL:Q9JTC5 (EMBL:AL162757) (125 aa) fasta scores: E(): 1.6e-07, 34.48% id in 116 aa
NP_890187.1	Similar to Neisseria meningitidis hypothetical protein nma1871 nma1871 or rth11 SWALL:Q9JRE4 (EMBL:AL162757) (203 aa) fasta scores: E(): 5.4e-33, 52.55% id in 196 aa
NP_890188.1	Similar to Streptococcus thermophilus DNA-binding protein Hu Hup or HstH SWALL:DBH_STRTR (SWALL:P96045) (91 aa) fasta scores: E(): 6.4e-11, 48.27% id in 87 aa, and to Lactococcus lactis HllA hllA SWALL:AAK08222 (EMBL:AF320916) (91 aa) fasta scores: E(): 3.7e-12, 48.27% id in 87 aa
NP_890189.1	Similar to Pseudomonas phage phiKZ phikz184 SWALL:Q8SCX8 (EMBL:AF399011) (230 aa) fasta scores: E(): 0.0036, 33.04% id in 115 aa
NP_890190.1	Similar to Caenorhabditis elegans K11e8.1B protein k11e8.1B SWALL:O62304 (EMBL:Z70279) (137 aa) fasta scores: E(): 7.2, 27.67% id in 112 aa
NP_890191.1	Similar to Bacteriophage Mu protein gp16 16 or e16 or gemA SWALL:VG16_BPMU (SWALL:Q38494) (183 aa) fasta scores: E(): 4.7e-11, 32.96% id in 179 aa, and to Salmonella typhi hypothetical protein Sty1592 sty1592 SWALL:Q8Z6X2 (EMBL:AL627270) (150 aa) fasta scores: E(): 3.8e-20, 51.14% id in 131 aa
NP_890192.1	Similar to Salmonella typhi  bacteriophage transcriptional regulator sty1591 SWALL:Q8Z6X3 (EMBL:AL627270) (129 aa) fasta scores: E(): 6.7e-07, 32.4% id in 108 aa, and to Erwinia carotovora DNA-binding protein RdgB rdgB SWALL:RDGB_ERWCA (SWALL:Q47588) (117 aa) fasta scores: E(): 0.033, 25.49% id in 102 aa
NP_890193.1	ortholog of Bordetella pertussis (BX470248) BP1138
NP_890194.1	ortholog of Bordetella pertussis (BX470248) BP1137
NP_890195.1	ortholog of Bordetella pertussis (BX470248) BP1136
NP_890196.1	ortholog of Bordetella pertussis (BX470248) BP1135
NP_890197.1	ortholog of Bordetella pertussis (BX470248) BP1132
NP_890198.1	ortholog of Bordetella pertussis (BX470248) BP1131
NP_890199.1	ortholog of Bordetella pertussis (BX470248) BP1129
NP_890200.1	ortholog of Bordetella pertussis (BX470248) BP1128
NP_890201.1	ortholog of Bordetella pertussis (BX470248) BP1127
NP_890202.1	E3 component of 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide
NP_890203.1	component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA
NP_890204.1	SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide
NP_890205.1	ortholog of Bordetella pertussis (BX470248) BP1123
NP_890206.1	ortholog of Bordetella pertussis (BX470248) BP1122
NP_890207.1	paralogs to the E1 component of pyruvate dehydrogenase subunit E1
NP_890208.1	NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate
NP_890209.1	ortholog of Bordetella pertussis (BX470248) BP1119
NP_890211.1	ortholog of Bordetella pertussis (BX470248) BP2356
NP_890212.1	type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH
NP_890213.1	ortholog of Bordetella pertussis (BX470248) BP2359
NP_890214.1	part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase
NP_890215.1	part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol
NP_890216.1	ortholog of Bordetella pertussis (BX470248) BP2362
NP_890217.1	ortholog of Bordetella pertussis (BX470248) BP2363
NP_890218.1	ortholog of Bordetella pertussis (BX470248) BP2364
NP_890219.1	catalyzes the oxidation of malate to oxaloacetate
NP_890220.1	catalyzes the formation of pyruvate and succinate from 2-methylisocitrate
NP_890221.1	catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate; also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity
NP_890222.2	Catalyzes the conversion of citrate to isocitrate
NP_890223.1	ortholog of Bordetella pertussis (BX470248) BP2370
NP_890224.1	functions in propionate metabolism; involved in isomerization of (2S,3S)-methylcitrate to (2R,3S)-methylisocitrate; also encodes minor aconitase or dehydratase activity; aconitase C
NP_890225.1	ortholog of Bordetella pertussis (BX470248) BP2372
NP_890226.1	ortholog of Bordetella pertussis (BX470248) BP2373
NP_890227.1	ortholog of Bordetella pertussis (BX470248) BP2374
NP_890228.1	ortholog of Bordetella pertussis (BX470248) BP2375
NP_890229.1	ortholog of Bordetella pertussis (BX470248) BP2376
NP_890230.1	ortholog of Bordetella pertussis (BX470248) BP2377
NP_890231.1	ortholog of Bordetella pertussis (BX470248) BP2378
NP_890232.1	ortholog of Bordetella pertussis (BX470248) BP2379
NP_890233.1	ortholog of Bordetella pertussis (BX470248) BP2380
NP_890234.1	ortholog of Bordetella pertussis (BX470248) BP2382
NP_890235.1	ortholog of Bordetella pertussis (BX470248) BP2383
NP_890236.1	ortholog of Bordetella pertussis (BX470248) BP2384
NP_890237.1	forms a complex with FtsL and FtsQ; colocalizes to the septal region of the dividing cell; membrane protein
NP_890238.1	enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis
NP_890239.1	ortholog of Bordetella pertussis (BX470248) BP2387
NP_890240.1	catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis
NP_890241.1	CTP synthase; CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer
NP_890242.1	ortholog of Bordetella pertussis (BX470248) BP2391
NP_890243.1	ortholog of Bordetella pertussis (BX470248) BP2392
NP_890244.1	ortholog of Bordetella pertussis (BX470248) BP2393; Similar to Ochrobactrum anthropi D-aminopeptidase dmpA SWALL:Q59632 (EMBL:X97669) (375 aa) fasta scores: E(): 1.9e-33, 37.7% id in 358 aa, and to Ralstonia solanacearum probable D-aminopeptidase rsc1383 or rs04666 SWALL:Q8XZL2 (EMBL:AL646064) (341 aa) fasta scores: E(): 6.4e-84, 69.43% id in 337 aa
NP_890245.1	ortholog of Bordetella pertussis (BX470248) BP2394
NP_890246.1	ortholog of Bordetella pertussis (BX470248) BP2395
NP_890247.1	ortholog of Bordetella pertussis (BX470248) BP2396
NP_890248.1	ortholog of Bordetella pertussis (BX470248) BP2397
NP_890249.1	ortholog of Bordetella pertussis (BX470248) BP2398
NP_890250.1	ortholog of Bordetella pertussis (BX470248) BP2399
NP_890251.1	ortholog of Bordetella pertussis (BX470248) BP2400
NP_890252.1	ortholog of Bordetella pertussis (BX470248) BP2401
NP_890253.1	ortholog of Bordetella pertussis (BX470248) BP2402
NP_890254.1	ortholog of Bordetella pertussis (BX470248) BP2403
NP_890255.1	ortholog of Bordetella pertussis (BX470248) BP2404
NP_890256.1	ortholog of Bordetella pertussis (BX470248) BP2405
NP_890257.1	ortholog of Bordetella pertussis (BX470248) BP2406
NP_890258.1	ortholog of Bordetella pertussis (BX470248) BP2407
NP_890259.1	ortholog of Bordetella pertussis (BX470248) BP2408
NP_890260.2	Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA
NP_890261.1	ortholog of Bordetella pertussis (BX470248) BP2410
NP_890262.1	ortholog of Bordetella pertussis (BX470248) BP2411
NP_890263.1	catalyzes the formation of propionyl-CoA using propionate as a substrate; PrpE from Ralstonia solanacearum can produce acetyl-, propionyl-, butyryl- and acrylyl-coenzyme A, and Salmonella enterica produces propionyl- and butyryl-coenzyme A; not expressed in Escherichia coli when grown on propionate/minimal media; ATP-dependent
NP_890264.1	ortholog of Bordetella pertussis (BX470248) BP2413
NP_890265.1	ortholog of Bordetella pertussis (BX470248) BP2414
NP_890266.1	ortholog of Bordetella pertussis (BX470248) BP2416
NP_890267.1	ortholog of Bordetella pertussis (BX470248) BP2417
NP_890268.1	ortholog of Bordetella pertussis (BX470248) BP2418
NP_890269.1	ortholog of Bordetella pertussis (BX470248) BP2419
NP_890270.1	ortholog of Bordetella pertussis (BX470248) BP2420
NP_890271.1	catalyzes the removal of N-terminal amino acids preferably leucine from various peptides
NP_890272.1	ortholog of Bordetella pertussis (BX470248) BP2422
NP_890273.1	ortholog of Bordetella pertussis (BX470248) BP2423
NP_890274.1	ortholog of Bordetella pertussis (BX470248) BP2424
NP_890275.1	ortholog of Bordetella pertussis (BX470248) BP2425
NP_890276.1	ortholog of Bordetella pertussis (BX470248) BP2426
NP_890277.1	ortholog of Bordetella pertussis (BX470248) BP2427
NP_890278.1	ortholog of Bordetella pertussis (BX470248) BP2428
NP_890279.1	ortholog of Bordetella pertussis (BX470248) BP2429
NP_890280.1	Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome
NP_890281.1	cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity
NP_890282.1	ortholog of Bordetella pertussis (BX470248) BP2432
NP_890283.1	binds to the ribosome on the universally-conserved alpha-sarcin loop
NP_890284.1	ortholog of Bordetella pertussis (BX470248) BP2434
NP_890285.1	ortholog of Bordetella pertussis (BX470248) BP2435
NP_890286.1	ortholog of Bordetella pertussis (BX470248) BP2436
NP_890287.1	Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response
NP_890288.1	ortholog of Bordetella pertussis (BX470248) BP2438
NP_890289.1	FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP
NP_890290.1	carries the fatty acid chain in fatty acid biosynthesis
NP_890291.1	Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
NP_890292.1	ortholog of Bordetella pertussis (BX470248) BP2442
NP_890293.1	FabH; beta-ketoacyl-ACP synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-ACP synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs
NP_890294.1	involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY
NP_890295.1	some L32 proteins have zinc finger motifs consisting of CXXC while others do not
NP_890296.1	ortholog of Bordetella pertussis (BX470248) BP2446
NP_890297.1	Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell
NP_890298.1	ortholog of Bordetella pertussis (BX470248) BP2448
NP_890299.1	ortholog of Bordetella pertussis (BX470248) BP2449
NP_890300.1	in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY; sulfite oxidase activity not demonstrated; contains heme
NP_890301.1	in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ
NP_890302.1	ortholog of Bordetella pertussis (BX470248) BP0478
NP_890303.1	ortholog of Bordetella pertussis (BX470248) BP0477
NP_890304.1	ortholog of Bordetella pertussis (BX470248) BP0475
NP_890305.1	ortholog of Bordetella pertussis (BX470248) BP0474
NP_890306.1	ortholog of Bordetella pertussis (BX470248) BP3592
NP_890307.1	catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits
NP_890308.1	catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis
NP_890309.1	catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate
NP_890310.1	catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine
NP_890311.1	ortholog of Bordetella pertussis (BX470248) BP3587
NP_890312.1	ortholog of Bordetella pertussis (BX470248) BP3586
NP_890313.1	ortholog of Bordetella pertussis (BX470248) BP3585
NP_890314.1	ortholog of Bordetella pertussis (BX470248) BP3584
NP_890315.1	catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate
NP_890316.1	ortholog of Bordetella pertussis (BX470248) BP3582
NP_890317.1	ortholog of Bordetella pertussis (BX470248) BP3581
NP_890318.1	ortholog of Bordetella pertussis (BX470248) BP3580
NP_890319.1	Involved in the electron transport chain
NP_890320.1	ortholog of Bordetella pertussis (BX470248) BP3578
NP_890321.1	ortholog of Bordetella pertussis (BX470248) BP3577
NP_890322.1	ortholog of Bordetella pertussis (BX470248) BP3576
NP_890323.1	ortholog of Bordetella pertussis (BX470248) BP3575
NP_890324.1	ortholog of Bordetella pertussis (BX470248) BP3574
NP_890325.1	ortholog of Bordetella pertussis (BX470248) BP3573
NP_890326.1	ortholog of Bordetella pertussis (BX470248) BP3572
NP_890327.1	catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids
NP_890329.1	ortholog of Bordetella pertussis (BX470248) BP3570
NP_890330.1	ortholog of Bordetella pertussis (BX470248) BP3569
NP_890331.1	ortholog of Bordetella pertussis (BX470248) BP3568
NP_890332.1	ortholog of Bordetella pertussis (BX470248) BP3567
NP_890333.1	ortholog of Bordetella pertussis (BX470248) BP3566
NP_890334.1	ortholog of Bordetella pertussis (BX470248) BP3565
NP_890335.1	this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress
NP_890336.1	ortholog of Bordetella pertussis (BX470248) BP3563
NP_890337.1	ortholog of Bordetella pertussis (BX470248) BP3562
NP_890338.1	ortholog of Bordetella pertussis (BX470248) BP3561
NP_890339.1	ortholog of Bordetella pertussis (BX470248) BP3560
NP_890340.1	ortholog of Bordetella pertussis (BX470248) BP3559
NP_890341.1	ortholog of Bordetella pertussis (BX470248) BP3558
NP_890342.1	ortholog of Bordetella pertussis (BX470248) BP3557
NP_890343.1	ortholog of Bordetella pertussis (BX470248) BP3556
NP_890344.1	ortholog of Bordetella pertussis (BX470248) BP3555
NP_890345.1	part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of ompF; also functions in regulation of other genes; forms dimers upon phosphorylation
NP_890346.1	ortholog of Bordetella pertussis (BX470248) BP3553
NP_890347.1	ortholog of Bordetella pertussis (BX470248) BP3552
NP_890348.1	ortholog of Bordetella pertussis (BX470248) BP3551
NP_890349.1	ortholog of Bordetella pertussis (BX470248) BP3550
NP_890350.1	ortholog of Bordetella pertussis (BX470248) BP3549
NP_890351.1	catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate
NP_890352.1	4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers
NP_890353.1	ortholog of Bordetella pertussis (BX470248) BP0864
NP_890354.1	ortholog of Bordetella pertussis (BX470248) BP0863
NP_890355.1	ortholog of Bordetella pertussis (BX470248) BP0862
NP_890356.1	ortholog of Bordetella pertussis (BX470248) BP0861
NP_890357.1	catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; catalytic
NP_890358.1	catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
NP_890359.1	ortholog of Bordetella pertussis (BX470248) BP0858
NP_890360.1	ortholog of Bordetella pertussis (BX470248) BP0857
NP_890361.1	ortholog of Bordetella pertussis (BX470248) BP0856
NP_890362.1	ortholog of Bordetella pertussis (BX470248) BP0855
NP_890363.1	Catalyzes the transfer of electrons from NADH to quinone
NP_890364.1	Catalyzes the transfer of electrons from NADH to quinone
NP_890365.1	ortholog of Bordetella pertussis (BX470248) BP0852
NP_890366.1	Catalyzes the transfer of electrons from NADH to quinone
NP_890367.1	ortholog of Bordetella pertussis (BX470248) BP0850
NP_890368.1	Catalyzes the transfer of electrons from NADH to quinone
NP_890369.1	Catalyzes the transfer of electrons from NADH to quinone
NP_890370.1	Catalyzes the transfer of electrons from NADH to ubiquinone
NP_890371.1	ortholog of Bordetella pertussis (BX470248) BP0846
NP_890372.1	Catalyzes the transfer of electrons from NADH to quinone
NP_890373.1	Catalyzes the transfer of electrons from NADH to quinone
NP_890374.2	Catalyzes the transfer of electrons from NADH to quinone
NP_890375.1	The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen
NP_890376.1	ortholog of Bordetella pertussis (BX470248) BP0841
NP_890377.1	ortholog of Bordetella pertussis (BX470248) BP0840
NP_890378.1	ortholog of Bordetella pertussis (BX470248) BP0838
NP_890379.1	ortholog of Bordetella pertussis (BX470248) BP0837
NP_890380.1	ortholog of Bordetella pertussis (BX470248) BP0836
NP_890381.1	ortholog of Bordetella pertussis (BX470248) BP0835
NP_890382.1	ortholog of Bordetella pertussis (BX470248) BP0834
NP_890383.1	ortholog of Bordetella pertussis (BX470248) BP0833
NP_890384.1	ortholog of Bordetella pertussis (BX470248) BP0832
NP_890385.1	ortholog of Bordetella pertussis (BX470248) BP0831
NP_890386.1	ortholog of Bordetella pertussis (BX470248) BP0829
NP_890387.1	ortholog of Bordetella pertussis (BX470248) BP0828
NP_890388.1	ortholog of Bordetella pertussis (BX470248) BP0827
NP_890389.1	ortholog of Bordetella pertussis (BX470248) BP0826
NP_890390.1	ortholog of Bordetella pertussis (BX470248) BP0825
NP_890391.1	ortholog of Bordetella pertussis (BX470248) BP0824
NP_890392.1	ortholog of Bordetella pertussis (BX470248) BP0823
NP_890393.1	ortholog of Bordetella pertussis (BX470248) BP0822
NP_890394.1	ortholog of Bordetella pertussis (BX470248) BP0821
NP_890395.1	ortholog of Bordetella pertussis (BX470248) BP0820
