-- dump date 20240506_034042 -- class Genbank::Contig -- table contig_comment -- id comment NZ_CP025070.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP025070.1.REFSEQ INFORMATION: The reference sequence is identical to CP025070.1. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP025070.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP025070.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP025070.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria available from Margaret Williams.REFSEQ INFORMATION: The reference sequence is identical to CP025070.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria available from Margaret Williams. ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP025070.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria available from Margaret Williams. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3REFSEQ INFORMATION: The reference sequence is identical to CP025070.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria available from Margaret Williams. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 287xREFSEQ INFORMATION: The reference sequence is identical to CP025070.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria available from Margaret Williams. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 287x Sequencing Technology :: PacBio RSII; Illumina MiSeqREFSEQ INFORMATION: The reference sequence is identical to CP025070.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria available from Margaret Williams. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 287x Sequencing Technology :: PacBio RSII; Illumina MiSeq ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP025070.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria available from Margaret Williams. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 287x Sequencing Technology :: PacBio RSII; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP025070.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria available from Margaret Williams. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 287x Sequencing Technology :: PacBio RSII; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP025070.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria available from Margaret Williams. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 287x Sequencing Technology :: PacBio RSII; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/19/2024 02:15:51REFSEQ INFORMATION: The reference sequence is identical to CP025070.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria available from Margaret Williams. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 287x Sequencing Technology :: PacBio RSII; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/19/2024 02:15:51 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP025070.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria available from Margaret Williams. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 287x Sequencing Technology :: PacBio RSII; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/19/2024 02:15:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP025070.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria available from Margaret Williams. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 287x Sequencing Technology :: PacBio RSII; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/19/2024 02:15:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP025070.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria available from Margaret Williams. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 287x Sequencing Technology :: PacBio RSII; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/19/2024 02:15:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP025070.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria available from Margaret Williams. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 287x Sequencing Technology :: PacBio RSII; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/19/2024 02:15:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP025070.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria available from Margaret Williams. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 287x Sequencing Technology :: PacBio RSII; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/19/2024 02:15:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP025070.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria available from Margaret Williams. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 287x Sequencing Technology :: PacBio RSII; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/19/2024 02:15:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,517REFSEQ INFORMATION: The reference sequence is identical to CP025070.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria available from Margaret Williams. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 287x Sequencing Technology :: PacBio RSII; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/19/2024 02:15:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,517 CDSs (total) :: 4,450REFSEQ INFORMATION: The reference sequence is identical to CP025070.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria available from Margaret Williams. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 287x Sequencing Technology :: PacBio RSII; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/19/2024 02:15:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,517 CDSs (total) :: 4,450 Genes (coding) :: 4,228REFSEQ INFORMATION: The reference sequence is identical to CP025070.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria available from Margaret Williams. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 287x Sequencing Technology :: PacBio RSII; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/19/2024 02:15:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,517 CDSs (total) :: 4,450 Genes (coding) :: 4,228 CDSs (with protein) :: 4,228REFSEQ INFORMATION: The reference sequence is identical to CP025070.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria available from Margaret Williams. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 287x Sequencing Technology :: PacBio RSII; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/19/2024 02:15:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,517 CDSs (total) :: 4,450 Genes (coding) :: 4,228 CDSs (with protein) :: 4,228 Genes (RNA) :: 67REFSEQ INFORMATION: The reference sequence is identical to CP025070.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria available from Margaret Williams. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 287x Sequencing Technology :: PacBio RSII; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/19/2024 02:15:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,517 CDSs (total) :: 4,450 Genes (coding) :: 4,228 CDSs (with protein) :: 4,228 Genes (RNA) :: 67 rRNAs :: 3, 3, 3 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP025070.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria available from Margaret Williams. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 287x Sequencing Technology :: PacBio RSII; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/19/2024 02:15:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,517 CDSs (total) :: 4,450 Genes (coding) :: 4,228 CDSs (with protein) :: 4,228 Genes (RNA) :: 67 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP025070.