NP_890396.1	ortholog of Bordetella pertussis (BX470248) BP0819
NP_890397.1	ortholog of Bordetella pertussis (BX470248) BP0818; Similar to Pseudomonas aeruginosa probable thiosulfate sulfurtransferase pa2603 SWALL:Q9I0N4 (EMBL:AE004689) (527 aa) fasta scores: E(): 3.2e-45, 40.31% id in 516 aa, and to Agrobacterium tumefaciens hypothetical protein atu6089 or agr_pti_bx104 SWALL:Q8U646 (EMBL:AE009427) (395 aa) fasta scores: E(): 1.4e-30, 41.66% id in 312 aa
NP_890398.1	ortholog of Bordetella pertussis (BX470248) BP0817
NP_890399.1	ortholog of Bordetella pertussis (BX470248) BP0816
NP_890400.1	ortholog of Bordetella pertussis (BX470248) BP0815
NP_890401.1	ortholog of Bordetella pertussis (BX470248) BP0814
NP_890402.1	ortholog of Bordetella pertussis (BX470248) BP0813
NP_890403.1	ortholog of Bordetella pertussis (BX470248) BP0810
NP_890404.1	ortholog of Bordetella pertussis (BX470248) BP0809
NP_890405.1	ortholog of Bordetella pertussis (BX470248) BP0808
NP_890406.1	ortholog of Bordetella pertussis (BX470248) BP0807
NP_890407.1	ortholog of Bordetella pertussis (BX470248) BP0806
NP_890408.1	ortholog of Bordetella pertussis (BX470248) BP0805
NP_890409.1	ortholog of Bordetella pertussis (BX470248) BP0804
NP_890410.1	ortholog of Bordetella pertussis (BX470248) BP0802
NP_890411.1	Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate
NP_890412.1	ortholog of Bordetella pertussis (BX470248) BP0800
NP_890413.1	ortholog of Bordetella pertussis (BX470248) BP0799
NP_890414.1	catalyzes the formation of 2-oxobutanoate from L-threonine
NP_890415.1	ortholog of Bordetella pertussis (BX470248) BP0796
NP_890416.1	ortholog of Bordetella pertussis (BX470248) BP0795
NP_890417.1	primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence
NP_890418.1	ortholog of Bordetella pertussis (BX470248) BP0793
NP_890419.1	ortholog of Bordetella pertussis (BX470248) BP0792
NP_890420.1	catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis
NP_890421.1	with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit
NP_890422.1	ortholog of Bordetella pertussis (BX470248) BP0789
NP_890423.1	ortholog of Bordetella pertussis (BX470248) BP0787+BP2450
NP_890424.1	ortholog of Bordetella pertussis (BX470248) BP2451
NP_890425.1	ortholog of Bordetella pertussis (BX470248) BP2452
NP_890426.1	ortholog of Bordetella pertussis (BX470248) BP2454
NP_890427.1	ortholog of Bordetella pertussis (BX470248) BP2455
NP_890428.1	ortholog of Bordetella pertussis (BX470248) BP2456
NP_890429.1	ortholog of Bordetella pertussis (BX470248) BP2457
NP_890430.1	ortholog of Bordetella pertussis (BX470248) BP2458
NP_890431.1	ortholog of Bordetella pertussis (BX470248) BP2459
NP_890432.1	ortholog of Bordetella pertussis (BX470248) BP2460
NP_890433.1	ortholog of Bordetella pertussis (BX470248) BP2461
NP_890434.1	ortholog of Bordetella pertussis (BX470248) BP2462
NP_890435.1	ortholog of Bordetella pertussis (BX470248) BP2463
NP_890436.1	ortholog of Bordetella pertussis (BX470248) BP2464
NP_890437.1	ortholog of Bordetella pertussis (BX470248) BP2465
NP_890438.1	ortholog of Bordetella pertussis (BX470248) BP2466
NP_890439.1	ortholog of Bordetella pertussis (BX470248) BP2467
NP_890440.1	ortholog of Bordetella pertussis (BX470248) BP2468
NP_890441.1	ortholog of Bordetella pertussis (BX470248) BP2469
NP_890442.1	catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
NP_890443.1	ortholog of Bordetella pertussis (BX470248) BP2471
NP_890444.1	participates with LolB in the incorporation of lipoprotein into the outer membrane
NP_890445.1	ortholog of Bordetella pertussis (BX470248) BP2473
NP_890446.1	ortholog of Bordetella pertussis (BX470248) BP2474
NP_890447.1	ortholog of Bordetella pertussis (BX470248) BP2475
NP_890448.1	ortholog of Bordetella pertussis (BX470248) BP2476
NP_890449.1	ortholog of Bordetella pertussis (BX470248) BP2478
NP_890450.1	ortholog of Bordetella pertussis (BX470248) BP2479
NP_890451.1	catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions
NP_890452.1	ortholog of Bordetella pertussis (BX470248) BP2481
NP_890453.1	One of the components of the high-affinity ATP-driven potassium transport (or KDP)system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex
NP_890454.1	ortholog of Bordetella pertussis (BX470248) BP2483
NP_890455.1	ortholog of Bordetella pertussis (BX470248) BP2484
NP_890456.1	ortholog of Bordetella pertussis (BX470248) BP2486
NP_890457.1	ortholog of Bordetella pertussis (BX470248) BP2487
NP_890458.1	Converts isocitrate to alpha ketoglutarate
NP_890459.1	ortholog of Bordetella pertussis (BX470248) BP2489
NP_890460.1	ortholog of Bordetella pertussis (BX470248) BP2490
NP_890461.1	ortholog of Bordetella pertussis (BX470248) BP2491
NP_890462.1	ortholog of Bordetella pertussis (BX470248) BP2493
NP_890463.1	ortholog of Bordetella pertussis (BX470248) BP2494
NP_890464.1	ortholog of Bordetella pertussis (BX470248) BP2495
NP_890465.1	ortholog of Bordetella pertussis (BX470248) BP2496
NP_890466.1	ortholog of Bordetella pertussis (BX470248) BP2497
NP_890467.1	chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion
NP_890468.1	heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria
NP_890469.1	ortholog of Bordetella pertussis (BX470248) BP2500
NP_890470.1	with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor
NP_890471.1	ortholog of Bordetella pertussis (BX470248) BP2502
NP_890472.1	protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic
NP_890473.1	Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
NP_890474.1	catalyzes the phosphorylation of NAD to NADP
NP_890475.1	ortholog of Bordetella pertussis (BX470248) BP2506
NP_890476.1	ortholog of Bordetella pertussis (BX470248) BP2507
NP_890477.1	ortholog of Bordetella pertussis (BX470248) BP2508
NP_890478.1	catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis
NP_890479.1	catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis
NP_890483.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
NP_890495.1	ortholog of Bordetella pertussis (BX470248) BP3110
NP_890496.1	ortholog of Bordetella pertussis (BX470248) BP3109
NP_890497.1	ortholog of Bordetella pertussis (BX470248) BP3108
NP_890498.1	ortholog of Bordetella pertussis (BX470248) BP3107
NP_890499.1	ortholog of Bordetella pertussis (BX470248) BP3106
NP_890500.1	ortholog of Bordetella pertussis (BX470248) BP3105
NP_890501.1	ortholog of Bordetella pertussis (BX470248) BP3104+BP3450
NP_890502.1	ortholog of Bordetella pertussis (BX470248) BP3449
NP_890503.1	ortholog of Bordetella pertussis (BX470248) BP3448
NP_890504.1	ortholog of Bordetella pertussis (BX470248) BP3447
NP_890505.1	ortholog of Bordetella pertussis (BX470248) BP3446
NP_890506.1	ortholog of Bordetella pertussis (BX470248) BP3445
NP_890507.1	leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys
NP_890508.1	Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate
NP_890509.1	catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors
NP_890510.1	ortholog of Bordetella pertussis (BX470248) BP3441
NP_890511.1	ortholog of Bordetella pertussis (BX470248) BP3440
NP_890512.1	ortholog of Bordetella pertussis (BX470248) BP3439
NP_890513.1	ortholog of Bordetella pertussis (BX470248) BP3438
NP_890514.1	ortholog of Bordetella pertussis (BX470248) BP3437
NP_890515.1	ortholog of Bordetella pertussis (BX470248) BP3393
NP_890516.1	ortholog of Bordetella pertussis (BX470248) BP3394
NP_890517.1	ortholog of Bordetella pertussis (BX470248) BP3395
NP_890518.1	ortholog of Bordetella pertussis (BX470248) BP3396
NP_890519.1	ortholog of Bordetella pertussis (BX470248) BP3397
NP_890520.1	catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids
NP_890521.1	ortholog of Bordetella pertussis (BX470248) BP3399
NP_890522.1	ortholog of Bordetella pertussis (BX470248) BP3400
NP_890523.1	ortholog of Bordetella pertussis (BX470248) BP3401
NP_890524.1	ortholog of Bordetella pertussis (BX470248) BP3402
NP_890525.1	ortholog of Bordetella pertussis (BX470248) BP3403
NP_890526.1	ortholog of Bordetella pertussis (BX470248) BP3404
NP_890527.1	ortholog of Bordetella pertussis (BX470248) BP3405
NP_890528.1	ortholog of Bordetella pertussis (BX470248) BP3409
NP_890529.1	ortholog of Bordetella pertussis (BX470248) BP3410
NP_890530.1	ortholog of Bordetella pertussis (BX470248) BP3411
NP_890531.1	ortholog of Bordetella pertussis (BX470248) BP3412
NP_890532.1	ortholog of Bordetella pertussis (BX470248) BP3413
NP_890533.1	ortholog of Bordetella pertussis (BX470248) BP3414
NP_890534.1	ortholog of Bordetella pertussis (BX470248) BP3415
NP_890535.1	involved in de novo purine biosynthesis
NP_890536.1	endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity
NP_890537.1	plays an essential role in ATP-dependent branch migration of the Holliday junction
NP_890538.1	ortholog of Bordetella pertussis (BX470248) BP3419
NP_890539.1	catalyzes the formation of 2-oxobutanoate from L-threonine or the formation of pyruvate from serine
NP_890540.1	promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration
NP_890541.1	ortholog of Bordetella pertussis (BX470248) BP3422
NP_890542.1	ortholog of Bordetella pertussis (BX470248) BP3221
NP_890543.1	ortholog of Bordetella pertussis (BX470248) BP3222
NP_890544.1	ortholog of Bordetella pertussis (BX470248) BP3223
NP_890545.1	ortholog of Bordetella pertussis (BX470248) BP3224
NP_890546.1	ortholog of Bordetella pertussis (BX470248) BP3225
NP_890547.1	catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
NP_890548.1	blocks the formation of polar Z-ring septums
NP_890549.1	ortholog of Bordetella pertussis (BX470248) BP3228
NP_890550.1	works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell
NP_890551.1	ortholog of Bordetella pertussis (BX470248) BP3231
NP_890552.1	ortholog of Bordetella pertussis (BX470248) BP3232
NP_890553.1	ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence
NP_890554.1	ortholog of Bordetella pertussis (BX470248) BP3234
NP_890555.1	ortholog of Bordetella pertussis (BX470248) BP3235
NP_890556.1	catalyzes the formation of indole-3-acetic acid from indole-3-acetamide
NP_890561.1	ortholog of Bordetella pertussis (BX470248) BP3236
NP_890562.1	ortholog of Bordetella pertussis (BX470248) BP3237
NP_890563.1	ortholog of Bordetella pertussis (BX470248) BP3238
NP_890564.1	ortholog of Bordetella pertussis (BX470248) BP3239
NP_890565.1	ortholog of Bordetella pertussis (BX470248) BP3239A
NP_890566.1	ortholog of Bordetella pertussis (BX470248) BP3240
NP_890567.1	catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine
NP_890568.1	ortholog of Bordetella pertussis (BX470248) BP3242
NP_890569.1	ortholog of Bordetella pertussis (BX470248) BP3244
NP_890570.1	ortholog of Bordetella pertussis (BX470248) BP3245
NP_890571.1	activates fatty acids by binding to coenzyme A
NP_890572.1	ortholog of Bordetella pertussis (BX470248) BP3247
NP_890573.1	ortholog of Bordetella pertussis (BX470248) BP3248
NP_890574.1	ortholog of Bordetella pertussis (BX470248) BP3249
NP_890575.1	ortholog of Bordetella pertussis (BX470248) BP3250
NP_890576.1	ortholog of Bordetella pertussis (BX470248) BP3251
NP_890577.1	ortholog of Bordetella pertussis (BX470248) BP3252
NP_890578.1	ortholog of Bordetella pertussis (BX470248) BP3253
NP_890579.1	produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine
NP_890580.1	ortholog of Bordetella pertussis (BX470248) BP3255
NP_890581.1	ortholog of Bordetella pertussis (BX470248) BP3256+BP0255
NP_890582.1	ortholog of Bordetella pertussis (BX470248) BP0254
NP_890583.1	ortholog of Bordetella pertussis (BX470248) BP0253
NP_890584.1	ortholog of Bordetella pertussis (BX470248) BP0252
NP_890585.1	ortholog of Bordetella pertussis (BX470248) BP0251
NP_890586.1	ortholog of Bordetella pertussis (BX470248) BP0250
NP_890587.1	ortholog of Bordetella pertussis (BX470248) BP0249
NP_890588.1	class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle
NP_890589.1	ortholog of Bordetella pertussis (BX470248) BP0247
NP_890590.1	ortholog of Bordetella pertussis (BX470248) BP0246
NP_890591.1	ortholog of Bordetella pertussis (BX470248) BP0245
NP_890592.1	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
NP_890593.1	IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity
NP_890594.1	catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis
NP_890595.1	ortholog of Bordetella pertussis (BX470248) BP0241
NP_890596.1	ortholog of Bordetella pertussis (BX470248) BP0240
NP_890597.1	ortholog of Bordetella pertussis (BX470248) BP0239
NP_890598.1	ortholog of Bordetella pertussis (BX470248) BP0238
NP_890599.1	ortholog of Bordetella pertussis (BX470248) BP0237
NP_890600.1	ortholog of Bordetella pertussis (BX470248) BP0236
NP_890601.1	ortholog of Bordetella pertussis (BX470248) BP0235
NP_890602.1	ortholog of Bordetella pertussis (BX470248) BP0234
NP_890603.1	ortholog of Bordetella pertussis (BX470248) BP0233
NP_890604.1	ortholog of Bordetella pertussis (BX470248) BP0232
NP_890605.1	ortholog of Bordetella pertussis (BX470248) BP0231
NP_890606.1	ortholog of Bordetella pertussis (BX470248) BP0230
NP_890607.1	ortholog of Bordetella pertussis (BX470248) BP0229
NP_890616.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
NP_890619.1	catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis
NP_890622.1	ortholog of Bordetella pertussis (BX470248) BP0032
NP_890623.1	glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA
NP_890624.1	ortholog of Bordetella pertussis (BX470248) BP0034
NP_890625.1	Converts the D-glycero-beta-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate
NP_890626.1	ortholog of Bordetella pertussis (BX470248) BP0036
NP_890627.1	ortholog of Bordetella pertussis (BX470248) BP0037
NP_890628.1	ortholog of Bordetella pertussis (BX470248) BP0038
NP_890629.1	cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+)
NP_890630.2	functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA
NP_890631.1	ortholog of Bordetella pertussis (BX470248) BP3334
NP_890632.1	catalyzes the formation of phosphoenolpyruvate from pyruvate
NP_890633.1	ortholog of Bordetella pertussis (BX470248) BP3332
NP_890634.1	catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin
NP_890635.1	ortholog of Bordetella pertussis (BX470248) BP3330
NP_890636.1	ortholog of Bordetella pertussis (BX470248) BP3329
NP_890637.1	ortholog of Bordetella pertussis (BX470248) BP3328
NP_890638.1	ortholog of Bordetella pertussis (BX470248) BP3327
NP_890639.1	ortholog of Bordetella pertussis (BX470248) BP3326
NP_890640.1	4-alpha-hydroxytetrahydrobiopterin dehydratase activity; catalyzes the formation of (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7, 8-dihydro-6H-pterin from (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7, 8-tetrahydro-4a-hydroxypterin; functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction
NP_890641.1	ortholog of Bordetella pertussis (BX470248) BP3324
NP_890642.1	ortholog of Bordetella pertussis (BX470248) BP0718
NP_890643.1	ortholog of Bordetella pertussis (BX470248) BP0720
NP_890644.1	ortholog of Bordetella pertussis (BX470248) BP0721
NP_890645.1	catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia
NP_890646.1	ortholog of Bordetella pertussis (BX470248) BP0723
NP_890647.1	ortholog of Bordetella pertussis (BX470248) BP0724
NP_890648.1	ortholog of Bordetella pertussis (BX470248) BP0725
NP_890649.1	ortholog of Bordetella pertussis (BX470248) BP0726
NP_890650.1	ortholog of Bordetella pertussis (BX470248) BP0727
NP_890651.1	ortholog of Bordetella pertussis (BX470248) BP0728
NP_890652.1	ortholog of Bordetella pertussis (BX470248) BP0731
NP_890653.1	ortholog of Bordetella pertussis (BX470248) BP0732
NP_890654.1	Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; in Pseudomonas aeruginosa this extracytoplasmic function sigma factor may be involved in the transcription of the ferric pyoverdine receptor gene, fpvA.
NP_890655.1	ortholog of Bordetella pertussis (BX470248) BP0737
NP_890656.1	ortholog of Bordetella pertussis (BX470248) BP0736
NP_890657.1	ortholog of Bordetella pertussis (BX470248) BP0735
NP_890665.1	similar to the 3-(2,3-dihydroxyphenyl)propionate dioxygenase from E. coli
NP_890668.1	ortholog of Bordetella pertussis (BX470248) BP2847
NP_890669.1	ortholog of Bordetella pertussis (BX470248) BP2846
NP_890670.1	ortholog of Bordetella pertussis (BX470248) BP2843
NP_890671.1	ortholog of Bordetella pertussis (BX470248) BP2842; Weakly similar to Lactococcus lactis hypothetical 9.2 kDa protein SWALL:Q9JRK4 (EMBL:AF178424) (77 aa) fasta scores: E(): 4, 27.11% id in 59 aa
NP_890672.1	Similar to Xylella fastidiosa phage-related integrase xf0631 SWALL:Q9PFM6 (EMBL:AE003908) (413 aa) fasta scores: E(): 2e-54, 42.41% id in 422 aa, and to Xanthomonas axonopodis phage-related integrase int or xac2222 SWALL:AAM37075 (EMBL:AE011860) (399 aa) fasta scores: E(): 5.2e-07, 27.27% id in 396 aa
NP_890673.1	Similar to Salmonella enterica subsp. enterica serovar Typhimurium excisionase xiS SWALL:Q9FDI1 (EMBL:AF261825) (122 aa) fasta scores: E(): 0.56, 36.14% id in 83 aa, and to Rhizobium loti hypothetical protein Msr9739 msr9739 SWALL:Q98NU3 (EMBL:AP003017) (93 aa) fasta scores: E(): 0.00042, 43.54% id in 62 aa
NP_890674.1	Weakly similar to Bacteriophage APSE-1 complete genome SWALL:Q9T1U5 (EMBL:AF157835) (752 aa) fasta scores: E(): 0.0002, 30.76% id in 221 aa, and to Synechococcus RepA protein repA SWALL:Q53576 (EMBL:S89470) (876 aa) fasta scores: E(): 0.007, 25.64% id in 273 aa
NP_890675.1	no significant database matches
NP_890676.1	no significant database matches
NP_890677.1	Similar to Xylella fastidiosa hypothetical protein Xf0635 xf0635 SWALL:Q9PFM2 (EMBL:AE003908) (240 aa) fasta scores: E(): 9.4e-44, 53.41% id in 234 aa
NP_890678.1	Similar to Xylella fastidiosa hypothetical protein Xf0636 xf0636 SWALL:Q9PFM1 (EMBL:AE003908) (155 aa) fasta scores: E(): 2e-16, 40.64% id in 155 aa
NP_890679.1	no significant database matches
NP_890680.1	no significant database matches
NP_890681.1	no significant database matches
NP_890682.1	no significant database matches
NP_890683.1	no significant database matches
NP_890684.1	no significant database matches
NP_890685.1	ortholog of Bordetella pertussis (BX470248) BP2841
NP_890686.1	ortholog of Bordetella pertussis (BX470248) BP2840
NP_890687.1	ortholog of Bordetella pertussis (BX470248) BP2839
NP_890688.1	ortholog of Bordetella pertussis (BX470248) BP2838
NP_890689.1	ortholog of Bordetella pertussis (BX470248) BP2837
NP_890690.1	ortholog of Bordetella pertussis (BX470248) BP2836
NP_890691.1	ortholog of Bordetella pertussis (BX470248) BP2835
NP_890692.1	ortholog of Bordetella pertussis (BX470248) BP2833
NP_890693.1	ortholog of Bordetella pertussis (BX470248) BP2832
NP_890694.1	ortholog of Bordetella pertussis (BX470248) BP2831
NP_890695.1	ortholog of Bordetella pertussis (BX470248) BP2830
NP_890696.1	ortholog of Bordetella pertussis (BX470248) BP2828
NP_890697.1	ortholog of Bordetella pertussis (BX470248) BP2827
NP_890698.1	ortholog of Bordetella pertussis (BX470248) BP2826
NP_890699.1	ortholog of Bordetella pertussis (BX470248) BP2825
NP_890700.1	ortholog of Bordetella pertussis (BX470248) BP2824
NP_890701.1	ortholog of Bordetella pertussis (BX470248) BP2823
NP_890702.1	ortholog of Bordetella pertussis (BX470248) BP2822
NP_890703.1	ortholog of Bordetella pertussis (BX470248) BP2820
NP_890704.1	ortholog of Bordetella pertussis (BX470248) BP2818
NP_890705.1	ortholog of Bordetella pertussis (BX470248) BP2817
NP_890706.1	ortholog of Bordetella pertussis (BX470248) BP2816
NP_890707.1	ortholog of Bordetella pertussis (BX470248) BP2815
NP_890708.1	ortholog of Bordetella pertussis (BX470248) BP2814
NP_890709.1	ortholog of Bordetella pertussis (BX470248) BP2813
NP_890710.1	ortholog of Bordetella pertussis (BX470248) BP2811
NP_890711.1	ortholog of Bordetella pertussis (BX470248) BP2810
NP_890712.1	ortholog of Bordetella pertussis (BX470248) BP2809
NP_890713.1	ortholog of Bordetella pertussis (BX470248) BP2808
NP_890714.1	ortholog of Bordetella pertussis (BX470248) BP2807
NP_890715.1	ortholog of Bordetella pertussis (BX470248) BP2806
NP_890716.1	catalyzes the transfer of palmitate to lipid A
NP_890717.1	ortholog of Bordetella pertussis (BX470248) BP3007
NP_890718.1	ortholog of Bordetella pertussis (BX470248) BP3008
NP_890719.1	ortholog of Bordetella pertussis (BX470248) BP3009
NP_890720.1	ortholog of Bordetella pertussis (BX470248) BP3010
NP_890721.1	ortholog of Bordetella pertussis (BX470248) BP3011
NP_890722.1	ortholog of Bordetella pertussis (BX470248) BP3012
NP_890723.1	ortholog of Bordetella pertussis (BX470248) BP3013
NP_890724.1	functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins
NP_890725.1	ortholog of Bordetella pertussis (BX470248) BP3015
NP_890726.1	ortholog of Bordetella pertussis (BX470248) BP3016
NP_890727.1	zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis
NP_890728.1	GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function
NP_890729.1	ortholog of Bordetella pertussis (BX470248) BP3019
NP_890730.1	ortholog of Bordetella pertussis (BX470248) BP3020
NP_890731.1	D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli
NP_890732.1	Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis
NP_890733.1	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis
NP_890734.1	ortholog of Bordetella pertussis (BX470248) BP3024
NP_890735.1	UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation
NP_890736.1	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
NP_890737.1	ortholog of Bordetella pertussis (BX470248) BP3027
NP_890738.1	ortholog of Bordetella pertussis (BX470248) BP3028
NP_890739.1	ortholog of Bordetella pertussis (BX470248) BP3029
NP_890740.1	ortholog of Bordetella pertussis (BX470248) BP3030; Similar to Escherichia coli S-adenosyl-methyltransferase MraW or b0082 or z0092 or ecs0086 SWALL:MRAW_ECOLI (SWALL:P18595) (313 aa) fasta scores: E(): 8.9e-52, 52.94% id in 289 aa, and to Neisseria meningitidis s-adenosyl-methyltransferase MraW or nma2074 SWALL:MRAW_NEIMA (SWALL:Q9JSY9) (328 aa) fasta scores: E(): 1.2e-58, 58.74% id in 303 aa
NP_890741.1	MraZ; UPF0040; crystal structure shows similarity to AbrB
NP_890742.1	ortholog of Bordetella pertussis (BX470248) BP3034
NP_890743.1	catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis
NP_890744.1	ortholog of Bordetella pertussis (BX470248) BP3036
NP_890745.1	ortholog of Bordetella pertussis (BX470248) BP3037
NP_890746.1	ortholog of Bordetella pertussis (BX470248) BP3038
NP_890747.1	ortholog of Bordetella pertussis (BX470248) BP3039
NP_890748.1	ortholog of Bordetella pertussis (BX470248) BP3040
NP_890749.1	this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress
NP_890750.1	ortholog of Bordetella pertussis (BX470248) BP3042
NP_890751.1	catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis
NP_890752.1	transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein
NP_890753.1	ortholog of Bordetella pertussis (BX470248) BP3045
NP_890754.1	ortholog of Bordetella pertussis (BX470248) BP3047
NP_890755.1	ortholog of Bordetella pertussis (BX470248) BP3048
NP_890756.1	ortholog of Bordetella pertussis (BX470248) BP3050
NP_890757.1	ortholog of Bordetella pertussis (BX470248) BP3051
NP_890758.1	ortholog of Bordetella pertussis (BX470248) BP3052
NP_890759.1	ortholog of Bordetella pertussis (BX470248) BP3053
NP_890760.1	ortholog of Bordetella pertussis (BX470248) BP0497+BP3054
NP_890761.1	ortholog of Bordetella pertussis (BX470248) BP0498
NP_890762.1	ortholog of Bordetella pertussis (BX470248) BP0499
NP_890763.1	ortholog of Bordetella pertussis (BX470248) BP0500
NP_890764.1	ortholog of Bordetella pertussis (BX470248) BP3351+BP0501
NP_890765.1	ortholog of Bordetella pertussis (BX470248) BP3350
NP_890766.1	hydrolyzes diadenosine polyphosphate
NP_890767.1	catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro)
NP_890768.1	ortholog of Bordetella pertussis (BX470248) BP3347
NP_890769.1	ortholog of Bordetella pertussis (BX470248) BP3346
NP_890770.1	ortholog of Bordetella pertussis (BX470248) BP3345
NP_890771.1	ortholog of Bordetella pertussis (BX470248) BP3344
NP_890772.1	forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA
NP_890773.1	ortholog of Bordetella pertussis (BX470248) BP3342
NP_890774.1	ortholog of Bordetella pertussis (BX470248) BP3341
NP_890775.1	ortholog of Bordetella pertussis (BX470248) BP3340
NP_890776.1	ortholog of Bordetella pertussis (BX470248) BP3339
NP_890777.1	ortholog of Bordetella pertussis (BX470248) BP3338
NP_890778.1	ortholog of Bordetella pertussis (BX470248) BP3337
NP_890784.1	ortholog of Bordetella pertussis (BX470248) BP0423
NP_890785.1	ortholog of Bordetella pertussis (BX470248) BP0422
NP_890786.1	ortholog of Bordetella pertussis (BX470248) BP0421
NP_890787.1	ortholog of Bordetella pertussis (BX470248) BP0420
NP_890788.1	ortholog of Bordetella pertussis (BX470248) BP0419
NP_890789.1	ortholog of Bordetella pertussis (BX470248) BP0418
NP_890790.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
NP_890791.1	ortholog of Bordetella pertussis (BX470248) BP0416
NP_890792.1	ortholog of Bordetella pertussis (BX470248) BP0415
NP_890793.1	ortholog of Bordetella pertussis (BX470248) BP0414
NP_890794.1	EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene
NP_890795.1	ortholog of Bordetella pertussis (BX470248) BP0410
NP_890796.1	ortholog of Bordetella pertussis (BX470248) BP0411
NP_890797.1	ortholog of Bordetella pertussis (BX470248) BP0412
NP_890798.1	ortholog of Bordetella pertussis (BX470248) BP0393
NP_890799.1	ortholog of Bordetella pertussis (BX470248) BP0394
NP_890800.1	ortholog of Bordetella pertussis (BX470248) BP0395
NP_890801.1	ortholog of Bordetella pertussis (BX470248) BP0396
NP_890802.1	ortholog of Bordetella pertussis (BX470248) BP0397
NP_890803.1	ortholog of Bordetella pertussis (BX470248) BP0398
NP_890804.1	ortholog of Bordetella pertussis (BX470248) BP0399
NP_890805.1	ortholog of Bordetella pertussis (BX470248) BP0400
NP_890806.1	ortholog of Bordetella pertussis (BX470248) BP0402
NP_890807.1	ortholog of Bordetella pertussis (BX470248) BP0403
NP_890808.1	ortholog of Bordetella pertussis (BX470248) BP0404
NP_890809.1	ortholog of Bordetella pertussis (BX470248) BP0405
NP_890810.1	3'-5' exonuclease of DNA polymerase III
NP_890811.1	ortholog of Bordetella pertussis (BX470248) BP0407
NP_890813.1	An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids
NP_890814.1	ortholog of Bordetella pertussis (BX470248) BP3212
NP_890815.1	Similar to Escherichia coli, and Escherichia coli O157:H7 probable hydroxyacylglutathione hydrolase glob or b0212 or z0236 or ecs0208 SWALL:GLO2_ECOLI (SWALL:Q47677) (251 aa) fasta scores: E(): 1.1e-36, 47.45% id in 255 aa; ortholog of Bordetella pertussis (BX470248) BP3213
NP_890816.1	ortholog of Bordetella pertussis (BX470248) BP3214
NP_890817.1	Catalyzes a key regulatory step in fatty acid biosynthesis
NP_890818.1	ortholog of Bordetella pertussis (BX470248) BP3217
NP_890819.1	ortholog of Bordetella pertussis (BX470248) BP3218
NP_890820.1	ortholog of Bordetella pertussis (BX470248) BP3219
NP_890821.1	catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide
NP_890822.1	ortholog of Bordetella pertussis (BX470248) BP3724
NP_890823.1	ortholog of Bordetella pertussis (BX470248) BP3723; no significant database matches
NP_890824.1	ortholog of Bordetella pertussis (BX470248) BP3722; Similar to Pseudomonas pseudoalcaligenes phenoxybenzoate dioxygenase alpha subunit pobA SWALL:POBA_PSEPS (SWALL:Q52185) (409 aa) fasta scores: E(): 4.5e-32, 37.15% id in 401 aa, and to Pseudomonas putida phthalate 4,5-dioxygenase oxygenase subunit pht3 SWALL:PHT3_PSEPU (SWALL:Q05183) (439 aa) fasta scores: E(): 9.7e-25, 31.32% id in 399 aa
NP_890825.1	ortholog of Bordetella pertussis (BX470248) BP3721; no significant database matches
NP_890826.1	ortholog of Bordetella pertussis (BX470248) BP3720; Similar to Streptomyces coelicolor  branched amino acid transport system permease sco7183 or sc8a11.11 SWALL:Q9FBZ9 (EMBL:AL391041) (290 aa) fasta scores: E(): 1.1e-34, 40.78% id in 282 aa, and to Burkholderia cepacia channel-forming polypeptide SWALL:Q8VUC1 (EMBL:AF169302) (294 aa) fasta scores: E(): 3.8e-28, 33.21% id in 283 aa
NP_890827.1	ortholog of Bordetella pertussis (BX470248) BP3719; Similar to Streptomyces coelicolor  branched amino acid transport system permease sco7184 or sc8a11.12 SWALL:Q9FBZ8 (EMBL:AL391041) (349 aa) fasta scores: E(): 8.9e-26, 32.09% id in 324 aa, and to Burkholderia cepacia channel-forming polypeptide SWALL:Q8VUC2 (EMBL:AF169302) (314 aa) fasta scores: E(): 1.7e-24, 34.06% id in 317 aa
NP_890828.1	ortholog of Bordetella pertussis (BX470248) BP3718; Similar to Agrobacterium tumefaciens ABC transporter nucleotide binding/ATPase rbsa or atu6069 or agr_pti_138 SWALL:Q8U666 (EMBL:AE009425) (528 aa) fasta scores: E(): 5.8e-23, 29.98% id in 527 aa, and to Rhizobium meliloti ABC transporter ATP-binding protein r02257 or smc01645 SWALL:Q92NE8 (EMBL:AL591790) (543 aa) fasta scores: E(): 2.6e-20, 27.82% id in 539 aa
NP_890829.1	ortholog of Bordetella pertussis (BX470248) BP3717; Similar to Escherichia coli hypothetical protein ylbe ylbe or b0519 SWALL:YLBE_ECOLI (SWALL:P77129) (419 aa) fasta scores: E(): 3.2e-27, 32.27% id in 409 aa, and to Salmonella typhi hypothetical protein Sty0578 sty0578 SWALL:Q8Z8Q2 (EMBL:AL627267) (415 aa) fasta scores: E(): 8.9e-27, 31.29% id in 409 aa
NP_890830.1	ortholog of Bordetella pertussis (BX470248) BP3716; Similar to Streptomyces coelicolor  branched amino acid binding secreted protein sco7185 or sc8a11.13 SWALL:Q9FBZ7 (EMBL:AL391041) (396 aa) fasta scores: E(): 1.8e-24, 29.91% id in 361 aa, and to Ralstonia solanacearum probable amino-acid-binding periplasmic rsc3329 or rs02563 SWALL:Q8XU64 (EMBL:AL646074) (382 aa) fasta scores: E(): 1.2e-22, 28.16% id in 387 aa
NP_890831.1	ortholog of Bordetella pertussis (BX470248) BP3715; Similar to Pseudomonas aeruginosa probable transcriptional regulator pa0218 SWALL:Q9I6S0 (EMBL:AE004459) (306 aa) fasta scores: E(): 2e-29, 34.42% id in 305 aa, and to Rhizobium loti transcriptional regulator mll7443 SWALL:Q986A7 (EMBL:AP003011) (303 aa) fasta scores: E(): 2.9e-20, 29.96% id in 287 aa
NP_890832.1	ortholog of Bordetella pertussis (BX470248) BP3714; Similar to Thermus thermophilus probable quinone oxidoreductase SWALL:BAB92082 (EMBL:AB085185) (302 aa) fasta scores: E(): 4e-07, 30.7% id in 228 aa, and to Myxococcus xanthus  oxidoreductase SWALL:Q8VQC9 (EMBL:AF457462) (325 aa) fasta scores: E(): 9.4e-06, 27.08% id in 240 aa
NP_890833.1	ortholog of Bordetella pertussis (BX470248) BP3713; Similar to Bradyrhizobium japonicum malonamidase e2 SWALL:Q9ZIV5 (EMBL:AF012735) (414 aa) fasta scores: E(): 2.2e-40, 39.15% id in 401 aa, and to Rhizobium meliloti amidase ra0756 or sma1377 SWALL:Q92YV7 (EMBL:AE007262) (471 aa) fasta scores: E(): 7e-29, 34.43% id in 395 aa
NP_890834.1	ortholog of Bordetella pertussis (BX470248) BP3712; Similar to Pseudomonas sp. CA10 reductase SWALL:Q9AQN2 (EMBL:AB047548) (315 aa) fasta scores: E(): 8.5e-45, 49.13% id in 289 aa, and to Caulobacter crescentus vanillate O-demethylase, reductase subunit cc2394 SWALL:Q9A5Q3 (EMBL:AE005908) (316 aa) fasta scores: E(): 7.6e-36, 42.81% id in 306 aa
NP_890835.1	ortholog of Bordetella pertussis (BX470248) BP3711; Similar to Escherichia coli NADH pyrophosphatase NudC or b3996 SWALL:NUDC_ECOLI (SWALL:P32664) (257 aa) fasta scores: E(): 3e-27, 46.38% id in 166 aa, and to Pseudomonas aeruginosa NADH pyrophosphatase NudC or pa1823 SWALL:NUDC_PSEAE (SWALL:O86062) (278 aa) fasta scores: E(): 5.1e-35, 51.87% id in 187 aa
NP_890836.1	ortholog of Bordetella pertussis (BX470248) BP3710; Similar to Deinococcus radiodurans transcriptional regulator, tetr family dr2376 SWALL:Q9RRV9 (EMBL:AE002068) (197 aa) fasta scores: E(): 2.6e-09, 28.71% id in 195 aa, and to Mycobacterium tuberculosis hypothetical 24.1 kDa protein rv0158 or mtv032.01 or mt0167 SWALL:O53641 (EMBL:AL021927) (214 aa) fasta scores: E(): 3.7e-08, 29% id in 200 aa
NP_890837.1	ortholog of Bordetella pertussis (BX470248) BP3709; Similar to Rhodococcus sp. AD45  racemase isoG SWALL:Q9RBP6 (EMBL:AJ249207) (405 aa) fasta scores: E(): 3.1e-50, 38% id in 400 aa, and to Streptomyces coelicolor racemase sco0362 or scf41.21 SWALL:Q9RJU8 (EMBL:AL117387) (403 aa) fasta scores: E(): 3.6e-41, 37.81% id in 402 aa
NP_890838.1	ortholog of Bordetella pertussis (BX470248) BP3708; Similar to Ralstonia solanacearum probable oxidoreductase rsc1203 or rs02677 SWALL:Q8Y041 (EMBL:AL646063) (324 aa) fasta scores: E(): 6.5e-45, 42.77% id in 332 aa, and to Pseudomonas aeruginosa probable oxidoreductase pa5234 SWALL:Q9HTV6 (EMBL:AE004936) (325 aa) fasta scores: E(): 2.8e-43, 40.18% id in 331 aa
NP_890839.1	ortholog of Bordetella pertussis (BX470248) BP3707; Similar to Rhizobium meliloti hypothetical protein ra1058 ra1058 or sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 7e-37, 37.29% id in 311 aa, and to Comamonas testosteroni Orf4 protein orf4 SWALL:Q9S155 (EMBL:AB024335) (325 aa) fasta scores: E(): 8.4e-35, 36.99% id in 319 aa
NP_890840.1	ortholog of Bordetella pertussis (BX470248) BP3706; Similar to Clostridium acetobutylicum 3-hydroxybutyryl-CoA dehydratase crt or cac2712 SWALL:CRT_CLOAB (SWALL:P52046) (261 aa) fasta scores: E(): 2.9e-25, 39.92% id in 253 aa, and to Thermoanaerobacter tengcongensis enoyl-CoA hydratase/carnithine racemase caid or tte0544 SWALL:Q8RC92 (EMBL:AE013024) (260 aa) fasta scores: E(): 2.8e-28, 38.28% id in 256 aa
NP_890841.1	ortholog of Bordetella pertussis (BX470248) BP3705; Similar to Rhizobium loti ATP-binding protein of ABC transporter mll1253 SWALL:Q98KZ4 (EMBL:AP002997) (267 aa) fasta scores: E(): 4.9e-42, 49.07% id in 271 aa, and to Methanococcus jannaschii hypothetical ABC transporter ATP-binding protein Mj0412 mj0412 SWALL:Y412_METJA (SWALL:Q57855) (267 aa) fasta scores: E(): 8.3e-42, 45.88% id in 255 aa
NP_890842.1	ortholog of Bordetella pertussis (BX470248) BP3704; Similar to Bacillus subtilis  aliphatic sulfonates binding protein precursor ssuA SWALL:SSUA_BACSU (SWALL:P40400) (332 aa) fasta scores: E(): 7.9e-10, 28.75% id in 240 aa, and to Brucella melitensis aliphatic sulfonates-binding lipoprotein bmeii0109 SWALL:Q8YDR6 (EMBL:AE009649) (319 aa) fasta scores: E(): 5.6e-09, 26.33% id in 262 aa
NP_890843.1	ortholog of Bordetella pertussis (BX470248) BP3703; Similar to Escherichia coli taurine transport system permease tauc tauc or ssic or b0367 SWALL:TAUC_ECOLI (SWALL:Q47539) (275 aa) fasta scores: E(): 3.9e-34, 36.32% id in 256 aa, and to Escherichia coli O157:H7 taurine transport system permease tauc or z0466 or ecs0421 SWALL:Q8X5I4 (EMBL:AE005216) (275 aa) fasta scores: E(): 5.9e-34, 36.32% id in 256 aa
NP_890844.1	ortholog of Bordetella pertussis (BX470248) BP3702; Similar to Ralstonia solanacearum probable transcription regulator protein rsp1506 or rs03035 SWALL:Q8XPY0 (EMBL:AL646085) (240 aa) fasta scores: E(): 3e-10, 26.33% id in 224 aa, and to Ralstonia solanacearum probable transcription regulator protein rsc1997 or rs03565 SWALL:Q8XXW6 (EMBL:AL646067) (274 aa) fasta scores: E(): 5.9e-08, 23% id in 213 aa
NP_890845.1	ortholog of Bordetella pertussis (BX470248) BP3701; Similar to Brucella melitensis aliphatic sulfonates-binding lipoprotein bmeii0109 SWALL:Q8YDR6 (EMBL:AE009649) (319 aa) fasta scores: E(): 2.4e-13, 28.12% id in 256 aa, and to Bacillus subtilis  aliphatic sulfonates binding protein precursor ssuA SWALL:SSUA_BACSU (SWALL:P40400) (332 aa) fasta scores: E(): 2.5e-12, 28.88% id in 270 aa
NP_890846.1	ortholog of Bordetella pertussis (BX470248) BP3700
NP_890847.1	ortholog of Bordetella pertussis (BX470248) BP3699
NP_890853.1	ortholog of Bordetella pertussis (BX470248) BP3165
NP_890854.1	ortholog of Bordetella pertussis (BX470248) BP3166
NP_890855.1	ortholog of Bordetella pertussis (BX470248) BP3167
NP_890856.1	involved in the assembly of the urease metallocenter; possible nickel donor