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria available from Margaret Williams. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 287x Sequencing Technology :: PacBio RSII; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/19/2024 02:15:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,517 CDSs (total) :: 4,450 Genes (coding) :: 4,228 CDSs (with protein) :: 4,228 Genes (RNA) :: 67 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 54REFSEQ INFORMATION: The reference sequence is identical to CP025070.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria available from Margaret Williams. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 287x Sequencing Technology :: PacBio RSII; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/19/2024 02:15:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,517 CDSs (total) :: 4,450 Genes (coding) :: 4,228 CDSs (with protein) :: 4,228 Genes (RNA) :: 67 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 54 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to CP025070.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria available from Margaret Williams. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 287x Sequencing Technology :: PacBio RSII; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/19/2024 02:15:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,517 CDSs (total) :: 4,450 Genes (coding) :: 4,228 CDSs (with protein) :: 4,228 Genes (RNA) :: 67 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 54 ncRNAs :: 4 Pseudo Genes (total) :: 222REFSEQ INFORMATION: The reference sequence is identical to CP025070.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria available from Margaret Williams. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 287x Sequencing Technology :: PacBio RSII; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/19/2024 02:15:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,517 CDSs (total) :: 4,450 Genes (coding) :: 4,228 CDSs (with protein) :: 4,228 Genes (RNA) :: 67 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 54 ncRNAs :: 4 Pseudo Genes (total) :: 222 CDSs (without protein) :: 222REFSEQ INFORMATION: The reference sequence is identical to CP025070.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria available from Margaret Williams. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 287x Sequencing Technology :: PacBio RSII; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/19/2024 02:15:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,517 CDSs (total) :: 4,450 Genes (coding) :: 4,228 CDSs (with protein) :: 4,228 Genes (RNA) :: 67 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 54 ncRNAs :: 4 Pseudo Genes (total) :: 222 CDSs (without protein) :: 222 Pseudo Genes (ambiguous residues) :: 0 of 222REFSEQ INFORMATION: The reference sequence is identical to CP025070.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria available from Margaret Williams. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 287x Sequencing Technology :: PacBio RSII; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/19/2024 02:15:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,517 CDSs (total) :: 4,450 Genes (coding) :: 4,228 CDSs (with protein) :: 4,228 Genes (RNA) :: 67 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 54 ncRNAs :: 4 Pseudo Genes (total) :: 222 CDSs (without protein) :: 222 Pseudo Genes (ambiguous residues) :: 0 of 222 Pseudo Genes (frameshifted) :: 128 of 222REFSEQ INFORMATION: The reference sequence is identical to CP025070.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria available from Margaret Williams. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 287x Sequencing Technology :: PacBio RSII; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/19/2024 02:15:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,517 CDSs (total) :: 4,450 Genes (coding) :: 4,228 CDSs (with protein) :: 4,228 Genes (RNA) :: 67 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 54 ncRNAs :: 4 Pseudo Genes (total) :: 222 CDSs (without protein) :: 222 Pseudo Genes (ambiguous residues) :: 0 of 222 Pseudo Genes (frameshifted) :: 128 of 222 Pseudo Genes (incomplete) :: 40 of 222REFSEQ INFORMATION: The reference sequence is identical to CP025070.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria available from Margaret Williams. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 287x Sequencing Technology :: PacBio RSII; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/19/2024 02:15:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,517 CDSs (total) :: 4,450 Genes (coding) :: 4,228 CDSs (with protein) :: 4,228 Genes (RNA) :: 67 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 54 ncRNAs :: 4 Pseudo Genes (total) :: 222 CDSs (without protein) :: 222 Pseudo Genes (ambiguous residues) :: 0 of 222 Pseudo Genes (frameshifted) :: 128 of 222 Pseudo Genes (incomplete) :: 40 of 222 Pseudo Genes (internal stop) :: 67 of 222REFSEQ INFORMATION: The reference sequence is identical to CP025070.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria available from Margaret Williams. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 287x Sequencing Technology :: PacBio RSII; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/19/2024 02:15:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,517 CDSs (total) :: 4,450 Genes (coding) :: 4,228 CDSs (with protein) :: 4,228 Genes (RNA) :: 67 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 54 ncRNAs :: 4 Pseudo Genes (total) :: 222 CDSs (without protein) :: 222 Pseudo Genes (ambiguous residues) :: 0 of 222 Pseudo Genes (frameshifted) :: 128 of 222 Pseudo Genes (incomplete) :: 40 of 222 Pseudo Genes (internal stop) :: 67 of 222 Pseudo Genes (multiple problems) :: 13 of 222REFSEQ INFORMATION: The reference sequence is identical to CP025070.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria available from Margaret Williams. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 287x Sequencing Technology :: PacBio RSII; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/19/2024 02:15:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,517 CDSs (total) :: 4,450 Genes (coding) :: 4,228 CDSs (with protein) :: 4,228 Genes (RNA) :: 67 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 54 ncRNAs :: 4 Pseudo Genes (total) :: 222 CDSs (without protein) :: 222 Pseudo Genes (ambiguous residues) :: 0 of 222 Pseudo Genes (frameshifted) :: 128 of 222 Pseudo Genes (incomplete) :: 40 of 222 Pseudo Genes (internal stop) :: 67 of 222 Pseudo Genes (multiple problems) :: 13 of 222 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP025070.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria available from Margaret Williams. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 287x Sequencing Technology :: PacBio RSII; Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/19/2024 02:15:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,517 CDSs (total) :: 4,450 Genes (coding) :: 4,228 CDSs (with protein) :: 4,228 Genes (RNA) :: 67 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 54 ncRNAs :: 4 Pseudo Genes (total) :: 222 CDSs (without protein) :: 222 Pseudo Genes (ambiguous residues) :: 0 of 222 Pseudo Genes (frameshifted) :: 128 of 222 Pseudo Genes (incomplete) :: 40 of 222 Pseudo Genes (internal stop) :: 67 of 222 Pseudo Genes (multiple problems) :: 13 of 222 ##Genome-Annotation-Data-END## COMPLETENESS: full length.