NP_890857.1	ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits
NP_890858.1	ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta); in Brucella suis the urease encoded by this operon (one of two urease-encoding operons found in its genome) is involved with urease activity, optimum growth, resistance to low-pH killing in-vitro and persistence in-vivo, while the other operon does not seem to be active
NP_890859.1	ortholog of Bordetella pertussis (BX470248) BP3170
NP_890860.1	UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter
NP_890861.1	ortholog of Bordetella pertussis (BX470248) BP3172
NP_890862.1	Previously sequenced as Bordetella bronchiseptica probable transcriptional regulator BbuR SWALL:BBUR_BORBR (SWALL:O06703) (343 aa) fasta scores: E(): 3.4e-108, 100% id in 286 aa
NP_890863.1	previously sequenced as Bordetella bronchiseptica hypothetical protein in bbur 5'region precursor SWALL:YBBU_BORBR (SWALL:O06702) (311 aa) fasta scores: E(): 1.3e-106, 100% id in 311 aa. Similar to Rhizobium meliloti hypothetical protein ra1058 or sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 3.6e-33, 37.66% id in 308 aa
NP_890864.1	Similar to Agrobacterium tumefaciens hypothetical protein atu4727 atu4727 or agr_l_312 SWALL:Q8U6S9 (EMBL:AE009401) (329 aa) fasta scores: E(): 4.8e-35, 38.72% id in 315 aa, and to Rhizobium meliloti hypothetical protein ra1058 ra1058 or sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 1e-31, 37.07% id in 321 aa
NP_890865.1	Similar to Pseudomonas aeruginosa hypothetical protein Pa1016 pa1016 SWALL:Q9I4V7 (EMBL:AE004534) (383 aa) fasta scores: E(): 2e-43, 38.7% id in 385 aa, and to Mycobacterium tuberculosis hypothetical 40.6 kDa protein ltp2 or rv3540c or mtcy03c7.16 or mt3644 SWALL:P71861 (EMBL:Z82098) (386 aa) fasta scores: E(): 1e-30, 39.74% id in 385 aa
NP_890866.1	Similar to Methanopyrus kandleri predicted nucleic-acid-binding protein containing a zn-ribbon mk1377 SWALL:Q8TVL2 (EMBL:AE010431) (134 aa) fasta scores: E(): 1.4e-08, 32.43% id in 111 aa, and to Thermoplasma volcanium hypothetical protein tv0134 tv0134 or tvg0142586 SWALL:Q97CG7 (EMBL:AP000991) (135 aa) fasta scores: E(): 4.1e-08, 33.05% id in 121 aa
NP_890867.1	Similar to Thauera aromatica BbsE SWALL:Q9KJF0 (EMBL:AF173961) (410 aa) fasta scores: E(): 4.9e-43, 38.15% id in 380 aa, and to Sphingomonas aromaticivorans hypothetical 41.0 kDa protein orf1338 SWALL:O86014 (EMBL:AF079317) (388 aa) fasta scores: E(): 4.1e-23, 31.39% id in 395 aa
NP_890868.1	Similar to Thauera aromatica BbsF SWALL:Q9KJE9 (EMBL:AF173961) (409 aa) fasta scores: E(): 2.6e-56, 42% id in 400 aa, and to Ralstonia solanacearum  transmembrane protein rsc0796 or rs05041 SWALL:Q8Y194 (EMBL:AL646061) (420 aa) fasta scores: E(): 5.4e-42, 35.73% id in 417 aa
NP_890869.1	Similar to Rhizobium sp. hypothetical 33.9 kDa protein Y4mH y4mH SWALL:Y4MH_RHISN (SWALL:P55567) (297 aa) fasta scores: E(): 1.5e-05, 32.42% id in 330 aa, and to Neurospora crassa conserved hypothetical protein b11h24.110 SWALL:Q8X0J2 (EMBL:AL670005) (359 aa) fasta scores: E(): 0.00028, 24.71% id in 348 aa
NP_890870.1	ortholog of Bordetella pertussis (BX470248) BP3176
NP_890871.1	ortholog of Bordetella pertussis (BX470248) BP3177
NP_890872.1	ortholog of Bordetella pertussis (BX470248) BP3178
NP_890873.1	ortholog of Bordetella pertussis (BX470248) BP3179
NP_890874.1	ortholog of Bordetella pertussis (BX470248) BP3180
NP_890875.1	ortholog of Bordetella pertussis (BX470248) BP3181
NP_890876.1	ortholog of Bordetella pertussis (BX470248) BP3182
NP_890877.1	ortholog of Bordetella pertussis (BX470248) BP3183
NP_890878.1	ortholog of Bordetella pertussis (BX470248) BP2948
NP_890879.1	ortholog of Bordetella pertussis (BX470248) BP2949
NP_890880.1	ortholog of Bordetella pertussis (BX470248) BP2950
NP_890881.1	ortholog of Bordetella pertussis (BX470248) BP2951
NP_890882.1	catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate
NP_890883.1	ortholog of Bordetella pertussis (BX470248) BP2953
NP_890884.1	catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr)
NP_890885.1	ortholog of Bordetella pertussis (BX470248) BP2956
NP_890886.1	catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling
NP_890887.1	essential respiratory protein A; may be involved in the transfer of iron-sulfur clusters; essential for growth using oxygen or alternate electron acceptors
NP_890888.1	ortholog of Bordetella pertussis (BX470248) BP2959
NP_890889.1	catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate
NP_890890.1	forms a direct contact with the tRNA during translation
NP_890891.2	in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit
NP_890892.1	ortholog of Bordetella pertussis (BX470248) BP2963
NP_890893.1	ortholog of Bordetella pertussis (BX470248) BP2964
NP_890894.1	ortholog of Bordetella pertussis (BX470248) BP2965
NP_890895.1	ortholog of Bordetella pertussis (BX470248) BP2966
NP_890896.1	ortholog of Bordetella pertussis (BX470248) BP2967
NP_890897.1	ortholog of Bordetella pertussis (BX470248) BP2969
NP_890898.1	ortholog of Bordetella pertussis (BX470248) BP2970
NP_890899.1	ortholog of Bordetella pertussis (BX470248) BP2971
NP_890900.1	ortholog of Bordetella pertussis (BX470248) BP2972
NP_890901.1	exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA
NP_890902.1	ortholog of Bordetella pertussis (BX470248) BP2974
NP_890903.1	ortholog of Bordetella pertussis (BX470248) BP2975
NP_890904.1	ortholog of Bordetella pertussis (BX470248) BP2977
NP_890905.1	Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation
NP_890906.1	ortholog of Bordetella pertussis (BX470248) BP2979
NP_890907.1	ortholog of Bordetella pertussis (BX470248) BP2980
NP_890908.1	ortholog of Bordetella pertussis (BX470248) BP2981
NP_890909.1	catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates
NP_890910.1	Catalyzes the rate-limiting step in dNTP synthesis
NP_890911.1	Catalyzes the rate-limiting step in dNTP synthesis
NP_890912.1	ortholog of Bordetella pertussis (BX470248) bpH1
NP_890913.1	ortholog of Bordetella pertussis (BX470248) BP2986
NP_890914.1	ortholog of Bordetella pertussis (BX470248) BP2987
NP_890915.1	ortholog of Bordetella pertussis (BX470248) BP2988
NP_890916.1	ortholog of Bordetella pertussis (BX470248) BP2989
NP_890917.1	ortholog of Bordetella pertussis (BX470248) BP2990
NP_890918.1	ortholog of Bordetella pertussis (BX470248) BP2991
NP_890919.1	ortholog of Bordetella pertussis (BX470248) BP2992
NP_890920.1	ortholog of Bordetella pertussis (BX470248) BP2993
NP_890921.1	ortholog of Bordetella pertussis (BX470248) BP2994
NP_890922.1	methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype
NP_890923.1	an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism
NP_890924.1	composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism
NP_890925.1	catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis
NP_890926.1	ortholog of Bordetella pertussis (BX470248) BP2999
NP_890927.1	ortholog of Bordetella pertussis (BX470248) BP3000
NP_890928.1	ortholog of Bordetella pertussis (BX470248) BP3001
NP_890929.1	ortholog of Bordetella pertussis (BX470248) BP3002
NP_890930.1	ortholog of Bordetella pertussis (BX470248) BP3003
NP_890931.1	AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate
NP_890932.1	glycosyltransferase; polymerizes glycan strands in the peptidoglycan
NP_890933.1	ortholog of Bordetella pertussis (BX470248) BP0325
NP_890934.1	hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP
NP_890935.1	ortholog of Bordetella pertussis (BX470248) BP0323
NP_890936.1	Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides
NP_890937.1	catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis
NP_890938.1	similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function
NP_890939.2	ortholog of Bordetella pertussis (BX470248) BP0319
NP_890940.1	ortholog of Bordetella pertussis (BX470248) BP0318
NP_890941.1	ortholog of Bordetella pertussis (BX470248) BP0317
NP_890942.1	Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate
NP_890943.1	Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway
NP_890944.1	ortholog of Bordetella pertussis (BX470248) BP0314
NP_890945.1	ortholog of Bordetella pertussis (BX470248) BP0313
NP_890946.1	ortholog of Bordetella pertussis (BX470248) BP0312
NP_890947.1	ortholog of Bordetella pertussis (BX470248) BP0311
NP_890948.1	ortholog of Bordetella pertussis (BX470248) BP0310
NP_890949.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
NP_890950.1	ortholog of Bordetella pertussis (BX470248) BP0308
NP_890951.1	catalyzes the conversion of salicylyl-CoA to gentisyl-CoA
NP_890952.1	ortholog of Bordetella pertussis (BX470248) BP0305
NP_890953.1	ortholog of Bordetella pertussis (BX470248) BP0304
NP_890954.1	ortholog of Bordetella pertussis (BX470248) BP0303
NP_890955.1	ortholog of Bordetella pertussis (BX470248) BP0302
NP_890956.1	ortholog of Bordetella pertussis (BX470248) BP0301
NP_890957.1	ortholog of Bordetella pertussis (BX470248) BP0300
NP_890958.1	ortholog of Bordetella pertussis (BX470248) BP0299
NP_890959.1	ortholog of Bordetella pertussis (BX470248) BP0298
NP_890960.1	bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate
NP_890961.1	ortholog of Bordetella pertussis (BX470248) BP3808
NP_890962.1	ortholog of Bordetella pertussis (BX470248) BP3809
NP_890963.1	ortholog of Bordetella pertussis (BX470248) BP3812
NP_890964.1	ortholog of Bordetella pertussis (BX470248) BP3813
NP_890965.1	ortholog of Bordetella pertussis (BX470248) BP3814
NP_890966.1	ortholog of Bordetella pertussis (BX470248) BP3815
NP_890967.1	ortholog of Bordetella pertussis (BX470248) BP3816
NP_890968.1	catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis
NP_890969.1	ortholog of Bordetella pertussis (BX470248) BP3818
NP_890970.1	ortholog of Bordetella pertussis (BX470248) BP3819
NP_890971.1	ortholog of Bordetella pertussis (BX470248) BP3820
NP_890972.1	catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine
NP_890973.1	ortholog of Bordetella pertussis (BX470248) BP3822
NP_890974.1	ortholog of Bordetella pertussis (BX470248) BP3823
NP_890975.1	ortholog of Bordetella pertussis (BX470248) BP3824
NP_890976.1	Converts glycerol and ADP to glycerol-3-phosphate and ADP
NP_890977.1	ortholog of Bordetella pertussis (BX470248) BP3826
NP_890978.1	ortholog of Bordetella pertussis (BX470248) BP3827
NP_890979.1	ortholog of Bordetella pertussis (BX470248) BP3828
NP_890980.1	ortholog of Bordetella pertussis (BX470248) BP3829
NP_890981.1	ortholog of Bordetella pertussis (BX470248) BP3830
NP_890982.1	ortholog of Bordetella pertussis (BX470248) BP3831
NP_890983.1	ortholog of Bordetella pertussis (BX470248) BP3832
NP_890984.1	ortholog of Bordetella pertussis (BX470248) BP3833
NP_890985.1	catalyzes the conversion of glutamine residues to glutamate on methyl-accepting chemotaxis receptors
NP_890986.1	Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates
NP_890987.1	ortholog of Bordetella pertussis (BX470248) BP3836
NP_890988.1	ortholog of Bordetella pertussis (BX470248) BP3837
NP_890989.1	ortholog of Bordetella pertussis (BX470248) BP3838
NP_890990.1	one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity
NP_890991.1	ortholog of Bordetella pertussis (BX470248) BP3595
NP_890992.1	ortholog of Bordetella pertussis (BX470248) BP3596
NP_890993.1	functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate
NP_890994.1	ortholog of Bordetella pertussis (BX470248) BP3598
NP_890995.1	ortholog of Bordetella pertussis (BX470248) BP3599
NP_890996.1	ortholog of Bordetella pertussis (BX470248) BP3600
NP_890997.1	ortholog of Bordetella pertussis (BX470248) BP3602
NP_890998.1	ortholog of Bordetella pertussis (BX470248) BP0165
NP_890999.1	an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone; functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis; similar to eukaryotic proteins that exhibit kinase functions
NP_891000.1	ortholog of Bordetella pertussis (BX470248) BP0163
NP_891001.1	ortholog of Bordetella pertussis (BX470248) BP0162
NP_891002.1	Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone
NP_891003.1	ortholog of Bordetella pertussis (BX470248) BP0160
NP_891004.1	ortholog of Bordetella pertussis (BX470248) BP0159
NP_891005.1	ortholog of Bordetella pertussis (BX470248) BP0158
NP_891006.1	ortholog of Bordetella pertussis (BX470248) BP0157
NP_891007.1	ortholog of Bordetella pertussis (BX470248) BP0156
NP_891008.1	catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate
NP_891009.1	ortholog of Bordetella pertussis (BX470248) BP0154
NP_891010.1	ortholog of Bordetella pertussis (BX470248) BP0153
NP_891011.1	ortholog of Bordetella pertussis (BX470248) BP0152
NP_891012.1	ortholog of Bordetella pertussis (BX470248) BP0151
NP_891013.1	ortholog of Bordetella pertussis (BX470248) BP0150
NP_891014.1	ortholog of Bordetella pertussis (BX470248) BP0149
NP_891015.1	ortholog of Bordetella pertussis (BX470248) BP0148
NP_891016.1	ortholog of Bordetella pertussis (BX470248) BP0146
NP_891017.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
NP_891018.1	ortholog of Bordetella pertussis (BX470248) BP0144
NP_891019.1	ortholog of Bordetella pertussis (BX470248) BP0143
NP_891020.1	ortholog of Bordetella pertussis (BX470248) BP0142
NP_891021.1	ortholog of Bordetella pertussis (BX470248) BP0141
NP_891022.1	ortholog of Bordetella pertussis (BX470248) BP0140
NP_891023.1	threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway
NP_891024.1	ortholog of Bordetella pertussis (BX470248) BP0267+BP0138
NP_891025.1	ortholog of Bordetella pertussis (BX470248) BP0266
NP_891026.1	ortholog of Bordetella pertussis (BX470248) BP0265
NP_891027.1	catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis
NP_891028.1	ortholog of Bordetella pertussis (BX470248) BP0263
NP_891029.1	ortholog of Bordetella pertussis (BX470248) BP0262
NP_891030.1	ortholog of Bordetella pertussis (BX470248) BP0261
NP_891031.1	ortholog of Bordetella pertussis (BX470248) BP0260
NP_891032.1	ortholog of Bordetella pertussis (BX470248) BP0259
NP_891033.1	ortholog of Bordetella pertussis (BX470248) BP0258
NP_891034.1	non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis
NP_891035.1	ortholog of Bordetella pertussis (BX470248) BP0701
NP_891036.1	ortholog of Bordetella pertussis (BX470248) BP0700
NP_891037.1	ortholog of Bordetella pertussis (BX470248) BP0699
NP_891038.1	ortholog of Bordetella pertussis (BX470248) BP0698
NP_891039.1	ortholog of Bordetella pertussis (BX470248) BP0697
NP_891040.1	ortholog of Bordetella pertussis (BX470248) BP0696
NP_891041.1	ortholog of Bordetella pertussis (BX470248) BP0694
NP_891042.1	catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system
NP_891043.1	ortholog of Bordetella pertussis (BX470248) BP0692
NP_891044.1	ortholog of Bordetella pertussis (BX470248) BP0691
NP_891045.1	ortholog of Bordetella pertussis (BX470248) BP0690
NP_891046.1	ortholog of Bordetella pertussis (BX470248) BP0689
NP_891047.1	ortholog of Bordetella pertussis (BX470248) BP0391
NP_891048.1	ortholog of Bordetella pertussis (BX470248) BP0390
NP_891049.1	ortholog of Bordetella pertussis (BX470248) BP0389
NP_891050.1	catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate
NP_891051.1	ortholog of Bordetella pertussis (BX470248) BP0387
NP_891052.1	ortholog of Bordetella pertussis (BX470248) BP0386
NP_891053.1	ortholog of Bordetella pertussis (BX470248) BP0385
NP_891054.1	catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate
NP_891055.1	ortholog of Bordetella pertussis (BX470248) BP0382
NP_891056.2	FtsZ binding protein; synthetically lethal with a defect in the Min system; this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly
NP_891057.1	ortholog of Bordetella pertussis (BX470248) BP0380
NP_891058.1	ortholog of Bordetella pertussis (BX470248) BP0379
NP_891059.1	ortholog of Bordetella pertussis (BX470248) BP0378
NP_891060.1	ortholog of Bordetella pertussis (BX470248) BP0377
NP_891061.1	ortholog of Bordetella pertussis (BX470248) BP0376
NP_891062.1	in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall
NP_891063.1	functions in MreBCD complex in some organisms
NP_891064.2	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain
NP_891065.1	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA
NP_891066.1	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA
NP_891067.1	involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate
NP_891068.1	ortholog of Bordetella pertussis (BX470248) BP0369
NP_891069.1	converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer
NP_891070.1	ortholog of Bordetella pertussis (BX470248) BP0367
NP_891071.1	ortholog of Bordetella pertussis (BX470248) BP0366
NP_891079.1	catalyzes the formation of pyruvate from D-cysteine
NP_891080.1	ortholog of Bordetella pertussis (BX470248) BP0057
NP_891081.1	ortholog of Bordetella pertussis (BX470248) BP0056
NP_891082.1	ortholog of Bordetella pertussis (BX470248) BP0055
NP_891083.1	ortholog of Bordetella pertussis (BX470248) BP0054
NP_891084.1	ortholog of Bordetella pertussis (BX470248) BP0053
NP_891085.1	ortholog of Bordetella pertussis (BX470248) BP0051
NP_891086.1	ortholog of Bordetella pertussis (BX470248) BP0050
NP_891087.1	ortholog of Bordetella pertussis (BX470248) BP0048
NP_891088.1	Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine
NP_891089.1	ortholog of Bordetella pertussis (BX470248) BP0046
NP_891090.1	ortholog of Bordetella pertussis (BX470248) BP0045
NP_891091.1	ortholog of Bordetella pertussis (BX470248) BP0044
NP_891092.1	ortholog of Bordetella pertussis (BX470248) BP0043
NP_891093.1	ortholog of Bordetella pertussis (BX470248) BP0042
NP_891094.1	involved in the first step of glutathione biosynthesis
NP_891098.1	ortholog of Bordetella pertussis (BX470248) BP2849
NP_891099.1	catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate
NP_891100.1	ortholog of Bordetella pertussis (BX470248) BP2851
NP_891106.1	ortholog of Bordetella pertussis (BX470248) BP3322
NP_891107.1	ortholog of Bordetella pertussis (BX470248) BP3320
NP_891108.1	ortholog of Bordetella pertussis (BX470248) BP3319
NP_891109.1	ortholog of Bordetella pertussis (BX470248) BP3318
NP_891110.1	ortholog of Bordetella pertussis (BX470248) BP3317
NP_891111.1	ortholog of Bordetella pertussis (BX470248) BP3316
NP_891112.1	ortholog of Bordetella pertussis (BX470248) BP3315
NP_891113.1	ortholog of Bordetella pertussis (BX470248) BP3314
NP_891115.1	converts 3-hydroxyadipyl-CoA to beta-ketoadipyl-CoA in phenylacetate degradation
NP_891116.1	ortholog of Bordetella pertussis (BX470248) BP3309
NP_891117.1	ortholog of Bordetella pertussis (BX470248) BP3308
NP_891118.1	ortholog of Bordetella pertussis (BX470248) BP3307
NP_891119.1	ortholog of Bordetella pertussis (BX470248) BP3306
NP_891120.1	ortholog of Bordetella pertussis (BX470248) BP3305
NP_891121.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
NP_891122.1	ortholog of Bordetella pertussis (BX470248) BP3303
NP_891123.1	ortholog of Bordetella pertussis (BX470248) BP3302
NP_891124.1	ortholog of Bordetella pertussis (BX470248) BP3301
NP_891125.1	ortholog of Bordetella pertussis (BX470248) BP3300
NP_891126.1	ortholog of Bordetella pertussis (BX470248) BP3299
NP_891127.1	ortholog of Bordetella pertussis (BX470248) BP3298
NP_891128.1	ortholog of Bordetella pertussis (BX470248) BP3297
NP_891129.1	ortholog of Bordetella pertussis (BX470248) BP3297
NP_891130.1	ortholog of Bordetella pertussis (BX470248) BP3296
NP_891131.1	ortholog of Bordetella pertussis (BX470248) BP3295
NP_891132.1	ortholog of Bordetella pertussis (BX470248) BP3293
NP_891133.1	ortholog of Bordetella pertussis (BX470248) BP3292
NP_891134.1	catalyzes the formation of coproporphyrinogen from uroporphyrinogen III
NP_891135.1	ortholog of Bordetella pertussis (BX470248) BP3290
NP_891136.1	part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane
NP_891137.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit
NP_891138.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit
NP_891139.1	produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit
NP_891140.1	Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex
NP_891141.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.
NP_891142.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0
NP_891143.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0
NP_891144.1	ortholog of Bordetella pertussis (BX470248) BP3281
NP_891145.1	ortholog of Bordetella pertussis (BX470248) BP3280
NP_891146.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
NP_891147.1	ortholog of Bordetella pertussis (BX470248) BP3276
NP_891148.1	ortholog of Bordetella pertussis (BX470248) BP3275
NP_891149.1	ortholog of Bordetella pertussis (BX470248) BP3274
NP_891150.1	TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs
NP_891151.1	ortholog of Bordetella pertussis (BX470248) BP3271
NP_891152.1	ortholog of Bordetella pertussis (BX470248) BP3270
NP_891153.1	ortholog of Bordetella pertussis (BX470248) BP3269
NP_891154.1	ortholog of Bordetella pertussis (BX470248) BP3268
NP_891155.1	protein associated with Co2+ and Mg2+ efflux
NP_891156.1	ortholog of Bordetella pertussis (BX470248) BP3266
NP_891157.1	ortholog of Bordetella pertussis (BX470248) BP3265
NP_891158.1	with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine
NP_891159.1	TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity
NP_891160.1	Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate
NP_891161.1	involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water
NP_891167.1	ortholog of Bordetella pertussis (BX470248) BP3258
NP_891171.1	ortholog of Bordetella pertussis (BX470248) BP0364
NP_891172.1	ortholog of Bordetella pertussis (BX470248) BP0363
NP_891173.1	ortholog of Bordetella pertussis (BX470248) BP0362
NP_891174.1	ortholog of Bordetella pertussis (BX470248) BP0361
NP_891175.1	ortholog of Bordetella pertussis (BX470248) BP0360
NP_891176.1	ortholog of Bordetella pertussis (BX470248) BP0359
NP_891177.1	ortholog of Bordetella pertussis (BX470248) BP0358
NP_891178.1	ortholog of Bordetella pertussis (BX470248) BP0357
NP_891179.1	ortholog of Bordetella pertussis (BX470248) BP0356
NP_891180.1	ortholog of Bordetella pertussis (BX470248) BP0354
NP_891181.1	ortholog of Bordetella pertussis (BX470248) BP0353
NP_891182.1	ortholog of Bordetella pertussis (BX470248) BP0352
NP_891183.1	ortholog of Bordetella pertussis (BX470248) BP0351
NP_891184.1	ortholog of Bordetella pertussis (BX470248) BP0350
NP_891185.1	ortholog of Bordetella pertussis (BX470248) BP0349
NP_891186.1	ortholog of Bordetella pertussis (BX470248) BP0348
NP_891187.1	ortholog of Bordetella pertussis (BX470248) BP0347
NP_891188.1	ortholog of Bordetella pertussis (BX470248) BP0346
NP_891189.1	ortholog of Bordetella pertussis (BX470248) BP0345
NP_891190.1	ortholog of Bordetella pertussis (BX470248) BP0344
NP_891191.1	with HmuTU is involved in the transport of hemin
NP_891192.1	ortholog of Bordetella pertussis (BX470248) BP0342
NP_891193.1	ortholog of Bordetella pertussis (BX470248) BP0341
NP_891194.1	ortholog of Bordetella pertussis (BX470248) BP0340
NP_891195.1	ortholog of Bordetella pertussis (BX470248) BP0339
NP_891196.1	ortholog of Bordetella pertussis (BX470248) BP0338
NP_891197.1	ortholog of Bordetella pertussis (BX470248) BP0337
NP_891198.1	ortholog of Bordetella pertussis (BX470248) BP0336
NP_891199.1	ortholog of Bordetella pertussis (BX470248) BP0335
NP_891200.1	ortholog of Bordetella pertussis (BX470248) BP0334
NP_891201.1	ortholog of Bordetella pertussis (BX470248) BP0333
NP_891216.1	Similar to Alcaligenes eutrophus L-lactate dehydrogenase ldH SWALL:LDH_ALCEU (SWALL:Q07251) (349 aa) fasta scores: E(): 5.2e-24, 33.05% id in 354 aa, and to Rhizobium loti probable malate dehydrogenase mlr9216 SWALL:Q981V8 (EMBL:AP003015) (366 aa) fasta scores: E(): 3.6e-22, 29.78% id in 329 aa
NP_891217.1	Similar to Deinococcus radiodurans transcriptional regulator, gntr family dr1905 SWALL:Q9RT60 (EMBL:AE002029) (245 aa) fasta scores: E(): 7.1e-16, 30.63% id in 222 aa, and to Ralstonia solanacearum probable transcriptional regulatory DNA-binding transcription regulator protein rsc1078 or rs04109 SWALL:Q8Y0G6 (EMBL:AL646062) (255 aa) fasta scores: E(): 1.5e-13, 32.9% id in 234 aa
NP_891218.1	Similar to Agrobacterium tumefaciens NAD/NADP dependent oxidoreductase atu0990 or agr_c_1817 SWALL:Q8UGP5 (EMBL:AE009064) (293 aa) fasta scores: E(): 1e-36, 47.17% id in 265 aa, and to Rhizobium meliloti oxidoreductase r00362 or smc01157 SWALL:Q92SK9 (EMBL:AL591783) (259 aa) fasta scores: E(): 1.7e-35, 47.14% id in 263 aa
NP_891219.1	Similar to Sulfolobus solfataricus mandelate racemase /muconate lactonizing enzyme related protein sso3124 SWALL:Q97U96 (EMBL:AE006902) (373 aa) fasta scores: E(): 1.1e-32, 35.71% id in 336 aa, and to Pseudomonas aeruginosa hypothetical protein Pa2215 pa2215 SWALL:Q9I1Q2 (EMBL:AE004648) (391 aa) fasta scores: E(): 4.7e-31, 33.72% id in 344 aa
NP_891220.1	Similar to Streptomyces coelicolor sc8d9.09 protein sco5497 or sc8d9.09 SWALL:Q9Z582 (EMBL:AL035569) (164 aa) fasta scores: E(): 0.00041, 36.7% id in 79 aa, and to Pyrobaculum aerophilum hypothetical protein Pae2796 pae2796 SWALL:Q8ZUG4 (EMBL:AE009894) (110 aa) fasta scores: E(): 0.01, 32.46% id in 77 aa
NP_891221.1	ortholog of Bordetella pertussis (BX470248) BP0612; Similar to Rhizobium meliloti hypothetical protein ra1058 ra1058 or sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 3.5e-36, 36.08% id in 327 aa, and to Comamonas testosteroni OrfJ protein orfJ SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 1.5e-34, 35.36% id in 328 aa
NP_891222.1	ortholog of Bordetella pertussis (BX470248) BP0613; Similar to Ralstonia solanacearum probable transcription regulator protein rsc0300 or rs03267 SWALL:Q8Y2N5 (EMBL:AL646058) (290 aa) fasta scores: E(): 1.3e-34, 42.63% id in 258 aa, and to Ralstonia solanacearum probable transcription regulator protein rsp0704 or rs01745 SWALL:Q8XRX7 (EMBL:AL646080) (311 aa) fasta scores: E(): 1.2e-28, 38.11% id in 265 aa
NP_891223.1	ortholog of Bordetella pertussis (BX470248) BP0614; Similar to Pseudomonas aeruginosa hypothetical protein Pa2243 pa2243 SWALL:Q9I1M6 (EMBL:AE004650) (577 aa) fasta scores: E(): 4.1e-91, 47.71% id in 570 aa, and to Corynebacterium glutamicum succinate dehydrogenase/fumarate reductase, flavoprotein subunits cgl2633 SWALL:BAC00027 (EMBL:AP005282) (563 aa) fasta scores: E(): 5.1e-77, 40.9% id in 555 aa
NP_891224.1	ortholog of Bordetella pertussis (BX470248) BP0615; Similar to Xanthomonas axonopodis hypothetical protein Xac2278 xac2278 SWALL:AAM37131 (EMBL:AE011865) (315 aa) fasta scores: E(): 9.8e-35, 36.84% id in 323 aa, and to Comamonas testosteroni Orf4 protein orf4 SWALL:Q9S155 (EMBL:AB024335) (325 aa) fasta scores: E(): 4.2e-32, 38.78% id in 312 aa
NP_891225.1	ortholog of Bordetella pertussis (BX470248) BP0616; Similar to Mycobacterium tuberculosis hypothetical protein rv3510c rv3510c or mtv023.17 or mt3614 SWALL:O53555 (EMBL:AL022022) (278 aa) fasta scores: E(): 7.6e-15, 27.69% id in 278 aa, and to Mycobacterium tuberculosis hypothetical protein rv2303c rv2303c or mtcy339.06 or mt2360 SWALL:Q50662 (EMBL:Z77163) (307 aa) fasta scores: E(): 1.1e-13, 27.14% id in 291 aa
NP_891226.1	ortholog of Bordetella pertussis (BX470248) BP0617; Similar to Caulobacter crescentus transcriptional regulator, tetr family cc0992 SWALL:Q9A9I8 (EMBL:AE005777) (210 aa) fasta scores: E(): 2e-13, 34.07% id in 179 aa, and to Rhodococcus sp. NCIMB 9784 transcriptional repressor campR SWALL:Q93TU7 (EMBL:AF323755) (206 aa) fasta scores: E(): 3.3e-11, 25% id in 184 aa
NP_891227.1	ortholog of Bordetella pertussis (BX470248) BP0618; Similar to Escherichia coli, and Escherichia coli O157:H7 dihydrolipoamide dehydrogenase lpda or lpd or b0116 or z0126 or ecs0120 SWALL:DLDH_ECOLI (SWALL:P00391) (473 aa) fasta scores: E(): 1.4e-93, 56% id in 466 aa, and to Salmonella typhimurium lipoamide dehydrogenase lpda or stm0154 SWALL:Q8ZRT0 (EMBL:AE008701) (474 aa) fasta scores: E(): 1.9e-93, 55.46% id in 467 aa
NP_891228.1	ortholog of Bordetella pertussis (BX470248) BP0619; Similar to Thermotoga maritima branched chain amino acid ABC transporter ATP-binding protein tm1139 SWALL:Q9X0M3 (EMBL:AE001771) (239 aa) fasta scores: E(): 8.4e-29, 46.61% id in 236 aa, and to Anabaena sp. ATP-binding protein of branched-chain amino acid ABC transporter alr2541 SWALL:Q8YU20 (EMBL:AP003589) (264 aa) fasta scores: E(): 1.2e-28, 44.91% id in 236 aa
NP_891229.1	ortholog of Bordetella pertussis (BX470248) BP0620; Similar to Deinococcus radiodurans branched-chain amino acid ABC tranpsorter, ATP binding protein dra0261 SWALL:Q9RYP8 (EMBL:AE001863) (587 aa) fasta scores: E(): 1.1e-43, 33.85% id in 576 aa, and to Agrobacterium tumefaciens ABC transporter nucleotide binding/ATPase atu1411 or agr_c_2606 SWALL:Q8UFI6 (EMBL:AE009101) (595 aa) fasta scores: E(): 3e-43, 33.67% id in 579 aa
NP_891230.1	ortholog of Bordetella pertussis (BX470248) BP0621; Similar to Escherichia coli, and Escherichia coli O157:H7 high-affinity branched-chain amino acid transport system permease livh livh or b3457 or z4827 or ecs4304 SWALL:LIVH_ECOLI (SWALL:P08340) (308 aa) fasta scores: E(): 4.9e-23, 33.55% id in 304 aa, and to Streptococcus pneumoniae R6 ABC transporter membrane-spanning permease-branched chain amino acid transport livH SWALL:AAK99464 (EMBL:AE008443) (292 aa) fasta scores: E(): 1.1e-24, 30.87% id in 298 aa
NP_891231.1	ortholog of Bordetella pertussis (BX470248) BP0622; Similar to Escherichia coli leu/ile/val-binding protein precursor livj or b3460 SWALL:LIVJ_ECOLI (SWALL:P02917) (367 aa) fasta scores: E(): 9.2e-13, 28.42% id in 299 aa, and to Rhizobium meliloti probable leu/ile/val-binding protein livj or r00923 or smc00078 SWALL:Q92RF4 (EMBL:AL591785) (368 aa) fasta scores: E(): 1.5e-14, 32.86% id in 353 aa
NP_891232.1	ortholog of Bordetella pertussis (BX470248) BP0623; Similar to Pseudomonas aeruginosa hypothetical protein Pa0881 pa0881 SWALL:Q9I564 (EMBL:AE004522) (450 aa) fasta scores: E(): 1.2e-16, 26.83% id in 436 aa, and to Methanobacterium thermoautotrophicum conserved protein mth965 SWALL:O27046 (EMBL:AE000870) (452 aa) fasta scores: E(): 9.7e-16, 30.93% id in 375 aa
NP_891233.1	activates fatty acids by binding to coenzyme A
NP_891234.1	ortholog of Bordetella pertussis (BX470248) BP0625; Similar to Archaeoglobus fulgidus acyl-coa dehydrogenase af0964 SWALL:O29298 (EMBL:AE001038) (394 aa) fasta scores: E(): 1e-65, 45.31% id in 395 aa, and to Caulobacter crescentus acyl-coa dehydrogenase family protein cc2328 SWALL:Q9A5W9 (EMBL:AE005903) (387 aa) fasta scores: E(): 2.4e-56, 41.64% id in 389 aa
NP_891235.1	ortholog of Bordetella pertussis (BX470248) BP0626; Similar to Caulobacter crescentus 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase cc0340 SWALL:Q9AB91 (EMBL:AE005707) (402 aa) fasta scores: E(): 1.2e-29, 37.04% id in 413 aa, and to Pseudomonas aeruginosa dihydrolipoamide succinyltransferase SucB or pa1586 SWALL:Q9I3D2 (EMBL:AE004586) (409 aa) fasta scores: E(): 3.9e-29, 37.16% id in 409 aa
NP_891236.1	ortholog of Bordetella pertussis (BX470248) BP0627; Similar to Clostridium acetobutylicum 3-hydroxybutyryl-CoA dehydratase Crt or cac2712 SWALL:CRT_CLOAB (SWALL:P52046) (261 aa) fasta scores: E(): 1.8e-32, 39.76% id in 254 aa, and to Thermoanaerobacter tengcongensis enoyl-CoA hydratase/carnithine racemase CaiD or tte0544 SWALL:Q8RC92 (EMBL:AE013024) (260 aa) fasta scores: E(): 3.2e-35, 41.76% id in 261 aa
NP_891237.1	ortholog of Bordetella pertussis (BX470248) BP0628; Similar to Zea mays pyruvate dehydrogenase E1 beta subunit isoform 2 SWALL:Q9ZQY2 (EMBL:AF069909) (374 aa) fasta scores: E(): 1e-55, 46.76% id in 325 aa, and to Rhizobium loti acetoin dehydrogenase mll3628 SWALL:Q98FT4 (EMBL:AP003002) (332 aa) fasta scores: E(): 5.6e-59, 51.4% id in 321 aa
NP_891238.1	ortholog of Bordetella pertussis (BX470248) BP0629; Similar to Zymomonas mobilis pyruvate dehydrogenase E1 component, alpha subunit PdhA or PdhA alphA SWALL:ODPA_ZYMMO (SWALL:O66112) (354 aa) fasta scores: E(): 3.5e-41, 41.45% id in 316 aa, and to Pseudomonas aeruginosa probable dehydrogenase E1 component pa4150 SWALL:Q9HWN1 (EMBL:AE004831) (324 aa) fasta scores: E(): 6.1e-48, 45% id in 320 aa
NP_891239.1	ortholog of Bordetella pertussis (BX470248) BP0630; Similar to Pseudomonas aeruginosa probable transcriptional regulator pa1015 SWALL:Q9I4V8 (EMBL:AE004534) (266 aa) fasta scores: E(): 7e-31, 39.59% id in 245 aa, and to Pseudomonas abietaniphila DitR ditR SWALL:Q9X4X3 (EMBL:AF119621) (273 aa) fasta scores: E(): 3.8e-26, 35.8% id in 243 aa
NP_891240.1	ortholog of Bordetella pertussis (BX470248) BP0631; Similar to Rhodobacter capsulatus probable enoyl-CoA hydratase fadb1 SWALL:ECHH_RHOCA (SWALL:P24162) (257 aa) fasta scores: E(): 8.7e-10, 32.01% id in 253 aa, and to Agrobacterium tumefaciens enoyl-CoA hydratase atu3481 or agr_l_2700 SWALL:Q8UA93 (EMBL:AE009278) (280 aa) fasta scores: E(): 3.1e-11, 31.9% id in 210 aa
NP_891241.1	ortholog of Bordetella pertussis (BX470248) BP0632; Similar to Pseudomonas mendocina pimeloyl-CoA synthetase SWALL:Q9ZER2 (EMBL:AJ012480) (711 aa) fasta scores: E(): 2.5e-71, 36.86% id in 708 aa, and to Pseudomonas aeruginosa pimeloyl-CoA synthetase pa1017 SWALL:Q9I4V6 (EMBL:AE004534) (715 aa) fasta scores: E(): 5.8e-70, 35.95% id in 712 aa
NP_891242.1	ortholog of Bordetella pertussis (BX470248) BP0633; Similar to Comamonas testosteroni OrfJ protein orfJ SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 1.7e-41, 42.94% id in 319 aa, and to Rhizobium meliloti hypothetical protein ra1058 ra1058 or sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 5.9e-41, 40.42% id in 329 aa
NP_891243.1	ortholog of Bordetella pertussis (BX470248) BP0634; Similar to Bacillus subtilis acyl-coa dehydrogenase acda or acD SWALL:ACDA_BACSU (SWALL:P45867) (379 aa) fasta scores: E(): 2.5e-49, 41.11% id in 377 aa, and to Bacillus halodurans acyl-coa dehydrogenase acda or bh3798 SWALL:Q9K6D1 (EMBL:AP001520) (380 aa) fasta scores: E(): 2e-52, 41.53% id in 378 aa
NP_891244.1	ortholog of Bordetella pertussis (BX470248) BP0635; Similar to Escherichia coli probable enoyl-coa hydratase PaaG or b1394 SWALL:PAAG_ECOLI (SWALL:P77467) (262 aa) fasta scores: E(): 6.3e-25, 33.84% id in 260 aa, and to Rhizobium meliloti  enoyl-coa hydratase paag or rb1553 or smb21633 SWALL:Q92TG7 (EMBL:AL603647) (263 aa) fasta scores: E(): 2.7e-28, 39.53% id in 258 aa
NP_891245.1	ortholog of Bordetella pertussis (BX470248) BP0636; Similar to Pseudomonas aeruginosa hypothetical protein Pa1016 pa1016 SWALL:Q9I4V7 (EMBL:AE004534) (383 aa) fasta scores: E(): 2.5e-46, 41.68% id in 379 aa, and to Rhodococcus sp. NCIMB 9784 non-specific lipid carrier-like protein campC SWALL:Q93TU4 (EMBL:AF323755) (408 aa) fasta scores: E(): 5.2e-36, 35.1% id in 376 aa
NP_891246.1	ortholog of Bordetella pertussis (BX470248) BP0637; Similar to Thermoplasma volcanium hypothetical protein tv0134 tv0134 or tvg0142586 SWALL:Q97CG7 (EMBL:AP000991) (135 aa) fasta scores: E(): 1.4e-07, 36.52% id in 115 aa, and to Thermoplasma acidophilum hypothetical protein Ta1457 ta1457 SWALL:Q9HI85 (EMBL:AL445067) (135 aa) fasta scores: E(): 2.2e-07, 35.65% id in 115 aa
NP_891247.1	ortholog of Bordetella pertussis (BX470248) BP0638; no significant database matches
NP_891248.1	ortholog of Bordetella pertussis (BX470248) BP0639; Similar to Archaeoglobus fulgidus monoamine oxidase regulatory protein,  af0198 SWALL:O30041 (EMBL:AE001092) (146 aa) fasta scores: E(): 1.1e-06, 44.44% id in 90 aa, and to Aeromonas hydrophila enoyl-coa hydrotase phaJ SWALL:Q8RT81 (EMBL:AF468057) (134 aa) fasta scores: E(): 2.9e-06, 32.75% id in 116 aa
NP_891249.1	ortholog of Bordetella pertussis (BX470248) BP0640; Similar to Pseudomonas aeruginosa probable acyl-coa dehydrogenase pa2889 SWALL:Q9HZV8 (EMBL:AE004715) (386 aa) fasta scores: E(): 8.7e-87, 55.84% id in 385 aa, and to Caenorhabditis elegans probable isovaleryl-coa dehydrogenase c02d5.1 SWALL:IVD_CAEEL (SWALL:P34275) (408 aa) fasta scores: E(): 1.4e-71, 47.79% id in 385 aa
NP_891250.1	ortholog of Bordetella pertussis (BX470248) BP0641; Similar to Rhizobium meliloti hypothetical protein ra1058 ra1058 or sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 7.3e-41, 40.18% id in 321 aa, and to Comamonas testosteroni OrfJ protein orfJ SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 2.1e-37, 37.34% id in 324 aa
NP_891251.1	ortholog of Bordetella pertussis (BX470248) BP0642; Similar to Pseudomonas aeruginosa hypothetical protein Pa3592 pa3592 SWALL:Q9HY34 (EMBL:AE004779) (395 aa) fasta scores: E(): 2.6e-30, 35.56% id in 388 aa, and to Rhizobium loti hypothetical protein Mlr1614 mlr1614 SWALL:Q98K67 (EMBL:AP002997) (391 aa) fasta scores: E(): 3.8e-30, 34.61% id in 390 aa
NP_891252.1	ortholog of Bordetella pertussis (BX470248) BP0643; Similar to Xanthomonas axonopodis transcriptional regulator nocr or xac2276 SWALL:AAM37129 (EMBL:AE011865) (305 aa) fasta scores: E(): 2.9e-30, 36.94% id in 295 aa, and to Escherichia coli O157:H7 positive regulator for lys lysr or z4157 or ecs3696 SWALL:Q8X6J2 (EMBL:AE005512) (311 aa) fasta scores: E(): 4.4e-27, 34.93% id in 292 aa
NP_891253.1	ortholog of Bordetella pertussis (BX470248) BP0644; Similar to Agrobacterium tumefaciens dihydrodipicolinate synthase dapa or atu5457 or agr_pat_671 SWALL:Q8UJL9 (EMBL:AE008967) (302 aa) fasta scores: E(): 9.2e-20, 32.05% id in 287 aa, and to Thermotoga maritima dihydrodipicolinate synthase dapa or tm1521 SWALL:DAPA_THEMA (SWALL:Q9X1K9) (294 aa) fasta scores: E(): 6.4e-16, 28.8% id in 250 aa
NP_891254.1	Similar to Streptomyces coelicolor  transcriptional regulator sco6565 or sc4b5.15 SWALL:Q9ZBV3 (EMBL:AL034443) (225 aa) fasta scores: E(): 7.1e-12, 33% id in 203 aa, and to Thermoanaerobacter tengcongensis transcriptional regulator gntr or tte2558 SWALL:Q8R766 (EMBL:AE013196) (225 aa) fasta scores: E(): 8.2e-12, 27.8% id in 205 aa
NP_891255.1	Similar to Rhizobium meliloti aspartate aminotransferase a aata or r02325 or smc01578 SWALL:AATA_RHIME (SWALL:Q02635) (400 aa) fasta scores: E(): 4.6e-75, 51.64% id in 395 aa, and to Agrobacterium tumefaciens aspartate aminotransferase a aata or atu2196 or agr_c_3991 SWALL:Q8UDD1 (EMBL:AE009170) (400 aa) fasta scores: E(): 1.7e-75, 51.64% id in 395 aa
NP_891256.1	Similar to Bordetella pertussis hypothetical 59.5 kDa protein SWALL:O30443 (EMBL:AF006000) (568 aa) fasta scores: E(): 7.3e-32, 46.22% id in 225 aa, and to Bacillus subtilis hypothetical protein YcsJ ycsJ SWALL:YCSJ_BACSU (SWALL:P42967) (578 aa) fasta scores: E(): 3.5e-27, 38.42% id in 229 aa
NP_891257.1	Similar to Bacillus halodurans hypothetical protein Bh1818 bh1818 SWALL:Q9KBV6 (EMBL:AP001513) (331 aa) fasta scores: E(): 2.3e-44, 44.34% id in 318 aa, and to Ralstonia solanacearum hypothetical protein rsc2170 rsc2170 or rs01429 SWALL:Q8XXE4 (EMBL:AL646068) (353 aa) fasta scores: E(): 1.1e-31, 39.51% id in 329 aa
NP_891258.1	Similar to Bordetella pertussis hypothetical 26.3 kDa protein SWALL:O30444 (EMBL:AF006000) (252 aa) fasta scores: E(): 2.8e-54, 62.09% id in 248 aa, and to Staphylococcus aureus hypothetical protein sav1605 sav1605 or sa1433 SWALL:Q99TP4 (EMBL:AP003362) (250 aa) fasta scores: E(): 2.3e-42, 48.38% id in 248 aa
NP_891259.1	Similar to Rhizobium meliloti probable extracellular substrate-binding protein, family 5 ra1133 or sma2075 SWALL:Q92XV7 (EMBL:AE007299) (543 aa) fasta scores: E(): 3.5e-61, 36.39% id in 544 aa, and to Agrobacterium tumefaciens ABC transporter substrate-binding protein atu3433 or agr_l_2786 SWALL:Q8UAE1 (EMBL:AE009273) (585 aa) fasta scores: E(): 1.5e-65, 36.86% id in 529 aa
NP_891260.1	Similar to Rhizobium meliloti probable ABC transporter permease ra1138 or sma2085 SWALL:Q92XV2 (EMBL:AE007299) (328 aa) fasta scores: E(): 2.2e-54, 47.93% id in 315 aa, and to Agrobacterium tumefaciens ABC transporter membrane spanning protein atu3434 or agr_l_2785 SWALL:Q8UAE0 (EMBL:AE009274) (347 aa) fasta scores: E(): 9.4e-54, 47.96% id in 319 aa
NP_891261.1	Similar to Rhizobium loti ABC transporter permease mlr3399 SWALL:Q98GB9 (EMBL:AP003001) (276 aa) fasta scores: E(): 1.4e-42, 45.8% id in 262 aa, and to Brucella melitensis oligopeptide transport system permease oppc bmeii0506 SWALL:Q8YCM2 (EMBL:AE009686) (276 aa) fasta scores: E(): 4.9e-42, 45.31% id in 267 aa
NP_891262.1	Similar to Agrobacterium tumefaciens ABC transporter nucleotide binding/ATPase atu3053 or agr_l_3504 SWALL:Q8UBG3 (EMBL:AE009236) (575 aa) fasta scores: E(): 1.8e-114, 61.32% id in 543 aa, and to Rhizobium meliloti  oligopeptide ABC transporter ATP-binding protein rb0111 or smb20111 SWALL:Q92X51 (EMBL:AL603642) (546 aa) fasta scores: E(): 2e-83, 49.17% id in 543 aa
NP_891263.1	allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide
NP_891264.1	Similar to Pyrococcus abyssi phosphoglycerate dehydrogenase SerA-like or pab0514 SWALL:Q9V0M8 (EMBL:AJ248285) (307 aa) fasta scores: E(): 1e-35, 41.77% id in 304 aa, and to Pyrococcus furiosus phosphoglycerate dehydrogenase pf1394 SWALL:Q8U135 (EMBL:AE010242) (306 aa) fasta scores: E(): 2.4e-35, 42.05% id in 302 aa
NP_891265.1	Similar to Pseudomonas putida N-formylglutamate amidohydrolase hutG SWALL:O31201 (EMBL:AF032970) (267 aa) fasta scores: E(): 8e-45, 47.67% id in 258 aa, and to Pseudomonas aeruginosa N-formylglutamate amidohydrolase hutg or pa5091 SWALL:Q9HU92 (EMBL:AE004922) (266 aa) fasta scores: E(): 1.6e-44, 50.19% id in 259 aa
NP_891266.1	Similar to Pseudomonas aeruginosa biotin carboxyl carrier protein of acetyl-coa carboxylase accb or fabe or pa4847 SWALL:BCCP_PSEAE (SWALL:P37799) (156 aa) fasta scores: E(): 0.026, 27.74% id in 155 aa, and to Ralstonia solanacearum probable biotin carboxyl carrier protein of acetyl-coa carboxylase accb1 or rsc2786 or rs00061 SWALL:Q8XVP4 (EMBL:AL646071) (155 aa) fasta scores: E(): 0.025, 32.68% id in 153 aa
NP_891267.1	Similar to Bacillus subtilis biotin carboxyl carrier protein of acetyl-coa carboxylase accb or fabE SWALL:BCCP_BACSU (SWALL:P49786) (159 aa) fasta scores: E(): 5.7e-08, 36.29% id in 124 aa, and to Yersinia pestis biotin carboxyl carrier protein of acetyl-coa carboxylase accb or ypo3659 SWALL:Q8ZAX2 (EMBL:AJ414158) (154 aa) fasta scores: E(): 5.5e-08, 34.43% id in 151 aa
NP_891268.1	Similar to Escherichia coli biotin carboxylase accc or fabg or b3256 SWALL:ACCC_ECOLI (SWALL:P24182) (449 aa) fasta scores: E(): 1.4e-104, 61.67% id in 441 aa, and to Pseudomonas aeruginosa biotin carboxylase accc or fabg or pa4848 SWALL:ACCC_PSEAE (SWALL:P37798) (449 aa) fasta scores: E(): 1.5e-106, 62.13% id in 441 aa
NP_891269.1	catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate
NP_891270.1	Similar to Myxococcus xanthus DfrA protein dfrA SWALL:DFRA_MYXXA (SWALL:O52178) (131 aa) fasta scores: E(): 1.8e-10, 39.2% id in 125 aa, and to Xanthomonas campestris translation initiation inhibitor yjgf or xcc3239 SWALL:AAM42509 (EMBL:AE012441) (126 aa) fasta scores: E(): 3.3e-12, 45.96% id in 124 aa
NP_891271.1	catalyzes the formation of selenophosphate from selenide and ATP
NP_891272.1	catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
NP_891273.1	Similar to Xanthomonas axonopodis hypothetical protein Xac0269 xac0269 SWALL:AAM35161 (EMBL:AE011652) (111 aa) fasta scores: E(): 5e-05, 40.19% id in 102 aa, and to Pseudomonas aeruginosa hypothetical protein Pa0802 pa0802 SWALL:Q9I5D6 (EMBL:AE004515) (107 aa) fasta scores: E(): 0.018, 36.44% id in 107 aa
NP_891274.1	Similar to Xanthomonas campestris hypothetical protein Xcc3596 xcc3596 SWALL:AAM42866 (EMBL:AE012480) (540 aa) fasta scores: E(): 1.1e-55, 38.67% id in 530 aa, and to Xanthomonas campestris hypothetical protein Xcc0251 xcc0251 SWALL:AAM39570 (EMBL:AE012121) (538 aa) fasta scores: E(): 8.8e-47, 41.62% id in 543 aa
NP_891275.1	Pteviously sequenced as Bordetella bronchiseptica ECF sigma factor BupI SWALL:Q9L430 (EMBL:AJ251793) (177 aa) fasta scores: E(): 8.6e-67, 100% id in 177 aa
NP_891276.1	Previously sequenced as Bordetella bronchiseptica inner membrane sensor BupR SWALL:Q9L429 (EMBL:AJ251793) (344 aa) fasta scores: E(): 1.5e-131, 99.41% id in 344 aa
NP_891277.1	Previously sequenced as Bordetella bronchiseptica siderophore receptor precursor bfrZ SWALL:Q9L428 (EMBL:AJ251793) (860 aa) fasta scores: E(): 0, 100% id in 860 aa
NP_891278.1	Similar to Sphingomonas aromaticivorans hypothetical 14.5 kDa protein orf151 SWALL:O85848 (EMBL:AF079317) (137 aa) fasta scores: E(): 1.2e-16, 42.73% id in 117 aa, and to Caulobacter crescentus hypothetical protein Cc3645 cc3645 SWALL:Q9A2C0 (EMBL:AE006023) (187 aa) fasta scores: E(): 4.5e-08, 31.2% id in 141 aa
NP_891279.1	Similar to Caulobacter crescentus hypothetical protein Cc1841 cc1841 SWALL:Q9A785 (EMBL:AE005858) (375 aa) fasta scores: E(): 5.7e-73, 56.19% id in 363 aa, and to Mycobacterium tuberculosis hypothetical 38.7 kDa protein mcr or rv1143 or mt1176 or mtci65.10 SWALL:O06543 (EMBL:Z95584) (395 aa) fasta scores: E(): 1e-67, 50.96% id in 363 aa
NP_891280.1	Similar to Bacillus halodurans transcriptional regulator bh2137 SWALL:Q9KAZ9 (EMBL:AP001514) (251 aa) fasta scores: E(): 5.4e-17, 30.48% id in 246 aa, and to Streptomyces coelicolor  iclr-family transcriptional regulatory protein sco4989 or 2sck36.12 SWALL:Q93JK5 (EMBL:AL591857) (254 aa) fasta scores: E(): 1.4e-12, 29.91% id in 244 aa
NP_891281.1	Similar to Xylella fastidiosa hypothetical protein Xf0451 xf0451 SWALL:Q9PG51 (EMBL:AE003895) (363 aa) fasta scores: E(): 3.4e-41, 41.69% id in 331 aa, and to Pseudomonas aeruginosa probable oxidoreductase pa1833 SWALL:Q9I2R2 (EMBL:AE004609) (330 aa) fasta scores: E(): 2.1e-39, 43.37% id in 302 aa
NP_891282.1	Similar to Agrobacterium tumefaciens hypothetical protein atu4727 atu4727 or agr_l_312 SWALL:Q8U6S9 (EMBL:AE009401) (329 aa) fasta scores: E(): 1.4e-38, 39.27% id in 331 aa, and to Comamonas testosteroni Orf4 protein orf4 SWALL:Q9S155 (EMBL:AB024335) (325 aa) fasta scores: E(): 2e-37, 39.25% id in 321 aa
NP_891283.1	Similar to Rhodopseudomonas palustris 2-hydroxycyclohexanecarboxyl-coa dehyrogenase badH SWALL:O07457 (EMBL:U75363) (255 aa) fasta scores: E(): 5.2e-53, 58.82% id in 255 aa, and to Thauera aromatica alcohol dehydrogenase SWALL:Q9AJT2 (EMBL:AJ278289) (249 aa) fasta scores: E(): 4.6e-39, 49.8% id in 253 aa
NP_891284.1	Similar to Sulfolobus tokodaii hypothetical protein St0068 st0068 SWALL:Q976X1 (EMBL:AP000981) (165 aa) fasta scores: E(): 1.3e-10, 36.36% id in 154 aa, and to Sulfolobus solfataricus regulatory protein,  sso3136 SWALL:Q97U86 (EMBL:AE006904) (161 aa) fasta scores: E(): 2.5e-09, 34.41% id in 154 aa
NP_891285.1	Similar to Bacillus subtilis acyl-CoA dehydrogenase MmgC SWALL:ACDB_BACSU (SWALL:P45857) (379 aa) fasta scores: E(): 5e-56, 44.15% id in 385 aa, and to Mycobacterium leprae probable acyl-CoA dehydrogenase fadE25 or Acd or ml0737 or b1308_f1_34 SWALL:ACDP_MYCLE (SWALL:P46703) (389 aa) fasta scores: E(): 1.7e-54, 41.99% id in 381 aa
NP_891286.1	Similar to Ralstonia solanacearum  transmembrane protein rsc0796 or rs05041 SWALL:Q8Y194 (EMBL:AL646061) (420 aa) fasta scores: E(): 6.4e-89, 56.54% id in 405 aa, and to Pseudomonas aeruginosa hypothetical protein Pa0446 pa0446 SWALL:Q9I672 (EMBL:AE004482) (407 aa) fasta scores: E(): 1.9e-86, 53.07% id in 407 aa
NP_891287.1	Similar to Variovorax paradoxus, and Burkholderia cepacia 2,4-diphenoxyacetic acid gene cluster SWALL:Q9RHQ7 (EMBL:AB028643) (337 aa) fasta scores: E(): 2.7e-39, 40.26% id in 303 aa, and to Pseudomonas putida, and Pseudomonas sp. hypothetical 34.5 kDa protein in clcb-clcd intergenic region precursor SWALL:YCLC_PSEPU (SWALL:Q47100) (329 aa) fasta scores: E(): 1.3e-36, 40.85% id in 306 aa
NP_891288.1	Similar to Clostridium beijerinckii crotonase Crt SWALL:Q8RMI7 (EMBL:AF494018) (261 aa) fasta scores: E(): 3.3e-35, 43.56% id in 241 aa, and to Thermoanaerobacter tengcongensis enoyl-CoA hydratase/carnithine racemase caid or tte0544 SWALL:Q8RC92 (EMBL:AE013024) (260 aa) fasta scores: E(): 1.1e-37, 45.34% id in 247 aa
NP_891289.1	Similar to Escherichia coli 2,4-dienoyl-CoA reductase [NADPH] fadh or b3081 SWALL:FADH_ECOLI (SWALL:P42593) (671 aa) fasta scores: E(): 6.2e-116, 50.07% id in 671 aa, and to Streptomyces coelicolor 2,4-dienoyl-CoA reductase fadh or sco7066 or sc4g1.32 SWALL:Q9FC18 (EMBL:AL391039) (671 aa) fasta scores: E(): 4.4e-123, 52.37% id in 674 aa
NP_891290.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
NP_891291.1	Similar to Rhodopseudomonas palustris transcriptional activatory protein BadR badR SWALL:BADR_RHOPA (SWALL:O07458) (175 aa) fasta scores: E(): 2.5e-20, 43.26% id in 141 aa, and to Escherichia coli homoprotocatechuate degradative operon repressor hpcr or hpaR SWALL:HPCR_ECOLI (SWALL:Q07095) (148 aa) fasta scores: E(): 1.9e-05, 29.63% id in 135 aa
NP_891292.1	Similar to Bradyrhizobium japonicum electron transfer flavoprotein beta-subunit etfb or etfS SWALL:ETFB_BRAJA (SWALL:P53575) (249 aa) fasta scores: E(): 4.9e-58, 68.27% id in 249 aa, and to Paracoccus denitrificans electron transfer flavoprotein beta-subunit etfB SWALL:ETFB_PARDE (SWALL:P38975) (252 aa) fasta scores: E(): 1.3e-54, 64.82% id in 253 aa
NP_891293.1	Similar to Bradyrhizobium japonicum electron transfer flavoprotein alpha-subunit etfa or etfL SWALL:ETFA_BRAJA (SWALL:P53573) (314 aa) fasta scores: E(): 8e-64, 68.38% id in 310 aa, and to Paracoccus denitrificans electron transfer flavoprotein alpha-subunit etfA SWALL:ETFA_PARDE (SWALL:P38974) (307 aa) fasta scores: E(): 5.4e-59, 65.14% id in 307 aa
NP_891294.1	Previously sequenced as Bordetella bronchiseptica exogenous ferric siderophore receptor BfrA SWALL:P70847 (EMBL:U56084) (754 aa) fasta scores: E(): 0, 100% id in 754 aa
NP_891295.1	Similar to Comamonas testosteroni OrfJ protein orfJ SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 1.7e-37, 35.91% id in 323 aa, and to Bordetella pertussis hypothetical 34.9 kDa protein in brg1 3'region precursor SWALL:YBR5_BORPE (SWALL:O30446) (323 aa) fasta scores: E(): 2.2e-37, 39.31% id in 323 aa
NP_891296.1	Similar to Archaeoglobus fulgidus maoc protein af2313 SWALL:O27971 (EMBL:AE000944) (151 aa) fasta scores: E(): 3.9e-12, 36.73% id in 147 aa, and to Sulfolobus tokodaii hypothetical protein St0068 st0068 SWALL:Q976X1 (EMBL:AP000981) (165 aa) fasta scores: E(): 1.2e-10, 32.9% id in 155 aa
NP_891297.1	Similar to Bacillus subtilis 3-oxoacyl-ACP reductase fabG SWALL:FABG_BACSU (SWALL:P51831) (246 aa) fasta scores: E(): 9.3e-32, 44.53% id in 247 aa, and to Sulfolobus tokodaii  3-oxoacyl-ACP reductase st1109 SWALL:Q972M3 (EMBL:AP000985) (250 aa) fasta scores: E(): 3.6e-35, 46.18% id in 249 aa
NP_891298.1	Similar to Thermoplasma volcanium L-carnitine dehydratase tv1186 or tvg1215416 SWALL:Q979H5 (EMBL:AP000995) (399 aa) fasta scores: E(): 1e-56, 38.88% id in 396 aa, and to Pseudomonas aeruginosa hypothetical protein Pa3592 pa3592 SWALL:Q9HY34 (EMBL:AE004779) (395 aa) fasta scores: E(): 1.2e-50, 36.64% id in 393 aa
NP_891299.1	Similar to Methanosarcina mazei beta-ketoacyl synthase/thiolase mm0870 SWALL:AAM30566 (EMBL:AE013312) (390 aa) fasta scores: E(): 1.6e-31, 37.7% id in 419 aa, and to Methanosarcina acetivorans acetyl-coa c-acyltransferase ma4042 SWALL:Q8TIU9 (EMBL:AE011116) (390 aa) fasta scores: E(): 1.2e-30, 35.73% id in 403 aa
NP_891300.1	Similar to Pseudomonas aeruginosa (R)-specific enoyl-CoA hydratase PhaJ2 or pa1018 SWALL:Q9LBK1 (EMBL:AB040026) (288 aa) fasta scores: E(): 2.7e-50, 50.69% id in 286 aa, and to Mycobacterium tuberculosis maoc family protein rv3389c or mtv004.47c or mt3496 SWALL:Q11198 (EMBL:U27357) (290 aa) fasta scores: E(): 4.4e-34, 43.49% id in 292 aa
NP_891301.1	Similar to Mycobacterium tuberculosis fatty acid-CoA racemase far or rv0855 or mtv043.48 or mt0878 SWALL:O53867 (EMBL:AL022004) (359 aa) fasta scores: E(): 4.8e-55, 44.56% id in 359 aa, and to Streptomyces coelicolor  racemase sco6730 or sc5f2a.13 SWALL:Q9X7N6 (EMBL:AL049587) (398 aa) fasta scores: E(): 1.6e-66, 50.27% id in 368 aa
NP_891302.1	Similar to Brucella melitensis transcriptional regulator bmeii1022 SWALL:Q8YB78 (EMBL:AE009735) (284 aa) fasta scores: E(): 4.8e-34, 38.6% id in 272 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa1630 SWALL:Q9I392 (EMBL:AE004590) (288 aa) fasta scores: E(): 7.7e-34, 37.41% id in 286 aa
NP_891303.1	Similar to Rhodococcus globerulus biphenyl-2,3-diol 1,2-dioxygenase III BphC3 SWALL:BHC3_RHOGO (SWALL:P47233) (189 aa) fasta scores: E(): 6.1e-06, 36% id in 125 aa, and to Rhizobium meliloti hypothetical protein r00986 or smc00115 SWALL:Q92RA9 (EMBL:AL591785) (296 aa) fasta scores: E(): 3.7e-05, 24.46% id in 233 aa
NP_891304.1	Similar to Escherichia coli 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase MhpC or b0349 SWALL:MHPC_ECOLI (SWALL:P77044) (293 aa) fasta scores: E(): 1.4e-17, 30.07% id in 276 aa, and to Rhodococcus sp. RHA1 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase BphD2 SWALL:Q9KWQ6 (EMBL:AB030672) (292 aa) fasta scores: E(): 2.8e-19, 36.6% id in 265 aa
NP_891305.1	Similar to Pseudomonas sp. vanillate O-demethylase oxidoreductase VanB SWALL:VANB_PSESP (SWALL:O05617) (317 aa) fasta scores: E(): 5.7e-59, 53.07% id in 309 aa, and to Acinetobacter calcoaceticus vanillate O-demethylase oxidoreductase vanB SWALL:VANB_ACICA (SWALL:O24840) (318 aa) fasta scores: E(): 6.2e-45, 42.76% id in 311 aa
NP_891306.1	Similar to Comamonas testosteroni 3-chlorobenzoate-3,4-dioxygenase oxygenase subunit CbaA SWALL:CBAA_COMTE (SWALL:Q44256) (432 aa) fasta scores: E(): 1.1e-49, 38.67% id in 393 aa, and to Pseudomonas putida phthalate 4,5-dioxygenase oxygenase subunit Pht3 SWALL:PHT3_PSEPU (SWALL:Q05183) (439 aa) fasta scores: E(): 6.1e-39, 37.94% id in 398 aa
NP_891307.1	Similar to Serratia marcescens iron(III)-binding periplasmic protein precursor SfuA SWALL:SFUA_SERMA (SWALL:P21408) (338 aa) fasta scores: E(): 0.044, 25.51% id in 243 aa, and to Anabaena sp. ferric iron-binding periplasmic protein of ABC transporter alr1382 SWALL:Q8YX36 (EMBL:AP003585) (336 aa) fasta scores: E(): 0.01, 21.8% id in 321 aa
NP_891308.1	Similar to Fusobacterium nucleatum iron(III)-transport system permease fn0309 SWALL:Q8RGI4 (EMBL:AE010543) (560 aa) fasta scores: E(): 2.1e-29, 24.59% id in 553 aa, and to Pasteurella multocida afub afub_2 or pm1455 SWALL:Q9CKZ5 (EMBL:AE006182) (564 aa) fasta scores: E(): 4.1e-33, 26.01% id in 569 aa
NP_891309.1	Similar to Vibrio cholerae iron vc0610 SWALL:Q9KUB3 (EMBL:AE004146) (343 aa) fasta scores: E(): 5.2e-32, 36.61% id in 355 aa, and to Ralstonia solanacearum probable ATP-binding ABC transporter protein rsc2939 or rs00150 SWALL:Q8XV92 (EMBL:AL646072) (358 aa) fasta scores: E(): 7.1e-39, 41.64% id in 365 aa
NP_891310.1	Similar to Burkholderia cepacia phthalate dihydrodiol dehydrogenase OphB SWALL:Q9ZFQ6 (EMBL:AF095748) (391 aa) fasta scores: E(): 5.6e-59, 42.3% id in 390 aa, and to Pseudomonas putida 4,5,-dihydroxyphthalate dehydrogenase Pht4 SWALL:PHT4_PSEPU (SWALL:Q05184) (410 aa) fasta scores: E(): 1.6e-56, 43.14% id in 394 aa
NP_891311.1	Similar to Arthrobacter keyseri oxalocitramalate aldolase pcmE SWALL:Q9AGL6 (EMBL:AF331043) (230 aa) fasta scores: E(): 5.9e-10, 34.41% id in 154 aa, and to Rhizobium meliloti hypothetical protein r01765 r01765 or smc00502 SWALL:Q92PI8 (EMBL:AL591788) (224 aa) fasta scores: E(): 7.7e-10, 39.49% id in 119 aa
NP_891312.1	no significant database matches
NP_891313.1	Similar to Agrobacterium tumefaciens NAD/NADP dependent oxidoreductase atu0990 or agr_c_1817 SWALL:Q8UGP5 (EMBL:AE009064) (293 aa) fasta scores: E(): 4.8e-36, 49.02% id in 257 aa, and to Rhizobium meliloti oxidoreductase r00362 or smc01157 SWALL:Q92SK9 (EMBL:AL591783) (259 aa) fasta scores: E(): 4.4e-34, 45.91% id in 257 aa
NP_891314.1	catalyzes the formation of L-aspartate to iminoaspartate in NAD(+) biosynthesis
NP_891315.1	Similar to Escherichia coli, and Escherichia coli O157:H7 glycine cleavage system transcriptional activator gcva or b2808 or z4125 or ecs3668 SWALL:GCVA_ECOLI (SWALL:P32064) (305 aa) fasta scores: E(): 8.6e-20, 35.83% id in 307 aa, and to Salmonella typhimurium, and Salmonella typhi regulator of gcv operon gcva or stm2982 or sty3122 SWALL:Q8XEJ8 (EMBL:AE008836) (305 aa) fasta scores: E(): 4.9e-19, 35.17% id in 307 aa
NP_891316.1	ortholog of Bordetella pertussis (BX470248) BP0647; Similar to Pyrococcus abyssi hypothetical protein Pab1062 pab1062 SWALL:Q9UY93 (EMBL:AJ248288) (130 aa) fasta scores: E(): 4.2e-09, 30.32% id in 122 aa, and to Pyrococcus horikoshii hypothetical 14.0 kDa protein Ph0353 ph0353 SWALL:Y353_PYRHO (SWALL:O58091) (134 aa) fasta scores: E(): 2.2e-08, 31.4% id in 121 aa
NP_891317.1	ortholog of Bordetella pertussis (BX470248) BP0648; Similar to Rhizobium loti hypothetical protein Mll1737 mll1737 SWALL:Q98JX4 (EMBL:AP002998) (416 aa) fasta scores: E(): 6.6e-31, 29.69% id in 421 aa, and to Methanococcus jannaschii hypothetical protein Mj1313 mj1313 SWALL:Q58709 (EMBL:U67571) (403 aa) fasta scores: E(): 2e-30, 27.94% id in 390 aa
NP_891318.1	ortholog of Bordetella pertussis (BX470248) BP0649; Similar to Rhizobium meliloti hypothetical protein ra1058 ra1058 or sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 2.2e-43, 43.16% id in 322 aa, and to Agrobacterium tumefaciens hypothetical protein atu4727 atu4727 or agr_l_312 SWALL:Q8U6S9 (EMBL:AE009401) (329 aa) fasta scores: E(): 8.3e-43, 41.66% id in 324 aa
NP_891319.1	ortholog of Bordetella pertussis (BX470248) BP0650; Similar to Pseudomonas aeruginosa probable transcriptional regulator pa2206 SWALL:Q9I1R1 (EMBL:AE004647) (315 aa) fasta scores: E(): 9.7e-28, 32.46% id in 308 aa, and to Xanthomonas campestris galactose-binding protein regulator gbpr or xcc1748 SWALL:AAM41039 (EMBL:AE012276) (323 aa) fasta scores: E(): 2.3e-25, 31.84% id in 314 aa
NP_891320.1	component of the membrane-bound D-lactate oxidase, FAD-binding, NADH independent
NP_891321.1	ortholog of Bordetella pertussis (BX470248) BP0652; Similar to Ralstonia solanacearum  acyl-coa dehydrogenase oxidoreductase rsc2044 or rs03609 SWALL:Q8XXR9 (EMBL:AL646068) (376 aa) fasta scores: E(): 1.2e-50, 47.07% id in 376 aa, and to Caulobacter crescentus acyl-coa dehydrogenase family protein cc1311 SWALL:Q9A8P2 (EMBL:AE005806) (401 aa) fasta scores: E(): 9.5e-46, 40.47% id in 378 aa
NP_891322.1	ortholog of Bordetella pertussis (BX470248) BP0653; Similar to Ralstonia solanacearum  acyl-coa dehydrogenase oxidoreductase rsc2045 or rs03610 SWALL:Q8XXR8 (EMBL:AL646068) (398 aa) fasta scores: E(): 9.8e-96, 58.14% id in 399 aa, and to Caulobacter crescentus acyl-coa dehydrogenase family protein cc1310 SWALL:Q9A8P3 (EMBL:AE005806) (404 aa) fasta scores: E(): 2.4e-81, 50.49% id in 404 aa
NP_891323.1	ortholog of Bordetella pertussis (BX470248) BP0654; Similar to Comamonas testosteroni OrfJ protein orfJ SWALL:Q9RHM9 (EMBL:AB029044) (326 aa) fasta scores: E(): 4.1e-37, 37.42% id in 326 aa, and to Rhizobium meliloti hypothetical protein ra1058 ra1058 or sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 1.2e-34, 36.01% id in 311 aa
NP_891324.1	catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine
NP_891325.1	ortholog of Bordetella pertussis (BX470248) BP0656; Similar to Pseudomonas aeruginosa hypothetical protein Pa5391 pa5391 SWALL:Q9HTH3 (EMBL:AE004951) (224 aa) fasta scores: E(): 4.7e-54, 68.3% id in 224 aa, and to Aeropyrum pernix hypothetical protein Ape1388 ape1388 SWALL:Q9YC63 (EMBL:AP000061) (301 aa) fasta scores: E(): 3.6e-18, 42.77% id in 166 aa
NP_891326.1	ortholog of Bordetella pertussis (BX470248) BP0657; Similar to Pseudomonas aeruginosa hypothetical protein Pa5392 pa5392 SWALL:Q9HTH2 (EMBL:AE004951) (140 aa) fasta scores: E(): 7.3e-50, 93.52% id in 139 aa, and to Corynebacterium glutamicum  translation initiation inhibitor cgl0152 SWALL:BAB97545 (EMBL:AP005274) (135 aa) fasta scores: E(): 1.2e-09, 40.36% id in 109 aa
NP_891327.1	ortholog of Bordetella pertussis (BX470248) BP0658; Similar to Pseudomonas aeruginosa hypothetical protein Pa5393 pa5393 SWALL:Q9HTH1 (EMBL:AE004951) (450 aa) fasta scores: E(): 3.4e-128, 75.96% id in 416 aa, and to Synechocystis sp. hypothetical protein Slr0801 slr0801 SWALL:Q55951 (EMBL:D64005) (416 aa) fasta scores: E(): 6.2e-54, 40.59% id in 404 aa
NP_891328.1	ortholog of Bordetella pertussis (BX470248) BP0659; Similar to Ralstonia solanacearum  oxidoreductase rsc2891 or rs00208 SWALL:Q8XVE0 (EMBL:AL646072) (338 aa) fasta scores: E(): 3e-76, 66.56% id in 332 aa, and to Rhizobium loti dehydrogenase, zinc-binding alcohol dehydrogenase, NADPH quinone oxidoreductase, oxidoreductase mlr3212 SWALL:Q98GR0 (EMBL:AP003001) (329 aa) fasta scores: E(): 2.9e-70, 60.06% id in 323 aa
NP_891329.1	ortholog of Bordetella pertussis (BX470248) BP0660; Similar to Pseudomonas aeruginosa probable transcriptional regulator pa0218 SWALL:Q9I6S0 (EMBL:AE004459) (306 aa) fasta scores: E(): 2.3e-27, 32.88% id in 298 aa, and to Rhizobium loti transcriptional regulator mll7443 SWALL:Q986A7 (EMBL:AP003011) (303 aa) fasta scores: E(): 4.9e-21, 29.09% id in 299 aa
NP_891330.1	ortholog of Bordetella pertussis (BX470248) BP0661; Similar to Entamoeba histolytica acetyl-CoA synthetase SWALL:Q9NAT4 (EMBL:AF286346) (713 aa) fasta scores: E(): 1.4e-56, 32.46% id in 687 aa, and to Pseudomonas paucimobilis feruloyl-CoA synthetase ferA SWALL:Q8RR27 (EMBL:AB072376) (709 aa) fasta scores: E(): 1.2e-65, 35.7% id in 703 aa
NP_891331.1	ortholog of Bordetella pertussis (BX470248) BP0662; Similar to Clostridium perfringens 3-hydroxybutryl-CoA dehydratase Crt or cpe2301 SWALL:Q8XI23 (EMBL:AP003193) (260 aa) fasta scores: E(): 2.2e-26, 35.06% id in 251 aa, and to Xanthomonas axonopodis 3-hydroxybutyryl-CoA dehydratase Crt or xac1584 SWALL:AAM36452 (EMBL:AE011790) (260 aa) fasta scores: E(): 3.3e-27, 37.5% id in 256 aa
NP_891332.1	ortholog of Bordetella pertussis (BX470248) BP0663; Similar to Thermoanaerobacter tengcongensis ABC-type nitrate/sulfonate/taurine/bicarbonate transport systems, periplasmic components taua or tte0643 SWALL:Q8RC09 (EMBL:AE013032) (336 aa) fasta scores: E(): 1.4e-15, 25.25% id in 297 aa, and to Clostridium acetobutylicum ABC transporter periplasmic-binding,  cac0620 SWALL:Q97LE2 (EMBL:AE007577) (338 aa) fasta scores: E(): 1.6e-08, 22.46% id in 276 aa
NP_891333.1	ortholog of Bordetella pertussis (BX470248) BP0664; Similar to Agrobacterium tumefaciens hypothetical protein atu4727 atu4727 or agr_l_312 SWALL:Q8U6S9 (EMBL:AE009401) (329 aa) fasta scores: E(): 1.9e-44, 40.72% id in 329 aa, and to Rhizobium meliloti hypothetical protein ra1058 ra1058 or sma1927 SWALL:Q92Y30 (EMBL:AE007292) (330 aa) fasta scores: E(): 2.5e-44, 40.06% id in 322 aa
NP_891334.1	ortholog of Bordetella pertussis (BX470248) BP0665; Similar to Saccharopolyspora erythraea thymidine diphosphoglucose 4,6-dehydratase gdH SWALL:Q54116 (EMBL:L37354) (329 aa) fasta scores: E(): 7.1e-13, 26.52% id in 328 aa, and to Streptomyces tenebrarius apre SWALL:Q9F5R6 (EMBL:AF306787) (332 aa) fasta scores: E(): 9.4e-13, 29.42% id in 333 aa
NP_891335.1	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
NP_891336.1	ortholog of Bordetella pertussis (BX470248) BP0667
NP_891337.1	ortholog of Bordetella pertussis (BX470248) BP0668
NP_891338.1	ortholog of Bordetella pertussis (BX470248) BP0669
NP_891339.1	ortholog of Bordetella pertussis (BX470248) BP0670
NP_891340.1	ortholog of Bordetella pertussis (BX470248) BP0671
NP_891341.1	ortholog of Bordetella pertussis (BX470248) BP0672
NP_891342.1	Catalyzes the first step in the citric acid cycle. Oxaloacetate and acetyl-CoA bind to citrate synthase, which then catalyzes the reaction which joins the two compounds together
NP_891343.1	ortholog of Bordetella pertussis (BX470248) BP0674
NP_891344.1	ortholog of Bordetella pertussis (BX470248) BP0675
NP_891347.1	ortholog of Bordetella pertussis (BX470248) BP3727
NP_891348.1	ortholog of Bordetella pertussis (BX470248) BP3728
NP_891349.1	ortholog of Bordetella pertussis (BX470248) BP3729
NP_891350.1	ortholog of Bordetella pertussis (BX470248) BP3730
NP_891351.1	ortholog of Bordetella pertussis (BX470248) BP3731
NP_891352.1	ortholog of Bordetella pertussis (BX470248) BP3732
NP_891353.1	ortholog of Bordetella pertussis (BX470248) BP3733
NP_891354.1	ortholog of Bordetella pertussis (BX470248) BP3734
NP_891355.1	converts protoheme IX and farnesyl diphosphate to heme O
NP_891356.1	ortholog of Bordetella pertussis (BX470248) BP3736
NP_891357.1	ortholog of Bordetella pertussis (BX470248) BP3737
NP_891358.1	ortholog of Bordetella pertussis (BX470248) BP3738
NP_891359.1	ortholog of Bordetella pertussis (BX470248) BP3739
NP_891360.1	ortholog of Bordetella pertussis (BX470248) BP3740
NP_891361.1	ortholog of Bordetella pertussis (BX470248) BP3741
NP_891362.1	ortholog of Bordetella pertussis (BX470248) BP3742
NP_891363.1	ortholog of Bordetella pertussis (BX470248) BP3743
NP_891364.1	ortholog of Bordetella pertussis (BX470248) BP3744
NP_891365.1	ortholog of Bordetella pertussis (BX470248) BP3745
NP_891366.1	ortholog of Bordetella pertussis (BX470248) BP3746
NP_891367.1	ortholog of Bordetella pertussis (BX470248) BP3747
NP_891368.1	binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters
NP_891369.1	ortholog of Bordetella pertussis (BX470248) BP3749
NP_891370.1	ortholog of Bordetella pertussis (BX470248) BP3750
NP_891371.1	ortholog of Bordetella pertussis (BX470248) BP3751
NP_891372.1	ortholog of Bordetella pertussis (BX470248) BP3752
NP_891373.1	ortholog of Bordetella pertussis (BX470248) BP3753
NP_891374.2	glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate
NP_891375.1	ortholog of Bordetella pertussis (BX470248) BP3755
NP_891376.1	ortholog of Bordetella pertussis (BX470248) BP3756
NP_891377.1	ortholog of Bordetella pertussis (BX470248) BP3757
NP_891378.1	ortholog of Bordetella pertussis (BX470248) BP3758
NP_891379.1	ortholog of Bordetella pertussis (BX470248) BP3759
NP_891380.1	ortholog of Bordetella pertussis (BX470248) BP3760
NP_891381.1	ortholog of Bordetella pertussis (BX470248) BP3761
NP_891382.1	ortholog of Bordetella pertussis (BX470248) BP3762
NP_891383.1	ortholog of Bordetella pertussis (BX470248) BP3764
NP_891384.1	ortholog of Bordetella pertussis (BX470248) BP3765
NP_891385.1	adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active
NP_891386.1	short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ
NP_891387.1	catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer
NP_891388.1	catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis
NP_891389.1	catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis
NP_891390.1	with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide
NP_891391.2	catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide
NP_891392.1	catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase
NP_891393.1	PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers
NP_891394.1	catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis
NP_891395.1	ortholog of Bordetella pertussis (BX470248) BP3776
NP_891396.1	TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes
NP_891397.1	ortholog of Bordetella pertussis (BX470248) BP3778
NP_891398.1	ortholog of Bordetella pertussis (BX470248) BP3779
NP_891400.1	ortholog of Bordetella pertussis (BX470248) BP0280
NP_891401.1	ortholog of Bordetella pertussis (BX470248) BP0279
NP_891402.1	homopentamer; channel that opens in response to pressure or hypoosmotic shock
NP_891403.1	ortholog of Bordetella pertussis (BX470248) BP0277
NP_891404.1	ortholog of Bordetella pertussis (BX470248) BP0276
NP_891405.1	ortholog of Bordetella pertussis (BX470248) BP0275
NP_891406.1	ortholog of Bordetella pertussis (BX470248) BP0274
NP_891407.1	ortholog of Bordetella pertussis (BX470248) BP0273
NP_891410.1	ortholog of Bordetella pertussis (BX470248) BP2856
NP_891422.1	ortholog of Bordetella pertussis (BX470248) BP3782
NP_891423.1	ortholog of Bordetella pertussis (BX470248) BP3783
NP_891424.1	ortholog of Bordetella pertussis (BX470248) BP3784
NP_891425.1	ortholog of Bordetella pertussis (BX470248) BP3785
NP_891426.1	ortholog of Bordetella pertussis (BX470248) BP3786
NP_891427.1	ortholog of Bordetella pertussis (BX470248) BP3787
NP_891428.1	ortholog of Bordetella pertussis (BX470248) BP3788
NP_891429.1	ortholog of Bordetella pertussis (BX470248) BP3789
NP_891430.1	ortholog of Bordetella pertussis (BX470248) BP3790
NP_891431.1	ortholog of Bordetella pertussis (BX470248) BP3791
NP_891432.1	ortholog of Bordetella pertussis (BX470248) BP3792
NP_891433.1	ortholog of Bordetella pertussis (BX470248) BP3793
NP_891434.1	ortholog of Bordetella pertussis (BX470248) BP3794
NP_891435.1	ortholog of Bordetella pertussis (BX470248) BP3795
NP_891436.1	ortholog of Bordetella pertussis (BX470248) BP3796
NP_891437.1	ortholog of Bordetella pertussis (BX470248) BP3797
NP_891438.1	ortholog of Bordetella pertussis (BX470248) BP3798
NP_891439.1	ortholog of Bordetella pertussis (BX470248) BP3799
NP_891440.1	ortholog of Bordetella pertussis (BX470248) BP3800
NP_891441.1	ortholog of Bordetella pertussis (BX470248) BP3801
NP_891442.1	ortholog of Bordetella pertussis (BX470248) BP3802
NP_891443.1	ortholog of Bordetella pertussis (BX470248) BP3803
NP_891444.1	ortholog of Bordetella pertussis (BX470248) BP3804
NP_891445.1	ortholog of Bordetella pertussis (BX470248) BP3805+BP0167
NP_891446.1	ortholog of Bordetella pertussis (BX470248) BP0168
NP_891447.1	ortholog of Bordetella pertussis (BX470248) BP0169
NP_891448.1	ortholog of Bordetella pertussis (BX470248) BP0170
NP_891449.1	ortholog of Bordetella pertussis (BX470248) BP0171
NP_891450.1	stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein
NP_891451.1	ortholog of Bordetella pertussis (BX470248) BP0173
NP_891452.1	ortholog of Bordetella pertussis (BX470248) BP0174
NP_891453.1	ortholog of Bordetella pertussis (BX470248) BP0136
NP_891454.1	ortholog of Bordetella pertussis (BX470248) BP0135
NP_891455.1	ortholog of Bordetella pertussis (BX470248) BP0134
NP_891456.1	ortholog of Bordetella pertussis (BX470248) BP0133
NP_891457.1	ortholog of Bordetella pertussis (BX470248) BP0132
NP_891458.1	ortholog of Bordetella pertussis (BX470248) BP0131
NP_891459.1	ortholog of Bordetella pertussis (BX470248) BP0130
NP_891460.1	ortholog of Bordetella pertussis (BX470248) BP0129
NP_891461.1	ortholog of Bordetella pertussis (BX470248) BP0128
NP_891462.1	ortholog of Bordetella pertussis (BX470248) BP0127
NP_891463.1	ortholog of Bordetella pertussis (BX470248) BP0126
NP_891464.1	ortholog of Bordetella pertussis (BX470248) BP0125
NP_891465.1	ortholog of Bordetella pertussis (BX470248) BP0123
NP_891466.1	ortholog of Bordetella pertussis (BX470248) BP0122
NP_891467.1	ortholog of Bordetella pertussis (BX470248) BP0121
NP_891468.1	ortholog of Bordetella pertussis (BX470248) BP0120
NP_891469.1	ortholog of Bordetella pertussis (BX470248) BP0119
NP_891470.1	ortholog of Bordetella pertussis (BX470248) BP0117
NP_891471.1	ortholog of Bordetella pertussis (BX470248) BP0116
NP_891472.1	catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase
NP_891473.1	ortholog of Bordetella pertussis (BX470248) BP0114
NP_891474.1	ortholog of Bordetella pertussis (BX470248) BP0113
NP_891475.1	ortholog of Bordetella pertussis (BX470248) BP0112
NP_891476.1	ortholog of Bordetella pertussis (BX470248) BP0111
NP_891477.1	ortholog of Bordetella pertussis (BX470248) BP0442
NP_891478.1	ortholog of Bordetella pertussis (BX470248) BP0441
NP_891479.1	ortholog of Bordetella pertussis (BX470248) BP0440+BP0444
NP_891480.1	catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity; unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol
NP_891481.1	ortholog of Bordetella pertussis (BX470248) BP0447
NP_891482.1	ortholog of Bordetella pertussis (BX470248) BP0448
NP_891483.1	ortholog of Bordetella pertussis (BX470248) BP0449
NP_891484.1	ortholog of Bordetella pertussis (BX470248) BP0450
NP_891485.1	DapATase; functions in arginine biosynthetic pathway; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine
NP_891486.1	ortholog of Bordetella pertussis (BX470248) BP0452
NP_891487.1	ortholog of Bordetella pertussis (BX470248) BP0453
NP_891488.1	ortholog of Bordetella pertussis (BX470248) BP0454
NP_891489.1	ortholog of Bordetella pertussis (BX470248) BP0455
NP_891490.1	ortholog of Bordetella pertussis (BX470248) BP0456
NP_891491.1	ortholog of Bordetella pertussis (BX470248) BP0457
NP_891492.1	ortholog of Bordetella pertussis (BX470248) BP0458
NP_891493.1	ortholog of Bordetella pertussis (BX470248) BP0459
NP_891494.1	decatenates replicating daughter chromosomes
NP_891495.1	ortholog of Bordetella pertussis (BX470248) BP0461
NP_891496.1	ortholog of Bordetella pertussis (BX470248) BP0462
NP_891497.1	ortholog of Bordetella pertussis (BX470248) BP0463
NP_891498.1	Involved in the nonphosphorylative, ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate
NP_891499.1	ortholog of Bordetella pertussis (BX470248) BP0465
NP_891500.1	Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
NP_891501.1	ortholog of Bordetella pertussis (BX470248) BP0467
NP_891502.1	ortholog of Bordetella pertussis (BX470248) BP0468
NP_891503.1	ortholog of Bordetella pertussis (BX470248) BP0469
NP_891504.1	ortholog of Bordetella pertussis (BX470248) BP0470
NP_891505.1	DHBP synthase; functions during riboflavin biosynthesis
NP_891506.1	ortholog of Bordetella pertussis (BX470248) BP0472
NP_891509.1	ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis
NP_891512.1	ortholog of Bordetella pertussis (BX470248) BP0482
NP_891513.1	ortholog of Bordetella pertussis (BX470248) BP0483
NP_891514.1	ortholog of Bordetella pertussis (BX470248) BP0484
NP_891515.1	catalyzes the hydrolysis of acylphosphate
NP_891516.1	ortholog of Bordetella pertussis (BX470248) BP0486
NP_891517.1	ortholog of Bordetella pertussis (BX470248) BP0487
NP_891518.1	ortholog of Bordetella pertussis (BX470248) BP0488
NP_891519.1	no significant database matches
NP_891520.1	no significant database matches
NP_891521.1	negatively supercoils closed circular double-stranded DNA
NP_891522.1	binds the polymerase to DNA and acts as a sliding clamp
NP_891523.1	binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.
NP_891524.1	in Escherichia coli transcription of this gene is enhanced by polyamines
NP_891525.1	protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates
NP_891526.1	ortholog of Bordetella pertussis (BX470248) BP0494
NP_891527.2	functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria
NP_891528.1	ortholog of Bordetella pertussis (BX470248) BP3852
NP_891529.1	ortholog of Bordetella pertussis (BX470248) BP3853
NP_891530.1	ortholog of Bordetella pertussis (BX470248) BP3854
NP_891531.1	ortholog of Bordetella pertussis (BX470248) BP3855
NP_891532.1	ortholog of Bordetella pertussis (BX470248) BP3856
NP_891533.1	ortholog of Bordetella pertussis (BX470248) BP3857
NP_891534.1	ortholog of Bordetella pertussis (BX470248) BP3858
NP_891535.1	ortholog of Bordetella pertussis (BX470248) BP3859
NP_891536.1	ortholog of Bordetella pertussis (BX470248) BP3860
NP_891537.1	ortholog of Bordetella pertussis (BX470248) BP3861
NP_891538.1	ortholog of Bordetella pertussis (BX470248) BP3862
NP_891539.1	in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE
NP_891540.1	ortholog of Bordetella pertussis (BX470248) BP3864
NP_891541.1	ortholog of Bordetella pertussis (BX470248) BP3865
NP_891542.1	ortholog of Bordetella pertussis (BX470248) BP3866
NP_891543.1	ortholog of Bordetella pertussis (BX470248) BP3867
NP_891544.1	ortholog of Bordetella pertussis (BX470248) BP3868
NP_891545.1	ortholog of Bordetella pertussis (BX470248) BP3869
NP_891546.1	catalyzes the transfer of an amino moiety
NP_891547.1	ortholog of Bordetella pertussis (BX470248) BP3871